CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	0 crisprs	RT	0	0	3	0
NC_004337	Shigella flexneri 2a str. 301 chromosome, complete genome	5 crisprs	DinG,cas3,DEDDh,csa3,RT	1	3	29	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

190 : 6925

Stx2-converting_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_858134.1\|190_493_-	IS2 ORF2	Q9ZXG3	Shigella_phage	2.3e-35	88.2
NP_858135.1\|484_949_+	resolvase	NA	NA	NA	NA
NP_858136.1\|1175_2042_+	OspB protein	A0A0P0ZCT1	Stx2-converting_phage	9.4e-29	32.7
NP_858137.1\|2370_3111_+	PhoN2 (Apy), periplasmic phosphatase, apyrase, ATP diphosphohydrolase	A0A1B1IUP6	uncultured_Mediterranean_phage	7.5e-11	28.4
NP_858138.1\|3470_4745_-	OspC4	NA	NA	NA	NA
NP_858139.2\|5263_5665_-	hypothetical protein	A0A0P0ZBS5	Stx2-converting_phage	4.9e-33	58.2
NP_858140.1\|5744_6095_-	IS600 ORF2	A0A0P0I4A4	Acinetobacter_phage	2.8e-08	37.0
NP_858141.1\|6106_6925_-	IS600 ORF2	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9

DBSCAN-SWA_2

18103 : 100231

Escherichia_phage(26.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_858154.1\|18103_18310_+\|transposase	transposase	NA	NA	NA	NA
NP_858155.1\|18897_19575_+	protein OspD1	NA	NA	NA	NA
NP_858156.1\|20086_20401_+	hypothetical protein	NA	NA	NA	NA
NP_858157.2\|20682_21249_+	hypothetical protein	NA	NA	NA	NA
NP_858158.1\|21745_22330_+	IS3 ORF2	U5P429	Shigella_phage	2.5e-46	51.2
NP_858159.1\|23116_23899_+	IS100 ORF1	A0A2L1IVA1	Escherichia_phage	3.6e-128	96.1
NP_858161.2\|23819_25043_-	ISSfl3 ORF	S5FM71	Shigella_phage	1.8e-126	58.7
NP_858160.2\|25017_25449_+	IS100 ORF1	A0A2L1IVA1	Escherichia_phage	5.1e-60	93.2
NP_858162.1\|25445_26228_+\|transposase	transposase/IS protein	A0A2L1IVB6	Escherichia_phage	8.5e-138	98.8
NP_858163.1\|26243_26633_+	iso-IS1 ORF2	A0A0U2RK18	Escherichia_phage	9.0e-56	85.2
NP_858164.1\|26954_28154_+	plasmid segregation protein	Q71TL9	Escherichia_phage	2.0e-175	75.1
NP_858165.1\|28153_29134_+	plasmid segregation protein	Q38420	Escherichia_phage	5.0e-95	58.2
NP_858167.2\|29338_29521_-	hypothetical protein	NA	NA	NA	NA
NP_858166.2\|29515_29875_+\|transposase	transposase	NA	NA	NA	NA
NP_858170.1\|31155_31551_+	hypothetical protein	NA	NA	NA	NA
NP_858171.1\|31391_31811_+	hypothetical protein	NA	NA	NA	NA
NP_858172.1\|32083_32752_-	IS629 ORF2	Q6H9S3	Enterobacteria_phage	1.4e-120	98.6
NP_858173.1\|32966_33293_-	IS629 ORF1	Q6H9S4	Enterobacteria_phage	2.3e-52	94.4
NP_858174.1\|33298_33706_-	IS150 ORF B	A0A2I6AZV9	Macacine_betaherpesvirus	2.6e-45	96.9
NP_858175.1\|33761_33950_+\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_858176.1\|33959_35159_+\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_858177.1\|35564_36086_-	IS150 ORF1(ORF A)	A0A2I6AZV8	Macacine_betaherpesvirus	6.1e-92	99.4
NP_858178.1\|36123_36507_+	IS100 ORF2	A0A2L1IVB6	Escherichia_phage	9.1e-53	98.1
NP_858179.2\|36448_37237_-	transcriptional activator VirF	NA	NA	NA	NA
NP_858180.1\|37779_38067_+	IS2 ORF2	Q9ZXG3	Shigella_phage	1.7e-27	69.9
YP_001449236.1\|38248_38515_+	OspE2	NA	NA	NA	NA
NP_858183.2\|38611_38824_-	IS1 encoded protein	NA	NA	NA	NA
NP_858182.2\|38752_38980_+	IS1 ORF1	Q71TE9	Escherichia_phage	3.9e-35	92.0
NP_858184.1\|39006_39402_+	IS1 ORF2	Q71TF0	Escherichia_phage	6.3e-65	91.6
NP_858187.1\|41196_42888_+	invasion plasmid antigen	NA	NA	NA	NA
NP_858188.1\|42939_43266_+	IS629 ORF1	Q6H9S4	Enterobacteria_phage	1.6e-53	96.3
NP_858189.1\|43480_44149_+	IS629 ORF2	Q6H9S3	Enterobacteria_phage	8.3e-118	96.8
NP_858190.1\|44188_44377_-	IS600 ORF2	NA	NA	NA	NA
NP_858191.1\|44412_44715_-	IS600 ORF1	Q716C1	Shigella_phage	5.0e-06	31.3
NP_858192.1\|44782_45265_-	hypothetical protein	NA	NA	NA	NA
NP_858193.2\|45255_45558_-	hypothetical protein	NA	NA	NA	NA
YP_145811.1\|45829_46102_+	hypothetical protein	NA	NA	NA	NA
NP_858194.1\|46082_47291_+\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_858195.1\|47360_47591_+	ISSfl1 ORF2	NA	NA	NA	NA
NP_858196.1\|47739_49194_-	hypothetical protein	NA	NA	NA	NA
NP_858197.1\|49510_49708_-	IS1 encoded protein	NA	NA	NA	NA
NP_858198.1\|49782_50241_+	IS1 ORF2	U5P0U6	Shigella_phage	3.2e-68	89.9
NP_858199.1\|50266_50593_+	IS629 ORF1	Q6H9S4	Enterobacteria_phage	2.3e-52	94.4
NP_858200.1\|50807_51476_+	IS629 ORF2	Q6H9S3	Enterobacteria_phage	5.2e-120	98.2
NP_858201.1\|51441_51930_+	hypothetical protein	A0A0P0ZEB3	Stx2-converting_phage	1.9e-47	65.4
NP_858202.1\|51949_52576_+	IS21 ORF2	U5N3V8	Enterobacteria_phage	9.4e-31	37.4
NP_858203.1\|52744_56839_-\|protease	extracellular serine protease SepA	Q9LA58	Enterobacterial_phage	7.3e-281	42.3
NP_858204.1\|57240_57429_+\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_858205.1\|57438_58638_+\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_858206.1\|58934_59264_+	ISSfl1 ORF1	A0A0N9SHJ4	Paenibacillus_phage	1.4e-12	51.3
NP_858207.1\|59269_59659_+	ISSfl1 ORF2	A0A1V0SLQ8	Klosneuvirus	7.7e-07	37.8
NP_858208.1\|59773_60805_+	IS630 orf	NA	NA	NA	NA
NP_858209.1\|60986_61271_+	iso-IS1 ORF1	A0A0U2RK18	Escherichia_phage	2.6e-28	69.3
NP_858210.1\|61396_61579_+	iso-IS1 ORF2	A0A0U2RK18	Escherichia_phage	2.0e-21	82.1
NP_858211.1\|62213_63911_+	invasion plasmid antigen	NA	NA	NA	NA
NP_858212.1\|64338_66063_+	invasion plasmid antigen	NA	NA	NA	NA
NP_858213.1\|66114_66441_+	IS629 ORF1	Q6H9S4	Enterobacteria_phage	5.6e-51	92.6
NP_858214.1\|66655_67369_+	IS629 ORF2	Q6H9S3	Enterobacteria_phage	1.0e-113	99.0
NP_858215.1\|68287_69691_+	invasion plasmid gene product	NA	NA	NA	NA
NP_858216.1\|69659_69950_+	hypothetical protein	NA	NA	NA	NA
NP_858217.1\|70194_71403_+	iso-IS10R ORF	A0A0F7LAS3	uncultured_marine_virus	8.8e-235	99.8
NP_858218.1\|71381_71573_-	IS100 ORF2	A0A2L1IVB6	Escherichia_phage	6.6e-20	96.2
NP_858219.1\|71613_72117_-	hypothetical protein	A0A0P0ZEB3	Stx2-converting_phage	6.6e-59	65.9
NP_858220.1\|72089_72881_-	IS629 ORF2	Q6H9S3	Enterobacteria_phage	3.9e-114	99.5
NP_858221.1\|73095_73422_-	IS629 ORF1	Q6H9S4	Enterobacteria_phage	1.3e-52	95.4
NP_858222.1\|73673_74336_+\|transposase	transposase/IS protein	A0A2L1IVB6	Escherichia_phage	1.8e-117	99.1
NP_858223.1\|74708_75071_+\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_858297.1\|74711_74978_-\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_858224.1\|75049_76258_-	iso-IS10R ORF	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
NP_858225.1\|76327_77257_-\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_858226.1\|77912_79610_-	hypothetical protein	NA	NA	NA	NA
NP_858227.1\|79938_81351_-	protein OspC1	NA	NA	NA	NA
NP_858228.1\|81805_82105_-	ISSfl4 ORF3	NA	NA	NA	NA
NP_858230.2\|82114_82504_-	hypothetical protein	NA	NA	NA	NA
NP_858229.2\|82465_82654_+	IS91 ORF2	NA	NA	NA	NA
NP_858231.1\|82690_83080_-	ISSfl1 ORF2	A0A1V0SLQ8	Klosneuvirus	7.7e-07	37.8
NP_858232.1\|83085_83625_-	ISSfl1 ORF1	A0A0N9SHJ4	Paenibacillus_phage	1.9e-19	47.7
NP_858233.1\|83644_84118_-	hypothetical protein	NA	NA	NA	NA
NP_858234.1\|84368_85565_+	ISSfl2 ORF	NA	NA	NA	NA
NP_858235.1\|85559_85979_-	hypothetical protein	NA	NA	NA	NA
NP_858238.1\|87009_87915_-\|transposase	insertion element IS2 transposase InsD	Q9ZXG3	Shigella_phage	3.7e-177	99.0
NP_858239.1\|87872_88283_-	insertion sequence 2 OrfA protein	Q76S41	Shigella_phage	4.1e-59	99.2
NP_858240.1\|88352_89171_-	IS600 ORF2	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9
NP_858241.1\|89206_89509_-	IS600 ORF1	Q716C1	Shigella_phage	1.1e-05	31.3
NP_858242.1\|90029_90515_-	hypothetical protein	NA	NA	NA	NA
NP_858243.2\|90502_90787_-	hypothetical protein	NA	NA	NA	NA
NP_858244.1\|91688_91853_+	hypothetical protein	NA	NA	NA	NA
NP_858245.1\|92106_93708_-	ISSfl4 ORF3	A0A0P0ZBS5	Stx2-converting_phage	4.6e-146	61.3
NP_858246.1\|93704_94055_-	ISSfl4 ORF2	A0A0P0ZDM8	Stx2-converting_phage	1.8e-26	67.5
NP_858247.1\|94051_94726_-	ISSfl4 ORF1	A0A0P0ZCV4	Stx2-converting_phage	4.9e-09	29.3
NP_858248.1\|95294_96749_+	OspC3	NA	NA	NA	NA
NP_858249.1\|97086_97389_+	IS600 ORF1	Q716C1	Shigella_phage	5.0e-06	31.3
NP_858250.1\|97416_98151_+	IS600 ORF2	A0A0P0I4A4	Acinetobacter_phage	3.3e-59	47.3
NP_858251.1\|98572_98995_+	IS150 ORF B	A0A2I6AZV9	Macacine_betaherpesvirus	1.3e-23	44.1
NP_858252.2\|99454_100231_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

164526 : 178801

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_858331.2\|164526_165210_+	methylase	A0A2I7RE86	Vibrio_phage	2.3e-30	36.9
NP_858332.1\|165210_165432_+	hypothetical protein	NA	NA	NA	NA
NP_858333.2\|165428_165629_+	hypothetical protein	NA	NA	NA	NA
NP_858334.1\|165662_165878_+	hypothetical protein	NA	NA	NA	NA
NP_858335.1\|165922_166693_+	hypothetical protein	NA	NA	NA	NA
NP_858336.1\|167031_167685_-\|transposase	transposase	NA	NA	NA	NA
NP_858337.1\|167759_169361_-	ISSfl4 ORF3	A0A0P0ZEB3	Stx2-converting_phage	3.2e-147	61.2
NP_858338.1\|169357_169708_-	ISSfl4 ORF2	A0A0P0ZDM8	Stx2-converting_phage	1.8e-26	67.5
NP_858339.1\|169704_170379_-	ISSfl4 ORF1	A0A0P0ZCV4	Stx2-converting_phage	4.9e-09	29.3
NP_858340.1\|170326_171064_-	IS2 ORF2	Q9ZXG3	Shigella_phage	1.8e-113	97.0
NP_858341.2\|171134_171500_-	insertion sequence 2 OrfA protein	Q76S41	Shigella_phage	9.6e-60	100.0
NP_858342.1\|171971_172610_-	hypothetical protein	NA	NA	NA	NA
NP_858343.1\|172966_173239_-	iso-IS1 ORF1	A0A0U2RK18	Escherichia_phage	5.9e-30	71.6
NP_858344.1\|173437_174112_+	ISSfl4 ORF1	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
NP_858345.1\|174108_174456_+	ISSfl4 ORF2	A0A0P0ZDM8	Stx2-converting_phage	9.2e-44	73.8
NP_858346.1\|174475_176077_+	ISSfl4 ORF3	A0A0P0ZBS5	Stx2-converting_phage	2.2e-148	61.8
NP_858347.1\|176265_176499_+	IS100 ORF2	A0A2L1IVB6	Escherichia_phage	6.2e-28	83.1
NP_858348.1\|176550_176841_-	hypothetical protein	NA	NA	NA	NA
NP_858349.1\|176809_177061_-	hypothetical protein	NA	NA	NA	NA
NP_858350.1\|177512_177797_+	hypothetical protein	NA	NA	NA	NA
NP_858351.1\|177796_178072_+	hypothetical protein	NA	NA	NA	NA
NP_858352.1\|178124_178304_+	hypothetical protein	NA	NA	NA	NA
NP_858353.1\|178297_178801_-	IS1 ORF2	U5P0U6	Shigella_phage	2.2e-83	92.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_004337

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_004337_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_004337_1

64543-64658

Orphan

Consensus_repeat	Method
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_004337_1

>merge|NC_004337|1|64543-64658|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTT

>NC_004337|1|1|64543-64658|CRISPRCasFinder
GATAAGACGCGCCAGCGTCGCATCAGGCGTT	GAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCA
GATAAGACGCGTCAGCGTCGCATCAGGCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_004337.2\|NP_706011.2\|56681_57497_+\|Dna-J-like-membrane-chaperone-protein	unknown	unknown	gnl\|CDD\|236512
NC_004337.2\|NP_706019.2\|70070_70769_-\|thiamine-ABC-transporter-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|182716
NC_004337.2\|NP_706014.1\|61356_63708_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NC_004337.2\|NP_706025.1\|77305_78706_-\|isopropylmalate-isomerase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NC_004337.2\|NP_706018.1\|69192_69957_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223659
NC_004337.2\|NP_706017.2\|68228_69107_+\|DNA-binding-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NC_004337.2\|NP_706024.1\|76689_77295_-\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NC_004337.2\|NP_706009.1\|52733_54020_-\|peptidyl-prolyl-cis-trans-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NC_004337.2\|NP_706020.1\|70752_72363_-\|thiamine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181853
NC_004337.2\|NP_706008.1\|51744_52734_-\|4-hydroxythreonine-4-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234696
NC_004337.2\|NP_706013.1\|58285_61192_-\|ATP-dependent-helicase-HepA	unknown	unknown	gnl\|CDD\|235319
NC_004337.2\|NP_706023.1\|75462_76641_+\|transporter	unknown	unknown	gnl\|CDD\|129977
NC_004337.2\|NP_706021.2\|72338_73322_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NC_004337.2\|NP_706012.1\|57644_58331_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236659
NC_004337.2\|NP_706022.2\|73485_75141_-\|transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NC_004337.2\|NP_706006.1\|50546_50924_-\|CO2+/MG2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NC_004337.2\|NP_706007.1\|50926_51748_-\|16S-ribosomal-RNA-methyltransferase-KsgA/Dim1-family-protein	unknown	unknown	gnl\|CDD\|234708
NC_004337.2\|NP_706010.1\|54072_56427_-\|LPS-assembly-outer-membrane-complex-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NC_004337.2\|NP_706016.1\|66189_67890_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NC_004337.2\|NP_706015.1\|63782_64478_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181

Protein	Function_ID	Function_description	E-value
NC_004337.2\|NP_706011.2\|56681_57497_+\|Dna-J-like-membrane-chaperone-protein	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.09407e-169
NC_004337.2\|NP_706019.2\|70070_70769_-\|thiamine-ABC-transporter-ATP-binding-subunit	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	7.99609e-163
NC_004337.2\|NP_706014.1\|61356_63708_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NC_004337.2\|NP_706025.1\|77305_78706_-\|isopropylmalate-isomerase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NC_004337.2\|NP_706018.1\|69192_69957_+\|hypothetical-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.87417e-49
NC_004337.2\|NP_706017.2\|68228_69107_+\|DNA-binding-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NC_004337.2\|NP_706024.1\|76689_77295_-\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	2.8073e-142
NC_004337.2\|NP_706009.1\|52733_54020_-\|peptidyl-prolyl-cis-trans-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NC_004337.2\|NP_706020.1\|70752_72363_-\|thiamine-ABC-transporter-permease	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
NC_004337.2\|NP_706008.1\|51744_52734_-\|4-hydroxythreonine-4-phosphate-dehydrogenase	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NC_004337.2\|NP_706013.1\|58285_61192_-\|ATP-dependent-helicase-HepA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NC_004337.2\|NP_706023.1\|75462_76641_+\|transporter	gnl\|CDD\|129977	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	9.70218e-179
NC_004337.2\|NP_706021.2\|72338_73322_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NC_004337.2\|NP_706012.1\|57644_58331_-\|hypothetical-protein	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	4.36789e-139
NC_004337.2\|NP_706022.2\|73485_75141_-\|transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
NC_004337.2\|NP_706006.1\|50546_50924_-\|CO2+/MG2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
NC_004337.2\|NP_706007.1\|50926_51748_-\|16S-ribosomal-RNA-methyltransferase-KsgA/Dim1-family-protein	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.53757e-148
NC_004337.2\|NP_706010.1\|54072_56427_-\|LPS-assembly-outer-membrane-complex-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NC_004337.2\|NP_706016.1\|66189_67890_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NC_004337.2\|NP_706015.1\|63782_64478_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	2.636e-179

>NC_004337.2|NP_706015.1|63782_64478_-|L-ribulose-5-phosphate-4-epimerase
MLKDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ
>NC_004337.2|NP_706014.1|61356_63708_-|DNA-polymerase-II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIHADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDKAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDIIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRQTIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF
>NC_004337.2|NP_706013.1|58285_61192_-|ATP-dependent-helicase-HepA
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ
>NC_004337.2|NP_706012.1|57644_58331_-|hypothetical-protein
MASGCPAFDRCNASVTEPKMGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARADGTAFVATCRDVDDYPSGVWQ
>NC_004337.2|NP_706011.2|56681_57497_+|Dna-J-like-membrane-chaperone-protein
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
>NC_004337.2|NP_706010.1|54072_56427_-|LPS-assembly-outer-membrane-complex-protein-LptD
MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKFLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYHYASPEYIQATLPKYYSTAEQYKNGISQVGAVASRPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL
>NC_004337.2|NP_706009.1|52733_54020_-|peptidyl-prolyl-cis-trans-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN
>NC_004337.2|NP_706008.1|51744_52734_-|4-hydroxythreonine-4-phosphate-dehydrogenase
MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRPYSPNSPAQPQTTGTLTLLPVALRESVTAGQLAIENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDASIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLDELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ
>NC_004337.2|NP_706007.1|50926_51748_-|16S-ribosomal-RNA-methyltransferase-KsgA/Dim1-family-protein
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES
>NC_004337.2|NP_706006.1|50546_50924_-|CO2+/MG2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
>NC_004337.2|NP_706016.1|66189_67890_-|ribulokinase
MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDTPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL
>NC_004337.2|NP_706017.2|68228_69107_+|DNA-binding-transcriptional-regulator-AraC
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGCHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPYFSDLFGQIINAGQGEGRYSELLAMNLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>NC_004337.2|NP_706018.1|69192_69957_+|hypothetical-protein
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
>NC_004337.2|NP_706019.2|70070_70769_-|thiamine-ABC-transporter-ATP-binding-subunit
MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEEVLSGKGSASAIWGIQG
>NC_004337.2|NP_706020.1|70752_72363_-|thiamine-ABC-transporter-permease
MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
>NC_004337.2|NP_706021.2|72338_73322_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEANCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR
>NC_004337.2|NP_706022.2|73485_75141_-|transcriptional-regulator-SgrR
MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHITDIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPCEWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEKKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP
>NC_004337.2|NP_706023.1|75462_76641_+|transporter
MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLLSVARVELPSENALSMQGDWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSDLGLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVVAGVLFYTGLIFFHSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNTISTGVILAGVIQGAIAQSWGHFAVYWVIAIISVVALFLTAKVKDV
>NC_004337.2|NP_706024.1|76689_77295_-|3-isopropylmalate-dehydratase-small-subunit
MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIASYEAKQPAFMN
>NC_004337.2|NP_706025.1|77305_78706_-|isopropylmalate-isomerase-large-subunit
MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGLRAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNHPYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAALVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTVVTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPLTEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRNIK

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Crispr_ID: NC_004337_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_004337_2

877065-877213

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGTACAGGCAGCTTAGAAAT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_004337_2

>merge|NC_004337|2|877065-877213|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAATCGACGGGGTGCGGTAAAACCTTTGCGAACGCGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGC

>NC_004337|2|2|877065-877213|CRISPRCasFinder
GTTCACTGCCGTACAGGCAGCTTAGAAAT	CGACGGGGTGCGGTAAAACCTTTGCGAACGC
GTTCACTGCCGTACAGGCAGCTTAGAAAT	TCACAGGTAACATACTCCACCCGCCCACCAT
GTTCACTGCCGTACAGACAGATAAAATGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_004337.2\|NP_706775.1\|884594_888623_+\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NC_004337.2\|NP_706765.1\|871659_873606_+\|macrolide-transporter-ATP-binding-/permease	unknown	unknown	gnl\|CDD\|182528
NC_004337.2\|NP_706773.2\|882456_883422_-\|thioredoxin-reductase	unknown	unknown	gnl\|CDD\|182343
NC_004337.2\|NP_706774.2\|883965_884460_+\|leucine-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183009
NC_004337.2\|NP_706763.1\|870501_870636_+\|hypothetical-protein	unknown	unknown	unknown
NC_004337.2\|NP_706777.1\|889399_890743_+\|recombination-factor-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NC_004337.2\|NP_706759.2\|866636_867140_-\|insertion-element-IS1-protein-InsB	unknown	unknown	gnl\|CDD\|281403
NC_004337.2\|NP_706772.1\|880567_882334_-\|cysteine/glutathione-ABC-transporter-membrane/ATP-binding-protein	unknown	unknown	gnl\|CDD\|236870
NC_004337.2\|NP_706766.1\|873678_873903_-\|stationary-phase/starvation-inducible-regulatory-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NC_004337.2\|NP_706770.1\|878099_878804_-\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NC_004337.2\|NP_706761.1\|867785_869444_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226121
NC_004337.2\|NP_706764.2\|870547_871663_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NC_004337.2\|NP_706776.1\|888774_889389_+\|lipoprotein-chaperone	unknown	unknown	gnl\|CDD\|129638
NC_004337.2\|NP_706760.1\|867058_867334_-\|insertion-element-IS1-protein-InsA	unknown	unknown	gnl\|CDD\|226202
NC_004337.2\|NP_706768.2\|874576_876853_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|236828
NC_004337.2\|NP_706769.1\|877596_877815_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NC_004337.2\|NP_706767.1\|874225_874546_+\|ATP-dependent-Clp-protease-adaptor-protein-ClpS	unknown	unknown	gnl\|CDD\|178809
NC_004337.2\|NP_706762.1\|869440_870433_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225537
NC_004337.2\|NP_706778.1\|890833_892126_+\|seryl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235461
NC_004337.2\|NP_706771.1\|878845_880567_-\|cysteine/glutathione-ABC-transporter-membrane/ATP-binding-protein	unknown	unknown	gnl\|CDD\|236865

Protein	Function_ID	Function_description	E-value
NC_004337.2\|NP_706775.1\|884594_888623_+\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NC_004337.2\|NP_706765.1\|871659_873606_+\|macrolide-transporter-ATP-binding-/permease	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NC_004337.2\|NP_706773.2\|882456_883422_-\|thioredoxin-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NC_004337.2\|NP_706774.2\|883965_884460_+\|leucine-responsive-transcriptional-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NC_004337.2\|NP_706776.1\|888774_889389_+\|lipoprotein-chaperone	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	9.15011e-126
NC_004337.2\|NP_706777.1\|889399_890743_+\|recombination-factor-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NC_004337.2\|NP_706759.2\|866636_867140_-\|insertion-element-IS1-protein-InsB	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	8.69425e-76
NC_004337.2\|NP_706772.1\|880567_882334_-\|cysteine/glutathione-ABC-transporter-membrane/ATP-binding-protein	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NC_004337.2\|NP_706766.1\|873678_873903_-\|stationary-phase/starvation-inducible-regulatory-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NC_004337.2\|NP_706770.1\|878099_878804_-\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.45002e-139
NC_004337.2\|NP_706761.1\|867785_869444_+\|hypothetical-protein	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NC_004337.2\|NP_706764.2\|870547_871663_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NC_004337.2\|NP_706760.1\|867058_867334_-\|insertion-element-IS1-protein-InsA	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.30854e-25
NC_004337.2\|NP_706768.2\|874576_876853_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NC_004337.2\|NP_706769.1\|877596_877815_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NC_004337.2\|NP_706767.1\|874225_874546_+\|ATP-dependent-Clp-protease-adaptor-protein-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NC_004337.2\|NP_706762.1\|869440_870433_-\|hypothetical-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	5.15674e-132
NC_004337.2\|NP_706778.1\|890833_892126_+\|seryl-tRNA-synthetase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NC_004337.2\|NP_706771.1\|878845_880567_-\|cysteine/glutathione-ABC-transporter-membrane/ATP-binding-protein	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0

>NC_004337.2|NP_706768.2|874576_876853_+|ATP-dependent-Clp-protease-ATP-binding-subunit
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRSQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKKLSDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NC_004337.2|NP_706767.1|874225_874546_+|ATP-dependent-Clp-protease-adaptor-protein-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NC_004337.2|NP_706766.1|873678_873903_-|stationary-phase/starvation-inducible-regulatory-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NC_004337.2|NP_706765.1|871659_873606_+|macrolide-transporter-ATP-binding-/permease
MTPLLELKDIRRSYPAGDEQVEVLKGISLNIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDIATLDADALAQLRREHFGFIFQRYHLLPHLTVEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTATGILFGWLPARNAARLDPVDALARE
>NC_004337.2|NP_706764.2|870547_871663_+|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NC_004337.2|NP_706763.1|870501_870636_+|hypothetical-protein
MKLMTRIGIWSIQNIYEKAENREEALRYCAGDSHRRTDYVMENS
>NC_004337.2|NP_706762.1|869440_870433_-|hypothetical-protein
MVKSTSCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRCSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG
>NC_004337.2|NP_706761.1|867785_869444_+|hypothetical-protein
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NC_004337.2|NP_706760.1|867058_867334_-|insertion-element-IS1-protein-InsA
MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYIASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR
>NC_004337.2|NP_706759.2|866636_867140_-|insertion-element-IS1-protein-InsB
MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYACDRIRRTAVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
>NC_004337.2|NP_706769.1|877596_877815_-|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NC_004337.2|NP_706770.1|878099_878804_-|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
>NC_004337.2|NP_706771.1|878845_880567_-|cysteine/glutathione-ABC-transporter-membrane/ATP-binding-protein
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGSVMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPKQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARTLLHDAPLVLLDEPTEGLDATTESQILELLAKMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NC_004337.2|NP_706772.1|880567_882334_-|cysteine/glutathione-ABC-transporter-membrane/ATP-binding-protein
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELALTDPLTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAAKLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI
>NC_004337.2|NP_706773.2|882456_883422_-|thioredoxin-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMARMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NC_004337.2|NP_706774.2|883965_884460_+|leucine-responsive-transcriptional-regulator
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NC_004337.2|NP_706775.1|884594_888623_+|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNSAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQQVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NC_004337.2|NP_706776.1|888774_889389_+|lipoprotein-chaperone
MMKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NC_004337.2|NP_706777.1|889399_890743_+|recombination-factor-protein-RarA
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDDTRRAIAELVNGDARRALNTLEMMADMAEVYDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NC_004337.2|NP_706778.1|890833_892126_+|seryl-tRNA-synthetase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG

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Crispr_ID: NC_004337_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_004337_3

2363954-2364080

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_004337_3

>merge|NC_004337|3|2363954-2364080|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>NC_004337|3|3|2363954-2364080|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_004337.2\|NP_708123.3\|2359907_2360747_+\|IS2-ORF2	unknown	unknown	gnl\|CDD\|181829
NC_004337.2\|NP_708133.2\|2372273_2373464_+\|sn-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NC_004337.2\|NP_708126.1\|2365266_2365521_+\|2Fe-2S-ferredoxin	unknown	unknown	gnl\|CDD\|182668
NC_004337.2\|NP_708119.2\|2349774_2350398_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225774
NC_004337.2\|NP_708121.1\|2355005_2355728_+\|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NC_004337.2\|NP_708132.2\|2371017_2372277_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	unknown	unknown	gnl\|CDD\|225617
NC_004337.2\|NP_708127.1\|2365574_2366225_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182136
NC_004337.2\|NP_708120.1\|2352231_2354859_-\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NC_004337.2\|NP_708130.1\|2367768_2369127_-\|sn-glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NC_004337.2\|NP_708129.2\|2366687_2367764_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NC_004337.2\|NP_708117.1\|2346257_2347097_-\|insertion-sequence-element-IS911-integrase-core-domain-containing-protein	unknown	unknown	gnl\|CDD\|222853
NC_004337.2\|NP_708113.2\|2338428_2341278_-\|hybrid-sensory-kinase-in-two-component-regulatory-system-with-RcsB-and-YojN	unknown	unknown	gnl\|CDD\|182772
NC_004337.2\|NP_708134.1\|2373656_2374607_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
NC_004337.2\|NP_708115.1\|2342333_2343983_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227732
NC_004337.2\|NP_708124.1\|2361617_2363903_+\|ribonucleotide-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NC_004337.2\|NP_708114.1\|2341552_2342329_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227021
NC_004337.2\|NP_708131.2\|2369399_2371028_+\|sn-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NC_004337.2\|NP_708128.1\|2366439_2366646_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182050
NC_004337.2\|NP_708118.1\|2347123_2347462_-\|insertion-sequence-element-IS911-transposase-InsN	unknown	unknown	gnl\|CDD\|225511
NC_004337.2\|NP_708125.4\|2364097_2365267_+\|ribonucleoside-diphosphate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|181647

Protein	Function_ID	Function_description	E-value
NC_004337.2\|NP_708123.3\|2359907_2360747_+\|IS2-ORF2	gnl\|CDD\|181829	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed.	0
NC_004337.2\|NP_708133.2\|2372273_2373464_+\|sn-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NC_004337.2\|NP_708126.1\|2365266_2365521_+\|2Fe-2S-ferredoxin	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	1.23742e-52
NC_004337.2\|NP_708119.2\|2349774_2350398_-\|hypothetical-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	2.24238e-138
NC_004337.2\|NP_708121.1\|2355005_2355728_+\|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.1156e-171
NC_004337.2\|NP_708132.2\|2371017_2372277_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NC_004337.2\|NP_708127.1\|2365574_2366225_-\|hypothetical-protein	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	3.98056e-158
NC_004337.2\|NP_708120.1\|2352231_2354859_-\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NC_004337.2\|NP_708130.1\|2367768_2369127_-\|sn-glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NC_004337.2\|NP_708129.2\|2366687_2367764_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NC_004337.2\|NP_708117.1\|2346257_2347097_-\|insertion-sequence-element-IS911-integrase-core-domain-containing-protein	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.01621e-152
NC_004337.2\|NP_708113.2\|2338428_2341278_-\|hybrid-sensory-kinase-in-two-component-regulatory-system-with-RcsB-and-YojN	gnl\|CDD\|182772	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC.	0
NC_004337.2\|NP_708134.1\|2373656_2374607_+\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NC_004337.2\|NP_708115.1\|2342333_2343983_-\|hypothetical-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.71163e-127
NC_004337.2\|NP_708124.1\|2361617_2363903_+\|ribonucleotide-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NC_004337.2\|NP_708114.1\|2341552_2342329_-\|hypothetical-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	3.30839e-153
NC_004337.2\|NP_708131.2\|2369399_2371028_+\|sn-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NC_004337.2\|NP_708128.1\|2366439_2366646_+\|hypothetical-protein	gnl\|CDD\|182050	PRK09729, PRK09729, hypothetical protein; Provisional.	1.03928e-38
NC_004337.2\|NP_708118.1\|2347123_2347462_-\|insertion-sequence-element-IS911-transposase-InsN	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.28281e-17
NC_004337.2\|NP_708125.4\|2364097_2365267_+\|ribonucleoside-diphosphate-reductase-1-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0

>NC_004337.2|NP_708124.1|2361617_2363903_+|ribonucleotide-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPTIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NC_004337.2|NP_708123.3|2359907_2360747_+|IS2-ORF2
MSRAQLHVILRRTDDWKDGRRSRHSDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRIYRLMRQNALLLERKLAVPPSKRAHTGRVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCDRKALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
>NC_004337.2|NP_708121.1|2355005_2355728_+|bifunctional-3-demethylubiquinone-9-3-methyltransferase/-2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNSFKLGPGVDVNYMLHTQNK
>NC_004337.2|NP_708120.1|2352231_2354859_-|DNA-gyrase-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NC_004337.2|NP_708119.2|2349774_2350398_-|hypothetical-protein
MRHGLLALICWLCCVVAHSEMLNVEQSRLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGSGKNGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NC_004337.2|NP_708118.1|2347123_2347462_-|insertion-sequence-element-IS911-transposase-InsN
MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQKYTVADAAKAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSR
>NC_004337.2|NP_708117.1|2346257_2347097_-|insertion-sequence-element-IS911-integrase-core-domain-containing-protein
MVTLCHVFGVHRSSYRYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
>NC_004337.2|NP_708115.1|2342333_2343983_-|hypothetical-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPSVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQELIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NC_004337.2|NP_708114.1|2341552_2342329_-|hypothetical-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NC_004337.2|NP_708113.2|2338428_2341278_-|hybrid-sensory-kinase-in-two-component-regulatory-system-with-RcsB-and-YojN
MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPCVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPHNKGVKGLSGKRCCLTVPNASLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRDS
>NC_004337.2|NP_708125.4|2364097_2365267_+|ribonucleoside-diphosphate-reductase-1-subunit-beta
MPYPALNSQQDTLMAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NC_004337.2|NP_708126.1|2365266_2365521_+|2Fe-2S-ferredoxin
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEL
>NC_004337.2|NP_708127.1|2365574_2366225_-|hypothetical-protein
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NC_004337.2|NP_708128.1|2366439_2366646_+|hypothetical-protein
MNFIRQGLGIALQPELTLKSIAGELCSVPHEPTFYRQISLLTKEKPVEGSPLFLLQMCMEQLVAIGKI
>NC_004337.2|NP_708129.2|2366687_2367764_-|glycerophosphodiester-phosphodiesterase
MKLKLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NC_004337.2|NP_708130.1|2367768_2369127_-|sn-glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLRFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFFYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NC_004337.2|NP_708131.2|2369399_2371028_+|sn-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NC_004337.2|NP_708132.2|2371017_2372277_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-B
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRATWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIRETILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NC_004337.2|NP_708133.2|2372273_2373464_+|sn-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWCKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NC_004337.2|NP_708134.1|2373656_2374607_+|hypothetical-protein
MTESTTSSPHDAVFKTFIFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRPMRYATAAMQSHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDHDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKLVGLQQGKLEGLQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH

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Crispr_ID: NC_004337_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_004337_4

2832890-2833036

Unclear

Consensus_repeat	Method
CTGCTTAAAAAAAGAACAAATGGTAGTGTCCGCTATTGCCAGTACACCTCAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_004337_4

>merge|NC_004337|4|2832890-2833036|CRISPRCasFinder
CTGCTTAAAAAAAGAACAAATGGTAGTGTCCGCTATTGCCAGTACACCTCAAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATGGCTGCTTAAAAAAAGAACAAATGGTAGTGTCCGCTATTGCCAGTACACCTCAAA

>NC_004337|4|4|2832890-2833036|CRISPRCasFinder
CTGCTTAAAAAAAGAACAAATGGTAGTGTCCGCTATTGCCAGTACACCTCAAA	TATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATGG
CTGCTTAAAAAAAGAACAAATGGTAGTGTCCGCTATTGCCAGTACACCTCAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_004337.2\|NP_708533.1\|2824800_2825154_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371708
NC_004337.2\|YP_008439274.1\|2825947_2826142_-\|hypothetical-protein	unknown	unknown	unknown
NC_004337.2\|NP_708531.2\|2821643_2822612_+\|hydrogenase-expression/formation-protein-HypE	unknown	unknown	gnl\|CDD\|273984
NC_004337.2\|NP_708549.2\|2841648_2842410_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NC_004337.2\|NP_708532.2\|2822685_2824764_+\|formate-hydrogenlyase-transcriptional-activator-FhlA	unknown	unknown	gnl\|CDD\|237965
NC_004337.2\|NP_708545.1\|2838167_2838575_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NC_004337.2\|NP_708530.1\|2820483_2821605_+\|hydrogenase-isoenzymes-formation-protein-HypD	unknown	unknown	gnl\|CDD\|237892
NC_004337.2\|NP_708529.1\|2820211_2820484_+\|hydrogenase-assembly-chaperone	unknown	unknown	gnl\|CDD\|182435
NC_004337.2\|NP_708542.1\|2835644_2836208_+\|regulatory-protein	unknown	unknown	gnl\|CDD\|311152
NC_004337.2\|NP_708547.2\|2839749_2840889_-\|lipoprotein-NlpD	unknown	unknown	gnl\|CDD\|236782
NC_004337.2\|NP_708550.1\|2842390_2843440_-\|tRNA-pseudouridine-synthase-D	unknown	unknown	gnl\|CDD\|234884
NC_004337.2\|NP_708534.1\|2825216_2825720_-\|insertion-element-IS1-protein-InsB	unknown	unknown	gnl\|CDD\|281403
NC_004337.2\|NP_708537.1\|2829587_2830385_-\|DeoR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NC_004337.2\|NP_708536.1\|2826217_2828779_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
NC_004337.2\|NP_708546.1\|2838694_2839723_-\|RNA-polymerase-sigma-factor-RpoS	unknown	unknown	gnl\|CDD\|235548
NC_004337.2\|NP_708544.1\|2837427_2838021_-\|phenylacrylic-acid-decarboxylase-like-protein	unknown	unknown	gnl\|CDD\|223241
NC_004337.2\|NP_708548.1\|2841028_2841655_-\|protein-L-isoaspartate-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NC_004337.2\|NP_708540.2\|2833130_2835227_-\|phage-transposase	unknown	unknown	gnl\|CDD\|378147
NC_004337.2\|NP_708538.1\|2831740_2832043_+\|insertion-sequence-element-IS600-transposase	unknown	unknown	gnl\|CDD\|366690
NC_004337.2\|NP_708541.1\|2835228_2835480_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|225957

Protein	Function_ID	Function_description	E-value
NC_004337.2\|NP_708533.1\|2824800_2825154_-\|hypothetical-protein	gnl\|CDD\|371708	pfam11756, YgbA_NO, Nitrous oxide-stimulated promoter. The function of ygaB is not known but it is a promoter that is stimulated by the presence of nitrous oxide. It is regulated by the gene-product of the bacterial nsrR gene.	3.52999e-49
NC_004337.2\|NP_708530.1\|2820483_2821605_+\|hydrogenase-isoenzymes-formation-protein-HypD	gnl\|CDD\|237892	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional.	0
NC_004337.2\|NP_708531.2\|2821643_2822612_+\|hydrogenase-expression/formation-protein-HypE	gnl\|CDD\|273984	TIGR02124, Hydrogenase_expression/formation_protein_HypE, hydrogenase expression/formation protein HypE. This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (TIGR01379) and other enzymes.	2.10563e-176
NC_004337.2\|NP_708532.2\|2822685_2824764_+\|formate-hydrogenlyase-transcriptional-activator-FhlA	gnl\|CDD\|237965	PRK15429, PRK15429, formate hydrogenlyase transcriptional activator FlhA.	0
NC_004337.2\|NP_708545.1\|2838167_2838575_+\|transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.77508e-17
NC_004337.2\|NP_708549.2\|2841648_2842410_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	8.00601e-147
NC_004337.2\|NP_708529.1\|2820211_2820484_+\|hydrogenase-assembly-chaperone	gnl\|CDD\|182435	PRK10409, PRK10409, HypC/HybG/HupF family hydrogenase formation chaperone.	6.54385e-60
NC_004337.2\|NP_708542.1\|2835644_2836208_+\|regulatory-protein	gnl\|CDD\|311152	pfam07022, Phage_CI_repr, Bacteriophage CI repressor helix-turn-helix domain. This family consists of several phage CI repressor proteins and related bacterial sequences. The CI repressor is known to function as a transcriptional switch, determining whether transcription is lytic or lysogenic.	0.00262764
NC_004337.2\|NP_708547.2\|2839749_2840889_-\|lipoprotein-NlpD	gnl\|CDD\|236782	PRK10871, nlpD, murein hydrolase activator NlpD.	0
NC_004337.2\|NP_708550.1\|2842390_2843440_-\|tRNA-pseudouridine-synthase-D	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NC_004337.2\|NP_708534.1\|2825216_2825720_-\|insertion-element-IS1-protein-InsB	gnl\|CDD\|281403	pfam03400, DDE_Tnp_IS1, IS1 transposase. Transposase proteins are necessary for efficient DNA transposition. This family represents bacterial IS1 transposases.	1.31729e-76
NC_004337.2\|NP_708537.1\|2829587_2830385_-\|DeoR-family-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	2.51021e-92
NC_004337.2\|NP_708536.1\|2826217_2828779_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NC_004337.2\|NP_708546.1\|2838694_2839723_-\|RNA-polymerase-sigma-factor-RpoS	gnl\|CDD\|235548	PRK05657, PRK05657, RNA polymerase sigma factor RpoS; Validated.	0
NC_004337.2\|NP_708544.1\|2837427_2838021_-\|phenylacrylic-acid-decarboxylase-like-protein	gnl\|CDD\|223241	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism].	6.71668e-108
NC_004337.2\|NP_708548.1\|2841028_2841655_-\|protein-L-isoaspartate-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	2.77273e-125
NC_004337.2\|NP_708540.2\|2833130_2835227_-\|phage-transposase	gnl\|CDD\|378147	pfam09299, Mu-transpos_C, Mu transposase, C-terminal. Members of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology.	5.3866e-19
NC_004337.2\|NP_708538.1\|2831740_2832043_+\|insertion-sequence-element-IS600-transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	1.79934e-15
NC_004337.2\|NP_708541.1\|2835228_2835480_-\|DNA-binding-protein	gnl\|CDD\|225957	COG3423, Nlp, Predicted transcriptional regulator [Transcription].	1.5241e-19

>NC_004337.2|NP_708538.1|2831740_2832043_+|insertion-sequence-element-IS600-transposase
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
>NC_004337.2|NP_708537.1|2829587_2830385_-|DeoR-family-transcriptional-regulator
MSAGQRKEQKLIPVERRQIILEMVAEKGIVSIAELTDRINVSHMTIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVLPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLCSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE
>NC_004337.2|NP_708536.1|2826217_2828779_+|DNA-mismatch-repair-protein-MutS
MSAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRSNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV
>NC_004337.2|YP_008439274.1|2825947_2826142_-|hypothetical-protein
MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIVSIGEPFFFRVIVPFKIKVMLPTY
>NC_004337.2|NP_708534.1|2825216_2825720_-|insertion-element-IS1-protein-InsB
MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSLSFSKSVELHDKVIGHYLNIKHYQ
>NC_004337.2|NP_708533.1|2824800_2825154_-|hypothetical-protein
MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPRE
>NC_004337.2|NP_708532.2|2822685_2824764_+|formate-hydrogenlyase-transcriptional-activator-FhlA
MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQLAAGGLYPKFGHYCLMPLAAGGHIFGGCEFIRYDERPWSEKEFNRLQTFTQIVSVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINLYERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGSGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGANAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDIALPEPETPPAATVVAQEGEDEYQLIVRVLKETNSVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKSALI
>NC_004337.2|NP_708531.2|2821643_2822612_+|hydrogenase-expression/formation-protein-HypE
MQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAGSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC
>NC_004337.2|NP_708530.1|2820483_2821605_+|hydrogenase-isoenzymes-formation-protein-HypD
MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA
>NC_004337.2|NP_708529.1|2820211_2820484_+|hydrogenase-assembly-chaperone
MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK
>NC_004337.2|NP_708540.2|2833130_2835227_-|phage-transposase
MQSYVTVNDLLGVPGMPATTKGIRQALQRFSRDLGDVSRRREGTKAIEYHIDCLPEITRKALRERYVEQLVATENNVSEVKAVTRKTRNPDAVQAIEAYRGSPQLMEERLNALTENQRWVSEARAALVVEVLKLESAGNPGRLKAINFLVEKARKGELPERLQQAAVNANAKRGANRTISRDPLYQWVLKYNQSQNAAERLLLLAPGKRDEIKPEEISWLPEFLAQYRQVNGRPMSEAYEDFVAEWQRRHADEPYMLEVMPSYDVVRYAMKKLPEVVKQKGRVTGSEYRQLEGFTRRDWTAMPVNYVWIGDGHGMKLKCAHPIHGRPFSPEVTFVIDGGTRFVVGWSLDLAENVFAVAGAIQHGIRNHGKPFLYYSDNGSGETADMLDKEVVGILPRLGIKHPTGIAGNPQGRGIIERLNRTLPMRIARRYRTYFGKGADRESLRVLNRDLRSAFNALQQDKPLNDRQKAAMRELPSWAELIEAIREGVEWYNNRPHSELPMKPNGRHYSPTEFRKKRQAEEDTEIEWLSDLELRDMFRPMVERPVRRCEIQWLNNIYYAPELRDEHGRKVLISYDIHDAERITVRRKDGSFICEAIWNGNKRAAFAVSAEYHKQQQRIKGMRKRAEEKIRDAEDEGIQILEHKQAEPWLSNVYRPVGNVVAVQQPEYEEEHDEEFERDFRLGMQKLFAMQEEDDPLA
>NC_004337.2|NP_708541.1|2835228_2835480_-|DNA-binding-protein
MRQREDSDRDWPSLKIQLALKDNGWSSFRELSLHAGYAQDSLKAVVRTPNKKYERVISDAIGVPPEIIWPSRYRNDGFIRKAS
>NC_004337.2|NP_708542.1|2835644_2836208_+|regulatory-protein
MRKAPQGSFPADGKEPIIERIFRLVERYPSRNAAARAWGINEGTLKNYYNRRDYAPIPRPYQLKKIAESENVTLEWLMTGEGDVELKDSKEPKKENADNVDAQILMFLSFLKPQEKQQVADVLGRKGAEQLLILLDEHIQELHALVGVRRAIALSLGNLPDEKVREIYALSEAKGDHLNLPQKAASA
>NC_004337.2|NP_708544.1|2837427_2838021_-|phenylacrylic-acid-decarboxylase-like-protein
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADFSHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE
>NC_004337.2|NP_708545.1|2838167_2838575_+|transcriptional-regulator
MALRNKAFHQLRQLFQQHTARWQHELPDLTKPQYAVMRAIADKPGIEQVALIEAAVSTKATLAEMLARMENRGLVRREHDVADKRRRFVWLTAEGEKLLAAAIPIGDSVDEEFLGRLSGEEQELFMQLVRKMMST
>NC_004337.2|NP_708546.1|2838694_2839723_-|RNA-polymerase-sigma-factor-RpoS
MFRQGITGRSHLMSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRK
>NC_004337.2|NP_708547.2|2839749_2840889_-|lipoprotein-NlpD
MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAPANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSYSGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGGNAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPTATTVTAPVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR
>NC_004337.2|NP_708548.1|2841028_2841655_-|protein-L-isoaspartate-O-methyltransferase
MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLETGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA
>NC_004337.2|NP_708549.2|2841648_2842410_-|5'/3'-nucleotidase-SurE
MRILLSNYDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVQDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NC_004337.2|NP_708550.1|2842390_2843440_-|tRNA-pseudouridine-synthase-D
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHSREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE

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Crispr_ID: NC_004337_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_004337_5

3246675-3246776

Orphan

Consensus_repeat	Method
TACAAAACACAACAACATCAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_004337_5

>merge|NC_004337|5|3246675-3246776|CRISPRCasFinder
TACAAAACACAACAACATCAACAAATTAAACACCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCATCAGGTACAAAACACAACAACATCAACAA

>NC_004337|5|5|3246675-3246776|CRISPRCasFinder
TACAAAACACAACAACATCAACAA	ATTAAACACCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCATCAGG
TACAAAACACAACAACATCAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_004337.2\|NP_708911.1\|3244744_3245641_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
NC_004337.2\|NP_708915.1\|3248183_3249515_-\|transport-system-permease	unknown	unknown	gnl\|CDD\|273283
NC_004337.2\|NP_708914.3\|3246845_3248156_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226206
NC_004337.2\|NP_708917.2\|3251225_3251615_-\|endoribonuclease-L-PSP	unknown	unknown	gnl\|CDD\|105214
NC_004337.2\|NP_708909.2\|3242890_3243877_+\|transferase	unknown	unknown	gnl\|CDD\|223512
NC_004337.2\|NP_708920.1\|3255190_3256522_-\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
NC_004337.2\|NP_708923.1\|3258759_3259104_+\|DNA-binding-transcriptional-activator-TdcR	unknown	unknown	gnl\|CDD\|236909
NC_004337.2\|NP_708905.2\|3241337_3241643_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226941
NC_004337.2\|NP_708921.1\|3256543_3257533_-\|threonine-dehydratase	unknown	unknown	gnl\|CDD\|236317
NC_004337.2\|NP_708907.1\|3242039_3242339_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372871
NC_004337.2\|NP_708919.4\|3253956_3255165_-\|kinase	unknown	unknown	gnl\|CDD\|183484
NC_004337.2\|NP_708918.1\|3251628_3253923_-\|formate-acetyltransferase-3	unknown	unknown	gnl\|CDD\|153087
NC_004337.2\|NP_708906.1\|3241645_3242050_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227681
NC_004337.2\|NP_708913.2\|3246469_3246634_+\|hypothetical-protein	unknown	unknown	unknown
NC_004337.2\|NP_708908.1\|3242434_3242821_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225168
NC_004337.2\|NP_708922.1\|3257631_3258570_-\|DNA-binding-transcriptional-activator-TdcA	unknown	unknown	gnl\|CDD\|182391
NC_004337.2\|NP_708904.2\|3240430_3240799_+\|EnvZ/OmpR-regulon-moderator	unknown	unknown	gnl\|CDD\|236728
NC_004337.2\|NP_708912.1\|3245745_3246447_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224655
NC_004337.2\|NP_708916.2\|3249789_3251154_-\|L-serine-dehydratase-TdcG	unknown	unknown	gnl\|CDD\|185000
NC_004337.2\|NP_708910.2\|3244169_3244538_+\|cytochrome	unknown	unknown	gnl\|CDD\|225694

Protein	Function_ID	Function_description	E-value
NC_004337.2\|NP_708911.1\|3244744_3245641_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.14774e-51
NC_004337.2\|NP_708915.1\|3248183_3249515_-\|transport-system-permease	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	3.70243e-166
NC_004337.2\|NP_708914.3\|3246845_3248156_-\|hypothetical-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
NC_004337.2\|NP_708917.2\|3251225_3251615_-\|endoribonuclease-L-PSP	gnl\|CDD\|105214	PRK11401, PRK11401, enamine/imine deaminase.	2.43767e-83
NC_004337.2\|NP_708909.2\|3242890_3243877_+\|transferase	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
NC_004337.2\|NP_708920.1\|3255190_3256522_-\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
NC_004337.2\|NP_708923.1\|3258759_3259104_+\|DNA-binding-transcriptional-activator-TdcR	gnl\|CDD\|236909	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional.	1.4676e-66
NC_004337.2\|NP_708905.2\|3241337_3241643_+\|hypothetical-protein	gnl\|CDD\|226941	COG4575, ElaB, Uncharacterized conserved protein [Function unknown].	1.46625e-41
NC_004337.2\|NP_708921.1\|3256543_3257533_-\|threonine-dehydratase	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
NC_004337.2\|NP_708907.1\|3242039_3242339_+\|hypothetical-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	2.67488e-19
NC_004337.2\|NP_708919.4\|3253956_3255165_-\|kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0
NC_004337.2\|NP_708918.1\|3251628_3253923_-\|formate-acetyltransferase-3	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NC_004337.2\|NP_708906.1\|3241645_3242050_+\|hypothetical-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	2.73939e-60
NC_004337.2\|NP_708922.1\|3257631_3258570_-\|DNA-binding-transcriptional-activator-TdcA	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
NC_004337.2\|NP_708908.1\|3242434_3242821_+\|hypothetical-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	5.33333e-15
NC_004337.2\|NP_708904.2\|3240430_3240799_+\|EnvZ/OmpR-regulon-moderator	gnl\|CDD\|236728	PRK10629, PRK10629, EnvZ/OmpR regulon moderator MzrA.	1.48728e-69
NC_004337.2\|NP_708912.1\|3245745_3246447_+\|hypothetical-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	2.70011e-68
NC_004337.2\|NP_708916.2\|3249789_3251154_-\|L-serine-dehydratase-TdcG	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
NC_004337.2\|NP_708910.2\|3244169_3244538_+\|cytochrome	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	2.32064e-42

>NC_004337.2|NP_708913.2|3246469_3246634_+|hypothetical-protein
MSKKSTKKRQPAKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA
>NC_004337.2|NP_708912.1|3245745_3246447_+|hypothetical-protein
MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDTCPQRENPLIQKLALNMDKQQLIASPEGAMGSLQLRQQVWLHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV
>NC_004337.2|NP_708911.1|3244744_3245641_-|LysR-family-transcriptional-regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFAGK
>NC_004337.2|NP_708910.2|3244169_3244538_+|cytochrome
MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTIIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEQE
>NC_004337.2|NP_708909.2|3242890_3243877_+|transferase
MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG
>NC_004337.2|NP_708908.1|3242434_3242821_+|hypothetical-protein
MILSIDSNDANSAPLHKKTISSLSGAVESMMKKLEDVGVLVAHILMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIGRLLNKKW
>NC_004337.2|NP_708907.1|3242039_3242339_+|hypothetical-protein
MSSKVERERRKAQLLSQIQQQRLDLSASSREWLEATGAYDRRWNMLLSLRSWALVGSRVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG
>NC_004337.2|NP_708906.1|3241645_3242050_+|hypothetical-protein
MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ
>NC_004337.2|NP_708905.2|3241337_3241643_+|hypothetical-protein
MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR
>NC_004337.2|NP_708904.2|3240430_3240799_+|EnvZ/OmpR-regulon-moderator
MSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG
>NC_004337.2|NP_708914.3|3246845_3248156_-|hypothetical-protein
MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTHQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITAIMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR
>NC_004337.2|NP_708915.1|3248183_3249515_-|transport-system-permease
MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTDMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSSIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSLFLAFS
>NC_004337.2|NP_708916.2|3249789_3251154_-|L-serine-dehydratase-TdcG
MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPCRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>NC_004337.2|NP_708917.2|3251225_3251615_-|endoribonuclease-L-PSP
MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA
>NC_004337.2|NP_708918.1|3251628_3253923_-|formate-acetyltransferase-3
MKVDIDTSDKLYADAWLGFKGTDWKSEINVRDFIQHNYTPYEGDESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL
>NC_004337.2|NP_708919.4|3253956_3255165_-|kinase
MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVEIDTEMNNRSNSFGERIVSSENAHVICVVIPTNEEKMIALDAIHLGKVNAPAEFA
>NC_004337.2|NP_708920.1|3255190_3256522_-|threonine/serine-transporter-TdcC
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSLGKLNTLSMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF
>NC_004337.2|NP_708921.1|3256543_3257533_-|threonine-dehydratase
MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA
>NC_004337.2|NP_708922.1|3257631_3258570_-|DNA-binding-transcriptional-activator-TdcA
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSYNGCRRRQLIEVG
>NC_004337.2|NP_708923.1|3258759_3259104_+|DNA-binding-transcriptional-activator-TdcR
MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	263460-263500	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	311790-311830	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	317155-317195	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	325582-325622	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	330412-330452	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	700355-700395	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	712958-712998	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	725781-725821	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	827014-827054	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1081767-1081807	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1390353-1390393	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1402281-1402321	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1414941-1414981	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1426917-1426957	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1467499-1467539	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1475913-1475953	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1575749-1575789	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1592695-1592735	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1828338-1828378	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1843681-1843721	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1939732-1939772	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1964469-1964509	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	2050221-2050261	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	2057249-2057289	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	2072012-2072052	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	2083088-2083128	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	2204900-2204940	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	3058230-3058270	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	3354627-3354667	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	3912577-3912617	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	4463794-4463834	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	4532497-4532537	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851.1	6115-6155	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851.1	88361-88401	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851.1	98103-98143	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851.1	196736-196776	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851.1	206336-206376	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1306795-1306835	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	1582560-1582600	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004337.2	2695475-2695515	1	0.976

1. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 263460-263500, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

2. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 311790-311830, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

3. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 317155-317195, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

4. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 325582-325622, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

5. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 330412-330452, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

6. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 700355-700395, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

7. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 712958-712998, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

8. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 725781-725821, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

9. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 827014-827054, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

10. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1081767-1081807, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

11. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1390353-1390393, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

12. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1402281-1402321, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

13. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1414941-1414981, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

14. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1426917-1426957, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

15. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1467499-1467539, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

16. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1475913-1475953, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

17. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1575749-1575789, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

18. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1592695-1592735, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

19. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1828338-1828378, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

20. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1843681-1843721, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

21. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1939732-1939772, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

22. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1964469-1964509, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

23. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 2050221-2050261, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

24. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 2057249-2057289, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

25. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 2072012-2072052, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

26. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 2083088-2083128, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

27. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 2204900-2204940, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

28. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 3058230-3058270, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

29. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 3354627-3354667, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

30. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 3912577-3912617, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

31. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 4463794-4463834, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

32. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 4532497-4532537, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

33. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 6115-6155, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

34. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 88361-88401, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

35. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 98103-98143, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

36. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 196736-196776, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

37. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 206336-206376, mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

38. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1306795-1306835, mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcaaccttcagggaaaaatatcatcagatgg	Protospacer
*************.***************************

39. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 1582560-1582600, mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcaaccttcagggaaaaatatcatcagatgg	Protospacer
*************.***************************

40. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to position: 2695475-2695515, mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaacatcatcagatgg	Protospacer
****************************.************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031904	Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence	56942-56982	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP051632	Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence	14193-14233	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP051632	Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence	50406-50446	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP051632	Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence	42057-42097	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP051632	Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence	60761-60801	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045829	Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence	18468-18508	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025921	Escherichia coli strain 103605 plasmid p103605_146, complete sequence	45991-46031	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025911	Escherichia coli strain 204446 plasmid p204446_146, complete sequence	144957-144997	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045864	Escherichia coli O157:H7 strain ATCC 43890 plasmid p1CFSAN076619, complete sequence	86612-86652	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026783	Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence	64080-64120	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015246	Escherichia coli O91 str. RM7190 plasmid pRM7190-2, complete sequence	59125-59165	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015246	Escherichia coli O91 str. RM7190 plasmid pRM7190-2, complete sequence	27560-27600	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015816	Escherichia coli O157:H7 strain JEONG-1266 plasmid p0157, complete sequence	35391-35431	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028608	Escherichia coli strain 143 plasmid pTA143, complete sequence	43453-43493	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_011752	Escherichia coli 55989 plasmid 55989p, complete sequence	58604-58644	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024272	Escherichia coli strain F8111-1SC3 plasmid unnamed3, complete sequence	23910-23950	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024272	Escherichia coli strain F8111-1SC3 plasmid unnamed3, complete sequence	108932-108972	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031907	Escherichia coli O91:H21 strain FWSEC0008 plasmid unnamed17, complete sequence	38934-38974	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031907	Escherichia coli O91:H21 strain FWSEC0008 plasmid unnamed17, complete sequence	7370-7410	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP026798	Shigella boydii strain NCTC 9353 plasmid unnamed, complete sequence	117690-117730	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP026844	Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence	85631-85671	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP026844	Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence	4525-4565	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP023347	Escherichia coli strain ETEC-2265 plasmid unnamed1, complete sequence	109166-109206	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024227	Escherichia coli O169:H41 strain 2014EL-1345-2 plasmid unnamed4, complete sequence	5784-5824	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024227	Escherichia coli O169:H41 strain 2014EL-1345-2 plasmid unnamed4, complete sequence	70691-70731	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031911	Escherichia coli O121:H19 strain FWSEC0006 plasmid unnamed15, complete sequence	13993-14033	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031911	Escherichia coli O121:H19 strain FWSEC0006 plasmid unnamed15, complete sequence	32692-32732	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031911	Escherichia coli O121:H19 strain FWSEC0006 plasmid unnamed15, complete sequence	24345-24385	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031923	Escherichia coli O26:H11 strain FWSEC0001 plasmid unnamed6, complete sequence	26037-26077	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP054891	Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence	86207-86247	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP054891	Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence	184326-184366	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP054891	Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence	193944-193984	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP054891	Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence	206305-206345	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP042949	Escherichia coli strain ATCC 51435 plasmid pB2F1, complete sequence	89986-90026	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP042949	Escherichia coli strain ATCC 51435 plasmid pB2F1, complete sequence	58421-58461	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP042952	Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence	2544-2584	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026813	Shigella boydii strain 83-578 plasmid unnamed, complete sequence	47203-47243	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017848	Escherichia coli strain FMU073332 plasmid pEcoFMU07332d sequence	36263-36303	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP022688	Escherichia coli strain CDC#03-98 plasmid p0157, complete sequence	90581-90621	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	45676-45716	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	122632-122672	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	146857-146897	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	156472-156512	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	184876-184916	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	37903-37943	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	28156-28196	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	113529-113569	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	142660-142700	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	152264-152304	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	175520-175560	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	1046-1086	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	71813-71853	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	110524-110564	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	133782-133822	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	213351-213391	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026099	Shigella flexneri strain FDAARGOS_74 plasmid unnamed	25502-25542	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026099	Shigella flexneri strain FDAARGOS_74 plasmid unnamed	37863-37903	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026099	Shigella flexneri strain FDAARGOS_74 plasmid unnamed	47481-47521	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026099	Shigella flexneri strain FDAARGOS_74 plasmid unnamed	145608-145648	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024277	Escherichia coli O6:H16 strain M9682-C1 plasmid unnamed2, complete sequence	25859-25899	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026826	Shigella dysenteriae strain ATCC 12021 plasmid unnamed	70813-70853	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026826	Shigella dysenteriae strain ATCC 12021 plasmid unnamed	75272-75312	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026826	Shigella dysenteriae strain ATCC 12021 plasmid unnamed	78039-78079	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026826	Shigella dysenteriae strain ATCC 12021 plasmid unnamed	152121-152161	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026826	Shigella dysenteriae strain ATCC 12021 plasmid unnamed	182298-182338	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	50454-50494	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	60042-60082	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	169238-169278	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	159493-159533	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	77861-77901	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	87449-87489	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	198198-198238	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	188453-188493	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	74408-74448	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	158518-158558	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	184365-184405	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	196672-196712	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	228074-228114	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	64662-64702	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	26631-26671	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	103436-103476	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	125357-125397	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	134956-134996	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	16886-16926	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	156565-156605	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026791	Shigella flexneri strain 61-4982 plasmid unnamed, complete sequence	27424-27464	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026791	Shigella flexneri strain 61-4982 plasmid unnamed, complete sequence	49027-49067	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026791	Shigella flexneri strain 61-4982 plasmid unnamed, complete sequence	58623-58663	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	58377-58417	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	83905-83945	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	93504-93544	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	122635-122675	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	203140-203180	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	193395-193435	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024248	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed3, complete sequence	42145-42185	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024248	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed3, complete sequence	105696-105736	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024274	Escherichia coli strain F9792 plasmid unnamed, complete sequence	122377-122417	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024274	Escherichia coli strain F9792 plasmid unnamed, complete sequence	59632-59672	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026876	Shigella boydii strain ATCC 35964 plasmid unnamed, complete sequence	92489-92529	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026876	Shigella boydii strain ATCC 35964 plasmid unnamed, complete sequence	82793-82833	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026876	Shigella boydii strain ATCC 35964 plasmid unnamed, complete sequence	114413-114453	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026837	Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence	111995-112035	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026837	Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence	113793-113833	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026837	Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence	212579-212619	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032524	Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence	64384-64424	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032524	Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence	72760-72800	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032524	Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence	83035-83075	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032524	Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence	4381-4421	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032524	Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence	71386-71426	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015847	Escherichia coli O157:H7 strain FRIK2069 plasmid p0157, complete sequence	52352-52392	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027326	Escherichia coli strain 2013C-4830 plasmid unnamed1, complete sequence	4313-4353	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027326	Escherichia coli strain 2013C-4830 plasmid unnamed1, complete sequence	70322-70362	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027220	Escherichia coli strain 2015C-3163 plasmid unnamed, complete sequence	8388-8428	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027220	Escherichia coli strain 2015C-3163 plasmid unnamed, complete sequence	59983-60023	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_019000	Escherichia coli plasmid pHUSEC41-2, complete sequence	59685-59725	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP009053	Escherichia coli NCCP15648 plasmid p15648-3, complete sequence	64233-64273	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044146	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-1, complete sequence	38111-38151	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027460	Escherichia coli strain 90-3040 plasmid unnamed, complete sequence	34804-34844	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027460	Escherichia coli strain 90-3040 plasmid unnamed, complete sequence	43465-43505	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027350	Escherichia coli strain 2014C-3655 plasmid unnamed	81435-81475	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027350	Escherichia coli strain 2014C-3655 plasmid unnamed	11102-11142	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027350	Escherichia coli strain 2014C-3655 plasmid unnamed	73088-73128	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP019696	Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence	80177-80217	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP019696	Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence	94948-94988	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP019696	Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence	103561-103601	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP019696	Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence	113386-113426	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP019696	Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence	124699-124739	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044139	Escherichia coli O157 strain AR-0430 plasmid pAR-0430-3, complete sequence	63785-63825	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017250	Escherichia coli strain NADC 5570/86-24/6565 isolate mutant plasmid pO157, complete sequence	43378-43418	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027547	Escherichia coli strain 2013C-4187 plasmid unnamed, complete sequence	76042-76082	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027547	Escherichia coli strain 2013C-4187 plasmid unnamed, complete sequence	27527-27567	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027547	Escherichia coli strain 2013C-4187 plasmid unnamed, complete sequence	70037-70077	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	96766-96806	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	6115-6155	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	87020-87060	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	167533-167573	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	196664-196704	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	206219-206259	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038332	Escherichia coli O157:H7 strain NE 1092-2 plasmid pNE1092-1, complete sequence	45843-45883	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038308	Escherichia coli O157:H7 strain SS NE 1040-1 plasmid pNE1040-1, complete sequence	43439-43479	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038314	Escherichia coli O157:H7 strain OK1 plasmid pOK1-1, complete sequence	18813-18853	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026775	Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence	133853-133893	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026775	Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence	160715-160755	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026781	Shigella dysenteriae strain 53-3937 plasmid unnamed	9071-9111	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038323	Escherichia coli O157:H7 strain NE1127 plasmid pNE1127-1, complete sequence	43454-43494	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027391	Escherichia coli strain 2015C-4944 plasmid unnamed, complete sequence	17223-17263	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027391	Escherichia coli strain 2015C-4944 plasmid unnamed, complete sequence	40981-41021	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027391	Escherichia coli strain 2015C-4944 plasmid unnamed, complete sequence	98105-98145	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	95432-95472	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	6116-6156	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	85686-85726	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	166198-166238	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	195329-195369	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	204928-204968	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	77630-77670	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	100887-100927	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	110485-110525	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	139637-139677	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	220148-220188	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	210402-210442	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP053752	Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence	13954-13994	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP053752	Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence	28725-28765	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP053752	Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence	37292-37332	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP053752	Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence	47117-47157	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP053752	Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence	58430-58470	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_012487	Escherichia coli plasmid pO26-Vir, complete sequence	24414-24454	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	AP014654	Escherichia coli O169:H41 plasmid pEntYN10 DNA, complete sequence	34352-34392	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	AP014654	Escherichia coli O169:H41 plasmid pEntYN10 DNA, complete sequence	116692-116732	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	37401-37441	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	118305-118345	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	141563-141603	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	151163-151203	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	180294-180334	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	27656-27696	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_022333	Escherichia coli plasmid pCss165Kan DNA, complete genome, strain: 4266 delta cssB::Km	126566-126606	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP021680	Escherichia coli strain AR_0162 plasmid tig00002623, complete sequence	23046-23086	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027436	Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence	37175-37215	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027436	Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence	75204-75244	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027436	Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence	1945-1985	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027436	Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence	32978-33018	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027436	Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence	66857-66897	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP010830	Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence	80182-80222	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP010830	Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence	94952-94992	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP010830	Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence	103565-103605	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP010830	Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence	113390-113430	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP010830	Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence	124703-124743	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_018654	Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence	14254-14294	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027456	Escherichia coli strain 2014C-4423 plasmid unnamed2, complete sequence	25486-25526	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027456	Escherichia coli strain 2014C-4423 plasmid unnamed2, complete sequence	35838-35878	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_AP018810	Escherichia coli strain E2865 plasmid pE2865-2, complete sequence	12349-12389	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012377	Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence	71397-71437	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034793	Escherichia coli strain 2009C-3378 plasmid p2009C-3378, complete sequence	54541-54581	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	105068-105108	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	114666-114706	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	172700-172740	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024265	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed2, complete sequence	50247-50287	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024265	Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed2, complete sequence	135246-135286	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP022914	Escherichia coli O6:H16 strain 2011EL-1370-2 plasmid unnamed2, complete sequence	98132-98172	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027324	Escherichia coli strain 2013C-3033 plasmid unnamed, complete sequence	116300-116340	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP023530	Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence	2855-2895	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_032099	Shigella dysenteriae 1 strain 92-9000 plasmid p92-9000, complete sequence	108953-108993	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037946	Escherichia coli strain CFSAN027346 plasmid pCFSAN027346-1, complete sequence	26648-26688	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037946	Escherichia coli strain CFSAN027346 plasmid pCFSAN027346-1, complete sequence	61014-61054	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037946	Escherichia coli strain CFSAN027346 plasmid pCFSAN027346-1, complete sequence	84771-84811	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027364	Escherichia coli strain 88-3001 plasmid unnamed, complete sequence	33493-33533	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027364	Escherichia coli strain 88-3001 plasmid unnamed, complete sequence	42154-42194	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP025908	Escherichia coli strain 204576 plasmid p204576_146, complete sequence	73585-73625	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP025890	Escherichia coli strain 503046 plasmid p503046_80, complete sequence	42809-42849	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027446	Escherichia coli strain 2013C-3492 plasmid unnamed, complete sequence	63812-63852	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027446	Escherichia coli strain 2013C-3492 plasmid unnamed, complete sequence	72474-72514	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027339	Escherichia coli strain 2014C-3051 plasmid unnamed, complete sequence	28479-28519	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027339	Escherichia coli strain 2014C-3051 plasmid unnamed, complete sequence	81329-81369	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027339	Escherichia coli strain 2014C-3051 plasmid unnamed, complete sequence	75325-75365	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024238	Escherichia coli O15:H11 strain 90-9272 plasmid unnamed	222378-222418	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024238	Escherichia coli O15:H11 strain 90-9272 plasmid unnamed	240530-240570	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024238	Escherichia coli O15:H11 strain 90-9272 plasmid unnamed	245453-245493	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024237	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed5, complete sequence	119833-119873	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_013507	Escherichia coli ETEC H10407 plasmid pEntH10407, complete sequence	20978-21018	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP034937	Escherichia coli strain PNUSAE013304 plasmid p2018C-3602, complete sequence	70375-70415	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP011417	Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence	74070-74110	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP011417	Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence	227228-227268	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP011417	Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence	231021-231061	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP011417	Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence	51512-51552	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP011417	Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence	94460-94500	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP011417	Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence	269743-269783	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP013028	Escherichia coli strain 2012C-4227 plasmid unnamed1, complete sequence	53263-53303	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP013028	Escherichia coli strain 2012C-4227 plasmid unnamed1, complete sequence	61925-61965	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024268	Escherichia coli O6:H16 strain F6699 plasmid unnamed2	80666-80706	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046285	Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence	4633-4673	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046285	Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence	14458-14498	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046285	Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence	24302-24342	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046285	Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence	206706-206746	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046285	Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence	19855-19895	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046285	Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence	39073-39113	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP000039	Shigella sonnei Ss046 plasmid pSS_046, complete sequence	145039-145079	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP000039	Shigella sonnei Ss046 plasmid pSS_046, complete sequence	156352-156392	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP000039	Shigella sonnei Ss046 plasmid pSS_046, complete sequence	166177-166217	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP000039	Shigella sonnei Ss046 plasmid pSS_046, complete sequence	174790-174830	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP000039	Shigella sonnei Ss046 plasmid pSS_046, complete sequence	189560-189600	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP041001	Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence	59832-59872	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027386	Escherichia coli strain 2014C-3057 plasmid unnamed	21032-21072	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027386	Escherichia coli strain 2014C-3057 plasmid unnamed	44790-44830	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027354	Escherichia coli strain 2012C-4606 plasmid unnamed2	10952-10992	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027318	Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence	32997-33037	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027318	Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence	78743-78783	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027318	Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence	24644-24684	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027318	Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence	43349-43389	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP007038	Shigella flexneri G1663 plasmid pG1663, complete sequence	97289-97329	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP007038	Shigella flexneri G1663 plasmid pG1663, complete sequence	87544-87584	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP007038	Shigella flexneri G1663 plasmid pG1663, complete sequence	195844-195884	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP007038	Shigella flexneri G1663 plasmid pG1663, complete sequence	205444-205484	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024249	Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence	158163-158203	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024249	Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence	88431-88471	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024249	Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence	118240-118280	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024249	Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence	152203-152243	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	94970-95010	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	174373-174413	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	8423-8463	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	85224-85264	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	195981-196021	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	205581-205621	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_013369	Escherichia coli O26:H11 str. 11368 plasmid pO26_1, complete sequence	12349-12389	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_013369	Escherichia coli O26:H11 str. 11368 plasmid pO26_1, complete sequence	68532-68572	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	HE616529	Shigella sonnei 53G plasmid A, complete genome	160744-160784	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	HE616529	Shigella sonnei 53G plasmid A, complete genome	170569-170609	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	HE616529	Shigella sonnei 53G plasmid A, complete genome	47478-47518	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	HE616529	Shigella sonnei 53G plasmid A, complete genome	192652-192692	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP013186	Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence	48529-48569	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP023533	Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence	20728-20768	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028628	Escherichia coli strain 137 plasmid pTA137, complete sequence	43451-43491	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP022052	Escherichia coli O157 strain FDAARGOS_293 plasmid unnamed2, complete sequence	27816-27856	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	158308-158348	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	167792-167832	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	147564-147604	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026879	Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence	21969-22009	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026785	Shigella dysenteriae strain 80-547 plasmid unnamed	76458-76498	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP023646	Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence	446-486	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP023646	Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence	9005-9045	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP023646	Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence	193981-194021	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP023646	Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence	205294-205334	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP023646	Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence	23775-23815	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024262	Escherichia coli strain F5656C1 plasmid unnamed2, complete sequence	48028-48068	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027106	Escherichia coli strain RM14721 plasmid pRM14721, complete sequence	46238-46278	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028124	Escherichia coli O26 str. RM10386 plasmid pRM10386-2, complete sequence	12347-12387	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	193378-193418	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	35317-35357	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	66698-66738	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	76298-76338	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	99522-99562	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	183633-183673	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015844	Escherichia coli O157:H7 strain FRIK2455 plasmid pO157, complete sequence	52352-52392	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP022408	Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence	45051-45091	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP022408	Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence	81253-81293	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP022408	Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence	9655-9695	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP022408	Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence	72906-72946	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034805	Escherichia coli strain 2009C-3554 plasmid p2009C-3554-2, complete sequence	81246-81286	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP012495	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177P_02, complete sequence	26835-26875	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP012496	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177P_01, complete sequence	2100-2140	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP012496	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177P_01, complete sequence	17842-17882	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	60922-60962	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	51177-51217	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	131689-131729	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	160820-160860	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	170369-170409	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	193627-193667	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_019197	Shigella flexneri plasmid pSF5, complete sequence	49451-49491	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_019197	Shigella flexneri plasmid pSF5, complete sequence	59048-59088	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP027641	Escherichia coli strain 2014C-4705 plasmid unnamed, complete sequence	115717-115757	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP027581	Escherichia coli strain 2013C-4282 plasmid unnamed2, complete sequence	7900-7940	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027392	Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence	884-924	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028115	Escherichia coli O26 str. RM8426 plasmid pRM8426, complete sequence	12349-12389	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_010660	Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence	210721-210761	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017252	Escherichia coli strain NADC 5570/86-24/6564 isolate wild type plasmid pO157, complete sequence	43304-43344	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045976	Escherichia coli strain AUSMDU00002545 plasmid pAUSMDU00002545_01, complete sequence	47201-47241	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028111	Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence	38245-38285	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028111	Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence	56942-56982	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028111	Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence	64439-64479	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028111	Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence	2853-2893	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028111	Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence	48595-48635	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	114007-114047	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	20151-20191	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	104261-104301	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	184767-184807	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	216168-216208	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	228485-228525	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_017722	Escherichia coli ETEC H10407 plasmid p666, complete sequence	49853-49893	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025917	Escherichia coli strain 120899 plasmid p120899_146, complete sequence	112838-112878	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	98103-98143	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	6115-6155	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	88361-88401	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	196736-196776	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	206336-206376	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012492	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_01, complete sequence	34507-34547	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012492	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_01, complete sequence	15536-15576	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026830	Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence	12593-12633	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026830	Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence	70283-70323	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026830	Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence	85678-85718	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026830	Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence	123544-123584	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026838	Shigella dysenteriae strain ATCC 9752 plasmid unnamed, complete sequence	13646-13686	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026838	Shigella dysenteriae strain ATCC 9752 plasmid unnamed, complete sequence	89513-89553	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015833	Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence	197634-197674	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018626	Escherichia coli strain FORC_044 plasmid pFORC44_2, complete sequence	69415-69455	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP043016	Escherichia coli strain 388808_gen plasmid unnamed1, complete sequence	50052-50092	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP043023	Escherichia coli strain 399730_gen plasmid unnamed1, complete sequence	9122-9162	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP043012	Escherichia coli strain 388755_gen plasmid unnamed1, complete sequence	91147-91187	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032806	Escherichia coli strain ERL05-0623 plasmid pERL05-0623-1, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_014232	Escherichia coli ETEC 1392/75 plasmid p1081, complete sequence	2812-2852	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP041624	Escherichia coli O157:H7 strain ATCC 43888 plasmid pO157_like, complete sequence	75497-75537	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032798	Escherichia coli strain ERL06-2497 plasmid pERL06-2497-1, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025863	Escherichia coli strain 504237 plasmid p504237_142, complete sequence	16122-16162	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025854	Escherichia coli strain 510016 plasmid p510016_80, complete sequence	71636-71676	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028651	Escherichia coli strain 124 plasmid pTA124, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028653	Escherichia coli strain 123 plasmid pTA123, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028679	Escherichia coli strain 114 plasmid pTA114, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028701	Escherichia coli strain 105 plasmid pTA105, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP013191	Escherichia coli strain FORC_031 plasmid pFORC31.1, complete sequence	45512-45552	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_KT754164	Shigella dysenteriae 1 strain 3099-85 plasmid p3099-85, complete sequence	67823-67863	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028634	Escherichia coli strain 135 plasmid pTA135, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028637	Escherichia coli strain 134 plasmid pTA134, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP010305	Escherichia coli O157:H7 str. SS52 plasmid p0157, complete sequence	59105-59145	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032804	Escherichia coli strain ERL05-1306 plasmid pERL05-1306, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024469	Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence	130411-130451	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026767	Shigella boydii strain 59-248 plasmid unnamed	108433-108473	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026787	Shigella dysenteriae strain NCTC 9718 plasmid unnamed	45231-45271	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP053733	Escherichia coli strain CP55_Sichuan plasmid pCP55-141k, complete sequence	77434-77474	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028640	Escherichia coli strain 133 plasmid pTA133, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028595	Escherichia coli strain 150 plasmid pTA150, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028616	Escherichia coli strain 141 plasmid pTA141, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026789	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence	20179-20219	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026789	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence	100454-100494	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_013010	Escherichia coli O157:H7 str. TW14359 plasmid pO157, complete sequence	75162-75202	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_009786	Escherichia coli O139:H28 str. E24377A plasmid pETEC_80, complete sequence	18125-18165	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032790	Escherichia coli strain NZRM4169 plasmid pNZRM4169, complete sequence	3011-3051	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046677	Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence	69616-69656	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046677	Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence	136872-136912	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046677	Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence	149444-149484	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046677	Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence	224061-224101	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP035367	Escherichia coli O157:H7 strain C1-057 plasmid pC1-057, complete sequence	77884-77924	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026763	Shigella boydii strain NCTC 9850 plasmid unnamed	132658-132698	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012138	Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence	6115-6155	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012138	Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence	88321-88361	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012138	Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence	117445-117485	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012138	Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence	127045-127085	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044160	Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence	18988-19028	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044160	Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence	103462-103502	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044160	Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence	132592-132632	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044160	Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence	142191-142231	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027375	Escherichia coli strain 05-3629 plasmid unnamed2, complete sequence	93505-93545	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037942	Escherichia coli strain CFSAN027350 plasmid pCFSAN027350, complete sequence	38494-38534	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038410	Escherichia coli O157:H7 strain 86-24 plasmid p86-24-1, complete sequence	75520-75560	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038422	Escherichia coli O157:H7 strain 7636 plasmid p7636-1, complete sequence	72892-72932	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP023350	Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence	55729-55769	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP023350	Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence	58987-59027	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024231	Escherichia coli O25:NM strain 2014EL-1343-2 plasmid unnamed3, complete sequence	50500-50540	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_018666	Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence	14362-14402	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP035753	Escherichia coli E110019 plasmid pE110019_65, complete sequence	28484-28524	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038356	Escherichia coli O157:H7 str. F8092B plasmid pF8092B-1, complete sequence	80901-80941	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038371	Escherichia coli O157:H7 strain F6321 plasmid pF6321-1, complete sequence	73380-73420	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038404	Escherichia coli O157:H7 strain BB24-1 plasmid pBB24-1, complete sequence	75994-76034	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038406	Escherichia coli O157:H7 strain ATCC 35150 plasmid pATCC35150-1, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038420	Escherichia coli O157:H7 strain 2-6-2 plasmid pEX262-1, complete sequence	78431-78471	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038429	Escherichia coli O157:H7 strain 611 plasmid p611-1, complete sequence	75531-75571	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038335	Escherichia coli O157:H7 strain N8B7-2 plasmid pN8B7-1, complete sequence	74690-74730	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038348	Escherichia coli O157:H7 strain G5295 plasmid pG5295-1, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038359	Escherichia coli O157:H7 strain F7508 plasmid pF7508-1, complete sequence	75539-75579	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038373	Escherichia coli O157:H7 strain F6294 plasmid pF6294-1, complete sequence	75553-75593	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038382	Escherichia coli O157:H7 strain E32511 plasmid pE32511-1, complete sequence	72296-72336	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP044144	Escherichia coli O157 strain AR-0429 plasmid pAR-0429-2, complete sequence	54134-54174	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012803	Escherichia coli O157:H7 strain WS4202 isolate laboratory strain plasmid pO157-WS4202, complete sequence	75567-75607	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028606	Escherichia coli strain 144 plasmid pTA144, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027356	Escherichia coli strain 2013C-4991 plasmid unnamed1	2067-2107	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027334	Escherichia coli strain 2013C-3277 plasmid unnamed3	88031-88071	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038345	Escherichia coli O157:H7 strain Gim1-1 plasmid pGM11-1, complete sequence	72454-72494	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038293	Escherichia coli O157:H7 strain TB21-1 plasmid pTB21-1, complete sequence	76001-76041	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038312	Escherichia coli O157:H7 strain Show KS 470-1 plasmid pKS470-1, complete sequence	76001-76041	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038327	Escherichia coli O157:H7 strain NE 1169-1 plasmid pNE1169-1, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038343	Escherichia coli O157:H7 strain H2495 plasmid pH2495-1, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038354	Escherichia coli O157:H7 strain F8797 plasmid pF8797-1, complete sequence	71888-71928	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038368	Escherichia coli O157:H7 strain F6667 plasmid pF6667-1, complete sequence	77387-77427	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038379	Escherichia coli O157:H7 strain F1273 plasmid pF1273-1, complete sequence	76006-76046	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038401	Escherichia coli O157:H7 strain DEC4E plasmid pDEC4E-1, complete sequence	72880-72920	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038415	Escherichia coli O157:H7 strain 17B6-2 plasmid p17B6-1, complete sequence	72924-72964	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038426	Escherichia coli O157:H7 strain 2571 plasmid p2571-1, complete sequence	73379-73419	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038286	Escherichia coli O157:H7 strain YB14-1 plasmid pYB14-1, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040306	Escherichia coli strain HB6 plasmid pO157, complete sequence	2996-3036	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040310	Escherichia coli strain 21B8 plasmid pO157, complete sequence	2997-3037	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026796	Shigella boydii strain ATCC BAA-1247 plasmid unnamed	186867-186907	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038291	Escherichia coli O157:H7 strain TX 265-1 plasmid pTX265-1, complete sequence	78451-78491	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038304	Escherichia coli O157:H7 strain SS TX 313-1 plasmid pTX313-1, complete sequence	76013-76053	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038350	Escherichia coli O157:H7 strain F8952 plasmid pF8952-1, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038352	Escherichia coli O157:H7 strain F8798 plasmid pF8798-1, complete sequence	75049-75089	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038362	Escherichia coli O157:H7 strain F7386 plasmid pF7386-1, complete sequence	76294-76334	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038364	Escherichia coli O157:H7 strain F7349 plasmid pF7349-1, complete sequence	75526-75566	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038424	Escherichia coli O157:H7 strain 7409 plasmid p7409-1, complete sequence	79770-79810	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038283	Escherichia coli O157:H7 strain F8492 plasmid pF8492-1, complete sequence	76087-76127	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018253	Escherichia coli strain 9000 plasmid pO157, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_LT985295	Escherichia coli strain 650 genome assembly, plasmid: RCS64_pII	79330-79370	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018242	Escherichia coli strain 319 plasmid pO157, complete sequence	72870-72910	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034809	Escherichia coli strain 08-3914 plasmid p08-3914, complete sequence	31567-31607	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027444	Escherichia coli strain 2013C-3252 plasmid unnamed2, complete sequence	12206-12246	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027444	Escherichia coli strain 2013C-3252 plasmid unnamed2, complete sequence	52007-52047	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040108	Escherichia coli O157:H7 strain MB9-1 plasmid pMB9_1, complete sequence	76028-76068	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP039835	Escherichia coli O157:H7 strain MB41-1 plasmid pMB41_1, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_018662	Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence	62174-62214	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP046526	Escherichia coli strain RM19259 plasmid pRM19259, complete sequence	60439-60479	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027601	Escherichia coli strain 97-3250 plasmid unnamed2	45477-45517	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025841	Escherichia coli strain 214-4 plasmid p214_4_132, complete sequence	35516-35556	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025848	Escherichia coli strain 602354 plasmid p602354_148, complete sequence	75828-75868	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017670	Escherichia coli strain PA20 plasmid pO157, complete sequence	68681-68721	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP006028	Escherichia coli O145:H28 str. RM13514 plasmid pO145-13514, complete sequence	74287-74327	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034795	Escherichia coli strain 06-3462 plasmid p06-3462, complete sequence	35585-35625	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034800	Escherichia coli strain 2009C-4687 plasmid p2009C-4687, complete sequence	44862-44902	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025850	Escherichia coli strain 600468 plasmid p600468_158, complete sequence	74753-74793	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032792	Escherichia coli strain NZRM4165 plasmid pNZRM4165, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP008806	Escherichia coli O157:H7 str. SS17 plasmid p0157, complete sequence	59096-59136	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP008958	Escherichia coli O157:H7 str. EDL933 plasmid unnamed, complete sequence	6037-6077	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034807	Escherichia coli strain 2010C-3347 plasmid p2010C-3347, complete sequence	14630-14670	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040308	Escherichia coli strain F1 E4 plasmid pO157, complete sequence	2996-3036	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040315	Escherichia coli strain MA11 plasmid pO157, complete sequence	2997-3037	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040317	Escherichia coli strain CV261 plasmid pO157, complete sequence	2998-3038	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034385	Escherichia coli O157:H7 strain FRIK804 plasmid pO157, complete sequence	75517-75557	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034802	Escherichia coli strain 2010C-3142 plasmid p2010C-3142, complete sequence	40777-40817	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_019041	Escherichia coli O157:H7 plasmid pO157, complete sequence	40181-40221	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP051000	Escherichia coli O39:NM str. F8704-2 plasmid pF8704-2_3, complete sequence	66904-66944	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024241	Escherichia coli O114:H49 strain 90-9280 plasmid unnamed1	54082-54122	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024241	Escherichia coli O114:H49 strain 90-9280 plasmid unnamed1	57340-57380	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026800	Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence	56214-56254	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026800	Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence	65812-65852	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028597	Escherichia coli strain 149 plasmid pTA149, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_011754	Escherichia coli ED1a plasmid pECOED, complete sequence	11915-11955	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018244	Escherichia coli strain 350 plasmid pO157, complete sequence	72898-72938	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018248	Escherichia coli strain 7784 plasmid pO157, complete sequence	74193-74233	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	130051-130091	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	188084-188124	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	197682-197722	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP025928	Escherichia coli strain 520873 plasmid p520873_80, complete sequence	5479-5519	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP025876	Escherichia coli strain 503458 plasmid p503458_80, complete sequence	35725-35765	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018246	Escherichia coli strain 472 plasmid pO157, complete sequence	74419-74459	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032809	Escherichia coli strain ERL04-3476 plasmid pERL04-3476-1, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027370	Escherichia coli strain 2014C-3307 plasmid unnamed2	80720-80760	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_007607	Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence	65516-65556	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018238	Escherichia coli strain 155 plasmid pO157, complete sequence	71805-71845	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032794	Escherichia coli strain NZRM3614 plasmid pNZRM3614, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_002128	Escherichia coli O157:H7 str. Sakai plasmid pO157, complete sequence	75552-75592	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038495	Escherichia coli O157:H7 strain TT12B plasmid pO157, complete sequence	2996-3036	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP041748	Escherichia coli strain NCCP 15739 plasmid unnamed, complete sequence	12973-13013	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_011350	Escherichia coli O157:H7 str. EC4115 plasmid pO157, complete sequence	59105-59145	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	LN908840	Escherichia coli plasmid pCss_E1373	80882-80922	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	LN908840	Escherichia coli plasmid pCss_E1373	143785-143825	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027556	Escherichia coli strain 2013C-3513 plasmid unnamed2	12527-12567	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027556	Escherichia coli strain 2013C-3513 plasmid unnamed2	52336-52376	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018251	Escherichia coli strain 10671 plasmid pO157, complete sequence	73145-73185	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017439	Escherichia coli O157:H7 strain 2159 plasmid pO157, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028694	Escherichia coli strain 108 plasmid pTA108, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP010239	Escherichia coli strain S50 plasmid A, complete sequence	27126-27166	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP029980	Escherichia coli strain 99-3165 plasmid unnamed2, complete sequence	14543-14583	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP025574	Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence	42696-42736	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017441	Escherichia coli O157:H7 strain 3384 plasmid pO157, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017445	Escherichia coli O157:H7 strain 8368 plasmid pO157, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_022899	Shigella dysenteriae 1617 plasmid pSLG231, complete sequence	89948-89988	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP041512	Shigella boydii strain KCCM 41690 plasmid unnamed, complete sequence	9224-9264	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017443	Escherichia coli O157:H7 strain 4276 plasmid pO157, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017435	Escherichia coli O157:H7 strain 1130 plasmid pO157, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040571	Escherichia coli O157:H7 strain ECP17-1298 plasmid pCFSAN059541, complete sequence	18821-18861	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP022087	Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence	43662-43702	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017447	Escherichia coli O157:H7 strain 9234 plasmid pO157, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028602	Escherichia coli strain 147 plasmid pTA147, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028643	Escherichia coli strain 132 plasmid pTA132, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028619	Escherichia coli strain 140 plasmid pTA140, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028658	Escherichia coli strain 121 plasmid pTA121, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038301	Escherichia coli O157:H7 strain SS TX 754-1 plasmid pTX754-1, complete sequence	74684-74724	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038318	Escherichia coli O157:H7 strain NE92 plasmid pNE92-1, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028655	Escherichia coli strain 122 plasmid pTA122, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028684	Escherichia coli strain 112 plasmid pTA112, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028682	Escherichia coli strain 113 plasmid pTA113, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP017437	Escherichia coli O157:H7 strain 2149 plasmid pO157, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP016626	Escherichia coli O157:H7 strain FRIK944 plasmid p0157, complete sequence	62137-62177	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP043020	Escherichia coli strain 397404_gen plasmid unnamed1, complete sequence	50056-50096	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_017907	Escherichia coli Xuzhou21 plasmid pO157, complete sequence	75554-75594	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_AP018692	Escherichia coli O157:H7 str. Sakai strain SAKAI (EHEC) substr. RIMD 0509952 plasmid pO157, complete sequence	75712-75752	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_022743	Escherichia coli plasmid pHUSEC2011-2, complete sequence	57595-57635	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028692	Escherichia coli strain 109 plasmid pTA109, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028686	Escherichia coli strain 111 plasmid pTA111, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028689	Escherichia coli strain 110 plasmid pTA110, complete sequence	3009-3049	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP027676	Escherichia coli strain 88-3510 plasmid unnamed	42203-42243	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP027676	Escherichia coli strain 88-3510 plasmid unnamed	50861-50901	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP035546	Escherichia coli strain FSIS11705876 plasmid pO157, complete sequence	74969-75009	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP023062	Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence	46539-46579	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020343	Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence	6133-6173	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020343	Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence	88338-88378	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020343	Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence	117469-117509	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP020343	Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence	127069-127109	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015022	Escherichia coli strain SRCC 1675 plasmid pSRCC 1675, complete sequence	37717-37757	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028664	Escherichia coli strain 119 plasmid pTA118, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028667	Escherichia coli strain 118 plasmid pTA118, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031920	Escherichia coli O145:NM strain FWSEC0002 plasmid unnamed9, complete sequence	62734-62774	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP023552	Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence	38726-38766	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028622	Escherichia coli strain 139 plasmid pTA139, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028625	Escherichia coli strain 138 plasmid pTA138, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028676	Escherichia coli strain 115 plasmid pTA115, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028673	Escherichia coli strain 116 plasmid pTA116, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	LT174529	Escherichia coli plasmid E873p3, strain E873	58071-58111	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028631	Escherichia coli strain 136 plasmid pTA136, complete sequence	3008-3048	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_KY706108	Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence	51726-51766	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028599	Escherichia coli strain 148 plasmid pTA148, complete sequence	3010-3050	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP012493	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176G_02, complete sequence	41180-41220	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031914	Escherichia coli O157:H7 strain FWSEC0004 plasmid unnamed13, complete sequence	2998-3038	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038289	Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-1, complete sequence	75995-76035	0	1.0
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP028612	Escherichia coli strain 142 plasmid pTA142, complete sequence	3009-3049	0	1.0
NC_004337_1	1.1\|64574\|54\|NC_004337\|CRISPRCasFinder	64574-64627	54	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	165411-165464	1	0.981
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026783	Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence	92009-92049	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026783	Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence	37216-37256	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP026844	Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence	212638-212678	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	198869-198909	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	100924-100964	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	88859-88899	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	116483-116523	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026876	Shigella boydii strain ATCC 35964 plasmid unnamed, complete sequence	123202-123242	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027460	Escherichia coli strain 90-3040 plasmid unnamed, complete sequence	21127-21167	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027350	Escherichia coli strain 2014C-3655 plasmid unnamed	748-788	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027350	Escherichia coli strain 2014C-3655 plasmid unnamed	91763-91803	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026775	Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence	6196-6236	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026781	Shigella dysenteriae strain 53-3937 plasmid unnamed	52014-52054	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	7653-7693	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	221144-221184	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027446	Escherichia coli strain 2013C-3492 plasmid unnamed, complete sequence	50134-50174	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP011417	Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence	257183-257223	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP007038	Shigella flexneri G1663 plasmid pG1663, complete sequence	6891-6931	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	119625-119665	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	8319-8359	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026779	Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence	177725-177765	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026879	Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence	64914-64954	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026785	Shigella dysenteriae strain 80-547 plasmid unnamed	104387-104427	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026785	Shigella dysenteriae strain 80-547 plasmid unnamed	49597-49637	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_019197	Shigella flexneri plasmid pSF5, complete sequence	88729-88769	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024469	Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence	102493-102533	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024469	Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence	157272-157312	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026767	Shigella boydii strain 59-248 plasmid unnamed	70932-70972	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026787	Shigella dysenteriae strain NCTC 9718 plasmid unnamed	105564-105604	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026787	Shigella dysenteriae strain NCTC 9718 plasmid unnamed	72865-72905	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026787	Shigella dysenteriae strain NCTC 9718 plasmid unnamed	95051-95091	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP026789	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence	110053-110093	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP037942	Escherichia coli strain CFSAN027350 plasmid pCFSAN027350, complete sequence	40089-40129	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP024231	Escherichia coli O25:NM strain 2014EL-1343-2 plasmid unnamed3, complete sequence	39669-39709	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027334	Escherichia coli strain 2013C-3277 plasmid unnamed3	89626-89666	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	81605-81645	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_007607	Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence	37334-37374	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_007607	Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence	92378-92418	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_022899	Shigella dysenteriae 1617 plasmid pSLG231, complete sequence	36292-36332	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_022899	Shigella dysenteriae 1617 plasmid pSLG231, complete sequence	89740-89780	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NC_022899	Shigella dysenteriae 1617 plasmid pSLG231, complete sequence	63039-63079	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP027676	Escherichia coli strain 88-3510 plasmid unnamed	64524-64564	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP030765	Escherichia coli strain 2017C-4109 plasmid p2017C-4109, complete sequence	47152-47192	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034796	Escherichia coli strain 08-3918 plasmid p08-3918-1, complete sequence	81981-82021	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038792	Escherichia coli strain PF9285 plasmid pDW54_1, complete sequence	52305-52345	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040573	Escherichia coli O157:H7 strain ECP17-46 plasmid pCFSAN059540, complete sequence	18819-18859	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032802	Escherichia coli strain ERL06-2442 plasmid pERL06-2442, complete sequence	3009-3049	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032796	Escherichia coli strain ERL06-2503 plasmid pERL06-2503, complete sequence	3009-3049	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038418	Escherichia coli O157:H7 strain 3-5-1 plasmid pGM351-1, complete sequence	74565-74605	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP018240	Escherichia coli strain 272 plasmid pO157, complete sequence	74548-74588	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038320	Escherichia coli O157:H7 strain NE122 plasmid pNE122-1, complete sequence	75722-75762	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP038341	Escherichia coli O157:H7 strain H6437 plasmid pH6437-1, complete sequence	73228-73268	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP040312	Escherichia coli strain F3398 plasmid pO157, complete sequence	2996-3036	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015854	Escherichia coli strain ATCC 43889 plasmid, complete genome	27678-27718	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP032812	Escherichia coli strain ERL03-1416 plasmid pERL03-1416-1, complete sequence	3009-3049	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP015021	Escherichia coli strain 28RC1 plasmid p28RC1, complete sequence	76335-76375	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025844	Escherichia coli strain 720632 plasmid p720632_94, complete sequence	27037-27077	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025844	Escherichia coli strain 720632 plasmid p720632_94, complete sequence	59131-59171	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025846	Escherichia coli strain 720632 plasmid p720632_86, complete sequence	75747-75787	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025846	Escherichia coli strain 720632 plasmid p720632_86, complete sequence	72980-73020	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP034959	Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence	64896-64936	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031232	Escherichia coli strain Es_ST410_NW1_NDM_09_2017 plasmid pEsST410_NW_2, complete sequence	50181-50221	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_AP014804	Escherichia coli O119:H6 strain EC404/03 plasmid pEC404/03-1, complete sequence	40308-40348	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP031654	Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence	63697-63737	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP029103	Escherichia coli strain AR437 plasmid unnamed1, complete sequence	38650-38690	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP023896	Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence	38005-38045	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP027028	Shigella dysenteriae strain E670/74 plasmid unnamed, complete sequence	112119-112159	1	0.976
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	KY612498	Escherichia coli plasmid pEC4103, complete sequence	4191-4231	2	0.951
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	KY612499	Escherichia coli plasmid pEC5106, complete sequence	5817-5857	2	0.951
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	KY612500	Escherichia coli plasmid pEC6413, complete sequence	9753-9793	2	0.951
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046677	Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence	243338-243378	4	0.902
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	CP046677	Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence	122521-122561	7	0.829
NC_004337_4	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	NZ_CP025846	Escherichia coli strain 720632 plasmid p720632_86, complete sequence	59093-59133	8	0.805
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
NC_004337_1	1.1\|64574\|54\|NC_004337\|CRISPRCasFinder	64574-64627	54	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	72431-72484	12	0.778
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
NC_004337_3	3.1\|2363993\|49\|NC_004337\|CRISPRCasFinder	2363993-2364041	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031904 (Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

2. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP051632 (Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

3. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP051632 (Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

4. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP051632 (Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

5. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP051632 (Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

6. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045829 (Escherichia coli strain AUSMDU00014361 plasmid pAUSMDU00014361_02, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

7. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025921 (Escherichia coli strain 103605 plasmid p103605_146, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

8. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025911 (Escherichia coli strain 204446 plasmid p204446_146, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

9. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045864 (Escherichia coli O157:H7 strain ATCC 43890 plasmid p1CFSAN076619, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

10. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026783 (Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

11. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015246 (Escherichia coli O91 str. RM7190 plasmid pRM7190-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

12. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015246 (Escherichia coli O91 str. RM7190 plasmid pRM7190-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

13. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015816 (Escherichia coli O157:H7 strain JEONG-1266 plasmid p0157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

14. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028608 (Escherichia coli strain 143 plasmid pTA143, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

15. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_011752 (Escherichia coli 55989 plasmid 55989p, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

16. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024272 (Escherichia coli strain F8111-1SC3 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

17. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024272 (Escherichia coli strain F8111-1SC3 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

18. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031907 (Escherichia coli O91:H21 strain FWSEC0008 plasmid unnamed17, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

19. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031907 (Escherichia coli O91:H21 strain FWSEC0008 plasmid unnamed17, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

20. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP026798 (Shigella boydii strain NCTC 9353 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

21. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP026844 (Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

22. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP026844 (Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

23. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP023347 (Escherichia coli strain ETEC-2265 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

24. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024227 (Escherichia coli O169:H41 strain 2014EL-1345-2 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

25. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024227 (Escherichia coli O169:H41 strain 2014EL-1345-2 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

26. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031911 (Escherichia coli O121:H19 strain FWSEC0006 plasmid unnamed15, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

27. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031911 (Escherichia coli O121:H19 strain FWSEC0006 plasmid unnamed15, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

28. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031911 (Escherichia coli O121:H19 strain FWSEC0006 plasmid unnamed15, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

29. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031923 (Escherichia coli O26:H11 strain FWSEC0001 plasmid unnamed6, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

30. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP054891 (Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

31. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP054891 (Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

32. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP054891 (Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

33. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP054891 (Shigella flexneri strain FDAARGOS_713 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

34. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP042949 (Escherichia coli strain ATCC 51435 plasmid pB2F1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

35. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP042949 (Escherichia coli strain ATCC 51435 plasmid pB2F1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

36. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP042952 (Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

37. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026813 (Shigella boydii strain 83-578 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

38. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017848 (Escherichia coli strain FMU073332 plasmid pEcoFMU07332d sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

39. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP022688 (Escherichia coli strain CDC#03-98 plasmid p0157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

40. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

41. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

42. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

43. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

44. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

45. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

46. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

47. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

48. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

49. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

50. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

51. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

52. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

53. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

54. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

55. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

56. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026099 (Shigella flexneri strain FDAARGOS_74 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

57. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026099 (Shigella flexneri strain FDAARGOS_74 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

58. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026099 (Shigella flexneri strain FDAARGOS_74 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

59. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026099 (Shigella flexneri strain FDAARGOS_74 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

60. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024277 (Escherichia coli O6:H16 strain M9682-C1 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

61. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026826 (Shigella dysenteriae strain ATCC 12021 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

62. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026826 (Shigella dysenteriae strain ATCC 12021 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

63. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026826 (Shigella dysenteriae strain ATCC 12021 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

64. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026826 (Shigella dysenteriae strain ATCC 12021 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

65. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026826 (Shigella dysenteriae strain ATCC 12021 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

66. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

67. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

68. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

69. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

70. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

71. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

72. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

73. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

74. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

75. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

76. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

77. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

78. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

79. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

80. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

81. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

82. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

83. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

84. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

85. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

86. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026791 (Shigella flexneri strain 61-4982 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

87. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026791 (Shigella flexneri strain 61-4982 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

88. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026791 (Shigella flexneri strain 61-4982 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

89. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

90. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

91. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

92. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

93. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

94. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

95. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024248 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

96. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024248 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

97. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024274 (Escherichia coli strain F9792 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

98. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024274 (Escherichia coli strain F9792 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

99. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026876 (Shigella boydii strain ATCC 35964 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

100. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026876 (Shigella boydii strain ATCC 35964 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

101. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026876 (Shigella boydii strain ATCC 35964 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

102. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026837 (Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

103. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026837 (Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

104. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026837 (Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

105. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032524 (Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

106. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032524 (Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

107. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032524 (Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

108. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032524 (Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

109. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032524 (Shigella sonnei strain AR_0030 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

110. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015847 (Escherichia coli O157:H7 strain FRIK2069 plasmid p0157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

111. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027326 (Escherichia coli strain 2013C-4830 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

112. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027326 (Escherichia coli strain 2013C-4830 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

113. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027220 (Escherichia coli strain 2015C-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

114. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027220 (Escherichia coli strain 2015C-3163 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

115. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_019000 (Escherichia coli plasmid pHUSEC41-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

116. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP009053 (Escherichia coli NCCP15648 plasmid p15648-3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

117. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044146 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

118. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027460 (Escherichia coli strain 90-3040 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

119. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027460 (Escherichia coli strain 90-3040 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

120. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027350 (Escherichia coli strain 2014C-3655 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

121. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027350 (Escherichia coli strain 2014C-3655 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

122. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027350 (Escherichia coli strain 2014C-3655 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

123. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP019696 (Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

124. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP019696 (Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

125. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP019696 (Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

126. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP019696 (Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

127. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP019696 (Shigella sonnei strain 75/02 plasmid pInv_75_02_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

128. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044139 (Escherichia coli O157 strain AR-0430 plasmid pAR-0430-3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

129. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017250 (Escherichia coli strain NADC 5570/86-24/6565 isolate mutant plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

130. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027547 (Escherichia coli strain 2013C-4187 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

131. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027547 (Escherichia coli strain 2013C-4187 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

132. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027547 (Escherichia coli strain 2013C-4187 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

133. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

134. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

135. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

136. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

137. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

138. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

139. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038332 (Escherichia coli O157:H7 strain NE 1092-2 plasmid pNE1092-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

140. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038308 (Escherichia coli O157:H7 strain SS NE 1040-1 plasmid pNE1040-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

141. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038314 (Escherichia coli O157:H7 strain OK1 plasmid pOK1-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

142. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026775 (Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

143. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026775 (Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

144. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026781 (Shigella dysenteriae strain 53-3937 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

145. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038323 (Escherichia coli O157:H7 strain NE1127 plasmid pNE1127-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

146. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027391 (Escherichia coli strain 2015C-4944 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

147. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027391 (Escherichia coli strain 2015C-4944 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

148. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027391 (Escherichia coli strain 2015C-4944 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

149. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

150. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

151. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

152. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

153. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

154. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

155. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

156. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

157. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

158. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

159. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

160. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

161. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP053752 (Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

162. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP053752 (Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

163. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP053752 (Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

164. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP053752 (Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

165. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP053752 (Shigella sonnei strain 506 plasmid pMHMC-001, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

166. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_012487 (Escherichia coli plasmid pO26-Vir, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

167. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to AP014654 (Escherichia coli O169:H41 plasmid pEntYN10 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

168. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to AP014654 (Escherichia coli O169:H41 plasmid pEntYN10 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

169. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

170. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

171. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

172. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

173. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

174. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

175. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_022333 (Escherichia coli plasmid pCss165Kan DNA, complete genome, strain: 4266 delta cssB::Km) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

176. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP021680 (Escherichia coli strain AR_0162 plasmid tig00002623, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

177. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027436 (Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

178. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027436 (Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

179. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027436 (Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

180. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027436 (Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

181. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027436 (Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

182. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP010830 (Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

183. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP010830 (Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

184. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP010830 (Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

185. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP010830 (Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

186. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP010830 (Shigella sonnei strain FORC_011 plasmid pFORC11.1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

187. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_018654 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

188. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027456 (Escherichia coli strain 2014C-4423 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

189. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027456 (Escherichia coli strain 2014C-4423 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

190. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_AP018810 (Escherichia coli strain E2865 plasmid pE2865-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

191. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012377 (Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

192. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034793 (Escherichia coli strain 2009C-3378 plasmid p2009C-3378, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

193. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

194. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

195. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

196. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024265 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

197. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024265 (Escherichia coli O169:H41 strain F6326-C1 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

198. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP022914 (Escherichia coli O6:H16 strain 2011EL-1370-2 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

199. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027324 (Escherichia coli strain 2013C-3033 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

200. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP023530 (Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

201. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_032099 (Shigella dysenteriae 1 strain 92-9000 plasmid p92-9000, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

202. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037946 (Escherichia coli strain CFSAN027346 plasmid pCFSAN027346-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

203. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037946 (Escherichia coli strain CFSAN027346 plasmid pCFSAN027346-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

204. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037946 (Escherichia coli strain CFSAN027346 plasmid pCFSAN027346-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

205. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027364 (Escherichia coli strain 88-3001 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

206. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027364 (Escherichia coli strain 88-3001 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

207. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP025908 (Escherichia coli strain 204576 plasmid p204576_146, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

208. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP025890 (Escherichia coli strain 503046 plasmid p503046_80, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

209. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027446 (Escherichia coli strain 2013C-3492 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

210. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027446 (Escherichia coli strain 2013C-3492 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

211. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027339 (Escherichia coli strain 2014C-3051 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

212. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027339 (Escherichia coli strain 2014C-3051 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

213. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027339 (Escherichia coli strain 2014C-3051 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

214. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024238 (Escherichia coli O15:H11 strain 90-9272 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

215. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024238 (Escherichia coli O15:H11 strain 90-9272 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

216. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024238 (Escherichia coli O15:H11 strain 90-9272 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

217. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024237 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

218. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_013507 (Escherichia coli ETEC H10407 plasmid pEntH10407, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

219. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP034937 (Escherichia coli strain PNUSAE013304 plasmid p2018C-3602, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

220. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP011417 (Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

221. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP011417 (Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

222. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP011417 (Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

223. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP011417 (Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

224. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP011417 (Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

225. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP011417 (Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

226. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP013028 (Escherichia coli strain 2012C-4227 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

227. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP013028 (Escherichia coli strain 2012C-4227 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

228. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024268 (Escherichia coli O6:H16 strain F6699 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

229. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046285 (Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

230. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046285 (Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

231. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046285 (Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

232. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046285 (Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

233. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046285 (Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

234. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046285 (Shigella sonnei strain FDAARGOS_715 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

235. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP000039 (Shigella sonnei Ss046 plasmid pSS_046, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

236. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP000039 (Shigella sonnei Ss046 plasmid pSS_046, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

237. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP000039 (Shigella sonnei Ss046 plasmid pSS_046, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

238. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP000039 (Shigella sonnei Ss046 plasmid pSS_046, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

239. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP000039 (Shigella sonnei Ss046 plasmid pSS_046, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

240. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP041001 (Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

241. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027386 (Escherichia coli strain 2014C-3057 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

242. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027386 (Escherichia coli strain 2014C-3057 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

243. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027354 (Escherichia coli strain 2012C-4606 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

244. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027318 (Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

245. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027318 (Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

246. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027318 (Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

247. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027318 (Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

248. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP007038 (Shigella flexneri G1663 plasmid pG1663, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

249. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP007038 (Shigella flexneri G1663 plasmid pG1663, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

250. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP007038 (Shigella flexneri G1663 plasmid pG1663, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

251. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP007038 (Shigella flexneri G1663 plasmid pG1663, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

252. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024249 (Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

253. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024249 (Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

254. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024249 (Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

255. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024249 (Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

256. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

257. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

258. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

259. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

260. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

261. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

262. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_013369 (Escherichia coli O26:H11 str. 11368 plasmid pO26_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

263. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_013369 (Escherichia coli O26:H11 str. 11368 plasmid pO26_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

264. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to HE616529 (Shigella sonnei 53G plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

265. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to HE616529 (Shigella sonnei 53G plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

266. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to HE616529 (Shigella sonnei 53G plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

267. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to HE616529 (Shigella sonnei 53G plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

268. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP013186 (Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

269. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP023533 (Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

270. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028628 (Escherichia coli strain 137 plasmid pTA137, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

271. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP022052 (Escherichia coli O157 strain FDAARGOS_293 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

272. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

273. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

274. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

275. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026879 (Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

276. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026785 (Shigella dysenteriae strain 80-547 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

277. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP023646 (Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

278. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP023646 (Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

279. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP023646 (Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

280. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP023646 (Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

281. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP023646 (Shigella sonnei strain CFSAN030807 plasmid pCFSAN030807_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

282. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024262 (Escherichia coli strain F5656C1 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

283. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027106 (Escherichia coli strain RM14721 plasmid pRM14721, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

284. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028124 (Escherichia coli O26 str. RM10386 plasmid pRM10386-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

285. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

286. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

287. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

288. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

289. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

290. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

291. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015844 (Escherichia coli O157:H7 strain FRIK2455 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

292. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP022408 (Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

293. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP022408 (Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

294. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP022408 (Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

295. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP022408 (Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

296. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034805 (Escherichia coli strain 2009C-3554 plasmid p2009C-3554-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

297. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP012495 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177P_02, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

298. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP012496 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177P_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

299. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP012496 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177P_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

300. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

301. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

302. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

303. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

304. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

305. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

306. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_019197 (Shigella flexneri plasmid pSF5, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

307. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_019197 (Shigella flexneri plasmid pSF5, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

308. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP027641 (Escherichia coli strain 2014C-4705 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

309. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP027581 (Escherichia coli strain 2013C-4282 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

310. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027392 (Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

311. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028115 (Escherichia coli O26 str. RM8426 plasmid pRM8426, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

312. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_010660 (Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

313. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017252 (Escherichia coli strain NADC 5570/86-24/6564 isolate wild type plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

314. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045976 (Escherichia coli strain AUSMDU00002545 plasmid pAUSMDU00002545_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

315. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028111 (Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

316. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028111 (Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

317. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028111 (Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

318. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028111 (Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

319. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028111 (Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

320. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

321. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

322. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

323. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

324. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

325. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

326. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_017722 (Escherichia coli ETEC H10407 plasmid p666, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

327. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025917 (Escherichia coli strain 120899 plasmid p120899_146, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

328. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

329. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

330. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

331. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

332. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

333. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012492 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

334. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012492 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_01, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

335. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026830 (Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

336. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026830 (Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

337. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026830 (Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

338. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026830 (Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

339. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026838 (Shigella dysenteriae strain ATCC 9752 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

340. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026838 (Shigella dysenteriae strain ATCC 9752 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

341. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

342. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018626 (Escherichia coli strain FORC_044 plasmid pFORC44_2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

343. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP043016 (Escherichia coli strain 388808_gen plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

344. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP043023 (Escherichia coli strain 399730_gen plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

345. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP043012 (Escherichia coli strain 388755_gen plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

346. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032806 (Escherichia coli strain ERL05-0623 plasmid pERL05-0623-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

347. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_014232 (Escherichia coli ETEC 1392/75 plasmid p1081, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

348. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP041624 (Escherichia coli O157:H7 strain ATCC 43888 plasmid pO157_like, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

349. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032798 (Escherichia coli strain ERL06-2497 plasmid pERL06-2497-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

350. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025863 (Escherichia coli strain 504237 plasmid p504237_142, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

351. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025854 (Escherichia coli strain 510016 plasmid p510016_80, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

352. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028651 (Escherichia coli strain 124 plasmid pTA124, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

353. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028653 (Escherichia coli strain 123 plasmid pTA123, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

354. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028679 (Escherichia coli strain 114 plasmid pTA114, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

355. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028701 (Escherichia coli strain 105 plasmid pTA105, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

356. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP013191 (Escherichia coli strain FORC_031 plasmid pFORC31.1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

357. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_KT754164 (Shigella dysenteriae 1 strain 3099-85 plasmid p3099-85, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

358. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028634 (Escherichia coli strain 135 plasmid pTA135, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

359. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028637 (Escherichia coli strain 134 plasmid pTA134, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

360. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP010305 (Escherichia coli O157:H7 str. SS52 plasmid p0157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

361. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032804 (Escherichia coli strain ERL05-1306 plasmid pERL05-1306, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

362. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024469 (Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

363. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026767 (Shigella boydii strain 59-248 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

364. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026787 (Shigella dysenteriae strain NCTC 9718 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

365. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP053733 (Escherichia coli strain CP55_Sichuan plasmid pCP55-141k, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

366. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028640 (Escherichia coli strain 133 plasmid pTA133, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

367. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028595 (Escherichia coli strain 150 plasmid pTA150, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

368. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028616 (Escherichia coli strain 141 plasmid pTA141, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

369. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026789 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

370. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026789 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

371. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_013010 (Escherichia coli O157:H7 str. TW14359 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

372. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_009786 (Escherichia coli O139:H28 str. E24377A plasmid pETEC_80, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

373. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032790 (Escherichia coli strain NZRM4169 plasmid pNZRM4169, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

374. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046677 (Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

375. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046677 (Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

376. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046677 (Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

377. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046677 (Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

378. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP035367 (Escherichia coli O157:H7 strain C1-057 plasmid pC1-057, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

379. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026763 (Shigella boydii strain NCTC 9850 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

380. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012138 (Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

381. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012138 (Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

382. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012138 (Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

383. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012138 (Shigella flexneri 2a strain 981 plasmid 981p1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

384. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044160 (Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

385. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044160 (Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

386. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044160 (Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

387. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044160 (Shigella flexneri strain AR-0423 plasmid pAR-0423-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

388. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027375 (Escherichia coli strain 05-3629 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

389. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037942 (Escherichia coli strain CFSAN027350 plasmid pCFSAN027350, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

390. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038410 (Escherichia coli O157:H7 strain 86-24 plasmid p86-24-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

391. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038422 (Escherichia coli O157:H7 strain 7636 plasmid p7636-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

392. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP023350 (Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

393. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP023350 (Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

394. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024231 (Escherichia coli O25:NM strain 2014EL-1343-2 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

395. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_018666 (Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

396. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP035753 (Escherichia coli E110019 plasmid pE110019_65, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

397. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038356 (Escherichia coli O157:H7 str. F8092B plasmid pF8092B-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

398. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038371 (Escherichia coli O157:H7 strain F6321 plasmid pF6321-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

399. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038404 (Escherichia coli O157:H7 strain BB24-1 plasmid pBB24-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

400. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038406 (Escherichia coli O157:H7 strain ATCC 35150 plasmid pATCC35150-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

401. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038420 (Escherichia coli O157:H7 strain 2-6-2 plasmid pEX262-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

402. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038429 (Escherichia coli O157:H7 strain 611 plasmid p611-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

403. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038335 (Escherichia coli O157:H7 strain N8B7-2 plasmid pN8B7-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

404. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038348 (Escherichia coli O157:H7 strain G5295 plasmid pG5295-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

405. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038359 (Escherichia coli O157:H7 strain F7508 plasmid pF7508-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

406. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038373 (Escherichia coli O157:H7 strain F6294 plasmid pF6294-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

407. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038382 (Escherichia coli O157:H7 strain E32511 plasmid pE32511-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

408. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP044144 (Escherichia coli O157 strain AR-0429 plasmid pAR-0429-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

409. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012803 (Escherichia coli O157:H7 strain WS4202 isolate laboratory strain plasmid pO157-WS4202, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

410. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028606 (Escherichia coli strain 144 plasmid pTA144, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

411. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027356 (Escherichia coli strain 2013C-4991 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

412. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027334 (Escherichia coli strain 2013C-3277 plasmid unnamed3) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

413. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038345 (Escherichia coli O157:H7 strain Gim1-1 plasmid pGM11-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

414. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038293 (Escherichia coli O157:H7 strain TB21-1 plasmid pTB21-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

415. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038312 (Escherichia coli O157:H7 strain Show KS 470-1 plasmid pKS470-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

416. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038327 (Escherichia coli O157:H7 strain NE 1169-1 plasmid pNE1169-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

417. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038343 (Escherichia coli O157:H7 strain H2495 plasmid pH2495-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

418. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038354 (Escherichia coli O157:H7 strain F8797 plasmid pF8797-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

419. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038368 (Escherichia coli O157:H7 strain F6667 plasmid pF6667-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

420. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038379 (Escherichia coli O157:H7 strain F1273 plasmid pF1273-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

421. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038401 (Escherichia coli O157:H7 strain DEC4E plasmid pDEC4E-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

422. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038415 (Escherichia coli O157:H7 strain 17B6-2 plasmid p17B6-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

423. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038426 (Escherichia coli O157:H7 strain 2571 plasmid p2571-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

424. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038286 (Escherichia coli O157:H7 strain YB14-1 plasmid pYB14-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

425. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040306 (Escherichia coli strain HB6 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

426. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040310 (Escherichia coli strain 21B8 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

427. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026796 (Shigella boydii strain ATCC BAA-1247 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

428. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038291 (Escherichia coli O157:H7 strain TX 265-1 plasmid pTX265-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

429. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038304 (Escherichia coli O157:H7 strain SS TX 313-1 plasmid pTX313-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

430. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038350 (Escherichia coli O157:H7 strain F8952 plasmid pF8952-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

431. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038352 (Escherichia coli O157:H7 strain F8798 plasmid pF8798-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

432. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038362 (Escherichia coli O157:H7 strain F7386 plasmid pF7386-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

433. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038364 (Escherichia coli O157:H7 strain F7349 plasmid pF7349-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

434. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038424 (Escherichia coli O157:H7 strain 7409 plasmid p7409-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

435. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038283 (Escherichia coli O157:H7 strain F8492 plasmid pF8492-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

436. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018253 (Escherichia coli strain 9000 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

437. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_LT985295 (Escherichia coli strain 650 genome assembly, plasmid: RCS64_pII) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

438. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018242 (Escherichia coli strain 319 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

439. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034809 (Escherichia coli strain 08-3914 plasmid p08-3914, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

440. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027444 (Escherichia coli strain 2013C-3252 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

441. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027444 (Escherichia coli strain 2013C-3252 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

442. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040108 (Escherichia coli O157:H7 strain MB9-1 plasmid pMB9_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

443. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP039835 (Escherichia coli O157:H7 strain MB41-1 plasmid pMB41_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

444. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_018662 (Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

445. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP046526 (Escherichia coli strain RM19259 plasmid pRM19259, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

446. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027601 (Escherichia coli strain 97-3250 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

447. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025841 (Escherichia coli strain 214-4 plasmid p214_4_132, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

448. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025848 (Escherichia coli strain 602354 plasmid p602354_148, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

449. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017670 (Escherichia coli strain PA20 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

450. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP006028 (Escherichia coli O145:H28 str. RM13514 plasmid pO145-13514, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

451. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034795 (Escherichia coli strain 06-3462 plasmid p06-3462, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

452. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034800 (Escherichia coli strain 2009C-4687 plasmid p2009C-4687, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

453. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025850 (Escherichia coli strain 600468 plasmid p600468_158, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

454. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032792 (Escherichia coli strain NZRM4165 plasmid pNZRM4165, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

455. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP008806 (Escherichia coli O157:H7 str. SS17 plasmid p0157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

456. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP008958 (Escherichia coli O157:H7 str. EDL933 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

457. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034807 (Escherichia coli strain 2010C-3347 plasmid p2010C-3347, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

458. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040308 (Escherichia coli strain F1 E4 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

459. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040315 (Escherichia coli strain MA11 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

460. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040317 (Escherichia coli strain CV261 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

461. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034385 (Escherichia coli O157:H7 strain FRIK804 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

462. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034802 (Escherichia coli strain 2010C-3142 plasmid p2010C-3142, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

463. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_019041 (Escherichia coli O157:H7 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

464. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP051000 (Escherichia coli O39:NM str. F8704-2 plasmid pF8704-2_3, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

465. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024241 (Escherichia coli O114:H49 strain 90-9280 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

466. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024241 (Escherichia coli O114:H49 strain 90-9280 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

467. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026800 (Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

468. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026800 (Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

469. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028597 (Escherichia coli strain 149 plasmid pTA149, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

470. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_011754 (Escherichia coli ED1a plasmid pECOED, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

471. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018244 (Escherichia coli strain 350 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

472. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018248 (Escherichia coli strain 7784 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

473. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

474. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

475. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

476. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP025928 (Escherichia coli strain 520873 plasmid p520873_80, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

477. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP025876 (Escherichia coli strain 503458 plasmid p503458_80, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

478. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018246 (Escherichia coli strain 472 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

479. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032809 (Escherichia coli strain ERL04-3476 plasmid pERL04-3476-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

480. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027370 (Escherichia coli strain 2014C-3307 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

481. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_007607 (Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

482. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018238 (Escherichia coli strain 155 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

483. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032794 (Escherichia coli strain NZRM3614 plasmid pNZRM3614, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

484. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_002128 (Escherichia coli O157:H7 str. Sakai plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

485. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038495 (Escherichia coli O157:H7 strain TT12B plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

486. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP041748 (Escherichia coli strain NCCP 15739 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

487. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_011350 (Escherichia coli O157:H7 str. EC4115 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

488. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to LN908840 (Escherichia coli plasmid pCss_E1373) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

489. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to LN908840 (Escherichia coli plasmid pCss_E1373) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

490. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027556 (Escherichia coli strain 2013C-3513 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

491. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027556 (Escherichia coli strain 2013C-3513 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

492. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018251 (Escherichia coli strain 10671 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

493. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017439 (Escherichia coli O157:H7 strain 2159 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

494. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028694 (Escherichia coli strain 108 plasmid pTA108, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

495. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP010239 (Escherichia coli strain S50 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

496. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP029980 (Escherichia coli strain 99-3165 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

497. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP025574 (Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

498. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017441 (Escherichia coli O157:H7 strain 3384 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

499. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017445 (Escherichia coli O157:H7 strain 8368 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

500. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_022899 (Shigella dysenteriae 1617 plasmid pSLG231, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

501. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP041512 (Shigella boydii strain KCCM 41690 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

502. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017443 (Escherichia coli O157:H7 strain 4276 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

503. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017435 (Escherichia coli O157:H7 strain 1130 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

504. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040571 (Escherichia coli O157:H7 strain ECP17-1298 plasmid pCFSAN059541, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

505. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP022087 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

506. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017447 (Escherichia coli O157:H7 strain 9234 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

507. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028602 (Escherichia coli strain 147 plasmid pTA147, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

508. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028643 (Escherichia coli strain 132 plasmid pTA132, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

509. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028619 (Escherichia coli strain 140 plasmid pTA140, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

510. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028658 (Escherichia coli strain 121 plasmid pTA121, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

511. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038301 (Escherichia coli O157:H7 strain SS TX 754-1 plasmid pTX754-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

512. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038318 (Escherichia coli O157:H7 strain NE92 plasmid pNE92-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

513. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028655 (Escherichia coli strain 122 plasmid pTA122, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

514. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028684 (Escherichia coli strain 112 plasmid pTA112, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

515. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028682 (Escherichia coli strain 113 plasmid pTA113, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

516. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP017437 (Escherichia coli O157:H7 strain 2149 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

517. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP016626 (Escherichia coli O157:H7 strain FRIK944 plasmid p0157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

518. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP043020 (Escherichia coli strain 397404_gen plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

519. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_017907 (Escherichia coli Xuzhou21 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

520. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_AP018692 (Escherichia coli O157:H7 str. Sakai strain SAKAI (EHEC) substr. RIMD 0509952 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

521. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_022743 (Escherichia coli plasmid pHUSEC2011-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

522. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028692 (Escherichia coli strain 109 plasmid pTA109, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

523. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028686 (Escherichia coli strain 111 plasmid pTA111, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

524. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028689 (Escherichia coli strain 110 plasmid pTA110, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

525. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP027676 (Escherichia coli strain 88-3510 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

526. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP027676 (Escherichia coli strain 88-3510 plasmid unnamed) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

527. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP035546 (Escherichia coli strain FSIS11705876 plasmid pO157, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

528. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP023062 (Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

529. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020343 (Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

530. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020343 (Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

531. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020343 (Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

532. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP020343 (Shigella flexneri 1a strain 0439 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

533. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015022 (Escherichia coli strain SRCC 1675 plasmid pSRCC 1675, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

534. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028664 (Escherichia coli strain 119 plasmid pTA118, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

535. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028667 (Escherichia coli strain 118 plasmid pTA118, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

536. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031920 (Escherichia coli O145:NM strain FWSEC0002 plasmid unnamed9, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

537. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP023552 (Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

538. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028622 (Escherichia coli strain 139 plasmid pTA139, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

539. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028625 (Escherichia coli strain 138 plasmid pTA138, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

540. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028676 (Escherichia coli strain 115 plasmid pTA115, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

541. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028673 (Escherichia coli strain 116 plasmid pTA116, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

542. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to LT174529 (Escherichia coli plasmid E873p3, strain E873) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

543. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028631 (Escherichia coli strain 136 plasmid pTA136, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

544. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_KY706108 (Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

545. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028599 (Escherichia coli strain 148 plasmid pTA148, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

546. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP012493 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176G_02, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

547. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031914 (Escherichia coli O157:H7 strain FWSEC0004 plasmid unnamed13, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

548. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038289 (Escherichia coli O157:H7 strain TX 376-2 plasmid pTX376-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

549. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP028612 (Escherichia coli strain 142 plasmid pTA142, complete sequence) position: , mismatch: 0, identity: 1.0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

550. spacer 1.1|64574|54|NC_004337|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.981

gaatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	CRISPR spacer
caatgccggatgcgctttgcttatccggcctacaaaatcgcagcgtgtaggcca	Protospacer
 *****************************************************

551. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026783 (Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

552. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026783 (Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

553. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP026844 (Shigella boydii strain NCTC 9733 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

-tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
atatct-cccggcagccttcagggaaaaatatcatcagatgg	Protospacer
 ***** ***********************************

554. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcaaccttcagggaaaaatatcatcagatgg	Protospacer
*************.***************************

555. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

556. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

557. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

558. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026876 (Shigella boydii strain ATCC 35964 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccagcagccttcagggaaaaatatcatcagatgg	Protospacer
*********.*******************************

559. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027460 (Escherichia coli strain 90-3040 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccatcagggaaaaatatcatcagatgg	Protospacer
**************** ************************

560. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027350 (Escherichia coli strain 2014C-3655 plasmid unnamed) position: , mismatch: 1, identity: 0.976

-tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
atatc-ccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
 **** ************************************

561. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027350 (Escherichia coli strain 2014C-3655 plasmid unnamed) position: , mismatch: 1, identity: 0.976

-tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
atatct-cccggcagccttcagggaaaaatatcatcagatgg	Protospacer
 ***** ***********************************

562. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026775 (Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

563. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026781 (Shigella dysenteriae strain 53-3937 plasmid unnamed) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

564. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatcaccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
**** ************************************

565. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatcaccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
**** ************************************

566. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027446 (Escherichia coli strain 2013C-3492 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccatcagggaaaaatatcatcagatgg	Protospacer
**************** ************************

567. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP011417 (Escherichia coli strain CFSAN029787 plasmid pCFSAN029787_01, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

568. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP007038 (Shigella flexneri G1663 plasmid pG1663, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

569. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

570. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcaccggcagccttcagggaaaaatatcatcagatgg	Protospacer
****** **********************************

571. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

572. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026879 (Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

573. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026785 (Shigella dysenteriae strain 80-547 plasmid unnamed) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

574. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026785 (Shigella dysenteriae strain 80-547 plasmid unnamed) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

575. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_019197 (Shigella flexneri plasmid pSF5, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatcaccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
**** ************************************

576. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024469 (Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

577. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024469 (Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

578. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026767 (Shigella boydii strain 59-248 plasmid unnamed) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

579. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026787 (Shigella dysenteriae strain NCTC 9718 plasmid unnamed) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcaccggcagccttcagggaaaaatatcatcagatgg	Protospacer
****** **********************************

580. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026787 (Shigella dysenteriae strain NCTC 9718 plasmid unnamed) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

581. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026787 (Shigella dysenteriae strain NCTC 9718 plasmid unnamed) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcaccggcagccttcagggaaaaatatcatcagatgg	Protospacer
****** **********************************

582. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP026789 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

583. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP037942 (Escherichia coli strain CFSAN027350 plasmid pCFSAN027350, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccatcagggaaaaatatcatcagatgg	Protospacer
**************** ************************

584. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP024231 (Escherichia coli O25:NM strain 2014EL-1343-2 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatataatcagatgg	Protospacer
******************************* *********

585. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027334 (Escherichia coli strain 2013C-3277 plasmid unnamed3) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccatcagggaaaaatatcatcagatgg	Protospacer
**************** ************************

586. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatcaccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
**** ************************************

587. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_007607 (Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

588. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_007607 (Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

589. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_022899 (Shigella dysenteriae 1617 plasmid pSLG231, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

590. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_022899 (Shigella dysenteriae 1617 plasmid pSLG231, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatgg	Protospacer
*******.*********************************

591. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_022899 (Shigella dysenteriae 1617 plasmid pSLG231, complete sequence) position: , mismatch: 1, identity: 0.976

-tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
atatct-cccggcagccttcagggaaaaatatcatcagatgg	Protospacer
 ***** ***********************************

592. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP027676 (Escherichia coli strain 88-3510 plasmid unnamed) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccatcagggaaaaatatcatcagatgg	Protospacer
**************** ************************

593. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP030765 (Escherichia coli strain 2017C-4109 plasmid p2017C-4109, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

594. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034796 (Escherichia coli strain 08-3918 plasmid p08-3918-1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

595. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038792 (Escherichia coli strain PF9285 plasmid pDW54_1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

596. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040573 (Escherichia coli O157:H7 strain ECP17-46 plasmid pCFSAN059540, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

597. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032802 (Escherichia coli strain ERL06-2442 plasmid pERL06-2442, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

598. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032796 (Escherichia coli strain ERL06-2503 plasmid pERL06-2503, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

599. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038418 (Escherichia coli O157:H7 strain 3-5-1 plasmid pGM351-1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

600. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP018240 (Escherichia coli strain 272 plasmid pO157, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

601. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038320 (Escherichia coli O157:H7 strain NE122 plasmid pNE122-1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

602. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP038341 (Escherichia coli O157:H7 strain H6437 plasmid pH6437-1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

603. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP040312 (Escherichia coli strain F3398 plasmid pO157, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

604. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015854 (Escherichia coli strain ATCC 43889 plasmid, complete genome) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

605. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP032812 (Escherichia coli strain ERL03-1416 plasmid pERL03-1416-1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

606. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP015021 (Escherichia coli strain 28RC1 plasmid p28RC1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatga	Protospacer
****************************************.

607. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025844 (Escherichia coli strain 720632 plasmid p720632_94, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

608. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025844 (Escherichia coli strain 720632 plasmid p720632_94, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

609. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025846 (Escherichia coli strain 720632 plasmid p720632_86, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

610. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025846 (Escherichia coli strain 720632 plasmid p720632_86, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

611. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP034959 (Escherichia coli strain WCHEC020032 plasmid p1_020032, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

612. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031232 (Escherichia coli strain Es_ST410_NW1_NDM_09_2017 plasmid pEsST410_NW_2, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

613. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_AP014804 (Escherichia coli O119:H6 strain EC404/03 plasmid pEC404/03-1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccgacagccttcagggaaaaatatcatcagatgg	Protospacer
**********.******************************

614. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP031654 (Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_01, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

615. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP029103 (Escherichia coli strain AR437 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

616. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP023896 (Escherichia coli strain FDAARGOS_433 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatag	Protospacer
***************************************.*

617. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP027028 (Shigella dysenteriae strain E670/74 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.976

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcaaggaaaaatatcatcagatgg	Protospacer
********************.********************

618. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to KY612498 (Escherichia coli plasmid pEC4103, complete sequence) position: , mismatch: 2, identity: 0.951

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatga	Protospacer
*******.********************************.

619. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to KY612499 (Escherichia coli plasmid pEC5106, complete sequence) position: , mismatch: 2, identity: 0.951

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatga	Protospacer
*******.********************************.

620. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to KY612500 (Escherichia coli plasmid pEC6413, complete sequence) position: , mismatch: 2, identity: 0.951

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctcctcggcagccttcagggaaaaatatcatcagatga	Protospacer
*******.********************************.

621. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046677 (Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence) position: , mismatch: 4, identity: 0.902

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tgacctcccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*. *..***********************************

622. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to CP046677 (Escherichia coli strain 152661 plasmid p152661_pINV, complete sequence) position: , mismatch: 7, identity: 0.829

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
ttttctacaagcagccttcagggaaaaatatcatcagatgg	Protospacer
* *... * .*******************************

623. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NZ_CP025846 (Escherichia coli strain 720632 plasmid p720632_86, complete sequence) position: , mismatch: 8, identity: 0.805

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tgtacaggctccagccttcagggaaaaatatcatcagatgg	Protospacer
*.* .   *  ******************************

624. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

625. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

626. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

627. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

628. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

629. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

630. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

631. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

632. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

633. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

634. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

635. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

636. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

637. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

638. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

639. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

640. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

641. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

642. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

643. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

644. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

645. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

646. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

647. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

648. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

649. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

650. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

651. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

652. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

653. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

654. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

655. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

656. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

657. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

658. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

659. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

660. spacer 1.1|64574|54|NC_004337|CRISPRCasFinder matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 12, identity: 0.778

gaatgccggatgcgctttgcttatccggcctacaaaatcgc-----agcgtgtaggcca	CRISPR spacer
tactgccggatgcgctttgcttatccggcctacaataccgcgaattaatttgta-----	Protospacer
 * ******************************** *.***     *.. ****

661. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

662. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

663. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

664. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

665. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

666. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

667. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

668. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

669. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

670. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

671. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

672. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

673. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

674. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

675. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

676. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

677. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

678. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

679. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

680. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

681. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

682. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

683. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

684. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

685. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

686. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

687. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

688. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

689. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

690. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

691. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

692. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

693. spacer 3.1|2363993|49|NC_004337|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12161 : 19381

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_705973.1\|12161_14078_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	9.0e-149	51.1
NP_705974.2\|14166_15297_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	1.4e-27	37.1
YP_008439227.1\|15400_15553_-	hypothetical protein	A0A0U2QV81	Escherichia_phage	1.6e-13	78.0
NP_705975.1\|16139_17306_+	pH-dependent sodium/proton antiporter	A0A2H4J5W3	uncultured_Caudovirales_phage	4.9e-89	50.3
NP_705976.2\|17371_18271_+	transcriptional activator NhaR	NA	NA	NA	NA
NP_705977.1\|18683_19079_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	6.3e-65	90.8
NP_705978.1\|19105_19381_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4

DBSCAN-SWA_2

203274 : 267434

Escherichia_phage(28.57%)

coat,tRNA,terminase,transposase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_706133.1\|203274_204573_+\|tRNA	tRNA(Ile)-lysidine synthetase	NA	NA	NA	NA
NP_706134.1\|204621_204882_-	Rho-binding antiterminator	NA	NA	NA	NA
NP_706135.1\|204868_205087_-	hypothetical protein	NA	NA	NA	NA
NP_706136.1\|205234_205780_+	hypothetical protein	NA	NA	NA	NA
NP_706137.1\|205776_206199_+	hypothetical protein	NA	NA	NA	NA
NP_706138.1\|206212_206923_+	copper homeostasis and adhesion lipoprotein	NA	NA	NA	NA
NP_706139.2\|207077_207902_-	hypothetical protein	NA	NA	NA	NA
NP_706140.2\|207954_209673_-\|tRNA	prolyl-tRNA synthetase	NA	NA	NA	NA
NP_706141.1\|209783_210491_-	hypothetical protein	NA	NA	NA	NA
NP_706142.1\|210487_210892_-	outer membrane lipoprotein	NA	NA	NA	NA
NP_706143.1\|211009_211825_-	DL-methionine transporter substrate-binding protein	NA	NA	NA	NA
NP_706144.1\|211864_212518_-	DL-methionine transporter permease	NA	NA	NA	NA
NP_706145.1\|212510_213542_-	DL-methionine transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-35	39.7
NP_706146.1\|213729_214305_+	D,D-heptose 1,7-bisphosphate phosphatase	NA	NA	NA	NA
NP_706147.1\|220421_221225_+	2,5-diketo-D-gluconate reductase B	A0A1V0SDE7	Indivirus	1.6e-38	36.2
NP_706148.1\|221263_222610_-\|transposase	insertion sequence IS4 transposase InsG	NA	NA	NA	NA
NP_706149.1\|222659_223574_-	LysR family transcriptional regulator	NA	NA	NA	NA
NP_706150.1\|223814_224615_+	hypothetical protein	NA	NA	NA	NA
NP_706151.2\|224842_225463_+	biotin synthase	NA	NA	NA	NA
NP_706152.2\|225510_226857_-	membrane-bound lytic murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	3.7e-08	35.1
NP_706153.1\|226928_227684_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
NP_706154.1\|227714_228440_+	hypothetical protein	NA	NA	NA	NA
NP_706155.3\|228436_229015_-	RNase HI	J9Q745	Salmonella_phage	2.9e-50	58.7
NP_706156.2\|228968_229700_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	7.6e-40	38.6
NP_706157.1\|230039_231086_-	hypothetical protein	NA	NA	NA	NA
NP_706159.1\|231655_233539_-	outer membrane usher protein	NA	NA	NA	NA
NP_706160.2\|233554_234049_-	hypothetical protein	NA	NA	NA	NA
NP_706164.1\|235829_236240_+	IS2 repressor TnpA	Q76S41	Shigella_phage	4.1e-59	99.2
NP_706165.1\|236197_237103_+\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	1.7e-177	99.3
NP_706166.1\|237159_237447_-	hypothetical protein	A0A1P8DTP0	Salmonella_phage	1.8e-29	60.0
NP_706170.1\|238840_239743_+\|terminase	terminase large subunit	I1TEI5	Salmonella_phage	6.0e-180	99.3
NP_706171.2\|239743_241909_+	packaging glycoprotein	A0A2D1GLJ6	Escherichia_phage	0.0e+00	99.2
NP_706172.1\|241922_242834_+	scaffolding protein	A0A2D1GLN7	Escherichia_phage	2.0e-159	99.0
NP_706173.1\|242833_244129_+\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	1.5e-240	98.4
NP_706174.2\|244173_244404_+	bacteriophage protein	A0A2D1GLK1	Escherichia_phage	1.2e-23	69.3
NP_706175.1\|244381_244882_+	DNA stabilization protein	G8EYJ2	Enterobacteria_phage	6.5e-91	99.4
NP_706176.1\|244881_246300_+	packaged DNA stabilization protein	Q9AYZ4	Salmonella_phage	1.2e-272	98.7
NP_706177.1\|246299_247148_+	packaged DNA stabilization protein	Q716G6	Shigella_phage	2.1e-102	98.6
NP_706178.2\|247147_247603_+\|head	head assembly protein	A0A2D1GLX4	Escherichia_phage	8.8e-87	99.3
NP_706179.1\|247605_248298_+	DNA transfer protein	G5DA80	Enterobacteria_phage	2.1e-111	99.6
NP_706180.1\|248307_249639_+	prophage DNA injection protein	A0A2D1GLX5	Escherichia_phage	3.1e-217	99.8
NP_706181.2\|249639_251370_+	DNA transfer protein	A0A088CQ71	Enterobacteria_phage	6.8e-281	97.9
NP_706182.1\|251495_251822_+	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	1.6e-53	96.3
NP_706184.1\|252755_253094_-	hypothetical protein	NA	NA	NA	NA
NP_706185.1\|253194_254679_-	alkaline phosphatase	NA	NA	NA	NA
NP_706186.1\|254710_254971_-	anti-RssB factor	NA	NA	NA	NA
YP_008439229.1\|255152_255356_-	hypothetical protein	NA	NA	NA	NA
NP_706187.1\|255433_256528_+	D-alanyl-alanine synthetase A	NA	NA	NA	NA
NP_706188.2\|256551_256791_-	hypothetical protein	NA	NA	NA	NA
NP_706189.1\|257023_257332_+	hypothetical protein	NA	NA	NA	NA
NP_706190.1\|257390_258485_-	hypothetical protein	NA	NA	NA	NA
NP_706191.2\|258497_259718_-	microcin B17 transporter	NA	NA	NA	NA
NP_706192.1\|260069_261227_+	beta-lactam binding protein AmpH	A0A2H4JAN9	uncultured_Caudovirales_phage	3.9e-06	22.1
NP_706193.1\|261227_261776_-	hypothetical protein	NA	NA	NA	NA
NP_706194.1\|262365_263178_-	hypothetical protein	U5P429	Shigella_phage	5.5e-148	93.0
NP_706195.1\|263451_264270_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9
NP_706196.1\|264305_264608_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706197.1\|264840_265410_-	hypothetical protein	NA	NA	NA	NA
NP_706198.1\|265384_266290_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	7.4e-178	99.3
NP_706199.3\|266247_266658_-	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_706200.1\|266736_267012_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_706201.1\|267038_267434_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6

DBSCAN-SWA_3

306598 : 334061

Shigella_phage(46.15%)

transposase,integrase,tail

attL 311231:311290|attR 328080:328139

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_706241.2\|306598_307654_-	outer membrane phosphoporin protein E	Q1MVN1	Enterobacteria_phage	3.5e-118	60.9
NP_706242.1\|307829_308105_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	1.9e-44	92.3
NP_706243.1\|308131_308527_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.0e-66	92.4
NP_706244.2\|308717_309821_+	gamma-glutamyl kinase	A0A1X9I5D0	Streptococcus_phage	4.1e-61	40.1
NP_706245.1\|309832_311086_+	gamma-glutamyl phosphate reductase	A0A1X9I5D4	Streptococcus_phage	5.8e-96	47.2
311231:311290	attL	NA	NA	NA	NA
NP_706246.1\|311290_311755_-\|integrase	phage integrase	U5P434	Shigella_phage	3.5e-83	96.1
NP_706247.1\|311781_312600_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9
NP_706248.1\|312635_312938_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706249.1\|312994_313720_-\|integrase	phage integrase	U5P434	Shigella_phage	2.1e-135	98.7
NP_706250.1\|313946_314252_-	hypothetical protein	U5P0J0	Shigella_phage	6.8e-51	100.0
NP_706251.1\|314251_314629_-	bacteriophage protein	U5P092	Shigella_phage	1.8e-53	99.0
NP_706253.1\|315477_315804_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	1.3e-52	95.4
NP_706254.1\|316046_316349_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706255.1\|316384_317203_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.7e-64	44.9
NP_706257.1\|317866_318229_+	flippase	U5P0S6	Shigella_phage	2.3e-58	99.2
NP_706258.1\|318225_319155_+	bactoprenol glucosyl transferase	S5FKN0	Shigella_phage	6.0e-175	100.0
NP_706259.1\|319151_320612_+	glucosyl transferase II	O21944	Shigella_phage	4.3e-268	99.2
NP_706260.1\|321001_322192_-	hypothetical protein	S5FM71	Shigella_phage	3.7e-225	99.5
NP_706261.1\|322642_323692_+	hypothetical protein	S5FNR8	Shigella_phage	4.1e-196	99.4
NP_706262.1\|324464_324899_-\|tail	phage tail fiber protein	S5FXM8	Shigella_phage	1.9e-78	100.0
NP_706263.1\|324870_325521_-	bacteriophage protein	S5FKM2	Shigella_phage	1.2e-116	100.0
NP_706264.1\|325573_326392_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	4.5e-65	44.9
NP_706265.1\|326427_326730_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706266.1\|326915_328079_+\|integrase	phage integrase	U5P434	Shigella_phage	4.5e-228	99.5
NP_706267.1\|328427_329600_+	acyltransferase	A0A088CPR9	Enterobacteria_phage	1.1e-210	99.5
328080:328139	attR	NA	NA	NA	NA
NP_706269.1\|330403_331222_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.7e-64	44.9
NP_706270.1\|331257_331620_-\|transposase	insertion sequence element IS600 transposase	A0A0N7BTS3	Escherichia_phage	4.6e-06	96.2
NP_706272.1\|332468_332795_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	5.6e-51	92.6
NP_706273.1\|332945_334061_+	diguanylate cyclase AdrA	A0A127AWB9	Bacillus_phage	1.5e-18	34.5

DBSCAN-SWA_4

386124 : 452093

Bacillus_phage(20.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_706325.1\|386124_386799_-\|transposase	insertion sequence element ISSfl4 transposase	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
NP_706326.1\|387168_388644_-	muropeptide transporter	NA	NA	NA	NA
NP_706327.4\|388687_389368_-	polymerase/proteinase	NA	NA	NA	NA
NP_706328.3\|389537_389888_+	murein genes regulator	NA	NA	NA	NA
NP_706329.2\|389896_390085_+	hypothetical protein	NA	NA	NA	NA
NP_706330.1\|390231_391530_+	trigger factor	NA	NA	NA	NA
NP_706331.2\|391776_392400_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.9e-64	63.9
NP_706332.1\|392525_393800_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.7e-132	56.4
NP_706333.2\|393987_396342_+\|protease	DNA-binding ATP-dependent protease La	A0A0R6PGP8	Moraxella_phage	1.0e-223	52.3
NP_706334.1\|396550_396823_+	transcriptional regulator HU subunit beta	A7KV42	Bacillus_phage	1.1e-20	58.4
NP_706335.1\|397014_398886_+	periplasmic folding chaperone	NA	NA	NA	NA
NP_706336.1\|399036_399408_+	hypothetical protein	NA	NA	NA	NA
NP_706337.1\|399501_399900_+	hypothetical protein	NA	NA	NA	NA
NP_706338.1\|399951_400647_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.9e-88	68.0
NP_706339.3\|400711_402136_-	transporter	NA	NA	NA	NA
NP_706340.1\|402491_403322_+	thiamin pyrimidine pyrophosphate hydrolase	NA	NA	NA	NA
NP_706341.2\|403388_403934_+	LRP-like transcriptional regulator	NA	NA	NA	NA
NP_706342.1\|403963_405736_+	multidrug transporter membrane protein\ATP-binding protein	W8CYL7	Bacillus_phage	3.7e-48	28.3
NP_706343.2\|405728_407510_+	multidrug transporter membrane protein\ATP-binding protein	W8CYL7	Bacillus_phage	3.7e-40	27.0
NP_706344.2\|407690_408029_+	nitrogen regulatory protein P-II 2	NA	NA	NA	NA
NP_706345.1\|408058_409345_+	ammonium transporter	NA	NA	NA	NA
NP_706346.2\|409393_410254_-	acyl-CoA thioesterase II	NA	NA	NA	NA
NP_706347.1\|410471_411044_+	hypothetical protein	NA	NA	NA	NA
NP_706348.1\|411136_412483_+\|transposase	insertion sequence IS4 transposase InsG	NA	NA	NA	NA
NP_706349.2\|412512_412824_-	hypothetical protein	NA	NA	NA	NA
NP_706350.1\|413202_413556_+	hypothetical protein	NA	NA	NA	NA
NP_706351.2\|413597_415148_-	hypothetical protein	NA	NA	NA	NA
NP_706352.2\|415311_415782_-	hypothetical protein	NA	NA	NA	NA
NP_706353.2\|416620_416839_-	gene expression modulator	NA	NA	NA	NA
NP_706354.1\|416864_417239_-	Hha toxicity attenuator	NA	NA	NA	NA
NP_706355.1\|417784_420934_-	multidrug efflux system protein AcrB	S5VTK5	Leptospira_phage	1.1e-53	23.9
NP_706356.2\|420956_422150_-	multidrug efflux system transporter AcrA	NA	NA	NA	NA
NP_706357.1\|422291_422939_+	DNA-binding transcriptional repressor AcrR	NA	NA	NA	NA
NP_706358.1\|423066_426429_+	hypothetical protein	NA	NA	NA	NA
NP_706359.1\|426640_426802_-	hypothetical protein	NA	NA	NA	NA
NP_706360.1\|426815_427343_-	primosomal replication protein N''	NA	NA	NA	NA
NP_706361.1\|427412_427790_+	hypothetical protein	NA	NA	NA	NA
NP_706362.2\|427942_428494_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.7e-31	47.3
NP_706363.1\|428622_430548_+	DNA polymerase III subunits gamma and tau	A0A1L2BWV7	Bacteriophage	5.1e-43	41.5
NP_706364.2\|430600_430930_+	hypothetical protein	NA	NA	NA	NA
NP_706365.1\|430929_431535_+	recombination protein RecR	NA	NA	NA	NA
NP_706366.1\|431644_433519_+	heat shock protein 90	A0A1B1ISV4	uncultured_Mediterranean_phage	1.8e-117	38.0
NP_706367.2\|433699_434344_+	adenylate kinase	NA	NA	NA	NA
NP_706368.1\|434475_435438_+	ferrochelatase	NA	NA	NA	NA
NP_706369.1\|435575_436394_-	acetylesterase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	2.5e-15	25.8
NP_706370.1\|436545_437850_+	inosine/guanosine kinase	NA	NA	NA	NA
NP_706371.1\|437982_439659_-	cation:proton antiport protein	NA	NA	NA	NA
NP_706372.1\|439896_441117_-	fosmidomycin resistance protein	NA	NA	NA	NA
NP_706373.1\|441334_442987_+	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
NP_706374.1\|443023_443503_-	hypothetical protein	NA	NA	NA	NA
NP_706375.1\|443706_444501_-	ligase	NA	NA	NA	NA
NP_706376.1\|444584_444980_+	hypothetical protein	A0A222YWD7	Escherichia_phage	5.9e-39	74.5
NP_706377.1\|445194_447699_-	copper exporting ATPase	A0A218MNH6	uncultured_virus	3.8e-115	37.9
NP_706378.1\|447960_448893_+	glutaminase	NA	NA	NA	NA
NP_706379.1\|448895_450188_+	amino acid/amine transport protein	NA	NA	NA	NA
NP_706380.1\|450312_450720_+	DNA-binding transcriptional regulator CueR	NA	NA	NA	NA
NP_706381.2\|450720_451176_-	hypothetical protein	NA	NA	NA	NA
NP_706382.1\|451175_452093_-\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_5

656763 : 747734

Enterobacteria_phage(31.37%)

tail,tRNA,terminase,transposase,integrase,capsid,head

attL 709946:710005|attR 717397:717797

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_706551.1\|656763_658188_+\|tRNA	(dimethylallyl)adenosine tRNA methylthiotransferase	NA	NA	NA	NA
NP_706552.2\|658301_659381_+	pho regulon ATP-binding protein	A0A0S0MVD6	Pseudomonas_phage	4.3e-47	46.6
NP_706553.1\|659377_659845_+	metal-binding heat shock protein	NA	NA	NA	NA
NP_706554.1\|659934_660813_+	magnesium/cobalt efflux protein CorC	NA	NA	NA	NA
NP_706555.1\|660837_662376_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
NP_706556.2\|662772_663681_+	glutamate and aspartate transporter subunit	NA	NA	NA	NA
NP_706557.1\|663850_664591_+	glutamate/aspartate transport system permease	NA	NA	NA	NA
NP_706558.1\|664590_665265_+	glutamate/aspartate transport system permease GltK	NA	NA	NA	NA
NP_706559.1\|665264_665990_+	glutamate/aspartate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-31	38.6
NP_706560.2\|666107_667043_+	ribonucleoside hydrolase 1	NA	NA	NA	NA
NP_706561.1\|668856_670308_-	hypothetical protein	NA	NA	NA	NA
NP_706562.1\|670304_671012_-\|tRNA	tRNA ligase	NA	NA	NA	NA
NP_706563.1\|671113_671668_+	hypothetical protein	NA	NA	NA	NA
NP_706564.1\|671677_673105_-	hypothetical protein	NA	NA	NA	NA
NP_706565.1\|673101_673809_-	hypothetical protein	NA	NA	NA	NA
NP_706566.1\|673966_674950_+	hypothetical protein	NA	NA	NA	NA
NP_706567.1\|675019_675502_-	hypothetical protein	NA	NA	NA	NA
NP_706568.2\|675736_678319_+\|tRNA	leucyl-tRNA synthetase	A0A2H4PQS0	Staphylococcus_phage	1.4e-184	42.3
NP_706569.1\|678333_678915_+	LPS-assembly lipoprotein RlpB	NA	NA	NA	NA
NP_706570.1\|678914_679946_+	DNA polymerase III subunit delta	NA	NA	NA	NA
NP_706571.1\|679947_680589_+	nicotinic acid mononucleotide adenylyltransferase	NA	NA	NA	NA
NP_706572.2\|680612_681224_+	alpha-ribazole-5'-phosphate phosphatase	NA	NA	NA	NA
NP_706573.2\|681483_681801_+	hypothetical protein	NA	NA	NA	NA
NP_706574.1\|681804_682272_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
NP_706575.1\|682302_684204_+	penicillin-binding protein 2	NA	NA	NA	NA
NP_706576.1\|684206_685319_+	cell wall shape-determining protein	NA	NA	NA	NA
NP_706577.1\|685329_686418_+	rare lipoprotein A	F5B3X9	Synechococcus_phage	3.6e-09	53.2
NP_706578.1\|686556_687768_+	D-alanyl-D-alanine carboxypeptidase subunit A	B6DZZ7	Stx2-converting_phage	7.5e-101	47.2
NP_706579.1\|687878_688142_+	hypothetical protein	NA	NA	NA	NA
NP_706580.4\|688308_688884_+	lipoate biosynthesis protein LipB	NA	NA	NA	NA
NP_706581.2\|689295_690096_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
NP_706582.1\|690304_691270_+	lipoyl synthase	NA	NA	NA	NA
NP_706583.1\|691370_691574_-	twin arginine translocase E	NA	NA	NA	NA
NP_706584.3\|691702_692491_-	amidase	NA	NA	NA	NA
NP_706585.1\|692583_692967_+	chromosome condensation membrane protein	A0A2H4J148	uncultured_Caudovirales_phage	6.8e-24	53.6
NP_706586.2\|693020_693230_-	cold shock protein CspE	A0A1W6JNX5	Morganella_phage	2.7e-22	78.1
NP_706587.1\|693404_693965_-	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA
NP_706588.2\|694553_695939_+	C4-dicarboxylate transporter DcuC	NA	NA	NA	NA
NP_706589.1\|696658_697168_-	repressor protein	NA	NA	NA	NA
NP_706590.2\|697730_699185_+\|transposase	phage transposase	C9DGL1	Escherichia_phage	1.6e-283	97.1
NP_706591.1\|699246_699549_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706592.1\|699584_700403_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9
NP_706593.1\|700414_700690_+	hypothetical protein	NA	NA	NA	NA
NP_706594.1\|700686_701628_-	bacteriophage protein	A0A0M3ULD3	Salmonella_phage	2.3e-153	85.6
NP_706596.1\|702132_703353_-	bacteriophage protein	A0A0M4R5A6	Salmonella_phage	2.5e-192	85.6
NP_706597.3\|703356_704100_-	bacteriophage protein	A0A0M4REK0	Salmonella_phage	5.3e-89	84.4
NP_706598.1\|703990_705457_-	bacteriophage protein	A0A0M4S6U1	Salmonella_phage	9.6e-260	91.0
NP_706600.1\|706201_707107_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	3.7e-177	99.0
NP_706601.3\|707064_707475_-	IS2 repressor TnpA	Q76S41	Shigella_phage	4.1e-59	99.2
NP_706602.2\|707505_708129_-	bacteriophage protein	K4NXU1	Acinetobacter_phage	2.9e-88	73.8
NP_706603.1\|708139_708904_-	bacteriophage protein	G8C7P2	Escherichia_phage	7.0e-12	55.4
NP_706604.1\|709098_709611_+	hypothetical protein	NA	NA	NA	NA
709946:710005	attL	NA	NA	NA	NA
NP_706605.1\|709981_710320_+\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
NP_706606.1\|710346_711186_+\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_706607.1\|711214_711637_+	bacteriophage protein	A0A0U2S606	Escherichia_phage	9.4e-43	63.4
NP_706608.1\|712949_713768_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9
NP_706609.1\|713803_714106_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706610.1\|714381_716241_+	bacteriophage protein	B0FEC9	Escherichia_phage	0.0e+00	98.0
NP_706611.1\|716215_717055_-\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_706612.1\|717081_717420_-\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
NP_706613.2\|717476_718355_+	replication protein DnaC	Q8W641	Enterobacteria_phage	3.0e-139	95.6
717397:717797	attR	NA	NA	NA	NA
NP_706614.1\|718351_719743_+	helicase	Q8W640	Enterobacteria_phage	3.6e-256	95.7
NP_706615.1\|719739_719997_+	bacteriophage protein	Q8W639	Enterobacteria_phage	1.1e-33	93.8
NP_706616.2\|720284_720665_+	Q protein	A0A088CD47	Shigella_phage	8.2e-62	87.9
NP_706617.1\|721467_721683_+	S protein	M1FN85	Enterobacteria_phage	2.2e-32	94.4
NP_706618.1\|721686_722316_+	bacteriophage protein	Q08JA0	Stx2-converting_phage	4.7e-30	57.6
NP_706619.3\|722381_722915_+	endolysin R of prophage CP-933V	K7PLY1	Enterobacteria_phage	1.6e-100	98.3
NP_706620.2\|722911_723316_+	endopeptidase	Q9AZ06	Salmonella_phage	1.6e-63	96.3
NP_706621.1\|723377_723680_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706624.1\|724599_724926_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	2.5e-51	93.5
NP_706625.1\|725010_725829_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.5e-65	45.2
NP_706626.1\|725856_726180_+\|terminase	DNA packaging protein of prophage; terminase small subunit	NA	NA	NA	NA
NP_706631.1\|729845_731351_+\|head,tail	head-tail preconnector gp5	A0A2I6TC87	Escherichia_phage	4.3e-98	53.0
NP_706632.1\|731387_731735_+\|capsid	capsid protein small subunit	A0A2R9YJN3	Escherichia_phage	6.4e-21	55.9
NP_706633.1\|731792_732821_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.8e-116	62.8
NP_706634.2\|732872_733259_+	DNA-packaging protein	NA	NA	NA	NA
NP_706635.1\|733270_733648_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	2.5e-31	57.3
NP_706636.2\|733634_734219_+\|tail	prophage CP-933K tail protein	A5LH33	Enterobacteria_phage	6.0e-88	87.6
NP_706637.1\|734215_734617_+\|tail	prophage CP-933K tail protein	A0A291AWY2	Escherichia_phage	1.1e-69	94.0
NP_706638.1\|734621_735368_+\|tail	prophage CP-933K tail protein	A5LH35	Enterobacteria_phage	3.4e-128	96.3
NP_706639.1\|735408_735813_+\|tail	prophage CP-933K tail protein	A5LH36	Enterobacteria_phage	5.1e-62	92.2
NP_706640.1\|735821_736151_+\|tail	prophage CP-933K tail protein	A5LH37	Enterobacteria_phage	1.3e-55	99.1
NP_706641.1\|736122_739164_+\|tail	tail length tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	86.5
NP_706642.1\|739163_739493_+\|tail	minor tail protein	A5LH39	Enterobacteria_phage	2.4e-57	97.2
NP_706643.1\|739492_740191_+\|tail	minor tail protein	A0A0K2FJ01	Enterobacteria_phage	8.4e-121	89.7
NP_706644.1\|740195_740939_+\|tail	tail assembly protein	K7PLW1	Enterobacteria_phage	6.8e-145	94.7
NP_706645.1\|740902_741478_+\|tail	phage tail protein	A5LH42	Enterobacteria_phage	1.4e-81	84.5
NP_706646.1\|741538_745018_+	host specificity protein	A5LH43	Enterobacteria_phage	0.0e+00	87.3
NP_706647.1\|745085_745685_+	membrane protein	H6WZM8	Escherichia_phage	1.8e-103	93.0
NP_706649.1\|747110_747734_+\|tail	prophage CP-933K tail protein	A0A0U2QQK4	Escherichia_phage	5.1e-77	75.9

DBSCAN-SWA_6

836693 : 966062

111

Escherichia_phage(20.0%)

transposase,protease,integrase,tRNA

attL 867208:867267|attR 932413:932595

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_706730.1\|836693_837902_-\|transposase	insertion element iso-IS10R transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
NP_706731.1\|837953_838661_+	nitroreductase A	NA	NA	NA	NA
NP_706732.1\|838721_839624_+	ribosomal protein S6 modification protein	I3ULC9	Synechococcus_phage	1.7e-36	34.4
NP_706733.2\|839711_840188_+	sensory transduction regulator	NA	NA	NA	NA
NP_706734.2\|840539_841652_+	putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA
NP_706735.3\|841665_842880_+	putrescine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.6e-29	34.0
NP_706736.1\|842889_843843_+	putrescine ABC transporter permease	NA	NA	NA	NA
NP_706737.2\|843839_844685_+	putrescine ABC transporter permease	NA	NA	NA	NA
NP_706738.2\|844744_845233_+	hypothetical protein	NA	NA	NA	NA
NP_706739.1\|845273_846401_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	3.5e-28	27.6
NP_706740.2\|846575_847307_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
NP_706741.1\|847598_848267_-	arginine transporter permease subunit ArtM	NA	NA	NA	NA
NP_706742.1\|848266_848983_-	arginine transporter permease subunit ArtQ	NA	NA	NA	NA
NP_706743.1\|848989_849721_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
NP_706744.2\|849738_850467_-	arginine transporter ATP-binding subunit	G9BWD6	Planktothrix_phage	6.0e-29	36.7
NP_706745.2\|850684_851200_-	lipoprotein	NA	NA	NA	NA
NP_706746.2\|851848_853618_+	hypothetical protein	NA	NA	NA	NA
NP_706747.1\|853828_854152_+	hypothetical protein	NA	NA	NA	NA
NP_706748.1\|854148_854979_+	regulator	A0A1B0UZW5	Roseobacter_phage	3.3e-07	30.0
NP_706749.2\|854975_856025_-	nucleotide di-P-sugar epimerase or dehydratase	NA	NA	NA	NA
NP_706750.2\|856087_857518_-	hypothetical protein	NA	NA	NA	NA
NP_706751.1\|857528_858530_-	L-threonine aldolase	NA	NA	NA	NA
NP_706752.1\|858566_860285_-	pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.8e-31	24.1
NP_706753.2\|860417_861386_-	HCP oxidoreductase, NADH-dependent	NA	NA	NA	NA
NP_706754.3\|861397_863056_-	prismane HCP protein	NA	NA	NA	NA
NP_706755.1\|863193_864141_-	surface protein	NA	NA	NA	NA
NP_706756.1\|864218_865124_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	1.7e-177	99.3
NP_706757.1\|865081_865492_-	IS2 repressor TnpA	Q76S41	Shigella_phage	4.1e-59	99.2
NP_706758.2\|865889_866585_-	aquaporin Z	NA	NA	NA	NA
NP_706759.2\|866636_867140_-	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	2.2e-83	91.9
NP_706760.1\|867058_867334_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	2.5e-44	92.3
867208:867267	attL	NA	NA	NA	NA
NP_706761.1\|867785_869444_+	hypothetical protein	NA	NA	NA	NA
NP_706762.1\|869440_870433_-	hypothetical protein	NA	NA	NA	NA
NP_706763.1\|870501_870636_+	hypothetical protein	NA	NA	NA	NA
NP_706764.2\|870547_871663_+	macrolide transporter subunit MacA	NA	NA	NA	NA
NP_706765.1\|871659_873606_+	macrolide transporter ATP-binding /permease	G9BWD6	Planktothrix_phage	5.5e-37	39.6
NP_706766.1\|873678_873903_-	stationary phase/starvation inducible regulatory protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
NP_706767.1\|874225_874546_+\|protease	ATP-dependent Clp protease adaptor protein ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
NP_706768.2\|874576_876853_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.4
NP_706769.1\|877596_877815_-	translation initiation factor IF-1	NA	NA	NA	NA
NP_706770.1\|878099_878804_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
NP_706771.1\|878845_880567_-	cysteine/glutathione ABC transporter membrane/ATP-binding protein	W8CYL7	Bacillus_phage	2.2e-21	25.2
NP_706772.1\|880567_882334_-	cysteine/glutathione ABC transporter membrane/ATP-binding protein	W8CYL7	Bacillus_phage	4.6e-22	24.0
NP_706773.2\|882456_883422_-	thioredoxin reductase	A0A2I2L5E1	Orpheovirus	3.2e-62	44.3
NP_706774.2\|883965_884460_+	leucine-responsive transcriptional regulator	NA	NA	NA	NA
NP_706775.1\|884594_888623_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
NP_706776.1\|888774_889389_+	lipoprotein chaperone	NA	NA	NA	NA
NP_706777.1\|889399_890743_+	recombination factor protein RarA	G3MBE0	Bacillus_virus	4.3e-81	41.0
NP_706778.1\|890833_892126_+\|tRNA	seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
NP_706780.1\|894819_895437_+	anaerobic dimethyl sulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	3.8e-77	60.6
NP_706781.2\|895438_896230_+	anaerobic dimethyl sulfoxide reductase subunit C	NA	NA	NA	NA
NP_706782.1\|896265_896892_-	hypothetical protein	NA	NA	NA	NA
NP_706783.1\|897206_898355_+	MFS family transporter protein	NA	NA	NA	NA
NP_706784.1\|898667_899342_+\|transposase	insertion sequence element ISSfl4 transposase	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
NP_706785.1\|899338_899686_+	insertion sequence element ISSfl4 ORF2	A0A0P0ZDM8	Stx2-converting_phage	4.1e-44	73.8
NP_706786.1\|899705_901307_+\|transposase	insertion sequence element ISSfl4 transposase	A0A0P0ZEB3	Stx2-converting_phage	4.9e-148	61.5
NP_706788.1\|901846_902686_-\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_706789.1\|902712_903051_-\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
NP_706790.1\|903198_903489_-	bacteriophage protein	A0A0U2KD41	Escherichia_phage	9.6e-47	88.5
NP_706791.1\|903786_904089_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706792.1\|904124_904943_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	6.5e-64	44.9
NP_706793.2\|904982_905354_-	bacteriophage protein	A0A0U2RT94	Escherichia_phage	1.2e-62	93.5
NP_706794.1\|905392_905680_-	hypothetical protein	NA	NA	NA	NA
YP_008439234.1\|905929_906142_-	hypothetical protein	A0A0P0ZAX5	Stx2-converting_phage	4.0e-26	90.0
NP_706795.1\|906312_906879_-	hypothetical protein	NA	NA	NA	NA
YP_008439235.1\|907146_907560_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	4.6e-58	97.5
NP_706797.1\|907560_907983_-	bacteriophage protein	A0A2I6TCA7	Escherichia_phage	5.9e-53	76.6
NP_706798.1\|908889_909522_-	bacteriophage protein	G9L6A8	Escherichia_phage	1.3e-43	65.3
NP_706799.1\|909599_910022_-	bacteriophage protein	A0A0U2RXZ9	Escherichia_phage	3.8e-68	93.6
NP_706800.1\|910005_910233_-	DNA-binding transcriptional regulator DicC	NA	NA	NA	NA
NP_706801.1\|910309_910717_+	transcriptional repressor DicA	I6PD69	Cronobacter_phage	1.7e-28	49.6
NP_706802.2\|910919_911075_+	hypothetical protein	M4QQ57	Salicola_phage	5.2e-07	53.2
NP_706803.1\|911521_912427_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	3.7e-177	99.0
NP_706804.3\|912384_912795_-	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_706805.1\|913189_914146_+	bacteriophage protein	A0A0P0ZE80	Stx2-converting_phage	1.1e-54	57.0
NP_706806.1\|914659_914962_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706807.1\|914997_915816_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.9e-63	44.5
NP_706808.1\|915840_916485_-	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	7.3e-111	96.2
NP_706809.1\|916828_917647_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	7.2e-63	44.5
NP_706810.1\|917682_917985_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706811.2\|918050_918668_+	bacteriophage protein	A0A0U2QQK4	Escherichia_phage	5.7e-81	76.5
NP_706812.2\|921554_922550_+	6-phosphogluconolactonase	NA	NA	NA	NA
NP_706813.2\|923832_924780_+	hypothetical protein	NA	NA	NA	NA
NP_706814.2\|924918_926289_+	membrane pump protein	NA	NA	NA	NA
NP_706815.2\|926471_928652_+	hydratase	NA	NA	NA	NA
NP_706816.1\|928792_930076_-	acyl-CoA thioesterase	NA	NA	NA	NA
NP_706818.1\|931192_932011_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	6.5e-64	44.5
NP_706819.1\|932046_932349_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706820.2\|932757_933498_-	pyruvate formate lyase-activating enzyme 1	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5
932413:932595	attR	NA	NA	NA	NA
NP_706821.1\|933689_935972_-	formate acetyltransferase 1	A0A2P0VNR5	Tetraselmis_virus	4.9e-162	41.2
NP_706822.2\|936026_936884_-	formate transporter	NA	NA	NA	NA
NP_706823.2\|937289_939050_-	hypothetical protein	NA	NA	NA	NA
NP_706825.1\|940004_941093_+	3-phosphoserine/phosphohydroxythreonine aminotransferase	M1Q1P2	Streptococcus_phage	3.5e-81	46.8
NP_706826.1\|941163_942447_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
NP_706827.1\|942572_943919_+\|transposase	insertion sequence IS4 transposase InsG	NA	NA	NA	NA
NP_706828.2\|944054_944819_+	heat shock protein	NA	NA	NA	NA
NP_706829.1\|944991_945675_+	cytidylate kinase	NA	NA	NA	NA
NP_706830.1\|945785_947459_+	30S ribosomal protein S1	NA	NA	NA	NA
NP_706831.1\|947618_947903_+	integration host factor subunit beta	A7KV42	Bacillus_phage	3.2e-10	40.2
NP_706832.1\|950405_952154_+	lipid transporter ATP-binding/permease	W8CYL7	Bacillus_phage	3.3e-57	29.8
NP_706833.1\|952150_953137_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
NP_706834.1\|953173_954406_+	hypothetical protein	NA	NA	NA	NA
NP_706835.1\|954457_954640_+	hypothetical protein	NA	NA	NA	NA
NP_706836.1\|954636_955383_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
NP_706837.1\|955536_956430_+	hypothetical protein	NA	NA	NA	NA
NP_706838.2\|956406_957186_-	hypothetical protein	NA	NA	NA	NA
NP_706839.2\|957321_958107_+	S-adenosyl-L-methionine-dependent methyltransferase	NA	NA	NA	NA
NP_706840.1\|958103_959426_+	condesin subunit F	NA	NA	NA	NA
NP_706841.2\|959433_960111_+	condesin subunit E	NA	NA	NA	NA
NP_706842.1\|960110_964571_+	cell division protein MukB	NA	NA	NA	NA
NP_706843.1\|964715_966062_+\|transposase	insertion sequence IS4 transposase InsG	NA	NA	NA	NA

DBSCAN-SWA_7

1023691 : 1081082

Escherichia_phage(18.18%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_706897.1\|1023691_1024279_+\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
NP_706898.1\|1024275_1024674_+	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA
NP_706899.1\|1024670_1025660_+	Hydrogenase-1 operon protein hyaF	NA	NA	NA	NA
NP_706901.2\|1026166_1027711_+	cytochrome bd-II oxidase subunit 1	NA	NA	NA	NA
NP_706902.1\|1027722_1028859_+	cytochrome bd-II oxidase subunit 2	NA	NA	NA	NA
NP_706903.2\|1029042_1030341_+	phosphoanhydride phosphorylase	NA	NA	NA	NA
NP_706904.1\|1030455_1032402_-	hypothetical protein	NA	NA	NA	NA
NP_706905.3\|1032641_1033100_-	phosphatase	NA	NA	NA	NA
NP_706906.2\|1033075_1034215_-	polysaccharide export protein Wza	NA	NA	NA	NA
NP_706907.1\|1034260_1036357_-	hypothetical protein	NA	NA	NA	NA
NP_706908.1\|1036356_1037103_-	hypothetical protein	NA	NA	NA	NA
NP_706909.1\|1037099_1037744_-	regulator	NA	NA	NA	NA
NP_706910.2\|1037850_1038174_-	hypothetical protein	NA	NA	NA	NA
NP_706911.1\|1038597_1038810_-	cold shock-like protein CspH	NA	NA	NA	NA
NP_706912.2\|1039107_1039308_+	cold shock protein CspG	A0A1W6JNX5	Morganella_phage	3.1e-20	71.2
NP_706913.1\|1039481_1039712_+	cold shock gene	NA	NA	NA	NA
NP_706914.1\|1039701_1039875_+	hypothetical protein	NA	NA	NA	NA
NP_706915.2\|1039923_1040997_-	hypothetical protein	NA	NA	NA	NA
NP_706916.1\|1041098_1043528_-	histidine protein kinase/phosphatase	Q8QKV7	Ectocarpus_siliculosus_virus	1.6e-25	33.8
NP_706917.1\|1043892_1044921_+	TMAO reductase system periplasmic protein TorT	NA	NA	NA	NA
NP_706918.1\|1044893_1045586_-	DNA-binding transcriptional regulator TorR	W8CYM9	Bacillus_phage	1.0e-17	28.0
NP_706919.2\|1045672_1046845_+	trimethylamine N-oxide reductase cytochrome c-type subunit	NA	NA	NA	NA
NP_706920.1\|1049587_1049983_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.0e-66	92.4
NP_706921.1\|1050009_1050285_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	4.2e-44	92.3
NP_706922.2\|1050850_1051156_-	chaperone-modulator protein CbpM	NA	NA	NA	NA
NP_706923.1\|1051155_1052076_-	curved DNA-binding protein CbpA	A0A1V0SIM1	Klosneuvirus	4.2e-11	43.0
NP_706924.1\|1052336_1053593_+	hypothetical protein	NA	NA	NA	NA
NP_706925.2\|1053885_1055127_+	glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA
NP_706926.1\|1055164_1055392_-	hypothetical protein	NA	NA	NA	NA
NP_706927.1\|1055412_1056009_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
NP_706928.1\|1056570_1057965_-	transporter	Q9KX94	Enterobacteria_phage	4.7e-232	98.4
NP_706929.2\|1057919_1058378_-	hypothetical protein	Q9KX93	Enterobacteria_phage	1.0e-50	96.9
NP_706930.1\|1058424_1059015_-	malonic semialdehyde reductase	NA	NA	NA	NA
NP_706931.2\|1059024_1059825_-	acetyltransferase	NA	NA	NA	NA
NP_706932.1\|1059832_1060219_-	hypothetical protein	NA	NA	NA	NA
NP_706933.1\|1060230_1060965_-	synthetase	NA	NA	NA	NA
NP_706934.2\|1060922_1062071_-	hypothetical protein	NA	NA	NA	NA
NP_706935.1\|1062301_1062940_+	HTH-type transcriptional regulator RutR	NA	NA	NA	NA
NP_706936.1\|1063234_1064422_-\|transposase	insertion sequence IS91 transposase	NA	NA	NA	NA
NP_706937.1\|1064421_1064844_-	insertion sequence IS91 protein	NA	NA	NA	NA
NP_706938.1\|1064942_1065551_+	cytochrome	NA	NA	NA	NA
NP_706939.1\|1065608_1066736_+	hypothetical protein	NA	NA	NA	NA
NP_706940.1\|1066741_1068007_+	hypothetical protein	NA	NA	NA	NA
NP_706941.1\|1068478_1069402_+	hypothetical protein	R4II13	Cronobacter_phage	1.0e-89	75.7
NP_706942.1\|1069511_1070378_-\|transposase	insertion sequence IS3A transposase InsF	A0A0P0I4A4	Acinetobacter_phage	2.3e-51	40.6
NP_706943.1\|1070374_1070683_-\|transposase	insertion sequence IS3 transposase InsE	NA	NA	NA	NA
NP_706944.1\|1071265_1072252_+	hypothetical protein	NA	NA	NA	NA
NP_706945.1\|1073759_1074497_+	hydrolase	NA	NA	NA	NA
NP_706946.1\|1074520_1075075_+	oxidoreductase subunit	NA	NA	NA	NA
NP_706947.2\|1075146_1075668_+	hypothetical protein	NA	NA	NA	NA
NP_706948.1\|1076771_1077980_-\|transposase	insertion element iso-IS10R transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
NP_706949.1\|1078312_1078702_-	curli assembly protein CsgE	NA	NA	NA	NA
NP_706950.2\|1078706_1079357_-	DNA-binding transcriptional regulator CsgD	NA	NA	NA	NA
NP_706951.2\|1080110_1080566_+	curlin minor subunit CsgB	NA	NA	NA	NA
NP_706952.1\|1080779_1081082_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1095293 : 1102070

Shigella_phage(50.0%)

transposase,integrase

attL 1090813:1090827|attR 1108975:1108989

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1090813:1090827	attL	NA	NA	NA	NA
NP_706965.1\|1095293_1095620_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	1.6e-53	96.3
NP_706966.1\|1096015_1096354_+\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
NP_706967.1\|1096380_1097220_+\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	6.4e-168	99.3
NP_706968.1\|1097225_1097729_-	bacteriophage protein	A0A0D4DAW4	Salmonella_phage	3.0e-35	74.4
NP_706969.3\|1097747_1098158_+	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_706970.1\|1098115_1099021_+\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	4.8e-177	98.7
NP_706971.1\|1099416_1099743_+	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	1.6e-53	96.3
NP_706973.1\|1100913_1101216_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_706974.1\|1101251_1102070_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	6.5e-64	44.5
1108975:1108989	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1178709 : 1210174

uncultured_Caudovirales_phage(53.85%)

tail,terminase,transposase,portal,head,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_707046.2\|1178709_1180458_+	bacteriophage P4 DNA primase	Q7M2A8	Enterobacteria_phage	7.3e-89	39.5
NP_707047.3\|1180746_1181025_+	bacteriophage protein	NA	NA	NA	NA
NP_707048.3\|1181561_1181864_+	bacteriophage protein	NA	NA	NA	NA
NP_707049.2\|1183361_1183934_+\|head,protease	head maturation protease of prophage CP-933C	A0A2H4JB68	uncultured_Caudovirales_phage	1.6e-61	63.5
NP_707050.1\|1183935_1185147_+\|head,portal	head portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	6.9e-187	78.2
NP_707051.1\|1185143_1185482_+\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	1.7e-31	52.7
NP_707052.1\|1185478_1185775_+	bacteriophage protein	A0A2H4JD08	uncultured_Caudovirales_phage	2.2e-30	62.2
NP_707053.3\|1185774_1186215_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.5e-62	72.6
NP_707054.1\|1186198_1186381_+	hypothetical protein	NA	NA	NA	NA
NP_707055.1\|1186451_1186763_+	bacteriophage protein	A0A2H4JHS3	uncultured_Caudovirales_phage	1.1e-43	82.4
NP_707056.2\|1186929_1188408_+\|terminase	terminase of prophage CP-933C	A0A2H4JB64	uncultured_Caudovirales_phage	1.5e-247	82.5
NP_707057.1\|1188421_1188703_+	bacteriophage protein	NA	NA	NA	NA
NP_707058.1\|1189499_1190960_-	sensor protein PhoQ	NA	NA	NA	NA
NP_707059.1\|1190959_1191631_-	DNA-binding transcriptional regulator PhoP	NA	NA	NA	NA
NP_707060.1\|1191799_1193170_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.7e-107	44.9
NP_707061.2\|1193173_1193815_-	lysogenization regulator	NA	NA	NA	NA
NP_707062.3\|1193850_1195002_-	hypothetical protein	NA	NA	NA	NA
NP_707063.1\|1195010_1195472_-	phosphohydrolase	NA	NA	NA	NA
NP_707064.1\|1195481_1196105_-	23S rRNA pseudouridine(2457) synthase	NA	NA	NA	NA
NP_707065.1\|1196306_1197557_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
NP_707066.2\|1198441_1199965_+	hypothetical protein	NA	NA	NA	NA
YP_008439239.1\|1200060_1200297_+	membrane protein	NA	NA	NA	NA
YP_008439240.1\|1200715_1200925_+	ATPase	NA	NA	NA	NA
NP_707067.1\|1201041_1203363_+	hypothetical protein	A0A2L1IV18	Escherichia_phage	1.6e-91	43.3
NP_707068.1\|1203419_1203755_-	hypothetical protein	NA	NA	NA	NA
NP_707069.2\|1203758_1204043_-	hypothetical protein	NA	NA	NA	NA
YP_008439241.1\|1204612_1205023_+	hypothetical protein	NA	NA	NA	NA
NP_707070.1\|1205394_1205661_-	cell division topological specificity factor MinE	NA	NA	NA	NA
NP_707071.1\|1205664_1206477_-	cell division inhibitor MinD	NA	NA	NA	NA
NP_707072.2\|1206500_1207196_-	septum formation inhibitor	NA	NA	NA	NA
NP_707073.1\|1207919_1208825_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	1.7e-177	99.3
NP_707074.3\|1208782_1209193_-	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_707075.1\|1209865_1210174_+\|transposase	insertion sequence IS3 transposase InsE	NA	NA	NA	NA

DBSCAN-SWA_10

1387235 : 1421884

Escherichia_phage(45.16%)

transposase,integrase,tail

attL 1404418:1404477|attR 1421143:1421817

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_707234.1\|1387235_1388432_+\|transposase	insertion sequence element ISSfl2 transposase	NA	NA	NA	NA
NP_707236.1\|1388807_1389728_-	hypothetical protein	NA	NA	NA	NA
NP_707237.1\|1390344_1391163_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.4e-63	44.5
NP_707238.1\|1391198_1391501_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707239.1\|1392028_1392934_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	1.7e-177	99.3
NP_707240.3\|1392891_1393302_-	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_707241.4\|1394095_1394842_+	DnaC-like chromosome replication protein	V5UQI5	Shigella_phage	1.1e-121	88.8
NP_707242.1\|1394856_1395279_+	bacteriophage protein	A0A2I6TCA7	Escherichia_phage	1.1e-51	75.9
NP_707243.1\|1395279_1395693_+	bacteriophage protein	A0A2R2Z307	Escherichia_phage	4.6e-58	97.5
NP_707244.1\|1395785_1396004_+	hypothetical protein	A0A1I9LJM2	Stx_converting_phage	1.2e-28	90.3
NP_707245.1\|1396005_1396371_+	hypothetical protein	A0A2R2Z2X9	Escherichia_phage	2.5e-68	99.2
NP_707246.1\|1396367_1397033_+	hypothetical protein	A0A076G611	Escherichia_phage	6.1e-36	44.9
NP_707247.1\|1397032_1397398_+	hypothetical protein	Q08J61	Stx2-converting_phage	6.1e-30	53.7
YP_008439244.1\|1397795_1398008_+	regulatory protein	A0A0U2QV81	Escherichia_phage	8.1e-27	92.9
YP_008439245.1\|1398244_1398496_+	hypothetical protein	NA	NA	NA	NA
NP_707248.1\|1398513_1398909_-	insertion element IS1 protein InsB	NA	NA	NA	NA
NP_707249.1\|1398935_1399211_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	2.5e-44	92.3
NP_707250.1\|1399344_1399944_+	bacteriophage protein	A0A0U2RT94	Escherichia_phage	1.4e-108	94.5
NP_707251.1\|1399943_1400234_+	bacteriophage protein	A0A0U2KD41	Escherichia_phage	3.3e-47	89.6
NP_707252.1\|1400230_1400785_+	bacteriophage protein	A0A0U2S606	Escherichia_phage	3.7e-71	70.5
NP_707253.1\|1401172_1401475_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707254.1\|1401510_1402329_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.1e-63	44.9
NP_707256.1\|1402921_1403293_+\|tail	tail fiber assembly protein	Q8W612	Enterobacteria_phage	2.6e-52	82.9
NP_707257.2\|1403316_1404585_+\|tail	tail fiber protein	Q8W611	Enterobacteria_phage	2.2e-74	43.0
1404418:1404477	attL	NA	NA	NA	NA
NP_707258.2\|1404595_1405159_+	hypothetical protein	A0A0U2QQK4	Escherichia_phage	4.7e-82	79.1
NP_707259.1\|1405359_1406217_-	iron transporter inner membrane protein	NA	NA	NA	NA
NP_707260.1\|1406213_1407071_-	iron ABC transporter permease	NA	NA	NA	NA
NP_707261.1\|1407067_1407895_-	iron ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.8e-11	28.5
NP_707262.2\|1407894_1408785_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
NP_707263.1\|1409935_1410211_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_707264.1\|1410237_1410633_+	insertion element IS1 protein InsB	NA	NA	NA	NA
NP_707266.2\|1411036_1411657_-\|integrase	insertion sequence element IS629 integrase core domain-containing protein	Q6H9S3	Enterobacteria_phage	2.8e-112	98.5
NP_707267.1\|1411969_1412296_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	1.8e-54	97.2
NP_707268.2\|1412370_1413414_-	bacteriophage protein	I6PCV5	Cronobacter_phage	8.3e-173	83.6
NP_707269.1\|1413473_1413794_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	2.5e-40	83.3
NP_707271.1\|1415036_1416461_-	exodeoxyribonuclease VIII	A0A088CD28	Shigella_phage	4.5e-153	59.8
NP_707272.2\|1416560_1416836_-	hypothetical protein	A0A0U2QW85	Escherichia_phage	4.4e-41	93.4
NP_707273.1\|1417080_1417302_-	FtsZ inhibitor protein	A0A0U2RTC4	Escherichia_phage	6.9e-37	97.3
NP_707274.1\|1417378_1418284_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	7.4e-178	99.3
NP_707275.1\|1418241_1418652_-	IS2 repressor TnpA	Q76S41	Shigella_phage	4.1e-59	99.2
NP_707278.1\|1421320_1421884_+	hypothetical protein	A0A0U2QQK4	Escherichia_phage	6.4e-79	76.5
1421143:1421817	attR	NA	NA	NA	NA

DBSCAN-SWA_11

1574203 : 1632981

Shigella_phage(29.63%)

transposase,integrase

attL 1632006:1632022|attR 1639804:1639820

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_707422.1\|1574203_1574479_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_707423.1\|1574505_1574901_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_707424.1\|1574978_1575797_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.1e-63	44.9
YP_008439249.1\|1576150_1576312_-	hypothetical protein	Q08JA2	Stx2-converting_phage	5.4e-15	91.3
YP_008439250.1\|1576308_1576512_-	hypothetical protein	H6WZJ9	Escherichia_phage	7.7e-27	95.2
NP_707425.1\|1576756_1577092_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
NP_707426.1\|1578401_1579223_-	antitermination protein	K7P7B9	Enterobacteria_phage	6.1e-78	58.6
NP_707427.1\|1579237_1579594_-	endodeoxyribonuclease RUS	V5URS4	Shigella_phage	6.1e-35	62.7
NP_707428.1\|1579606_1580656_-	bacteriophage protein	U5P0K4	Shigella_phage	9.4e-108	54.2
NP_707429.2\|1581002_1581251_-	hypothetical protein	NA	NA	NA	NA
YP_008439251.1\|1581471_1581627_-	regulatory protein	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
NP_707430.1\|1581698_1581986_-	hypothetical protein	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
NP_707431.1\|1581985_1582225_-	bifunctional antitoxin/transcriptional repressor RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
NP_707432.1\|1582551_1583265_-\|integrase	insertion sequence element IS600 integrase core domain-containing protein	A0A0P0I4A4	Acinetobacter_phage	8.4e-60	47.7
NP_707433.1\|1583405_1583708_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707434.1\|1583808_1584789_+	low-affinity transport protein	NA	NA	NA	NA
NP_707435.1\|1584877_1586338_+	oxidoreductase	H8ZJP8	Ostreococcus_tauri_virus	1.1e-42	29.6
NP_707436.1\|1586373_1586577_-	hypothetical protein	J9Q802	Salmonella_phage	1.6e-11	55.2
NP_707438.2\|1587529_1588276_-	malonic semialdehyde reductase	NA	NA	NA	NA
NP_707439.2\|1588412_1590458_+	dipeptidyl carboxypeptidase II	NA	NA	NA	NA
NP_707440.1\|1590502_1591021_-	hypothetical protein	NA	NA	NA	NA
NP_707441.1\|1591924_1592743_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9
NP_707442.1\|1593210_1594329_-	transporter	NA	NA	NA	NA
NP_707443.4\|1594691_1595492_+	insertion element IS1 protein InsB	NA	NA	NA	NA
NP_707444.1\|1595522_1595741_-	hypothetical protein	NA	NA	NA	NA
NP_707445.2\|1595772_1596156_-	DNA-binding transcriptional activator MarA	D0R0F8	Streptococcus_phage	4.7e-09	32.3
NP_707446.4\|1596175_1596553_-	multiple antibiotic resistance protein	NA	NA	NA	NA
NP_707447.1\|1596821_1597487_+	hypothetical protein	NA	NA	NA	NA
NP_707449.1\|1598851_1599967_-	hypothetical protein	NA	NA	NA	NA
NP_707450.1\|1601045_1601972_+	glutaminase	NA	NA	NA	NA
NP_707452.2\|1602940_1603888_+	hypothetical protein	A0A127AWB9	Bacillus_phage	7.3e-19	37.5
NP_707453.1\|1604114_1605566_+	altronate oxidoreductase	NA	NA	NA	NA
NP_707455.1\|1607070_1607259_-	hypothetical protein	NA	NA	NA	NA
NP_707456.1\|1607408_1608374_+	hypothetical protein	NA	NA	NA	NA
NP_707457.1\|1608377_1609136_-	trans-aconitate 2-methyltransferase	NA	NA	NA	NA
NP_707458.1\|1609175_1609466_-	autoinducer-2 (AI-2) modifying protein LsrG	NA	NA	NA	NA
NP_707459.1\|1609489_1610260_-	autoinducer 2 aldolase	NA	NA	NA	NA
NP_707460.3\|1610284_1611124_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	2.5e-164	98.6
NP_707462.1\|1612683_1613637_-	transcriptional regulator LsrR	NA	NA	NA	NA
NP_707463.1\|1613885_1615421_+	autoinducer 2 ABC transporter ATP-binding protein LsrA	A0A2H4PQG7	Staphylococcus_phage	9.8e-21	30.4
NP_707464.1\|1615414_1616443_+	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA
NP_707465.1\|1616442_1617435_+	autoinducer 2 import system permease LsrD	NA	NA	NA	NA
NP_707466.3\|1618639_1619050_+	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_707467.3\|1619098_1619923_+\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	5.9e-158	96.4
NP_707468.1\|1619972_1620785_-	hypothetical protein	U5P429	Shigella_phage	3.6e-147	92.6
NP_707469.1\|1620841_1621126_-	hypothetical protein	U5P4I9	Shigella_phage	4.6e-33	92.5
NP_707470.1\|1621196_1622411_-	bifunctional D-altronate/D-mannonate dehydratase	Q6A202	Oenococcus_phage	2.4e-46	29.0
NP_707471.2\|1622616_1622943_-	hypothetical protein	A0A218MNG8	uncultured_virus	7.6e-24	55.6
NP_707472.1\|1623077_1623419_+	hypothetical protein	NA	NA	NA	NA
NP_707473.4\|1624016_1624763_-	hypothetical protein	NA	NA	NA	NA
NP_707474.2\|1624834_1625140_+	hypothetical protein	NA	NA	NA	NA
NP_707477.2\|1627482_1628472_-	hypothetical protein	NA	NA	NA	NA
NP_707478.1\|1628556_1629048_-	hypothetical protein	NA	NA	NA	NA
NP_707479.2\|1629368_1629869_-	hypothetical protein	NA	NA	NA	NA
NP_707480.2\|1629858_1630374_-	hypothetical protein	NA	NA	NA	NA
NP_707481.1\|1630804_1631173_-	hypothetical protein	NA	NA	NA	NA
NP_707482.1\|1631584_1632070_-\|integrase	integrase	NA	NA	NA	NA
1632006:1632022	attL	NA	NA	NA	NA
NP_707483.1\|1632141_1632981_-\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_707483.1\|1632141_1632981_-\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
1639804:1639820	attR	NA	NA	NA	NA

DBSCAN-SWA_12

1802877 : 1892711

Shigella_phage(26.92%)

transposase,protease,integrase,tRNA

attL 1810908:1810922|attR 1879274:1879674

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_707628.1\|1802877_1804065_+\|transposase	insertion sequence IS91 transposase	NA	NA	NA	NA
NP_707629.1\|1804335_1805058_-	colanic acid/biofilm transcriptional regulator	NA	NA	NA	NA
NP_707630.1\|1805162_1806359_-	oxidoreductase	NA	NA	NA	NA
NP_707631.1\|1806395_1807301_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	1.7e-177	99.0
NP_707632.3\|1807258_1807669_-	IS2 repressor TnpA	Q76S41	Shigella_phage	5.4e-59	99.2
NP_707633.2\|1807782_1808301_+	resistance protein	NA	NA	NA	NA
NP_707634.1\|1808297_1808747_+	hypothetical protein	NA	NA	NA	NA
NP_707635.1\|1808747_1808981_-	hypothetical protein	NA	NA	NA	NA
NP_707636.1\|1809066_1809315_-	hypothetical protein	NA	NA	NA	NA
NP_707637.1\|1809931_1810741_-	acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	5.9e-17	41.0
1810908:1810922	attL	NA	NA	NA	NA
NP_707638.1\|1810950_1812375_-	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
1810908:1810922	attL	NA	NA	NA	NA
NP_707639.1\|1812396_1813191_-	ABC transporter permease	NA	NA	NA	NA
NP_707640.1\|1813870_1815217_+\|transposase	insertion sequence IS91 transposase	NA	NA	NA	NA
NP_707642.1\|1817789_1818383_-	tellurite resistance protein TehB	NA	NA	NA	NA
NP_707643.2\|1818379_1819372_-	potassium-tellurite ethidium and proflavin transporter	NA	NA	NA	NA
NP_707644.1\|1819495_1820476_+	hypothetical protein	NA	NA	NA	NA
NP_707645.2\|1820470_1821007_-	ribosomal-protein-L7/L12-serine acetyltransferase	NA	NA	NA	NA
NP_707646.2\|1821069_1821237_-	hypothetical protein	NA	NA	NA	NA
NP_707648.1\|1821433_1823089_-	glucan biosynthesis protein D	NA	NA	NA	NA
NP_707649.1\|1823313_1824657_-	hypothetical protein	NA	NA	NA	NA
NP_707650.1\|1824732_1825797_+	LysR family transcriptional regulator	NA	NA	NA	NA
NP_707651.1\|1825834_1827475_-	methyl-accepting chemotaxis protein III	NA	NA	NA	NA
NP_707652.1\|1827850_1828333_+	insertion element IS150 protein	A0A2I6AZV8	Macacine_betaherpesvirus	1.1e-76	99.3
NP_707653.1\|1828329_1829148_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9
YP_008439253.1\|1829183_1829486_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
YP_008439254.1\|1829860_1830010_+	protein HokB	NA	NA	NA	NA
NP_707655.1\|1830081_1830255_-	hypothetical protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
NP_707656.3\|1830499_1831066_-	cytochrome b(561)	A0A0U2QLA7	Escherichia_phage	3.4e-19	44.9
NP_707657.1\|1831218_1831971_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
NP_707658.1\|1831967_1832219_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
NP_707659.1\|1832260_1833700_-	aldehyde dehydrogenase	NA	NA	NA	NA
NP_707660.1\|1834974_1835277_+\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	1.1e-45	100.0
NP_707661.1\|1835303_1836143_+\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_707662.1\|1836187_1836901_+\|integrase	insertion sequence element IS600 integrase core domain-containing protein	A0A0P0I4A4	Acinetobacter_phage	2.9e-60	47.3
1836753:1836767	attR	NA	NA	NA	NA
NP_707663.2\|1837101_1840947_-	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
1836753:1836767	attR	NA	NA	NA	NA
NP_707664.1\|1841204_1841810_+	azoreductase	NA	NA	NA	NA
YP_008439255.1\|1841863_1842472_-	phosphatase	NA	NA	NA	NA
NP_707665.1\|1842572_1842875_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707666.1\|1842910_1843729_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.6e-65	44.9
NP_707667.1\|1843769_1844480_-	hypothetical protein	NA	NA	NA	NA
NP_707668.1\|1844430_1846188_-	hypothetical protein	NA	NA	NA	NA
NP_707670.2\|1847098_1847704_-	hypothetical protein	NA	NA	NA	NA
NP_707671.3\|1847874_1850184_-	hypothetical protein	NA	NA	NA	NA
NP_707672.1\|1850297_1850801_+	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	9.1e-85	93.2
NP_707673.1\|1851237_1852227_-	fermentative D-lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	3.3e-70	44.0
NP_707674.1\|1852434_1855074_+	hypothetical protein	NA	NA	NA	NA
NP_707675.1\|1855070_1855256_+	hypothetical protein	NA	NA	NA	NA
NP_707676.2\|1855260_1855590_+	hypothetical protein	NA	NA	NA	NA
NP_707677.1\|1856041_1856317_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_707678.1\|1856343_1856739_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_707679.1\|1856871_1857234_-	hypothetical protein	NA	NA	NA	NA
NP_707680.1\|1857410_1860935_+	oxidoreductase, Fe-S subunit	NA	NA	NA	NA
NP_707682.2\|1862499_1863006_+	universal stress protein F	A0A1W6JNV4	Morganella_phage	1.2e-28	52.8
NP_707683.1\|1863181_1864117_+\|tRNA	tRNA 2-thiocytidine biosynthesis protein TtcA	A0A0U2S5Z2	Escherichia_phage	3.2e-144	97.3
NP_707684.2\|1864245_1865613_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.2e-51	33.1
NP_707685.1\|1866090_1867074_-	zinc transporter	NA	NA	NA	NA
NP_707686.1\|1869398_1870853_-	multidrug resistant protein-like protein	NA	NA	NA	NA
NP_707687.1\|1871357_1871546_+	hypothetical protein	NA	NA	NA	NA
NP_707688.1\|1871555_1872755_+\|transposase	IS1294 transposase	NA	NA	NA	NA
NP_707689.3\|1873662_1874478_+	hypothetical protein	NA	NA	NA	NA
YP_008439256.1\|1874807_1875011_+	hypothetical protein	NA	NA	NA	NA
NP_707690.1\|1875021_1875537_+	O-6-alkylguanine-DNA:cysteine-protein methyltransferase	M1PFU9	Streptococcus_phage	1.1e-24	42.8
NP_707691.2\|1875731_1876484_+	fumarate/nitrate reduction transcriptional regulator	NA	NA	NA	NA
NP_707692.2\|1876635_1877586_+	universal stress protein UspE	NA	NA	NA	NA
NP_707693.1\|1878092_1878932_-\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_707694.1\|1878958_1879261_-\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	1.1e-45	100.0
NP_707695.1\|1879388_1880420_+	hypothetical protein	NA	NA	NA	NA
NP_707696.1\|1880470_1882105_-	transport protein	NA	NA	NA	NA
NP_707697.1\|1882951_1883254_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707700.1\|1884173_1884500_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	2.5e-51	93.5
NP_707701.1\|1884584_1885403_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	3.4e-65	44.9
NP_707703.1\|1887236_1887578_-	hypothetical protein	NA	NA	NA	NA
NP_707704.1\|1888466_1888841_-	hypothetical protein	NA	NA	NA	NA
NP_707705.2\|1888979_1889210_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
NP_707706.2\|1889991_1890654_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	3.5e-07	41.6
NP_707707.1\|1890650_1892711_-\|protease	protease 2	NA	NA	NA	NA

DBSCAN-SWA_13

1912620 : 1962809

Enterobacteria_phage(40.0%)

tail,tRNA,transposase,integrase,protease

attL 1944799:1944858|attR 1962445:1962845

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_707725.1\|1912620_1914393_-\|tRNA	aspartyl-tRNA synthetase	NA	NA	NA	NA
NP_707726.1\|1915148_1916345_+\|transposase	insertion sequence element ISSfl2 transposase	NA	NA	NA	NA
NP_707727.1\|1917073_1917322_+	bacteriophage protein	K7PLW4	Enterobacteria_phage	4.1e-38	98.8
NP_707728.1\|1917921_1919673_+	invasion plasmid antigen	NA	NA	NA	NA
NP_707729.1\|1919852_1920476_-\|tail	prophage CP-933K tail protein	A0A0U2QQK4	Escherichia_phage	5.1e-77	75.9
NP_707731.1\|1921901_1922501_-	membrane protein	H6WZM8	Escherichia_phage	1.8e-103	93.0
NP_707732.1\|1922568_1926048_-	host specificity protein	A5LH43	Enterobacteria_phage	0.0e+00	87.3
NP_707733.2\|1926108_1926651_-\|tail	phage tail protein	A0A291AWV5	Escherichia_phage	3.7e-76	84.1
NP_707734.2\|1926647_1927247_-\|tail	tail assembly protein	K7PLW1	Enterobacteria_phage	6.1e-120	97.0
NP_707735.1\|1927395_1928094_-\|tail	minor tail protein	A0A0K2FJ01	Enterobacteria_phage	8.4e-121	89.7
NP_707736.1\|1928093_1928423_-\|tail	minor tail protein	A5LH39	Enterobacteria_phage	2.4e-57	97.2
NP_707737.1\|1928422_1931464_-\|tail	tail length tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	86.5
NP_707738.2\|1931435_1931711_-\|tail	prophage CP-933K tail protein	A5LH37	Enterobacteria_phage	2.9e-45	98.9
NP_707739.2\|1931773_1932160_-\|tail	prophage CP-933K tail protein	A5LH36	Enterobacteria_phage	1.4e-61	92.2
NP_707740.2\|1932218_1932959_-\|tail	prophage CP-933K tail protein	A5LH35	Enterobacteria_phage	1.5e-128	96.7
NP_707741.1\|1932969_1933371_-\|tail	prophage CP-933K tail protein	A0A291AWY2	Escherichia_phage	1.6e-71	97.7
NP_707742.1\|1933367_1933958_-\|tail	prophage CP-933K tail protein	A5LH33	Enterobacteria_phage	7.4e-78	78.2
NP_707743.1\|1933944_1934316_-\|tail	tail attachment protein	NA	NA	NA	NA
NP_707744.1\|1934327_1934729_-	DNA-packaging protein	A0A2R9YJP4	Escherichia_phage	3.3e-37	66.2
NP_707745.1\|1934992_1936189_+\|transposase	insertion sequence element ISSfl2 transposase	NA	NA	NA	NA
NP_707746.2\|1937374_1938064_-	Q antiterminator encoded by prophage CP-933P	I6PDF8	Cronobacter_phage	2.9e-57	49.4
NP_707747.1\|1938060_1938420_-	crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	8.3e-40	66.1
NP_707748.1\|1938623_1938926_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707749.1\|1938961_1939780_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	4.5e-65	44.9
NP_707750.2\|1940292_1940796_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	1.5e-95	100.0
NP_707752.1\|1941075_1941903_+\|protease	serine protease	Q8W654	Enterobacteria_phage	8.7e-125	94.2
NP_707753.2\|1941946_1942696_+	bacteriophage protein	A0A1B5FPC0	Escherichia_phage	1.7e-135	96.0
NP_707754.1\|1942692_1943262_+	bacteriophage protein	A0A088C4R7	Shewanella_sp._phage	6.8e-28	39.4
YP_008439258.1\|1943385_1943628_+	hypothetical protein	Q6H9Z8	Enterobacteria_phage	6.2e-31	85.0
NP_707755.1\|1943958_1944798_-\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
1944799:1944858	attL	NA	NA	NA	NA
NP_707756.1\|1944824_1945163_-\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
NP_707757.2\|1945759_1946155_+	hypothetical protein	NA	NA	NA	NA
NP_707758.1\|1946195_1946939_+\|tRNA	tRNA cmo(5)U34 methyltransferase	F5B419	Synechococcus_phage	4.6e-24	30.0
NP_707759.1\|1946935_1947907_+\|tRNA	tRNA mo(5)U34 methyltransferase	NA	NA	NA	NA
NP_707760.2\|1948071_1950501_-	biotin sulfoxide reductase	NA	NA	NA	NA
NP_707761.2\|1950525_1951626_-	cytochrome C-type protein	NA	NA	NA	NA
NP_707762.3\|1952013_1952760_-	copper homeostasis protein	NA	NA	NA	NA
NP_707763.2\|1952773_1953340_-	hypothetical protein	NA	NA	NA	NA
NP_707764.1\|1953555_1955289_+\|tRNA	arginyl-tRNA synthetase	A0A2K9L6Z2	Tupanvirus	6.8e-87	33.7
NP_707765.1\|1955465_1955954_+	hypothetical protein	NA	NA	NA	NA
NP_707768.1\|1957042_1957369_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	2.3e-52	94.4
NP_707769.2\|1957420_1957759_-	flagellar protein FlhE	NA	NA	NA	NA
NP_707770.1\|1959782_1960976_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA
NP_707771.1\|1961604_1962444_-\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_707772.1\|1962470_1962809_-\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
1962445:1962845	attR	NA	NA	NA	NA

DBSCAN-SWA_14

2030313 : 2087783

Enterobacteria_phage(27.78%)

lysis,transposase,integrase,tail

attL 2051095:2051154|attR 2095727:2096472

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_707843.1\|2030313_2030784_-	DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	7.6e-33	47.6
NP_707844.1\|2030764_2032183_-	DNA cytosine methylase	E5E3X6	Burkholderia_phage	1.0e-101	55.1
NP_707845.1\|2033087_2033900_-	hypothetical protein	U5P429	Shigella_phage	3.6e-147	92.6
NP_707846.1\|2033956_2034241_-	hypothetical protein	U5P4I9	Shigella_phage	4.6e-33	92.5
NP_707847.1\|2034261_2035110_+	outer membrane pore protein	Q1MVN1	Enterobacteria_phage	1.6e-65	52.5
NP_707848.1\|2035080_2035986_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	1.7e-177	99.3
NP_707849.3\|2035943_2036354_-	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_707850.1\|2037209_2037485_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_707851.1\|2037511_2037907_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.0e-66	92.4
NP_707852.1\|2037952_2038804_+	chaperone protein HchA	NA	NA	NA	NA
NP_707853.1\|2038911_2040270_-	2-component sensor protein	NA	NA	NA	NA
NP_707854.2\|2040269_2040941_-	transcriptional regulatory protein YedW	W8CYM9	Bacillus_phage	5.4e-32	35.2
NP_707855.1\|2041073_2041487_+	5-hydroxyisourate hydrolase	NA	NA	NA	NA
NP_707856.1\|2042600_2043236_+	sulfite oxidase subunit YedZ	NA	NA	NA	NA
NP_707857.1\|2043493_2044144_+	zinc/cadmium-binding protein	NA	NA	NA	NA
YP_008439260.1\|2045221_2045491_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-19	81.7
NP_707858.1\|2045547_2046216_+	hypothetical protein	NA	NA	NA	NA
NP_707859.1\|2047251_2048460_+\|transposase	insertion element iso-IS10R transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
NP_707860.2\|2049692_2050307_-	hypothetical protein	A0A0U2QQK4	Escherichia_phage	1.5e-68	81.0
NP_707861.2\|2050212_2051031_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	6.5e-64	44.9
2051095:2051154	attL	NA	NA	NA	NA
NP_707862.1\|2051321_2051825_+	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	9.1e-85	93.2
NP_707863.1\|2051917_2052400_-	hypothetical protein	NA	NA	NA	NA
NP_707864.1\|2052467_2054417_-\|tail	tail protein	Q8W620	Enterobacteria_phage	0.0e+00	98.2
NP_707865.1\|2054501_2054837_-	bacteriophage protein	Q8W621	Enterobacteria_phage	9.8e-51	97.2
NP_707866.1\|2054836_2055193_-	bacteriophage protein	Q8W622	Enterobacteria_phage	5.3e-63	98.3
NP_707867.1\|2055192_2056689_-	sheath protein	Q8W623	Enterobacteria_phage	5.9e-273	97.4
NP_707869.1\|2057240_2058059_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.4e-63	44.5
NP_707870.1\|2058094_2058397_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707872.1\|2059295_2059643_-	insertion sequence element ISSfl4 ORF2	A0A0P0ZDM8	Stx2-converting_phage	2.7e-43	72.9
NP_707873.1\|2059639_2060314_-\|transposase	insertion sequence element ISSfl4 transposase	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
NP_707874.1\|2060412_2060628_-\|lysis	lysis protein S	M1FN85	Enterobacteria_phage	5.3e-34	98.6
NP_707875.2\|2061428_2062112_-	Q antiterminator of prophage	I6PDF8	Cronobacter_phage	2.0e-58	49.8
NP_707876.1\|2062108_2062474_-	crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	7.1e-39	68.1
NP_707877.2\|2062474_2063461_-	bacteriophage protein	U5P0K4	Shigella_phage	4.4e-83	48.5
NP_707878.1\|2063534_2063813_-	hypothetical protein	I6PCV7	Cronobacter_phage	4.5e-09	45.0
YP_008439261.1\|2063615_2063939_+	hypothetical protein	NA	NA	NA	NA
YP_008439262.1\|2063980_2064193_-	regulatory protein	A0A0U2QV81	Escherichia_phage	6.6e-29	95.7
YP_008439263.1\|2064395_2064614_-	membrane protein	NA	NA	NA	NA
NP_707879.2\|2064787_2065123_-	bacteriophage protein	A0A076GCN9	Escherichia_phage	1.2e-24	72.0
NP_707881.1\|2066592_2067429_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
NP_707884.1\|2069135_2069975_-\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_707885.1\|2070001_2070340_-\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
NP_707886.1\|2070930_2071233_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707887.1\|2071268_2072060_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	1.5e-57	42.3
NP_707888.2\|2072411_2073866_+	AMP nucleosidase	NA	NA	NA	NA
NP_707889.1\|2074208_2074925_+	hypothetical protein	NA	NA	NA	NA
NP_707890.1\|2077301_2078252_-	transcriptional regulator Cbl	NA	NA	NA	NA
NP_707891.2\|2078353_2079271_-	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA
NP_707892.1\|2079730_2080666_-	L,D-transpeptidase	NA	NA	NA	NA
NP_707893.1\|2080727_2081807_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
NP_707894.2\|2081818_2082562_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
NP_707895.1\|2082558_2083068_-	adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase	NA	NA	NA	NA
NP_707896.1\|2083079_2083898_-	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.9e-64	44.9
NP_707897.1\|2083933_2084236_-\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_707898.1\|2084478_2084805_+	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	1.3e-52	95.4
NP_707899.1\|2085019_2085688_+\|integrase	insertion sequence element IS629 integrase core domain-containing protein	Q6H9S3	Enterobacteria_phage	4.0e-120	98.2
NP_707900.1\|2085909_2086392_+	hypothetical protein	NA	NA	NA	NA
NP_707901.1\|2086550_2086946_-	hypothetical protein	NA	NA	NA	NA
NP_707902.1\|2087162_2087783_+\|integrase	insertion sequence element IS629 integrase core domain-containing protein	Q6H9S3	Enterobacteria_phage	6.3e-112	98.1
2095727:2096472	attR	NA	NA	NA	NA

DBSCAN-SWA_15

2115216 : 2121523

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_707933.1\|2115216_2115762_-	dTDP-6-deoxy-L-mannose-dehydrogenase	I7HJC4	Enterobacteria_phage	3.5e-50	57.3
NP_707934.1\|2115766_2116645_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.9e-106	64.1
NP_707935.1\|2116703_2117603_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.4e-29	35.6
NP_707936.1\|2117602_2118688_-	dTDP-glucose 4,6 dehydratase	I7HTA3	Enterobacteria_phage	5.7e-100	53.6
NP_707937.2\|2119060_2119954_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	1.3e-46	42.0
NP_707938.1\|2120128_2121523_-	colanic acid biosynthesis protein	A0A291LBB9	Klebsiella_phage	1.8e-18	30.9

DBSCAN-SWA_16

2149246 : 2240202

Escherichia_phage(32.26%)

transposase,protease,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_707961.1\|2149246_2150443_-\|transposase	insertion sequence element ISSfl2 transposase	NA	NA	NA	NA
NP_707962.1\|2153671_2154520_-	3-methyladenine DNA glycosylase	NA	NA	NA	NA
NP_707964.1\|2157954_2158716_-	hypothetical protein	NA	NA	NA	NA
NP_707965.2\|2158712_2159372_-	hypothetical protein	NA	NA	NA	NA
NP_707966.1\|2159805_2161002_+\|transposase	insertion sequence element ISSfl2 transposase	NA	NA	NA	NA
NP_707967.1\|2161003_2162056_+	acriflavin resistance protein AcrA-like protein	NA	NA	NA	NA
NP_707968.1\|2165178_2168244_+	multidrug efflux system subunit MdtC	NA	NA	NA	NA
NP_707969.1\|2168244_2169660_+	transporter	NA	NA	NA	NA
NP_707970.1\|2169656_2171060_+	signal transduction histidine-protein kinase BaeS	W8CYF6	Bacillus_phage	1.2e-33	29.4
NP_707971.1\|2171056_2171779_+	DNA-binding transcriptional regulator BaeR	W8CYM9	Bacillus_phage	3.7e-31	33.2
NP_707972.1\|2171930_2172302_+	hypothetical protein	NA	NA	NA	NA
NP_707973.2\|2172448_2173810_+\|protease	protease	Q6DW11	Phage_TP	7.1e-217	99.5
NP_707974.1\|2174151_2174529_-	hypothetical protein	NA	NA	NA	NA
NP_707975.1\|2174874_2175774_+	lipid kinase	A0A1V0SBJ0	Catovirus	5.7e-13	29.0
NP_707976.1\|2175855_2176635_-	galactitol utilization operon repressor	NA	NA	NA	NA
NP_707977.1\|2176734_2177775_-	galactitol-1-phosphate dehydrogenase	NA	NA	NA	NA
NP_707978.1\|2177807_2178203_-	insertion element IS1 protein InsB	NA	NA	NA	NA
NP_707979.1\|2178229_2178505_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	5.5e-44	92.3
NP_707980.1\|2178599_2179955_-	PTS system galactitol-specific transporter subunit IIC	NA	NA	NA	NA
NP_707981.1\|2179958_2180243_-	PTS system galactitol-specific transporter subunit IIB	NA	NA	NA	NA
NP_707982.1\|2180273_2180726_-	PTS system galactitol-specific transporter subunit IIA	NA	NA	NA	NA
NP_707983.1\|2180735_2181998_-	D-tagatose-1,6-bisphosphate aldolase subunit GatZ	NA	NA	NA	NA
NP_707984.2\|2182026_2182881_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA
NP_707985.1\|2183188_2184241_-	fructose-bisphosphate aldolase	NA	NA	NA	NA
NP_707986.1\|2185280_2186246_+	kinase	NA	NA	NA	NA
NP_707987.1\|2186690_2187899_+\|transposase	insertion element iso-IS10R transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
NP_707988.2\|2188351_2189173_-	hypothetical protein	D0R7H8	Paenibacillus_phage	1.4e-21	36.2
NP_707989.1\|2189237_2190038_-	bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase	NA	NA	NA	NA
NP_707990.1\|2190034_2190823_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
NP_707991.1\|2191045_2191318_-	transcriptional repressor RcnR	NA	NA	NA	NA
NP_707992.1\|2192488_2192827_+	hypothetical protein	NA	NA	NA	NA
NP_707993.1\|2193126_2193942_-	type-1 fimbrial protein	NA	NA	NA	NA
NP_707994.2\|2193957_2196438_-	fimbrial outer membrane usher protein	NA	NA	NA	NA
NP_707996.2\|2197135_2197639_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	1.5e-95	100.0
NP_707997.1\|2197984_2198509_-	fimbrial-like protein	NA	NA	NA	NA
NP_707998.1\|2198784_2199180_-	insertion element IS1 protein InsB	NA	NA	NA	NA
NP_707999.1\|2199206_2199482_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
YP_008439264.1\|2199578_2199860_-	hypothetical protein	NA	NA	NA	NA
NP_708000.2\|2200121_2201231_-	antiporter inner membrane protein	NA	NA	NA	NA
NP_708001.2\|2201362_2203396_+\|tRNA	methionyl-tRNA synthetase	A0A1V0SDF2	Indivirus	1.0e-54	27.8
NP_708002.1\|2203791_2204094_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA
NP_708003.1\|2204129_2204948_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	6.5e-64	44.5
NP_708004.1\|2205605_2205881_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	3.3e-44	92.3
NP_708005.1\|2205907_2206303_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.0e-66	92.4
NP_708006.1\|2213089_2213497_+	hypothetical protein	NA	NA	NA	NA
NP_708007.2\|2213972_2215127_+	hypothetical protein	NA	NA	NA	NA
NP_708008.2\|2215137_2217417_+	hypothetical protein	NA	NA	NA	NA
NP_708009.2\|2217409_2218546_+	hypothetical protein	Q9EYF7	Enterobacteria_phage	3.2e-162	97.4
NP_708010.2\|2218542_2220546_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.4
NP_708011.1\|2220678_2221152_-	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	4.3e-68	82.8
NP_708012.2\|2221436_2221898_+	hypothetical protein	Q9EYF5	Enterobacteria_phage	1.6e-75	99.3
NP_708013.1\|2222118_2222514_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_708014.1\|2222540_2222816_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_708015.1\|2222849_2223242_-	hypothetical protein	Q9EYF4	Enterobacteria_phage	3.9e-51	96.3
NP_708016.2\|2223231_2223951_-	two-component response-regulatory protein YehT	NA	NA	NA	NA
NP_708017.2\|2223947_2225633_-	2-component sensor protein	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
NP_708018.1\|2227583_2227832_+	DNA-damage-inducible protein	A5LH55	Enterobacteria_phage	4.1e-38	97.6
YP_008439265.1\|2227947_2228217_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-19	81.7
NP_708019.1\|2228273_2228942_+	hypothetical protein	NA	NA	NA	NA
NP_708020.1\|2229977_2231186_+\|transposase	insertion element iso-IS10R transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
NP_708021.3\|2232418_2232928_-	bacteriophage protein	A0A0U2QQK4	Escherichia_phage	2.4e-69	78.2
NP_708022.2\|2232972_2234262_-\|tail	tail fiber protein	Q8W611	Enterobacteria_phage	1.9e-73	42.4
NP_708023.1\|2234285_2234774_-\|tail	tail fiber assembly protein	Q8W612	Enterobacteria_phage	4.3e-63	76.0
NP_708025.1\|2235288_2235564_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_708026.1\|2235590_2235986_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	5.7e-66	91.6
NP_708027.1\|2236684_2237011_+	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	1.3e-52	95.4
NP_708029.1\|2238539_2239271_-	transport system permease	NA	NA	NA	NA
NP_708030.1\|2239275_2240202_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.7e-24	34.6

DBSCAN-SWA_17

2616390 : 2623522

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_708342.1\|2616390_2617209_+	insertion sequence element IS600 protein	A0A0P0I4A4	Acinetobacter_phage	2.5e-63	44.5
YP_008439271.1\|2618569_2618722_-	hypothetical protein	G9L6F3	Escherichia_phage	1.7e-18	96.0
NP_708343.1\|2618739_2618931_+	hypothetical protein	G9L6F2	Escherichia_phage	7.3e-27	100.0
NP_708344.1\|2619241_2619760_+	outer membrane lipoprotein	G9L6F1	Escherichia_phage	6.5e-62	99.4
NP_708345.1\|2619775_2620315_+	hypothetical protein	G9L6F0	Escherichia_phage	1.4e-43	98.9
NP_708346.1\|2620409_2621987_-	GMP synthase	NA	NA	NA	NA
NP_708347.2\|2622055_2623522_-	inosine 5'-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.3e-88	39.1

DBSCAN-SWA_18

2863088 : 2869287

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_708570.1\|2863088_2863592_+	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	9.1e-85	93.2
NP_708571.1\|2863630_2864302_-	7-carboxy-7-deazaguanine synthase QueE	A0A2I7S8X1	Vibrio_phage	1.7e-14	25.0
NP_708572.1\|2864695_2864971_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_708573.1\|2864997_2865393_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_708575.1\|2866263_2867562_-	enolase	A0A1X9I5Z8	Streptococcus_phage	2.0e-131	58.8
NP_708576.1\|2867649_2869287_-	CTP synthetase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.8e-153	50.4

DBSCAN-SWA_19

2882000 : 2957516

Bacillus_phage(11.76%)

transposase,protease,integrase,tRNA

attL 2950032:2950048|attR 2957651:2957667

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_708585.1\|2882000_2882783_-\|tRNA	tRNA pseudouridine synthase C	NA	NA	NA	NA
NP_708586.1\|2882782_2883112_-	hypothetical protein	NA	NA	NA	NA
NP_708587.1\|2883733_2884279_-	SecY interacting protein Syd	NA	NA	NA	NA
NP_708588.1\|2884346_2885195_+	7-cyano-7-deazaguanine reductase	A0A2I7SAX1	Vibrio_phage	4.7e-41	37.1
NP_708589.1\|2885306_2886671_+	hypothetical protein	NA	NA	NA	NA
NP_708590.1\|2886754_2888101_+\|transposase	insertion sequence IS4 transposase InsG	NA	NA	NA	NA
NP_708591.1\|2888664_2889954_+	serine transporter	NA	NA	NA	NA
NP_708592.1\|2890011_2891379_+	L-serine dehydratase	NA	NA	NA	NA
NP_708593.1\|2891399_2892245_+	flap endonuclease-like protein	F8WQ40	Bacillus_phage	5.6e-10	33.5
NP_708594.2\|2892297_2893446_-	L-1,2-propanediol oxidoreductase	NA	NA	NA	NA
NP_708595.1\|2893473_2894121_-	L-fuculose phosphate aldolase	NA	NA	NA	NA
NP_708596.1\|2894667_2895984_+	L-fucose transporter	NA	NA	NA	NA
NP_708597.1\|2896016_2897792_+	L-fucose isomerase	NA	NA	NA	NA
NP_708598.1\|2899321_2899744_+	L-fucose mutarotase	NA	NA	NA	NA
NP_708599.2\|2899801_2900533_+	DNA-binding transcriptional activator FucR	NA	NA	NA	NA
NP_708600.1\|2900576_2901677_-	23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM	NA	NA	NA	NA
NP_708601.1\|2901669_2902065_-	hypothetical protein	NA	NA	NA	NA
NP_708602.1\|2902083_2903001_-	DNA-binding transcriptional activator GcvA	NA	NA	NA	NA
NP_708603.1\|2903351_2903582_-	hypothetical protein	NA	NA	NA	NA
NP_708604.2\|2903770_2904976_+	cysteine sulfinate desulfinase	Q2XUY6	environmental_halophage	2.5e-72	36.8
NP_708605.1\|2904975_2905419_+	CsdA-binding activator	NA	NA	NA	NA
NP_708606.1\|2905469_2906276_-	sulfur acceptor protein CsdL	S4VW33	Pandoravirus	1.7e-16	33.3
NP_708607.2\|2906513_2907611_-	murein transglycosylase A	NA	NA	NA	NA
NP_708608.1\|2908080_2909424_-	amidase	Q5YA51	Bacillus_phage	2.4e-15	28.6
NP_708609.2\|2909565_2910897_+	N-acetylglutamate synthase	NA	NA	NA	NA
NP_708610.1\|2910958_2912785_-	exonuclease V subunit alpha	A0A1P8DII4	Virus_Rctr197k	2.3e-24	27.5
NP_708611.2\|2912784_2916327_-	exonuclease V subunit beta	G3MA40	Bacillus_virus	1.2e-08	21.8
NP_708612.1\|2916319_2919208_-\|protease	protease3	A0A1V0SJA4	Klosneuvirus	2.4e-68	26.0
NP_708613.1\|2919383_2922752_-	exonuclease V subunit gamma	NA	NA	NA	NA
NP_708614.2\|2922764_2923115_-	hypothetical protein	NA	NA	NA	NA
NP_708615.4\|2923099_2923465_-	hypothetical protein	NA	NA	NA	NA
YP_008439276.1\|2923503_2924067_-	hypothetical protein	NA	NA	NA	NA
NP_708616.1\|2924721_2925516_-	thymidylate synthase	A6M9A2	Geobacillus_virus	9.9e-118	70.5
NP_708617.1\|2925522_2926398_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
NP_708618.1\|2926548_2928795_-	fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain containing protein	A0A1V0SGR7	Hokovirus	2.7e-11	26.2
NP_708619.1\|2928807_2929338_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
NP_708620.1\|2930022_2930712_+	DNA mismatch repair protein	NA	NA	NA	NA
NP_708621.1\|2930780_2931494_+	transporter	A0A0R6PEZ3	Moraxella_phage	2.0e-45	47.3
NP_708622.1\|2931631_2931850_+	hypothetical protein	NA	NA	NA	NA
NP_708623.1\|2931957_2932998_+	aldo/keto reductase	NA	NA	NA	NA
NP_708624.1\|2933030_2934221_-	lysophospholipid transporter LplT	NA	NA	NA	NA
NP_708625.1\|2934213_2936373_-	bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase	NA	NA	NA	NA
NP_708626.1\|2936958_2937990_+	DNA-binding transcriptional regulator GalR	NA	NA	NA	NA
NP_708627.1\|2937996_2939259_-	diaminopimelate decarboxylase	NA	NA	NA	NA
NP_708628.1\|2939380_2940316_+	LysR family transcriptional regulator	NA	NA	NA	NA
NP_708629.1\|2940302_2940995_-	racemase	NA	NA	NA	NA
NP_708630.2\|2941123_2942542_-	low-affinity L-arabinose transport system proton symport protein	O13311	Aichi_virus	1.3e-24	26.9
NP_708631.1\|2942856_2943618_-	2-deoxy-D-gluconate 3-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	5.9e-19	31.7
NP_708632.1\|2943647_2944484_-	5-keto-4-deoxyuronate isomerase	NA	NA	NA	NA
NP_708633.2\|2944770_2945952_-	acyltransferase	NA	NA	NA	NA
NP_708635.1\|2948061_2948370_+\|transposase	insertion sequence IS3 transposase InsE	NA	NA	NA	NA
NP_708636.1\|2948366_2949233_+\|transposase	insertion sequence IS3A transposase InsF	A0A0P0I4A4	Acinetobacter_phage	3.0e-51	40.6
NP_708637.1\|2949246_2949840_-	hypothetical protein	NA	NA	NA	NA
2950032:2950048	attL	NA	NA	NA	NA
NP_708638.1\|2950471_2951461_-	hypothetical protein	NA	NA	NA	NA
NP_708639.1\|2951544_2952036_-	hypothetical protein	NA	NA	NA	NA
NP_708640.1\|2952333_2953080_-	hypothetical protein	B5AX29	Iodobacteriophage	4.7e-13	38.9
NP_708641.1\|2953441_2953780_+\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
NP_708644.2\|2955454_2955787_-	hypothetical protein	NA	NA	NA	NA
NP_708645.1\|2955905_2957516_-\|integrase	integrase	A0A059XK29	uncultured_phage	2.3e-12	28.4
2957651:2957667	attR	NA	NA	NA	NA

DBSCAN-SWA_20

2962747 : 2969979

Shigella_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_708650.1\|2962747_2963023_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	3.3e-44	92.3
NP_708651.1\|2963257_2964163_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	7.4e-178	99.3
NP_708652.3\|2964120_2964531_-	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_708653.1\|2965212_2966730_+	permease	Q9KX94	Enterobacteria_phage	3.2e-24	26.3
NP_708654.1\|2966979_2967528_+	isopentenyl-diphosphate delta-isomerase	NA	NA	NA	NA
NP_708655.1\|2967570_2969088_-\|tRNA	lysyl-tRNA synthetase	A0A1V0SAC0	Catovirus	5.9e-87	36.7
YP_008439277.1\|2969097_2969979_-	peptide chain release factor	A0A0S4KWG0	Pseudomonas_phage	1.5e-05	39.0

DBSCAN-SWA_21

3015836 : 3080843

Escherichia_phage(25.0%)

transposase,protease,integrase,tRNA

attL 3025625:3025640|attR 3070770:3070785

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_708698.1\|3015836_3016745_+\|protease	serine protease	A0A2C9D0H9	Yersinia_phage	1.2e-53	55.7
NP_708699.2\|3016790_3018782_-	transketolase	NA	NA	NA	NA
NP_708700.2\|3018933_3019818_+	hypothetical protein	NA	NA	NA	NA
NP_708701.1\|3020023_3020944_-	agmatinase	NA	NA	NA	NA
NP_708702.2\|3021079_3021454_-	hypothetical protein	NA	NA	NA	NA
NP_708703.1\|3021479_3021875_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	6.3e-65	90.8
NP_708704.1\|3021901_3022177_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	3.3e-44	92.3
NP_708705.1\|3022205_3024212_-	arginine decarboxylase	NA	NA	NA	NA
NP_708706.1\|3024208_3024355_-	hypothetical protein	NA	NA	NA	NA
YP_008439278.1\|3024687_3024939_-	membrane protein	NA	NA	NA	NA
NP_708707.2\|3024994_3026149_+	S-adenosylmethionine synthetase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
3025625:3025640	attL	NA	NA	NA	NA
NP_708708.2\|3026624_3027980_+	MFS family galactose:proton symporter	NA	NA	NA	NA
NP_708709.1\|3028056_3028554_+	hypothetical protein	NA	NA	NA	NA
NP_708710.2\|3028648_3029356_+	DNA-specific endonuclease I	NA	NA	NA	NA
NP_708711.2\|3029435_3030167_+	16S ribosomal RNA methyltransferase RsmE	NA	NA	NA	NA
NP_708712.1\|3030179_3031130_+	glutathione synthetase	NA	NA	NA	NA
NP_708713.3\|3031166_3031802_+	hypothetical protein	NA	NA	NA	NA
NP_708714.1\|3031801_3032218_+	Holliday junction resolvase-like protein	NA	NA	NA	NA
NP_708715.2\|3032393_3033419_-	transporter	NA	NA	NA	NA
NP_708716.1\|3033391_3034096_+	hypothetical protein	NA	NA	NA	NA
NP_708717.1\|3034113_3034680_+	resistance protein	NA	NA	NA	NA
NP_708718.3\|3034664_3034967_+	hypothetical protein	NA	NA	NA	NA
NP_708719.1\|3034974_3035568_+	dITP/XTP pyrophosphatase	NA	NA	NA	NA
NP_708720.1\|3035560_3036697_+	HemN family oxidoreductase	NA	NA	NA	NA
NP_708723.2\|3038018_3038522_+	hypothetical protein	NA	NA	NA	NA
NP_708724.1\|3038544_3038940_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.0e-66	92.4
NP_708725.1\|3038966_3039242_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_708726.2\|3039298_3040600_+	hypothetical protein	NA	NA	NA	NA
NP_708727.2\|3040700_3041663_-	hypothetical protein	NA	NA	NA	NA
NP_708728.1\|3041779_3042826_-	L-asparaginase II	NA	NA	NA	NA
NP_708729.2\|3043001_3043718_-	hypothetical protein	NA	NA	NA	NA
NP_708730.3\|3043904_3044261_-	hypothetical protein	NA	NA	NA	NA
NP_708731.1\|3044230_3044950_-\|tRNA	tRNA (guanine-N(7)-)-methyltransferase	NA	NA	NA	NA
NP_708732.2\|3045110_3046163_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
NP_708733.1\|3046190_3046466_+	oxidative damage protection protein	NA	NA	NA	NA
NP_708734.1\|3046527_3047610_+	murein transglycosylase C	NA	NA	NA	NA
NP_708735.1\|3047763_3049068_+	nucleosides permease	NA	NA	NA	NA
NP_708736.2\|3049116_3051312_-	ornithine decarboxylase	NA	NA	NA	NA
NP_708737.1\|3051649_3052357_+	transporter	NA	NA	NA	NA
NP_708738.1\|3052735_3053998_+\|integrase	P4-type integrase	Q7M297	Enterobacteria_phage	9.3e-78	38.3
NP_708739.1\|3054450_3057966_+	superfamily I DNA helicase	NA	NA	NA	NA
YP_008439279.1\|3058999_3059248_-	hypothetical protein	NA	NA	NA	NA
NP_708741.2\|3059314_3060076_+	hypothetical protein	NA	NA	NA	NA
NP_708742.1\|3060436_3064294_+\|protease	serine protease	Q9LA58	Enterobacterial_phage	2.4e-225	38.3
NP_708744.1\|3065324_3065672_-	hypothetical protein	A0A0P0ZBS5	Stx2-converting_phage	2.6e-62	99.1
NP_708745.1\|3065797_3066304_+	hypothetical protein	NA	NA	NA	NA
NP_708746.1\|3066390_3067305_+	hypothetical protein	A0A0P0ZBS5	Stx2-converting_phage	4.2e-128	72.7
NP_708747.3\|3067736_3071855_-\|protease	serine protease	Q9LA54	Enterobacteria_phage	0.0e+00	45.8
3070770:3070785	attR	NA	NA	NA	NA
NP_708749.1\|3072582_3074091_-	reverse transcriptase-like protein	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
NP_708751.1\|3074519_3074771_+	hypothetical protein	NA	NA	NA	NA
NP_708753.1\|3075172_3075499_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	2.4e-54	97.2
NP_708754.1\|3075781_3076207_-	hypothetical protein	NA	NA	NA	NA
NP_708755.1\|3076203_3076587_-	hypothetical protein	NA	NA	NA	NA
NP_708756.1\|3076959_3077559_-	hypothetical protein	NA	NA	NA	NA
NP_708757.1\|3077716_3078925_-\|transposase	insertion element iso-IS10R transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
NP_708758.3\|3079568_3079979_+	IS2 repressor TnpA	Q76S41	Shigella_phage	1.1e-59	100.0
NP_708759.1\|3080054_3080843_+\|transposase	insertion element IS2 transposase InsD	Q9ZXG3	Shigella_phage	9.4e-153	99.2

DBSCAN-SWA_22

3173555 : 3180442

Shigella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_708849.1\|3173555_3174716_+	synthetase/amidase	B2ZXR7	Ralstonia_phage	1.0e-86	42.9
NP_708850.1\|3174753_3175569_-	LigB family dioxygenase	NA	NA	NA	NA
NP_708851.2\|3175684_3176458_+	zinc transporter ZupT	NA	NA	NA	NA
YP_008439283.1\|3176515_3176710_-	hypothetical protein	NA	NA	NA	NA
NP_708852.1\|3176946_3177600_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	4.9e-46	44.3
NP_708853.1\|3177913_3178264_+	hypothetical protein	NA	NA	NA	NA
NP_708854.3\|3178474_3178885_+	IS2 repressor TnpA	Q76S41	Shigella_phage	5.4e-59	99.2
NP_708855.1\|3178842_3179694_+\|transposase	insertion element IS2 transposase InsD	Q9ZXG3	Shigella_phage	6.1e-166	99.3
NP_708856.1\|3179744_3180020_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_708857.1\|3180046_3180442_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.0e-66	92.4

DBSCAN-SWA_23

3399223 : 3406237

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_709057.2\|3399223_3400108_+	methyltransferase	M4QNN5	Ostreococcus_lucimarinus_virus	2.4e-24	30.2
NP_709058.1\|3400164_3400392_+	hypothetical protein	NA	NA	NA	NA
NP_709059.1\|3400385_3400889_-	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	2.2e-83	92.5
NP_709060.1\|3400963_3401290_+	hypothetical protein	NA	NA	NA	NA
NP_709061.1\|3401318_3402344_+	substrate-binding transport protein	A0A1B1IT51	uncultured_Mediterranean_phage	9.9e-70	39.2
NP_709063.1\|3402972_3403368_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_709064.1\|3403394_3403670_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	3.3e-44	92.3
NP_709065.2\|3404367_3405471_+	transport system permease	NA	NA	NA	NA
NP_709066.1\|3405478_3406237_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.7e-30	37.7

DBSCAN-SWA_24

3604779 : 3611847

Shigella_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_709263.3\|3604779_3605190_+	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_709264.1\|3605147_3606053_+\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	3.4e-175	98.3
NP_709265.1\|3605977_3606865_-	outer membrane pore protein	Q1MVN1	Enterobacteria_phage	9.8e-66	51.9
NP_709266.1\|3606885_3607170_+	hypothetical protein	U5P4I9	Shigella_phage	4.6e-33	92.5
NP_709267.1\|3607226_3608039_+	hypothetical protein	U5P429	Shigella_phage	5.5e-148	93.0
NP_709268.1\|3608358_3608682_-	hypothetical protein	NA	NA	NA	NA
NP_709269.1\|3608756_3609260_+	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	5.0e-83	91.9
NP_709270.2\|3609888_3610806_-	substrate-binding transport protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.6e-66	38.8
NP_709271.1\|3610942_3611269_-	hypothetical protein	NA	NA	NA	NA
NP_709272.1\|3611343_3611847_+	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	9.1e-85	93.2

DBSCAN-SWA_25

3624248 : 3627980

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_709281.1\|3624248_3624644_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_709282.1\|3624670_3624946_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_709283.2\|3625016_3625346_+	hypothetical protein	A0A2H4J145	uncultured_Caudovirales_phage	2.6e-24	50.5
NP_709284.2\|3625399_3626689_+	arsenical pump membrane protein	A0A2H4J144	uncultured_Caudovirales_phage	4.6e-173	73.5
NP_709285.1\|3626701_3627127_+	arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.5e-51	70.7
NP_709286.1\|3627476_3627980_+	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	1.3e-83	92.5

DBSCAN-SWA_26

3777981 : 3784700

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_709410.1\|3777981_3778377_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	6.3e-65	90.8
NP_709411.1\|3778403_3778679_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_709412.1\|3778852_3780130_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
NP_709413.1\|3780137_3780617_+	phosphopantetheine adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	4.8e-27	42.0
NP_709414.2\|3780655_3781465_-	formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase	F8WPX6	Bacillus_phage	2.6e-25	32.2
NP_709415.1\|3781562_3781730_-	50S ribosomal protein L33	NA	NA	NA	NA
NP_709416.1\|3781750_3781987_-	50S ribosomal protein L28	NA	NA	NA	NA
NP_709417.4\|3782203_3782872_-	DNA repair protein	NA	NA	NA	NA
NP_709418.3\|3782971_3784264_+	flavoprotein	Q9HH70	Methanothermobacter_phage	4.5e-43	33.7
NP_709419.1\|3784241_3784700_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	Q2NP83	Xanthomonas_phage	1.1e-47	58.8

DBSCAN-SWA_27

3794829 : 3857671

Shigella_phage(29.41%)

transposase,protease,integrase,tRNA

attL 3792375:3792389|attR 3814713:3814727

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3792375:3792389	attL	NA	NA	NA	NA
NP_709431.1\|3794829_3795519_+\|tRNA	tRNA guanosine-2'-O-methyltransferase	NA	NA	NA	NA
NP_709432.2\|3795524_3797606_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
NP_709433.1\|3797639_3798845_-	glutamate transport protein	NA	NA	NA	NA
NP_709434.2\|3799124_3800516_+	transporter	H9YQ34	environmental_Halophage	1.4e-71	100.0
NP_709435.2\|3800636_3802346_+	hypothetical protein	NA	NA	NA	NA
NP_709436.1\|3802398_3804717_-	alpha-glucosidase	NA	NA	NA	NA
NP_709437.1\|3806768_3807980_+\|integrase	integrase	Q7M297	Enterobacteria_phage	4.2e-160	69.3
NP_709438.1\|3808391_3809435_+	hypothetical protein	NA	NA	NA	NA
NP_709439.1\|3809949_3810411_+	hypothetical protein	NA	NA	NA	NA
NP_709442.1\|3811259_3811559_-	hypothetical protein	NA	NA	NA	NA
NP_709445.1\|3813225_3813552_-	insertion sequence element IS629 protein	Q6H9S4	Enterobacteria_phage	1.6e-53	96.3
NP_709446.1\|3814221_3814494_-	hypothetical protein	NA	NA	NA	NA
NP_709447.1\|3814554_3815460_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	7.4e-178	99.3
3814713:3814727	attR	NA	NA	NA	NA
NP_709448.3\|3815417_3815828_-	IS2 repressor TnpA	Q76S41	Shigella_phage	4.1e-59	99.2
NP_709449.1\|3816149_3816344_+	hypothetical protein	NA	NA	NA	NA
NP_709451.1\|3818020_3818524_-	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	5.5e-82	91.3
NP_709452.1\|3818598_3819570_+	hypothetical protein	NA	NA	NA	NA
NP_709453.1\|3819519_3820713_-	membrane transport protein	NA	NA	NA	NA
NP_709454.2\|3820791_3822573_+	siderophore biosynthesis protein	NA	NA	NA	NA
NP_709455.1\|3822573_3823521_+	siderophore biosynthesis protein	NA	NA	NA	NA
NP_709456.1\|3823520_3825263_+	siderophore biosynthesis protein	NA	NA	NA	NA
NP_709457.1\|3825259_3826597_+	lysine:N6-hydroxylase	NA	NA	NA	NA
NP_709458.2\|3826602_3828798_+	ferric siderophore receptor	NA	NA	NA	NA
NP_709459.1\|3829718_3830477_+\|protease	serine protease-like protein	NA	NA	NA	NA
NP_709460.1\|3830447_3831353_-\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	7.4e-178	99.3
NP_709461.3\|3831310_3831721_-	IS2 repressor TnpA	Q76S41	Shigella_phage	4.1e-59	99.2
NP_709462.1\|3831821_3834344_+	long polar fimbriae	NA	NA	NA	NA
NP_709463.1\|3834501_3834897_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_709464.1\|3834923_3835199_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	1.9e-44	92.3
NP_709465.1\|3835509_3836205_+	fimbrial protein	NA	NA	NA	NA
NP_709466.1\|3836452_3837493_+	phosphate ABC transporter substrate-binding protein	A0A1D7SRJ6	Cyanophage	2.7e-51	38.3
NP_709467.3\|3837639_3838539_+	high-affinity phosphate ABC transporter permease	NA	NA	NA	NA
NP_709468.1\|3838538_3839429_+	phosphate ABC transporter permease subunit PtsA	NA	NA	NA	NA
NP_709469.1\|3839520_3840294_+	phosphate ABC transporter ATP-binding protein PstB	G9BWD6	Planktothrix_phage	1.3e-18	31.6
NP_709470.2\|3840308_3841034_+	transcriptional regulator PhoU	NA	NA	NA	NA
NP_709471.1\|3841320_3842142_+	transcriptional antiterminator BglG	NA	NA	NA	NA
NP_709472.2\|3842275_3844153_+	PTS system beta-glucoside-specific transporter subunits IIABC	NA	NA	NA	NA
NP_709473.1\|3845254_3845530_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_709474.1\|3845556_3845952_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_709475.2\|3846466_3848044_+	receptor protein	NA	NA	NA	NA
NP_709476.2\|3848070_3849246_+	xylanase	NA	NA	NA	NA
NP_709477.1\|3849247_3849970_+	6-phosphogluconolactonase	NA	NA	NA	NA
NP_709479.1\|3851558_3851906_-	insertion sequence element ISSfl4 ORF2	A0A0P0ZDM8	Stx2-converting_phage	4.1e-44	73.8
NP_709480.1\|3851902_3852577_-\|transposase	insertion sequence element ISSfl4 transposase	A0A0P0ZCV4	Stx2-converting_phage	2.0e-10	30.8
NP_709481.1\|3852744_3853218_-	hypothetical protein	NA	NA	NA	NA
NP_709482.1\|3853284_3853941_-	6-phosphogluconate phosphatase	NA	NA	NA	NA
NP_709483.2\|3854105_3855443_+	membrane / transport protein	A0A0R6PHV4	Moraxella_phage	2.6e-62	35.7
NP_709484.1\|3855496_3856063_-	hypothetical protein	NA	NA	NA	NA
NP_709485.2\|3856084_3856834_-	hypothetical protein	NA	NA	NA	NA
NP_709486.1\|3857368_3857671_+\|transposase	insertion sequence element IS600 transposase	NA	NA	NA	NA

DBSCAN-SWA_28

4357934 : 4399077

Shigella_phage(33.33%)

transposase,integrase

attL 4379472:4379527|attR 4410187:4410242

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_709896.1\|4357934_4359536_-\|transposase	insertion sequence element ISSfl4 transposase	A0A0P0ZEB3	Stx2-converting_phage	4.9e-148	61.5
NP_709898.1\|4359880_4360555_-\|transposase	insertion sequence element ISSfl4 transposase	A0A0P0ZCV4	Stx2-converting_phage	5.8e-10	30.1
NP_709899.3\|4360669_4361080_+	IS2 repressor TnpA	Q76S41	Shigella_phage	1.4e-59	100.0
NP_709900.1\|4361037_4361943_+\|transposase	IS2 transposase TnpB	Q9ZXG3	Shigella_phage	6.3e-177	98.7
NP_709901.4\|4362142_4362829_-	hypothetical protein	A0A2R2ZGT8	Clostridioides_phage	1.1e-37	45.6
NP_709902.2\|4362964_4363660_+	hypothetical protein	NA	NA	NA	NA
NP_709903.1\|4363656_4364118_+	hypothetical protein	NA	NA	NA	NA
NP_709904.1\|4364130_4365303_+	isoaspartyl dipeptidase	NA	NA	NA	NA
NP_709905.1\|4365367_4366279_+	cell density-dependent motility repressor	NA	NA	NA	NA
NP_709906.2\|4366271_4366673_-	DNA replication/recombination/repair protein	NA	NA	NA	NA
NP_709907.1\|4366949_4367345_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_709908.1\|4367371_4367647_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_709909.1\|4368113_4368944_+	hypothetical protein	NA	NA	NA	NA
NP_709910.1\|4369084_4369858_-	DNA-binding transcriptional repressor UxuR	NA	NA	NA	NA
NP_709911.1\|4370072_4371533_-	D-mannonate oxidoreductase	H8ZJP8	Ostreococcus_tauri_virus	2.1e-49	32.2
NP_709912.2\|4371613_4372798_-	mannonate dehydratase	NA	NA	NA	NA
NP_709913.1\|4373137_4374481_+	fructuronate transporter	NA	NA	NA	NA
NP_709914.1\|4374731_4375634_-	minor fimbrial subunit, D-mannose specific adhesin	NA	NA	NA	NA
NP_709915.2\|4375653_4376157_-	minor fimbrial subunit	NA	NA	NA	NA
NP_709916.2\|4376169_4376700_-	minor fimbrial subunit	NA	NA	NA	NA
NP_709917.1\|4378773_4379169_-	insertion element IS1 protein InsB	NA	NA	NA	NA
NP_709918.1\|4379195_4379471_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
4379472:4379527	attL	NA	NA	NA	NA
NP_709919.2\|4380188_4380914_-	periplasmic chaperone	NA	NA	NA	NA
NP_709920.2\|4380950_4381589_-	fimbrial protein	NA	NA	NA	NA
NP_709921.1\|4381554_4382103_-	major type 1 subunit fimbrin	NA	NA	NA	NA
NP_709922.1\|4382583_4383180_-	tyrosine recombinase	A0A2L1IV36	Escherichia_phage	3.9e-50	53.4
NP_709923.1\|4383774_4384260_-	recombinase	NA	NA	NA	NA
NP_709924.3\|4385704_4386430_+	hypothetical protein	NA	NA	NA	NA
NP_709925.2\|4386341_4387556_+	N-acetylneuraminic acid mutarotase	NA	NA	NA	NA
NP_709926.3\|4387620_4388601_+	hypothetical protein	Q08JA2	Stx2-converting_phage	7.9e-101	56.2
NP_709927.1\|4389069_4389465_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	1.8e-64	90.8
NP_709928.1\|4389491_4389767_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4
NP_709929.2\|4389861_4390557_+	DeoR family transcriptional regulator	NA	NA	NA	NA
NP_709930.1\|4391026_4391311_+	hypothetical protein	U5P4I9	Shigella_phage	4.6e-33	92.5
NP_709931.1\|4391367_4392180_+	hypothetical protein	U5P429	Shigella_phage	5.5e-148	93.0
NP_709932.1\|4392499_4392823_-	hypothetical protein	NA	NA	NA	NA
NP_709933.1\|4392897_4393401_+	insertion element IS1 protein InsB	U5P0U6	Shigella_phage	5.0e-83	91.9
NP_709934.1\|4393557_4393896_+\|transposase	insertion sequence element IS911 transposase InsN	Q716C1	Shigella_phage	9.5e-46	100.0
NP_709935.1\|4393922_4394762_+\|integrase	insertion sequence element IS911 integrase core domain-containing protein	Q716C2	Shigella_phage	1.3e-168	99.6
NP_709936.2\|4394736_4395948_-\|integrase	P4-type integrase	B7SYF8	Stenotrophomonas_phage	2.0e-77	42.3
NP_709937.2\|4396384_4397446_+	oxidoreductase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	3.5e-46	30.2
NP_709938.1\|4397526_4399077_+	hypothetical protein	A0A248XCZ8	Klebsiella_phage	1.2e-82	44.3
4410187:4410242	attR	NA	NA	NA	NA

DBSCAN-SWA_29

4511429 : 4519772

Escherichia_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_710044.3\|4511429_4513913_+	hypothetical protein	Q0GXV6	Lactococcus_phage	2.9e-67	33.1
NP_710045.1\|4514092_4514824_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
NP_710046.1\|4514924_4515200_+	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	2.5e-44	92.3
NP_710047.1\|4515226_4515622_+	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	2.8e-65	91.6
NP_710048.1\|4515887_4516526_+	hypothetical protein	NA	NA	NA	NA
NP_710049.2\|4516528_4517692_+	synthetase/amidase	B2ZXR7	Ralstonia_phage	1.4e-80	43.5
NP_710050.1\|4517757_4519140_+	carnitine operon oxidoreductase	A0A2L1IV26	Escherichia_phage	1.4e-05	96.2
NP_710051.1\|4519074_4519470_-	insertion element IS1 protein InsB	Q71TF0	Escherichia_phage	4.4e-66	91.6
NP_710052.1\|4519496_4519772_-	insertion element IS1 protein InsA	Q71TE9	Escherichia_phage	6.6e-45	93.4

Anti-CRISPR protein detection

Acr_ID: NC_004337.2|NP_707900.1|2085909_2086392_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NC_004337.2|YP_008439278.1|3024687_3024939_-|membrane-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_004337.2|NP_707900.1|2085909_2086392_+|hypothetical-protein

2085909_2086392_+

160 aa aa

2030313-2087783

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
NC_004337_4	Unclear	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	2050261-2050221
NC_004337_4	Unclear	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	2057289-2057249
NC_004337_4	Unclear	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	2072012-2072052
NC_004337_4	Unclear	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	2083128-2083088

1. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004337 position: 2050261-2050221, mismatch: 0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

2. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004337 position: 2057289-2057249, mismatch: 0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

3. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004337 position: 2072012-2072052, mismatch: 0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

4. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004337 position: 2083128-2083088, mismatch: 0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

NC_004337.2|YP_008439278.1|3024687_3024939_-|membrane-protein

3024687_3024939_-

83 aa aa

3015836-3080843

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_004337_4	Unclear	4.1\|2832943\|41\|NC_004337\|CRISPRCasFinder	2832943-2832983	41	3058230-3058270	0

1. spacer 4.1|2832943|41|NC_004337|CRISPRCasFinder matches to NC_004337 position: 3058230-3058270, mismatch: 0

tatctccccggcagccttcagggaaaaatatcatcagatgg	CRISPR spacer
tatctccccggcagccttcagggaaaaatatcatcagatgg	Protospacer
*****************************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_004851

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_004337

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information