CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
LR215044	Mycoplasma arginini strain NCTC10129 genome assembly, chromosome: 1	1 crisprs	cas9,cas1,cas2,csn2,DEDDh	2	15	1
LR215046	Mycoplasma arginini strain NCTC10129 genome assembly, plasmid: 3	0 crisprs	NA	0	0	0
LR215045	Mycoplasma arginini strain NCTC10129 genome assembly, plasmid: 2	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR215044_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR215044_2

354507-355797

TypeII

Consensus_repeat	Method
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	PILER-CR
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	CRISPRCasFinder
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	CRT

19 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LR215044_2

>merge|LR215044|2|354507-355797|PILER-CR,CRISPRCasFinder,CRT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACTCAATTTCAGACAAATAATATGCTGGATCTATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACAATAATTAAAAGGTTTATAAAAGGCAAGCGATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACATTAAAGAAAATAAAGAAGGAGAATAGAATATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACTTTTTTATCATCATTTTTTTTACCTAATTTATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACACCGTAAAGGGAGAATCACCGTCAGTATTGATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACAATAAATCACTCATCAGGATTATTATAACCATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACTATTTAAATAATTCCCATTAATATAGTCATATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACGATTCCCTTGCTGAACCTAATAAATAATCCATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACGAATAATAAAAGTACCATCTCAATTTATGTATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACAAGGAAAATGAGTTGGCGCCTTTAAATGAATATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACTTCAATACGTGTGGATATTGTGATCATTGTATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACGATATTTATTGAAGATTGTTTGGATAAACTATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACTTTTTAAAGCTTCATAACTTTCCTGATTATATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACTAAAGAATTAAAAGAGGTTATTGAATGGTAATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACAAATGTCTTACAATTTGCTTTTGCTGAGCCATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACATAATACATCGGTGTAGTCGAAATAGTAGTATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACAAAAAAATTAGGTAGTTACGAACAAGACGTATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACGAACTTATTCTCTATTAGTTCAGCGTAAGATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACTATATTCTATTAGAATTGCGAACATTACTAAATTTTTGTGCTGTACAATTTCTTATTAGAATTAAAA

>LR215044|2|1|354507-355730|PILER-CR
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TCAATTTCAGACAAATAATATGCTGGATCT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AATAATTAAAAGGTTTATAAAAGGCAAGCG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ATTAAAGAAAATAAAGAAGGAGAATAGAAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTTTTTATCATCATTTTTTTTACCTAATTT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ACCGTAAAGGGAGAATCACCGTCAGTATTG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AATAAATCACTCATCAGGATTATTATAACC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TATTTAAATAATTCCCATTAATATAGTCAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GATTCCCTTGCTGAACCTAATAAATAATCC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GAATAATAAAAGTACCATCTCAATTTATGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAGGAAAATGAGTTGGCGCCTTTAAATGAAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTCAATACGTGTGGATATTGTGATCATTGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GATATTTATTGAAGATTGTTTGGATAAACT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTTTTAAAGCTTCATAACTTTCCTGATTAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TAAAGAATTAAAAGAGGTTATTGAATGGTA
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAATGTCTTACAATTTGCTTTTGCTGAGCC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ATAATACATCGGTGTAGTCGAAATAGTAGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAAAAAATTAGGTAGTTACGAACAAGACGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GAACTTATTCTCTATTAGTTCAGCGTAAG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC

>LR215044|2|2|354507-355797|CRISPRCasFinder
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TCAATTTCAGACAAATAATATGCTGGATCT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AATAATTAAAAGGTTTATAAAAGGCAAGCG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ATTAAAGAAAATAAAGAAGGAGAATAGAAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTTTTTATCATCATTTTTTTTACCTAATTT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ACCGTAAAGGGAGAATCACCGTCAGTATTG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AATAAATCACTCATCAGGATTATTATAACC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TATTTAAATAATTCCCATTAATATAGTCAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GATTCCCTTGCTGAACCTAATAAATAATCC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GAATAATAAAAGTACCATCTCAATTTATGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAGGAAAATGAGTTGGCGCCTTTAAATGAAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTCAATACGTGTGGATATTGTGATCATTGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GATATTTATTGAAGATTGTTTGGATAAACT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTTTTAAAGCTTCATAACTTTCCTGATTAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TAAAGAATTAAAAGAGGTTATTGAATGGTA
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAATGTCTTACAATTTGCTTTTGCTGAGCC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ATAATACATCGGTGTAGTCGAAATAGTAGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAAAAAATTAGGTAGTTACGAACAAGACGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GAACTTATTCTCTATTAGTTCAGCGTAAG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TATATTCTATTAGAATTGCGAACATTACTAA
ATTTTTGTGCTGTACAATTTCTTATTAGAATTAAAA

>LR215044|2|1|354507-355797|CRT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TCAATTTCAGACAAATAATATGCTGGATCT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AATAATTAAAAGGTTTATAAAAGGCAAGCG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ATTAAAGAAAATAAAGAAGGAGAATAGAAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTTTTTATCATCATTTTTTTTACCTAATTT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ACCGTAAAGGGAGAATCACCGTCAGTATTG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AATAAATCACTCATCAGGATTATTATAACC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TATTTAAATAATTCCCATTAATATAGTCAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GATTCCCTTGCTGAACCTAATAAATAATCC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GAATAATAAAAGTACCATCTCAATTTATGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAGGAAAATGAGTTGGCGCCTTTAAATGAAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTCAATACGTGTGGATATTGTGATCATTGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GATATTTATTGAAGATTGTTTGGATAAACT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TTTTTAAAGCTTCATAACTTTCCTGATTAT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TAAAGAATTAAAAGAGGTTATTGAATGGTA
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAATGTCTTACAATTTGCTTTTGCTGAGCC
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	ATAATACATCGGTGTAGTCGAAATAGTAGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	AAAAAAATTAGGTAGTTACGAACAAGACGT
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	GAACTTATTCTCTATTAGTTCAGCGTAAG
ATTTTTGTGCTGTACAATTTCTTATTAGAGTAAAAC	TATATTCTATTAGAATTGCGAACATTACTAA
ATTTTTGTGCTGTACAATTTCTTATTAGAATTAAAA

Protein	Signature genes	Signature genes Name	Protein_function
LR215044.1\|VEU81692.1\|357732_358587_+\|riboflavin-kinase	unknown	unknown	gnl\|CDD\|235946
LR215044.1\|VEU81691.1\|356878_357685_+\|HAD-hydrolase,-family-IIB	unknown	unknown	gnl\|CDD\|369792
LR215044.1\|VEU81699.1\|366142_368926_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|173869
LR215044.1\|VEU81685.1\|351135_351918_-\|Uncharacterised-protein	unknown	unknown	unknown
LR215044.1\|VEU81696.1\|362496_363672_-\|ABC-type-dipeptide/oligopeptide/nickel-transport-system-ATP-binding-protein-(DppD/OppD)	unknown	unknown	gnl\|CDD\|223521
LR215044.1\|VEU81698.1\|365008_366136_-\|oligopeptide-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
LR215044.1\|VEU81695.1\|359999_362507_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226967
LR215044.1\|VEU81683.1\|347555_349586_-\|conjugal-transfer-coupling-protein-TraG	unknown	unknown	gnl\|CDD\|226036
LR215044.1\|VEU81690.1\|356011_356860_+\|tRNA-pseudouridine-synthase-B	unknown	unknown	gnl\|CDD\|211339
LR215044.1\|VEU81681.1\|345787_346561_-\|Modification-methylase-HpaI	unknown	unknown	gnl\|CDD\|334588
LR215044.1\|VEU81694.1\|359394_359901_-\|Uncharacterised-protein	unknown	unknown	unknown
LR215044.1\|VEU81693.1\|358618_359347_-\|triosephosphate-isomerase	unknown	unknown	gnl\|CDD\|238190
LR215044.1\|VEU81687.1\|352533_353403_+\|CRISPR-associated-endonuclease-Cas1,-subtype-II/NMENI	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
LR215044.1\|VEU81682.1\|346582_347563_-\|Uncharacterised-protein	unknown	unknown	unknown
LR215044.1\|VEU81688.1\|353419_353728_+\|CRISPR-associated-protein-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LR215044.1\|VEU81680.1\|345356_345530_-\|Uncharacterised-protein	unknown	unknown	unknown
LR215044.1\|VEU81697.1\|363674_364985_-\|Dipeptide-transport-system-permease-protein-dppC	unknown	unknown	gnl\|CDD\|224094
LR215044.1\|VEU81689.1\|353727_354501_+\|Uncharacterised-protein	csn2	cls000024_csn2_CAS-II-A	gnl\|CDD\|214368
LR215044.1\|VEU81684.1\|349585_350815_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|234767
LR215044.1\|VEU81686.1\|352114_352330_-\|Uncharacterized-protein-conserved-in-bacteria	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187774

Protein	Function_ID	Function_description	E-value
LR215044.1\|VEU81692.1\|357732_358587_+\|riboflavin-kinase	gnl\|CDD\|235946	PRK07143, PRK07143, hypothetical protein; Provisional.	4.55432e-63
LR215044.1\|VEU81699.1\|366142_368926_-\|Uncharacterised-protein	gnl\|CDD\|173869	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding component of an ATP-binding cassette (ABC)-type oligopeptide transport system comprised of 5 subunits. The transport system OppABCDEF contains two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0.00163724
LR215044.1\|VEU81696.1\|362496_363672_-\|ABC-type-dipeptide/oligopeptide/nickel-transport-system-ATP-binding-protein-(DppD/OppD)	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.91792e-138
LR215044.1\|VEU81698.1\|365008_366136_-\|oligopeptide-ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.22804e-63
LR215044.1\|VEU81695.1\|359999_362507_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226967	COG4608, AppF, ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism].	2.98826e-62
LR215044.1\|VEU81683.1\|347555_349586_-\|conjugal-transfer-coupling-protein-TraG	gnl\|CDD\|226036	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion].	4.81584e-31
LR215044.1\|VEU81690.1\|356011_356860_+\|tRNA-pseudouridine-synthase-B	gnl\|CDD\|211339	cd02573, PseudoU_synth_EcTruB, Pseudouridine synthase, Escherichia coli TruB like. This group consists of bacterial pseudouridine synthases similar to E. coli TruB and Mycobacterium tuberculosis TruB. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). E. coli TruB and M. tuberculosis TruB make psi55 in the T loop of tRNAs. Psi55 is nearly universally conserved. E. coli TruB is not inhibited by RNA containing 5-fluorouridine.	3.25852e-72
LR215044.1\|VEU81681.1\|345787_346561_-\|Modification-methylase-HpaI	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	5.76551e-65
LR215044.1\|VEU81693.1\|358618_359347_-\|triosephosphate-isomerase	gnl\|CDD\|238190	cd00311, TIM, Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.	3.2494e-77
LR215044.1\|VEU81687.1\|352533_353403_+\|CRISPR-associated-endonuclease-Cas1,-subtype-II/NMENI	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	4.17735e-92
LR215044.1\|VEU81691.1\|356878_357685_+\|HAD-hydrolase,-family-IIB	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	1.86644e-47
LR215044.1\|VEU81688.1\|353419_353728_+\|CRISPR-associated-protein-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	6.07803e-17
LR215044.1\|VEU81697.1\|363674_364985_-\|Dipeptide-transport-system-permease-protein-dppC	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.5094e-57
LR215044.1\|VEU81689.1\|353727_354501_+\|Uncharacterised-protein	gnl\|CDD\|214368	CHL00117, rpoC2, RNA polymerase beta'' subunit; Reviewed.	0.00785067
LR215044.1\|VEU81684.1\|349585_350815_-\|Uncharacterised-protein	gnl\|CDD\|234767	PRK00448, polC, DNA polymerase III PolC; Validated.	0.00260637
LR215044.1\|VEU81686.1\|352114_352330_-\|Uncharacterized-protein-conserved-in-bacteria	gnl\|CDD\|187774	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Very large protein containing McrA/HNH-nuclease related domain and a RuvC-like nuclease domain; signature gene for type II.	1.35444e-11

>LR215044.1|VEU81689.1|353727_354501_+|Uncharacterised-protein
MWNFFNDINFNLETKYNFKIVEEDNTDYLIRNLIDYENNTSKKSIRINENTFSIRDCLIISNLSYVSDILNSISKSWIQEKINNNENWNTNIILDQEKVDTIIEQINLKIGFEYLFKDIDNNKLIKSIFTINEKLLISKNNLLNILDILSSSNFKPLIIVKDLTYINIEELIKYSNLNFLILTSDFTKYIQSYNQLELVSFYNGEILFDIKSCTPVINFFENIKNKEIKENENFFLNKEEEKQFKFNFFDIKKSFFE
>LR215044.1|VEU81688.1|353419_353728_+|CRISPR-associated-protein-Cas2
MRILLMYDIYYNNDEDIKMYNKFVDYLYKLGYIRIQYSIYAKILATHTEYDSEKRKILRLIPKNSNVRILLLTEKQYQNMEILNGEKAKNEIYNLEEEYIRL
>LR215044.1|VEU81687.1|352533_353403_+|CRISPR-associated-endonuclease-Cas1,-subtype-II/NMENI
MNKKILEISESEYVSLFLNNLIIKQKEEKIIIPINNIEVIIFENERTNISIPVINELVDKKVNIIICKNHLPNSIIVPHNGYYDNKVFQNQIKWDIKYKSLIWQKIIKLKIENSLYNLTSLDLINDIDIQKMNNYILNVEDYDKTNREGHAAKLYFQILFGNGFTRERNAEDKINIYLNYGYSVLLSLIARLICSKGLDNRISLFHKSFNNNFPLACDLMEPFRFWIDRIVFDFYKENFGKTFQEFKETLFKSFNKYIVYKNKTIKFSRYIDIVINELLNLEESETEID
>LR215044.1|VEU81686.1|352114_352330_-|Uncharacterized-protein-conserved-in-bacteria
MNKKDVTIGFDLGIASVGWSIIDNKTNDILKLGSRLFQEREKAEDRRNFRNIRRRIRRRKYKKEKFINLDV
>LR215044.1|VEU81685.1|351135_351918_-|Uncharacterised-protein
MSKVLDYYNASGSERKIIDINNEWYKSYKQKKYDKLSAKAIYLIQTLSKLIISESYVQELKTNKVLLELFLMLLALSKKSVKEELKIEKITFQVLLNFGFKKTSLKLAIRKLCKMKIVNFENGVITLKRKNLRRKNEQYFVIKKDDNIKLFLLNGLETALMHINLKFKSKKLNGKRFTIKRNQTKIYYQTGYFSNFGWNRHKIYKLRKNVCKYLLVLFNQVFNVVRENFKVFEEKTYRGFCYKKFVGWGFSTKVYMLMRI
>LR215044.1|VEU81684.1|349585_350815_-|Uncharacterised-protein
MNNIKSNTFMKLEFAKFGLRKKANKDTGFVHDFEFYTSGTHLDYITRDSAVYLQDDNVNKSMLKDEFKTSKLSWREFLNSKVAENNKSLENKSGLYRLFADDPTDLDKTEEKKLLSKISTKQNVWEMIINLGENAVNNFCIDKFEWNDILNDNLKSLLQNNNINPNNITGHWVIHANTEFPHLHLQFWEKVSNVNNHYRSKGTFKKSSLFIFRELILKKLTKNEEYHKLLDTKKEIWSDRKSLKNIFELSNTYFSISKDINTIKTYLKDNHPIYSKAKENIRVKEAIWKVFDYASEANPEFKSQFDIYKNHIKDIKKQKFNDNFNKSLLDKFLADEEKELENQFGNLILKACKNFDLPKFKAFINNDNNSDIKWLMQKWEWELDNIYFQQKRDALAKFNKNIKVRGQLQ
>LR215044.1|VEU81683.1|347555_349586_-|conjugal-transfer-coupling-protein-TraG
MKKRTVLNDKTKIILSSIFSFVIWPAVAFFLIATLMLFIQTKSFKLVSEWIGQKRSYFNDVLNFWKINNTYRNLGILFIFIGSGLLMLIFNFHMVVNKLKNKIAKKRDEEFSQWLYNQITQEGNFNKFKKKFKLRIPNFILGNLALKKTRFNYYVNNSDAHAICLGISGSKKTEKVVIPNLHYNATLENDKKPNIIITDPKKQILSRTGNMFLENGYNITVFDFNDFQKSLCWNPLEKIWNTLHLKKLEDLTDIDYSLAFEQIYEIVNNLNFGNSANSSESTIWVDNGKNAVVAVLKFLLIYSLEDPKFELKYFTLANILPFLNLKEFKDGYWLKIIFWKQTKNIYWKKLFDEVYALSSTVKETLSGYLANAYKAVQVFSSNLNVNKITSNITFSIRKTIRDVSKPFVIFICFPDHKDIYNNLISLLITQIYQEAIDYANSLPSQKLKRMLQFYLEEFNSLYLPNIPDWMAISRSRNILFLLVIQDYEQLQKYTISGKSGKAIISQARLTYLLETNSMETLKAFSESLGQKIVERESTTKNKDNTSITISESKETLMSISDLKYKDADATIISSGGNKPILLNLKPAYEYLKYADYEHNTSYITIDNNETWDFSKMEPLSFSIHDEKTLYNRLEIADIKHTDININDEFLKAVSKLEDSREKLICSMNVNKEINNE
>LR215044.1|VEU81682.1|346582_347563_-|Uncharacterised-protein
MSNNEFNGNALDEDFSYDKSKSFEFQKKQHHEKVQQAILEVKDLISESKNSLPLISFILNSALKTYFRFNLINTIFLNNQLTTVSDVRTKREWEKMGGEVIDVDNPLQIISSFATNKDNNIFDNFKIQKVYDISQTSLFDQNLLENHIRDFYEKNYLIDEFFLNFFIKKLETLKKIKVEELDFQDFFRSMNKYSKFGNLKAVHSLNTKTIWINKSLDLQEKFKSITHEYLHLVNQDDYDKLTNGKNELIINLTEYIILGVLNIETNINFINEITNLEINDNFKDYYEILNSAIRLSKDTYDFFQEVFQNFLSQREKIIARFKLRNK
>LR215044.1|VEU81681.1|345787_346561_-|Modification-methylase-HpaI
MNKAYFNEDGFTLYLGDSIKLLKKIKPKSIDMIFADPPYFLSSGGVSCHSGRQVSVDKGDWDKTVTPEEKLSFNKKWIKLCRKVLKDNGTLWISGTLHNIYSIGVALELEGFSIINNITWQKTNPAPNLACRCFTHSTETILWARKQLTPKKKGNHYFDYQLMKEINDGKQMKDVWNIPLVYKNEKKYGKHPTQKPLPLLERILLAASKEGDLILDPFNGSGTTGIACKNLNRRYIGIDESKEYLDLTIKRFEENKI
>LR215044.1|VEU81680.1|345356_345530_-|Uncharacterised-protein
MDLYYDCWEKYRYGIFNNLNFGQLLESEEQDINSCLYINNNDDNSLTNDEDTLKFRM
>LR215044.1|VEU81690.1|356011_356860_+|tRNA-pseudouridine-synthase-B
MFFKINKKRGESSFFAIKKFAKLNNIKKIGHSGTLDPLADGLLIVATDEDTKTLSYLVNDTKEYYVKATLHCTSRSYDEGEEVIYLDNKTKVTKEQIEDVLKKIQKQTKQIPPIFSAKKINGQRSYDLARKNIEVTLKECEIKIYELTLKEFNFETQTFAIYAKVSKGTYIRSLIHDIGLMLNTDAVVNILRRCAIGKIKLNDSLEYEKIVDIKSLFNVELYTLNDFEVKLIKSKVLYLERLKNINNKGIFIYKNQIIGCGIIKNGLINFNKVLFNRIFQNP
>LR215044.1|VEU81691.1|356878_357685_+|HAD-hydrolase,-family-IIB
MNNNYKMIVFDIDGTLLPFGIDELTPRMKEMFRKLKENGYINVLCSGRDIFTVGKQIHNPYVDYFIGANGTFILDLKTNEYIFEQTIEYKDFVKFREFANKNQLSFSFVGDKWGYYNDLFNINHWFYLPYKDKFISEKEFESKDDKNYLITISTNKPEEWAKKLNEFFELNDMNMWVLATWNGGVFLSSKGITKAVGLDILGNLLDIKPEEMVAFGDSENDIEMLQHVGLGVAMGNGEDVTKNVANEICLPVTEDGPYFKLKEKGFYD
>LR215044.1|VEU81692.1|357732_358587_+|riboflavin-kinase
MKIFEWNFKEDFEIKEDLIMVLGSFETLHLGHYELIKIAKDIKISNPQTKLAIMIFNNTYKGALGLDKKAMQTQTRLYTLFNLGFDFVFLANINKENLNVSHEDFCKNLLLNKVKFVICGKDFKFGFRRLGNIEYLSKFFNVTVANERKIQKRKISSTLINELIEEGNIFAINNLLIEKYAFITNFNKFNFAFPNKIKKIKPGIYIANFVIDDIEYHGLIKISNDQNNENDNLAFLLDLEIIPSKYQDIFVELEALIRHINLDHENEIRDNDIELTKKWFINKN
>LR215044.1|VEU81693.1|358618_359347_-|triosephosphate-isomerase
MKYLIGNFKMNKTFLEVESYIDALTYLISENKQELKDLKIGIAPSFDSTYISYNNQTRNYLFGLQNIFHELNGAYTGEVSLNVAKEANIDFILVGHSERRKLFNETDELINKKILQLKNTNITAILCVGESLEEFESNQTFEVLEKQIKSALKNVHNYSNILISYEPVYCIGNGITPKAQHIQKVVDFIHELLEKSIPILYGGSVCCSSIDLLEQVEGLSGYLVGKASLNAYEFINLAKKIK
>LR215044.1|VEU81694.1|359394_359901_-|Uncharacterised-protein
MRNNLKKKPKLRSNNYWSRSWSKGNIAYFFISLILMSLLIFLTGYFKKQDSKVMTWSNAITVGCVLFIAIPIFVILIKKGFGKGLAFYFINIYHNHRISSRAKAKYTVSMNQFEKDKILNRERNLYNKEQNDKQKNKYLTESTNLASFLIIGISSLVLLVGLLSLHLS
>LR215044.1|VEU81695.1|359999_362507_-|phosphate-ABC-transporter-ATP-binding-protein
MTNKKDRKVILSIDNLKKYFVNQGIINKAVDGVSFDVHEGEIVGLIGESGSGKTTVGRTILRLYDDYNGFVRLEDKIISGKNISYSLKKYLRKNVQMIFQDPHASLNSQQNIYTILKEPLLVNGIMKHKINDIFKDWLDVKKTFKYTFQIQAMKLELQNYQEINRLAEPFFTKWKNIFNDFKFDNDLSREDNFSSFYAYLEEKQKMESMIINNMYSNASSLINFYYEMQKKYREKDLSPEELSYENALADYEEIKKLSKWSIKQLEIKNQLVKLLSERKELVKNHKQKTTESRNTFANFQVENKHEKGLVNIARLMSTDLDFYLYNLKNEYLFKARISTLKNLRNSLTLLEYEDVKELVKELENYVKNFYENELAKIEYSKTMRQEIITTLKEKFNFNFTKYTKISEANEAKFEKELFELDKQISALRNLLKIKETPEYSKEQLAEEHQKLKSAHDIYLQGRSRFLVDYKKLIDDLYQQINNEKQEYLRLVSEQEKCNNLYEKYKIEFNNFVKKQYQDKIEELNKRKTKVEVTLKENKDKEKLEKIKKDLKRINERIKQIKKDEDTVIKMYNSDIALKEDTLKSFNIERDYLKRDIKHIYLLLGIDYKWVELNLNKKNDENVNVETQKWAKRFNFFDYKISFPFAKYLISELLYKMIIYRSLEDVGLLKQFAYRYPHEFSGGQLQRIVIARALITEPKVIVADEPIASLDISIQAQVVNLLKDLCVQKNIGLIFIAHDLSMIEYVADNVQIMHLGKIVESGVTEAIYNNPLHPYTINLFKAIPKISNANEKFQNVSFNLDYIYEQQFPNIPENFQVDENHWIYGTKEQIEKWVKK
>LR215044.1|VEU81696.1|362496_363672_-|ABC-type-dipeptide/oligopeptide/nickel-transport-system-ATP-binding-protein-(DppD/OppD)
MADKELNKVKKNLKIKISKKSKTAQKRGHLFSKIQSQEVLEDNKLLEVRNLHVSFPVGRKKTIHIVRGVDLDVYRGQIVGLVGESGSGKSVTSKTLINVNENGLVSADKIQIGDLELSNILKKEKYWQLVRGQKIGYIPQDPLTSLNPTRTIGKQLLDALNNNVDWMDKTYTEKKEYLLGLLSTFGLRNVDKIFSAYPHTLSGGMKQRIVITMVVALKPDLIIADEPTTALDPTVQASVLALFEEIRQKMGISIILISHNISVIAKFCDFIYVMYAGRIVEKGLKEEIFTRPAHPYTWALISAIPESKDEKLYNIKGTPPDMANLPVGDPFAPRNDYALEIDFIKEPPLIPITQTHAAATWLLSPEAPKIELSKDLQKRLDLFKKAFQNDK
>LR215044.1|VEU81697.1|363674_364985_-|Dipeptide-transport-system-permease-protein-dppC
MENNLENQIKDFNKQYKISSELSKKFGFISEKDKVQTSSIAGRPKKMWIEITKRFFSNPVVVVSLLVFTFILLASLIIPAKSVSPYPPNQPINQYTFIESLPPMYSPIVIKAGTNTDPIFKFYFNLKSDISKLSEADQQLWNQWFSFYLNTTNVYANDQGQLFISYNAYHLFRAGVLNELLHNAQKEGITLTNEYVQGEILPQIPYLKTLLGTSSTGYDIWVTTWYATWRGIQIAIITTIIQAIFGVTLGAILGFYAGKLIDTLIMRLIDIFNSPPTIIWILIFVGIFGTNQISLILAMSVAGWPLFVGLTRMYVITVKNEEYITAAKAIGASSSRQIFVHALPAIIGKIANSFVKNVPGVILWVASLAFLGFFKTGNDTNLGQILIESASEAGQNIWIILLPTLILLFLSLSLNFMALGIHDALDPRVMSKGKKK
>LR215044.1|VEU81698.1|365008_366136_-|oligopeptide-ABC-transporter-permease
MFKYITQRIAFAILTLFIITFVVFILVSVFGQSPIKAIVEKELANPKNKHTYEELILENEIIFGLRYADGTPIPIFVRYFIYIGNVFSGDFGFIINKENNPSPSEYTNIQLLFFTPLKYSIRITLPAFIVSSISGITIGVFAGYKRGKLFDSGANLFVLIFVAVPSFVLAPILITISLKIGIPTTVPRDALEPSFGELFISYLPPVLIITLTSMAVYVSYTRNQVITVLTSNYVLIAKTKGLKPTQIFFKYVLRNISIPLFSLLFGSFLGLLSGSIIIEKYWDVPGTSQVIARSFPTGEINIIMFSTIFFTGLALASSIFVDVMFAVLDPKITYAAKNKKNYWLFFKAFLERRKLEKDLYLKRQLEKQNQLGQQS
>LR215044.1|VEU81699.1|366142_368926_-|Uncharacterised-protein
MKKSNKIWLSSLSLLAGAVPLLAVACKDPEAKNKYVFEYSSPYNPQAFLHDASRSYGSFISTSTTQHTSVGLVRIESIGEPEVQSKVIVDESGNVKDTKRYIINPTWTKRSLALASAVVVTDNNGTVTTFDSDEAEVKTPANAQENGVQYYTSPSVELKSNNEKSINSANFESKLKTAKKLQFVVRRGVHWTNEQGEATKYEIKAKDFYYSWLRTLSVNQSYRIENGGSEELDKQAAEALSDPSSVAFTDKENYSNDYLFTLFGIDHKKFSVENQFIQKVGEEEAVTFEKIEGKETANFNEFFSKSILQDYTFAPAPSEYIDEANQTGNYPIYNYIGTQTDKTTALVEKIKALDKTSKTYISGAYWYGVSLKNTLYSGAYYIAPQKGQELVLKKNKNYYDKAFVESKNTIEQIVNIYNQGLDVDTFAKRVFDKYKQGKLSQISFSQLKENQRAEILNDAVKYGLRYTKVVNKKSPYYRNFSQPFIKPIPTGQNVSFYGFNDAYAKLVYGSTREELKTGTNDPASYISGKGLIFRSLLNAAINWDELASQATNGQAFAWIAKVADGSAIGGSDQSSSKFKTPGDVRERINSLFALKADGSGKIDFGGSLGKELSPSENEEAAKNLSTKTEKLKSAGFELIKEQLAALIAEFDKENPTLAGQNFEFEYAFPYVNIPAGYKVAFANIVQTFKELNPRLAITVFSTDNKDDPKFDNYRTGGANGTEFVAWSYDYDSIGSGYDGLSWGANFIPTLTWIAANDANDKNKLIKENYPKLYKLAKDIVEYSKKPTHEWVGSVPFDELHLVENRFKSQRLPYTANYEFKKNEKGFYTLERTAEGKPKPWVAPEGKHETEAYAWTAEFWLNYIHEKTNEYAIGLMEELTSFFNVNFTFNTFKQRNEFGQSLVEKKFIVPDESVTGVSIFSDWKIKNN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
LR215044_2	2.8\|355005\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355005-355034	30	LR215044.1	278807-278836	0	1.0
LR215044_2	2.19\|355731\|31\|LR215044\|CRISPRCasFinder,CRT	355731-355761	31	LR215044.1	337098-337128	2	0.935

1. spacer 2.8|355005|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to position: 278807-278836, mismatch: 0, identity: 1.0

gattcccttgctgaacctaataaataatcc	CRISPR spacer
gattcccttgctgaacctaataaataatcc	Protospacer
******************************

2. spacer 2.19|355731|31|LR215044|CRISPRCasFinder,CRT matches to position: 337098-337128, mismatch: 2, identity: 0.935

tatattctattagaattgcgaacattactaa	CRISPR spacer
tatatcctattagaattgcgaacatcactaa	Protospacer
*****.*******************.*****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MF288920	Bacillus phage Zainny, complete genome	156362-156391	4	0.867
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_031024	Bacillus phage Belinda, complete genome	155553-155582	4	0.867
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MN693410	Marine virus AFVG_25M169, complete genome	15515-15544	5	0.833
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MT074137	Bacteroides phage DAC16, complete genome	116314-116343	5	0.833
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MN692958	Marine virus AFVG_117M8, complete genome	11642-11671	5	0.833
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MN694278	Marine virus AFVG_250M229, complete genome	11625-11654	5	0.833
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MF417895	Uncultured Caudovirales phage clone 10AX_1, partial genome	13633-13662	5	0.833
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MF417909	Uncultured Caudovirales phage clone 10F_7, partial genome	4656-4685	5	0.833
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MH319754	Marine virus AG-345-L05 Ga0172272_11 genomic sequence	10335-10364	5	0.833
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	CP016969	Staphylococcus epidermidis strain DAR1907 plasmid unnamed1, complete sequence	10970-10999	5	0.833
LR215044_2	2.6\|354873\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354873-354902	30	LC168164	Tenacibaculum phage pT24 DNA, complete genome	201811-201840	5	0.833
LR215044_2	2.2\|354609\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354609-354638	30	CP008939	Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence	159146-159175	6	0.8
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_CP025427	Enterococcus faecium strain SC4 plasmid p2, complete sequence	127193-127222	6	0.8
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	AY855346	Clostridium difficile bacteriophage phi CD119, complete genome	4818-4847	6	0.8
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NC_007917	Clostridium phage phi CD119, complete genome	4818-4847	6	0.8
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NC_028996	Clostridium phage phiCDHM19, complete genome	5065-5094	6	0.8
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	MN693637	Marine virus AFVG_250M988, complete genome	31818-31847	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP016726	Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08A, complete sequence	32239-32268	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	489293-489322	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MF417900	Uncultured Caudovirales phage clone 8AX_1, partial genome	15759-15788	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MF417930	Uncultured Caudovirales phage clone 3S_1, partial genome	19840-19869	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	AP014053	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S29-C16, * SEQUENCING IN PROGRESS *	5054-5083	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MF417899	Uncultured Caudovirales phage clone 7S_8, partial genome	26185-26214	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	AP014056	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S41-C215, * SEQUENCING IN PROGRESS *	3246-3275	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MN693311	Marine virus AFVG_25M388, complete genome	14834-14863	6	0.8
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	AP014058	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S42-C22, * SEQUENCING IN PROGRESS *	34613-34642	6	0.8
LR215044_2	2.7\|354939\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354939-354968	30	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	465128-465157	6	0.8
LR215044_2	2.7\|354939\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354939-354968	30	MN693412	Marine virus AFVG_25M431, complete genome	2805-2834	6	0.8
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	KJ094026	Listeria phage LP-032 contig 3, partial genome	6587-6616	6	0.8
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	NC_021787	Listeria phage LP-037, complete genome	8238-8267	6	0.8
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	JX442241	Listeria phage P70, complete genome	58345-58374	6	0.8
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	KJ094020	Listeria phage LP-026, complete genome	34586-34615	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT786458	Staphylococcus phage vB_SauH_SAP1, complete genome	83555-83584	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MG721208	Staphylococcus phage vB_SauM_LM12, complete genome	43762-43791	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT080601	UNVERIFIED: Staphylococcus phage vB_SauM_EW72, complete genome	70113-70142	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN304941	Staphylococcus phage vB_SauH_IME522, complete genome	76568-76597	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT080589	UNVERIFIED: Staphylococcus phage vB_SauM_EW26, complete genome	82223-82252	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MG557618	Staphylococcus phage HSA30, complete genome	60850-60879	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	LR215718	Staphylococcus phage Stab20 genome assembly, chromosome: I	104053-104082	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT080585	UNVERIFIED: Staphylococcus phage vB_SauM_EW18, complete genome	101242-101271	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KY779849	Staphylococcus phage qdsa002, complete genome	106023-106052	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MF001365	Staphylococcus phage SA3, partial genome	77791-77820	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MH159197	Staphylococcus phage VB_SavM_JYL01, complete genome	76016-76045	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250904	Staphylococcus phage VB-SavM-JYL02, complete genome	74588-74617	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT080591	UNVERIFIED: Staphylococcus phage vB_SauM_EW29, complete genome	97778-97807	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_025416	Staphylococcus phage MCE-2014, complete genome	104674-104703	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KM216423	Staphylococcus phage P108, complete genome	41122-41151	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_028765	Staphylococcus phage phiIPLA-RODI, complete genome	98769-98798	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT554104	Staphylococcus phage ESa1, complete genome	103240-103269	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_019448	Staphylococcus phage GH15, complete genome	102662-102691	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP024320	Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence	8205-8234	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP024354	Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence	19853-19882	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP024374	Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence	24036-24065	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP024393	Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence	23966-23995	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP024208	Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence	24004-24033	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP024336	Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence	24151-24180	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP024355	Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence	24004-24033	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP009067	Borreliella afzelii K78 plasmid lp38, complete sequence	12353-12382	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP044176	Campylobacter coli strain AR-0411 plasmid pAR-0411, complete sequence	93576-93605	6	0.8
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP040614	Campylobacter sp. CFSAN093246 plasmid unnamed, complete sequence	47030-47059	6	0.8
LR215044_2	2.2\|354609\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354609-354638	30	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	104215-104244	7	0.767
LR215044_2	2.2\|354609\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354609-354638	30	NC_014634	Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence	119605-119634	7	0.767
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_CP038863	Campylobacter jejuni strain SCJK2 plasmid unnamed1, complete sequence	16975-17004	7	0.767
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	60352-60381	7	0.767
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	578402-578431	7	0.767
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	578450-578479	7	0.767
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_CP045289	Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff2, complete sequence	19285-19314	7	0.767
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	63574-63603	7	0.767
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	MH487649	Bacillus phage BC01, complete genome	74221-74250	7	0.767
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	MF360957	Bacillus virus PBS1, complete genome	104720-104749	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP011405	Lactobacillus salivarius str. Ren plasmid pR2, complete sequence	36872-36901	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_AP014819	Geminocystis sp. NIES-3708 plasmid pGM04, complete sequence	3189-3218	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP032741	Acinetobacter baumannii strain C25 plasmid unnamed1	15197-15226	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP020580	Acinetobacter baumannii strain SSMA17 plasmid pSSMA17_1, complete sequence	27375-27404	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	CP007580	Acinetobacter baumannii AC30 plasmid pAC30c, complete sequence	9877-9906	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP020582	Acinetobacter baumannii strain JBA13 plasmid pJBA13_1, complete sequence	79197-79226	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	AP013484	Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S36-C79	5950-5979	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP021787	Acinetobacter baumannii strain A85 plasmid pA85-3, complete sequence	29029-29058	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_MG954379	Acinetobacter baumannii strain SGH0905 plasmid pS32-2, complete sequence	30338-30367	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MK531538	Acinetobacter baumannii strain MC23 plasmid pMC23.1, complete sequence	27554-27583	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NC_025109	Acinetobacter baumannii strain A85 plasmid pA85-3 clone GC1 AbaR4 resistance island, complete sequence	29030-29059	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP017649	Acinetobacter baumannii strain KAB04 plasmid unnamed, complete sequence	87456-87485	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP050915	Acinetobacter baumannii strain DT-Ab007 plasmid unnamed1, complete sequence	51527-51556	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP050909	Acinetobacter baumannii strain DT-Ab022 plasmid unnamed2, complete sequence	29038-29067	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP017651	Acinetobacter baumannii strain KAB05 plasmid unnamed, complete sequence	4970-4999	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	CP032137	Acinetobacter haemolyticus strain sz1652 plasmid unnamed2, complete sequence	22257-22286	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NC_015418	Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence	53307-53336	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP019115	Acinetobacter baumannii strain MDR-CQ plasmid pMDR-CQ, complete sequence	581-610	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	CP002524	Acinetobacter baumannii TCDC-AB0715 plasmid p2ABTCDC0715, complete sequence	59385-59414	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP017653	Acinetobacter baumannii strain KAB06 plasmid unnamed, complete sequence	25355-25384	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_MG954377	Acinetobacter baumannii strain SGH9601 plasmid pS21-2, complete sequence	29304-29333	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP038264	Acinetobacter baumannii strain LEV1449/17Ec plasmid pEC_gr6, complete sequence	16708-16737	7	0.767
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	AP013483	Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S30-C71	26004-26033	7	0.767
LR215044_2	2.8\|355005\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355005-355034	30	MH837543	Lactobacillus phage LR2, complete genome	1713-1742	7	0.767
LR215044_2	2.9\|355071\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355071-355100	30	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	7000-7029	7	0.767
LR215044_2	2.10\|355137\|31\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355137-355167	31	HQ634148	Synechococcus phage S-CBS4, * SEQUENCING IN PROGRESS *, 2 unordered pieces	101520-101550	7	0.774
LR215044_2	2.10\|355137\|31\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355137-355167	31	HQ698895	Synechococcus phage S-CBS4, complete genome	4031-4061	7	0.774
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	NZ_LR134421	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 12	50875-50904	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT787017	UNVERIFIED: Staphylococcus phage WV, complete genome	40255-40284	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN935200	UNVERIFIED: Staphylococcus phage VTCCBPA116 genomic sequence	85349-85378	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	694856-694885	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	28259-28288	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	238595-238624	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KX011028	Staphylococcus phage pSco-10, complete genome	32750-32779	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP016596	Bacillus cereus strain K8 plasmid pBCM301, complete sequence	144304-144333	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP019364	Borrelia turicatae 91E135 isolate Oz1 plasmid lpB34, complete sequence	24946-24975	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	227486-227515	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP015635	Borrelia turicatae strain BTE5EL plasmid lp44	26497-26526	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MF001355	Proteus phage PM2, partial genome	73190-73219	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KP890823	Proteus phage vB_PmiM_Pm5461, complete genome	88310-88339	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_014172	Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence	77148-77177	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP009595	Bacillus cereus strain 3a plasmid pBFC_3, complete sequence	240430-240459	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP009606	Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence	106665-106694	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP053994	Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence	180436-180465	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_017237	Borreliella afzelii PKo plasmid lp38, complete sequence	11063-11092	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP053992	Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence	163452-163481	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	218202-218231	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250021	Prevotella phage Lak-B2, complete genome	28789-28818	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MH107769	Staphylococcus phage vB_SauM_0414_108, complete genome	102501-102530	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250024	Prevotella phage Lak-B5, complete genome	27859-27888	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250028	Prevotella phage Lak-B9, complete genome	28787-28816	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250023	Prevotella phage Lak-B4, complete genome	28810-28839	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250025	Prevotella phage Lak-B6, complete genome	27843-27872	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KY794641	Staphylococcus phage vB_Sau_CG, complete genome	62445-62474	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250022	Prevotella phage Lak-B3, complete genome	27858-27887	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	LR215719	Staphylococcus phage Stab21 genome assembly, chromosome: I	105939-105968	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250027	Prevotella phage Lak-B8, complete genome	28810-28839	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN694372	Marine virus AFVG_250M1157, complete genome	9794-9823	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250026	Prevotella phage Lak-B7, complete genome	28810-28839	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_023573	Staphylococcus phage phiSA012 DNA, complete genome	97771-97800	7	0.767
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK250020	Prevotella phage Lak-B1, complete genome	28767-28796	7	0.767
LR215044_2	2.2\|354609\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354609-354638	30	NZ_MF788071	Raoultella ornithinolytica strain 23141 plasmid p23141-3, complete sequence	221376-221405	8	0.733
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	53784-53813	8	0.733
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	CP016197	Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-3, complete sequence	51575-51604	8	0.733
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP032091	Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence	278863-278892	8	0.733
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP038263	Acinetobacter baumannii strain LEV1449/17Ec plasmid pEC_gr13, complete sequence	8974-9003	8	0.733
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP028139	Acinetobacter baumannii strain NCIMB 8209 plasmid pAbNCIMB8209_134, complete sequence	10560-10589	8	0.733
LR215044_2	2.5\|354807\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354807-354836	30	NZ_CP030362	Salinibacter ruber strain SP73 plasmid pSR16, complete sequence	13444-13473	8	0.733
LR215044_2	2.13\|355336\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355336-355365	30	MK496805	Capybara microvirus Cap3_SP_478, complete genome	3075-3104	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP022446	Bacillus cereus C1L plasmid pC1L1, complete sequence	105501-105530	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP020540	Sphingobium herbicidovorans strain MH plasmid pSHV1, complete sequence	308739-308768	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	343474-343503	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	76494-76523	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP050184	Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence	123414-123443	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK584893	Staphylococcus phage vBSM-A1, complete genome	37456-37485	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN539738	UNVERIFIED: Staphylococcus phage vB_SauM-D, complete genome	53430-53459	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT080600	UNVERIFIED: Staphylococcus phage vB_SauM_EW71, complete genome	14227-14256	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_019726	Staphylococcus phage JD007, complete genome	127432-127461	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_047721	Staphylococcus phage SA5, complete genome	107245-107274	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KR908644	Staphylococcus phage IME-SA119, complete genome	82681-82710	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MG696114	Proteus phage phiP4-3, complete genome	74970-74999	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MH136584	Staphylococcus phage HYZ21, complete genome	99275-99304	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	597022-597051	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	286206-286235	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP007513	Bacillus bombysepticus plasmid pBb, complete genome	404066-404095	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	370444-370473	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN539736	UNVERIFIED: Staphylococcus phage vB_SauM-A, complete genome	64828-64857	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KY581279	Staphylococcus phage pSa-3, complete genome	99762-99791	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT411892	Staphylococcus phage Metroid, complete genome	101061-101090	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KJ206562	Staphylococcus phage 812 isolate host-range mutant 812F1, complete genome	100869-100898	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	AP018375	Staphylococcus phage phiSA039 DNA, complete genome	93255-93284	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK417514	Staphylococcus virus Sa83, complete genome	102699-102728	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN336263	Staphylococcus phage Sb1M_9832, complete genome	95169-95198	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_048665	Clostridium phage phiCDHM14, complete genome	28060-28089	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN336262	Staphylococcus phage Sb1M_6168, complete genome	95169-95198	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK295204	Shigella phage vB_SdyM_006, complete genome	90763-90792	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	AY954969	Bacteriophage G1, complete genome	60288-60317	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK331931	Staphylococcus phage Sa30, complete genome	103043-103072	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KJ206563	Staphylococcus phage 812 isolate host-range mutant K1/420, complete genome	100805-100834	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	JX080302	Staphylococcus phage 676Z, complete genome	105089-105118	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN045228	Staphylococcus phage Maine, complete genome	102674-102703	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN047438	Staphylococcus phage vB_SauM-515A1	103467-103496	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MF405094	Staphylococcus phage JA1, complete genome	103604-103633	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN336261	Staphylococcus phage Sb1_8383, complete genome	95169-95198	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN539737	UNVERIFIED: Staphylococcus phage vB_SauM-C, complete genome	64772-64801	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	EU418428	Staphylococcus phage A5W, complete genome	102167-102196	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KP687431	Staphylococcus phage IME-SA1, complete genome	76848-76877	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK417516	Staphylococcus virus J-Sa36, complete genome	102185-102214	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MT080602	UNVERIFIED: Staphylococcus phage vB_SauM_EW74, complete genome	56021-56050	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	JX145342	Clostridium phage phiMMP04, complete genome	27028-27057	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KJ206561	Staphylococcus phage 812 isolate host-range mutant K1, complete genome	102277-102306	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KP687432	Staphylococcus phage IME-SA2, complete genome	95164-95193	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_047722	Staphylococcus phage Staph1N, complete genome	102164-102193	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	HG796225	Clostridium phage phiCDHM13 complete genome	28094-28123	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KY794643	Staphylococcus phage vB_Sau_S24, complete genome	62123-62152	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_047723	Staphylococcus phage A3R, complete genome	104042-104071	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_047720	Staphylococcus phage ISP complete genome	60288-60317	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	JX080303	Staphylococcus phage Fi200W, complete genome	105051-105080	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MG656408	Staphylococcus phage B1, complete genome	104036-104065	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KF766114	Staphylococcus phage K, complete genome	102188-102217	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KR902361	Staphylococcus phage IME-SA118, complete genome	109942-109971	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MH844529	Staphylococcus phage 812h1, complete genome	105075-105104	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KC012913	Staphylococcus phage Team1, complete genome	104005-104034	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK331930	Staphylococcus phage CH1, complete genome	62737-62766	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	LR215720	Staphylococcus phage Stab23 genome assembly, chromosome: I	102485-102514	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	JX080305	Staphylococcus phage P4W, complete genome	104146-104175	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	KJ206560	Staphylococcus phage 812 isolate host-range mutant 812a, complete genome	102391-102420	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MF398190	Staphylococcus phage vB_SauM-fRuSau02, complete genome	104054-104083	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	EF136589	Staphylococcus phage 812 strain phi812 putative exonuclease, hypothetical protein, putative nuclease, hypothetical protein, putative primase, hypothetical proteins, putative ribonucleotide reduction-related protein, putative ribonucleotide reductase large subunit, putative ribonucleotide reductase minor subunit, hypothetical protein, putative oxidoreductase, hypothetical protein, and putative integration host factor genes, complete cds; and hypothetical protein gene, partial cds	11788-11817	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	LN681538	Clostridium phage phiCD481-1, complete genome	27829-27858	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MK417515	Staphylococcus virus Sa87, complete genome	103516-103545	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MH844528	Staphylococcus phage 812, complete genome	104193-104222	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_007066	Staphylococcus phage G1, complete genome	60288-60317	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	HG798901	Clostridium phage phiCDHM11 complete genome	28091-28120	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	JX080304	Staphylococcus phage MSA6, complete genome	104017-104046	8	0.733
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NC_023009	Staphylococcus phage Sb-1, complete genome	95683-95712	8	0.733
LR215044_2	2.15\|355468\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355468-355497	30	NZ_CP041065	Bacillus megaterium strain KNU-01 plasmid pKNU_01_2, complete sequence	49743-49772	8	0.733
LR215044_2	2.15\|355468\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355468-355497	30	NZ_CP018875	Bacillus megaterium strain JX285 plasmid unnamed2, complete sequence	146681-146710	8	0.733
LR215044_2	2.16\|355534\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355534-355563	30	NZ_CP018322	Alteromonas macleodii strain Te101 plasmid pTE101a, complete sequence	143651-143680	8	0.733
LR215044_2	2.17\|355600\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355600-355629	30	MT774388	CrAssphage cr112_1, complete genome	72483-72512	8	0.733
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NC_020237	Staphylococcus hyicus plasmid pSTE1 complete sequence	9614-9643	9	0.7
LR215044_2	2.3\|354675\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354675-354704	30	NZ_CP014695	Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 plasmid paadD, complete sequence	2127-2156	9	0.7
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MK250029	Prevotella phage Lak-C1, complete genome	94291-94320	9	0.7
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MK250016	Prevotella phage Lak-A1, complete genome	133759-133788	9	0.7
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	MK250019	Prevotella phage Lak-A2, complete genome	56806-56835	9	0.7
LR215044_2	2.4\|354741\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354741-354770	30	NZ_CP020439	Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence	136932-136961	9	0.7
LR215044_2	2.7\|354939\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354939-354968	30	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	182354-182383	9	0.7
LR215044_2	2.7\|354939\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	354939-354968	30	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	62739-62768	9	0.7
LR215044_2	2.9\|355071\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355071-355100	30	MT774393	CrAssphage cr127_1, complete genome	82730-82759	9	0.7
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	NZ_CP026684	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM2, complete sequence	69986-70015	9	0.7
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	MT074137	Bacteroides phage DAC16, complete genome	91339-91368	9	0.7
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	MT074142	Bacteroides phage DAC23, complete genome	95188-95217	9	0.7
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	MT074141	Bacteroides phage DAC22, complete genome	96427-96456	9	0.7
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	MT074146	Bacteroides phage SJC03, complete genome	85813-85842	9	0.7
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	MT074139	Bacteroides phage DAC19, complete genome	96199-96228	9	0.7
LR215044_2	2.12\|355270\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355270-355299	30	MT074140	Bacteroides phage DAC20, complete genome	96198-96227	9	0.7
LR215044_2	2.13\|355336\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355336-355365	30	MN694154	Marine virus AFVG_250M77, complete genome	15299-15328	9	0.7
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP049297	Bacillus megaterium strain S188 plasmid pS188, complete sequence	46946-46975	9	0.7
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MW057858	Providencia phage PSTCR6, complete genome	127332-127361	9	0.7
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	MN013084	Klebsiella phage vB_KaeM_KaAlpha, complete genome	98966-98995	9	0.7
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	LT614807	Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I	96195-96224	9	0.7
LR215044_2	2.14\|355402\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355402-355431	30	NZ_CP047395	Bacillus vietnamensis strain 151-6 plasmid p6, complete sequence	35404-35433	10	0.667
LR215044_2	2.16\|355534\|30\|LR215044\|PILER-CR,CRISPRCasFinder,CRT	355534-355563	30	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	184192-184221	10	0.667

1. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF288920 (Bacillus phage Zainny, complete genome) position: , mismatch: 4, identity: 0.867

taaagaattaaaagaggttattg-aatggta	CRISPR spacer
gaaagaattaaaagcggttgttgaaatggt-	Protospacer
 ************* ****.*** ******

2. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_031024 (Bacillus phage Belinda, complete genome) position: , mismatch: 4, identity: 0.867

taaagaattaaaagaggttattg-aatggta	CRISPR spacer
gaaagaattaaaagcggttgttgaaatggt-	Protospacer
 ************* ****.*** ******

3. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN693410 (Marine virus AFVG_25M169, complete genome) position: , mismatch: 5, identity: 0.833

ttttttatcatcattttttttacctaattt	CRISPR spacer
aatgttataaccattttttttacctaattt	Protospacer
  * **** *.*******************

4. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 5, identity: 0.833

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttttttatcattattttttttatcactttt	Protospacer
***********.**********.*   ***

5. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN692958 (Marine virus AFVG_117M8, complete genome) position: , mismatch: 5, identity: 0.833

ttttttatcatcattttttttac--ctaattt	CRISPR spacer
ttttttatcaccatattttttacgaccaat--	Protospacer
**********.*** ********  *.***

6. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN694278 (Marine virus AFVG_250M229, complete genome) position: , mismatch: 5, identity: 0.833

ttttttatcatcattttttttac--ctaattt	CRISPR spacer
ttttttatcaccatattttttacgaccaat--	Protospacer
**********.*** ********  *.***

7. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF417895 (Uncultured Caudovirales phage clone 10AX_1, partial genome) position: , mismatch: 5, identity: 0.833

ttttttatcatcattttttttacctaattt--	CRISPR spacer
ttttttatcatcatctttttt--cgaattgtc	Protospacer
**************.******  * ****

8. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF417909 (Uncultured Caudovirales phage clone 10F_7, partial genome) position: , mismatch: 5, identity: 0.833

ttttttatcatcattttttttacctaattt--	CRISPR spacer
ttttttatcatcatctttttt--cgaattgtc	Protospacer
**************.******  * ****

9. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MH319754 (Marine virus AG-345-L05 Ga0172272_11 genomic sequence) position: , mismatch: 5, identity: 0.833

ttttttatcatca-ttttttttacctaattt	CRISPR spacer
ttttttatcatcagtttttttcttcttatt-	Protospacer
************* *******. .** ***

10. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to CP016969 (Staphylococcus epidermidis strain DAR1907 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

ttttttatcatcattttttttacctaattt--	CRISPR spacer
ttttttatcatcatctttttt--cgaattgtc	Protospacer
**************.******  * ****

11. spacer 2.6|354873|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to LC168164 (Tenacibaculum phage pT24 DNA, complete genome) position: , mismatch: 5, identity: 0.833

aataaatcactcatcaggattatt--ataacc	CRISPR spacer
tataaatgaatcatcaggattattggataa--	Protospacer
 ****** * **************  ****

12. spacer 2.2|354609|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to CP008939 (Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence) position: , mismatch: 6, identity: 0.8

aataattaaaaggtttataaa-aggcaagcg	CRISPR spacer
aataattaaaagatttataaatatgataac-	Protospacer
************.******** * *  *.*

13. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025427 (Enterococcus faecium strain SC4 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.8

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
gttaaagaaaataaggaagtagaagattat	Protospacer
.*************.**** **** *  **

14. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 6, identity: 0.8

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
gttaaagaagctaaagaaggagaaaattat	Protospacer
.********. ************* *  **

15. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 6, identity: 0.8

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
gttaaagaagctaaagaaggagaaaattat	Protospacer
.********. ************* *  **

16. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 6, identity: 0.8

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
gttaaagaagctaaagaaggagaaaattat	Protospacer
.********. ************* *  **

17. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN693637 (Marine virus AFVG_250M988, complete genome) position: , mismatch: 6, identity: 0.8

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
aataaagaaaataaagaaaaagaatggcag	Protospacer
* ****************..*****.* *

18. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016726 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08A, complete sequence) position: , mismatch: 6, identity: 0.8

ttttttatcatcattttttttacctaattt---	CRISPR spacer
ctttttctcatcattttttttact---tttaaa	Protospacer
.***** ****************.   ***

19. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 6, identity: 0.8

ttttttatcatcatttt-ttttacctaattt	CRISPR spacer
ttttttatcatcattttgtttcatataaaa-	Protospacer
***************** ***.*. ***

20. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF417900 (Uncultured Caudovirales phage clone 8AX_1, partial genome) position: , mismatch: 6, identity: 0.8

ttttttatcatcattttttttacctaattt--	CRISPR spacer
ttttttatcatcatctttttt--cgagttgtc	Protospacer
**************.******  * *.**

21. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF417930 (Uncultured Caudovirales phage clone 3S_1, partial genome) position: , mismatch: 6, identity: 0.8

ttttttatcatcattttttttacctaattt--	CRISPR spacer
ttttttatcatcatctttttt--cgagttgtc	Protospacer
**************.******  * *.**

22. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to AP014053 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S29-C16, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttctttatcatcattttttttccgttcttc	Protospacer
**.****************** * *  **.

23. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF417899 (Uncultured Caudovirales phage clone 7S_8, partial genome) position: , mismatch: 6, identity: 0.8

ttttttatcatcattttttttacctaattt--	CRISPR spacer
ttttttatcatcatctttttt--cgagttgtc	Protospacer
**************.******  * *.**

24. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to AP014056 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S41-C215, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttctttatcatcattttttttccgttcttc	Protospacer
**.****************** * *  **.

25. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN693311 (Marine virus AFVG_25M388, complete genome) position: , mismatch: 6, identity: 0.8

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttttttatcatcaatttttttcaaaacttt	Protospacer
************* *******    * ***

26. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to AP014058 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C12B-MedDCM-OCT-S42-C22, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttctttatcatcattttttttccgttcttc	Protospacer
**.****************** * *  **.

27. spacer 2.7|354939|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 6, identity: 0.8

tatttaaataattcccattaatatagtcat	CRISPR spacer
tatcgttatcattcccattaaaatagtcat	Protospacer
***.   ** *********** ********

28. spacer 2.7|354939|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN693412 (Marine virus AFVG_25M431, complete genome) position: , mismatch: 6, identity: 0.8

tatttaaataattcccattaatatagtcat	CRISPR spacer
aaatttcataattcccattaaaataatcat	Protospacer
 * **  ************** ***.****

29. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 6, identity: 0.8

gatatttattgaagattgtttggataaact	CRISPR spacer
gaaacagattgacgattgtttggataatct	Protospacer
** *.  ***** ************** **

30. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 6, identity: 0.8

gatatttattgaagattgtttggataaact	CRISPR spacer
gaaacagattgacgattgtttggataatct	Protospacer
** *.  ***** ************** **

31. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 6, identity: 0.8

gatatttattgaagattgtttggataaact	CRISPR spacer
gaaacagattgacgattgtttggataatct	Protospacer
** *.  ***** ************** **

32. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 6, identity: 0.8

gatatttattgaagattgtttggataaact	CRISPR spacer
gaaacagattgacgattgtttggataatct	Protospacer
** *.  ***** ************** **

33. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT786458 (Staphylococcus phage vB_SauH_SAP1, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

34. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MG721208 (Staphylococcus phage vB_SauM_LM12, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

35. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT080601 (UNVERIFIED: Staphylococcus phage vB_SauM_EW72, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagaat	Protospacer
**********.*************  *.

36. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN304941 (Staphylococcus phage vB_SauH_IME522, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

37. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT080589 (UNVERIFIED: Staphylococcus phage vB_SauM_EW26, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagaat	Protospacer
**********.*************  *.

38. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MG557618 (Staphylococcus phage HSA30, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

39. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to LR215718 (Staphylococcus phage Stab20 genome assembly, chromosome: I) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

40. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT080585 (UNVERIFIED: Staphylococcus phage vB_SauM_EW18, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagaat	Protospacer
**********.*************  *.

41. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KY779849 (Staphylococcus phage qdsa002, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

42. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF001365 (Staphylococcus phage SA3, partial genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

43. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MH159197 (Staphylococcus phage VB_SavM_JYL01, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

44. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250904 (Staphylococcus phage VB-SavM-JYL02, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

45. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT080591 (UNVERIFIED: Staphylococcus phage vB_SauM_EW29, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagaat	Protospacer
**********.*************  *.

46. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_025416 (Staphylococcus phage MCE-2014, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagaat	Protospacer
**********.*************  *.

47. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KM216423 (Staphylococcus phage P108, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

48. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_028765 (Staphylococcus phage phiIPLA-RODI, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

49. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT554104 (Staphylococcus phage ESa1, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

50. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_019448 (Staphylococcus phage GH15, complete genome) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattagaagaggttattgatagact	Protospacer
**********.*************  *..

51. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024320 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagagtga	Protospacer
***************. *******. *  *

52. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024354 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagagtga	Protospacer
***************. *******. *  *

53. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024374 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagagtga	Protospacer
***************. *******. *  *

54. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024393 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagagtga	Protospacer
***************. *******. *  *

55. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024208 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagagtga	Protospacer
***************. *******. *  *

56. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024336 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagagtga	Protospacer
***************. *******. *  *

57. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024355 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagagtga	Protospacer
***************. *******. *  *

58. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009067 (Borreliella afzelii K78 plasmid lp38, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagagggttttggctgtaa	Protospacer
***************** * ***. **  *

59. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044176 (Campylobacter coli strain AR-0411 plasmid pAR-0411, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
catagtattaaaagaggttattcaatatta	Protospacer
.* ** **************** ***. **

60. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040614 (Campylobacter sp. CFSAN093246 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

taaagaattaaaagaggttattgaatggta	CRISPR spacer
catagtattaaaagaggttattcaatatta	Protospacer
.* ** **************** ***. **

61. spacer 2.2|354609|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 7, identity: 0.767

aataattaaaaggtttataaaaggcaagcg	CRISPR spacer
aataagtaaaaggtttataaaagagagtat	Protospacer
***** *****************. *.

62. spacer 2.2|354609|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_014634 (Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequence) position: , mismatch: 7, identity: 0.767

aataattaaaaggtttataaaag-gcaagcg	CRISPR spacer
aataatgaaaaggtttacaaaagcattggc-	Protospacer
****** **********.***** .. .**

63. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038863 (Campylobacter jejuni strain SCJK2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
tataaagaaaataataaaggagaataaatg	Protospacer
  ************ .**********.*

64. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 7, identity: 0.767

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
aattaaaaaaataaagaaggagaatatgta	Protospacer
* * **.******************* .

65. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 7, identity: 0.767

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
aattaaaaaaataaagaaggagaatatgta	Protospacer
* * **.******************* .

66. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 7, identity: 0.767

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
aattaaaaaaataaagaaggagaatatgta	Protospacer
* * **.******************* .

67. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045289 (Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff2, complete sequence) position: , mismatch: 7, identity: 0.767

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
aggaaagaaaagaaagaaggagaaaaggga	Protospacer
*  ******** ************ **..

68. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 7, identity: 0.767

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
aattaaaaaaataaagaaggagaatatgta	Protospacer
* * **.******************* .

69. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MH487649 (Bacillus phage BC01, complete genome) position: , mismatch: 7, identity: 0.767

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
attaacgaaaataaagaagaagacgaggga	Protospacer
***** *************.***  **..

70. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 7, identity: 0.767

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
aataaagaaaataaagaagtagatttctct	Protospacer
* ***************** *** *    *

71. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011405 (Lactobacillus salivarius str. Ren plasmid pR2, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt	CRISPR spacer
aaactaatcatcctttttcttacctaattt	Protospacer
   .* ****** *****.***********

72. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014819 (Geminocystis sp. NIES-3708 plasmid pGM04, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt	CRISPR spacer
ctttttatcatcaatttttttactttgata	Protospacer
.************ *********.* . *

73. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032741 (Acinetobacter baumannii strain C25 plasmid unnamed1) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

74. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020580 (Acinetobacter baumannii strain SSMA17 plasmid pSSMA17_1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

75. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to CP007580 (Acinetobacter baumannii AC30 plasmid pAC30c, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

76. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020582 (Acinetobacter baumannii strain JBA13 plasmid pJBA13_1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

77. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to AP013484 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S36-C79) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttttttatcatcaatttttttcataacctt	Protospacer
************* *******  . * .**

78. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021787 (Acinetobacter baumannii strain A85 plasmid pA85-3, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

79. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG954379 (Acinetobacter baumannii strain SGH0905 plasmid pS32-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

80. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK531538 (Acinetobacter baumannii strain MC23 plasmid pMC23.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

81. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_025109 (Acinetobacter baumannii strain A85 plasmid pA85-3 clone GC1 AbaR4 resistance island, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

82. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017649 (Acinetobacter baumannii strain KAB04 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

83. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050915 (Acinetobacter baumannii strain DT-Ab007 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

84. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050909 (Acinetobacter baumannii strain DT-Ab022 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

85. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017651 (Acinetobacter baumannii strain KAB05 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

86. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to CP032137 (Acinetobacter haemolyticus strain sz1652 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

87. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_015418 (Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttttttatcttcatttgttttactttttaa	Protospacer
********* ****** ******.*  *

88. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019115 (Acinetobacter baumannii strain MDR-CQ plasmid pMDR-CQ, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

89. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to CP002524 (Acinetobacter baumannii TCDC-AB0715 plasmid p2ABTCDC0715, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

90. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017653 (Acinetobacter baumannii strain KAB06 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

91. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG954377 (Acinetobacter baumannii strain SGH9601 plasmid pS21-2, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

92. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038264 (Acinetobacter baumannii strain LEV1449/17Ec plasmid pEC_gr6, complete sequence) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt----	CRISPR spacer
attttaatcatcattttttt----tagtttgaaa	Protospacer
 **** **************    **.***

93. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to AP013483 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C20A-MedDCM-OCT-S30-C71) position: , mismatch: 7, identity: 0.767

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttttttatcatcaatttttttcataacctt	Protospacer
************* *******  . * .**

94. spacer 2.8|355005|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MH837543 (Lactobacillus phage LR2, complete genome) position: , mismatch: 7, identity: 0.767

gattcccttgctgaacctaataaataatcc	CRISPR spacer
gcaacacttgctgaacctaataaaaaagca	Protospacer
*   * ****************** ** *

95. spacer 2.9|355071|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 7, identity: 0.767

gaata-ataaaagtaccatctcaatttatgt	CRISPR spacer
-actatttaaaagtaccatttcaatttagtg	Protospacer
 * **  ************.********

96. spacer 2.10|355137|31|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to HQ634148 (Synechococcus phage S-CBS4, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces) position: , mismatch: 7, identity: 0.774

aaggaaaatgagttggcgcctttaaatgaat	CRISPR spacer
aaggaaagtgagttggcggctttgggcgaaa	Protospacer
*******.********** ****....***

97. spacer 2.10|355137|31|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to HQ698895 (Synechococcus phage S-CBS4, complete genome) position: , mismatch: 7, identity: 0.774

aaggaaaatgagttggcgcctttaaatgaat	CRISPR spacer
aaggaaagtgagttggcggctttgggcgaaa	Protospacer
*******.********** ****....***

98. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134421 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 12) position: , mismatch: 7, identity: 0.767

gatatttattgaagattgtttggataaact	CRISPR spacer
gttatttatggaagattttttggattcttt	Protospacer
* ******* ******* *******   .*

99. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT787017 (UNVERIFIED: Staphylococcus phage WV, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
caaagaattagaagaggttattgatagact	Protospacer
.*********.*************  *..

100. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN935200 (UNVERIFIED: Staphylococcus phage VTCCBPA116 genomic sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattagaagaggttattgatagact	Protospacer
 *********.*************  *..

101. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaattaaaagtgggtattgaagtttt	Protospacer
 ************* ** *******   *

102. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaatgggttattgagccttc	Protospacer
************* .*********..  *

103. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaatgggttattgagccttc	Protospacer
************* .*********..  *

104. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KX011028 (Staphylococcus phage pSco-10, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaactagaagaggttattgatagact	Protospacer
*******.**.*************  *..

105. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016596 (Bacillus cereus strain K8 plasmid pBCM301, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaatgggttattgagccttc	Protospacer
************* .*********..  *

106. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019364 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpB34, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagaatga	Protospacer
***************. *******. .  *

107. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaatgggttattgagccttc	Protospacer
************* .*********..  *

108. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015635 (Borrelia turicatae strain BTE5EL plasmid lp44) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagaatttattgagaatga	Protospacer
***************. *******. .  *

109. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF001355 (Proteus phage PM2, partial genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagatgttattttaagaag	Protospacer
*************** ******  * *. .

110. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KP890823 (Proteus phage vB_PmiM_Pm5461, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagatgttattttaagaag	Protospacer
*************** ******  * *. .

111. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_014172 (Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taccgaattaaaaaaggttattgaagaatt	Protospacer
**  *********.*********** ..*

112. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taccgaattaaaaaaggttattgaagaatt	Protospacer
**  *********.*********** ..*

113. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taccgaattaaaaaaggttattgaagaatt	Protospacer
**  *********.*********** ..*

114. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taccgaattaaaaaaggttattgaagaatt	Protospacer
**  *********.*********** ..*

115. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_017237 (Borreliella afzelii PKo plasmid lp38, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagagggttttggctataa	Protospacer
***************** * ***. *.  *

116. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taccgaattaaaaaaggttattgaagaatt	Protospacer
**  *********.*********** ..*

117. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taccgaattaaaaaaggttattgaagaatt	Protospacer
**  *********.*********** ..*

118. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

119. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MH107769 (Staphylococcus phage vB_SauM_0414_108, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgataggct	Protospacer
 ******.**.*************  **.

120. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

121. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

122. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

123. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

124. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KY794641 (Staphylococcus phage vB_Sau_CG, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgataggct	Protospacer
 ******.**.*************  **.

125. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

126. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to LR215719 (Staphylococcus phage Stab21 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgataggct	Protospacer
 ******.**.*************  **.

127. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

128. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN694372 (Marine virus AFVG_250M1157, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta-	CRISPR spacer
tacagaattaaaagaggtta-taagtaaaat	Protospacer
** ***************** *.*.*.. *

129. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

130. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_023573 (Staphylococcus phage phiSA012 DNA, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgataggct	Protospacer
 ******.**.*************  **.

131. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 7, identity: 0.767

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattaaaaaagattattgagtcttt	Protospacer
 ************.**.*******.*  *

132. spacer 2.2|354609|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF788071 (Raoultella ornithinolytica strain 23141 plasmid p23141-3, complete sequence) position: , mismatch: 8, identity: 0.733

aataat-taaaaggtttataaaaggcaagcg	CRISPR spacer
-ctggtgtaaaaggtttatagaaggcaaaaa	Protospacer
  *..* *************.*******. .

133. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 8, identity: 0.733

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
ttataagaaagtaaaaaaggagaatagcta	Protospacer
 *  ******.****.***********

134. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to CP016197 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-3, complete sequence) position: , mismatch: 8, identity: 0.733

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
gactgataaaataaagaaggaaaatcgaat	Protospacer
. . .* **************.*** ****

135. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032091 (Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ttttttatcatcattttttttacctaattt	CRISPR spacer
ttttttatcattatttttattacttttcag	Protospacer
***********.****** ****.*  .

136. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038263 (Acinetobacter baumannii strain LEV1449/17Ec plasmid pEC_gr13, complete sequence) position: , mismatch: 8, identity: 0.733

ttttttatcatcattttttttacctaattt	CRISPR spacer
tgcactattattattttttttacctaatgc	Protospacer
* . .***.**.**************** .

137. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028139 (Acinetobacter baumannii strain NCIMB 8209 plasmid pAbNCIMB8209_134, complete sequence) position: , mismatch: 8, identity: 0.733

ttttttatcatcattttttttacctaattt	CRISPR spacer
tgcactattattattttttttacctaatgc	Protospacer
* . .***.**.**************** .

138. spacer 2.5|354807|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030362 (Salinibacter ruber strain SP73 plasmid pSR16, complete sequence) position: , mismatch: 8, identity: 0.733

accgtaaagggagaatcaccgtcagtattg	CRISPR spacer
accggaaacggagaatcaccgtcacgccca	Protospacer
**** *** ***************   ...

139. spacer 2.13|355336|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK496805 (Capybara microvirus Cap3_SP_478, complete genome) position: , mismatch: 8, identity: 0.733

tttttaaagcttcataactttcctgattat	CRISPR spacer
atgcagaagcttcataagtttcctgataag	Protospacer
 * . .*********** ********* *

140. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
caaagaattaaaatgggttattgagccttc	Protospacer
.************ .*********..  *

141. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020540 (Sphingobium herbicidovorans strain MH plasmid pSHV1, complete sequence) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
agaagaattaaaagaggtcattggatttgt	Protospacer
 .****************.****.**

142. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
caaagaattaaaatgggttattgagccttc	Protospacer
.************ .*********..  *

143. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
caaagaattaaaatgggttattgagccttc	Protospacer
.************ .*********..  *

144. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050184 (Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
caaagaattaaaatgggttattgagccttc	Protospacer
.************ .*********..  *

145. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK584893 (Staphylococcus phage vBSM-A1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

146. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN539738 (UNVERIFIED: Staphylococcus phage vB_SauM-D, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

147. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT080600 (UNVERIFIED: Staphylococcus phage vB_SauM_EW71, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

148. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_019726 (Staphylococcus phage JD007, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

149. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_047721 (Staphylococcus phage SA5, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

150. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KR908644 (Staphylococcus phage IME-SA119, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

151. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagatgttatcttaagacg	Protospacer
*************** *****.  * *...

152. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MH136584 (Staphylococcus phage HYZ21, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

153. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
caaagaattaaaatgggttattgagccttc	Protospacer
.************ .*********..  *

154. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
caaagaattaaaatgggttattgagccttc	Protospacer
.************ .*********..  *

155. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
caaagaattaaaatgggttattgagccttc	Protospacer
.************ .*********..  *

156. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
ataagaattaaaagaagttatggaagatga	Protospacer
  *************.***** *** .  *

157. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN539736 (UNVERIFIED: Staphylococcus phage vB_SauM-A, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

158. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KY581279 (Staphylococcus phage pSa-3, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

159. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT411892 (Staphylococcus phage Metroid, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

160. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KJ206562 (Staphylococcus phage 812 isolate host-range mutant 812F1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

161. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to AP018375 (Staphylococcus phage phiSA039 DNA, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

162. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK417514 (Staphylococcus virus Sa83, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

163. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN336263 (Staphylococcus phage Sb1M_9832, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

164. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
agaagaattaaaagagttaattgaactttt	Protospacer
 .************** * ******.  *

165. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN336262 (Staphylococcus phage Sb1M_6168, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

166. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
taaagaattaaaagatgttatcttaagacg	Protospacer
*************** *****.  * *...

167. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to AY954969 (Bacteriophage G1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

168. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK331931 (Staphylococcus phage Sa30, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

169. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KJ206563 (Staphylococcus phage 812 isolate host-range mutant K1/420, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

170. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to JX080302 (Staphylococcus phage 676Z, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

171. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN045228 (Staphylococcus phage Maine, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

172. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN047438 (Staphylococcus phage vB_SauM-515A1) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

173. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF405094 (Staphylococcus phage JA1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

174. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN336261 (Staphylococcus phage Sb1_8383, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

175. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN539737 (UNVERIFIED: Staphylococcus phage vB_SauM-C, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

176. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to EU418428 (Staphylococcus phage A5W, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

177. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KP687431 (Staphylococcus phage IME-SA1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

178. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK417516 (Staphylococcus virus J-Sa36, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

179. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT080602 (UNVERIFIED: Staphylococcus phage vB_SauM_EW74, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

180. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
cgaagaattaaaagagttaattgaactttt	Protospacer
..************** * ******.  *

181. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KJ206561 (Staphylococcus phage 812 isolate host-range mutant K1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

182. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KP687432 (Staphylococcus phage IME-SA2, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

183. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_047722 (Staphylococcus phage Staph1N, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

184. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
agaagaattaaaagagttaattgaactttt	Protospacer
 .************** * ******.  *

185. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KY794643 (Staphylococcus phage vB_Sau_S24, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattagaagaggttattaatagact	Protospacer
 *********.***********.*  *..

186. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_047723 (Staphylococcus phage A3R, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

187. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_047720 (Staphylococcus phage ISP complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

188. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to JX080303 (Staphylococcus phage Fi200W, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

189. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MG656408 (Staphylococcus phage B1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

190. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KF766114 (Staphylococcus phage K, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

191. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KR902361 (Staphylococcus phage IME-SA118, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

192. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MH844529 (Staphylococcus phage 812h1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

193. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KC012913 (Staphylococcus phage Team1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

194. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK331930 (Staphylococcus phage CH1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

195. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to LR215720 (Staphylococcus phage Stab23 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaattagaaggggttattgatagact	Protospacer
 *********.***.*********  *..

196. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to JX080305 (Staphylococcus phage P4W, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

197. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to KJ206560 (Staphylococcus phage 812 isolate host-range mutant 812a, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

198. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MF398190 (Staphylococcus phage vB_SauM-fRuSau02, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

199. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to EF136589 (Staphylococcus phage 812 strain phi812 putative exonuclease, hypothetical protein, putative nuclease, hypothetical protein, putative primase, hypothetical proteins, putative ribonucleotide reduction-related protein, putative ribonucleotide reductase large subunit, putative ribonucleotide reductase minor subunit, hypothetical protein, putative oxidoreductase, hypothetical protein, and putative integration host factor genes, complete cds; and hypothetical protein gene, partial cds) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

200. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
agaagaattaaaagagttaattgaactttt	Protospacer
 .************** * ******.  *

201. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK417515 (Staphylococcus virus Sa87, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

202. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MH844528 (Staphylococcus phage 812, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

203. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_007066 (Staphylococcus phage G1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

204. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
agaagaattaaaagagttaattgaactttt	Protospacer
 .************** * ******.  *

205. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to JX080304 (Staphylococcus phage MSA6, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

206. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_023009 (Staphylococcus phage Sb-1, complete genome) position: , mismatch: 8, identity: 0.733

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaactagaagaggttattgatagact	Protospacer
 ******.**.*************  *..

207. spacer 2.15|355468|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041065 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_2, complete sequence) position: , mismatch: 8, identity: 0.733

----aaatgtcttacaatttgcttttgctgagcc	CRISPR spacer
cttagaa----ttacaatttgcttttgctaagta	Protospacer
    .**    ******************.**.

208. spacer 2.15|355468|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018875 (Bacillus megaterium strain JX285 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

----aaatgtcttacaatttgcttttgctgagcc	CRISPR spacer
cttagaa----ttacaatttgcttttgctaagta	Protospacer
    .**    ******************.**.

209. spacer 2.16|355534|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018322 (Alteromonas macleodii strain Te101 plasmid pTE101a, complete sequence) position: , mismatch: 8, identity: 0.733

ataatacatcggtgtagtcgaaatagtagt	CRISPR spacer
gaaatacatcggtgtaatcgaaaaaatcac	Protospacer
. **************.****** *.* ..

210. spacer 2.17|355600|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT774388 (CrAssphage cr112_1, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaaattaggtagttacgaacaagacgt	CRISPR spacer
aaaaaaattaggtatttacaaaccacttcc	Protospacer
************** ****.*** *  . .

211. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_020237 (Staphylococcus hyicus plasmid pSTE1 complete sequence) position: , mismatch: 9, identity: 0.7

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
cagaaagaaagttaagaaggagaataatgc	Protospacer
   *******.* *************. ..

212. spacer 2.3|354675|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014695 (Staphylococcus aureus subsp. aureus strain LA-MRSA ST398 plasmid paadD, complete sequence) position: , mismatch: 9, identity: 0.7

attaaagaaaataaagaaggagaatagaat	CRISPR spacer
cagaaagaaagttaagaaggagaataatgc	Protospacer
   *******.* *************. ..

213. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.7

ttttttatcatcattttttttacctaattt	CRISPR spacer
agaagtatcatcaatttttttatctaatac	Protospacer
     ******** ********.***** .

214. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.7

ttttttatcatcattttttttacctaattt	CRISPR spacer
agaagtatcatcaatttttttatctaatgc	Protospacer
     ******** ********.***** .

215. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.7

ttttttatcatcattttttttacctaattt	CRISPR spacer
agaagtatcatcaatttttttatctaatgc	Protospacer
     ******** ********.***** .

216. spacer 2.4|354741|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020439 (Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence) position: , mismatch: 9, identity: 0.7

ttttttatcatcattttttttacctaattt	CRISPR spacer
gcttttatcatcatttttcttaccagtcaa	Protospacer
 .****************.***** . .

217. spacer 2.7|354939|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 9, identity: 0.7

tatttaaataattcccattaatatagtcat	CRISPR spacer
aatttaaataattgccattaatcggaggtt	Protospacer
 ************ ********  ..   *

218. spacer 2.7|354939|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 9, identity: 0.7

tatttaaataattcccattaatatagtcat	CRISPR spacer
aatttaaataattgccattaatcggaggtt	Protospacer
 ************ ********  ..   *

219. spacer 2.9|355071|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT774393 (CrAssphage cr127_1, complete genome) position: , mismatch: 9, identity: 0.7

gaataataaaagtaccatctcaatttatgt	CRISPR spacer
atgtaataaaagtatcatcttaattttaaa	Protospacer
. .***********.*****.*****  .

220. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026684 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM2, complete sequence) position: , mismatch: 9, identity: 0.7

gatatttattgaagattgtttggataaact	CRISPR spacer
tgaagagattgaagattttttggataaata	Protospacer
 . *   ********** **********.

221. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 9, identity: 0.7

gatatttattgaagattgtttggataaact	CRISPR spacer
gatatttattgaagatttttttagcatctg	Protospacer
***************** *** ...*  .

222. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 9, identity: 0.7

gatatttattgaagattgtttggataaact	CRISPR spacer
gatatttattgaagatttttttagcatctg	Protospacer
***************** *** ...*  .

223. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 9, identity: 0.7

gatatttattgaagattgtttggataaact	CRISPR spacer
gatatttattgaagatttttttagcatctg	Protospacer
***************** *** ...*  .

224. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 9, identity: 0.7

gatatttattgaagattgtttggataaact	CRISPR spacer
gatatttattgaagatttttttagcatctg	Protospacer
***************** *** ...*  .

225. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 9, identity: 0.7

gatatttattgaagattgtttggataaact	CRISPR spacer
gatatttattgaagatttttttagcatctg	Protospacer
***************** *** ...*  .

226. spacer 2.12|355270|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 9, identity: 0.7

gatatttattgaagattgtttggataaact	CRISPR spacer
gatatttattgaagatttttttagcatctg	Protospacer
***************** *** ...*  .

227. spacer 2.13|355336|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN694154 (Marine virus AFVG_250M77, complete genome) position: , mismatch: 9, identity: 0.7

tttttaaagcttcataactttcctgattat	CRISPR spacer
cacccccaggtttataactttcctgattat	Protospacer
. ...  ** **.*****************

228. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049297 (Bacillus megaterium strain S188 plasmid pS188, complete sequence) position: , mismatch: 9, identity: 0.7

taaagaattaaaagaggttattgaatggta	CRISPR spacer
gaaagaatttaaagaagttattgaggaacg	Protospacer
 ******** *****.********. ....

229. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MW057858 (Providencia phage PSTCR6, complete genome) position: , mismatch: 9, identity: 0.7

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaattaaaagacgttattcttagaag	Protospacer
 ************** ******    *. .

230. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to MN013084 (Klebsiella phage vB_KaeM_KaAlpha, complete genome) position: , mismatch: 9, identity: 0.7

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaattaaaagatgttattttgcgtcg	Protospacer
 ************** ******  ..* ..

231. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to LT614807 (Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I) position: , mismatch: 9, identity: 0.7

taaagaattaaaagaggttattgaatggta	CRISPR spacer
aaaagaattaaaagatgttattttgcgtcg	Protospacer
 ************** ******  ..* ..

232. spacer 2.14|355402|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047395 (Bacillus vietnamensis strain 151-6 plasmid p6, complete sequence) position: , mismatch: 10, identity: 0.667

taaagaattaaaagaggttattgaatggta	CRISPR spacer
agttgaattaaaaaaggttattgaaactct	Protospacer
 .  *********.***********   .

233. spacer 2.16|355534|30|LR215044|PILER-CR,CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 10, identity: 0.667

ataatacatcggtgtagtcgaaatagtagt	CRISPR spacer
ctaatacatcggtgtagccgaatggccgaa	Protospacer
 ****************.****  . ...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

629340 : 637342

Mycoplasma_phage(83.33%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEU81919.1\|629340_630684_-\|tRNA	lysyl-tRNA synthetase	L7RCX2	Acanthamoeba_polyphaga_moumouvirus	1.9e-73	37.0
VEU81920.1\|630822_632589_-	Uncharacterised protein	Q6GZ00	Mycoplasma_phage	7.5e-49	34.8
VEU81921.1\|632590_633454_-	spermidine/putrescine ABC transporter membrane protein	Q6GZ01	Mycoplasma_phage	6.4e-70	49.6
VEU81922.1\|633446_634310_-	polyamine (spermidine/putrescine) ABC transporter permease	Q6GZ02	Mycoplasma_phage	2.4e-61	48.8
VEU81923.1\|634299_635682_-	sugar ABC transporter, ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.2e-59	57.9
VEU81924.1\|635698_637342_-	Uncharacterised protein	Q6GZ00	Mycoplasma_phage	3.6e-37	26.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage