Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NC_003103 | Rickettsia conorii str. Malish 7, complete sequence | 1 crisprs | PD-DExK,cas3,DEDDh | 0 | 0 | 0 | 0 |
1. NC_003103
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_003103_1 | 485936-486062 | Orphan |
NA
Consensus repeat of NC_003103_1
|
1 spacers
spacers of NC_003103_1
>1.1|485976|47|NC_003103|CRISPRCasFinder TTGAAAAAAAGGAATTGCAGAAAAAATTATATCAAGAATTATTACCT |
CRISPR arrays and Neighbor proteins around NC_003103_1
The CRISPR arrays of NC_003103_1 >merge|NC_003103|1|485936-486062|CRISPRCasFinder GAATTATTACCTGATTGCAAAATTCCTTTTGAAGAACTAATTGAAAAAAAGGAATTGCAGAAAAAATTATATCAAGAATTATTACCTGAATTATTACCTGATTGCAAAATTCCTTTTGAAGAACTAA >NC_003103|1|1|485936-486062|CRISPRCasFinder GAATTATTACCTGATTGCAAAATTCCTTTTGAAGAACTAA TTGAAAAAAAGGAATTGCAGAAAAAATTATATCAAGAATTATTACCT GAATTATTACCTGATTGCAAAATTCCTTTTGAAGAACTAA
>NC_003103.1|WP_010977131.1|484376_485297_+|site-specific-tyrosine-recombinase-XerD MGFIAQFLEMLLAERALSKNSILSYKRDLFDFQNYLAKHKLSELNITTENIRDWIEYLASNDLQARSINRKISTIKSYYEFLISENHTAFNPVLNVDLPKYQNKLPEILSIAQIKSLLEHCSQDNSPEGIRLNAMIHLLYASGLRVSELVSLKLADILTNKTSKGEVRKIFSVLGKGNKERVIVINEQAVISIAKYLTIRGVFVNKAKPRNLIYLFPSSALAGYMTRQNFAILLKSAALYAGLNPEYISPHILRHSFASHLLEGGADLRVIQELLGHADISTTQIYTHLQTNHLKKALLRHPLNKN >NC_003103.1|WP_010977130.1|483529_484084_+|phage-terminase-large-subunit MKLEQEIGSYNDNAQYLQEPIAQRSSLLNMEDIRFYENLSSRFDYCVQSWDTAIKSSEDSDYSVCNIWGIQKYYLVSLVRKKINYPELKNLTEKLAREYQPKFVLIEDKASGQQLIQDIGFLGGNIRVIGIKPSFDKVTRFASVVPLFQSASVLIPKQSSIILKELLNFPHIKNDDIVDSVSSS >NC_003103.1|WP_010977128.1|482740_483292_+|hypothetical-protein MLHSKELLNSILRQDFHSFIIKVFNTINPGAEYYPSKHIRIITDYLNAVQSGDINRLIINIPPRSLLQSICVSVAWPAYLLVVNPTKRIMVASYSQILSIKHSLDCQFILNSDWYTELFPSTILSKPHNQKSKFLTTANGFRFATLVGGSATGEGGDILIIDDPHNPTQIHSYKIRKKVYRLV >NC_003103.1|WP_010977127.1|482085_482559_-|DUF2155-domain-containing-protein MKLLKIIFIITICINFPIFAENLESVTTTEDIENDVFIPLDENHPILNPNDNINDSSEFKNYTNGKIIALNNITATSEEIDFKVGEEKYFGNIKIKLHKCIKNLDPYNEDNYLLMTITEYKIDEDPNVLFQGWMISSSISLSTFEHPIYEIFAKDCF >NC_003103.1|WP_010977126.1|480849_482085_-|O-antigen-ligase-family-protein MQYLISSLIFLIPSLGMLAGLSAAATVTIFLLISFLRGINRHCERLQGVWQSSNNVIPWLDHGIQKIQKDWIPLQAHGITMLFTAWCFISCLFAIHLINSLATFTQVFILLFLGFAVSNSAPFQNRLQLKKALIFGILTAILLFFIEYSSNGFLTRIFKTSFALYMLDRGCALLSITAWVAIIILLSNGKKRHTLMLYILVLYLLSISDSLASFLGFGIGGVIFILTRFMKPIFFKLIAISLITGSLLFPVIAKQIEPQDLSEKYLATQPSAAHRLFIWHFVANKIIEKPILGYGLASSKYIKAGDSEMIDYNGEKWHPLPLHPHNNILQITLELGIIGLILFLCLVYKYLKQISNLENKNFKAISYACFINYYIIGMISYNIWQIWWISSGIWVLVLMKLLVKPDIVIDN >NC_003103.1|WP_012737002.1|480320_480692_-|NADH-quinone-oxidoreductase-subunit-A MLQNSELLQEYLPIAIFFGIAVLVSGLIMILPNLLSTKKYNKDKLEPYECGFEPFSDARSKFDICFYLVAILFIIFDLEIAFLVPWAISLNTIGKIGFFSMMFFLFVLIIGFIYEWKKGALDW >NC_003103.1|WP_004995988.1|479791_480316_-|NADH-quinone-oxidoreductase-subunit-B MKNNFYQEDELLSNELSNRGFLLTKVDDVIGWARANSLWPMTFGLACCAVEMMQAAASRYDMDRFGMLFRPSPRQSDLMIVAGTLTNKMAPALRKVYDQMAEPKWVLSMGSCANGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQKKIKRTTGFKYDARQTH >NC_003103.1|WP_010977125.1|479085_479814_-|NADH-quinone-oxidoreductase-subunit-C MTLDKLIEKLAAKSSILITPITVKDYLAYKIEPNFLLPFLKALKESEELRFTLLTDLFGADFPQNNVVNSVGLGHKEQGAKPITNRRTTSDNVGESKSIDYKRFEVVYNLLSLKLNKRLIIKVYISEKETIPSAMNIFSAACWYEREVYDMYGVNFEGNDDKRRILTDYEFEGHPLRKDFPLTGYTQVKYDEKLKKVAYEPVDLDIEYREFDFSSHWHSPSYVLPGDEKATDVIPAKAGIQK >NC_003103.1|WP_010977124.1|477811_478987_-|NADH-dehydrogenase-(quinone)-subunit-D MTNNTKTITLNIGPQHPATHGVLRLILEMDGEVVNNADPHIGLLHRGTEKLIEHKTYLQAIPYFDRLDYVSPMCQEHAFALAVESLLECEVPRRAQFIRVLFSELTRILNHTLNIGSQALDIGATTPLLWLFEEREKIMEFYEHVSGSRMHSNYFRPGGVAADLPEGLLEDIDKFIEQFPPKLHDIESLLNENRLWKQRLVDIGVASQKEAMDWGFSGPMLRGSGIAWDLRKSNPYDVYDEMDFKVPIGKNGDCYDRYFVRMLEMYESIKIIKQCIEKMPKGAIKTDDPKLTPPTRAKMKESMEAMIHHFKLYTEGYDVPAGETYKAVEAPKGEFGVYLYSQGGNRPYRCRIKAPGFAHLQGLDFMSKGHLMADVITIIATLDIVFGEIDR >NC_003103.1|WP_010977123.1|476883_477387_-|NADH-quinone-oxidoreductase-subunit-NuoE MNTKITNFTFDKKNLNLAEEIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLAMPYIRAYEVATFYTMFNLKRVGKYHIQVCTTTPCWLRGSDDIMKICEKKLGVKLKETTEDQKFTLSEIECLGACVNAPVVQINDDYYEDLTQDKMGKIIDKLQND >NC_003103.1|WP_041471715.1|486526_487690_+|DUF5410-domain-containing-protein MATKNKKETVNTETKNLANLVIQEIGNKNFDFVVLQKMQQAFSIASKQKQREAFISLLDKKLNKEQLHKLNQAIMENANELMPDNDPNFVCRTPNNKVFQEILLLEAKRSGMKAKFNDKGELQSLDVKDITQEILDHYRILQENFYSKRDSKDLIDSRIAQSINFLLYAPLFRESDIYTKLGLKSAEIEREIQDPNGKYAKQLVDAKIGTNINFNTKENLENKAHEGKETKISLIIEKAITKLKKDKKVNIEDKRQGEIKRHLSKSLEGASDYILTLKKNDLVDVIYQGLDKGQTWWSKIVNYIGIKSYSISKENLEKIGTIINREMKNSHTPLKIELQEQLKQISKELNRFNNLALPLEAKKVQAKSKKPPVPPKPEHLKKRNHGL >NC_003103.1|WP_010977134.1|487887_488670_-|enoyl-ACP-reductase-FabI MTTGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSGVLEKRVKPLAKEIGCNFVSELDVTKPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHNGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASIKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIMGSTKL >NC_003103.1|WP_010977135.1|488745_490245_+|apolipoprotein-N-acyltransferase MYKPKIICLLLGILSGLVFAPTFFIPALLTLSYLCYIVQKSENWQEATKFGYLFGFGHFLSGIYWISIGVSVYIADFWWAIPFALFGLPIVLACFISASCTLSFFAKNNKYYQFIFCLCWVLFEWVRSWIFTGLPWNLIGYAFSFSDILIQPLSIIGIYGLSFIVIYISTSAYPLFSKQFTQLKILLASSVLVLTIIVIYGAVRLSNNHTNFTDIKVRLVQPSIPQTEKWNEEEFWHNLMLHINLSENLEPTDLIIWSEAALVVPDDIPQVKSKLLKMLNSTNAILITGGISDNKKQGDEFELYSAMYALDKNNHKLFEYHKSHLVPFGEYMPLKKILPFKKLTHGLIDYKEGNGGLVYLEKYNLKIKPLICYESIFPDFVRTNNEIADVIINITNDAWYGKSSGPYQHFHISRSRAVENGLPMIRVANNGISAIVDPFGRTIKKLNLNEINGTQGLIPKKLISPTIFSQFGNFTILLLIVFILLINYLLALILDHQRV >NC_003103.1|WP_010977136.1|490364_490850_+|hypothetical-protein MNYSIKHPDKLASERLKERRLAVGRYYPKRIRASFFDISALQVKKYEEGLSNIPISRLYVFAKVLNTPLKYFFNSSEEEKLKADNENTPNNKIEYLFKEIESDFLNNIAEAEGQYEHEVSFDYKELSRTMERALLSLTRAFTTNIRKIIIEHVRSVSIPCE >NC_003103.1|WP_004995964.1|490953_491757_+|N-acetylmuramoyl-L-alanine-amidase MSKSKAIENNGISNTNSPNGKYMAPRPEGVKPTCVVITYSVSKDIKAVREVLDERGASVHYIIDKDGTQKEYHNDLTDQAFYAGKSSWKGEVGVNKFGIGVMLINDAKSDFPAEQIGKLKEFLKDVTERYPNLDLKHDLVGLGEVTVNREGNAHIAPGSKFPWKELAEAGFGRYFETTQEQKSKLLLSLDSTGEKVNTLQENLKEYGYGVESTSTFDQFTQQAVRVFNDRYGTGLPNEEPPVSWTEAGQDVLSQLLGQTVLEQTENA >NC_003103.1|WP_010977137.1|492562_493480_+|ABC-transporter-substrate-binding-protein MFISNIFQKFFSFLFVLFITAAVYADQKKVAVIVPLEHAAMTEIISGIKESLKDIDAEIIVKNAHADSNILLAIIKQITDQDIDVIIPIGTTASQTVISHITNKPIVCAAAMINSKNLPLVTGVNDEIKITDTISKLHFLQNITLIYSSSEKVIPEVEMLKLYAGKNNISLHTVMIQNFNDMPVAVKNAPENTQSFIILKDHLIVSGINILKQEAFKRRIPIIASDEGSVISGATIAVGVQEKQIGIEAGLMAKKILQGIEPKDIPFGDMKDLTLFINLKSFVKQDILTKENLSVLPFARKELEE >NC_003103.1|WP_041471716.1|493484_494324_+|ABC-transporter-permease MNILVTALEQSLIMLPLILGMYISYRILKITDLTVDGTYVLGAVVFARSLSFGLFPALIFAVIAGGIIGSIVSVMQKNNRINGLIAGILASFMLYSVNLQIMQRPNISVLGMPTLLSILDLENWLIPLVIINCLIICSVIILLKGKLGLFLRAFGFNKDLLINLGKPAELYRTIGFSISNCLAALTGTLSAQVNGFADINMGFGVALVGIGAIVIGRHILIHANNFNAFKEILSCLIGILFYFIALGFLLRIGIDPINLKLILGIVLFISLSSVKREAL >NC_003103.1|WP_010977139.1|494320_495043_+|ABC-transporter-ATP-binding-protein MKPYLYAENIQFKVKERTEPIIAETTLNIAKEEFVVILGHNGSGKSTLAKILAGYLKPTSGKVFLDQVRIDKIPKGQKASTLVTLTQKAEERLFTELTLEENIILWESRFSSNERLASSELLELTGAPKRFLPLLSQPLGKFSGGEKQMILLALIIAHPPKILFLDEHTANLDPKASLEVMKKTAEIIEKHKITSVMITHNLEDAVNYGKRLIVLDSGKVVLDYLKPPGFSLKELKEILN >NC_003103.1|WP_010977140.1|495122_495539_-|hypothetical-protein MGAKSANNYKDMDVNDYNYDLPDEEGFAKNTHEKLLKDVMQRLKNGEDKDGIINTLIEISINEDTRTELIEKVLNYNVNDNKPVAAPALVTPVATVVPAPSTSTEEKLSAEVKTRLTIGKIRMILLISCFFIRLLTRM >NC_003103.1|WP_010977141.1|495770_495983_-|ankyrin-repeat-domain-containing-protein MDVNTKDGKGRIPIHYATYSKQHEITQILILLQPGSEIDTVDNYGGTPFFYLLLKHESGQNKTLLDFFLR |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation |
|---|
| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
|---|