CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134537	Corynebacterium diphtheriae strain NCTC7838 genome assembly, chromosome: 1	1 crisprs	csa3,cas3,DEDDh,WYL,cas4,DinG,cas9,cas1,cas2	0	2	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134537_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134537_1

2326435-2326917

TypeII

Consensus_repeat	Method
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	PILER-CR
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	CRT

7 spacers

cas2,cas1,cas9

The CRISPR arrays of LR134537_1

>merge|LR134537|1|2326435-2326917|PILER-CR,CRT
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGCATGAATTTGCAGCACGCTTACTCATTTCGAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGCTTTCTTTCGGGTTGAATGGGTGCGCTGAGAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGCCTTCTACTGTCCCCACGAGGTCTGGGACGAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGCAACATTGTCTGCGGTGAAATCTGGGGCTGAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGCATGAATTTGCAGCACGCTTACTCATTTCGAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGCTTTCTTTCGGGTTGAATGGGTGCGCTGAGAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGCCCGCACCAGCGGGGATGAACCGTAGGAGAAGTTTATCAGGGTTTTTGGGAATGAGGGTGCCTG

>LR134537|1|1|2326435-2326854|PILER-CR
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	ATGAATTTGCAGCACGCTTACTCATTTC
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	TTTCTTTCGGGTTGAATGGGTGCGCTGA
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	CTTCTACTGTCCCCACGAGGTCTGGGAC
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	AACATTGTCTGCGGTGAAATCTGGGGCT
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	ATGAATTTGCAGCACGCTTACTCATTTC
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	TTTCTTTCGGGTTGAATGGGTGCGCTGA
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC

>LR134537|1|1|2326435-2326917|CRT
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	ATGAATTTGCAGCACGCTTACTCATTTC
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	TTTCTTTCGGGTTGAATGGGTGCGCTGA
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	CTTCTACTGTCCCCACGAGGTCTGGGAC
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	AACATTGTCTGCGGTGAAATCTGGGGCT
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	ATGAATTTGCAGCACGCTTACTCATTTC
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	TTTCTTTCGGGTTGAATGGGTGCGCTGA
GAAGTCTATCAGGGTTTTTGAGAACTGAACCCCAGC	CCGCACCAGCGGGGATGAACCGTAGGA
GAAGTTTATCAGGGTTTTTGGGAATGAGGGTGCCTG

Protein	Signature genes	Signature genes Name	Protein_function
LR134537.1\|VEJ64952.1\|2320936_2321422_+\|transposase-like-protein	unknown	unknown	unknown
LR134537.1\|VEJ64950.1\|2318920_2319931_+\|thiamine-biosynthesis-protein-ThiF	unknown	unknown	gnl\|CDD\|235528
LR134537.1\|VEJ64958.1\|2328818_2329088_-\|putative-septation-inhibitor-protein	unknown	unknown	gnl\|CDD\|178907
LR134537.1\|VEJ64948.1\|2317933_2318134_+\|thiamine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|273754
LR134537.1\|VEJ64965.1\|2337512_2338379_-\|putative-FHA-domain-protein	unknown	unknown	gnl\|CDD\|378850
LR134537.1\|VEJ64960.1\|2331210_2332737_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
LR134537.1\|VEJ64954.1\|2321898_2325153_+\|CRISPR-associated-endonuclease	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375896
LR134537.1\|VEJ64955.1\|2325156_2326071_+\|CRISPR-associated-protein	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
LR134537.1\|VEJ64947.1\|2316861_2317950_+\|putative-thiamine-biosynthesis-oxidoreductase	unknown	unknown	gnl\|CDD\|274092
LR134537.1\|VEJ64959.1\|2329204_2331214_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
LR134537.1\|VEJ64951.1\|2319927_2320782_+\|multifunctional-thiamine-phosphate-pyrophosphorylase	unknown	unknown	gnl\|CDD\|237797
LR134537.1\|VEJ64962.1\|2334206_2335556_-\|cell-division-protein	unknown	unknown	gnl\|CDD\|223843
LR134537.1\|VEJ64957.1\|2327387_2328176_+\|transposase-like-protein	unknown	unknown	gnl\|CDD\|307151
LR134537.1\|VEJ64953.1\|2321653_2321818_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134537.1\|VEJ64961.1\|2332749_2334210_-\|putative-secreted-penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
LR134537.1\|VEJ64964.1\|2337010_2337499_-\|putative-secreted-protein	unknown	unknown	gnl\|CDD\|224630
LR134537.1\|VEJ64956.1\|2326054_2326384_+\|CRISPR-associated-protein	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LR134537.1\|VEJ64966.1\|2338888_2339188_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134537.1\|VEJ64949.1\|2318135_2318921_+\|thiazole-synthase	unknown	unknown	gnl\|CDD\|234687
LR134537.1\|VEJ64963.1\|2335556_2337011_-\|phosphoprotein-phosphatase	unknown	unknown	gnl\|CDD\|223704

Protein	Function_ID	Function_description	E-value
LR134537.1\|VEJ64950.1\|2318920_2319931_+\|thiamine-biosynthesis-protein-ThiF	gnl\|CDD\|235528	PRK05600, PRK05600, thiamine biosynthesis protein ThiF; Validated.	0
LR134537.1\|VEJ64965.1\|2337512_2338379_-\|putative-FHA-domain-protein	gnl\|CDD\|378850	pfam12401, DUF3662, Protein of unknown function (DUF2662). This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with pfam00498.	6.35939e-42
LR134537.1\|VEJ64958.1\|2328818_2329088_-\|putative-septation-inhibitor-protein	gnl\|CDD\|178907	PRK00159, PRK00159, putative septation inhibitor protein; Reviewed.	2.52021e-46
LR134537.1\|VEJ64948.1\|2317933_2318134_+\|thiamine-biosynthesis-protein	gnl\|CDD\|273754	TIGR01683, thiamine_biosynthesis_protein_ThiS, thiamine biosynthesis protein ThiS. This model represents ThiS, a small, ubiquitin-like thiamine biosynthesis protein related to MoaD, a molybdenum cofactor biosynthesis protein. Both proteins are involved in sulfur transfer. ThiS has a conserved Gly-Gly C-terminus that is modified, in reactions requiring ThiI, ThiF, IscS, and a sulfur atom from Cys, into the thiocarboxylate that provides the sulfur for thiazole biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	6.72491e-21
LR134537.1\|VEJ64960.1\|2331210_2332737_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.43887e-107
LR134537.1\|VEJ64947.1\|2316861_2317950_+\|putative-thiamine-biosynthesis-oxidoreductase	gnl\|CDD\|274092	TIGR02352, Glycine_oxidase, glycine oxidase ThiO. This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	1.73933e-126
LR134537.1\|VEJ64949.1\|2318135_2318921_+\|thiazole-synthase	gnl\|CDD\|234687	PRK00208, thiG, thiazole synthase; Reviewed.	3.14528e-148
LR134537.1\|VEJ64954.1\|2321898_2325153_+\|CRISPR-associated-endonuclease	gnl\|CDD\|375896	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain. This is an alpha-helical lobe domain found in Cas9 proteins. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. Amino acid residues located in both the nuclease and alpha-helical lobe clefts are highly conserved within type II-A Cas9 proteins.	2.31724e-122
LR134537.1\|VEJ64959.1\|2329204_2331214_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.17363e-122
LR134537.1\|VEJ64951.1\|2319927_2320782_+\|multifunctional-thiamine-phosphate-pyrophosphorylase	gnl\|CDD\|237797	PRK14713, PRK14713, bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase.	6.85188e-108
LR134537.1\|VEJ64957.1\|2327387_2328176_+\|transposase-like-protein	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	7.90641e-45
LR134537.1\|VEJ64955.1\|2325156_2326071_+\|CRISPR-associated-protein	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.3199e-113
LR134537.1\|VEJ64961.1\|2332749_2334210_-\|putative-secreted-penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	3.99976e-83
LR134537.1\|VEJ64964.1\|2337010_2337499_-\|putative-secreted-protein	gnl\|CDD\|224630	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms].	1.18346e-17
LR134537.1\|VEJ64956.1\|2326054_2326384_+\|CRISPR-associated-protein	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.12332e-19
LR134537.1\|VEJ64962.1\|2334206_2335556_-\|cell-division-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	2.78845e-82
LR134537.1\|VEJ64963.1\|2335556_2337011_-\|phosphoprotein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.91764e-73

