CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number
LR213460	Shigella sonnei strain AUSMDU00008333 genome assembly, plasmid: 3	0 crisprs	NA	0
LR213461	Shigella sonnei strain AUSMDU00008333 genome assembly, plasmid: 4	0 crisprs	NA	0
LR213458	Shigella sonnei strain AUSMDU00008333 genome assembly, chromosome: 1	4 crisprs	NA	2
LR213459	Shigella sonnei strain AUSMDU00008333 genome assembly, plasmid: 2	1 crisprs	NA	3

Cas Category Instructions

Results visualization

1. LR213458

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CRISPR-Cas detection and classification

Crispr_ID: LR213458_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR213458_1

1047824-1047953

Orphan

Consensus_repeat	Method
ATGCTGGCGCATCTTATCCAGCCTACGGTTGCTCTCCAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR213458_1

>merge|LR213458|1|1047824-1047953|CRISPRCasFinder
ATGCTGGCGCATCTTATCCAGCCTACGGTTGCTCTCCAGCCGGGTTGGATAAGGCGTTTATGCCGCATCCGACAGCTATCGCCGGATGCGATGCTGGCGCATCTTATCCGGCCTACGGTTGCTCTCCAGC

>LR213458|1|1|1047824-1047953|CRISPRCasFinder
ATGCTGGCGCATCTTATCCAGCCTACGGTTGCTCTCCAGC	CGGGTTGGATAAGGCGTTTATGCCGCATCCGACAGCTATCGCCGGATGCG
ATGCTGGCGCATCTTATCCGGCCTACGGTTGCTCTCCAGC

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Crispr_ID: LR213458_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR213458_2

1896328-1896476

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAAT	CRISPRCasFinder

2 spacers

The CRISPR arrays of LR213458_2

>merge|LR213458|2|1896328-1896476|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAATCGACGGGGTGCGGTAAAACCTTTGCGAACGCGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGAAAGATAAAATGC

>LR213458|2|2|1896328-1896476|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAAT	CGACGGGGTGCGGTAAAACCTTTGCGAACGC
GTTCACTGCCGTACAGGCAGCTTAGAAAT	TCACAGGTAACATACTCCACCCGCCCACCAT
GTTCACTGCCGTACAGAAAGATAAAATGC

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Crispr_ID: LR213458_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR213458_3

2526764-2526887

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR213458_3

>merge|LR213458|3|2526764-2526887|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>LR213458|3|3|2526764-2526887|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

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Crispr_ID: LR213458_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR213458_4

3303296-3303422

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR213458_4

>merge|LR213458|4|3303296-3303422|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>LR213458|4|4|3303296-3303422|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR213458_3	3.1\|2526807\|38\|LR213458\|CRISPRCasFinder	2526807-2526844	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
LR213458_4	4.1\|3303335\|49\|LR213458\|CRISPRCasFinder	3303335-3303383	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 3.1|2526807|38|LR213458|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

2. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

3. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

4. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

5. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

6. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

7. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

8. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

9. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

10. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

11. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

12. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

13. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

14. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

15. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

16. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

17. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

18. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

19. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

20. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

21. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

22. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

23. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

24. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

25. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

26. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

27. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

28. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

29. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

30. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

31. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

32. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

33. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

34. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

35. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

36. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

37. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

38. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

39. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

40. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

41. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

42. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

43. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

44. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

45. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

46. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

47. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

48. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

49. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

50. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

51. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

52. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

53. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

54. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

55. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

56. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

57. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

58. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

59. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

60. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

61. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

62. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

63. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

64. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

65. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

66. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

67. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

68. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

69. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

70. spacer 4.1|3303335|49|LR213458|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. LR213459

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: LR213459_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR213459_1

1373-1627

Orphan

Consensus_repeat	Method
GTATGCTGTCAGCGGT	PILER-CR

3 spacers

The CRISPR arrays of LR213459_1

>merge|LR213459|1|1373-1627|PILER-CR
GTATGCTGTCAGCGGTGTTTTATTGAGGAATTTTTGTTTGGATATGCTATCAGCGGTAATTAATGGCATATGTCAGACATTCGTATGCTGCCAGCGGTAATTTTGTTCTGGTTATACCCATACCGGTACACATTATTCATGCAATGTCTTAAGTATGCTGTCAGCGGTAAAAAATCGAGTAAAGTATGCTGTGAGCGGTGAGATAGACTCTCGATATGCTATCAGCGGTAGTTGATTGTGTATGCTGTCAGCGGT

>LR213459|1|1|1373-1627|PILER-CR
GTATGCTGTCAGCGGT	GTTTTATTGAGGAATTTTTGTTTGGATATGCTATCAGCGGTAATTAATGGCATATGTCAGACATTC
GTATGCTGCCAGCGGT	AATTTTGTTCTGGTTATACCCATACCGGTACACATTATTCATGCAATGTCTTAA
GTATGCTGTCAGCGGT	AAAAAATCGAGTAAAGTATGCTGTGAGCGGTGAGATAGACTCTCGATATGCTATCAGCGGTAGTTGATTGT
GTATGCTGTCAGCGGT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_KY515225	Escherichia coli strain 244 plasmid AnCo2, complete sequence	18820-18873	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP050499	Escherichia coli strain RM13322 plasmid pRM13322, complete sequence	69808-69861	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_AP017612	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence	1691-1744	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	CP022461	Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence	21467-21520	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP024271	Escherichia coli strain F8111-1SC3 plasmid unnamed2	75091-75144	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	1471-1524	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	MK125034	Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence	1691-1744	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	MK125035	Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence	1691-1744	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP027358	Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence	53856-53909	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	18343-18396	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	CP053753	Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence	75450-75503	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NC_018651	Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence	62156-62209	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP024264	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1	36034-36087	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP010153	Escherichia coli strain D9 plasmid A, complete genome	71601-71654	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP027369	Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence	83050-83103	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP010144	Escherichia coli strain D4 plasmid A, complete genome	71679-71732	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	83835-83888	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP019002	Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence	94582-94635	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	CP045933	Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence	1471-1524	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP041451	Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence	1471-1524	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP034165	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence	37107-37160	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP022085	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence	96917-96970	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP014490	Escherichia coli strain G749 plasmid pG749_2, complete sequence	85747-85800	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NC_023916	Escherichia coli H89 plasmid pECOH89, complete sequence	1691-1744	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_LR213459	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2	1471-1524	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_KY515224	Escherichia coli strain 243 plasmid AnCo1, complete sequence	106949-107002	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	MF554642	uncultured bacterium clone AA-105 plasmid pTIC, complete sequence	31093-31146	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	CP054387	Escherichia phage CMS-2020a, complete genome	1471-1524	0	1.0
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	64261-64314	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	86946-86999	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	28914-28967	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	633-686	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	70427-70480	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP045191	Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence	1471-1524	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP041426	Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence	82641-82694	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	137199-137252	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	1471-1524	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP015915	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence	75929-75982	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP012114	Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence	63380-63433	1	0.981
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	2682-2735	2	0.963
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP045278	Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence	1471-1524	2	0.963
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	7833-7886	2	0.963
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	CP025888	Escherichia coli strain 503046 plasmid p503046_111, complete sequence	1472-1525	2	0.963
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	104450-104503	2	0.963
LR213459_1	1.2\|1471\|54\|LR213459\|PILER-CR	1471-1524	54	CP053388	Escherichia phage CMS-2020a, complete sequence	1471-1524	2	0.963
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP050499	Escherichia coli strain RM13322 plasmid pRM13322, complete sequence	69878-69943	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_AP017612	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence	1609-1674	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	CP022461	Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence	21385-21450	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	CP053753	Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence	75520-75585	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NC_018651	Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence	62074-62139	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	CP045933	Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence	1389-1454	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP022085	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence	96835-96900	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_LR213459	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2	1389-1454	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	CP054387	Escherichia phage CMS-2020a, complete genome	1389-1454	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	1389-1454	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	70345-70410	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP019002	Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence	94500-94565	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP041451	Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence	1389-1454	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	MF554642	uncultured bacterium clone AA-105 plasmid pTIC, complete sequence	31011-31076	6	0.909
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP045278	Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence	1389-1454	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	CP025888	Escherichia coli strain 503046 plasmid p503046_111, complete sequence	1390-1455	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	CP053388	Escherichia phage CMS-2020a, complete sequence	1389-1454	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	64331-64396	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	86864-86929	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	28832-28897	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_KY515225	Escherichia coli strain 244 plasmid AnCo2, complete sequence	18890-18955	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP024271	Escherichia coli strain F8111-1SC3 plasmid unnamed2	75161-75226	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	551-616	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP045191	Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence	1389-1454	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP041426	Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence	82559-82624	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	MK125034	Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence	1609-1674	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	MK125035	Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence	1609-1674	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP027358	Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence	53774-53839	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	18413-18478	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP024264	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1	36104-36169	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP010153	Escherichia coli strain D9 plasmid A, complete genome	71519-71584	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	137269-137334	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	1389-1454	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP027369	Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence	82968-83033	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP010144	Escherichia coli strain D4 plasmid A, complete genome	71597-71662	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	83753-83818	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP015915	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence	75999-76064	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP034165	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence	37177-37242	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP014490	Escherichia coli strain G749 plasmid pG749_2, complete sequence	85665-85730	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NC_023916	Escherichia coli H89 plasmid pECOH89, complete sequence	1609-1674	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_KY515224	Escherichia coli strain 243 plasmid AnCo1, complete sequence	107019-107084	7	0.894
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	2600-2665	8	0.879
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	7903-7968	8	0.879
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	104520-104585	8	0.879
LR213459_1	1.1\|1389\|66\|LR213459\|PILER-CR	1389-1454	66	NZ_CP012114	Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence	63450-63515	8	0.879
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP050499	Escherichia coli strain RM13322 plasmid pRM13322, complete sequence	69721-69791	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	2752-2822	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	CP022461	Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence	21537-21607	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP045191	Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP045278	Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP041426	Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence	82711-82781	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP027358	Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence	53926-53996	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	18256-18326	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	7746-7816	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	CP053753	Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence	75363-75433	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NC_018651	Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence	62226-62296	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP010153	Escherichia coli strain D9 plasmid A, complete genome	71671-71741	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	CP025888	Escherichia coli strain 503046 plasmid p503046_111, complete sequence	1542-1612	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP027369	Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence	83120-83190	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP010144	Escherichia coli strain D4 plasmid A, complete genome	71749-71819	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP019002	Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence	94652-94722	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	CP045933	Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP015915	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence	75842-75912	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP022085	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence	96987-97057	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_LR213459	Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	CP054387	Escherichia phage CMS-2020a, complete genome	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	CP053388	Escherichia phage CMS-2020a, complete sequence	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	64174-64244	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	87016-87086	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	28984-29054	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	703-773	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	70497-70567	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	137112-137182	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP041451	Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence	1541-1611	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	MF554642	uncultured bacterium clone AA-105 plasmid pTIC, complete sequence	31163-31233	11	0.845
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_AP017612	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence	1761-1831	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP024271	Escherichia coli strain F8111-1SC3 plasmid unnamed2	75004-75074	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP024264	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1	35947-36017	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	83906-83976	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	104363-104433	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP034165	Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence	37020-37090	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP012114	Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence	63294-63364	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	MK125034	Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence	1761-1831	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	MK125035	Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence	1761-1831	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_CP014490	Escherichia coli strain G749 plasmid pG749_2, complete sequence	85817-85887	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NC_023916	Escherichia coli H89 plasmid pECOH89, complete sequence	1761-1831	12	0.831
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_KY515225	Escherichia coli strain 244 plasmid AnCo2, complete sequence	18733-18803	13	0.817
LR213459_1	1.3\|1541\|71\|LR213459\|PILER-CR	1541-1611	71	NZ_KY515224	Escherichia coli strain 243 plasmid AnCo1, complete sequence	106862-106932	13	0.817

1. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_KY515225 (Escherichia coli strain 244 plasmid AnCo2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

2. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

3. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

4. spacer 1.2|1471|54|LR213459|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

5. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

6. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

7. spacer 1.2|1471|54|LR213459|PILER-CR matches to MK125034 (Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

8. spacer 1.2|1471|54|LR213459|PILER-CR matches to MK125035 (Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

9. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

10. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

11. spacer 1.2|1471|54|LR213459|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

12. spacer 1.2|1471|54|LR213459|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

13. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

14. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

15. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

16. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

17. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

18. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

19. spacer 1.2|1471|54|LR213459|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

20. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

21. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

22. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

23. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

24. spacer 1.2|1471|54|LR213459|PILER-CR matches to NC_023916 (Escherichia coli H89 plasmid pECOH89, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

25. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

26. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_KY515224 (Escherichia coli strain 243 plasmid AnCo1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

27. spacer 1.2|1471|54|LR213459|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

28. spacer 1.2|1471|54|LR213459|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 0, identity: 1.0

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	Protospacer
******************************************************

29. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

30. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

31. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

32. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

33. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttataccaataccggtacacattattcatgcaatgtcttaa	Protospacer
******************** *********************************

34. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

35. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

36. spacer 1.2|1471|54|LR213459|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgatacacattattcatgcaatgtcttaa	Protospacer
***************************.**************************

37. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

38. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatgtcttaa	Protospacer
**************************** *************************

39. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 1, identity: 0.981

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccggtacacattattcatgcaatgccttaa	Protospacer
************************************************.*****

40. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

41. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

42. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

43. spacer 1.2|1471|54|LR213459|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

44. spacer 1.2|1471|54|LR213459|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

45. spacer 1.2|1471|54|LR213459|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 2, identity: 0.963

aattttgttctggttatacccataccggtacacattattcatgcaatgtcttaa	CRISPR spacer
aattttgttctggttatacccataccgggacacattattcatgcaatttcttaa	Protospacer
**************************** ****************** ******

46. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

47. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

48. spacer 1.1|1389|66|LR213459|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

49. spacer 1.1|1389|66|LR213459|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

50. spacer 1.1|1389|66|LR213459|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

51. spacer 1.1|1389|66|LR213459|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

52. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

53. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

54. spacer 1.1|1389|66|LR213459|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

55. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

56. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

57. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

58. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

59. spacer 1.1|1389|66|LR213459|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 6, identity: 0.909

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	Protospacer
************************************************************

60. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

61. spacer 1.1|1389|66|LR213459|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

62. spacer 1.1|1389|66|LR213459|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

63. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

64. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

65. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

66. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_KY515225 (Escherichia coli strain 244 plasmid AnCo2, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

67. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

68. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

69. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

70. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

71. spacer 1.1|1389|66|LR213459|PILER-CR matches to MK125034 (Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

72. spacer 1.1|1389|66|LR213459|PILER-CR matches to MK125035 (Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

73. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

74. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

75. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

76. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

77. spacer 1.1|1389|66|LR213459|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatatcag	Protospacer
*******************************************************.****

78. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

79. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

80. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

81. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

82. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

83. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

84. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

85. spacer 1.1|1389|66|LR213459|PILER-CR matches to NC_023916 (Escherichia coli H89 plasmid pECOH89, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

86. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_KY515224 (Escherichia coli strain 243 plasmid AnCo1, complete sequence) position: , mismatch: 7, identity: 0.894

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
**************************************************.*********

87. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 8, identity: 0.879

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gtgttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
** ***********************************************.*********

88. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 8, identity: 0.879

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gtgttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
** ***********************************************.*********

89. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 8, identity: 0.879

gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtcag	CRISPR spacer
gtgttattgaggaatttttgtttggatatgctatcagcggtaattaatggtatatgtcag	Protospacer
** ***********************************************.*********

90. spacer 1.1|1389|66|LR213459|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 8, identity: 0.879

-gttttattgaggaatttttgtttggatatgctatcagcggtaattaatggcatatgtca	CRISPR spacer
tgttttattgaggaa-ttttgtttggatatgctatcagcggtaattaatggcatatgtca	Protospacer
 ************** ********************************************

91. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP050499 (Escherichia coli strain RM13322 plasmid pRM13322, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

92. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

93. spacer 1.3|1541|71|LR213459|PILER-CR matches to CP022461 (Shigella sonnei strain 2015C-3807 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

94. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP045191 (Escherichia coli strain NT1F31 plasmid pNT1F31-113kb, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

95. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP045278 (Escherichia coli strain LAU-OXA plasmid pLAU-OXA1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

96. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP041426 (Escherichia coli strain STEC388 plasmid pSTEC388_1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

97. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP027358 (Escherichia coli strain 2013C-4991 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

98. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

99. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

100. spacer 1.3|1541|71|LR213459|PILER-CR matches to CP053753 (Shigella sonnei strain 506 plasmid pMHMC-002, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

101. spacer 1.3|1541|71|LR213459|PILER-CR matches to NC_018651 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid p09EL50, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

102. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP010153 (Escherichia coli strain D9 plasmid A, complete genome) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

103. spacer 1.3|1541|71|LR213459|PILER-CR matches to CP025888 (Escherichia coli strain 503046 plasmid p503046_111, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

104. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

105. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP027369 (Escherichia coli strain 2014C-3307 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

106. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP010144 (Escherichia coli strain D4 plasmid A, complete genome) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

107. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

108. spacer 1.3|1541|71|LR213459|PILER-CR matches to CP045933 (Shigella sonnei strain AUSMDU00010534 plasmid pAUSMDU00010534_01, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

109. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP015915 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy3, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

110. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP022085 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

111. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_LR213459 (Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 plasmid 2) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

112. spacer 1.3|1541|71|LR213459|PILER-CR matches to CP054387 (Escherichia phage CMS-2020a, complete genome) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

113. spacer 1.3|1541|71|LR213459|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

114. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

115. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

116. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

117. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

118. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

119. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

120. spacer 1.3|1541|71|LR213459|PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

121. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP041451 (Escherichia coli strain YPE3 plasmid pYPE3-114k, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

122. spacer 1.3|1541|71|LR213459|PILER-CR matches to MF554642 (uncultured bacterium clone AA-105 plasmid pTIC, complete sequence) position: , mismatch: 11, identity: 0.845

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
************************************************************

123. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

124. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP024271 (Escherichia coli strain F8111-1SC3 plasmid unnamed2) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgatatagactctcgatatgctatcagcgg	Protospacer
********************************* **************************

125. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP024264 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed1) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

126. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

127. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaagaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
***.********************************************************

128. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP034165 (Escherichia albertii strain 2014C-4015 plasmid p2014C-4015-1, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaaacgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
****** *****************************************************

129. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
taaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	Protospacer
 ***********************************************************

130. spacer 1.3|1541|71|LR213459|PILER-CR matches to MK125034 (Escherichia coli O25b:H4-ST131 plasmid p7.2.1, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagataaactctcgatatgctatcagcgg	Protospacer
*************************************.**********************

131. spacer 1.3|1541|71|LR213459|PILER-CR matches to MK125035 (Escherichia coli O25b:H4-ST131 plasmid pB20 clone ST131-Rx_O25b:fimH30, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagataaactctcgatatgctatcagcgg	Protospacer
*************************************.**********************

132. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_CP014490 (Escherichia coli strain G749 plasmid pG749_2, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagataaactctcgatatgctatcagcgg	Protospacer
*************************************.**********************

133. spacer 1.3|1541|71|LR213459|PILER-CR matches to NC_023916 (Escherichia coli H89 plasmid pECOH89, complete sequence) position: , mismatch: 12, identity: 0.831

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgagcggtgagataaactctcgatatgctatcagcgg	Protospacer
*************************************.**********************

134. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_KY515225 (Escherichia coli strain 244 plasmid AnCo2, complete sequence) position: , mismatch: 13, identity: 0.817

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgggcggtgatatagactctcgatatgctatcagcgg	Protospacer
*************************.******* **************************

135. spacer 1.3|1541|71|LR213459|PILER-CR matches to NZ_KY515224 (Escherichia coli strain 243 plasmid AnCo1, complete sequence) position: , mismatch: 13, identity: 0.817

aaaaaatcgagtaaagtatgctgtgagcggtgagatagactctcgatatgctatcagcgg	CRISPR spacer
aaaaaatcgagtaaagtatgctgtgggcggtgatatagactctcgatatgctatcagcgg	Protospacer
*************************.******* **************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage