CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_003485	Streptococcus pyogenes MGAS8232, complete sequence	2 crisprs	DinG,csm6,cas3,DEDDh,csa3	0	0	7	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_003485_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_003485_1

931383-931472

Orphan

Consensus_repeat	Method
ATCCAAAGATGCTGTTGAAGTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_003485_1

>merge|NC_003485|1|931383-931472|CRISPRCasFinder
ATCCAAAGATGCTGTTGAAGTTTATAGTGGTATTGCCGCAGAAACCGTTGAAGAAAAGTGGCAAGATACCAAAGATGCTGTTGAAGTTTA

>NC_003485|1|1|931383-931472|CRISPRCasFinder
ATCCAAAGATGCTGTTGAAGTTTA	TAGTGGTATTGCCGCAGAAACCGTTGAAGAAAAGTGGCAAGA
TACCAAAGATGCTGTTGAAGTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NC_003485.1\|WP_011017770.1\|934003_934852_+\|ribosome-biogenesis-GTPase-YlqF	unknown	unknown	gnl\|CDD\|236570
NC_003485.1\|WP_011017765.1\|929326_930076_+\|sortase	unknown	unknown	gnl\|CDD\|226287
NC_003485.1\|WP_011017772.1\|935697_936534_+\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NC_003485.1\|WP_002984645.1\|925646_926630_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NC_003485.1\|WP_011017761.1\|917578_918835_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NC_003485.1\|WP_011017773.1\|936640_938770_+\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|235516
NC_003485.1\|WP_011017768.1\|931669_932581_-\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NC_003485.1\|WP_002984653.1\|919819_920419_+\|lysozyme-family-protein	unknown	unknown	gnl\|CDD\|372680
NC_003485.1\|WP_011017771.1\|934841_935633_+\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|234574
NC_003485.1\|WP_072135501.1\|940404_941811_+\|pyruvate-carboxylase-subunit-B	unknown	unknown	gnl\|CDD\|79056
NC_003485.1\|WP_011017769.1\|933344_933785_-\|DUF1836-domain-containing-protein	unknown	unknown	gnl\|CDD\|378076
NC_003485.1\|WP_002989793.1\|918841_919819_+\|nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|377262
NC_003485.1\|WP_011017762.1\|920428_922147_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_003485.1\|WP_011017764.1\|926820_929307_+\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NC_003485.1\|WP_011017763.1\|922149_923877_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NC_003485.1\|WP_002984629.1\|932697_933348_-\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|224191
NC_003485.1\|WP_011017774.1\|938904_940251_+\|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO	unknown	unknown	gnl\|CDD\|235416
NC_003485.1\|WP_002984646.1\|924117_925488_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181958
NC_003485.1\|WP_011017766.1\|930158_930572_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319940
NC_003485.1\|WP_009881173.1\|941853_942168_+\|membrane-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_003485.1\|WP_011017770.1\|934003_934852_+\|ribosome-biogenesis-GTPase-YlqF	gnl\|CDD\|236570	PRK09563, rbgA, GTPase YlqF; Reviewed.	1.96973e-160
NC_003485.1\|WP_011017765.1\|929326_930076_+\|sortase	gnl\|CDD\|226287	COG3764, SrtA, Sortase (surface protein transpeptidase) [Cell envelope biogenesis, outer membrane].	6.52989e-73
NC_003485.1\|WP_011017772.1\|935697_936534_+\|DNA-protecting-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	2.98464e-106
NC_003485.1\|WP_002984645.1\|925646_926630_-\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	0
NC_003485.1\|WP_011017761.1\|917578_918835_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NC_003485.1\|WP_011017773.1\|936640_938770_+\|type-I-DNA-topoisomerase	gnl\|CDD\|235516	PRK05582, PRK05582, type I DNA topoisomerase.	0
NC_003485.1\|WP_011017768.1\|931669_932581_-\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	4.32949e-87
NC_003485.1\|WP_002984653.1\|919819_920419_+\|lysozyme-family-protein	gnl\|CDD\|372680	pfam13702, Lysozyme_like, Lysozyme-like.	3.90251e-79
NC_003485.1\|WP_011017771.1\|934841_935633_+\|ribonuclease-HII	gnl\|CDD\|234574	PRK00015, rnhB, ribonuclease HII; Validated.	8.78616e-108
NC_003485.1\|WP_072135501.1\|940404_941811_+\|pyruvate-carboxylase-subunit-B	gnl\|CDD\|79056	PRK12581, PRK12581, oxaloacetate decarboxylase; Provisional.	0
NC_003485.1\|WP_011017769.1\|933344_933785_-\|DUF1836-domain-containing-protein	gnl\|CDD\|378076	pfam08876, DUF1836, Domain of unknown function (DUF1836). This family of proteins are functionally uncharacterized.	2.69438e-38
NC_003485.1\|WP_002989793.1\|918841_919819_+\|nucleoid-associated-protein	gnl\|CDD\|377262	pfam04245, NA37, 37-kD nucleoid-associated bacterial protein.	1.27144e-26
NC_003485.1\|WP_011017762.1\|920428_922147_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.66806e-128
NC_003485.1\|WP_011017764.1\|926820_929307_+\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NC_003485.1\|WP_011017763.1\|922149_923877_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.1525e-155
NC_003485.1\|WP_002984629.1\|932697_933348_-\|hemolysin-III-family-protein	gnl\|CDD\|224191	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only].	1.15731e-65
NC_003485.1\|WP_011017774.1\|938904_940251_+\|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO	gnl\|CDD\|235416	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed.	0
NC_003485.1\|WP_002984646.1\|924117_925488_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	1.56989e-97
NC_003485.1\|WP_011017766.1\|930158_930572_+\|VOC-family-protein	gnl\|CDD\|319940	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein Bacillus subtilis YwkD and similar proteins. uncharacterized subfamily of vicinal oxygen chelate (VOC) family contains Bacillus subtilis YwkD and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.38958e-71

>NC_003485.1|WP_011017766.1|930158_930572_+|VOC-family-protein
MKLNAIHHVAIIVSDYNLSKNFYVNKLGFEIIRENYRPDKHDYKLDLSCGRIELEIFGKVTSDPYYQAPPKRVSQPEFKSEACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGEKMTFFFDPDGLPLELHE
>NC_003485.1|WP_011017765.1|929326_930076_+|sortase
MVKKQKRRKIKSMSWARKLLIAVLLILGLALLFNKPIRNTLIARNSNKYQVTKVSKKQIKKNKEAKSTFDFQAVEPVSTESVLQAQMAAQQLPVIGGIAISELGINLPIFKGLGNTELIYGAGTMKEEQVMGGENNYSLASHHIFGITGSSQMLFSPLERAQNGMSIYLTDKEKIYEYIIKDVFTVAPERVDVIDDTAGLKEVTLVTCTDIEATERIIVKGELKTEYDFDKAPADVLKAFNHSYNQVST
>NC_003485.1|WP_011017764.1|926820_929307_+|DNA-gyrase-subunit-A
MQDRNLIDVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRHMLVDGHGNFGSMDGDGAAAQRYTEARMSKIALELLRDINKNTVNFQDNYDGSEREPVVLPARFPNLLVNGATGIAVGMATNIPPHNLAESIDAVKMVMEHPDCTTRELMEVIPGPDFPTGALVMGRSGIHRAYDTGKGSIVLRSRTEIETTQTGRERIVVTEFPYGVNKTKVHEHIVRLAQEKRLEGITAVRDESSREGVRFVIEIRREASATVILNNLFKLTSLQTNFSFNMLAIENGVPKILSLRQIIDNYISYQKEVIIRRTRFDKDKAEARAHILEGLLIALDHLDEVIAIIRNSETDVIAQTELMSRFDLSERQSQAILDMRLRRLTGLERDKIQSEYDDLLALIADLSDILAKPERIITIIKEEMDEIKRKYANPRRTELMVGEVLSLEDEDLIEEEDVLITLSNKGYIKRLAQDEFRAQKRGGRGVQGTGVNNDDFVRELVSTSTHDTLLFFTNFGRVYRLKAYEIPEYGRTAKGLPIVNLLKLEDGETIQTIINARKEETAGKSFFFTTKQGIVKRTEVSEFNNIRQNGLRALKLKEGDQLINVLLTSGQDDIIIGTHSGYSVRFNEASIRNMGRSATGVRGVKLREDDRVVGASRIRDNQEVLVITENGFGKRTSATDYPTKGRGGKGIKTANITPKNGQLAGLVTVDGTEDIMVITNKGVIIRTNVANISQTGRATLGVKIMKLDADAKIVTFTLVQPEDSSIAEINTDRENSISKNKDN
>NC_003485.1|WP_002984645.1|925646_926630_-|L-lactate-dehydrogenase
MTATKQHKKVILVGDGAVGSSYAFALVTQNIAQELGIIDIFKEKTQGDAEDLSHALAFTSPKKIYAADYSDCHDADLVVLTAGAPQKPGETRLDLVEKNLRINKEVVTQIVASGFKGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALAAKIGVDARSVHAYIMGEHGDSEFAVWSHANVAGVGLYDWLQANRDIDEQGLVDLFISVRDAAYSIINKKGATFYGIAVALARITKAILDDENAVLPLSVFQEGQYEGVEDCYIGQPAIVGAYGIVRPVNIPLNDAELQKMQASANQLKAIIDEAFAKEEFASAAKN
>NC_003485.1|WP_002984646.1|924117_925488_+|FAD-dependent-oxidoreductase
MSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGCGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIITDKNEYDVDMVILAVGFRPNTTLGNGKIELFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKIVYDKDSRRILGAQMAAREDMSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNKPYNYITMAALGAKD
>NC_003485.1|WP_011017763.1|922149_923877_+|ABC-transporter-ATP-binding-protein
MIKTDHHLLKRVLQDLLKKPLPVCILVIASFVQVGLSVYLPVLIGKAVDMSLSVNSWQTLKWLLRQMLVVIVVNTLIQWVMPLVYSRLLYQYSQQLKDKLLEKIHRLPFAYLDRQTIGDLVSRVITDTEQLINGLQMVFNQFILGLLTILCTIIAMAQIDWLMLILVLVLTPSSLFLARFIAQKSFHYAQAQTKSRGNLAQFTEEILRQEGLVQLFNAQEQSICDYHVLNKTYCQASQKAIFYASTVNPATRFINSVIYALLAGLGAVRIMAGLFSVGQLTTFLNVVVQYTKPFNDISSVLAEIQSSLACAQRLYDLLDIEIKEQEHFLTFKASAVKGQIDFEEVSFSYQKDRPLLKDINFSVPAGSKVAIVGPTGAGKSTLINLLMRFYELDADSIKLDKVPIKCYAKEELRSITGMVLQETWLKDATVHELIAYGSEEASRDEVVAAAKAAHAHFFIMQLPKTYDTYLSASDDALSQGQLQLLAIARMFLKKPEVLILDEATSSIDIRTEAVIQEALKELMRGRTSFIIAHRLSTIQSADLILVMDQGRLVEWGTHASLMSKNGCYARLQKIE
>NC_003485.1|WP_011017762.1|920428_922147_+|ABC-transporter-ATP-binding-protein
MKRLRPYVKGYLKESILGPLFKLLEALFELLVPLLVANMIDLSISQHNSQGILRVVLTLFGLATIGLLLSVTAQYFSSKAAVGFTRQMTDDLFKKIMFLSKEDQDHLGYASLLSRLTSDSFQIQTGINQFLRLFLRAPIIVCGAMVMAYWISPSLTLWFVMMVIVLLTLVFVMSHLLGPLYLLIRRETDHLVRLTSQQLQGIRVIKAFNQTQKELQAFKQQNMLLSRHQYQAATLANVLNPMTFLVVNLTLLILIWQGSWQVAHRSLSQGMLVALINYLLQILAELLKMTMLMGTINQSVTAAKRINQVFVLADEAPLPLLKDGPISTHLLTIRHLTFTYPGAAEPSLYDIQLSADQGEWIGIIGGTGAGKTTLIDLICQTYSQYSGEVSLNWQGEVPKTLTEWRNVIALVPQKAQLFKGTIRSNLLLGQSMPISDEELWRALELAQAKEFVAALPEQLEAPVEAFGRHFSGGQRQRLAIARALLKPKPILILDDASSALDNETRGRLFKALKEELSDVLVILVTQSIKNLQFADKILVLEQGHQLDFASHDQLKVSNALYQEMLALYVKGE
>NC_003485.1|WP_002984653.1|919819_920419_+|lysozyme-family-protein
MFRLLKRACSFLLLFVIYQSFVIHHNVQRVLAYKPMVEKTLAENDTKANVDLVLAMIYTETKGGEADVMQSSESSSGQKNSITDSQASIEHGVNLLSHNLALAEEAGVDSWTAVQAYNFGTAYIDYIAKHGGQNTVDLATTYSKTVVAPSLGNTSGQTYFYYHPLALISGGKLYKNGGNIYYSREVHFNLYLIELMSLF
>NC_003485.1|WP_002989793.1|918841_919819_+|nucleoid-associated-protein
MLDSYIKRIVIHQFSPNDTELLLSDRLVSITPRIDEYFRKKLAKVFSDEAKRGQFEANNTFFTTIGDDLLETSVTIAQLWKEAFVISEDQKTNDLVFVQFDKDGEPFFAFLRIALKEQFAHLSDNYEHPFTVTQNNLPSPTQTPDEALVINLKSGQYYLIEKRVKHNGSFANYFSEHLLKVTPEQSVKKSIKMIEQTAQKIAEHFNQDDFTFQSKMKSTLFKQLEADDVLSPEKLADQLFDDNLTARLTFVDQVKDVIPEPIKISDIDHSRQIKKLENQKLSLSNGIELTVPNAIYQDAEAVEFLLNDDGTYSILIKNIEDIKTK
>NC_003485.1|WP_011017761.1|917578_918835_+|serine-hydroxymethyltransferase
MIFDKGNVEDFDKELWDAIHAEEERQEHHIELIASENMVSKAVMAAQGSVLTNKYAEGYPGNRYYGGTECVDIVETLAIERAKKLFGAAFANVQAHSGSQANAAAYMALIEAGDTVLGMDLAAGGHLTHGSPVNFSGKTYHFVGYSVDADTEMLNYEAILEQAKAVQPKLIVAGASAYSRSIDFEKFRAIADHVGAYLMVDMAHIAGLVAAGVHPSPVPYAHIVTSTTHKTLRGPRGGLILTNDEALAKKINSAVFPGLQGGPLEHVIAAKAVAFKEALDPAFKDYAQAIIDNTAAMAAVFAQDDRFRLISGGTDNHVFLVDVTKVIANGKLAQNLLDEVNITLNKNAIPFETLSPFKTSGIRIGCAAITSRGMGVKESQTIARLIIKALVNHNQETILEEVRQEVRQLTDAFPLYKK
>NC_003485.1|WP_011017768.1|931669_932581_-|diacylglycerol-kinase-family-lipid-kinase
MKTVRIFYNPNSGKKEDQLAGQVKDYFCQHGFSEDSVEIITPKDADQAFQLAKQAAKDKIDLVIPLGGDGTLNKIIGGIYEGGAHCLIGLVPSGTVNNFAKAMHIPLQITEALDTILTGQIKQVDICKANQQYMISSLTLGLLADIAADVTAEEKRRFGPLAFLKDSIRILKRNRSYAISLISHNHRIHLKTKFLLITMTNTIAGFPSFSPGAQADDGYFQVYTMKKVSFFKFLWHINDFRQGDFSKAEEISHFQANTLSLLPQAKKQAILPRARIDGDKSDYLPIQLDIIPKAISIIVPTED
>NC_003485.1|WP_002984629.1|932697_933348_-|hemolysin-III-family-protein
MNQTFKQSLPLSFSEEVANSVTHAIGAFAMLILLPISASYAYQTYDLKAAIGISIFVISLFLMFLSSTIYHSMAYGSVHKYILRIIDHSMIYIAIAGSYTPVALSLVSGWLGYIIIVLQWGITLFGILYKIFAKRINEKFSLMLYIVMGWLVVFILPVIIQKTSLAFGLLMLFGGLSYTIGAVFYAKKRPYFHMIWHLFILLASALQFIAITFFML
>NC_003485.1|WP_011017769.1|933344_933785_-|DUF1836-domain-containing-protein
MIFPSLPYWKDLPDLDLYLDQVLLYVNQCTDFSEVSDNKSLTASMINNYVKHGYVTKPIKKKYQKQQLARLIAISLFKTVFPIQDISRVLEELQAQADSESLYNTFVTCWNQKAPIEEDIPPIVQVACQTVKDYHKTIYLSQEVTQ
>NC_003485.1|WP_011017770.1|934003_934852_+|ribosome-biogenesis-GTPase-YlqF
MAMIQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADLADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFEDELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIMTLTRQLGFKDDYDRFYSLFVKEVRDGKLGQYTLDQVGDMDAD
>NC_003485.1|WP_011017771.1|934841_935633_+|ribonuclease-HII
MPTSIKAIKESLEAVTSLLDPLFQELATDARLGVQKALKSRQKAIQTDLAEEERLEAMLSYEKALYKKGYQAIAGIDEVGRGPLAGPVVAACVILPKYCKIKGLNDSKKIPKAKHETIYQAVKEKALAIGIGIIDNQLIDEVNIYEATKLAMLEAIKQLEGQLTQPDYLLIDAMTLDIAISQQSIIKGDANSLSIAAASIVAKVTRDQMMANYDRIFPGYGFAKNAGYGTKEHLQGLKAYGITPIHRKSFEPVKSMCCDSTNP
>NC_003485.1|WP_011017772.1|935697_936534_+|DNA-protecting-protein-DprA
MNHFELYKLKKAGLTNKNILNILDYQEHQEKSLSLRDMAVVSGCKHPSHFIEAYKQLDIQKLKMEFKQFPSISILDKHYPMALKEIYNPPVLLFFQGNLDLLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHLACLKNGGQTIAIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPREEALSYHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGRDIFAVPGNILDGKSEGCLQLIKEGATCVTSGMDILSEY
>NC_003485.1|WP_011017773.1|936640_938770_+|type-I-DNA-topoisomerase
MGTKTTTKPKTGTKKSTTKKKSTAKKNLVIVESPAKAKTIEKYLGRSYKVVASVGHIRDLKKSSMSIDFDNNYEPQYINIRGKGPLINSLKKEAKAAKKVYLASDPDREGEAISWHLSHILGLDPQDNNRVVFNEITKDAVKHAFVEPRQIDMDLVDSQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQSVALKLIIDRENDIKAFVPKEYWSIDGLFKKGTKKFQATFYGINGKKTKLDNNNDVKEVLAKLTNEDFLVSKVDKKERRRNAPLPYTTSSLQQDAANKINFRTRKTMMVAQQLYEGIHLGENGTQGLITYMRTDSTRISPVAQNDAAQFIINRFGANYSKHGNRVKNTSGAQDAHEAIRPSSVNHTPDSIAKYLNKDQLKLYTLIWNRFVASQMTAAVFDTVKVNLEQNGVIFVANGSQMKFDGYMAVYNDSDKNKMLPEMAEGETVKKISTSPEQHFTQPPARYSEATLIKTLEENGVGRPSTYAPTLEVIQRRYYVKLSAKRFEPTELGEIVNKLIVEFFPDIVDVAFTAEMEGKLDQVEIGEEQWQHVIDQFYQPFVKELNKAESEIEKIQIKDEPAGFDCDVCGHPMVIKLGRFGKFYACSNFPECRNTKAITKEIGVTCPVCHKGQVIERKTKKNRIFYGCDQYPDCEFISWDLPIGRACPKSGDYLIEKKVRGGKQVMCSNETCDYKEEKIK
>NC_003485.1|WP_011017774.1|938904_940251_+|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO
MSQSTATYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKATPQHKTTNFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRNGEANRVPAGGAMAVDREGYAKSVTAELENHPLIEVIRDEITEIPNDAITVIATGPLTSDALSEKIHAVNGGDGFYFYDAAAPIIDKSTIDMSKVYLKSRYDKGEAAYLNCPMTKEEFMAFHEALTTAEEAPLNAFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFQSRSNPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKREEALIFPQTTAIGSLPHYVTHADSKHFQPMNVNFGIIKELEGPRIRDKKERYEAIASRALADLDTCLALL
>NC_003485.1|WP_072135501.1|940404_941811_+|pyruvate-carboxylase-subunit-B
MIQFGGFSMQQQVAITETVLRDGHQSLMATRLSIEDMLPVLTILDKIGYYSLECWGGATFDACIRFLNEDPWERLRTLKKGLPNTRLQMLLRGQNLLGYRHYADDIVDKFISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKEAQLCIAYTTSPVHTLNYYLSLVKELVEMGADSICIKDMAGILTPKAAKELVSGIKAMTKLPLIVHTHATSGISQMTYLAAVEAGADRIDTALSPFSEGTSQPATESMYLALKEAGYDITLDETLLEQAANHLRQARQKYLADGILDPSLLFPDPRILQYQVPGGMLSNMLSQLKQANAESKLEEVLAEVPRVRKDLGYPPLVTPLSQMVGTQAAMNVILGKPYQMVSKEIKQYLAGDYGKTPAPVNEDLKRSQIGSAPVTTNRPADQLSPEFEVLKAEVADLAQTDEDVLTYALFPSVAKPFLTTKYQTDDVIKVTAFIKA
>NC_003485.1|WP_009881173.1|941853_942168_+|membrane-protein
MTYSFIDILQVTLVSLFLVLTCLTGIMGLMMLSGKLLSQEKKTLSQQASSIPQEQEADKLSGEALETLLAKDELARIAVMTSLAYASQEESGKRFEVIAVERKS

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Crispr_ID: NC_003485_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_003485_2

1031263-1031364

Orphan

Consensus_repeat	Method
AATAATTGGTATAGTCTAATTATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_003485_2

>merge|NC_003485|2|1031263-1031364|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATACCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACATAAAATTGGTATAGTCTAATTATA

>NC_003485|2|2|1031263-1031364|CRISPRCasFinder
AATAATTGGTATAGTCTAATTATA	CCGATAAAAACATTATGTTTACAGTATATAATATCCACAATGTCTTGTCAAACA
TAAAATTGGTATAGTCTAATTATA

Protein	Signature genes	Signature genes Name	Protein_function
NC_003485.1\|WP_011017834.1\|1034820_1037931_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|180917
NC_003485.1\|WP_011017833.1\|1029397_1031212_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NC_003485.1\|WP_011017829.1\|1023880_1025116_+\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|223131
NC_003485.1\|WP_011017836.1\|1041279_1041501_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|269889
NC_003485.1\|WP_011017828.1\|1022438_1023761_+\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
NC_003485.1\|WP_002989607.1\|1040106_1040721_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NC_003485.1\|WP_002989617.1\|1038115_1038487_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NC_003485.1\|WP_002984455.1\|1028118_1028760_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NC_003485.1\|WP_011017831.1\|1026627_1027464_-\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270217
NC_003485.1\|WP_002984437.1\|1038486_1039185_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NC_003485.1\|WP_011017835.1\|1039194_1039980_+\|hypothetical-protein	unknown	unknown	unknown
NC_003485.1\|WP_011017832.1\|1028866_1029202_-\|alkylphosphonate-utilization-protein	unknown	unknown	gnl\|CDD\|225380
NC_003485.1\|WP_002984447.1\|1032162_1033665_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NC_003485.1\|WP_011017830.1\|1025485_1026259_-\|CAMP-factor-pore-forming-toxin-Cfa	unknown	unknown	gnl\|CDD\|369335
NC_003485.1\|WP_011017827.1\|1019589_1021908_-\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NC_003485.1\|WP_011017837.1\|1041615_1042404_-\|streptococcal-pyrogenic-exotoxin-SpeL	unknown	unknown	gnl\|CDD\|280949
NC_003485.1\|WP_002984457.1\|1027479_1028109_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NC_003485.1\|WP_002984449.1\|1031387_1031945_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NC_003485.1\|WP_002984469.1\|1018978_1019227_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NC_003485.1\|WP_002984444.1\|1033727_1034741_-\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111

Protein	Function_ID	Function_description	E-value
NC_003485.1\|WP_011017834.1\|1034820_1037931_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|180917	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed.	0
NC_003485.1\|WP_011017833.1\|1029397_1031212_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NC_003485.1\|WP_011017829.1\|1023880_1025116_+\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	4.75704e-95
NC_003485.1\|WP_011017836.1\|1041279_1041501_-\|hypothetical-protein	gnl\|CDD\|269889	cd06603, GH31_GANC_GANAB_alpha, neutral alpha-glucosidase C, neutral alpha-glucosidase AB. This subgroup includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.	0.00833375
NC_003485.1\|WP_011017828.1\|1022438_1023761_+\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
NC_003485.1\|WP_002989607.1\|1040106_1040721_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.14841e-31
NC_003485.1\|WP_002989617.1\|1038115_1038487_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.0536e-49
NC_003485.1\|WP_002984455.1\|1028118_1028760_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.36474e-71
NC_003485.1\|WP_011017831.1\|1026627_1027464_-\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270217	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily. This subfamily includes periplasmic binding domain of ATP-binding cassette transporter-like systems that serve as initial receptors in the ABC transport of amino acids and their derivatives in eubacteria. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The Abp proteins belong to the PBPI superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.53862e-108
NC_003485.1\|WP_002984437.1\|1038486_1039185_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.28377e-64
NC_003485.1\|WP_011017832.1\|1028866_1029202_-\|alkylphosphonate-utilization-protein	gnl\|CDD\|225380	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism].	8.73894e-65
NC_003485.1\|WP_002984447.1\|1032162_1033665_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NC_003485.1\|WP_011017830.1\|1025485_1026259_-\|CAMP-factor-pore-forming-toxin-Cfa	gnl\|CDD\|369335	pfam07373, CAMP_factor, CAMP factor (Cfa). This family consists of several bacterial CAMP factor (Cfa) proteins which seem to be specific to Streptococcus species. The CAMP reaction is a synergistic lysis of erythrocytes by the interaction of an extracellular protein (CAMP factor) produced by some streptococcal species with the Staphylococcus aureus sphingomyelinase C (beta-toxin).	9.3669e-96
NC_003485.1\|WP_011017827.1\|1019589_1021908_-\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_003485.1\|WP_011017837.1\|1041615_1042404_-\|streptococcal-pyrogenic-exotoxin-SpeL	gnl\|CDD\|280949	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain.	4.07809e-08
NC_003485.1\|WP_002984457.1\|1027479_1028109_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.89978e-111
NC_003485.1\|WP_002984449.1\|1031387_1031945_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.3728e-38
NC_003485.1\|WP_002984469.1\|1018978_1019227_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.43969e-13
NC_003485.1\|WP_002984444.1\|1033727_1034741_-\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0

>NC_003485.1|WP_011017833.1|1029397_1031212_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGVVGNRNATDILMQGLEKLEYRGYDSAGIFVANANQTNLIKSVGRIADLRAKIGIDVAGSTGIGHTRWATHGQSTEDNAHPHTSQTGRFVLVHNGVIENYLHIKTEFLAGHDFKGQTDTEIAVHLIGKFVEEDKLSVLEAFKKALSIIEGSYAFALMDSQATDTIYVAKNKSPLLIGLGEGYNMVCSDAMAMIRETSEFMEIHDKELVILTKDKVTVTDYDGKELIRDSYTAELDLSDIGKGTYPFYMLKEIDEQPTVMRQLISTYADETGNVQVDPAIITSIQEADRLYILAAGTSYHAGFATKNMLEQLTDTPVELGVASEWGYHMPLLSKKPMFILLSQSGETADSRQVLVKANAMGIPSLTVTNVPGSTLSRESTYTMLIHAGPEIAVASTKAYTAQIAALAFLAKAVGEANGKQEALDFNLVHELSLVAQSIEATLSEKDLVAEKVQALLATTRNAFYIGRGNDYYVAMEAALKLKEISYIQCEGFAAGELKHGTISLIEEDTPVIALISSSQLVASHTRGNIQEVAARGAHVLTVVEEGLDREGDDIIVNKVHPFLAPIAMVIPTQLIAYYASLQRGLDVDKPRNLAKAVTVE
>NC_003485.1|WP_011017832.1|1028866_1029202_-|alkylphosphonate-utilization-protein
MSLPNCLQCQSEYVYEDGLLLICPMCAFEWTPGEEATEEEGLVVLDSNGVRLSDGDTITVIKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI
>NC_003485.1|WP_002984455.1|1028118_1028760_-|amino-acid-ABC-transporter-permease
MTYIQQVLPSLLDGALVTLQVFFIVIILSIPLGAILAFLMKVPFKPLQWFLTLYVWMMRGTPLLLQLIFFYYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKTAANRDATLAPMFIAGLIYLLLIGLVTIISKQVEKRFNYYQ
>NC_003485.1|WP_002984457.1|1027479_1028109_-|amino-acid-ABC-transporter-ATP-binding-protein
MLELKNISKQFGQKTIFDGFNLTVQDGEVLSLVGPSGGGKTTLLRMLAGLESIDSGQVFYNGEDVGIDHLENRNLLGFVFQDFQLFPHLTVLDNLTLSPTITMGKQKADAKEKALDLLARLGLKEHAQVYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQTVEALIVQNREMGITQIVVTHDLVFAEAISDRIIRVNPK
>NC_003485.1|WP_011017831.1|1026627_1027464_-|amino-acid-ABC-transporter-substrate-binding-protein
MIIKKRTVAILAIASSFFLVACQATKSLKSGDAWGVYQKQKSITVGFDNTFVPMGYKDESGKCKGFDIDLAKEVFHQYGLKVNFQAINWDMKEAELNNGKIDVIWNGYSITKERQNKVAFTDSYMRNEQIIVVTKRSDIKTISDMKHKVLGAQSASSGYDSLLRTPKLLKDFIKNKDANQYETFTQAFIDLKSDRIDGILIDKVYANYYLAKEGQLENYRMIPTTFENEAFSVGLRKEDKTLQAKINRAFRVLYQNGKFQAISEKWFGDDVVTANIKS
>NC_003485.1|WP_011017830.1|1025485_1026259_-|CAMP-factor-pore-forming-toxin-Cfa
MKPKHLLCLSTVVAGLALFSTMTHSVLADDASNPDTILMNNNQANLQRDALVQKLDEGHQQLEAIKHEAKGTDIEATVNKAIDAVDHMKSSIRFNTETIYDFSSIGARVEALSDAIKAIVFSTTQLTHKVEKAHTDTGFAITKLVIRIIDPFASVDAIKAQVQEIKALEEKVINYPDLQPTDRATIYTKAKLNKAIWNTRLERDKKVLGIKSFDVYNRLNKAITHAVGVQLNPTTTVQQVDDEVIAVQNALETALKS
>NC_003485.1|WP_011017829.1|1023880_1025116_+|cation-diffusion-facilitator-family-transporter
MTQDPIANLKLARKGPIVSIIVYLLLSAAKLLAGYLLNASSLIADGFNNLSDIVGNVALLIGLHLASQPADANHKFGHWKIEDLSSLVTSFIMFLVGFQVLIHTIKSIFSGQQVDIDPLGAIVGIVSAFVMLGVYVFNKRLSKRVKSSALVAASKDNLADAVTSIGTSIAIIAASLHLPVIDHIAAMIITFFILKTAFDIFMESSFSLSDGFDSRHLKKYEKAILEIPKIVAVKSQRARTYGSNVYLDIVLEMNPDLSVYESHSITEKVEQLLSDQFSIYDIDIHVEPAMILEEEIFDNVAKKLYRYEKLILSKVPDYDHYIAKSFQLVDANGQTVNYEQFLNQEIYYPSNFNHFQIESISQKTMLVTYQLNGNQHTSIWRRHESWSLLFHQITPIAKRQLHHTHYRIVKM
>NC_003485.1|WP_011017828.1|1022438_1023761_+|sodium:alanine-symporter-family-protein
MIALVKLIDNLVWGPPLLILLVGTGVYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDASGHISGGPMYYIVNGMGTKWKPLAILFASSGILVALFGIGTFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLTVIFSHYQQLLPVIRLVFQSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>NC_003485.1|WP_011017827.1|1019589_1021908_-|DNA-helicase-PcrA
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDLLDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDANPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRNRRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANPADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKGKAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLESQARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDSQAEASEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERRLAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLARPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTIPSASTSSVLPLGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKK
>NC_003485.1|WP_002984469.1|1018978_1019227_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGLIWTLIVGALIGVIAGALTKKGGSMGWIANIAAGLVGSSVGQALLGSWGPSLAGMSLIPSVIGAVIVVMITSFVLNKTNN
>NC_003485.1|WP_002984449.1|1031387_1031945_-|signal-peptidase-I
MVKRDFIRNILLLLIVIIGAILLRIFVFSTFKVSPETANTYLKSGDLVTIKKNIQPKYKDFVVYRVGKKDYVSRVIAVEGDSVTYMDDIFYLNNMVESQAYLEKMKAHYLNHAPFGTLYTDDFTVATITADKYQKVPKGKYLLLNDNRKNTNDSRRFGLINASQIKGLVTFRVLPLSDFGFVEVE
>NC_003485.1|WP_002984447.1|1032162_1033665_-|pyruvate-kinase
MNKRVKIVATLGPAVEIRGGKKYGEDGYWAGQLDVEESAKKIAELIEAGANVFRFNFSHGDHKEQGDRMATVRLAEEIARQKVGFLLDTKGPEMRTELFADDAKEFSYVTGEKIRVATTQGIQSTRDVIALNVAGSLDIYDEVEVGHTILIDDGKLGLKVIDKDIATRQFIVEVENDGIIAKQKGVNIPNTKIPFPALAERDNADIRFGLEQGLNFIAISFVRTAKDVEEVREICRETGNDHVQLFAKIENQQGIDNLDEIIEAADGIMIARGDMGIEVPFEMVPVFQKMIITKVNAAGKAVITATNMLETMTEKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATIDRNAQTLLNEYGRLDSSAFPRTNKTDVIASAVKDATHSMDIKLVVTITETGNTARAISKFRPDADILAVTFDEKVQRALMINWGVIPVLAEKPASTDDMFEVAERVAVEAGLVQSGDNIVIVAGVPVGTGGTNTMRVRTVK
>NC_003485.1|WP_002984444.1|1033727_1034741_-|6-phosphofructokinase
MKRIAVLTSGGDAPGMNAAIRAVVRKAISEGMEVYGINRGYAGMVDGDIFPLGSKEVGDKISRGGTFLYSARYPEFAQLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAVGIPGTIDNDIAGTDYTIGFDTAVNTAVEAIDKLRDTSSSHGRTFVVEVMGRNAGDIALWAGIASGADQIIVPEEEFDIEKVASTIQYDFEHKGKNHHIIVLAEGVMSGEAFAQKLKEAGDKSDLRVTNLGHILRGGSPTARDRVIASWMGSHAVELLKEGKGGLAVGIHNEELVESPILGTAEEGALFSLTEEGKIIVNNPHKARLDFAALNRSLSQ
>NC_003485.1|WP_011017834.1|1034820_1037931_-|DNA-polymerase-III-subunit-alpha
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFIKGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSGKLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKRQLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLTTFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEAGLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMGMGRGSAAGSLVAYALDITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDIYRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNLTKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIHAAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLTFVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAINLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIAPILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKMEEDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKIYMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKIGLFDYFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSATEKYSLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRIIRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRIKERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVIHYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>NC_003485.1|WP_002989617.1|1038115_1038487_+|GntR-family-transcriptional-regulator
MSWKFDEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNTMQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNMTKMGFSHTEIIPVLTSFLKEDSQ
>NC_003485.1|WP_002984437.1|1038486_1039185_+|ABC-transporter-ATP-binding-protein
MAHLLQLHHVSKSYREKKAIDDLTITIPNGKIIGLLGPNGSGKTTLIKLINGLLQPNKGEIVIDGYRPCVETKKIISYLPDTTYLNENMRIKDMLEFFSDFYSDFDKSKATSLLRDLELDPEDRFKTLSKGNKEKVQLILVMSRKARLYVLDEPIGGVDPAARDYILKTIINSYCENASVIISTHLISDIEPILDEVIFLKQGRLFLSGNADDLRQEYQQSIDSLFRETYKV
>NC_003485.1|WP_011017835.1|1039194_1039980_+|hypothetical-protein
MFGKLLKYEFRSIGKWYFALNAFVIAIAAILSFTIKLFAQSNSDGLFGVLTNKMLPLTLGLTFGSLIAGSLLSTLLIIIKRFSKSVFGREGYLTLTLPVNSHQIILSKLLASFICSVFNTIILAFAIAIVIVPMFNVNELLEGFFNSFKMDYFINMLTVLAYVLLSTFTSILLIYLSISIGQLFSNRRGLMAFIAYFILVILISVAATYVHNHIFNINTSADSFPFTEQKTTYLLILEQFIEMIMFYLATNFIIKNKLNLQ
>NC_003485.1|WP_002989607.1|1040106_1040721_-|TVP38/TMEM64-family-protein
MTKRNSKAYILWQKIIKILGIIALIGTFFLAFWLYRLGILNDSNALKDLVQRYRLWGPFVFIVVQIIQIVFPVIPGGLTTVAGFLIFGPVTGFIYNYVGIIIGSIVLFLLVKTYGRKFILLFVNDKTFYKYERRLETPGYEKLFIFCMASPVSPADIMVMITGLTDMSLKRFVTILLITKPISIIGYSYLFIFGKDVISWFLQH
>NC_003485.1|WP_011017836.1|1041279_1041501_-|hypothetical-protein
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIIMKKTLSRQKNN
>NC_003485.1|WP_011017837.1|1041615_1042404_-|streptococcal-pyrogenic-exotoxin-SpeL
MRIFLHQNCRLVNMSTTFFIVVLSLMVFSVRMVSAEETINIKDIYSPRWDVDKTLSPTTLREIYNRDTIKKVNKPITGKRGTQVIMDAQHKTKVWEFDDYNFIISSNLHPSVEGKFNVGDNVDVFGLALSAEVFSKDQIHSINGGLVKVNERKGAGKTIYMNVFIDGHKKDDTSKYKITFEKSPVTFQEVDVRLRKSFMLNDEIKLYQYDSKVLSGNWEFHGSGEKEEGADLFKYPDYRYNNLIDIDKKSHIDVYLFTNKEN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36828 : 49143

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041174219.1\|36828_40554_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	7.8e-40	27.0
WP_004218736.1\|40714_42169_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	33.3
WP_011017231.1\|42196_43219_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FGG1	Synechococcus_phage	5.2e-63	41.4
WP_002986700.1\|43386_43941_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-25	36.1
WP_011017232.1\|44124_45672_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	9.8e-45	51.8
WP_011017233.1\|45730_46855_-	SH3 domain-containing protein	F8HGP2	Streptococcus_phage	5.0e-06	28.0
WP_011017234.1\|47107_48373_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_023079557.1\|48651_49143_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.2e-18	42.3

DBSCAN-SWA_2

282193 : 463360

201

Streptococcus_phage(52.13%)

terminase,bacteriocin,integrase,transposase,portal,holin,tRNA,tail,protease,capsid

attL 298070:298087|attR 461275:461289

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002985953.1\|282193_283090_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_011017345.1\|283323_283857_+	DUF177 domain-containing protein	NA	NA	NA	NA
WP_011017346.1\|284123_284810_+	two-component system response regulator CovR	W8CYM9	Bacillus_phage	1.1e-29	31.8
WP_002985946.1\|284815_286318_+	two-component system sensor histidine kinase CovS	W8CYF6	Bacillus_phage	2.4e-24	30.3
WP_002985941.1\|286532_287027_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_011017347.1\|287010_288186_+	DnaD domain protein	NA	NA	NA	NA
WP_002991016.1\|288186_289089_+	primosomal protein DnaI	S5MU12	Brevibacillus_phage	3.0e-30	32.2
WP_002991013.1\|289151_290462_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_023079517.1\|290668_293767_+	DEAD/DEAH box helicase	A0A0P0YMN2	Yellowstone_lake_phycodnavirus	2.2e-43	31.1
WP_011017350.1\|293881_295078_-\|integrase	site-specific integrase	A3F610	Streptococcus_phage	3.9e-227	99.0
WP_011017351.1\|295388_296129_-	type II toxin-antitoxin system PemK/MazF family toxin	A3F611	Streptococcus_phage	1.6e-130	100.0
WP_011017352.1\|296139_296532_-	hypothetical protein	A3F612	Streptococcus_phage	2.2e-38	68.7
WP_011017353.1\|296535_296886_-	helix-turn-helix transcriptional regulator	A0A1S5SAD3	Streptococcus_phage	1.2e-35	63.5
WP_011017354.1\|297174_297450_+	hypothetical protein	NA	NA	NA	NA
WP_011017355.1\|297484_297697_+	helix-turn-helix transcriptional regulator	M1Q1B4	Streptococcus_phage	1.7e-13	52.9
WP_032464978.1\|298024_298525_-	hypothetical protein	NA	NA	NA	NA
298070:298087	attL	NA	NA	NA	NA
WP_011017357.1\|298576_299296_+	ORF6C domain-containing protein	A3F617	Streptococcus_phage	4.6e-106	78.7
298070:298087	attL	NA	NA	NA	NA
WP_011054421.1\|299369_299627_+	hypothetical protein	A3F618	Streptococcus_phage	5.4e-41	98.8
WP_011017359.1\|299719_299911_+	hypothetical protein	NA	NA	NA	NA
WP_032461348.1\|300031_300220_+	hypothetical protein	NA	NA	NA	NA
WP_011106800.1\|300191_301547_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	9.3e-209	84.7
WP_011017361.1\|301539_302301_+	conserved phage C-terminal domain-containing protein	A0A220GFI5	Streptococcus_phage	9.1e-28	56.1
WP_011017362.1\|302300_303113_+	ATP-binding protein	A0A1P8VVV9	Streptococcus_phage	1.2e-121	77.6
WP_002986238.1\|303112_303340_+	hypothetical protein	C5J991	Streptococcus_phage	7.1e-13	50.7
WP_011017365.1\|303495_303939_+	hypothetical protein	A0A1C9LX52	Streptococcus_phage	1.6e-32	55.0
WP_023611649.1\|303935_304106_+	hypothetical protein	Q938M0	Temperate_phage	2.7e-09	55.4
WP_011017366.1\|304102_304372_+	hypothetical protein	A7J287	Streptococcus_phage	1.4e-28	80.9
WP_023611652.1\|304373_305006_+	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	5.9e-81	65.7
WP_011017368.1\|305010_305496_+	DUF1642 domain-containing protein	A0A1S5S9L5	Streptococcus_phage	5.6e-23	41.4
WP_011017369.1\|305492_305714_+	hypothetical protein	NA	NA	NA	NA
WP_011017370.1\|305710_306103_+	single-stranded DNA-binding protein	A0A1P8VVS8	Streptococcus_phage	6.9e-48	70.3
WP_011054431.1\|306117_306399_+	hypothetical protein	A3F632	Streptococcus_phage	4.5e-33	92.2
WP_011017371.1\|306395_306734_+	helix-turn-helix transcriptional regulator	A3F633	Streptococcus_phage	1.1e-54	92.9
WP_011017372.1\|306736_307564_+	prohibitin family protein	A3F634	Streptococcus_phage	1.3e-117	100.0
WP_011017373.1\|307578_307980_+	hypothetical protein	A3F635	Streptococcus_phage	2.7e-71	100.0
WP_011017374.1\|308139_308715_+\|integrase	site-specific integrase	A3F636	Streptococcus_phage	1.7e-106	99.0
WP_011017375.1\|308868_309162_+	hypothetical protein	NA	NA	NA	NA
WP_011017376.1\|309219_309423_+	hypothetical protein	NA	NA	NA	NA
WP_011017377.1\|309448_309835_+	hypothetical protein	A3F638	Streptococcus_phage	1.4e-64	93.0
WP_011054436.1\|309860_310133_+	HNH endonuclease	A3F639	Streptococcus_phage	4.8e-48	95.6
WP_011017379.1\|310274_310592_+\|terminase	P27 family phage terminase small subunit	A3F640	Streptococcus_phage	3.9e-49	99.0
WP_011017380.1\|310604_312335_+\|terminase	terminase large subunit	A3F641	Streptococcus_phage	0.0e+00	97.0
WP_032461344.1\|312325_312550_+	hypothetical protein	A3F642	Streptococcus_phage	2.0e-36	97.3
WP_011017381.1\|312702_313890_+\|portal	phage portal protein	A3F643	Streptococcus_phage	5.6e-218	96.2
WP_011017382.1\|313870_314677_+\|protease	Clp protease ClpP	A3F644	Streptococcus_phage	4.6e-147	98.1
WP_011017383.1\|314693_315827_+\|capsid	phage major capsid protein	A3F645	Streptococcus_phage	3.2e-202	96.8
WP_011017384.1\|315840_316014_+	hypothetical protein	A3F646	Streptococcus_phage	6.4e-22	94.7
WP_011017385.1\|316013_316322_+	hypothetical protein	A3F647	Streptococcus_phage	1.2e-47	99.0
WP_011017386.1\|316314_316677_+	hypothetical protein	A3F648	Streptococcus_phage	1.1e-60	97.5
WP_011017387.1\|316678_317077_+	HK97 gp10 family phage protein	A3F649	Streptococcus_phage	2.9e-70	100.0
WP_011017388.1\|317069_317450_+	hypothetical protein	A3F650	Streptococcus_phage	7.4e-63	99.2
WP_011017389.1\|317461_318046_+\|tail	tail protein	A3F651	Streptococcus_phage	3.1e-92	90.2
WP_011017390.1\|318138_318441_+	hypothetical protein	A3F652	Streptococcus_phage	1.8e-48	96.0
WP_011017391.1\|318666_322767_+\|tail	phage tail tape measure protein	A3F654	Streptococcus_phage	0.0e+00	66.5
WP_011017392.1\|322779_323550_+\|tail	phage tail family protein	A3F655	Streptococcus_phage	2.1e-128	87.5
WP_011017393.1\|323546_325598_+\|tail	phage tail protein	A3F656	Streptococcus_phage	0.0e+00	84.7
WP_011017394.1\|325594_326602_+	hyaluronoglucosaminidase	Q938K0	Temperate_phage	9.9e-115	64.9
WP_011017395.1\|326611_328516_+	gp58-like family protein	Q938J9	Temperate_phage	1.1e-210	83.7
WP_002988448.1\|328527_328956_+	DUF1617 family protein	Q938J8	Temperate_phage	8.1e-58	84.3
WP_011017396.1\|328958_329591_+	hypothetical protein	Q938J7	Temperate_phage	8.9e-45	50.0
WP_011017397.1\|329602_329875_+	hypothetical protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
WP_003058873.1\|329871_330099_+\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
WP_011017398.1\|330217_331435_+	glucosaminidase domain-containing protein	A0A1P8VVM5	Streptococcus_phage	9.1e-163	59.7
WP_009880239.1\|331556_332312_-	streptococcal pyrogenic exotoxin SpeA	A0A097PAT7	Streptococcus_pyogenes_phage	2.2e-143	100.0
332046:332063	attR	NA	NA	NA	NA
WP_011017399.1\|332531_332714_+	hypothetical protein	J7KBZ4	Streptococcus_phage	1.9e-16	74.6
332046:332063	attR	NA	NA	NA	NA
WP_011017400.1\|333022_333625_+	hypothetical protein	NA	NA	NA	NA
WP_011017401.1\|333664_334993_+	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_002985926.1\|335038_335521_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011184194.1\|335632_337207_+	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_002990993.1\|337279_337762_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_002985918.1\|338385_339309_-	membrane protein insertase YidC	NA	NA	NA	NA
WP_002990987.1\|339390_339669_-	acylphosphatase	NA	NA	NA	NA
WP_011017403.1\|339929_340667_+	RNA methyltransferase	NA	NA	NA	NA
WP_011017404.1\|340705_341206_+	HD domain-containing protein	NA	NA	NA	NA
WP_002985910.1\|341220_341910_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_002985908.1\|342087_342330_+	YneF family protein	NA	NA	NA	NA
WP_011017405.1\|342507_343302_+	glutamate racemase	NA	NA	NA	NA
WP_011017406.1\|343298_344285_+	nucleoside-triphosphate diphosphatase	NA	NA	NA	NA
WP_002985902.1\|344263_344785_+	metallophosphoesterase	NA	NA	NA	NA
WP_002985900.1\|344781_345243_+	CBS domain-containing protein	NA	NA	NA	NA
WP_002990974.1\|345239_345986_+	site-specific tyrosine recombinase XerD	NA	NA	NA	NA
WP_011017407.1\|345985_346690_+	segregation/condensation protein A	NA	NA	NA	NA
WP_002985894.1\|346686_347238_+	segregation/condensation protein B	NA	NA	NA	NA
WP_002990967.1\|347358_348081_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_011017409.1\|348077_348338_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.1e-17	50.6
WP_011017410.1\|348426_349461_+\|transposase	IS30 family transposase	H7BW61	unidentified_phage	4.8e-32	34.6
WP_011017411.1\|349604_350153_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_011017412.1\|350144_351170_-\|transposase	IS30-like element IS1239 family transposase	H7BW61	unidentified_phage	4.8e-32	34.6
WP_002990963.1\|351549_352113_+	ECF transporter S component	NA	NA	NA	NA
WP_011017413.1\|352114_352768_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_011017414.1\|353060_353981_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	9.9e-37	51.1
WP_002985878.1\|354019_354574_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	8.6e-36	41.7
WP_002990953.1\|354706_356041_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_010921923.1\|356118_356910_+	pyruvate formate lyase-activating protein	A0A2P0VNQ0	Tetraselmis_virus	5.9e-22	29.0
WP_002990948.1\|357040_357976_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
WP_011017415.1\|358051_358705_+	DUF1803 domain-containing protein	NA	NA	NA	NA
WP_023079525.1\|358749_359787_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	8.0e-19	29.6
WP_002990942.1\|359747_360800_-	iron ABC transporter permease	NA	NA	NA	NA
WP_011017417.1\|360789_361722_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002985861.1\|361747_362530_-	ABC transporter ATP-binding protein	A0A1V0SJ29	Klosneuvirus	7.4e-17	30.1
WP_002990934.1\|362775_364221_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA
WP_011017418.1\|364308_365943_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_002985854.1\|366109_366739_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002985850.1\|366962_367553_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.6e-54	55.7
WP_002985847.1\|368047_368323_+	YlbG family protein	NA	NA	NA	NA
WP_011017420.1\|368571_369207_+	dTMP kinase	M1PSC7	Streptococcus_phage	3.5e-65	63.4
WP_011017421.1\|369224_370100_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.9e-56	41.4
WP_011017422.1\|370118_370358_+	hypothetical protein	NA	NA	NA	NA
WP_011017424.1\|370762_371086_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	5.0e-28	58.5
WP_011017425.1\|371090_371954_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.7e-113	74.3
WP_011017426.1\|371980_372373_+	hypothetical protein	NA	NA	NA	NA
WP_011017427.1\|372419_373049_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_002990897.1\|373347_373704_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.1e-39	65.0
WP_011017428.1\|373777_374605_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	4.6e-126	78.4
WP_002985826.1\|374838_376020_+	L-lactate oxidase	NA	NA	NA	NA
WP_011017429.1\|376286_381230_+\|protease	CXC chemokine-degrading serine protease SpyCEP	NA	NA	NA	NA
WP_002985820.1\|381998_382706_+	DUF1275 domain-containing protein	NA	NA	NA	NA
WP_072135470.1\|382945_384946_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	6.0e-87	35.1
WP_011017431.1\|385439_386453_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	9.4e-97	52.7
WP_002990870.1\|386456_386945_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	1.3e-11	37.5
WP_011017432.1\|386911_389092_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	5.2e-169	42.9
WP_011017434.1\|390506_390857_+	hypothetical protein	NA	NA	NA	NA
WP_011017435.1\|391271_391523_+	hypothetical protein	NA	NA	NA	NA
WP_011017436.1\|391616_392117_-	hypothetical protein	NA	NA	NA	NA
WP_002990844.1\|392478_392715_+	DUF2829 domain-containing protein	NA	NA	NA	NA
WP_011017438.1\|392707_393406_+	3-oxoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	7.1e-11	25.6
WP_011017439.1\|393481_394441_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_011017440.1\|394773_396111_+	MFS transporter	NA	NA	NA	NA
WP_011017441.1\|396283_397666_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L4K9	Tupanvirus	8.5e-32	36.0
WP_011017442.1\|397699_398254_+	NUDIX hydrolase	NA	NA	NA	NA
WP_002990826.1\|398253_398505_+	hypothetical protein	NA	NA	NA	NA
WP_011017443.1\|398524_399220_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_011017444.1\|399370_399712_+	hypothetical protein	NA	NA	NA	NA
WP_011017445.1\|399812_400460_-	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_011017446.1\|400605_401538_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011017447.1\|401601_402327_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	4.0e-17	32.1
WP_011017448.1\|402327_403182_+	metal ABC transporter permease	NA	NA	NA	NA
WP_011017449.1\|403329_404136_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.5e-20	36.6
WP_011017450.1\|404352_406758_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	3.8e-88	51.7
WP_011017451.1\|406827_407181_-	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_002990800.1\|407424_407850_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_002985768.1\|407955_408645_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_002985765.1\|408966_409695_+	UMP kinase	NA	NA	NA	NA
WP_011017452.1\|409723_410281_+	ribosome recycling factor	NA	NA	NA	NA
WP_011017453.1\|410389_411247_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_002985759.1\|411319_411829_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002985757.1\|411825_412041_+	YozE family protein	NA	NA	NA	NA
WP_011017454.1\|412196_413378_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	2.1e-15	39.6
WP_011017455.1\|413692_415465_+	oleate hydratase	NA	NA	NA	NA
WP_011017456.1\|415623_416676_+	PhoH family protein	W8D063	Erwinia_phage	1.2e-46	50.0
WP_011017457.1\|416721_417297_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_002985748.1\|417455_417953_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_002985746.1\|417933_418341_+	diacylglycerol kinase	NA	NA	NA	NA
WP_002985743.1\|418460_419357_+	GTPase Era	NA	NA	NA	NA
WP_002985741.1\|419376_419853_+	NUDIX hydrolase	NA	NA	NA	NA
WP_023079527.1\|421003_421450_-	ATP-binding cassette domain-containing protein	F2Y302	Organic_Lake_phycodnavirus	4.1e-12	36.0
WP_023079528.1\|421672_422374_-	ABC transporter transmembrane region	NA	NA	NA	NA
WP_002994577.1\|422478_422715_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_002994580.1\|423012_423237_+\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_002994581.1\|423214_423391_+	hypothetical protein	NA	NA	NA	NA
WP_072135613.1\|423634_423997_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_028797129.1\|424607_424835_+\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_002994587.1\|424883_425201_+	hypothetical protein	NA	NA	NA	NA
WP_072135509.1\|425357_425549_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_041174225.1\|425581_425935_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.1e-07	36.2
WP_079992685.1\|425953_426151_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	1.4e-09	47.5
WP_011184657.1\|426190_426406_+\|transposase	transposase	U5P429	Shigella_phage	2.0e-09	43.9
WP_002992578.1\|428265_429015_+	response regulator transcription factor	A0A1V0E029	Clostridioides_phage	2.1e-21	28.0
WP_011017461.1\|429015_430350_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_011017462.1\|430497_430623_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_011017463.1\|432073_434227_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	4.1e-41	27.9
WP_002992018.1\|434513_434741_+\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_002985729.1\|434753_434954_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_032465693.1\|435966_436401_+	hypothetical protein	NA	NA	NA	NA
WP_032465692.1\|436618_437689_+	hypothetical protein	NA	NA	NA	NA
WP_009880375.1\|437781_438180_+	hypothetical protein	NA	NA	NA	NA
WP_011017467.1\|438528_438798_-	quorum-sensing system protein StcA	NA	NA	NA	NA
WP_128650799.1\|439711_439780_-	peptide pheromone SHP2	NA	NA	NA	NA
WP_002990747.1\|439868_440735_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_002990742.1\|440906_441734_+	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	5.1e-16	27.5
WP_011017469.1\|441730_442324_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_011017470.1\|442513_444016_+	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	3.9e-75	41.6
WP_023079532.1\|444137_445331_+	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_002990729.1\|445327_445474_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_002985700.1\|445519_445756_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_011017472.1\|445849_448183_+	ribonuclease R	Q0GXV6	Lactococcus_phage	8.8e-90	39.6
WP_011017473.1\|448185_448653_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.4e-39	56.3
WP_010921981.1\|448658_449378_+	glutaminyl-peptide cyclotransferase	NA	NA	NA	NA
WP_011017474.1\|449492_450140_-	pyroglutamyl-peptidase I	NA	NA	NA	NA
WP_011017475.1\|450189_451116_-	DUF979 family protein	NA	NA	NA	NA
WP_011017476.1\|451115_451799_-	DUF969 domain-containing protein	NA	NA	NA	NA
WP_011017477.1\|452009_452936_-	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	2.0e-77	47.5
WP_002985686.1\|453080_453458_-	VOC family protein	NA	NA	NA	NA
WP_002985684.1\|453468_454134_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_002985682.1\|454182_455268_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_011017478.1\|455298_456309_-\|transposase	IS30-like element IS1239 family transposase	H7BW61	unidentified_phage	4.7e-32	34.6
WP_002985680.1\|456527_457529_+	catabolite control protein A	C6ZCU4	Enterobacteria_phage	6.1e-24	28.5
WP_011017479.1\|457659_458658_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_011017480.1\|458659_459994_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_002985672.1\|460414_462358_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.0e-120	38.7
WP_011017481.1\|462358_463360_-\|transposase	IS30-like element IS1239 family transposase	H7BW61	unidentified_phage	4.7e-32	34.6

DBSCAN-SWA_3

563360 : 617896

Streptococcus_phage(60.0%)

terminase,head,portal,tRNA,holin,tail,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011017556.1\|563360_564485_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_096466706.1\|564553_565651_+	peptide chain release factor 2	NA	NA	NA	NA
WP_002985455.1\|565670_566363_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	1.0e-30	35.6
WP_002990498.1\|566355_567285_+	ABC transporter permease	NA	NA	NA	NA
WP_011017557.1\|567595_568294_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	7.2e-80	63.3
WP_002993974.1\|568461_569226_+	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA
WP_011017558.1\|569333_571835_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	2.4e-202	47.9
WP_011017559.1\|572169_573363_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_002985437.1\|573383_574730_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.1e-55	30.8
WP_011017560.1\|575143_576034_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	8.8e-06	29.8
WP_011017561.1\|576030_577008_+	YvcK family protein	A1IMD5	Streptococcus_phage	1.2e-138	74.2
WP_011017562.1\|577004_577916_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.9e-105	64.4
WP_011017563.1\|578092_579508_-	recombinase family protein	A5GZ62	Lactococcus_phage	1.4e-109	47.2
WP_002985420.1\|579630_579936_-	membrane protein	NA	NA	NA	NA
WP_002985417.1\|579945_580710_-	helix-turn-helix transcriptional regulator	E8ZDN4	Streptococcus_phage	2.0e-83	64.5
WP_002985414.1\|581069_581228_+	hypothetical protein	J7KH24	Streptococcus_phage	7.1e-20	88.5
WP_001008979.1\|581326_581968_-	hypothetical protein	J7KJ31	Streptococcus_phage	1.5e-116	100.0
WP_002985407.1\|582019_582208_+	helix-turn-helix transcriptional regulator	A0A0B5A7F0	Streptococcus_phage	2.6e-13	63.3
WP_002985404.1\|582256_583018_+	phage repressor protein/antirepressor Ant	A0A0C5AEJ9	Bacteriophage	1.6e-85	61.9
WP_011889039.1\|583158_583341_-	hypothetical protein	NA	NA	NA	NA
WP_002985395.1\|583427_583565_+	hypothetical protein	NA	NA	NA	NA
WP_002985392.1\|583566_583752_+	hypothetical protein	Q938N3	Temperate_phage	2.0e-21	83.6
WP_011017564.1\|584234_584621_+	DnaD domain-containing protein	Q938N2	Temperate_phage	8.1e-25	51.9
WP_002988350.1\|584601_584835_+	hypothetical protein	Q938N1	Temperate_phage	1.8e-35	94.8
WP_002988354.1\|584831_584972_+	hypothetical protein	A0A1X9I6Y1	Streptococcus_phage	3.4e-05	54.5
WP_011017565.1\|584980_585187_+	hypothetical protein	NA	NA	NA	NA
WP_010922475.1\|585242_585575_+	hypothetical protein	J7KGX3	Streptococcus_phage	2.2e-42	78.7
WP_010922474.1\|585574_586564_+	recombinase RecT	A0A286QMX3	Streptococcus_phage	5.8e-59	44.2
WP_000594115.1\|586560_586761_+	hypothetical protein	NA	NA	NA	NA
WP_011017566.1\|586753_587551_+	PD-(D/E)XK nuclease-like domain-containing protein	J7KGZ1	Streptococcus_phage	3.0e-130	84.5
WP_002985383.1\|587727_588069_+	hypothetical protein	M1NS23	Streptococcus_phage	3.1e-12	38.7
WP_002985380.1\|588065_588578_+	hypothetical protein	Q708P9	Streptococcus_phage	8.4e-62	73.2
WP_011017567.1\|588564_588762_+	hypothetical protein	A3F626	Streptococcus_phage	9.9e-11	86.5
WP_011017568.1\|588755_589040_+	DUF3310 domain-containing protein	A0A1P8VVP5	Streptococcus_phage	7.0e-50	100.0
WP_002987593.1\|589036_589306_+	hypothetical protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
WP_011017569.1\|589315_589729_+	hypothetical protein	Q938M1	Temperate_phage	6.4e-36	65.2
WP_011017570.1\|589725_590010_+	hypothetical protein	A3F628	Streptococcus_phage	4.6e-33	79.8
WP_011017571.1\|590013_590496_+	class I SAM-dependent methyltransferase	A0A097PAU8	Streptococcus_pyogenes_phage	9.6e-92	98.8
WP_021299463.1\|590485_591250_+	site-specific DNA-methyltransferase	A0A1S5SE41	Streptococcus_phage	4.2e-134	92.3
WP_011017573.1\|591297_592023_+	DUF1642 domain-containing protein	Q938L9	Temperate_phage	3.1e-25	44.8
WP_002987493.1\|592019_592190_+	hypothetical protein	A0A097PAS8	Streptococcus_pyogenes_phage	2.9e-27	100.0
WP_011017574.1\|592465_592903_+	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	6.7e-76	97.9
WP_011017575.1\|593485_594415_+	DNA adenine methylase	A0A126HAU2	Lactococcus_phage	4.9e-100	71.8
WP_011017576.1\|594541_594919_-	type II toxin-antitoxin system HicB family antitoxin	I3NLB2	Bifidobacterium_phage	3.3e-15	44.0
WP_001132273.1\|594970_595156_-	type II toxin-antitoxin system HicA family toxin	D6PSW1	Lactobacillus_phage	1.7e-09	54.0
WP_002985375.1\|595391_595730_+	HNH endonuclease	J7KH36	Streptococcus_phage	3.0e-55	90.7
WP_002985371.1\|595900_596368_+\|terminase	phage terminase small subunit P27 family	J7KC46	Streptococcus_phage	3.9e-82	98.7
WP_002985368.1\|596370_596601_+	hypothetical protein	NA	NA	NA	NA
WP_024623442.1\|596604_598359_+	amino acid transporter	J7KKD1	Streptococcus_phage	0.0e+00	96.1
WP_002985365.1\|598355_598526_+	hypothetical protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
WP_002985363.1\|598518_598743_+	hypothetical protein	Q938K9	Temperate_phage	3.6e-17	61.4
WP_011017578.1\|598776_599997_+\|portal	phage portal protein	J7KDU3	Streptococcus_phage	6.9e-187	81.9
WP_011017579.1\|599974_600640_+\|protease	Clp protease ClpP	M1Q115	Streptococcus_phage	3.5e-92	78.1
WP_011017580.1\|600664_601852_+\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	1.3e-158	74.7
WP_011017581.1\|601996_602299_+\|head,tail	phage head-tail connector protein	J7KC36	Streptococcus_phage	1.3e-41	88.8
WP_011017582.1\|602295_602643_+\|head	phage head closure protein	J7KJ42	Streptococcus_phage	2.9e-50	88.2
WP_011017583.1\|602639_603017_+	HK97 gp10 family phage protein	J7KDM3	Streptococcus_phage	5.3e-45	72.0
WP_011017584.1\|603013_603439_+	hypothetical protein	J7KBZ9	Streptococcus_phage	7.2e-67	84.4
WP_011017585.1\|603454_604063_+	hypothetical protein	J7KKC8	Streptococcus_phage	6.7e-74	71.9
WP_011017586.1\|604115_604442_+	hypothetical protein	J7KK85	Streptococcus_phage	8.3e-39	75.0
WP_021299462.1\|604489_604639_+	hypothetical protein	J7KBS0	Streptococcus_phage	1.7e-15	85.7
WP_002985338.1\|604651_608575_+\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	1.9e-238	48.5
WP_011017588.1\|609348_611325_+\|tail	phage tail protein	Q938K1	Temperate_phage	0.0e+00	94.5
WP_011017589.1\|611321_612332_+	hyaluronoglucosaminidase	Q938K0	Temperate_phage	7.8e-136	75.8
WP_011017590.1\|612344_614231_+	gp58-like family protein	Q938J9	Temperate_phage	3.1e-218	84.9
WP_041174229.1\|614242_614671_+	DUF1617 family protein	Q938J8	Temperate_phage	9.2e-62	89.3
WP_011017592.1\|614673_615291_+	DUF1366 domain-containing protein	Q938J7	Temperate_phage	5.0e-77	89.3
WP_002987582.1\|615300_615576_+	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
WP_000609113.1\|615572_615800_+\|holin	phage holin	A7J2B3	Streptococcus_phage	5.8e-31	98.7
WP_002985329.1\|615915_617121_+	glucosaminidase domain-containing protein	Q938J4	Temperate_phage	1.6e-204	83.3
WP_002985327.1\|617188_617896_-	streptococcal pyrogenic exotoxin SpeC	A0A097PAT7	Streptococcus_pyogenes_phage	3.9e-09	27.1

DBSCAN-SWA_4

702893 : 710293

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050579048.1\|702893_705104_-	LTA synthase family protein	W6LM83	Streptococcus_phage	9.4e-267	68.8
WP_002985142.1\|705211_706375_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
WP_002985140.1\|706371_707058_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
WP_002992640.1\|707151_708318_+	chorismate synthase	A0A291AU41	Pandoravirus	5.8e-34	32.8
WP_002985134.1\|708378_708720_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	40.2
WP_011017639.1\|708940_710293_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	7.0e-31	24.2

DBSCAN-SWA_5

1007788 : 1091243

Streptococcus_phage(37.1%)

terminase,integrase,head,holin,tRNA,portal,tail,capsid

attL 1041142:1041201|attR 1087782:1087880

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002989678.1\|1007788_1008673_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_011017818.1\|1008788_1010129_-	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_011017819.1\|1010225_1011182_-	aromatic acid exporter family protein	NA	NA	NA	NA
WP_011017820.1\|1011192_1011789_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_011017821.1\|1011880_1014517_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_011017822.1\|1014531_1015233_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.9e-36	39.8
WP_011017823.1\|1015350_1015893_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002984480.1\|1016035_1016677_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_011017825.1\|1016839_1017328_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_011017826.1\|1017338_1017539_-	CsbD family protein	J7KJ36	Streptococcus_phage	3.6e-08	53.0
WP_002984475.1\|1017579_1018119_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002984473.1\|1018131_1018320_-	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_002984470.1\|1018330_1018942_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_002984469.1\|1018978_1019227_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_011017827.1\|1019589_1021908_-	DNA helicase PcrA	A7KV33	Bacillus_phage	2.7e-131	41.0
WP_011017828.1\|1022438_1023761_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_011017829.1\|1023880_1025116_+	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_011017830.1\|1025485_1026259_-	CAMP factor pore-forming toxin Cfa	NA	NA	NA	NA
WP_011017831.1\|1026627_1027464_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002984457.1\|1027479_1028109_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-27	35.5
WP_002984455.1\|1028118_1028760_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_011017832.1\|1028866_1029202_-	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_011017833.1\|1029397_1031212_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	5.2e-98	38.9
WP_002984449.1\|1031387_1031945_-	signal peptidase I	NA	NA	NA	NA
WP_002984447.1\|1032162_1033665_-	pyruvate kinase	NA	NA	NA	NA
WP_002984444.1\|1033727_1034741_-	6-phosphofructokinase	NA	NA	NA	NA
WP_011017834.1\|1034820_1037931_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	1.9e-119	29.9
WP_002989617.1\|1038115_1038487_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002984437.1\|1038486_1039185_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	6.6e-09	27.3
WP_011017835.1\|1039194_1039980_+	hypothetical protein	NA	NA	NA	NA
WP_002989607.1\|1040106_1040721_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	6.2e-51	52.3
1041142:1041201	attL	NA	NA	NA	NA
WP_011017836.1\|1041279_1041501_-	hypothetical protein	A3F673	Streptococcus_phage	1.1e-21	84.7
WP_011017837.1\|1041615_1042404_-	streptococcal pyrogenic exotoxin SpeL	Q938J1	Temperate_phage	5.3e-47	41.4
WP_011017838.1\|1042685_1043399_-	streptococcal pyrogenic exotoxin SpeM	Q938J1	Temperate_phage	6.9e-78	59.8
WP_011017839.1\|1043702_1044569_-	DUF334 domain-containing protein	Q938J2	Temperate_phage	2.2e-131	98.6
WP_011017840.1\|1044556_1045081_-	DUF4065 domain-containing protein	Q938J3	Temperate_phage	4.0e-99	100.0
WP_011017842.1\|1045974_1046667_-	AP2 domain-containing protein	A0A2H4J2S8	uncultured_Caudovirales_phage	3.2e-32	34.2
WP_002994486.1\|1046899_1047457_-	glycoside hydrolase family 73 protein	Q938J4	Temperate_phage	2.8e-95	88.1
WP_011017843.1\|1047572_1047800_-\|holin	phage holin	A7J2B3	Streptococcus_phage	7.6e-31	98.7
WP_002987582.1\|1047796_1048072_-	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
WP_011017844.1\|1048087_1048699_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	4.4e-81	90.1
WP_002987333.1\|1048701_1048863_-	hypothetical protein	NA	NA	NA	NA
WP_011017846.1\|1050790_1051789_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	6.8e-108	63.3
WP_011017847.1\|1051785_1053837_-\|tail	phage tail protein	A3F656	Streptococcus_phage	0.0e+00	84.6
WP_011017848.1\|1053833_1054613_-\|tail	phage tail family protein	A3F655	Streptococcus_phage	1.1e-65	54.5
WP_011017851.1\|1058295_1058625_-	hypothetical protein	A0A1P8BLR3	Lactococcus_phage	2.0e-11	40.6
WP_011017852.1\|1058654_1059014_-\|tail	tail assembly chaperone	D7RWD6	Brochothrix_phage	3.3e-20	44.6
WP_011017853.1\|1059066_1059672_-\|tail	phage major tail protein, TP901-1 family	D7RWD5	Brochothrix_phage	4.4e-41	52.2
WP_011017854.1\|1059687_1060077_-	hypothetical protein	B5SP36	Lactococcus_phage	3.5e-44	67.4
WP_011017855.1\|1060073_1060439_-	HK97 gp10 family phage protein	A0A097BY98	Enterococcus_phage	2.2e-16	45.5
WP_002984393.1\|1060419_1060728_-	hypothetical protein	A0A2P1JTW8	Anoxybacillus_phage	5.7e-13	40.2
WP_011017856.1\|1060724_1061078_-\|head,tail	phage head-tail connector protein	A0A2H4J002	uncultured_Caudovirales_phage	1.7e-24	55.1
WP_011017857.1\|1061091_1061334_-	hypothetical protein	NA	NA	NA	NA
WP_011017858.1\|1061343_1062423_-\|capsid	major capsid protein	A0A286QR01	Streptococcus_phage	1.9e-108	57.3
WP_011017859.1\|1062425_1062806_-	hypothetical protein	NA	NA	NA	NA
WP_002984384.1\|1062815_1063349_-	DUF4355 domain-containing protein	A0A141E0S7	Streptococcus_phage	1.4e-14	83.9
WP_011017860.1\|1063460_1064204_-	phage repressor protein/antirepressor Ant	M1PKL6	Streptococcus_phage	5.3e-73	56.9
WP_002984380.1\|1064205_1064454_-	hypothetical protein	NA	NA	NA	NA
WP_011017861.1\|1064568_1064748_-	hypothetical protein	M1NRK8	Streptococcus_phage	2.6e-18	79.7
WP_002984375.1\|1064843_1065113_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	2.3e-34	84.1
WP_010922213.1\|1065172_1065352_-	hypothetical protein	NA	NA	NA	NA
WP_011017862.1\|1065342_1066968_-\|head	phage head morphogenesis protein	U6E9F1	Streptococcus_phage	3.8e-47	44.2
WP_011017863.1\|1066948_1068451_-\|portal	phage portal protein	C9W9H5	Streptococcus_virus	1.9e-141	54.5
WP_041174232.1\|1068462_1069752_-\|terminase	PBSX family phage terminase large subunit	A0A2H4IYR5	uncultured_Caudovirales_phage	1.4e-182	74.5
WP_011017865.1\|1069729_1070212_-\|terminase	terminase small subunit	E0Y3R8	Staphylococcus_virus	1.5e-15	40.3
WP_011017866.1\|1070754_1071195_-	ArpU family transcriptional regulator	Q938L8	Temperate_phage	5.0e-79	100.0
WP_011017867.1\|1071219_1071648_-	DUF1642 domain-containing protein	A0A097PAV5	Streptococcus_pyogenes_phage	2.2e-10	39.2
WP_011017868.1\|1071650_1072283_-	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	2.4e-82	66.7
WP_011017869.1\|1072284_1072551_-	hypothetical protein	A7J287	Streptococcus_phage	9.5e-17	60.5
WP_011017870.1\|1072547_1072718_-	hypothetical protein	Q938M0	Temperate_phage	9.4e-10	93.5
WP_011017871.1\|1072714_1073128_-	hypothetical protein	Q938M1	Temperate_phage	1.7e-33	59.0
WP_011017872.1\|1073111_1073399_-	DUF1599 domain-containing protein	J7KDH9	Streptococcus_phage	1.5e-31	73.9
WP_011017873.1\|1073640_1073997_-	hypothetical protein	A0A097PAU4	Streptococcus_pyogenes_phage	1.6e-59	97.5
WP_002984338.1\|1073980_1074331_-	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	2.6e-46	89.4
WP_014635521.1\|1074284_1075154_-	bifunctional DNA primase/polymerase	A0A1P8BME8	Lactococcus_phage	5.8e-103	65.6
WP_011017876.1\|1075422_1076976_-	hypothetical protein	A0A1P8BM51	Lactococcus_phage	1.5e-210	70.6
WP_011017877.1\|1076993_1077476_-	DUF669 domain-containing protein	A0A1P8BM40	Lactococcus_phage	2.2e-59	70.1
WP_061104380.1\|1077480_1078884_-	DEAD/DEAH box helicase	A0A1P8BMH7	Lactococcus_phage	4.6e-195	72.3
WP_011017879.1\|1078919_1079603_-	AAA family ATPase	J7KC09	Streptococcus_phage	3.6e-124	98.6
WP_002984318.1\|1079599_1079884_-	hypothetical protein	NA	NA	NA	NA
WP_002984315.1\|1079880_1080075_-	hypothetical protein	J7KK69	Streptococcus_phage	3.9e-12	54.2
WP_002984312.1\|1080074_1080404_-	hypothetical protein	A1EAC2	Streptococcus_phage	2.7e-13	41.6
WP_011017881.1\|1080484_1080622_-	hypothetical protein	A0A097PAR2	Streptococcus_pyogenes_phage	3.4e-18	100.0
WP_011017882.1\|1080618_1080915_-	hypothetical protein	A0A097PAT8	Streptococcus_pyogenes_phage	3.1e-48	98.0
WP_011017883.1\|1080992_1081169_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023079659.1\|1081310_1081529_+	hypothetical protein	NA	NA	NA	NA
WP_002984292.1\|1081704_1081914_+	hypothetical protein	NA	NA	NA	NA
WP_011017884.1\|1082172_1082682_+	hypothetical protein	NA	NA	NA	NA
WP_011017885.1\|1082812_1083022_+	hypothetical protein	NA	NA	NA	NA
WP_002992770.1\|1083131_1083332_-	helix-turn-helix transcriptional regulator	A0A141E205	Streptococcus_phage	2.7e-08	59.6
WP_011017887.1\|1083429_1084113_+	DUF4145 domain-containing protein	A0A1X9I5M7	Streptococcus_phage	1.2e-71	59.4
WP_011017888.1\|1084239_1084398_-	hypothetical protein	A0A097PAP2	Streptococcus_pyogenes_phage	1.5e-22	94.2
WP_011017889.1\|1084754_1085579_+	helix-turn-helix transcriptional regulator	A0A097PBE5	Streptococcus_pyogenes_phage	1.9e-124	88.9
WP_002984270.1\|1085591_1086401_+	type II toxin-antitoxin system PemK/MazF family toxin	J7KDP1	Streptococcus_phage	3.8e-24	35.8
WP_011017891.1\|1086650_1087739_+\|integrase	site-specific integrase	Q38159	Streptococcus_phage	4.2e-204	99.4
WP_011017892.1\|1088101_1088722_+	DUF3862 domain-containing protein	NA	NA	NA	NA
1087782:1087880	attR	NA	NA	NA	NA
WP_011017893.1\|1088978_1091243_-	glycogen/starch/alpha-glucan family phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.2e-11	43.7

DBSCAN-SWA_6

1165696 : 1244130

Streptococcus_phage(59.32%)

terminase,integrase,holin,tRNA,portal,tail,protease,capsid

attL 1206171:1206190|attR 1241503:1241522

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002984013.1\|1165696_1166392_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_011017935.1\|1166410_1167181_-	DUF3169 family protein	NA	NA	NA	NA
WP_011054648.1\|1167177_1167393_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011017937.1\|1167752_1170371_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.0e-62	34.1
WP_011017938.1\|1170757_1171813_-	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_011017939.1\|1171875_1172583_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	2.6e-08	27.2
WP_002995765.1\|1172648_1173845_-	OFA family MFS transporter	NA	NA	NA	NA
WP_011017940.1\|1174220_1176026_-	oligoendopeptidase F	NA	NA	NA	NA
WP_011017941.1\|1176038_1177001_-	competence protein CoiA	NA	NA	NA	NA
WP_041174236.1\|1177295_1178012_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_011017943.1\|1178130_1178835_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_002983989.1\|1179036_1180065_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_011017944.1\|1180071_1181292_+	DUF3114 domain-containing protein	NA	NA	NA	NA
WP_011017945.1\|1181405_1181996_-	serine hydrolase	NA	NA	NA	NA
WP_011017946.1\|1181992_1182241_-	hypothetical protein	NA	NA	NA	NA
WP_011017948.1\|1182609_1183215_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.8e-58	53.2
WP_011017949.1\|1183311_1184352_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_011017950.1\|1184422_1186666_-	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	1.8e-55	59.2
WP_002983967.1\|1186646_1187309_-	ComEA family DNA-binding protein	NA	NA	NA	NA
WP_041174237.1\|1187507_1188248_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_032465698.1\|1188287_1189142_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_011017953.1\|1189131_1189410_+	GIY-YIG nuclease family protein	W8W2G4	Invertebrate_iridovirus	7.9e-06	36.0
WP_011017954.1\|1189433_1191434_-	potassium transporter Kup	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	6.4e-65	34.0
WP_002989158.1\|1191560_1193180_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.5
WP_011017955.1\|1193486_1195031_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	1.1e-35	29.1
WP_011017956.1\|1195278_1195974_-	TIGR02206 family membrane protein	NA	NA	NA	NA
WP_011017957.1\|1196053_1197445_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_011017958.1\|1197643_1198690_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_002983939.1\|1198790_1199387_-	recombination protein RecR	NA	NA	NA	NA
WP_011017959.1\|1200466_1201009_-	hypothetical protein	NA	NA	NA	NA
WP_011017960.1\|1201169_1201691_-	transcription repressor NadR	NA	NA	NA	NA
WP_002983928.1\|1201797_1202493_-	phosphoglycerate mutase	NA	NA	NA	NA
WP_011017961.1\|1202731_1203667_+	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	1.8e-65	45.1
WP_011017963.1\|1203966_1205829_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.4e-90	34.0
1206171:1206190	attL	NA	NA	NA	NA
WP_011017964.1\|1206359_1206542_-	hypothetical protein	A3F673	Streptococcus_phage	1.4e-19	76.7
WP_011017965.1\|1206781_1207582_+	streptodornase Sda3	NA	NA	NA	NA
WP_011017966.1\|1207850_1208285_+	hypothetical protein	NA	NA	NA	NA
WP_011017967.1\|1208354_1209560_-	glucosaminidase domain-containing protein	Q938J4	Temperate_phage	3.5e-207	84.3
WP_000609113.1\|1209675_1209903_-\|holin	phage holin	A7J2B3	Streptococcus_phage	5.8e-31	98.7
WP_002987582.1\|1209899_1210175_-	hypothetical protein	A7J2B2	Streptococcus_phage	2.6e-41	100.0
WP_011017592.1\|1210184_1210802_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	5.0e-77	89.3
WP_011017968.1\|1210804_1211236_-	DUF1617 family protein	Q938J8	Temperate_phage	1.1e-70	97.2
WP_011017969.1\|1211247_1213032_-	hypothetical protein	Q938J9	Temperate_phage	2.4e-95	47.3
WP_011017970.1\|1213046_1214048_-	hyaluronoglucosaminidase	Q938K0	Temperate_phage	2.3e-127	71.3
WP_032465685.1\|1214047_1216021_-\|tail	phage tail protein	M1PKG3	Streptococcus_phage	3.9e-99	49.4
WP_011017972.1\|1216002_1216698_-	hypothetical protein	A0A1B1P761	Bacillus_phage	6.2e-07	33.3
WP_011017973.1\|1218710_1219271_-	HNH endonuclease	A0A1B1IM39	Lactococcus_phage	1.0e-84	84.4
WP_002991560.1\|1219371_1219971_-	hypothetical protein	Q38126	Lactococcus_phage	3.6e-56	64.3
WP_010922454.1\|1219970_1220342_-	DUF5361 domain-containing protein	M1PL84	Streptococcus_phage	2.9e-35	62.4
WP_010922455.1\|1220356_1220620_-	hypothetical protein	A0A0B5A2F3	Streptococcus_phage	1.0e-18	55.8
WP_010922456.1\|1220630_1221224_-\|tail	tail protein	M1PKG8	Streptococcus_phage	3.5e-59	62.5
WP_011017974.1\|1221235_1221571_-	hypothetical protein	A0A1P8BMR5	Lactococcus_phage	4.9e-34	64.0
WP_010922457.1\|1221571_1221808_-	hypothetical protein	A0A0B5A7G2	Streptococcus_phage	2.5e-21	71.4
WP_011285617.1\|1221800_1222139_-	hypothetical protein	M1PFF8	Streptococcus_phage	2.2e-42	70.3
WP_010922459.1\|1222098_1222521_-	phage Gp19/Gp15/Gp42 family protein	A0A0B5A2F6	Streptococcus_phage	3.7e-47	70.8
WP_010922460.1\|1222530_1222731_-	hypothetical protein	NA	NA	NA	NA
WP_011017975.1\|1222730_1223642_-\|capsid	phage major capsid protein	M1PFL0	Streptococcus_phage	2.2e-113	67.0
WP_010922462.1\|1223666_1224128_-	DUF4355 domain-containing protein	M1Q1L0	Streptococcus_phage	4.5e-38	53.2
WP_011017976.1\|1224209_1225625_-\|terminase	terminase	A0A0B5A091	Streptococcus_phage	8.5e-213	74.0
WP_011888764.1\|1225706_1225943_-	hypothetical protein	M1IRA5	Streptococcus_phage	1.2e-31	80.3
WP_002986828.1\|1225944_1226211_-	hypothetical protein	Q938K9	Temperate_phage	6.4e-37	95.5
WP_023079491.1\|1226203_1226356_-	hypothetical protein	NA	NA	NA	NA
WP_002994100.1\|1226432_1226657_-	hypothetical protein	NA	NA	NA	NA
WP_011017978.1\|1226662_1228156_-	hypothetical protein	M1Q184	Streptococcus_phage	3.7e-89	55.6
WP_011017979.1\|1228148_1229417_-\|portal	phage portal protein	A0A1X9I693	Streptococcus_phage	2.4e-190	76.2
WP_002994106.1\|1229413_1229770_-	hypothetical protein	M1PRL3	Streptococcus_phage	2.4e-07	57.8
WP_011017980.1\|1229919_1230264_-	HNH endonuclease	M1Q0W7	Streptococcus_phage	2.5e-41	69.4
WP_003047501.1\|1230371_1230791_-	DUF1492 domain-containing protein	A0A1X9I5B5	Streptococcus_phage	6.0e-58	81.3
WP_011017981.1\|1230866_1231118_-	hypothetical protein	M1PF60	Streptococcus_phage	9.6e-19	59.0
WP_050579046.1\|1231114_1231618_-	DUF1642 domain-containing protein	Q938L9	Temperate_phage	1.4e-24	42.2
WP_079992696.1\|1231716_1232466_-	site-specific DNA-methyltransferase	Q9MCL7	Streptococcus_virus	2.3e-132	90.3
WP_011017984.1\|1232468_1232711_-	hypothetical protein	A7J287	Streptococcus_phage	7.3e-24	75.0
WP_011017986.1\|1232910_1233423_-	hypothetical protein	Q708P9	Streptococcus_phage	8.2e-65	77.4
WP_011888757.1\|1233419_1233761_-	hypothetical protein	M1NS23	Streptococcus_phage	3.1e-12	38.7
WP_011017988.1\|1233938_1234106_-	hypothetical protein	A0A1S5SEF3	Streptococcus_phage	4.7e-06	50.0
WP_011017989.1\|1234115_1234913_-	PD-(D/E)XK nuclease-like domain-containing protein	J7KGZ1	Streptococcus_phage	1.3e-138	89.8
WP_011017990.1\|1234909_1235839_-	recombinase RecT	M1NRN6	Streptococcus_phage	3.5e-90	71.4
WP_011017991.1\|1235841_1236171_-	hypothetical protein	J7KGX3	Streptococcus_phage	1.7e-47	87.2
WP_002990074.1\|1236226_1236433_-	hypothetical protein	NA	NA	NA	NA
WP_011017992.1\|1236441_1236582_-	hypothetical protein	NA	NA	NA	NA
WP_010922205.1\|1236578_1236812_-	hypothetical protein	Q938N1	Temperate_phage	2.8e-36	96.1
WP_011017564.1\|1236792_1237179_-	DnaD domain-containing protein	Q938N2	Temperate_phage	8.1e-25	51.9
WP_010922477.1\|1237682_1237868_-	hypothetical protein	Q938N3	Temperate_phage	1.3e-20	83.6
WP_010922478.1\|1237869_1238181_-	excisionase	A0A1S5SA25	Streptococcus_phage	5.3e-43	77.7
WP_010922479.1\|1238450_1238663_-	helix-turn-helix transcriptional regulator	A0A1X9I583	Streptococcus_phage	1.1e-10	56.7
WP_010922480.1\|1238864_1239620_+	helix-turn-helix transcriptional regulator	A0A1S5S8S8	Streptococcus_phage	2.8e-77	60.8
WP_010922481.1\|1239631_1240150_+	HIRAN domain-containing protein	E8ZDN5	Streptococcus_phage	9.2e-32	45.9
WP_003051793.1\|1240273_1241416_+\|integrase	site-specific integrase	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
WP_002983920.1\|1241504_1241780_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.6e-25	73.0
1241503:1241522	attR	NA	NA	NA	NA
WP_002989129.1\|1241878_1242466_-	YpmS family protein	NA	NA	NA	NA
WP_002992620.1\|1242443_1243286_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_002983913.1\|1243278_1244130_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	5.4e-13	35.7

DBSCAN-SWA_7

1416707 : 1493373

Temperate_phage(52.31%)

terminase,integrase,portal,tRNA,tail,capsid

attL 1482074:1482089|attR 1501690:1501705

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011018087.1\|1416707_1417625_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_002983542.1\|1417995_1418529_-	isoprenylcysteine carboxyl methyltransferase family protein	NA	NA	NA	NA
WP_011018088.1\|1418660_1419500_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.5e-50	40.3
WP_002983538.1\|1419621_1420770_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_011018089.1\|1420887_1422519_-	Na/Pi cotransporter family protein	A0A1B1ITU5	uncultured_Mediterranean_phage	2.7e-05	38.8
WP_002994282.1\|1422720_1423443_+	hypothetical protein	NA	NA	NA	NA
WP_011018090.1\|1423571_1424414_-	DegV family protein	A0A1X9I5J4	Streptococcus_phage	3.8e-91	61.5
WP_010922569.1\|1424706_1425264_+	TetR/AcrR family transcriptional regulator	A0A1X9I6A2	Streptococcus_phage	3.2e-14	60.3
WP_011018091.1\|1425299_1426124_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_023079681.1\|1426125_1426743_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_002983521.1\|1426939_1427917_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA
WP_011018094.1\|1428415_1428931_-	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA
WP_011018095.1\|1428945_1429371_-	galactose-6-phosphate isomerase subunit LacA	NA	NA	NA	NA
WP_032465733.1\|1429627_1431079_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_002988834.1\|1431104_1431410_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_011018097.1\|1431402_1431876_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_002983505.1\|1432112_1432883_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	6.4e-21	27.8
WP_002994306.1\|1433086_1433290_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_023079675.1\|1433303_1435535_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	5.4e-113	37.4
WP_011018099.1\|1435534_1435969_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA
WP_002983494.1\|1436140_1437130_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_002988820.1\|1437260_1437611_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_011018100.1\|1437816_1440678_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	2.0e-19	25.2
WP_002983488.1\|1440697_1441000_-	YlxQ-related RNA-binding protein	NA	NA	NA	NA
WP_002983486.1\|1440992_1441289_-	YlxR family protein	NA	NA	NA	NA
WP_002983485.1\|1441304_1442462_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_002983483.1\|1442636_1443173_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_011018101.1\|1443431_1444067_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_002983385.1\|1444066_1444858_-	phosphotransferase family protein	NA	NA	NA	NA
WP_002983381.1\|1444921_1445956_-	ABC transporter permease	NA	NA	NA	NA
WP_002983379.1\|1445958_1446684_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.9e-20	28.0
WP_002983376.1\|1446755_1447175_+	HIT family protein	NA	NA	NA	NA
WP_011018102.1\|1447171_1447528_+	hypothetical protein	NA	NA	NA	NA
WP_002983372.1\|1447638_1448922_-	LCP family protein	NA	NA	NA	NA
WP_002983369.1\|1448930_1449455_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002983367.1\|1449429_1449891_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_011018103.1\|1450044_1451505_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.9e-37	29.3
WP_011018104.1\|1451843_1452026_-	hypothetical protein	A3F673	Streptococcus_phage	1.7e-20	81.7
WP_011018105.1\|1452265_1453264_+	streptodornase A	A7J2B8	Streptococcus_phage	5.3e-84	53.9
WP_003051628.1\|1453404_1453998_-	GNAT family N-acetyltransferase	A0A0A8WFI2	Clostridium_phage	2.4e-23	38.2
WP_011018107.1\|1453997_1454201_-	hypothetical protein	NA	NA	NA	NA
WP_011018108.1\|1454310_1455516_-	glucosaminidase domain-containing protein	A7J2B5	Streptococcus_phage	1.2e-204	83.5
WP_023079604.1\|1455628_1455823_-	hypothetical protein	Q938J5	Temperate_phage	1.4e-20	85.9
WP_011018110.1\|1455819_1456119_-	hypothetical protein	Q938J6	Temperate_phage	1.9e-42	93.8
WP_011018111.1\|1456129_1456747_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	4.5e-78	88.3
WP_011018112.1\|1456749_1457178_-	DUF1617 family protein	Q938J8	Temperate_phage	1.9e-54	78.6
WP_011018113.1\|1457189_1459205_-	gp58-like family protein	Q938J9	Temperate_phage	2.4e-176	73.2
WP_011018114.1\|1459219_1460329_-	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	1.3e-110	65.3
WP_041174241.1\|1460328_1462308_-\|tail	phage tail protein	Q938K1	Temperate_phage	0.0e+00	93.9
WP_011018115.1\|1462315_1462474_-	hypothetical protein	Q938K1	Temperate_phage	1.1e-20	94.1
WP_011018116.1\|1462470_1463187_-\|tail	phage tail family protein	Q938K2	Temperate_phage	5.5e-136	99.2
WP_011018117.1\|1463183_1466444_-	tape measure protein	Q938K3	Temperate_phage	0.0e+00	99.2
WP_011018118.1\|1466433_1467015_-	bacteriophage Gp15 family protein	Q938K4	Temperate_phage	2.9e-98	92.2
WP_011018119.1\|1467018_1467453_-	hypothetical protein	Q938K5	Temperate_phage	1.8e-68	97.2
WP_011018120.1\|1467496_1467958_-	hypothetical protein	Q938K6	Temperate_phage	1.9e-60	78.8
WP_011018121.1\|1467957_1468356_-\|capsid	minor capsid protein	Q79S87	Temperate_phage	1.3e-70	99.2
WP_010922083.1\|1468352_1468709_-\|capsid	minor capsid protein	Q79S88	Temperate_phage	4.5e-62	100.0
WP_010922082.1\|1468708_1469041_-\|capsid	minor capsid protein	Q79S86	Temperate_phage	9.6e-59	100.0
WP_011018123.1\|1469030_1469447_-	hypothetical protein	Q938K7	Temperate_phage	4.3e-56	99.1
WP_010922080.1\|1469500_1470319_-\|capsid	N4-gp56 family major capsid protein	Q79S85	Temperate_phage	4.0e-146	100.0
WP_010922079.1\|1470322_1470937_-	hypothetical protein	Q938K8	Temperate_phage	3.1e-95	95.0
WP_010922078.1\|1471062_1471329_-	hypothetical protein	Q938K9	Temperate_phage	8.3e-37	95.5
WP_010922077.1\|1471415_1471643_-	hypothetical protein	NA	NA	NA	NA
WP_011018124.1\|1471642_1473136_-\|capsid	phage minor capsid protein	Q938L1	Temperate_phage	1.1e-213	80.6
WP_011184804.1\|1473140_1474643_-\|portal	phage portal protein	Q938L2	Temperate_phage	1.4e-274	96.8
WP_011018126.1\|1474656_1475868_-\|terminase	PBSX family phage terminase large subunit	Q938L3	Temperate_phage	5.0e-222	97.9
WP_011018127.1\|1475950_1476424_-	hypothetical protein	Q938L4	Temperate_phage	2.8e-75	98.1
WP_002986841.1\|1476474_1476852_-	ASCH domain-containing protein	Q938L5	Temperate_phage	1.7e-67	100.0
WP_174148345.1\|1476912_1477389_-	GNAT family N-acetyltransferase	B5SP24	Lactococcus_phage	2.5e-36	57.7
WP_011018129.1\|1477304_1477982_-	hypothetical protein	Q938L6	Temperate_phage	4.3e-130	99.6
WP_011018130.1\|1477960_1478479_-	ParB N-terminal domain-containing protein	Q938L7	Temperate_phage	1.3e-86	97.1
WP_002990052.1\|1478942_1479383_-	ArpU family transcriptional regulator	Q938L8	Temperate_phage	4.2e-78	98.6
WP_011018131.1\|1479656_1479923_-	hypothetical protein	NA	NA	NA	NA
WP_011018133.1\|1480411_1481044_-	SAM-dependent DNA methyltransferase	L0P368	Streptococcus_phage	2.3e-85	68.6
WP_011018134.1\|1481045_1481330_-	hypothetical protein	A0A097PAV1	Streptococcus_pyogenes_phage	8.9e-37	87.2
WP_011018135.1\|1481340_1481511_-	hypothetical protein	Q938M0	Temperate_phage	8.5e-11	100.0
WP_011018136.1\|1481507_1481912_-	hypothetical protein	Q938M1	Temperate_phage	9.9e-66	93.3
WP_011018137.1\|1481908_1482193_-	DUF3310 domain-containing protein	A0A1P8VVP5	Streptococcus_phage	2.7e-49	97.9
1482074:1482089	attL	NA	NA	NA	NA
WP_011018138.1\|1482434_1482791_-	hypothetical protein	A0A1P8VVP9	Streptococcus_phage	5.0e-61	100.0
WP_011018139.1\|1482787_1483228_-	RusA family crossover junction endodeoxyribonuclease	A0A097PAS0	Streptococcus_pyogenes_phage	1.6e-80	98.6
WP_032465709.1\|1483227_1483431_-	hypothetical protein	Q938M6	Temperate_phage	1.4e-31	98.5
WP_011018140.1\|1483436_1483856_-	single-stranded DNA-binding protein	Q938M7	Temperate_phage	2.1e-71	99.3
WP_011018141.1\|1483848_1484523_-	ERF family protein	Q938M8	Temperate_phage	9.6e-106	99.6
WP_011018142.1\|1484523_1485006_-	siphovirus Gp157 family protein	Q938M9	Temperate_phage	8.2e-51	100.0
WP_011018143.1\|1485027_1485282_-	hypothetical protein	Q938N0	Temperate_phage	3.7e-42	98.8
WP_011018144.1\|1485262_1485619_-	HTH domain-containing protein	A0A097PAU3	Streptococcus_pyogenes_phage	2.0e-49	98.3
WP_011018145.1\|1485629_1485767_-	hypothetical protein	J7KBQ4	Streptococcus_phage	2.7e-07	78.4
WP_011018146.1\|1485766_1486609_-	ATP-binding protein	A0A1S5S7L9	Streptococcus_phage	1.3e-48	40.7
WP_011018147.1\|1486618_1487557_-	phage replisome organizer N-terminal domain-containing protein	J7KBV5	Streptococcus_phage	1.4e-115	84.9
WP_021340237.1\|1488065_1488317_-	DNA-binding protein	A0A1P8VVV6	Streptococcus_phage	4.4e-40	96.4
WP_011018149.1\|1488726_1489446_-	phage antirepressor KilAC domain-containing protein	A0A141E1D3	Streptococcus_phage	2.8e-87	69.2
WP_014635614.1\|1489473_1489686_-	DNA-binding protein	J7KBP9	Streptococcus_phage	9.2e-31	95.7
WP_011888679.1\|1489881_1490223_+	helix-turn-helix transcriptional regulator	J7KJZ4	Streptococcus_phage	1.2e-48	85.8
WP_032463929.1\|1490206_1490593_+	ImmA/IrrE family metallo-endopeptidase	A0A1P8VVK5	Streptococcus_phage	8.3e-54	77.6
WP_011018151.1\|1490607_1492029_+	DUF4041 domain-containing protein	M1PLF9	Streptococcus_phage	7.4e-140	74.5
WP_011018152.1\|1492206_1493373_+\|integrase	tyrosine-type recombinase/integrase	C5J953	Streptococcus_phage	2.4e-80	42.4
1501690:1501705	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NC_003485.1|WP_003051628.1|1453404_1453998_-|GNAT-family-N-acetyltransferase

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_003485.1|WP_003051628.1|1453404_1453998_-|GNAT-family-N-acetyltransferase

1453404_1453998_-

197 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|89	0.46875	0.9695431472081218	0.9792746113989638

1416707-1493373

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_003485

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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