>LR134537.1|VEJ64956.1|2326054_2326384_+|CRISPR-associated-protein
MPKKGSDPVWCVVMFDLPVKTKTQRKQATAFRQNLLDLGFCMAQLSVYVQYLPLAAKLSNLVKLIKEKLPPGGDVRILSVSDIQWSKMIRFSSSAEVSGEEKPDQLAIF
>LR134537.1|VEJ64955.1|2325156_2326071_+|CRISPR-associated-protein
MNPGWRVVDLIDFDGKVSYQRGQFAITSDSGELRATLPLAQIAVVLIGNKIIISGAVLVKLSEYDIAVLVCDWRRVPVAGSFSWNEHTRIAARQRAQASLSLPRQKSAWAQIIKAKILGQARTAAQLGFDATDLKNLARAVRSGDVDNREAMAAKRYWEIISTEDDFRRLPGLAATGWNGALDYAYTVLRGHGMRAICSAGLVGTLGVFHHGRGNQFALVDDLIEPFRPAIDYAVFSIVSNAQELDKETKRQLVAAVEEPFNSAGQSIPTVFTAFAQQYGRYVEGDVEKLVPPIWEGPFDAEER
>LR134537.1|VEJ64954.1|2321898_2325153_+|CRISPR-associated-endonuclease
MKYHVGIDVGTFSVGLAAIEVDDAGMPIKTLSLVSHIHDSGLDPDKIKSAVTRLASSGIARRTRRLYRRKRRRLQQLDKFIQRQGWPVIELEDYSDPLYPWKVRAELAASYIADEKERGEKLSVALRHIARHRGWRNPYAKVSSLYLPDEPSDAFKAIREEIKRASGQPVPETATVGQMVTLCELGTLKLRGEGGVLSARLQQSDHAREIQEICRMQEIGQELYRKIIDVVFAAESPKGSASSRVGKDPLQPGKNRALKASDAFQRYRIAALIGNLRVRVDGEKRILSVEEKNLVFDHLVNLAPKKEPEWVTIAEILGIDRGQLIGTATMTDDGERAGARPPTHDTNRSIVNSRIAPLVDWWKTASALEQHAMVKALSNAEVDDFDSPEGAKVQAFFADLDDDVHAKLDSLHLPVGRAAYSEDTLVRLTRRMLADGVDLYTARLQEFGIEPSWTPPAPRIGEPVGNPAVDRVLKTVSRWLESATKTWGAPERVIIEHVREGFVTEKRAREMDGDMRRRAARNAKLFQEMQEKLNVQGKPSRADLWRYQSVQRQNCQCAYCGSPITFSNSEMDHIVPRAGQGSTNTRENLVAVCHRCNQSKGNTPFAIWAKNTSIEGVSVKEAVERTRHWVTDTGMRSTDFKKFTKAVVERFQRATMDEEIDARSMESVAWMANELRSRVAQHFASHGTTVRVYRGSLTAEARRASGISGKLEFLDGVGKSRLDRQHHAIDAAVIAFTSDYVAETLAVRSNLKQSQAHRQEAPQWREFTGKDAEHRAAWRVWCQKMEKLSALLTEDLRDDRVVVMSNVRLRLGNGSAHEETIGKLSKVKLGSQLSVSDIDKASSEALWCALTREPDFDPKDGLPANPERHIRVNGTHVYAGDNIGLFPVSAGSIALRGGYAELGSSFHHARVYKITSGKKPAFAMLRVYTIDLLPYRNQDLFSVELKPQTMSMRQAEKKLRDALATGNAEYLGWLVVDDELVVDTSKIATDQVKAVEAELGTIRRWRVDGFFGDTRLRLRPLQMSKEGIKKESAPELSKIIDRPGWLPAVNKLFSEGNVTVVRRDSLGRVRLESTAHLPVTWKVQ
>LR134537.1|VEJ64953.1|2321653_2321818_-|Uncharacterised-protein
MLTEVQFYLIKLVTYQKLGNRFSIFTPLTHPINYNAVIPVAPPRVFLRAQLHLI
>LR134537.1|VEJ64952.1|2320936_2321422_+|transposase-like-protein
MQPNGNVIVIEAEPINEYLTCGQPKVLRDHVIHSLVDLPIIDHPTRIYVRLPRYRCTNKRCLQKTFHTGLACALDNSKTTNRVTHWILQRLSLSRCSRRDLQRQALHLVVPDPRRQHPTHNQCTLKPEEPLNGGISKDFSWHFTPNRPFGQIWCEVPSFRG
>LR134537.1|VEJ64951.1|2319927_2320782_+|multifunctional-thiamine-phosphate-pyrophosphorylase
MTPHILTIAGSDPSGGAGIQADLKSIMAAGGYGMAAITALTAQNTCGVTAIHTPPTEFLSEQLRAISDDITIHAIKIGMIGSSDAATAIATWLDQLHHTSIVVLDPVMVATSGSVLGQRHYFEPLLHHATVITPNLPELAALTNNHDPEQTEHAARSLAEQYDCAVLLKGGHRHGTNDLGNTWITASGPQFHAPSPRIHTTNTHGTGCSLSSALATRLAIEPPEPALHWATTWLNGAIAHGSDLNVGHGNGPVDHSYRLEEYSANCNTHPKNSRRATFNMAPQL
>LR134537.1|VEJ64950.1|2318920_2319931_+|thiamine-biosynthesis-protein-ThiF
MLDELERQRVARQLRLPGFGIEQQEKLNKGRVLVIGVGGLGSPALQSLAAAGVGSIRLVDNDTVDVSNIQRQILFGVGDVGRSKVHVAAERLRAIQPGIRIDARTERLTAHNAHELAEGCDVILDGSDTFATKFLCGDLAEITGIPLVWGSVLQFEGHMGVFTREVGLRDLFPEAPTQGLNCADAGVLGATTAVIANLMATETIKILAGIGTVQPGAITTYNALTSTFRTYTVGRDPLRPAARTLHTLTLPNEYELIDVREPHEIEHTPSGAHITLPQSMWNDTTAIQHALDNITTDNVVVVCASGIRSAAFIEQFAHLNPHLTFHNVPSGINELP
>LR134537.1|VEJ64949.1|2318135_2318921_+|thiazole-synthase
MLTIADRSFQSHLIMGTGGASSFDTLEKSLIASGTELTTVAMRRHAAHTGAHGESVFELMQRLNITPLPNTAGCRTARDAILTAQLAREALDTSWIKVEVIADDTTLLPDVLELIDATETLTNDGFTVLAYTSDDPVVAQRLEDAGAAAVMPLGSPIGTGLGILNPHNIELICSRASVPVLLDAGIGTASDATLAMELGCSGVLLASAINRCINPITMATAMKHAVEAGRLAREAGRIPRREHAVASSSFEGLASWADEVL
>LR134537.1|VEJ64948.1|2317933_2318134_+|thiamine-biosynthesis-protein
MNIYINDTPTAIESPQLTDIISNHCNGIRPGIAVAINQRVIPRSQWDTTTVTAGDHLDILTAVQGG
>LR134537.1|VEJ64947.1|2316861_2317950_+|putative-thiamine-biosynthesis-oxidoreductase
MKIAVVGGGIVGLSTAFELSSRGHSVHVFDPNPASGASHFAGGMLAPAAEVQFQQDPLFPLMKCAGKLWPDMVRRVAQHTSLPTGYRTEGTLVVAADRADAEHLKQLRATQEAAGMDVRPITTRQARGLEPALGPRLSAAVHIPNDNQVAPRVFLTALLDALDDCGVEVIKEEITDLEPLYQQFEVVVLAAGLGAQHLSPIPLALRPVRGDILRVQTEPGAVNMVVRGWVNDHPIYIIPRANGEIAIGATSREDERDLPSVEGIYDLLRDAVRVVPGIVDSSLIEANVGVRPGTPDDLPYLGWASDRLIISTGYFRHGILLSALGAHVTACLIDGTDPGIDLTACAPDRHHNERGTTHEHLH
>LR134537.1|VEJ64957.1|2327387_2328176_+|transposase-like-protein
MIFLDTLCIKVRDGGRVVNKSAYMAIGVDIEGIKHILGLWIAKEKGASFWVQVCSNLSNRGVKDVFIVCCDGLKGLPEAVEVTWPGPMVQTCVVHLIRVANLWVACGDRKPVSAALKKVYTTFDEAGAVAALAEFADSELGEKYPRSVKVWCDAWERFVPFCSFRRQPAMLSTSRIRLSRLTMSCVNLPATASNFTNDESALKALWLMICNIEDKRLAKRAKEGWRVAASAGRFVEGGKVSGWKQAINQMAVAYSDRFDQYL
>LR134537.1|VEJ64958.1|2328818_2329088_-|putative-septation-inhibitor-protein
MPKSKINHSSTAYTAGSTANRTPVKINSTGTPLWYKIIMFGLILAGLLWLIVNYLAGQDISFMTELGPWNYGIGFGLFIIGLLMTMGWR
>LR134537.1|VEJ64959.1|2329204_2331214_-|serine/threonine-protein-kinase
MTDIVLADRYRLGDVIGTGGMSEVYEATDVLLGRKVAVKMLRADLARDVNFRERFRREAQNSGKLNHPAIVAVYDTGETPRAGLNTPYIVMELVNGRTLRDIVREDGPLTPSQAAHTLIPVCHALQVSHDAGIIHRDIKPANVMITNTGAVKIMDFGIARALDDATSAMTQTSAVIGTAQYLSPEQARGKLADARSDVYALGCVLYETLTGKPPFEGETPFAVAYQHVQEDPVKPSEYIADLSPTAAINVDAVVLTAMSKHPGDRYQTAQEMCADLERLERNAVTDAARHYVTPTSFATQDPASTTVVPVTQVTELDHAEAGAGVVPAGAVAGSAAVAGSGGAHAAPRSSNRGLRILAAILAVLVLAVGAGFAIDYFGGGPFSQRSTVTIPKLQNSTQQDAVSQLEKLGLQVNVIEEPNPDIPRGKVIRTNPTDGSNVQRNSTVRLTISSGKEITEVPDLSGKNTADAVKILEAAGLLLDPTVREDSSDTVPKGEIIEVSPAAGSQVSRGSKVSITVSTGVETVRVPVITGMKWDQAEGNLTSLGFKPEVVRVDSVEPAGTVVAVPDEGAEVPKGSSVTVQISNGAMFTVPEITRQTIGDAVRILHDAGWNGNASRLIQAAKVPTVAVTDQNLIASQLPTPGTALRKDAPIEIRLYEFNLAALVPPAQH
>LR134537.1|VEJ64960.1|2331210_2332737_-|serine/threonine-protein-kinase
MTQSQSPDPALQALVGSDYALQWVVGNGGMSTVWLADDLRNQREVAIKVLRPEFSDNEEFLSRFRNEALASEHIDSDNVVRTYDYREVTDDMGRTLCFIVMEYVRGESLADMLARKGRLEEDLALDVLEQAAHGLSIIHRMGMVHRDIKPGNLLITQNGQVKITDFGIAKAAAAVPLTRTGMVVGTAQYVSPEQAQGRDVTAATDVYSLGVVGYEMLVGQRPFTGDSSVSVAIAHINQAPPAMPTSVSAPARELIGIALRKDPAHRYADGNELALAVSATRMGQRPPQPKSAPLQHIAPQPAPTESTYALGATAQPTTVIPATGQVPAAPTAAPAAAAYPASTVIPAGTPRQEPEKQSSGWGAGIVVGALAALLLGTAAWAASQGMFDDLFDKTPQSSESSVPPPPVTATVTETPTPQITTVVPEPLPTSSPEPTLSETKRTPDESHPSSDHQLPSVRPSHNGRPSSQAPHAPQAPTQDADQPAESPAPDTLDSLIENLNKLNQGGAQ
>LR134537.1|VEJ64961.1|2332749_2334210_-|putative-secreted-penicillin-binding-protein-2
MNRSIRFTSVFALLLILILLVNLTIIQGFSQEKYAHNALNRRGFIELKSQARGQISTGGQVLAESYQDEEGFYQRRYVTNPAIYGPIEGYLSDIYGASGMESNLNDVLSGTDSSVSVRRWTDELLGRKHSGANVELTLLPQVQEVAYNQMANAGYEGAVVAIKPSTGEILAMASTPSYDPSAIVNPDTAEQTWAALNADPGNPLLNHATQETLPPGSTFKVITTAAGLNAGYGPGSMLTGQDRITLPDGITTLENYAGQTCAGSQNVTLATAFQYSCNTAFVQMGIDVGKEKFDEAAHAFGVNDRYDLGVDMAPGTIGDVSDPSARGQSSIGQRDVAMSVLHNAVVAATVANGGKRMEPHLVSRIVGQDLKVIKETKPHQINEAVTPEVAATLTDLMRLSERHTAGYTGADIASKTGTAEHGEDSRNSNPHAWYIAFGPSANADVAVAVVVKNGGDAGQAATGGSVAAPIGRAVIAAAQAALAARG
>LR134537.1|VEJ64962.1|2334206_2335556_-|cell-division-protein
MTFLRRITARPVEFGLLVMATLLIAVTLINLNMAQGLSVTSETLWVIGGFIGVFTIAHLALCFTAPHADQVMLPVASVLNGLGLVMVYRIDLARDTALASRQVIWTLVGILLMIAVLVFIRDHRMLSRYSYVLGLLGLILLALPMVWPTKMNADANIWISIGPFSVQPGEFSKILLLIFFAQLLVNKRALFNVAGYRFLGLEFPRLRDLGPILGVWAFAILVMAGENDFGPALLLFSTVLGMLYLATNRVSWLIIGAALVAVGGTALYQISSKIQSRVTNFINPLDNFNGTGYQLSQSLFGLSSGGVAGAGLGLGHPELIPVAESDFILAAVGEELGFIGLAAVLVLFAIFITRGLRTALRARDSYGKLMAAGLSLTLAIQVFVVTAGITALMPMTGLTTPFMSQGGSSLMANYILLGLILRISHSTQAAANDVVSMDEQAARGQEAHR
>LR134537.1|VEJ64963.1|2335556_2337011_-|phosphoprotein-phosphatase
MLRLNYAAASDRGLVRGNNEDSAYAGPHLIALADGMGGHAAGEVASQLMINHLMRLDADADDNDMLALLASVADDANRAIAQGVRDVPETDGMGTTLTALMFNGADLAMCHVGDSRGYRLRDGALEQITVDDTYVQSLVDKGQLAPEDVSTHPQRSMILKAYTGRPVEPTLKMIDIRPGDRFLLCSDGLSDPVTHSTIETTLQQGTPQEAARRLVDLALRSGGPDNVTVVVADVVEADGSDESAAAASLPVTPLTVGALNSGMPEDPRPDTAAGRAAMAITQRQPQVILPDPEPVKEATPSPRRRMVAVISALVVLAVLISAGWWGSSMVKNNYYVTTADSDSAQGALVIENGIDVSLLGKSLHSTYQFACLSPEGDLTFVDSADAEKSCHRFRLSDLKESARGQVSTLPDGSYDEVQQQLQRLAEQTLPACITRQAAHPKDKDKKKPAAPSSAAPTTTKAASPSSTGSPDDLSTPGETCREVK
>LR134537.1|VEJ64964.1|2337010_2337499_-|putative-secreted-protein
MESVIVFLLRIALLVLLWLLILLALYIQRKDAKSAAQTMVAPQAVTGLGVSSASSPLKKVSRRGGAPQQIVVVEGPLTGSSMQLDSLTEITLGRSKDCDFVVGDDYASARHARLIKRGSEWFAEDLDSRNGTYVGGYRIDQPEKVSAGSDIKIGRTTVRLVA
>LR134537.1|VEJ64965.1|2337512_2338379_-|putative-FHA-domain-protein
MSIMGKVAKLDSAMQRGLDNSFAFVFGGKLVPAEIEELLKQEVQDNIVRAYEGGVESPNVFRVRVSRKDAQNLAQRYPSLADDFADRLSRYTRNQGWSTEGPVVVTIAADSGLRTGQLHASSAFDPAPQEYSHFIGVEDDVVTAAPTNDESNYESESGMNSYDADPRTEYMTAQAPDAIYTEVPVPEPKATPTVSLLLQDGSSRTYLVEEGSNIIGRSNEAHFRLPDTGVSRQHAEITWNGRDAILTDLKSTNGTTVNDTPVENWLLEDGDVITVGHSHIEVRIVEPN
>LR134537.1|VEJ64966.1|2338888_2339188_-|Uncharacterised-protein
MKEKKLSSLVFGNVILESQILGTTIRIYADDMRSYSFRPSPYASLSVPLNELKGQLQPDHAEALAKKVFDSVAEELNKNYPGGCERAEKELKAWLMRTN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017130	Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence	124188-124214	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017130	Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence	124066-124092	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017134	Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence	124212-124238	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017134	Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence	124090-124116	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017101	Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence	124196-124222	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017101	Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence	124074-124100	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NZ_CP021924	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-2	170385-170411	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NZ_CP021924	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-2	171117-171143	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_013210	Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence	124568-124594	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_013210	Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence	124446-124472	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017136	Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence	124180-124206	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017136	Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence	124058-124084	4	0.852
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017130	Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence	123517-123543	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017134	Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence	123541-123567	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NZ_CP009803	Streptomyces sp. FR-008 plasmid pSSFR1, complete sequence	80081-80107	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017101	Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence	123525-123551	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NZ_CP020471	Rhodobacter blasticus strain 28/5 plasmid pRsa, complete sequence	88022-88048	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246793-246819	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NZ_CP021924	Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-2	170263-170289	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_013210	Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence	123897-123923	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017136	Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence	123509-123535	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	MK977714	Corynebacterium phage Bran, complete genome	22540-22566	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_048780	Corynebacterium phage StAB, complete genome	22546-22572	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	MK977706	Corynebacterium phage Dina, complete genome	22371-22397	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	MH926061	Corynebacterium phage Troy, complete genome	22111-22137	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_048789	Corynebacterium phage Stiles, complete genome	22038-22064	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_048069	Corynebacterium phage SamW, complete genome	22111-22137	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_048790	Corynebacterium phage Lederberg, complete genome	22496-22522	5	0.815
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017130	Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence	123395-123421	6	0.778
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017134	Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence	123419-123445	6	0.778
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017101	Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence	123403-123429	6	0.778
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246732-246758	6	0.778
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_013210	Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence	123775-123801	6	0.778
LR134537_1	1.7\|2326855\|27\|LR134537\|CRT	2326855-2326881	27	NC_017136	Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence	123387-123413	6	0.778
LR134537_1	1.4\|2326663\|28\|LR134537\|PILER-CR,CRT	2326663-2326690	28	NZ_CP013635	Rhizobium sp. N324 plasmid pRspN324e, complete sequence	192354-192381	7	0.75

1. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017130 (Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtaaca	Protospacer
******  ****************. *

2. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017130 (Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgca	Protospacer
******  *************** * *

3. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017134 (Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtaaca	Protospacer
******  ****************. *

4. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017134 (Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgca	Protospacer
******  *************** * *

5. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017101 (Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtaaca	Protospacer
******  ****************. *

6. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017101 (Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgca	Protospacer
******  *************** * *

7. spacer 1.7|2326855|27|LR134537|CRT matches to NZ_CP021924 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-2) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtaaca	Protospacer
******  ****************. *

8. spacer 1.7|2326855|27|LR134537|CRT matches to NZ_CP021924 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-2) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtaaca	Protospacer
******  ****************. *

9. spacer 1.7|2326855|27|LR134537|CRT matches to NC_013210 (Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtaaca	Protospacer
******  ****************. *

10. spacer 1.7|2326855|27|LR134537|CRT matches to NC_013210 (Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgca	Protospacer
******  *************** * *

11. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017136 (Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtaaca	Protospacer
******  ****************. *

12. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017136 (Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence) position: , mismatch: 4, identity: 0.852

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgca	Protospacer
******  *************** * *

13. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017130 (Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgcc	Protospacer
******  *************** *

14. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017134 (Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgcc	Protospacer
******  *************** *

15. spacer 1.7|2326855|27|LR134537|CRT matches to NZ_CP009803 (Streptomyces sp. FR-008 plasmid pSSFR1, complete sequence) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcaccagcggggatgctccgtacct	Protospacer
*****************  *****

16. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017101 (Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgcc	Protospacer
******  *************** *

17. spacer 1.7|2326855|27|LR134537|CRT matches to NZ_CP020471 (Rhodobacter blasticus strain 28/5 plasmid pRsa, complete sequence) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtatcc	Protospacer
******  ****************

18. spacer 1.7|2326855|27|LR134537|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggataaaccgttgtc	Protospacer
****.***********.****** *

19. spacer 1.7|2326855|27|LR134537|CRT matches to NZ_CP021924 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101468 plasmid pAP1468-2) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgttaaa	Protospacer
******  *************** ..*

20. spacer 1.7|2326855|27|LR134537|CRT matches to NC_013210 (Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgcc	Protospacer
******  *************** *

21. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017136 (Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgtcgcc	Protospacer
******  *************** *

22. spacer 1.7|2326855|27|LR134537|CRT matches to MK977714 (Corynebacterium phage Bran, complete genome) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggatgagccgtttgc	Protospacer
****.*************.****  *

23. spacer 1.7|2326855|27|LR134537|CRT matches to NC_048780 (Corynebacterium phage StAB, complete genome) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggatgagccgtttgc	Protospacer
****.*************.****  *

24. spacer 1.7|2326855|27|LR134537|CRT matches to MK977706 (Corynebacterium phage Dina, complete genome) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggatgagccgtttgc	Protospacer
****.*************.****  *

25. spacer 1.7|2326855|27|LR134537|CRT matches to MH926061 (Corynebacterium phage Troy, complete genome) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggatgagccgtttgc	Protospacer
****.*************.****  *

26. spacer 1.7|2326855|27|LR134537|CRT matches to NC_048789 (Corynebacterium phage Stiles, complete genome) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggatgagccgtttgt	Protospacer
****.*************.****  *

27. spacer 1.7|2326855|27|LR134537|CRT matches to NC_048069 (Corynebacterium phage SamW, complete genome) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggatgagccgtttgc	Protospacer
****.*************.****  *

28. spacer 1.7|2326855|27|LR134537|CRT matches to NC_048790 (Corynebacterium phage Lederberg, complete genome) position: , mismatch: 5, identity: 0.815

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggatgagccgtttgc	Protospacer
****.*************.****  *

29. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017130 (Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-013, complete sequence) position: , mismatch: 6, identity: 0.778

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgttcag	Protospacer
******  ***************  ..

30. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017134 (Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-012, complete sequence) position: , mismatch: 6, identity: 0.778

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgttcag	Protospacer
******  ***************  ..

31. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017101 (Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-010, complete sequence) position: , mismatch: 6, identity: 0.778

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgttcag	Protospacer
******  ***************  ..

32. spacer 1.7|2326855|27|LR134537|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 6, identity: 0.778

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcgccagcggggataaaccgtgttg	Protospacer
****.***********.******.  .

33. spacer 1.7|2326855|27|LR134537|CRT matches to NC_013210 (Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-011, complete sequence) position: , mismatch: 6, identity: 0.778

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgttcag	Protospacer
******  ***************  ..

34. spacer 1.7|2326855|27|LR134537|CRT matches to NC_017136 (Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence) position: , mismatch: 6, identity: 0.778

ccgcaccagcggggatgaaccgtagga	CRISPR spacer
ccgcacacgcggggatgaaccgttcag	Protospacer
******  ***************  ..

35. spacer 1.4|2326663|28|LR134537|PILER-CR,CRT matches to NZ_CP013635 (Rhizobium sp. N324 plasmid pRspN324e, complete sequence) position: , mismatch: 7, identity: 0.75

aacattgtctgcggtgaaatctggggct	CRISPR spacer
cgaattgactgcgatgaaatctgggggg	Protospacer
 . **** *****.************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2518 : 47716

Corynebacterium_phage(37.5%)

capsid,tRNA,holin,transposase,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ62793.1\|2518_3508_+\|capsid	putateive phage capsid protein	G9FH86	Rhodococcus_phage	2.2e-106	60.4
VEJ62794.1\|3516_3816_+	Uncharacterised protein	NA	NA	NA	NA
VEJ62795.1\|3828_4239_+	Uncharacterised protein	NA	NA	NA	NA
VEJ62796.1\|4235_4604_+	Uncharacterised protein	NA	NA	NA	NA
VEJ62797.1\|4600_4921_+	Uncharacterised protein	A0A1C9EHV8	Gordonia_phage	4.8e-15	43.7
VEJ62798.1\|4929_5373_+	Uncharacterised protein	A0A1C9EI09	Gordonia_phage	5.9e-11	28.2
VEJ62799.1\|5382_6225_+\|tail	phage major tail protein	A0A1W6JRH0	Corynebacterium_phage	5.4e-13	48.8
VEJ62800.1\|6323_6677_+	Uncharacterised protein	NA	NA	NA	NA
VEJ62801.1\|6784_7120_+	Uncharacterised protein	A0A1C9EHV2	Gordonia_phage	7.8e-08	43.5
VEJ62802.1\|7136_13310_+	immunity-specific protein Beta241	A0A166XZ24	Gordonia_phage	1.5e-88	57.0
VEJ62803.1\|13327_14110_+	immunity-specific protein Beta201	NA	NA	NA	NA
VEJ62804.1\|14110_15007_+	immunity-specific protein Beta286	Q37921	Corynephage	1.8e-51	39.7
VEJ62805.1\|14999_16124_+	immunity-specific protein beta371	Q37922	Corynephage	1.8e-85	55.8
VEJ62806.1\|16123_17332_+	laminin subunit beta-2	A0A1W6JRF8	Corynebacterium_phage	9.0e-30	40.1
VEJ62807.1\|17719_18457_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6JRK9	Corynebacterium_phage	1.6e-138	92.7
VEJ62808.1\|18456_18693_+\|holin	holin	A0A1W6JRG0	Corynebacterium_phage	2.5e-29	88.5
VEJ62809.1\|18698_19163_+	Uncharacterised protein	A0A1W6JRF4	Corynebacterium_phage	1.8e-55	72.2
VEJ62810.1\|19159_19498_+	putative secreted protein	A0A1W6JRH1	Corynebacterium_phage	1.2e-48	88.4
VEJ62811.1\|19847_21530_+	diphtheria toxin	A7UH54	Corynephage	0.0e+00	98.0
VEJ62812.1\|22091_23498_+	putative secreted polysaccharide deacetylase	NA	NA	NA	NA
VEJ62813.1\|23485_24859_-	GntR family regulator	NA	NA	NA	NA
VEJ62814.1\|24949_25843_+	pyridoxal biosynthesis lyase pdxS	NA	NA	NA	NA
VEJ62815.1\|25836_26394_+	glutamine amidotransferase involved in pyrodoxine biosynthesis	NA	NA	NA	NA
VEJ62816.1\|26390_26540_-	putative fimbrial associated sortase-like protein	NA	NA	NA	NA
VEJ62817.1\|26708_27176_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ62818.1\|27570_27831_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ62819.1\|28221_29181_-	putative fimbrial associated sortase-like protein	NA	NA	NA	NA
VEJ62820.1\|29453_29702_+	Uncharacterised protein	NA	NA	NA	NA
VEJ62821.1\|29716_31393_+	surface-anchored protein fimbrial subunit	NA	NA	NA	NA
VEJ62822.1\|31492_32431_+	putative fimbrial associated sortase-like protein	NA	NA	NA	NA
VEJ62823.1\|32402_33215_+	surface-anchored protein fimbrial subunit	NA	NA	NA	NA
VEJ62824.1\|33220_36322_+	putative surface-anchored fimbrial subunit	NA	NA	NA	NA
VEJ62825.1\|36612_36990_-	membrane protein	NA	NA	NA	NA
VEJ62826.1\|36943_37315_-	membrane protein	NA	NA	NA	NA
VEJ62827.1\|37376_37610_-	membrane protein	NA	NA	NA	NA
VEJ62828.1\|37778_38090_-\|transposase	IS element transposase	NA	NA	NA	NA
VEJ62829.1\|38860_39352_-	putative secreted protein	NA	NA	NA	NA
VEJ62830.1\|39492_40503_-	prephenate dehydrogenase	NA	NA	NA	NA
VEJ62831.1\|40540_40993_+\|tRNA	putative tRNA adenosine deaminase-associated protein	NA	NA	NA	NA
VEJ62832.1\|40989_41475_+	putative cytosine/adenosine deaminase	NA	NA	NA	NA
VEJ62833.1\|41877_42390_+	putative excisionase	K4ICM4	Acidithiobacillus_phage	4.9e-09	35.4
VEJ62834.1\|42389_42557_+	Uncharacterised protein	NA	NA	NA	NA
VEJ62835.1\|42903_45240_+	putative drug exporter of the RND superfamily	NA	NA	NA	NA
VEJ62836.1\|45520_46813_+\|tRNA	queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	9.6e-62	34.3
VEJ62837.1\|46822_47716_+\|tRNA	glutamyl-Q tRNA(Asp) synthetase	NA	NA	NA	NA

DBSCAN-SWA_2

513213 : 565737

Bacillus_phage(50.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ63280.1\|513213_513717_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK	NA	NA	NA	NA
VEJ63281.1\|513761_514385_+	ECF-family sigma factor H	A0A076YQ50	Rhizobium_phage	1.7e-08	28.5
VEJ63282.1\|514381_514633_+	anti sigma factor	NA	NA	NA	NA
VEJ63283.1\|514637_514850_-	Uncharacterised protein	NA	NA	NA	NA
VEJ63284.1\|515319_515580_-	putative transcriptional regulator	A0A2P1N2X5	Mycobacterium_phage	2.0e-11	45.1
VEJ63285.1\|516161_516674_+	hypothetical membrane protein	NA	NA	NA	NA
VEJ63286.1\|516667_517930_-	putative secreted protein	NA	NA	NA	NA
VEJ63287.1\|517926_519237_-	putative ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.9e-42	30.0
VEJ63288.1\|519495_519723_+	Protein of uncharacterised function (DUF3107)	NA	NA	NA	NA
VEJ63289.1\|519725_520604_+	putative secreted protein	NA	NA	NA	NA
VEJ63290.1\|520626_521484_+	Uncharacterised protein	NA	NA	NA	NA
VEJ63291.1\|521487_524670_+	putative ATP-dependent DNA helicase	NA	NA	NA	NA
VEJ63292.1\|524663_527894_+	DNA helicase II / ATP-dependent DNA helicase PcrA	A7KV33	Bacillus_phage	8.6e-19	22.9
VEJ63293.1\|527938_529027_+	membrane transporter	NA	NA	NA	NA
VEJ63294.1\|529013_529742_+	NAD+ diphosphatase	NA	NA	NA	NA
VEJ63295.1\|529734_531786_+	putative DNA helicase II	S5MMD7	Bacillus_phage	4.4e-45	27.6
VEJ63296.1\|531730_532624_-	Uncharacterised protein	NA	NA	NA	NA
VEJ63297.1\|532659_533181_+	putative metal-dependent hydrolase	NA	NA	NA	NA
VEJ63298.1\|533177_534569_-	Uncharacterized conserved protein	NA	NA	NA	NA
VEJ63299.1\|534649_535702_+	putative secreted protein	NA	NA	NA	NA
VEJ63300.1\|535713_536412_-	putative secreted protein	NA	NA	NA	NA
VEJ63301.1\|536462_536966_-	Uncharacterised protein	NA	NA	NA	NA
VEJ63302.1\|537138_540102_+	Uncharacterised protein family (UPF0182)	NA	NA	NA	NA
VEJ63303.1\|540665_541493_+	Uncharacterised protein	NA	NA	NA	NA
VEJ63304.1\|541468_542848_-\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	7.9e-38	33.7
VEJ63305.1\|542849_543458_+	Uncharacterised protein	NA	NA	NA	NA
VEJ63306.1\|543481_544345_+	Uncharacterised protein	NA	NA	NA	NA
VEJ63307.1\|544341_545481_+	Type IV secretory pathway, VirB4 components	NA	NA	NA	NA
VEJ63308.1\|545784_546993_+\|transposase	transposase	NA	NA	NA	NA
VEJ63309.1\|547045_547258_+	Uncharacterised protein	NA	NA	NA	NA
VEJ63310.1\|547505_547658_-	Uncharacterised protein	NA	NA	NA	NA
VEJ63311.1\|547870_548467_-	GcrE	NA	NA	NA	NA
VEJ63312.1\|548877_549459_+	Uncharacterised protein	NA	NA	NA	NA
VEJ63313.1\|549836_551045_-\|transposase	transposase	NA	NA	NA	NA
VEJ63314.1\|551262_551559_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ63315.1\|552111_553182_-\|protease	putative protease	NA	NA	NA	NA
VEJ63316.1\|553184_554141_-	membrane protein	NA	NA	NA	NA
VEJ63317.1\|554771_556253_+	oxaloacetate decarboxylase	NA	NA	NA	NA
VEJ63318.1\|556265_557822_+	acyl-CoA carboxylase, beta subunit	NA	NA	NA	NA
VEJ63319.1\|557835_558099_+	partial methylmalonyl-CoA carboxyltransferase	NA	NA	NA	NA
VEJ63320.1\|558123_558492_+	putative decarboxylase	NA	NA	NA	NA
VEJ63321.1\|558694_559786_+	putative secreted protein	NA	NA	NA	NA
VEJ63322.1\|559804_560593_-	histidinolphosphate phosphatase	NA	NA	NA	NA
VEJ63323.1\|560648_561521_-	Inositol-1-monophosphatase ImpA	NA	NA	NA	NA
VEJ63324.1\|561643_562753_+	peptide chain release factor 2	NA	NA	NA	NA
VEJ63325.1\|562749_564195_-	Aminobenzoyl-glutamate transport protein	NA	NA	NA	NA
VEJ63326.1\|564528_565737_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1178897 : 1218101

Tupanvirus(18.18%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ63894.1\|1178897_1181564_-\|tRNA	Alanyl-tRNA synthetase	A0A2K9L1X7	Tupanvirus	1.2e-63	35.9
VEJ63895.1\|1181725_1183084_-	recombination factor protein RarA	G3MBE0	Bacillus_virus	4.2e-92	46.1
VEJ63896.1\|1183120_1184383_-	Phosphotransferase enzyme family protein	NA	NA	NA	NA
VEJ63897.1\|1184505_1186305_-\|tRNA	aspartyl-tRNA synthetase	A0A2K9L3L6	Tupanvirus	2.2e-11	31.4
VEJ63898.1\|1186532_1187417_+	Zinc metallopeptidase	A0A1I9SA48	Rhodococcus_phage	3.5e-55	48.0
VEJ63899.1\|1187497_1190152_-	SNF2 family DNA/RNA helicase	A0A160DDK8	Gordonia_phage	8.9e-30	27.2
VEJ63900.1\|1190230_1192252_-	membrane protein	NA	NA	NA	NA
VEJ63901.1\|1192270_1193005_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
VEJ63902.1\|1193167_1193758_+	TetR family transcriptional regulator	NA	NA	NA	NA
VEJ63903.1\|1193802_1195191_+	L-serine dehydratase	NA	NA	NA	NA
VEJ63904.1\|1195262_1196534_-\|tRNA	histidyl-tRNA synthetase	NA	NA	NA	NA
VEJ63905.1\|1196574_1197222_-	Metallo-beta-lactamase superfamily protein	NA	NA	NA	NA
VEJ63906.1\|1197240_1197738_-	thiol peroxidase	NA	NA	NA	NA
VEJ63907.1\|1197881_1198724_+	peptidyl-prolyl cis-trans isomerase B	NA	NA	NA	NA
VEJ63908.1\|1198881_1199163_+	putative secreted protein	NA	NA	NA	NA
VEJ63909.1\|1199349_1200729_+\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	7.9e-38	33.7
VEJ63910.1\|1200823_1201294_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ63911.1\|1201479_1203759_-	GTP pyrophosphokinase	A0A291L9W9	Bordetella_phage	4.0e-10	35.8
VEJ63912.1\|1203817_1204372_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	7.6e-16	35.0
VEJ63913.1\|1204427_1206179_-	oligopeptide-binding protein OppA	NA	NA	NA	NA
VEJ63914.1\|1206247_1207360_-	preprotein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.9e-19	27.6
VEJ63915.1\|1207360_1209139_-	preprotein translocase subunit SecD	NA	NA	NA	NA
VEJ63916.1\|1209369_1209657_-	preprotein translocase	NA	NA	NA	NA
VEJ63917.1\|1209666_1210755_-	holliday junction DNA helicase RuvB	NA	NA	NA	NA
VEJ63918.1\|1210772_1211384_-	holliday junction DNA helicase RuvA	NA	NA	NA	NA
VEJ63919.1\|1211422_1211914_-	holliday junction resolvase	NA	NA	NA	NA
VEJ63920.1\|1212096_1212849_-	transcriptional regulator	NA	NA	NA	NA
VEJ63921.1\|1212893_1213127_+	Uncharacterised protein	NA	NA	NA	NA
VEJ63922.1\|1213086_1213941_-	acyl-CoA thioesterase II	NA	NA	NA	NA
VEJ63923.1\|1214096_1215386_+	Predicted integral membrane protein	NA	NA	NA	NA
VEJ63924.1\|1215284_1215527_-\|transposase	transposase IS3503g	NA	NA	NA	NA
VEJ63925.1\|1215973_1216483_+\|transposase	transposase-like protein	A0A1B3AZE5	Gordonia_phage	5.5e-21	45.5
VEJ63926.1\|1216501_1217941_+\|transposase	transposase-like protein	W5R8L2	Staphylococcus_phage	2.0e-28	34.4
VEJ63927.1\|1217891_1218101_+\|transposase	transposase-like protein	NA	NA	NA	NA

DBSCAN-SWA_4

1322201 : 1374437

Cafeteria_roenbergensis_virus(18.18%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ64033.1\|1322201_1323104_+\|tRNA	tRNA pseudouridine synthase B	E3T4J1	Cafeteria_roenbergensis_virus	4.4e-05	24.5
VEJ64034.1\|1323100_1323793_-	phosphopantheteinyl transferase, iron-chelating complex subunit	NA	NA	NA	NA
VEJ64035.1\|1323789_1324596_-	Calcineurin-like phosphoesterase	NA	NA	NA	NA
VEJ64036.1\|1324642_1325962_-	DNA-damage-inducible protein F	NA	NA	NA	NA
VEJ64037.1\|1325958_1326948_-	exopolyphosphatase	NA	NA	NA	NA
VEJ64038.1\|1326940_1327384_-	ribosome-binding factor A	NA	NA	NA	NA
VEJ64039.1\|1327523_1330385_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	9.3e-17	22.5
VEJ64040.1\|1330495_1330828_-	Predicted nucleic-acid-binding protein implicated in transcription termination	NA	NA	NA	NA
VEJ64041.1\|1331085_1332084_-	transcription elongation factor NusA	NA	NA	NA	NA
VEJ64042.1\|1332080_1332635_-	Ribosome maturation factor rimP	NA	NA	NA	NA
VEJ64043.1\|1332686_1333595_+	putative secreted protein	NA	NA	NA	NA
VEJ64044.1\|1333673_1335431_-\|tRNA	prolyl-tRNA synthetase	NA	NA	NA	NA
VEJ64045.1\|1335462_1336209_+	Protein of uncharacterised function (DUF328)	NA	NA	NA	NA
VEJ64046.1\|1336228_1337038_-	putative uroporphyrinogen III methyltransferase	NA	NA	NA	NA
VEJ64047.1\|1337051_1338398_+	Uncharacterized conserved protein	A0A075BSJ0	Microcystis_phage	1.7e-37	34.7
VEJ64048.1\|1338401_1339526_-	low-affinity zinc uptake protein	NA	NA	NA	NA
VEJ64049.1\|1339545_1340055_-	methylated-DNA--protein-cysteine methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	4.0e-11	38.8
VEJ64050.1\|1340044_1341424_-	cobyrinic acid a,c-diamide synthase	NA	NA	NA	NA
VEJ64051.1\|1341417_1342038_-	cobIyrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
VEJ64052.1\|1342161_1342974_-	putative magnesium chelatase	NA	NA	NA	NA
VEJ64053.1\|1342927_1344013_-	magnesium chelatase subunit D	NA	NA	NA	NA
VEJ64054.1\|1344210_1345710_-	malate:quinone oxidoreductase	NA	NA	NA	NA
VEJ64055.1\|1346086_1347100_+	Lysophospholipase L2	NA	NA	NA	NA
VEJ64056.1\|1347197_1348589_+	mycothione reductase	A0A2K5B2C5	Erysipelothrix_phage	8.5e-40	26.7
VEJ64057.1\|1348646_1350086_-	cobyric acid synthase	NA	NA	NA	NA
VEJ64058.1\|1350148_1351033_-	methionine aminopeptidase	NA	NA	NA	NA
VEJ64059.1\|1351079_1352936_-	putative secreted penicillin-binding protein 2	NA	NA	NA	NA
VEJ64060.1\|1353052_1354228_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA
VEJ64061.1\|1354333_1355548_-\|protease	zinc metalloprotease	NA	NA	NA	NA
VEJ64062.1\|1355592_1356756_-	1-deoxy-D-xylulose 5-phosphate reductoisomerase	NA	NA	NA	NA
VEJ64063.1\|1357086_1357512_+	hypothetical membrane protein	NA	NA	NA	NA
VEJ64064.1\|1357586_1358639_-	ribosomal RNA large subunit methyltransferase N	NA	NA	NA	NA
VEJ64065.1\|1358852_1359245_+	hypothetical membrane protein	NA	NA	NA	NA
VEJ64066.1\|1359307_1360186_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
VEJ64067.1\|1360309_1360867_-	ribosome recycling factor	NA	NA	NA	NA
VEJ64068.1\|1360938_1361670_-	uridylate kinase	NA	NA	NA	NA
VEJ64069.1\|1361891_1362719_-	elongation factor Ts	NA	NA	NA	NA
VEJ64070.1\|1362999_1363800_-	30S ribosomal protein S2	NA	NA	NA	NA
VEJ64071.1\|1364125_1365505_-\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	7.9e-38	33.7
VEJ64072.1\|1365629_1366151_+	putative secreted protein	NA	NA	NA	NA
VEJ64073.1\|1366165_1367074_-	tyrosine recombinase xerC	A0A0K2CP59	Brevibacillus_phage	5.4e-27	29.3
VEJ64074.1\|1367340_1368492_-	Rossmann-fold nucleotide-binding protein/SMF	S6BFL3	Thermus_phage	4.6e-23	29.2
VEJ64075.1\|1368488_1370039_-\|protease	ATP-dependent protease	NA	NA	NA	NA
VEJ64076.1\|1370025_1370394_-	putative endonuclease	NA	NA	NA	NA
VEJ64077.1\|1370624_1370930_-	putative excinuclease ATPase subunit	NA	NA	NA	NA
VEJ64078.1\|1370942_1371632_-	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	1.8e-22	38.5
VEJ64079.1\|1371628_1372459_-	signal peptidase I	NA	NA	NA	NA
VEJ64080.1\|1373094_1373577_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64081.1\|1373642_1374209_+\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	2.4e-33	36.0
VEJ64082.1\|1374212_1374437_+\|transposase	transposase-like protein	A0A2I6AZV9	Macacine_betaherpesvirus	7.5e-15	53.5

DBSCAN-SWA_5

1654233 : 1704782

Gordonia_phage(27.78%)

integrase,head,protease,terminase,portal,tRNA,transposase,tail

attL 1666505:1666520|attR 1717661:1717676

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ64346.1\|1654233_1656942_-\|tRNA	valyl-tRNA synthetase	A0A1V0S951	Catovirus	7.2e-136	37.4
VEJ64347.1\|1657036_1658017_-	malate dehydrogenase	NA	NA	NA	NA
VEJ64348.1\|1658499_1659252_+	TetR family regulatory protein	NA	NA	NA	NA
VEJ64349.1\|1659287_1660580_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.4e-131	54.2
VEJ64350.1\|1660726_1663252_-	para-aminobenzoate synthase component I	S4VNU7	Pandoravirus	3.3e-66	30.4
VEJ64351.1\|1663346_1663976_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.6e-38	44.0
VEJ64352.1\|1663993_1664593_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.3e-41	46.7
VEJ64353.1\|1664758_1666105_-	trigger factor	NA	NA	NA	NA
1666505:1666520	attL	NA	NA	NA	NA
VEJ64354.1\|1666931_1667168_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64355.1\|1667314_1668070_+	putative secreted protein	NA	NA	NA	NA
VEJ64356.1\|1668146_1668620_-	ribose 5-phosphate isomerase	NA	NA	NA	NA
VEJ64357.1\|1668651_1669272_-	DSBA oxidoreductase	NA	NA	NA	NA
VEJ64358.1\|1669393_1672012_+	putative aminopeptidase	A0A0P0IY26	Acinetobacter_phage	1.8e-43	27.5
VEJ64359.1\|1671988_1672195_-	cystathionine gamma-synthase	NA	NA	NA	NA
VEJ64360.1\|1672393_1673410_+	putative mechanosensitive ion channel protein	NA	NA	NA	NA
VEJ64361.1\|1673421_1673814_+	hemoglobin-like protein	NA	NA	NA	NA
VEJ64362.1\|1673810_1674431_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64363.1\|1674440_1674884_-	Thioesterase	NA	NA	NA	NA
VEJ64364.1\|1675010_1676681_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.3e-47	28.2
VEJ64365.1\|1676778_1677267_-	putative single-strand binding protein	NA	NA	NA	NA
VEJ64366.1\|1677449_1679486_-	Copper resistance D domain-containing protein/Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)	NA	NA	NA	NA
VEJ64367.1\|1679712_1681998_+	carbon starvation protein	NA	NA	NA	NA
VEJ64368.1\|1682018_1682219_+	Uncharacterized small protein	NA	NA	NA	NA
VEJ64369.1\|1682297_1682780_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64370.1\|1682827_1683640_+\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	6.9e-58	44.6
VEJ64371.1\|1683690_1684896_-	hypothetical membrane protein	NA	NA	NA	NA
VEJ64372.1\|1685300_1686332_+	zinc-binding dehydrogenase	NA	NA	NA	NA
VEJ64373.1\|1686391_1687192_+	corynebacterineae mycolate reductase A	NA	NA	NA	NA
VEJ64374.1\|1687210_1687843_+	oligoribonuclease	M4M9I5	Vibrio_phage	8.1e-22	38.0
VEJ64375.1\|1688020_1688851_+	dihydrodipicolinate synthase	NA	NA	NA	NA
VEJ64376.1\|1688851_1690105_-	putative lipoprotein	NA	NA	NA	NA
VEJ64377.1\|1690704_1690935_+	DNA binding domain, excisionase family	NA	NA	NA	NA
VEJ64378.1\|1690931_1691216_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64379.1\|1691208_1691538_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64380.1\|1691509_1691704_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64381.1\|1691735_1691855_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64382.1\|1692421_1692823_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64383.1\|1692734_1693187_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64384.1\|1693214_1693535_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64385.1\|1693488_1694934_+\|terminase	phage terminase	A0A2P1CBZ2	Gordonia_phage	2.3e-104	45.1
VEJ64386.1\|1695172_1696222_+\|portal	Phage portal protein	G9FGU9	Rhodococcus_phage	2.5e-52	45.3
VEJ64387.1\|1696205_1696757_+	basic 30 kDa endochitinase	A0A2H4P9D2	Corynebacterium_phage	1.0e-73	71.8
VEJ64388.1\|1696832_1696955_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64389.1\|1696947_1697184_+	putative secreted protein	NA	NA	NA	NA
VEJ64390.1\|1697176_1698580_+\|head,protease	phage prohead protease, HK97 family	G9FGV2	Rhodococcus_phage	2.2e-59	42.7
VEJ64391.1\|1698579_1698891_+	Uncharacterised protein	A0A2P1CBZ4	Gordonia_phage	5.2e-14	44.7
VEJ64392.1\|1698887_1699262_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64393.1\|1699261_1699684_+	Uncharacterised protein	A0A160DHJ4	Gordonia_phage	1.4e-17	38.4
VEJ64394.1\|1699641_1700100_+	Uncharacterised protein	A0A2P1CBZ9	Gordonia_phage	8.2e-24	46.9
VEJ64395.1\|1700099_1700411_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64396.1\|1700382_1700499_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64397.1\|1700488_1702054_+\|tail	Phage-related minor tail protein	A0A222ZGY6	Arthrobacter_phage	1.5e-61	46.3
VEJ64398.1\|1702047_1703235_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64399.1\|1703235_1703970_+	triple helix repeat-containing collagen	NA	NA	NA	NA
VEJ64400.1\|1703966_1704782_-\|integrase	putative phage integrase	A0A2P1CCU8	Gordonia_phage	1.2e-57	46.5
1717661:1717676	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1772261 : 1830870

Bacillus_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ64460.1\|1772261_1772930_-\|transposase	transposase-like protein	Q6H9S3	Enterobacteria_phage	1.5e-39	46.6
VEJ64461.1\|1772999_1773335_-\|transposase	transposase-like protein	A0A2P1JR43	Mycobacterium_phage	7.1e-09	43.2
VEJ64462.1\|1773506_1775075_+\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	9.0e-38	33.7
VEJ64463.1\|1775109_1775406_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64464.1\|1775517_1775721_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64465.1\|1775886_1776633_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64466.1\|1776534_1776894_-	ArsR family transcriptional regulator	NA	NA	NA	NA
VEJ64467.1\|1777285_1777744_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64468.1\|1778217_1778376_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64469.1\|1778711_1779059_+	Predicted integral membrane protein	NA	NA	NA	NA
VEJ64470.1\|1779091_1779787_+	putative secreted protein	NA	NA	NA	NA
VEJ64471.1\|1779937_1780381_+	antimicrobial peptide system protein, SdpA family	NA	NA	NA	NA
VEJ64472.1\|1780355_1781327_+	antimicrobial peptide system protein, SdpB family	NA	NA	NA	NA
VEJ64473.1\|1781651_1782197_+	putative conjugal transfer protein	NA	NA	NA	NA
VEJ64474.1\|1782274_1783195_-\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	8.1e-31	32.6
VEJ64475.1\|1784328_1785840_+	putative cytochrome ubiquinol oxidase subunit	NA	NA	NA	NA
VEJ64476.1\|1785847_1786822_+	putative cytochrome ubiquinol oxidase subunit	NA	NA	NA	NA
VEJ64477.1\|1786818_1788390_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-07	28.7
VEJ64478.1\|1788386_1789934_+	ABC transporter ATP-binding protein	M1I1A6	Acanthocystis_turfacea_Chlorella_virus	9.5e-08	27.7
VEJ64479.1\|1790013_1791528_-	succinyl-CoA:coenzyme A transferase	NA	NA	NA	NA
VEJ64480.1\|1791861_1793013_+	TIM-barrel containing enzyme	NA	NA	NA	NA
VEJ64481.1\|1793031_1793784_+	phosphate transport system regulator	NA	NA	NA	NA
VEJ64482.1\|1793933_1794146_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64483.1\|1794313_1795093_-	phosphate transport system ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-09	28.3
VEJ64484.1\|1795093_1795957_-	phosphate transport system permease protein pstA 1	NA	NA	NA	NA
VEJ64485.1\|1795970_1796996_-	phosphate transport system permease protein pstC 2	NA	NA	NA	NA
VEJ64486.1\|1797008_1798178_-	phosphate-binding protein pstS	M4QRU1	Synechococcus_phage	1.4e-16	27.2
VEJ64487.1\|1798365_1799277_-	putative acetyltransferase	NA	NA	NA	NA
VEJ64488.1\|1799315_1800119_+	putative secreted protein	NA	NA	NA	NA
VEJ64489.1\|1800148_1801201_-	Diacylglycerol kinase, catalytic region	A0A1V0SBJ0	Catovirus	2.4e-10	31.2
VEJ64490.1\|1801240_1801888_+	Domain of uncharacterised function (DUF1794)	NA	NA	NA	NA
VEJ64491.1\|1801894_1802800_-	4-amino-4-deoxychorismate lyase	NA	NA	NA	NA
VEJ64492.1\|1802844_1803948_+	Glycine cleavage T protein	NA	NA	NA	NA
VEJ64493.1\|1804168_1804375_+	Protein of uncharacterised function (DUF3073)	NA	NA	NA	NA
VEJ64494.1\|1804506_1805571_-	phosphoribosylaminoimidazole synthetase	Q58MH8	Prochlorococcus_phage	6.5e-56	39.4
VEJ64495.1\|1805630_1807187_-	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	4.4e-45	30.0
VEJ64496.1\|1807234_1807642_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64497.1\|1807981_1808770_-	hemolysin III-like protein	NA	NA	NA	NA
VEJ64498.1\|1808907_1809333_+	ribonucleotide reductase stimulatory protein	R4JF54	Bacillus_phage	7.3e-11	36.5
VEJ64499.1\|1809329_1810355_+	ribonucleotide-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	1.6e-104	60.4
VEJ64500.1\|1810292_1810466_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64501.1\|1811125_1811359_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64502.1\|1811690_1812161_-	glutathione peroxidase	NA	NA	NA	NA
VEJ64503.1\|1812162_1814292_-	oligopeptidase B	NA	NA	NA	NA
VEJ64504.1\|1814398_1814503_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64505.1\|1814582_1815476_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	A0A0M4JBD3	Mollivirus	7.6e-42	36.7
VEJ64506.1\|1815561_1817001_-	adenylosuccinate lyase	NA	NA	NA	NA
VEJ64507.1\|1817000_1818137_-	putative alanine-oxoisovalerate aminotransferase	NA	NA	NA	NA
VEJ64508.1\|1818147_1818768_-	K+ -uptake system protein	NA	NA	NA	NA
VEJ64509.1\|1818796_1820131_-	potassium uptake protein TrkH family	NA	NA	NA	NA
VEJ64510.1\|1820214_1821501_-	phosphoribosylamine-glycine ligase	NA	NA	NA	NA
VEJ64511.1\|1821579_1822005_+	HIT family protein	NA	NA	NA	NA
VEJ64512.1\|1822021_1822687_+	triacylglycerol lipase precursor	NA	NA	NA	NA
VEJ64513.1\|1822740_1824309_-	two-component system sensor histidine kinase	W8CYF6	Bacillus_phage	9.9e-37	36.7
VEJ64514.1\|1824344_1825055_-	two-component system response regulator	W8CYM9	Bacillus_phage	1.3e-33	35.9
VEJ64515.1\|1825340_1825478_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64516.1\|1826197_1827697_+	Major facilitator superfamily permease	NA	NA	NA	NA
VEJ64517.1\|1827683_1828304_+	TetR family regulatory protein	NA	NA	NA	NA
VEJ64518.1\|1828359_1830273_+	xanthine/uracil permeases family protein	NA	NA	NA	NA
VEJ64519.1\|1830699_1830870_+\|transposase	transposase-like protein	NA	NA	NA	NA

DBSCAN-SWA_7

1841783 : 1890809

Tupanvirus(22.22%)

bacteriocin,transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ64530.1\|1841783_1843175_-\|tRNA	cysteinyl-tRNA synthetase	A0A2K9L6B7	Tupanvirus	3.7e-43	32.8
VEJ64531.1\|1843193_1843676_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
VEJ64532.1\|1843668_1844403_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
VEJ64533.1\|1844412_1844994_-	putative transcription factor	NA	NA	NA	NA
VEJ64534.1\|1845264_1845831_+	Lipoprotein LpqE	NA	NA	NA	NA
VEJ64535.1\|1845934_1847395_-	putative secreted protein	NA	NA	NA	NA
VEJ64536.1\|1847532_1847676_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64537.1\|1847692_1849084_+	DNA repair protein RadA	NA	NA	NA	NA
VEJ64538.1\|1849111_1849828_-	putative secreted protein	NA	NA	NA	NA
VEJ64539.1\|1849897_1850527_-	beta-type carbonic anhydrase-like protein	NA	NA	NA	NA
VEJ64540.1\|1850657_1851545_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
VEJ64541.1\|1851541_1852795_-	Inner membrane protein YjjP	NA	NA	NA	NA
VEJ64542.1\|1852925_1853096_-	putative secreted protein	NA	NA	NA	NA
VEJ64543.1\|1853126_1855763_-\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	2.8e-132	40.3
VEJ64544.1\|1856210_1856666_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64545.1\|1856701_1857340_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64546.1\|1857446_1858241_+	alpha/beta fold family hydrolase	NA	NA	NA	NA
VEJ64547.1\|1858256_1859540_-	Thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	1.2e-93	45.9
VEJ64548.1\|1859749_1860172_+	Cytidine deaminase	NA	NA	NA	NA
VEJ64549.1\|1860175_1861390_+	putative sodium/nucleoside cotransporter	NA	NA	NA	NA
VEJ64550.1\|1861582_1861798_+\|transposase	transposase for insertion sequence	NA	NA	NA	NA
VEJ64551.1\|1862449_1864012_-\|tRNA	lysyl-tRNA synthetase	A0A2K9KZX5	Tupanvirus	1.3e-73	37.5
VEJ64552.1\|1864479_1866198_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64553.1\|1866194_1867745_+	YcaO-like family protein	NA	NA	NA	NA
VEJ64554.1\|1867780_1869265_+	Nitroreductase	NA	NA	NA	NA
VEJ64555.1\|1869261_1871862_+	lantibiotic dehydratase domain-containing protein	NA	NA	NA	NA
VEJ64556.1\|1871861_1872875_+\|bacteriocin	thiopeptide-type bacteriocin biosynthesis domain	NA	NA	NA	NA
VEJ64557.1\|1872871_1873849_+\|protease	Zn-dependent proteases	NA	NA	NA	NA
VEJ64558.1\|1873887_1874058_+	YcaO-like family protein	NA	NA	NA	NA
VEJ64559.1\|1874132_1875584_+	YcaO-like family protein	NA	NA	NA	NA
VEJ64560.1\|1875603_1876362_-	putative transport permease yvfS	NA	NA	NA	NA
VEJ64561.1\|1876358_1877282_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.5e-19	26.9
VEJ64562.1\|1877795_1878212_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64563.1\|1878260_1878674_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64564.1\|1878734_1879703_+\|protease	putative membrane protease subunit	NA	NA	NA	NA
VEJ64565.1\|1879702_1879900_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64566.1\|1879949_1881242_+	sodium/dicarboxylate symporter family protein	NA	NA	NA	NA
VEJ64567.1\|1881249_1882029_-	pantoate-beta-alanine ligase	NA	NA	NA	NA
VEJ64568.1\|1882041_1882665_-	Domain of uncharacterised function (DUF2520)	NA	NA	NA	NA
VEJ64569.1\|1882661_1883570_-	Dihydroneopterin aldolase	NA	NA	NA	NA
VEJ64570.1\|1883580_1884048_-	putative secreted protein	NA	NA	NA	NA
VEJ64571.1\|1884044_1884524_-	putative 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase	NA	NA	NA	NA
VEJ64572.1\|1884533_1884917_-	Dihydroneopterin aldolase	NA	NA	NA	NA
VEJ64573.1\|1884904_1885741_-	putative dihydropteroate synthase	S4VNV0	Pandoravirus	5.9e-20	34.0
VEJ64574.1\|1885864_1886179_-	Protein of uncharacterised function, DUF393	NA	NA	NA	NA
VEJ64575.1\|1886181_1886754_-	GTP cyclohydrolase I	A0A1W7AF02	Streptococcus_virus	1.0e-47	56.1
VEJ64576.1\|1886761_1889227_-	cell division protein	G9E4U6	Ostreococcus_lucimarinus_virus	5.2e-109	41.7
VEJ64577.1\|1889358_1889946_-	hypoxanthine-guanine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	5.8e-14	30.8
VEJ64578.1\|1889966_1890809_-\|tRNA	tRNA(Ile)-lysidine synthase	NA	NA	NA	NA

DBSCAN-SWA_8

1911055 : 1930992

Macacine_betaherpesvirus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ64593.1\|1911055_1911349_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64594.1\|1911586_1911811_-\|transposase	transposase-like protein	A0A2I6AZV9	Macacine_betaherpesvirus	7.5e-15	53.5
VEJ64595.1\|1911814_1912381_-\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	2.4e-33	36.0
VEJ64596.1\|1912446_1912929_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64597.1\|1913024_1914665_-	chaperonin GroEL	A0A240F779	uncultured_virus	5.9e-149	54.2
VEJ64598.1\|1916001_1916586_+	putative secreted protein	NA	NA	NA	NA
VEJ64599.1\|1916894_1917437_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64600.1\|1917592_1917721_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64601.1\|1917779_1918121_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64602.1\|1918295_1918436_-\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64603.1\|1918587_1918803_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64604.1\|1918919_1919522_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64605.1\|1919550_1919967_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64606.1\|1920410_1921349_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64607.1\|1921398_1921518_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64608.1\|1921697_1921820_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64609.1\|1922402_1923776_+	thiol precursor dipeptidase	NA	NA	NA	NA
VEJ64610.1\|1923981_1924155_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64611.1\|1924176_1925337_+	hypothetical membrane protein	NA	NA	NA	NA
VEJ64612.1\|1925279_1926359_-	putative carboxylate-amine ligase	NA	NA	NA	NA
VEJ64613.1\|1926355_1926850_-	putative secreted protein	NA	NA	NA	NA
VEJ64614.1\|1926891_1927095_-	Fis family transcriptional regulator	NA	NA	NA	NA
VEJ64615.1\|1927150_1927657_+	peptide deformylase	A0A2I7R224	Vibrio_phage	1.6e-12	38.2
VEJ64616.1\|1927673_1928561_+	Acetyltransferase	NA	NA	NA	NA
VEJ64617.1\|1928565_1929273_+	exodeoxyribonuclease III	NA	NA	NA	NA
VEJ64618.1\|1929269_1930703_+	cardiolipin synthase	NA	NA	NA	NA
VEJ64619.1\|1930800_1930992_+\|transposase	transposase-like protein	NA	NA	NA	NA

DBSCAN-SWA_9

2312361 : 2348852

Macacine_betaherpesvirus(16.67%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEJ64943.1\|2312361_2312586_-\|transposase	transposase (partial)	A0A2I6AZV9	Macacine_betaherpesvirus	1.0e-11	48.5
VEJ64944.1\|2312692_2313337_+	rhomboid family protein	NA	NA	NA	NA
VEJ64945.1\|2314413_2316213_+	thiamine biosynthesis protein ThiC	NA	NA	NA	NA
VEJ64946.1\|2316196_2316865_+	thiamine-phosphate pyrophosphorylase	NA	NA	NA	NA
VEJ64947.1\|2316861_2317950_+	putative thiamine biosynthesis oxidoreductase	NA	NA	NA	NA
VEJ64948.1\|2317933_2318134_+	thiamine biosynthesis protein	NA	NA	NA	NA
VEJ64949.1\|2318135_2318921_+	thiazole synthase	NA	NA	NA	NA
VEJ64950.1\|2318920_2319931_+	thiamine biosynthesis protein ThiF	NA	NA	NA	NA
VEJ64951.1\|2319927_2320782_+	multifunctional thiamine-phosphate pyrophosphorylase	NA	NA	NA	NA
VEJ64952.1\|2320936_2321422_+\|transposase	transposase-like protein	NA	NA	NA	NA
VEJ64953.1\|2321653_2321818_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64954.1\|2321898_2325153_+	CRISPR-associated endonuclease	NA	NA	NA	NA
VEJ64955.1\|2325156_2326071_+	CRISPR-associated protein	NA	NA	NA	NA
VEJ64956.1\|2326054_2326384_+	CRISPR-associated protein	NA	NA	NA	NA
VEJ64957.1\|2327387_2328176_+\|transposase	transposase-like protein	A0A0K2CZ57	Paenibacillus_phage	2.0e-09	33.0
VEJ64958.1\|2328818_2329088_-	putative septation inhibitor protein	NA	NA	NA	NA
VEJ64959.1\|2329204_2331214_-	serine/threonine-protein kinase	Q8JE84	Murine_leukemia_virus	7.3e-16	28.6
VEJ64960.1\|2331210_2332737_-	serine/threonine-protein kinase	A0A2P1EMR8	Moumouvirus	2.7e-15	29.4
VEJ64961.1\|2332749_2334210_-	putative secreted penicillin-binding protein 2	NA	NA	NA	NA
VEJ64962.1\|2334206_2335556_-	cell division protein	NA	NA	NA	NA
VEJ64963.1\|2335556_2337011_-	phosphoprotein phosphatase	NA	NA	NA	NA
VEJ64964.1\|2337010_2337499_-	putative secreted protein	NA	NA	NA	NA
VEJ64965.1\|2337512_2338379_-	putative FHA domain protein	NA	NA	NA	NA
VEJ64966.1\|2338888_2339188_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64967.1\|2339237_2339450_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64968.1\|2339594_2340110_-	Uncharacterised protein	NA	NA	NA	NA
VEJ64969.1\|2340114_2340378_-	regulatory protein	NA	NA	NA	NA
VEJ64970.1\|2340984_2341362_-	phenazine biosynthesis-like domain-containing protein	NA	NA	NA	NA
VEJ64971.1\|2341399_2342839_-	hypothetical membrane protein	NA	NA	NA	NA
VEJ64972.1\|2342831_2343533_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.3e-40	40.7
VEJ64973.1\|2343571_2344231_-	two-component system response regulator	NA	NA	NA	NA
VEJ64974.1\|2344230_2345460_-	two-component system sensor histidine kinase	NA	NA	NA	NA
VEJ64975.1\|2345609_2345900_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64976.1\|2345936_2346071_+	Uncharacterised protein	NA	NA	NA	NA
VEJ64977.1\|2346116_2347496_-\|transposase	transposase-like protein	A0A1B1P773	Bacillus_phage	7.9e-38	33.7
VEJ64978.1\|2347538_2348213_-\|holin	choline transport system permease protein	NA	NA	NA	NA
VEJ64979.1\|2348219_2348852_-\|holin	choline transport system permease protein	NA	NA	NA	NA

DBSCAN-SWA_10

2419397 : 2434886

Corynebacterium_phage(73.33%)

integrase,terminase

attL 2417684:2417696|attR 2422661:2422673

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2417684:2417696	attL	NA	NA	NA	NA
VEJ65050.1\|2419397_2420012_+	MerR family transcriptional regulator	A0A1W6JRB2	Corynebacterium_phage	3.4e-110	96.1
VEJ65051.1\|2420008_2420434_+	Uncharacterised protein	A0A1W6JRF9	Corynebacterium_phage	1.5e-35	95.0
VEJ65052.1\|2420464_2421691_-\|integrase	putative phage integrase	A0A1W6JRD7	Corynebacterium_phage	4.0e-219	91.4
VEJ65053.1\|2421790_2422813_-	putative transcriptional regulator	NA	NA	NA	NA
2422661:2422673	attR	NA	NA	NA	NA
VEJ65054.1\|2422824_2423388_-	Uncharacterised protein	NA	NA	NA	NA
VEJ65055.1\|2423481_2423889_-	Domain of uncharacterised function (DUF955)	A0A1W6JRC2	Corynebacterium_phage	1.3e-70	95.6
VEJ65056.1\|2423898_2424390_-	DNA-binding protein	A0A1W6JRB0	Corynebacterium_phage	5.2e-69	85.3
VEJ65057.1\|2424509_2424746_+	putative transcriptional regulator	A0A1W6JRC7	Corynebacterium_phage	1.2e-34	98.7
VEJ65058.1\|2424792_2425053_+	Uncharacterised protein	A0A1W6JRG7	Corynebacterium_phage	3.6e-37	95.3
VEJ65059.1\|2424942_2425212_-	Uncharacterised protein	NA	NA	NA	NA
VEJ65060.1\|2425249_2425495_-	putative secreted protein	NA	NA	NA	NA
VEJ65061.1\|2425527_2425953_-	Uncharacterised protein	NA	NA	NA	NA
VEJ65062.1\|2425990_2426809_+	putative anti-repressor protein	A0A1W6JRI1	Corynebacterium_phage	1.6e-139	90.8
VEJ65063.1\|2426828_2427029_+	Helix-turn-helix domain	NA	NA	NA	NA
VEJ65064.1\|2427025_2427115_+	Uncharacterised protein	NA	NA	NA	NA
VEJ65065.1\|2427125_2427350_+	Uncharacterised protein	A0A1W6JRD0	Corynebacterium_phage	6.4e-06	44.4
VEJ65066.1\|2427346_2427493_+	Uncharacterised protein	NA	NA	NA	NA
VEJ65067.1\|2427482_2427770_+	Uncharacterised protein	NA	NA	NA	NA
VEJ65068.1\|2427762_2427912_+	Uncharacterised protein	NA	NA	NA	NA
VEJ65069.1\|2427908_2428610_+	Uncharacterised protein	NA	NA	NA	NA
VEJ65070.1\|2428606_2429017_+	Uncharacterised protein	NA	NA	NA	NA
VEJ65071.1\|2429045_2430254_+	Uncharacterised protein	A0A220NQT1	Corynebacterium_phage	1.4e-131	65.7
VEJ65072.1\|2430246_2430831_+	Uncharacterised protein	A0A1W6JRC6	Corynebacterium_phage	1.7e-58	59.3
VEJ65073.1\|2431450_2431924_+	Uncharacterised protein	A0A1C9EHY3	Gordonia_phage	4.5e-25	49.6
VEJ65074.1\|2431907_2432975_+\|terminase	putative phage terminase	A0A1C9EHW4	Gordonia_phage	1.2e-118	57.1
VEJ65075.1\|2432949_2433561_+	gene 13 protein	A0A1C9EHV3	Gordonia_phage	2.1e-59	58.4
VEJ65076.1\|2433557_2434886_+	gene 14 protein	A0A222YZB0	Rhodococcus_phage	2.1e-56	34.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage