Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
---|---|---|---|---|---|---|---|
NC_003454 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 chromosome, complete genome | 7 crisprs | WYL,RT,csa3,DEDDh,cas4,DinG,cas2,cas1,cas3,cas5,cas7,cas8b2,cas6,PD-DExK | 0 | 10 | 2 | 0 |
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NC_003454_1 | 3935-4204 | Orphan |
NA
Consensus repeat of NC_003454_1
|
6 spacers
spacers of NC_003454_1
>1.1|3953|24|NC_003454|CRT ATGATAATAAAGCCATTGAAAAGG >1.2|3995|24|NC_003454|CRT CTGGGAATAGAGCTACTGGTGAGT >1.3|4037|24|NC_003454|CRT TTCATAATATAGCCAGTAAAATAC >1.4|4079|24|NC_003454|CRT GCAATAATGCAGCTGATGGGGTAA >1.5|4121|24|NC_003454|CRT TTAAAAATACAGTTAGTGGATTTA >1.6|4163|24|NC_003454|CRT GTCAATATCAAGTTACTGGAAACT |
CRISPR arrays and Neighbor proteins around NC_003454_1
The CRISPR arrays of NC_003454_1 >merge|NC_003454|1|3935-4204|CRT AAAGTTCAGCTTTTGGATATGATAATAAAGCCATTGAAAAGGAAAGTTCAGCTTTTGGAACTGGGAATAGAGCTACTGGTGAGTTTAGTTCAGCTTTTGGATTTCATAATATAGCCAGTAAAATACATAGCTCAGCTTTTGGAAGCAATAATGCAGCTGATGGGGTAAATAGTTCAGCTTTTGGATTTAAAAATACAGTTAGTGGATTTAATAGTTCAGCTTTTGGAAGTCAATATCAAGTTACTGGAAACTTTTCTGGTGCTTTTGGAA >NC_003454|1|1|3935-4204|CRT AAAGTTCAGCTTTTGGAT ATGATAATAAAGCCATTGAAAAGG AAAGTTCAGCTTTTGGAA CTGGGAATAGAGCTACTGGTGAGT TTAGTTCAGCTTTTGGAT TTCATAATATAGCCAGTAAAATAC ATAGCTCAGCTTTTGGAA GCAATAATGCAGCTGATGGGGTAA ATAGTTCAGCTTTTGGAT TTAAAAATACAGTTAGTGGATTTA ATAGTTCAGCTTTTGGAA GTCAATATCAAGTTACTGGAAACT TTTCTGGTGCTTTTGGAA
>NC_003454.1|NP_602325.1|2702_3602_+|hypothetical-protein MDNHIKGALLVCLAATMWGFDGIALTPRLFSLHVPFVVFILHLLPLILMSILFGKEEFKNIKKLQKNDLFFFFCVALFGGCLGTLCIVKALFLVNFKHLTVVTLLQKLQPIFAIILARLLLKEKLKRAYLFWGFLALLGGYLLTFEFHLPEFVSGDNLLPASLYSLLAAFSFGSATVFGKRILKSASFRTALYLRYLMTSCIMFVIVAFTSGFGDFLVATAENWLIFIIIALTTGSGAILLYYFGLRYITAKVATMCELCFPISSVVFDYLINGNVLSPVQIASAILMIISIIKISKLN >NC_003454.1|NP_602324.1|1103_2228_-|multidrug-resistance-protein-2 MAILYDSVITAFLLQLGLKNTQIGLLWSVVLLTQMLFDYPTGSFADRYGRLKIFTIGMVLTGSAIVMIAYSVSISMLYISAILMGIGESQISGTLFPWFVNSLDKVDNLQEKEEYILKSNGQVQYSTNIIGILTGFVISFLNLDYKFILILAGTFQAINGIFIYFSFQDNKSTETNLIKIGKKSFQIFLKDYKLWIYTLTMTIHYSFYSVHLFIWQPRANLLGVIGSKLTGINSVYLSCLVISGLIIKYKKEIKNYLYVLYVILIPISLIIIYQSQNLILYILGTILLGISNGMVAPQIMSTVHYFIPDEVRSSVISLLSSLSSIFLIFLQVIIGKILDIKGNYYLEILCVLFGIIYIVCIILILKWLKENRNR >NC_003454.1|NP_602323.1|76_709_-|spore-coat-protein-regulator-protein-YlbO MELKIQKVRNEKIYEENERLLKLLEMKENNIYKGDLKFARVSFSDINNLNNKIFIDLGTEDNIKIDMITVYGDYLVGKIVAVHDNYSEVELITNPNCIISAKTMGDVLGIARGSDEEDGLLYFQPSIVEDNLKEGDEIITSGISDIYPEGIKIGKIEQIDEKENYGYKRVTLKPGFESKDLRELIVISRENAVNRPIVKEEVKELKGDEK >NC_003454.1|NP_602327.1|5282_6017_-|nickel-transport-ATP-binding-protein-NikE MKAVELINITKKYEEQEVLNSFSLDIEKGKCLAIMGESGSGKSTIAKIIIGLEKQNLGTVKIFGKERDIKTTFKDIEFLFQDSYNALNPSMIVEDLIYEPLQFLVNTTDKSQKKEIVLELLEQVELSSELLTRKRDELSGGQLQRVCLARALSTKPQIMIFDESLSGLDPLVQDKILDLLYKIQKQYQLTYIFISHDFRLCYFLADRIILIDSGNITEDFKELDKEIIPKTEIGKILLKDISKL >NC_003454.1|NP_602328.1|6017_6800_-|nickel-transport-ATP-binding-protein-NikD MNILEIKNLSLKISDEKILKNINFELKEKEIISIIGKSGSGKTMLSKMIMGLKNKNMQIEGEILFKDNNIFNFSEEDLRKYRGEGIGYITQNPLNVFLPFQKIKTTFLETYFSHKNISKSEVIELAKKNLKQVNLENAEEILNKYPFELSGGMLQRVMVAIIIGLDAKIIIADEVTSALDSYNRYEMIKIFKELNKMGKSIVLITHDYYLMKSISDRCLVMENGEVIEKFNPKLKPELIKEKSEFGAKLLETTIYKRKGS >NC_003454.1|NP_602329.1|6796_7612_-|nickel-transport-system-permease-NikC MEKTMAKNIKFYFAIFLLFFWIVLAIVAPMVAPYDPQYVDLSLKLLSPNNTYLLGTDALGRDILSRIIYGARLSISISLSIQIILLLISVPIGLFIGWRQGKEESFFDWLTMIFSTFPSFLLAMVLVGMLGAGISNMIISVVAVEWIYYARILKNSVISQKQNEYVKYAILKGMPAGYILKKHIFPFVYGPILTASLMNIGNIILMISSFSFLGIGVQPNISEWGNMIHDSRTFFRNHPNLMLYPGIMILLAVGSFRFIASQIEEKFRGIK >NC_003454.1|NP_602330.1|7592_8531_-|nickel-transport-system-permease-NikB MRNMKKKIFDIISALLVISILAFIFIQLSPGDPAENYLRASHLPITDELLKQKREELGLNSPLIIQYLKWLKNVLLGNFGYSFLRKEPAIYLTFKSLYATFQLTIFSTFLIILISLPIGILSAIKTGTWIDKIVISITTIFVSMPVFWLGFSLILLFSVKLNWLPVSGRGGFLNFILPSITLSVPFIGQYIEFIKKSILENIQNNLLENAVLRGLKKRYIIFNYLLKGAWIPILSGFSFTFVSILTGSILVEEIFSWPGIGFLFTKAIQAGDVPLIQACIMVFGMLFIIATHFMNGILKYLDPRIKGGKNNG >NC_003454.1|NP_602331.1|8536_10105_-|nickel-binding-protein MSLLFLVACGEKGKEETKSEDTQKKTLTISWNQDVGFLNPHAYLPDQFITQGMVYEGLVNYGENGEILPSLAESWEISEDGKTYTFHLRKGVKFSDGSDFNANNVKKNFDSIFLNKERHSWFGLTGHISSYRVVNENTFEFVLDEAYTPTLYDLAMIRPIRFLADAGFPDDGDTYKGIKASIGTGPWILKEHKKDEYAIFEKNPNYWGKKPILDEVVIKIIPDAETRALQFEAGELDMIYGNGLISYDTFKSYQGDSKYKTDISEPMSTRLLMFNTTTGPLGDINLRYALTYATDKKAISEGILNGIEKPADTIFAPNMPHSKQDLKPFEYNLDKAKEYIEKAGYKMGKEFYEKDGKVLTLVFPYIATKTLDKQIAEYIQGQWKKIGVNVEIKALEEKNFWEETDDLKYNVMLNYSWGAPWDPHAYINAMATVAENGNPDYEAQLGLPMKKELDAKIHQVLLEANPEKVEQLYKEILTTLHEQAVYVPLTYQSLIAVYRDNLTGVRFMPQEYELPLSYIDKK >NC_003454.1|NP_602332.1|10535_11009_+|6,7-dimethyl-8-ribityllumazine-synthase MEEKMKVFEGKFNGKGTKIAIVAARFNEFITSKLIGGAEDILKRHEVQDDDINLFWVPGAFEIPLIAKKLAQSKKYDAVITLGAVIKGSTPHFDYVCAEVSKGVAHVSLESEVPVIFGVLTTNSIEEAIERAGTKAGNKGADAAMTAIEMINLIKGI >NC_003454.1|NP_602333.1|11010_12120_+|5-amino-6-(5-phosphoribosylamino)uracil-reductase MDKNSDEKYMARAIELAKRGTGGVNPNPLVGAVIVKDGKIIGEGWHKKFGGPHAEVWALNEAGENAKGATVYVTLEPCSHQGKTPPCAKRIIEAGIKRCVVACIDPNPLVAGKGMKIIENAGIEVELGVLEKEAKEINKIFFKYIENKIPYLFLKCGITLDGKIATRNGKSKWITNEIAREKVQFLRTKFMAIMVGINTVLKDNPSLDSRLDEKKFGIEKRNPFRVVIDPNLESPIEGKFLNFNDGKAIIVTSNDNKGLEKLEKYKNLGTIFIFLEGKIFKIQDILKELGKLGIDSVLLEGGSGLISTAFKENIVDAGEIFIAPKIIGDSSAIPFINGFNFDSMEDVFKLPNPKFNIYGDNISIEFENL >NC_003454.1|NP_602334.2|12311_12968_+|riboflavin-synthase-subunit-alpha MFTGLVEEKGSVISLNNGDKSIKLKIKANKVLENVKLGDSIATNGVCLTVTEFSKDYFVADCMFETISRSNLKRLKAGDEVNLEKSITLATPLGGHLVTGDVDCEGEIVSITQEGVAKIYEIKISRKYMRYIVEKGRATIDGASLTVISLTDDTFSVSLIPHTQEKIILGSKKVGDIVNIETDLVGKYIEKFVYFDKLEQKENKKSKITREFLLENGF >NC_003454.1|NP_602335.1|12977_14177_+|3,4-dihydroxy-2-butanone-4-phosphate-synthase MIYKIEDVLEDIKNGIPLIIVDDENRENEGDLFVAAEKATYESINLMATFARGLTCTPMTSEYAIRLGLDPMTARNTDAKCTAFTVSVDAKEGTTTGISIADRLTTIKKLANKNSVPSDFTKPGHIFPLIAKDKGVLEREGHTEATVDLCKICGLTPVSVICEILKDDGTMARMDDLEIFAKEHNLKIITIADLIKYRKKTEQLMKIDVVANMPTDSGTFKIVGFDNLIDGKEHIALVKGDVAGKENVTVRIHSECFTGDILGSLRCDCGSQLKTAMRRIDKLGEGIILYLRQEGRGIGLLNKLRAYNLQEEGMDTLDANLHLGFGADMRDYAVAAQMLKALGVKSIKLLTNNPLKINGLEEYGIPVVKREEIEIEANKINKVYLKTKKERMGHLLKIK >NC_003454.1|NP_602336.1|14188_14266_-|hypothetical-protein MFFSVIFLFGLNYLICNSPLFNILR |
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CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NC_003454_2 | 461346-461537 | Orphan |
NA
Consensus repeat of NC_003454_2
|
2 spacers
spacers of NC_003454_2
>2.1|461373|52|NC_003454|PILER-CR ATGACGCAAATGGGGTGACCGACGAGGCTCGAACTCGCGACAACCAGTGCCA >2.2|461452|59|NC_003454|PILER-CR CGGTCACCATATTATTCTGGAGCGGGAAACGAGGTTCGAACTCGCGACATTCAGCTTGG |
CRISPR arrays and Neighbor proteins around NC_003454_2
The CRISPR arrays of NC_003454_2 >merge|NC_003454|2|461346-461537|PILER-CR AAGTCGTGTGCTCTACCAACTGAGCTAATGACGCAAATGGGGTGACCGACGAGGCTCGAACTCGCGACAACCAGTGCCACAAACTGGCGCTCTACCAACTGAACTACGGTCACCATATTATTCTGGAGCGGGAAACGAGGTTCGAACTCGCGACATTCAGCTTGGAAGGCTGACGCTCTACCAACTGAGCTA >NC_003454|2|1|461346-461537|PILER-CR AAGTCGTGTGCTCTACCAACTGAGCTA ATGACGCAAATGGGGTGACCGACGAGGCTCGAACTCGCGACAACCAGTGCCA CAAACTGGCGCTCTACCAACTGAACTA CGGTCACCATATTATTCTGGAGCGGGAAACGAGGTTCGAACTCGCGACATTCAGCTTGG AAGGCTGACGCTCTACCAACTGAGCTA
>NC_003454.1|NP_602754.1|460668_460917_-|hypothetical-protein MNKFSIHGTEEGNTTSIKLDEIAILADPETLLKIGEFIIKTAHVMKGYEVDYSQLQDEISDFDNKNNTDIIIYNQDYDYKCD >NC_003454.1|NP_602753.1|460246_460621_-|hypothetical-protein MLEILNKSLNGILLGTKRNEIGEKILNDPNYFLEFDRKNKIESEASLITISVLDRKEFSLNGKIINFRNFSKFIKYEKNIVEEEDNAYSYIFPEHNLTLYVDYINQNFMQILIYDDSLKDLYER >NC_003454.1|NP_602751.1|459866_460082_-|glycerophosphoryl-diester-phosphodiesterase MTKNFAHRGFSGKYPENTMLVFQKAIEVGAELKKNNIEINTWTVNRKDNINDLIDKKVDILIGNYPDLVKK >NC_003454.1|NP_602750.1|459286_459589_-|Na(+)-linked-D-alanine-glycine-permease MVVVLGGLKKLANISTLLVPIMSIFYVVVGLLVILLNIQQVPSVIKEIFTQAFSMKAVAGGTGGYIIARAMQYGIIMVCIQMKLEKEQQHLYFYFSVSQL >NC_003454.1|NP_602749.1|459032_459140_-|Na(+)-linked-D-alanine-glycine-permease MGLVIIPNLIALIILFSQVRQQTKDYFSNPKLSSR >NC_003454.1|NP_602748.1|458489_459017_-|chromosome-architecture/replication-ATPase MYKNIIKLISGDITKIPEVEAIVNAANSSLEMGGGVCGAIFKAAGSELAQECKEIGGCNTGEAVITKGYNLPNKYIIHTVGPRYSTGENREAERLASAYYESLKLANEKGIRRIAFPSISTGIYRFPVDEGAKIALTTAIKFLDKNPSSFDLILWVLDEKTYIVYKEKYKKLLEI >NC_003454.1|NP_602747.1|455152_457945_-|serine-protease MDETKVREFIFNEQNNSIENIPMDNRVLNGDKVKVGVLDGDFINKKNYLENKYGNIEILERNYNPKHSNHGELVLKVLREKNKLGIIAGSIGENDDFSGKEGTTVIPKLETYEKVLEKFNPNQKVKVFSQSWGVPETIGSYISKSEEERMRAIAPGQTSSEGRKILDFYKKEVNKDTLFIWANGNTLVNNQNQVVLFNDAYYQGGLPHLYSELEKGWITVVGVKKKDGNMLNKHYTDTAHLAYPGNAKWWAISADAEVVDSKGVTHRGSSFAAPRVAKVAALVAEKYDWMTADQVRQTLFTTTDRTNIDENETYIRNIVTEPDEKYGWGMLNRERALKGPGAFINIRRQYQYSPSSNNIFKADITENKVSYFENDIFGDGGLEKLGKGTLHLTGNNSYERGSIVKEGTLEIHKIHANQINVENKGTLVLHSKAIIGYKVNSNSVIDEKEITASNITAKNLDNKGIVKVTGTTAVIGGDYIAHSGSTTEMDFSSKVRVLGKIDMQGGAITLSSNRYTTLRETATIMEASNVQGNIANVETNGMRTANVEVQDGKVVATLSRQNPVEYIGENTEASTKNVAENVENVFQDLDKKVMSGTATKEELAMGATVQNMTTMGFTSATEMMSGEIYASAQALTFSQAQNINRDLSNRLAGLDNFKNSNKDSEVWFSAIGSGGKLKRDGYASADTRVTGGQFGIDTKYKGTTTLGVAMNYSYAKANFNRYAGESKSDMVGVSFYAKQDLPYGFYTAGRLGLSNISSKVERELLTSTGETVTGKIKHHDKMLSAYVEIGKKFGWFTPFIGYSQDYLRRGSFNESEASWGVKADRKNYRATNFLVGARAEYVGDKYKLQAYVTQAINTDKRDLSYEGRFTGSAARQKFYGVKQSKNTTWIGFGAFREISPVFGVYGNVDFRVEDKKWADSVISTGLQYRF >NC_003454.1|NP_602746.1|453623_455012_-|Xaa-Pro-dipeptidase MLSKEVYVNRRKKLKENFKDGLILIMGNNFSPLDCEDNTYPFIQDATFRYYFGIEHNGLIGIIDINENEEIIFGNDYTMSDIIWMGKQKFLKELAVEVGIEKFLEKEELKKYLENRKNIRFTNQYRADNIMYLSSILNINPFEFDKNISFDLVKAIIKQRNIKDKIEIEEIEKAVNITKEMHLSAMRNIKAGMKEYELVAEVEKQPRKYNAYYSFQTILSKNGQILHNHKHLNTLKDEELVLLDCGALSEGGYCGDMTTTFPVSGKFTERQKTIHNIVRDMFDRAKDLARVGITYKEVHLEACKILAANMKKLGLMKGEVEDIVSSGAHALFMPHGLGHMMGMTVHDMENFGEINVGYDEGEKKSTQFGLSSLRLAKKLEIGNVFTIEPGIYFIPELFEKWKNEKLHEEFLNYDEIEKYIDLGGIRMERDILIQEDGTSRILGDKFPRTADEIEEYMKEYRK >NC_003454.1|NP_602745.1|453254_453614_-|hypothetical-protein MESAQQLLLKKLSNESSINEIQSYIKEIMKMRGFNKEKSSDKILLLVEEVGELAKAIRKNERKLGIDKTKEYNYSSIESEIADVFIVLLSICDILNIDLFKAFLDKEEENIKRTWSINK >NC_003454.1|NP_602744.1|446706_448086_+|sodium-dependent-tryptophan-transporter MCNSYFRLKILKEEFMSAIEKRDGFTTKWGFILACIGSAVGMGNIWRFPVLVSELGGMTFLIPYFIFVILIGSTGVIEEFALGRAAGAGPVGAFGMCTEMRGNRSIGEKIGIIPILGSLSLAIGYSCVMGWVFKYAWMSINGSMYAMQSNMEVIGSTFGQTASAWGANFWIIIALIASFIIMSMGVSGGIEKANKIMMPILFVLFVLLGIYIVFQPGSSNGYKYIFTVNFEGLLNPKIWIFAFGQAFFSLSVAGHGSVIYGSYLSKSEDISNSARNVALFDTLAALLAAFVIIPAMAVGGAELSSGGPGLMFIYLVNIMNNMAGGRIIEVIFYLCILFAGVSSIINLYEAPVAFLQEKFKANRVTATAIIHIIGCIVAICIQGIVSQWMDVVSIYICPLGALLAAIMFFWVAGKEFAEEAVNMGATKKIGSWFYPAGKYIYCLLALVALIAGALLGGIG >NC_003454.1|NP_602755.1|461735_463865_-|O-linked-GlcNAc-transferase MLIANKLNPEDDFTCTLLIETYISLSRVEDENGNHDKAIEYALEAKKYVRDEEGENNADSFLAWLYDRYGNYTEAEVLLKNIINKSKNDEWLYSELGYCLAEQGKQEEALESYFKAIELNRNDAWIFTRIGMCYKNMDRKEEAIEYYLKALEQKEDDIFIMSDIAWLYDSLGEFEKALKYLERLEELGQNDAWTSTEYGYCLAKLKRFDEAIVKINRALEAEDEDKDTAYIYSQLGWCQRHLEKYDEAIETFLKAKKWARNDAWINIELGHCYKAKNEKEKALEFYLKAEKFDKNDISLLSDIAWHYDALDRNEEALKYIKRVVRLGRDDAWINEEYGACLSGLGKYKEAIKKYEYALSLDEEGKDERYINSQLGWCYRQLEEYKKAIKFHKKAKELGRNDIWINMEIGMCYAKLEEYEKAAENYLIAYEMDRDDIFTLTELGWVNNAMEKYDDAIEFLLKAEKLGRNDEWINTEIGLNLGRSGKTQEGIERLEKSLTMVEDDDIEQKIFINSEIGWLYGRLEEPNVEEALRYLTVAKELGRDDEWLNSELGFELGYNPDTREEALKYFERAIELGRNDAWVWEMRGTLLFDLRKYEEALDSFRKAYALNDDGWYLYSIGRCLRRLERYEEALENLLNSRQISLNEDDVVDGEDLELAFCYIGMGDKEKAKEYLKSAKDSIEKQGTLNDYIKEEIDEIEKGILSLARLS >NC_003454.1|NP_602756.1|464149_465187_-|hypothetical-protein MDEKFWEKINTFGENGEFDKIVKEIKKLPEDKLDIEIINVLGRAYMNLGDYENALDTYLSYIGKAKEDVTNVDIWLYSECGWLCNEVGDYEQGLKYLLEAEKLGRDDEWLNTEMGQCLGRLERAEEGLERLKKSLKLIETEAPENINEKIFINSEIGYLYGFLENSEEALKYFHIAKDLGRKDDWIYMHLWFNLERSKGKEEALKYFENEAKTDDKNAIVWASLGQIYMNFFRNYEEAEKVFKKAFGLSGDGLYLYNRGMVLRILGRYKEAVEVLLQSRKISVQEGDVTDGEDLDLVRCYIALKDKENAKKYLEFAKEGMENIPEEHVDEFEDALKELEDLIAKI >NC_003454.1|NP_602757.1|465254_465467_-|hypothetical-protein MNRDAKFINFSEEHELDYILKKYGKETNKENRDLLKEFGKKAKEFLGKTMLEHDEFYKYLADNSLVSKLK >NC_003454.1|NP_602758.1|465542_466493_-|hypothetical-protein MYKLLNIADFYSNEELEKDMQYFSEKYGFDGFELIKFFDGDNSPLKKYIKGYHMRFFPSWMELYLEDFNSLYDELKDEKYFKSLCGGYSKKELIEYYKRELKIAKELEVEYMVFHACNVKVTEAMTYDFKYSDRKVLNAVISIINEIFEDGEYGFKLLFENLWWSGLRLTNKEEIEYLLNGVKYKNVGFILDTGHMINNNRDIKNSKEGIEYIKKNIKNIGEYKNLIYGIHLNYSLSGEYVNRAIKENKEKNLNIEEIMNNVYQHVGSIDYHDPFENEEIIDIISSLPIKYLVFELIGNTREELEDKIQRQWKIFN >NC_003454.1|NP_602759.1|466505_467279_-|hemin-transport-system-ATP-binding-protein-hmuV MKNILEVKNISYSVGENKILKDISFKCQSGEIIGIIGPNGSGKTTLLKTINGINPISSGDILLNDKSTKEYTEKELARDISFMNQNTNIEFDFPCIDIVVLGRYPYLERFQEYSKKDMELAEKYMELTDTLKFKDKSILQLSGGERQRVLFAKILTQESQVILLDEPTASLDMRHEEDLLKEVSKEKDKDKIIILVIHNLRTAIKYCSRLILLSNGNIIKDGTVEEVITEENLNNIFGIKTKVYYNEISKSLDFCII >NC_003454.1|NP_602760.1|467275_468301_-|hemin-transport-system-permease-HmuU MKYRINFNLFLFFLLIGIIIFSLFYGAVRVPISDVIKIILNKTGLFNFEISKQSYIPIVFFVRFPRIMVAVIVGGALALCGCTMQSLLKNPIVDSGIIGISSGASLGAVIAVSLGLTATNIFAMPIFSGTFALIISAIIYKISTLRGKTDNLLLILSGIAIGSFVGAITSVILTSLAETEMKEYIFWAMGSLNGRRWEHFFFGLIPITILSPILFYYGKELNILLLGEEEAKSLGINIKKIRGKILIIIALLTAISVCISGNITFVGLIVPHILRKIIGSDNRKLLKSSFLAGACFLTFGDLLSRVVLAPKEISVGIVTALIGAPYFIYLIVKIRREGKTL >NC_003454.1|NP_602761.1|468303_469146_-|hemin-binding-protein-HmuT MLFSFTIVNAKGVQTKKYNHIVSLTLSGDEMLLGLVPENRIAGLSGKINEDKEISNIVDKAKKFPKVEGNEEVLMSLEPDLIIVADWLSKRITDIGAITGAKVYFYKTPNSYEEQKKLIRDLANLVEEKENGEKLIKNMDDRLKALQNKIAKNYKGAKPRILMYTSFSTTSGKNTTFNDMVKLINGVNVVAEAGIDGFKDISKEKVIELNPDIIIVPIAKKYDNVNKISKLFFEDPSFKNVKAIKNKKVYFIQYKDITPTSQYMINSIEELAKVVYQFKE >NC_003454.1|NP_602762.1|469222_471196_-|hemin-receptor MKKKFMLLALIVLGGMCAFAEESPVLELKQTVVTSDSFGTPVRETAKNMTVINAKEIKEKGAKTIADALRGVPGVVVRQMDGASPMVDLRGSGATSQFNTVILLDGIPVSGLAGFNLNTVPVDEIEKIEVLQGAGAVMYGDGAIGGVVNIITKAPTKKAVYGGAGLEVGSWRTIRENVYLGGKIGDKFLLNASYSGNSSKDYRDRSPQYENKKDKRDSLWLRGKYLLDNGSIAINYNHSEDKDYYTGSLSKEQFDKNPRQVGSWSGYTYGINDIINAKYNQKINDKIDIFLTSGYYHNKNKFQKNSTSEYFIRPEVKLTYAKDSYVTLGLDYRDGKRDFKDDVFVNGVSQKAPDDKRESFAGYVMNKTTFDNWQFTQGYRREKVKYEYSSKVYDPMTWQLKEIKPKSADYSNNDSFEFGVNYLYSDTGNVFFNYARALRTPTIQDAGAWYGPVKTQKNDIFEIGLRDAYKNTSISTSIFYVNSKNEIYYDKTNSFNENNKNFDGKVRRIGAQLSLAHYFDKLTLRERVSYIVPKVTSGIYDGKEFAGVSRWTANVGATYNITKGLTANVDGYYQSDAYAEDDFDNYFSKGNNYVTVDASLSYAFENGIELYTGVSNLFDKKYANAVTSTRSTFGAGPRKVYYPANGRSVYAGIKYTF >NC_003454.1|NP_602763.1|471792_472161_-|hypothetical-protein MKFKNFIKIIILCVSIGVTAFSAEHKTLGTEIKEYGKVYNKDGVLVVHKKMKKGEKIPPHTHQYKELFFTVVSGKMEVHLNDKETYIAEPKKALNFAGDVNISATALEDSDIFIYLVGENKK >NC_003454.1|NP_602764.1|472319_472706_-|translation-initiation-inhibitor MFKMKKVINTKNAPAALGPYSQAIEANGVLYVSGQIPFVPATMTLVSEDVEEQTKQSLENIGAILKEAGYDFKDVVSATVYIKDMNDFTKINGVYDKYLGEVKPARACVEVARLPKDVKVEIGVIAVK |
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CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NC_003454_3 | 625343-625440 | Orphan |
NA
Consensus repeat of NC_003454_3
|
1 spacers
spacers of NC_003454_3
>3.1|625368|47|NC_003454|CRISPRCasFinder GTGACACCTTTTCCATCTAATACACCATTTTTAACTCCCATTAGTCC |
CRISPR arrays and Neighbor proteins around NC_003454_3
The CRISPR arrays of NC_003454_3 >merge|NC_003454|3|625343-625440|CRISPRCasFinder TTGTATTTTACCACTTGGATAGTAAGTGACACCTTTTCCATCTAATACACCATTTTTAACTCCCATTAGTCCTTGTATTTTCCCATTTTCATATTTAA >NC_003454|3|1|625343-625440|CRISPRCasFinder TTGTATTTTACCACTTGGATAGTAA GTGACACCTTTTCCATCTAATACACCATTTTTAACTCCCATTAGTCC TTGTATTTTCCCATTTTCATATTTAA
>NC_003454.1|NP_602900.1|624477_624933_-|hypothetical-protein MLGLIFSSCQLFTEAIKDNIHRYEIEETFKEYKKKDGSMAYQGNKEVFNIVKEVLKRPINKETQFDGIKIMIPENTRINSKIGTIIDIKTGYGLPISIYIKDYCDSSDDRVASKKRSAGGYYHINYLSQNKDTKLLFEKISKVNGFTKGCK >NC_003454.1|NP_602899.1|624099_624297_-|hypothetical-protein MIILIIMGLIFSSCQLFTEAIKDNMYRVERARERKELSKKDGPGAIVVDEYKEGVEAAIKDQKDQ >NC_003454.1|NP_602898.1|623827_624022_-|hypothetical-protein MDEKTGYGIHLLILRETDGCSNVYYYKKIREGLYYKLLYDKRDLEISKISEKIVKKNGFTKNYK >NC_003454.1|NP_602897.1|623258_623753_-|hypothetical-protein MTFIFLTACTNTEYTYSPKNYKNSDISILASLIESDNESSPLSYIWIYDLRNHYRNRERESYHNVKILSSKIKITNNGKEYIIRTEPNSDHIYVYKQGVIITGDFTAYIGQIQLDNGKIIDIPPLKFEKNIKIEKYSGLDDAFSKGVPRKEIFSGTVEDYKKQK >NC_003454.1|NP_602896.1|622523_623183_-|hypothetical-protein MKKLILGLFLVGSALSFSAERTLSYEETFLDKKNGKVYAIGEETPYTGIVENYKFLSGDRVLEGRIIFKNGLMEGTFKLLYPSGKTASIATYKNGETDGIQKEYYENGQIKMEVLHKNGKAEGYLRTYYLNGKLEGEEKYQNGLREGLTKSYYEDGSLEGERFYKNNNLEGINKIYHPNGKIQMEANFKDNKLEGIVKRYDENGKITSEEFYKNGNRIK >NC_003454.1|NP_602895.1|621997_622420_-|hypothetical-protein MVDDTTGITYVQGEKTPFTGTVEVKYDNGKVQALMEVKDGFLEGKTETYYPSGKIQSKENYKKGYEDGLNVLYYESGQIEYEKNTTNEGKTVHTKHYYPSGKIDFESTYKNGKLNGEVKKYDENGQLIQQGIFKDGVQVK >NC_003454.1|NP_602894.1|620987_621977_+|UDP-glucose-4-epimerase MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDSLITGHIDAVDEKAHLELGDLKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNNNVDKIVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRLRNGGDSQIFNLGNGEGFSVKEVIEVTRKVTGYPIPAEVSPRRAGDPARLIASSKKAIDELKWKPKYDKLEQIIETAWNWHKNHPNGYED >NC_003454.1|NP_602893.1|619458_620988_+|galactose-1-phosphate-uridylyltransferase MEICSLINRLIKYALKNSLITEDDVMFVRNELMALLHLKDWQDVKENCQIPEYPQEILDKICDYAVEQKIIEDGVTDRDIFDTEIMGKFTAFPREIIETFKELSQQNIKLATDFFYNFSKKTNYIRTERIEKNLYWKSLTEYGDLEITINLSKPEKDPKEIERQKNMPQVNYPKCLLCYENVGFAGTLTHPARQNHRVIPLTLDNERWYFQYSPYVYYNEHAIIFCSEHREMKINRDTFSRTLDFINQFPHYFIGSNADLPIVGGSILSHDHYQGGNHEFPMAKSEIEKEVIFDKYPNIKAGIVKWPMSVLRLKSLNRKDLVDLADKTLKAWREYSDEEVGVFAYTNSTPHNTITPIARKRGDYFEIDLVLRNNRTDEANPLGIFHPHSEHHNIKKENIGLIEVMGLAVLPGRLKFEMRKIAEYLKDEDFEKKISDDKDTAKHLTWLKAFINKYSNLKTLSVDEILENILNVEIGLTFSRVLEDAGVFKRDEKGKNAFLKFINHIGGRF >NC_003454.1|NP_602892.1|618289_619459_+|galactokinase MLENLIKDFKEIFKYSGEVERFFSPGRVNLIGEHTDYNGGFVFPCALDFGTYAVVKKREDKTFKMYSKNFENLGIIEFNLDNLIYDKKDDWANYPKGVIKTFLDRNYKIDSGFDVLFFGNIPNGAGLSSSASIEVLTAVILKDLFKLDVDIIEMVKMCQVAENKFIGVNSGIMDQFAVGMGKKDNAILLDCNTLKYEYVPVKLVNMSIVIANTNKKRGLADSKYNERRTSCEEAVKVLNNNEVNIKYLGELTVTEFEKVKHYITDEEQLKRATHAVTENERAKIAVEFLKKDDIAEFGKLMNKSHTSLRDDYEVTGLELDSLVEAAWEEKGTVGSRMTGAGFGGCTVSIVENDYVDSFIKNVGKKYKEKTGLEASFYIANIGDGAGKVK >NC_003454.1|NP_602891.1|616597_618154_+|transporter MRLLQKICNSLLEMSTNKKKKRGFPSAFTVLAIILVLAAALTYIVPSGQFSRLTYDDSTNEFVITDHDNNVTTEPATQEVLDRLQIQLSLDKFTEGVIKKPIAIPGTYQRIEQRPQGFLDIIKAPVTGSMDTVDIMLFVLVLGGIIGIINKIGAFDAGMAALSKRTKGKEFLLVTLVFLLTTLGGTTFGLAEETIAFYPILMPIFLLSGFDVLTCIAAIYMGSSIGTMFSTVNPFATVIASNAAGISFTEGLTFRIVALVLASVITLVYMYWYAQKVKKDKTKSYVYVDEEEIHKRFLGEYDSNSEKEFTWRRKLCLLIFALAFPVLIWGVSLGGWWFEEMTALFLGVAIVIMFLSGLSEKEAINTFISGSADLVGVVLTVGLARSINIVMDNGFISDTLLYYSTEFIAGMSKGVFAVAQLIIFSFLGFFIPSSSGLAVLSMPIMAPLADTVGLSREVVINAYNWGQGWMSFITPTGLILVTLEMAGTTFDKWLKYILPLMGIMGVFSALMLIINTML >NC_003454.1|NP_602902.1|625614_626349_-|hypothetical-protein MKKKLLAIFLLVSSLIFSEERILLFEEIFLDEKTEMVYAIGEETPYTGVVEDYKFLIKDRVLEGRVIFKNGLMEGTFKLLYPSGKIARIMTYKNGKREGIQKVYYESGIIERETSYKNGLIDGLMKNYYPNGNIRSEMLLKKEVLDGITRTYYKNGKLKVEVSYQNGVKVGVQKGYYQNGKLKIEHPIDKNGLTTGTVKVYYPSGKIMAEESYKNDKLDGIVKIYDESGKIISEEFYKNGNKIK >NC_003454.1|NP_602903.1|626376_627114_-|hypothetical-protein MKKLLLGLFLIGSVLTFTAERVVKMENAYVDDKGIVYIIGEKTPFTGIVENYKVPPISAGDSVLEGKIPFKNGVIEGSSKLYYPSGKLASVATFKNGKVEGIQKDYYENGKIKREISHKNGVVDGVSKLYYPNGKVQNESTHKKGVPDGVSKTYYENGKLLVEVTYKNGVQVGVQKDYYENGKLKVELPFKNGIIEGIAKVYYPSGKLMTEESYKNNQLDGIVKRYDESGKLIEQETYQNGNKIK >NC_003454.1|NP_602904.1|627125_628142_-|hypothetical-protein MKKLLLALFLIFSVLLFSAERKTPVEQTFKDENSGKVYVQGEKTPYTGIVEGKYSNGKVKILVSYKNGILNGKVLQYYENGKIKSEDTFMNEALNGVSKGYYENGKVEYEISYKNDKKDGIEKRYSNTGILVVEFSYKNDELNGIIKKYNENTGKLEMEALYKNDKIEGIAKSYYPSGKLEREQTYKNNIRDGISKEYYENGKLQMQTNYKNGQLEGINKRYSQKGVLEEEVEYKNGKMEGSSKLFYPSGKLKSIATFKNGLQVGVQKDYYEDGKLKLETLYKDGNKNGITKSYYPNGKVQVEVNFKNGQLDGVLKQFDENGRLINQETYQNGNKINN >NC_003454.1|NP_602905.1|628450_629020_-|hypothetical-protein MKKLLLGLFLLASALSFAAGRVLRDKEAEFKDGVVYVKGENKAYTGTLEGYNERGVLEARKEFKNGKMDGSSKIFYPNGKVLSEATFKDGNQVGVQKDYYEDGKIKAELPYKNDVIEGTMKEYYPNGKLKSNISMKNGKRDGLEKIYYENGKLKYELNYKNGEPYGNMKLYDETGNLVGEGPYFEVTTK >NC_003454.1|NP_602906.1|629125_629818_-|hypothetical-protein MLAFAAGEQRVPIEKVELNQQTSLVYLQGQQIPFTGIVEKKYASGKLEAALEFKDGKLNGKTLVYNESGKMKTEENYVNGALDGVSKSFYANGSVEFETTFRNNVKEGVEKHYSPSGRIETEVLFKNNVANGIAKQYNAEGKLEYETMIVNGKREGLSKKHYPSGKLLSEVTFRNDKEEGMMKGYFENGKLQLEIPYKNGQVDGLVKRYDENGQVVEQATFKNGQEIKAK >NC_003454.1|NP_602907.1|629887_632284_-|phenylalanyl-tRNA-synthetase-subunit-beta MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSDRLTLLKVNVGGEEPLQIICGAKNHKLNDKVVVAKIGAVLPGNFKIKKSKIRDVESYGMLCSEAELGFTKESEGIIILPEDAPIGTEYREYMNLNDVIFELEITPNRPDCLSHIGIAREVAAYYNRKVKYPMIEITETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPDWLKSRIRAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKKNEEITTLDGVDRVLKNGELVIADDEKAIAIAGVIGGQNTQIDNETKNIFVEVAYFTPENIRKTSRELGIFTDSAYRNERGMDVENLSNVMARAVSLIAEVAGGDVLSEVIDKYVEKPQRAEISLNLEKLNKFIGKNLTYDEVGKILTHLDIELKPLGEGTMLLIPPSYRADLTRPADIYEEVIRMYGFDNIEAKIPVMSIESGEENINFKMPRIVRGILKELGLNEVINYSFIPKFTKELFNFGDEVIEIKNPLSEDMAIMRPTLLYSLITNIRDNINRNQTDLKLFEISKTFKNLGAEKDGLAIEDLKVGIILSGREDKNLWNQSKTDYNFYDLKGYLEFLLERLNVTKYSLTRLENSNFHPGASAEIKIGEDIIGVFGELHPNLVNYFGIKREKLFFAELNLTKLLKYIKIKVNYESISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMSIILRDKNRTLTDGDIDTAMNTILELIKDKYNGEIRK >NC_003454.1|NP_602908.1|632297_633314_-|phenylalanyl-tRNA-synthetase-subunit-alpha MKEEILKVKEEIQTYIKESKTLQRLEEIRVNYMGKKGIFTELSKKMKDLSVEERPKIGQIINEVKEKINSLLDERNKALKEKELNERLESEIIDISLPGTKYNYGTIHPINETMELMKNIFSKMGFDIVDGPEIETVEYNFDALNIPKTHPSRDLTDTFYLNDSIVLRTQTSPVQIRYMLEHGTPFRMICPGKVYRPDYDISHTPMFHQMEGLVVGKDISFADLKGILTHFVKEVFGDRKVRFRPHFFPFTEPSAEMDVECMICHGDGCRLCKESGWIEIMGCGMVDPEVLKYVGLNPDEVNGFAFGVGIERVTMLRHGIGDLRAFFENDMRFLKQFK >NC_003454.1|NP_602909.1|633340_633802_-|hypothetical-protein MKKILVLSDSHSYFDKVLKIFEKEKPDIVIGAGDGIKDIEELSYVYPKAKYYMVKGNCDFFDRSHNEENLFEIDGIKVFLTHGHLYDVKRTLNSIKEIGKKLNVSLIVFGHTHKPYIEKDGNMTLFNPGATKDGRYGIIILEQGNIELFHKQL >NC_003454.1|NP_602910.1|633814_636250_-|DNA-gyrase-subunit-A MSNVDNRYIEEELKESYLDYSMSVIVSRALPDVRDGLKPVHRRILFAMNEMGMTNDKPFKKSARIVGEVLGKYHPHGDSAVYGTMVRMAQDFNYRYLLVEGHGNFGSIDGDSAAAMRYTEARMEKITAELLEDIDKDTIDWRKNFDDSLDEPTVLPAKLPNLLLNGAIGIAVGMATNIPPHNLGELVDGILAIIDNKDIEILELMNYIKGPDFPTGAIIDGRVGIIDAYKTGRGKIKVRGKVDIEELKNGKSNIIVSEIPYQLNKANLIEKIANLVKEKKITEISDLRDESNREGIRILIEVKKGEEPELVLNKLYKYTDLQTTFGVIMLSLVNNVPRVLNLKEMLNEYIKHRFDVITRRTAFDLDKAEKRAHILKGYQIALENIDRIIELIRASSDGTVAREQLIEKYAFTDIQARSILDMKLQRLTGLEREKIDTEFKEIETLIKELREVLEDNNKIYDIMKKELLELKEKYGDKRRTKIEEERMEILPEDLIKDEEIIITYTNKGYVKRIEASKYKAQRRGGKGVSALNTIEDDYAEKITSASTLDTIMVFTDRGKVYNIRAYEIPDLSRQSRGRLLSNIINLSEGEKVRDTIVIKEFSPEKEVVFITKKGLIKKTSLGEFKNINNSGLIAIKTREDDDLIFVGLIEDVNKEEILIATHDGYCTRFLTDTIRATGRSTQGVKAITLREGDAVVSAMLIKNPETDILTITENGYGKRTSLDEYPQYNRGGKGVINLKASEKTGKVVSVLEVTEDEELMCITSNGIVIRTSISEISRIGRATQGVRIMKVADDEKVAAITKIKKEEELED >NC_003454.1|NP_602911.1|636395_638315_-|DNA-gyrase-subunit-B MEEKMSYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPENIIEVMDNGRGIPTDIHPKYGKSAMEIVLTILHAGGKFENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGVVHYQKYHRGKPEEDVKVIGSCDESEHGTIVRFKADGEIFETLIYNYFTLSNRLKELAYLNKGLTIILSDLRKEEKKEETYKFDGGILDFLNEIVKEDTTIIEKPFYVSSEQDNVGVDVTFTYTTSQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSSSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSIGETFDIAKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKNILGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNIDI |
You can click texts colored in the table to view more detailed information
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NC_003454_4 | 625621-626041 | Orphan |
NA
Consensus repeat of NC_003454_4
|
6 spacers
spacers of NC_003454_4
>4.1|625646|35|NC_003454|CRISPRCasFinder TCTTCACTAATTATCTTTCCACTTTCATCATATAT >4.2|625706|20|NC_003454|CRISPRCasFinder TTTTTGTAACTTTCTTCTGC >4.3|625751|50|NC_003454|CRISPRCasFinder ACCTTTACAGTTCCAGTCGTAAGTCCATTTTTATCAATTGGATGCTCTAT >4.4|625826|47|NC_003454|CRISPRCasFinder CCTTTTTGTACTCCAACTTTTACTCCATTTTGATATGATACTTCTAC >4.5|625898|47|NC_003454|CRISPRCasFinder GTTCTAGTTATTCCATCTAGTACCTCTTTTTTTAAAAGCATTTCACT >4.6|625970|47|NC_003454|CRISPRCasFinder TTTTTCATTAAACCATCTATAAGTCCATTTTTATAAGAAGTTTCTCT |
CRISPR arrays and Neighbor proteins around NC_003454_4
The CRISPR arrays of NC_003454_4 >merge|NC_003454|4|625621-626041|CRISPRCasFinder TATTTTATTACCATTTTTATAAAATTCTTCACTAATTATCTTTCCACTTTCATCATATATTTTAACTATTCCATCTAGTTTATCATTTTTGTAACTTTCTTCTGCCATTATTTTTCCACTTGGATAATAAACCTTTACAGTTCCAGTCGTAAGTCCATTTTTATCAATTGGATGCTCTATTTTTAATTTTCCATTTTGATAATAACCTTTTTGTACTCCAACTTTTACTCCATTTTGATATGATACTTCTACTTTTAATTTTCCATTTTTATAATAAGTTCTAGTTATTCCATCTAGTACCTCTTTTTTTAAAAGCATTTCACTTCGAATATTTCCATTTGGATAATAATTTTTCATTAAACCATCTATAAGTCCATTTTTATAAGAAGTTTCTCTCTCTATTATTCCACTTTCATAATAG >NC_003454|4|2|625621-626041|CRISPRCasFinder TATTTTATTACCATTTTTATAAAAT TCTTCACTAATTATCTTTCCACTTTCATCATATAT TTTAACTATTCCATCTAGTTTATCA TTTTTGTAACTTTCTTCTGC CATTATTTTTCCACTTGGATAATAA ACCTTTACAGTTCCAGTCGTAAGTCCATTTTTATCAATTGGATGCTCTAT TTTTAATTTTCCATTTTGATAATAA CCTTTTTGTACTCCAACTTTTACTCCATTTTGATATGATACTTCTAC TTTTAATTTTCCATTTTTATAATAA GTTCTAGTTATTCCATCTAGTACCTCTTTTTTTAAAAGCATTTCACT TCGAATATTTCCATTTGGATAATAA TTTTTCATTAAACCATCTATAAGTCCATTTTTATAAGAAGTTTCTCT CTCTATTATTCCACTTTCATAATAG
>NC_003454.1|NP_602901.1|625087_625594_-|hypothetical-protein MKKIILGIFLIASALSFSAERKISAEQMIIDQNTEIIYAQGEKTPFTGIVEFKYENGKIQGLMGVKNGVLDGKGVTYYPSGKIQSKENYKNGVEDGINIIYYENGNVEYEKNVTDNGMTIYEKHYHSSGKLDFEATYKNRKLDGAVKKYGENGEVIQELIYKNGVRVK >NC_003454.1|NP_602900.1|624477_624933_-|hypothetical-protein MLGLIFSSCQLFTEAIKDNIHRYEIEETFKEYKKKDGSMAYQGNKEVFNIVKEVLKRPINKETQFDGIKIMIPENTRINSKIGTIIDIKTGYGLPISIYIKDYCDSSDDRVASKKRSAGGYYHINYLSQNKDTKLLFEKISKVNGFTKGCK >NC_003454.1|NP_602899.1|624099_624297_-|hypothetical-protein MIILIIMGLIFSSCQLFTEAIKDNMYRVERARERKELSKKDGPGAIVVDEYKEGVEAAIKDQKDQ >NC_003454.1|NP_602898.1|623827_624022_-|hypothetical-protein MDEKTGYGIHLLILRETDGCSNVYYYKKIREGLYYKLLYDKRDLEISKISEKIVKKNGFTKNYK >NC_003454.1|NP_602897.1|623258_623753_-|hypothetical-protein MTFIFLTACTNTEYTYSPKNYKNSDISILASLIESDNESSPLSYIWIYDLRNHYRNRERESYHNVKILSSKIKITNNGKEYIIRTEPNSDHIYVYKQGVIITGDFTAYIGQIQLDNGKIIDIPPLKFEKNIKIEKYSGLDDAFSKGVPRKEIFSGTVEDYKKQK >NC_003454.1|NP_602896.1|622523_623183_-|hypothetical-protein MKKLILGLFLVGSALSFSAERTLSYEETFLDKKNGKVYAIGEETPYTGIVENYKFLSGDRVLEGRIIFKNGLMEGTFKLLYPSGKTASIATYKNGETDGIQKEYYENGQIKMEVLHKNGKAEGYLRTYYLNGKLEGEEKYQNGLREGLTKSYYEDGSLEGERFYKNNNLEGINKIYHPNGKIQMEANFKDNKLEGIVKRYDENGKITSEEFYKNGNRIK >NC_003454.1|NP_602895.1|621997_622420_-|hypothetical-protein MVDDTTGITYVQGEKTPFTGTVEVKYDNGKVQALMEVKDGFLEGKTETYYPSGKIQSKENYKKGYEDGLNVLYYESGQIEYEKNTTNEGKTVHTKHYYPSGKIDFESTYKNGKLNGEVKKYDENGQLIQQGIFKDGVQVK >NC_003454.1|NP_602894.1|620987_621977_+|UDP-glucose-4-epimerase MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDSLITGHIDAVDEKAHLELGDLKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNNNVDKIVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRLRNGGDSQIFNLGNGEGFSVKEVIEVTRKVTGYPIPAEVSPRRAGDPARLIASSKKAIDELKWKPKYDKLEQIIETAWNWHKNHPNGYED >NC_003454.1|NP_602893.1|619458_620988_+|galactose-1-phosphate-uridylyltransferase MEICSLINRLIKYALKNSLITEDDVMFVRNELMALLHLKDWQDVKENCQIPEYPQEILDKICDYAVEQKIIEDGVTDRDIFDTEIMGKFTAFPREIIETFKELSQQNIKLATDFFYNFSKKTNYIRTERIEKNLYWKSLTEYGDLEITINLSKPEKDPKEIERQKNMPQVNYPKCLLCYENVGFAGTLTHPARQNHRVIPLTLDNERWYFQYSPYVYYNEHAIIFCSEHREMKINRDTFSRTLDFINQFPHYFIGSNADLPIVGGSILSHDHYQGGNHEFPMAKSEIEKEVIFDKYPNIKAGIVKWPMSVLRLKSLNRKDLVDLADKTLKAWREYSDEEVGVFAYTNSTPHNTITPIARKRGDYFEIDLVLRNNRTDEANPLGIFHPHSEHHNIKKENIGLIEVMGLAVLPGRLKFEMRKIAEYLKDEDFEKKISDDKDTAKHLTWLKAFINKYSNLKTLSVDEILENILNVEIGLTFSRVLEDAGVFKRDEKGKNAFLKFINHIGGRF >NC_003454.1|NP_602892.1|618289_619459_+|galactokinase MLENLIKDFKEIFKYSGEVERFFSPGRVNLIGEHTDYNGGFVFPCALDFGTYAVVKKREDKTFKMYSKNFENLGIIEFNLDNLIYDKKDDWANYPKGVIKTFLDRNYKIDSGFDVLFFGNIPNGAGLSSSASIEVLTAVILKDLFKLDVDIIEMVKMCQVAENKFIGVNSGIMDQFAVGMGKKDNAILLDCNTLKYEYVPVKLVNMSIVIANTNKKRGLADSKYNERRTSCEEAVKVLNNNEVNIKYLGELTVTEFEKVKHYITDEEQLKRATHAVTENERAKIAVEFLKKDDIAEFGKLMNKSHTSLRDDYEVTGLELDSLVEAAWEEKGTVGSRMTGAGFGGCTVSIVENDYVDSFIKNVGKKYKEKTGLEASFYIANIGDGAGKVK >NC_003454.1|NP_602903.1|626376_627114_-|hypothetical-protein MKKLLLGLFLIGSVLTFTAERVVKMENAYVDDKGIVYIIGEKTPFTGIVENYKVPPISAGDSVLEGKIPFKNGVIEGSSKLYYPSGKLASVATFKNGKVEGIQKDYYENGKIKREISHKNGVVDGVSKLYYPNGKVQNESTHKKGVPDGVSKTYYENGKLLVEVTYKNGVQVGVQKDYYENGKLKVELPFKNGIIEGIAKVYYPSGKLMTEESYKNNQLDGIVKRYDESGKLIEQETYQNGNKIK >NC_003454.1|NP_602904.1|627125_628142_-|hypothetical-protein MKKLLLALFLIFSVLLFSAERKTPVEQTFKDENSGKVYVQGEKTPYTGIVEGKYSNGKVKILVSYKNGILNGKVLQYYENGKIKSEDTFMNEALNGVSKGYYENGKVEYEISYKNDKKDGIEKRYSNTGILVVEFSYKNDELNGIIKKYNENTGKLEMEALYKNDKIEGIAKSYYPSGKLEREQTYKNNIRDGISKEYYENGKLQMQTNYKNGQLEGINKRYSQKGVLEEEVEYKNGKMEGSSKLFYPSGKLKSIATFKNGLQVGVQKDYYEDGKLKLETLYKDGNKNGITKSYYPNGKVQVEVNFKNGQLDGVLKQFDENGRLINQETYQNGNKINN >NC_003454.1|NP_602905.1|628450_629020_-|hypothetical-protein MKKLLLGLFLLASALSFAAGRVLRDKEAEFKDGVVYVKGENKAYTGTLEGYNERGVLEARKEFKNGKMDGSSKIFYPNGKVLSEATFKDGNQVGVQKDYYEDGKIKAELPYKNDVIEGTMKEYYPNGKLKSNISMKNGKRDGLEKIYYENGKLKYELNYKNGEPYGNMKLYDETGNLVGEGPYFEVTTK >NC_003454.1|NP_602906.1|629125_629818_-|hypothetical-protein MLAFAAGEQRVPIEKVELNQQTSLVYLQGQQIPFTGIVEKKYASGKLEAALEFKDGKLNGKTLVYNESGKMKTEENYVNGALDGVSKSFYANGSVEFETTFRNNVKEGVEKHYSPSGRIETEVLFKNNVANGIAKQYNAEGKLEYETMIVNGKREGLSKKHYPSGKLLSEVTFRNDKEEGMMKGYFENGKLQLEIPYKNGQVDGLVKRYDENGQVVEQATFKNGQEIKAK >NC_003454.1|NP_602907.1|629887_632284_-|phenylalanyl-tRNA-synthetase-subunit-beta MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSDRLTLLKVNVGGEEPLQIICGAKNHKLNDKVVVAKIGAVLPGNFKIKKSKIRDVESYGMLCSEAELGFTKESEGIIILPEDAPIGTEYREYMNLNDVIFELEITPNRPDCLSHIGIAREVAAYYNRKVKYPMIEITETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPDWLKSRIRAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKKNEEITTLDGVDRVLKNGELVIADDEKAIAIAGVIGGQNTQIDNETKNIFVEVAYFTPENIRKTSRELGIFTDSAYRNERGMDVENLSNVMARAVSLIAEVAGGDVLSEVIDKYVEKPQRAEISLNLEKLNKFIGKNLTYDEVGKILTHLDIELKPLGEGTMLLIPPSYRADLTRPADIYEEVIRMYGFDNIEAKIPVMSIESGEENINFKMPRIVRGILKELGLNEVINYSFIPKFTKELFNFGDEVIEIKNPLSEDMAIMRPTLLYSLITNIRDNINRNQTDLKLFEISKTFKNLGAEKDGLAIEDLKVGIILSGREDKNLWNQSKTDYNFYDLKGYLEFLLERLNVTKYSLTRLENSNFHPGASAEIKIGEDIIGVFGELHPNLVNYFGIKREKLFFAELNLTKLLKYIKIKVNYESISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMSIILRDKNRTLTDGDIDTAMNTILELIKDKYNGEIRK >NC_003454.1|NP_602908.1|632297_633314_-|phenylalanyl-tRNA-synthetase-subunit-alpha MKEEILKVKEEIQTYIKESKTLQRLEEIRVNYMGKKGIFTELSKKMKDLSVEERPKIGQIINEVKEKINSLLDERNKALKEKELNERLESEIIDISLPGTKYNYGTIHPINETMELMKNIFSKMGFDIVDGPEIETVEYNFDALNIPKTHPSRDLTDTFYLNDSIVLRTQTSPVQIRYMLEHGTPFRMICPGKVYRPDYDISHTPMFHQMEGLVVGKDISFADLKGILTHFVKEVFGDRKVRFRPHFFPFTEPSAEMDVECMICHGDGCRLCKESGWIEIMGCGMVDPEVLKYVGLNPDEVNGFAFGVGIERVTMLRHGIGDLRAFFENDMRFLKQFK >NC_003454.1|NP_602909.1|633340_633802_-|hypothetical-protein MKKILVLSDSHSYFDKVLKIFEKEKPDIVIGAGDGIKDIEELSYVYPKAKYYMVKGNCDFFDRSHNEENLFEIDGIKVFLTHGHLYDVKRTLNSIKEIGKKLNVSLIVFGHTHKPYIEKDGNMTLFNPGATKDGRYGIIILEQGNIELFHKQL >NC_003454.1|NP_602910.1|633814_636250_-|DNA-gyrase-subunit-A MSNVDNRYIEEELKESYLDYSMSVIVSRALPDVRDGLKPVHRRILFAMNEMGMTNDKPFKKSARIVGEVLGKYHPHGDSAVYGTMVRMAQDFNYRYLLVEGHGNFGSIDGDSAAAMRYTEARMEKITAELLEDIDKDTIDWRKNFDDSLDEPTVLPAKLPNLLLNGAIGIAVGMATNIPPHNLGELVDGILAIIDNKDIEILELMNYIKGPDFPTGAIIDGRVGIIDAYKTGRGKIKVRGKVDIEELKNGKSNIIVSEIPYQLNKANLIEKIANLVKEKKITEISDLRDESNREGIRILIEVKKGEEPELVLNKLYKYTDLQTTFGVIMLSLVNNVPRVLNLKEMLNEYIKHRFDVITRRTAFDLDKAEKRAHILKGYQIALENIDRIIELIRASSDGTVAREQLIEKYAFTDIQARSILDMKLQRLTGLEREKIDTEFKEIETLIKELREVLEDNNKIYDIMKKELLELKEKYGDKRRTKIEEERMEILPEDLIKDEEIIITYTNKGYVKRIEASKYKAQRRGGKGVSALNTIEDDYAEKITSASTLDTIMVFTDRGKVYNIRAYEIPDLSRQSRGRLLSNIINLSEGEKVRDTIVIKEFSPEKEVVFITKKGLIKKTSLGEFKNINNSGLIAIKTREDDDLIFVGLIEDVNKEEILIATHDGYCTRFLTDTIRATGRSTQGVKAITLREGDAVVSAMLIKNPETDILTITENGYGKRTSLDEYPQYNRGGKGVINLKASEKTGKVVSVLEVTEDEELMCITSNGIVIRTSISEISRIGRATQGVRIMKVADDEKVAAITKIKKEEELED >NC_003454.1|NP_602911.1|636395_638315_-|DNA-gyrase-subunit-B MEEKMSYEAQNITVLEGLEAVRKRPGMYIGTTSERGLHHLVWEIVDNSVDEALAGYCDKIEVKILPENIIEVMDNGRGIPTDIHPKYGKSAMEIVLTILHAGGKFENDNYKVSGGLHGVGVSVVNALSEWLEVEVRKNGVVHYQKYHRGKPEEDVKVIGSCDESEHGTIVRFKADGEIFETLIYNYFTLSNRLKELAYLNKGLTIILSDLRKEEKKEETYKFDGGILDFLNEIVKEDTTIIEKPFYVSSEQDNVGVDVTFTYTTSQNEVIYSFVNNINTHEGGTHVQGFRTALTKVINDVGKAQGLLKDKDGKLMGNDIREGVVGIVSTKIPQPQFEGQTKGKLGNSEVSGIVNTIVSSSLKIFLEDNPNITKIIIEKILNSKKAREAAQKARELVLRKSVLEVGSLPGKLADCTSKKAEECEIFIVEGDSAGGSAKQGRDRYNQAILPLRGKIINVEKAGLHKSLESSEIRAMVTAFGTSIGETFDIAKLRYGKIILMTDADVDGAHIRTLILTFLYRYMKDLITEGNIYIACPPLYKVSSGKQIIYAYNDLELKNILGQMNQDNKKYTIQRYKGLGEMNPEQLWETTMNPDGRLLLKVSIDNAREADMLFDKLMGDKVEPRREFIEEHAEYVKNIDI >NC_003454.1|NP_602912.1|638315_638588_-|hypothetical-protein MKVISISEIATFKISNDDRIKLMILKEKWKELFLELSQNSSIIDFKENTIYIKGYNSAVKHYIFTNKIKLIGQILENLEIKFEIEDIKIK |
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CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NC_003454_5 | 812206-812300 | Orphan |
NA
Consensus repeat of NC_003454_5
|
1 spacers
spacers of NC_003454_5
>5.1|812232|43|NC_003454|CRISPRCasFinder AAGATGATAAAATGATGATGAATGACAAAGGAATGAAAGACAC |
CRISPR arrays and Neighbor proteins around NC_003454_5
The CRISPR arrays of NC_003454_5 >merge|NC_003454|5|812206-812300|CRISPRCasFinder TAAAATGAATGATGCTCATATGATGAAAGATGATAAAATGATGATGAATGACAAAGGAATGAAAGACACTATGATGAAAGATGACAAAATGATGA >NC_003454|5|3|812206-812300|CRISPRCasFinder TAAAATGAATGATGCTCATATGATGA AAGATGATAAAATGATGATGAATGACAAAGGAATGAAAGACAC TATGATGAAAGATGACAAAATGATGA
>NC_003454.1|NP_603093.1|810992_811646_+|cytochrome-C-type-biogenesis-protein-CcdA MLNTELFIGAVYVAGLLSFFSPCIFPLLPVYIGMLSTSGKKSIIKTLVFVIGLSTSFVLLGFGAGSIGSFLISKTFRIISGVIVIIFGIIQMEIVKIPFLERTKLVDIKGKEDDSIWGAFLLGFTFSLGWTPCVGPILASILFISSGGGNPYYGALMMFIYVLGLATPFVILSLSSKYVLTKVSAIKKHLGIMKKIGGLLIIIMGILLLTDKLSIFL >NC_003454.1|NP_603092.1|809356_810559_-|hypothetical-protein MKALLYFFQARNLHDGDIRNPNLPLEIIITLKGEKGHIFQLRILNNPYQSIRYFIKNHISKPEKNNRNWEEIEEKDFKKQVSEISIFYVPAFMKASYLDYLVEKLFQNENLKKYYKHYKRFKNSINKKMSFGYYRHIFIEFLQEIIIKEKSHAFWKNSILLWEEPEFYLNPQQERACYDALLQNTKLGLMAVVSTNSSRFIELENYQSLCIFRRIKEDVEIYQYNGNLFSGDEVTVFNMNYWINPDRSEIFFAKKVILVEGQTDKIVLSYLAKNLGIFNYDYSIVECGSKSSIPQFIRLLNAFHIPYVVVYDKDNHYWRNETELENSTLKNKMIQNLIWKKLGEWVEFENDIEEEIYDESRDKKNYKNKPFYALETVINSNYIVPKRLEEKVRKIFEEIK >NC_003454.1|NP_603091.1|808745_809177_-|hypothetical-protein MTFGVIDSSQFFILTLPHLSIFPTFILLLDYYHSINHLNTSVFVMIILIPILRVIFSFIYNDFYTKNLLKEGYLPPEDDEYSNAILKGNRFLEYTKEDLLDKEKMERYRLIIEEYEQERKKDLINFVLIVILLILLIILLVYI >NC_003454.1|NP_603090.1|807167_808664_-|glycerol-3-phosphate-dehydrogenase MKITGWDSVFFAIFFILIRRNDMFDVVVIGAGIMGAAVSRELSKYELKILLLDKENDVSCGTTKANSAIVHAGYDAKEGSLMAKYNVLGNAMYEDLCKEVDAPFRRVGSYVLAFSEKEKEHLEMLYQRGVNNGVPEMEIIDAAEIQKREPHVSKEAVAALYAGTAGITGPWELTIKLVENAMENGVKLKLNSEVINIKKENNIFKIELKSGEVIKTKALINAAGVYADFINNMLSSKKFKITPRIGEYYLLDKVQGYLTDSVIFQCPTEMGKGILVSKTVHGNIIAGPTASDVENKDDVGNTQEGLDTVRQFATKSIKDVNFRDNIRNFAGLRAEADTGDFILGEAEDVKGFFNMAGTKSPGLTSAPAMAVDLSKMVVESLGGVKKKENFIKNRKMIYFISLSPEEKAKVIKKDPRYGRIICRCENITEGEIVDAIHRKCGGRTLNGIKRRVRPGAGRCQGGFCGPRVQEILARELGDDLEKIVMEQKDSYILTGKTK >NC_003454.1|NP_603089.1|805890_807156_-|sarcosine-oxidase-subunit-alpha MNIKYDLVIVGGGPAGLAAAVEARKNRIDNILVIERAKELGGILQQCIHNGFGLHEFKEELTGPEYAQRFMDQLFELNIEYKLDTMVLGISENKIVQAINSVDGYMIIQAKSVILTMGCRERTRGAIAIPGDRPAGIFTAGAAQRYINMEGYMVGKRVVILGSGDIGLIMARRLTLEGAKVLAVAELMPFSGGLTRNIVQCLDDYDIPLYLSHTVVDIIGKDRVEKVIIAKVDENKKAIHGTEIEYECDTLLLSVGLIPENDISRATGIKIDPRTNGPIVNELMETSIVGIFASGNVVHVHDLVDFVSIESRKAGKSAAKYIKGEVADGEYIEVQTGNGIGYTVPQKFRIENIEKNLELSMRVRQIYKNVKIVVKSNDFVIYSVKKNHMAPGEMEKITLSKTILGKIDANKIVVEVVEEDK >NC_003454.1|NP_603088.1|805546_805891_-|hypothetical-protein MEKEMICIVCPVGCHISVNTETYEVKGNSCPRGEVYGKEELTAPKRVVTSTVKIKNALDKRCPVKTEKSIPKELNFKLMDELKNIELIAPVKRGDIVIKNVFNTGVDVVVTKDM >NC_003454.1|NP_603087.1|804935_805412_-|hypothetical-protein MLRDDNNFLEKKDIFEQGILALHFDRPLEALKYLLLLEEEKNSAVSFNIALCYLKSQKYETVLFYLEKALAETKRNRSIEISKDNYPELLTFEEENDAYTKPMLYLTPLQFPDLAREQILRLMVDILFILEKKEEMYKTINSLKNKNYKNVKDKIKRS >NC_003454.1|NP_603086.1|803476_804880_-|ankyrin-repeat-containing-protein MSREEVLEYYRNADIEEKDNAQSSLLHIAAEHGDSLAIEVLLNRGMDANIENSEAEKPLHRLAEGTRHINNGEEIAKCAELLLDAKASVLRKDRFGRTPVILAAKNAYYEILKVFIDRGLKLSLKDSEGNSALHIACQYFSDYDEEDEERYFKTIKYLLEAGLDPNEKNNDDKTATDMAIKRCNKKIIALLLGNYDEENPNELLIQTGGLSLHRAIEKKDYEAVNALIKLGTDVNAFSEEEDTLFREMTPLGIAFYMFDEYSVKALLEAGADVNLKTTEENTALGEILGYMKDNYFSFNKIPLIEELLKLLLDNGLKINDTVDKKGNTAFIKACKSIDENNLSNGKTLAAVVAKFLLKENCDVNSTNLYGQTALMFLCASRDIESQDLQIQVLEAGADVGTMDKNGDTPLIYAAKNRNANSGKEMAELLFDFGDPKLEHVNNDGKTALEIATDLNNEEFVKFLLTKM >NC_003454.1|NP_603085.1|802479_803460_-|ankyrin-domain-containing-protein MDNSMIFLNACKNGQKGVVEAFIKKGGLDFNKRDSLGNTALFYACMKGSKDIVKLLLSNGADGSLANNNSMIPLHAVSKSGNKEIISLLLDKGSDINTTDKEGRTPLIYTLMENRTEAAKLLLEKGADTQIKDNDGHKAIDYATANGLRDIITLLLKNENNDNKNNSGNTPLHQACYNNQSEVVRELLKQDGIELNIVNDNGNTPLIIAAIESNLLIVQLLLKAGADAKQRLLNGNTALHFAAENGNQYIGKALLEAGAEIDGQNEMGETALLIAAMEGYNDFVKLLVENGANVNIIDNSQNSPLFYASEKGYTEIVEILLLAGAE >NC_003454.1|NP_603084.1|802096_802396_+|cell-division-inhibitor-MinE MGFFSNFFKKENSKDDAKNRLKLVLIQDRAMLPSGVLENMKDDILKVLSKYVEIEKSKLNIEMCPYEDDPRKIALVANIPILKSSTREVTKTTKQQKRK >NC_003454.1|NP_603095.1|812415_813312_+|bifunctional-methionine-sulfoxide-reductase-A/B-protein MEAYMEKIYGVIDVTSGYANGKTKNPKYQDLHSSGHAETVHVKYDASKVNLSTLLKYYFKIIDPTSVNKQGNDRGSQYRTGIYYVNQNDKSVIQDEIKEQQKKYSQKIVVEVLPLKEYYLAEEYHQDYLKKNPNGYCHIDLSKADDIIVDEKKYPKLSEKELRMKLNSKQYEVTQNGDTERAFQNDYWDFFDKGIYVDITTGEPLFSSTDKYASQCGWPSFVKPIVPEVVTYHNDTSFNMIRTEVRSRSGKAHLGHVFDDGPRDRGGKRYCINSAAIQFIPYAEMEAKGYGYLLPLVK >NC_003454.1|NP_603096.1|813342_814128_+|two-component-response-regulator-YesN MYKLMIADDEPLIRRGIKQLIDLSSLQIGEIYEASTGEEALKVFEEFKPEIVLMDINMPKIDGLSVAKKIKSINPDTKIAIITGYNYFDYAQTAIKIGVEDYILKPISKSDVSEIIVKLVSSLQKERKDKEIEKVLEKITTVDTQDNIAKNNYKELIQNIIEESYTDSQFTLSVLSEKLDLSSGYLSIMFKKNFGIPFQDYLLQKRMEKAKLLLLTTELKNYEIAEQVGFEDVNYFITKFKKYYQITPKQYREMVLKNENE >NC_003454.1|NP_603097.1|814114_815773_+|two-component-sensor-kinase-YesM MKMNNKPLNIKIGFYFLITNLVLVLLLGSIFYFSSSSLLIQKEISAKTEAIEKSGNYIELYMNKLTTLSQVISHDKGVYDYLKNKDESEKNRILNIIDNTLSTDPYIKSIILIRKDGAVISNEKNVNMEVSSDMMKEEWYVNSLMNPMPVLNPLRKQNFSLDGMDDWVISVSREIADTNGENLGVLLIDVKYQALHEYLQNQETGKNSDIVILDEDNRIVYYKEIPYDTSQEKYLKNLKNIEEGYNRKENTVTVKYPIKNTHWTLIEISYMQEIDSLKNHFFEMIVISCLASLLITVLINISVLRRITKPIKELEQHMNNFNNDLSKINLKGDVSIEILSLQNHFNEMIDKIKYLREYEINALYSQINPHFLYNTLDTIIWMAEFQDTEKVISITKALSNFFRISLSNGKEKIPLKEEINHIKEYLYIQKQRYEDKLEYKISIQEELENIEVPKIILQPFVENAIYHGIKNLDTTGIISIYSQIVENKIELIIEDNGIGFEAAKKQALMKMGGVGIKNVNKRIQYYYGKEYGAKIDSSFKTGARIIITLPYK >NC_003454.1|NP_603098.1|815891_817325_+|ATP-dependent-DNA-helicase-RecG MTIEEMKNLIQNGEKIDVEFKESKEALTKDIFDSVCSFNNRNGGHIFLGVSDKKEIIGVNKNKIDKIIKEFTTSINNPQKIYPPLYLVPLVVEIDEKIIVYIRVPKGYQVCRHNGKIWDRSYEGDINITDNSELVYKMYARKQSSYFVNKVYPNLKIDFLDINIIEKVRKMAILRNQNHTWKNLNDEELLRSANLILIDPETNKEGITLAAILLFGKDNSIMSVLPQHKTDAIFRVENKDRYDDRDVIITNLIDSYDRLISFGQKHLNDLFVLDGIINVNARDRILREIISNTLAHRDYSSGFPAKMIIDDEKIIIENSNLAHGIGELDLQKFEPFPKNPPISKVFREIGLADELGSGMRNTYKYTQLYSGMKPIFEEGNIFRTIIPLKEIATEKVGGENVSRNVPRNVPRNVPQKSIEEMKEIMKEIIKKNNRVSRKYLAEILGVSEKTITRYIKEIPNLSYIGKGKNGYWKLDEE >NC_003454.1|NP_603099.1|817481_819029_+|dipeptide-binding-protein MRNKKLGIIGIFVLCLLFLVACNKEKEKMAKPEEKEVVLRLEGGDFGYPNPFRHQNRGPGFFKMELIYDSLLEKDDNGLIPWLAKEWEVSEDGKTFTFTLVDGAKWHDGKDLTAEDVAFTVEYFKKHPPVRGGLMLNGEYLMDTVSVDGNKVIIHTVDYTPVALEKIGSMRIIPKHIWEKVDDPEKFSGEGDIVGSGPYKLVAYNSEQGSYKMEKNNEFWGLEAAATRIEWIPVSDRVLAFQNGEIDITVIPVDLLKNFENNKEFKIVKNFGLHNYRLYFNFDKVPVLQDKDVRQAIAYAIDRKELIDKLERGSGLEGSQGYLPPTHSMYNKNLPAYSYNVEKAKELIKGKTFEVELLVGNSPKEVKMAELIKIRLEEIGISVKVVSIDSKARDSKVRDKDYQMAIMKSGGMGADPDMLREIYSSKSKKGELAGYHNEALDKLLFQQSTEKDVEKRKELIYKIQEVLAEEIPMLLLYGEIENTVYRPEKYDYWTTRYDHTKLDHPKLSYVIRPKK >NC_003454.1|NP_603100.1|819025_819982_+|peptide-ABC-transporter-permease MKKKYIVLFFILLTIHFMLPRIMKADPFVFLSSDGTEVASYTEEEILKYKQYYGLDMPLWRQYLNYLLGIFTGNLGYSIYFKEKVTTLIFSRLVWTAGIVIFSLCISSVFGLFLGSFSAWNYQRKVDTILYQGMVIISEIPSFLIANMILMFFIIKWRILPTAGGITPFIKIEFSWNFILDIIKHAILPGLTLTFLRLPDFYFVSRSAMLQQIQKKYVETAQAKSLGDIYILMRHCLPNAINPIMTRFLLSIQTMFNATLIVENVFKYPGIGKLIRDAVFYRDYLLLQGIFLVITIFILTISFLGENFYQTIEKRKEL >NC_003454.1|NP_603101.1|819978_820803_+|peptide-ABC-transporter-permease MRIKEINLKLSYVFLFFILILAILPYFSFLKSGTIPSGTALLPPSKEHWFGTDDLGIDIFSEICYGAKNTIILSCSSALFAAIGGSVIGMVAGYFGGIFDEILLGIIDFFISVPDLLLMVVLGTFLGPSLRNIVFSIVLVSWIMPAKITRSQILRMKQENYIKIAKIYGAGFIHLFLWHFWKPFFSIIMISVIKLMNRAILAEAALSYLGLGDPLSKSWGMIITRAMDFPNIYLTEFWKWWLVYPVTFMVLMVLSIAIIGQKIERKIGGVYRTQ >NC_003454.1|NP_603102.1|820697_822467_+|peptide-ABC-transporter-ATP-binding-protein MVSISCNIYGPYGFIHCYYWSKNRKKNWRSIQNTMTEILKVENLTITYYSHSGSSQIGVKNVNFSLNEGEIYGIVGESGSGKSTILLAIMGLLYERAKIEGKIYFKGKEIQNLNKKEMKEVCFKEIGLIFQNQMESLNPSLTIEKQILEILRKKFSDKNELQKKLDEVLEMVGLELKNKKKYPHELSGGMRQRVFIAMGICLNPPLLLIDEPTTALEEESKKNILNLLKDIKRKYNTTMLIISHDFEVIEYLTEKVLILLRGNLIEKGRTEKILEEPKHPYTFALLQSSTFLNPWKDLWGIKEEEDEKYPCPFYKRCTQKVEACLNYIPYLKSDIEEGVACYKNGIEKLLVLKNIRKLFKTSEQKVEAVKNCSLRVRQGEIVALLGKSGSGKTTLLRIIAGLLSKDAGEICFFQEKIEKNNLISREKCLQIIEQDPFSSMNPSLTVEEIIAEPTVILHKKNLALCKETVVENLKKVGLETNYNFLKKQANELSGGQRQKVAIARALSMDPKLLLADEISSMLDESGKLNIMRLLKQLQHNIGFSVLLVTHDITLAKKVADYIYYMDSGCIIEEGSVRKIFCKKRGNDGY >NC_003454.1|NP_603103.1|822456_822807_+|FUR-family-transcriptional-regulator MDINERSKFKHLTAFILVLLAEKNYSPREVKKSLLENFPGFTRDMSTVYRCLSSLEKEGLVTVDWYLPDGGAAKKIYSLTEKGWEALYEWKKDIVIRKRNFEVFLKKIENLIEGEK >NC_003454.1|NP_603104.1|822803_823604_+|methyltransferase MNIEEFEKIMQREDKKENQEDLEKIWDSKSEWFFKRTEKKQENFSDRLIFRMIKEKNLLNENSKVLDIGCGTGRHLLEFSKFTSYVTGTDISSKMLDYAKEKLKNVREAKFVHGNWMENFTKEKEFDLVFASMTPAITTIEHIKRMCLISKKYCLMERFVYNRDLIREEIEGILGRKLNKLHSNQKEYTYGVWNIVWNLGYFPEIYYDKYVYEAEKTVVDYMEQIIYTDEEKNKIIEFLKGKEKNGKIMSKEYVIKAIILWDVNIF |
You can click texts colored in the table to view more detailed information
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NC_003454_6 | 1396321-1396570 | Orphan |
NA
Consensus repeat of NC_003454_6
|
3 spacers
spacers of NC_003454_6
>6.1|1396355|45|NC_003454|PILER-CR,CRISPRCasFinder TTAATTAAAGATTATTTTGAAAGTGGAAAAATAAAAGCTGAAATT >6.2|1396434|38|NC_003454|PILER-CR CCTGCAAAAGAATATTATGAAAATGGGCAAGTATATAT >6.3|1396427|45|NC_003454|CRISPRCasFinder CCTGCAAAAGAATATTATGAAAATGGGCAAGTATATATTCAAGAA >6.4|1396499|45|NC_003454|CRISPRCasFinder GAATCACTTAATTTTGATGAAAATGGAAATTTAAAATCAAAAGAA |
DinG |
CRISPR arrays and Neighbor proteins around NC_003454_6
The CRISPR arrays of NC_003454_6 >merge|NC_003454|6|1396321-1396570|PILER-CR,CRISPRCasFinder TGAAGAAAATTATAAAGATGGTGAACTAGATGGATTAATTAAAGATTATTTTGAAAGTGGAAAAATAAAAGCTGAAATTAATTATAAAAATGGTGAACTAGATGGACCTGCAAAAGAATATTATGAAAATGGGCAAGTATATATTCAAGAAAGCTATAAAAATGGTGAGCTAGATGGAGAATCACTTAATTTTGATGAAAATGGAAATTTAAAATCAAAAGAAGTTTATAAAAATGGAGAATTGGTTGAA >NC_003454|6|2|1396321-1396498|PILER-CR TGAAGAAAATTATAAAGATGGTGAACTAGATGGA TTAATTAAAGATTATTTTGAAAGTGGAAAAATAAAAGCTGAAATT AATTATAAAAATGGTGAACTAGATGGACCTGCAA AAGAATATTATGAAAATGGGCAAGTATATATTCAAGAA AGCTATAAAAATGGTGAGCTAGATGGA >NC_003454|6|4|1396328-1396570|CRISPRCasFinder AATTATAAAGATGGTGAACTAGATGGA TTAATTAAAGATTATTTTGAAAGTGGAAAAATAAAAGCTGAAATT AATTATAAAAATGGTGAACTAGATGGA CCTGCAAAAGAATATTATGAAAATGGGCAAGTATATATTCAAGAA AGCTATAAAAATGGTGAGCTAGATGGA GAATCACTTAATTTTGATGAAAATGGAAATTTAAAATCAAAAGAA GTTTATAAAAATGGAGAATTGGTTGAA
>NC_003454.1|NP_603634.1|1395504_1395834_-|hypothetical-protein MPHLKIRGIEKNLIVENSKEIIDELTKIIGCDRNWFTIEHQNTKYIFDGKIVDGYTFVELYWFARDEKIKKEVADFLTKFIKKINNNKDCCIIFFTLTGDNYCDNGEFF >NC_003454.1|NP_603633.1|1394747_1395503_-|methyltransferase MDKKLIANWLEEEKNAHIQGWDFSYIHGRYEEENDLPWDYKNIIKQYLKAEYKLLDIDTGGGEFLLTFEHPFKNTSVTENYPPNIEFCKKNLVPLGINLYETDGASLLPFKDNEFDIIINKHGNFNISELFRILKTGGIFITQQVGAENDKELIELLLPKTEFPFPNLYLKNISKKFKETGFKILQEQEAFCPIKFYDIGALVWYAHIIEWEFPNFSVNNCLENLFKAQEILEKQGVVEGKIHRFLIVAQK >NC_003454.1|NP_603632.1|1392805_1394659_+|cell-surface-protein MYSLKIKFYLGGSFFMKKSVSLKLIIFSFLLVSGSITYSATPTIEAGTGTDSTEAGIDNEASKEKSSAFGYKNIADGEESSAFGFSNTASGKRSSAFGHSNKASGERSSAIGYNNEVTGLESSVLGNNYKVTGNHSGAFGIGTYDEVNRVYKRINGGGNSYMIGNDNNIAKGANDNFILGNGVDIGVDSNGRKIEGSVVLGHGSSVSESEVVSVGTPDGGRRIVNVREARITATSNDATTGKQLYQVAKATSTDIDVAAWKAKLGVGSGGVDLTVYSKRDASNLTATDISAWRTKLGVGAGGGGGIVNTATGTGSTGLGIDNTVTGDYSTAIGYKNNVSGNKSGAFGDPNVVTGNGSYAFGNDNTINGNNNFVLGNNVTIGSGIQNSVALGNNSTVSSSNEVSVGSATQKRKITNVADGDVSATSTDAVTGRQLYKAMQNSGATGIENLRNEVNEKIDDVKDEVNHVGSLSAALAGLHPMQYDPKAPTQVMAALGHYRNKQSVAVGLSYYFNDRFMVSAGVAIGGERRVKSMANVGFTVKLGKGSGVEYNETPQYVVQNEVKRLTVENQNLKSQVNNQGKENQELKAEINSLNTKNKEQDEKIKNLEEKLNRLLKNK >NC_003454.1|NP_603631.1|1390948_1392655_+|Fe-S-oxidoreductase MKFLPTTKEEMKNLGWDSIDVLLISGDTYLDTSYNGSVLVGKWLVEHGFKVGIIAQPEVDVPDDITRLGEPNLFFAVSGGCVDSMVANYTATKKRRQQDDFTPGGVNNKRPDRAVLVYSNMIRRFFKGTTKKIVISGIESSLRRITHYDYWTNKLRKPILFDAKADILSYGMGEMSMLQLANALKNGEDWKNIKGLCYLSKEMKQDYLSLPSHSECLADKDNFIEAFHTFYLNCDPITAKGLCQKCDDRYLIQNPPSESYSEEIMDKIYSMEFARDVHPYYKKMGAVRALDTIKYSVTTHRGCYGECNFCAIAIHQGRTIMSRSQSSIVEEVKNIAGTPKFHGNISDVGGPTANMYGLECKKKLKLGACPDRRCLYPKKCLHLQVNHNNQVELLKKLKKIPNIKKIFIASGIRYDMILDDNKCGQMYLKEIIKDHISGQMKIAPEHTEDKILGLMGKDGKSCLNEFKNQFYKINNELGKKQFLTYYLIAAHPGCKDKDMMDLKRYASQELRVNPEQVQIFTPTPSTYSTLMYYTEKDPFTNQKLFVEKDNGKKQKQKDIVTEKRKNRK >NC_003454.1|NP_603630.1|1389703_1390942_+|peptidase-T MDSKKYSTLKERFLRYVKFNTRSDDASETIPSTPSQMEFAKMLKKELEELGLSNIFINKACFVNATLPSNIDKKVATVGFIAHMDTADFNAEGISPQIVENYDGKDIVLNKEQNIVLKVEEFPNLKNYISKTLITTDGTTLLGADDKSGIVEIIEAVKYLKEHPEIKHGDIKIAFGPDEEIGRGADYFDVKEFAADYAYTMDGGPIGELEYESFNAAQAKFKIKGVSVHPGTAKGKMINASLIASEIIEMFPKDEVPEKTEGYEGFYFLDEMKSNCEEGEVVYIIRDHDKAKFLAKKEFVKELVEKVNKKYGREVVKLELKDEYYNMGEIIKDHMYVVDIAKQAMENLGIKPLIKAIRGGTDGSKISFMGLPTPNIFAGGENFHGKYEFVALESMEKATDVIVEIVKLNAER >NC_003454.1|NP_603629.1|1388409_1389600_+|hypothetical-protein MFENVVGLIVEYNPFHNGHLHHIQEIDRLFEDNIKIAVMSGDYVQRGEPSLINKLEKTKIALSQGIDIVIELPTFYSTQSAEIFAKGSVNLLNKLSCSHIVFGSESNDLDKLKRIATISLTKEFELSLREFLAEGFSYPTAFSKVLFDEKLGSNDILALEYLRAIKTINSKIEAYCIKREKTGYYDDEKDNFSSATYIRKILLDSNEKKENKLNKIKNLVPEFSYKILEENFGVFSCLSDFYDLIKYNIIKNCSELKNIQDLEIGLENRLYKYSLENLKFEDFFNEVLTKRITISRLQRILLHSLFNLTENITEKVKNEVPFVKILGFSTKGQKYLNYLKKSKNYNERKILTSNRNLKEILNEEEAKLFNFNELCSQIYRIKSSYINIGYPIIKKD >NC_003454.1|NP_603628.1|1387859_1388393_+|hypothetical-protein MKKIILYLFLLGTSLSFGATNDLPDNVEKKIRSAVSTFSGSEKRENYAWYKDSYLEMVERLDKSGIPETDKQMIIKRLEAMYGGNYPKQLARVNDEINDYKGLVNRIREEQNAVQQKTEAENQKSKEEIKSILSSSSIPKVDLDKIEQNAKAEYPNDYTLQKAYIKGAIKTYNDLKK >NC_003454.1|NP_603627.1|1387216_1387831_+|phosphoglycerate-mutase MKKIIIFFLLIIAITGNSEIIKEKKILRKETMELILVCHEKIQSDFENIDLSPSGIEAVKQLAEKMKKNYSFDIAYTSNLKIANRTLNYILEEMNELEIPINKSETLNTITRKDLEGKNVFESLKSYWKSDISKNLKEGKNVLIVTDEDTIRILIKYLLDMSDRDIQDVYIPIDNTFYFEVDKNLEVISAGFPIQKVLERIDEF >NC_003454.1|NP_603626.1|1386493_1387180_+|2,3-bisphosphoglycerate-dependent-phosphoglycerate-mutase MKLVLIRHGESAWNLENRFTGWKDVDLSPKGMEEAKSAGKILKEMNLVFDVAYTSYLKRAIKTLNIVLEEMDELYIPVYKSWRLNERHYGALQGLNKAETAKKYGDEQVHIWRRSFDVAPPSIDKNSEYYPKSDRRYADLADSDIPLGESLKDTIARVLPYWHSDISKSLQEEKNVIVAAHGNSLRALIKYLLNISNEDILNLNLVTGKPMVFEIDKDLKVLSSPELF >NC_003454.1|NP_603625.1|1385574_1386210_-|hypothetical-protein MDIGPCSIPTGEFLVGDPLVYLGSKYEKEYFQKIPTGEFRTEICVVKASDGDCDRYAAVRLKFNDNEISYFEEAMKGIEDLKDINEGDFFGFNVDAGLACICDKKLHDLYCEFDEKFVKENPDGNAYDDYFADLFKKSYEDNPKYQRDGGDWINWTIPGTDYHLPIFQSGFGDGAYPVYLAYDKDGNVCQLIVELIDIELAYSEIDEEDEE >NC_003454.1|NP_603636.1|1397106_1397745_-|formiminotetrahydrofolate-cyclodeaminase MKLVELDVLKFLDIVDSNSPAPGGGSVSALASSLGASLARMVAHLSFGKKNYEALADDVKAKFVANFDELLKIKNELNDLIDKDSEAYNTVMAAYKLPKETDEEKAARSAEIQKSLKYAIQTPYDIVVLSGKAISLLGEILANGNQNAITDIGVGTMLLMVGLEGGILNVKVNLSSIKDTAYVEKITKEIYDIKATAEKEKERIMGIVNAAL >NC_003454.1|NP_603637.1|1397762_1399004_-|imidazolonepropionase MQADLVLYNIGQLVTSRELDKTKKMDNIEVIENNGYIVIEKDKIVAVGSGEVLKEYLTPATEMVDLSGKLVTPGLIDSHTHLVHGGSRENEFAMKIAGVPYLEILEKGGGILSTLKSTRNASEQELIEKTLKSLRHMLELGVTTVEAKSGYGLNLEDELKQLEVTKILGYLQPVTLVSTFMAAHATPPEYKDNKEGYVQEVIKMLPIVKERNLAEFCDIFCEDKVFSVDESRRILTVAKELGYKLKIHADEIVSLGGVELAAELGATSAEHLMKITDSGINALANSNVIADLLPATSFNLMEHYAPARKMIEAGIQIALSTDYNPGSCPSENLQFVMQIGAAHLKMTPKEVFKSVTINAAKAIDKQDTIGSIEVGKKADITVFDAPSMAYFLYHFGINHTDSVYKNGKLVFKK >NC_003454.1|NP_603638.1|1399080_1400046_-|glutamate-formiminotransferase MAKIVECIPNYSEGKDLAKIERIVAPYKNNPKIKLLSVEPDANYNRTVVTVLGDPEEVKKAVIESIGIATKEIDMNVHKGEHKRMGATDVVPFLPIQEMTTEECNEISKEVGKAVWEKFQLPVFLYESTATAPNRVSLPDIRKGEYEGMAEKLKQPEWAPDFGERAPHPTAGVTAIGCRMPLIAFNINLATTNMDIPKEIAKAIRFSSGGFRFIQAGPAEILDKGFVQVTMNIKDYTKNPIYRIMETVKMEAKRWGVKVTGCEIIGATPFASLTDSLKYYLACDGIKDDVDAMSMDKVVELMIKYLGLTDFDVKKVLEANI >NC_003454.1|NP_603639.1|1400260_1400731_+|hypothetical-protein MTNNDFLRRLRYALNIKDNVMVQIFKKGNVLLTREDVIDYLKKDIDEGFKKLSNNDLIAFLDGLITQKRGKKEDGTPVPQVKVTKNNLNNILLRKLRIALAFKSYDMIKIFKLGGIEISEGELSALFRSEDHKNYKECGDKYIRVFLKGLTEYYRN >NC_003454.1|NP_603640.1|1400989_1403215_+|ATP-dependent-helicase-DinG MELELSEELYNRRNIAYSLLSSDLDDFYFVQDIDRLFLEEVNIENYFSKDGILAKEIKGFEYRKEQEEMAHYIQDAINEDRKIIIEAGTGTGKTLAYLIPAIKWAVVNKKKVIIATNTINLQEQLLLKDIPLAKSIIKEDFSYVLVKGRSNYLCKRLFNELSIGRSIDIEIFSMEAREQIECILKWGNKTKTGDKAELPFEVYPDVWELIQSTTELCLGKKCPYRKECFYMKTRMEKMEADILISNHHVFFADLNVRAETDFDSEYLILPRYDMVIFDEAHNIESVARSYFSVEVSKISFTRLLNRIYQKKNKRKKEKSALIRVEDTIDEKDLEDSQQYAYLLNTLKEEISILQNIGDEYFDEIRKIYETNTEAPIRKSLNNFEMTKSRFLETLRDKKDIFQSKLADFLTLMMSFNNVIDEEKEKNPEVINFNNHLKMFKAYIDSFKFINSFEDDNYIYWLDINSKRTNVLLTATPLNIAEKLSTVLFDNLDRLVFASATIVANGNFDYFKKSLGLDEEDCIECIIKSPFNYDEQMSVYIPTDIQDSENISAFVTDASKFILNILLKTDGKAFILFTSYTMLNQIYYSISKKLMNKGFEVFLHGDKPRSQLIKEFKEAENPILFGTTSFWEGVDVQGENLSNVIITKLPFLVPTDPVVSAISKKIEEDGGNSFTDFQLPEAIIKFKQGVGRLIRKKTDSGNIFILDNRILKKRYGSLFINALPSQKNIKILEKDDIIEEIE >NC_003454.1|NP_603641.1|1403211_1403418_+|metal-dependent-phosphohydrolase MRKKGKFMKKFTIFGFKFLFDIKKKDSSDEERYSDSYFLKEKVFYLILALFLILFHQKYLYFLEIITI >NC_003454.1|NP_603642.1|1403414_1405304_+|metal-dependent-phosphohydrolase MTGDVVKSDIYSPKTIVFRDKIGKDKLIQDMIDRLDKDYIYSSEAADIYIEEFDNFHKEIIAIKKGNLKSFDYSGFERKTGKVMPERIINKLLEEDEEKIDETFSKLTTQLENAYKAGIYKEKNSIRINEPAKTDIEALEPFEREIINNFLIPNYIYDEAKTRNTINEKVSQINDQYIEIKAGTLIAKTGEVLTDRKIDILDRLGIYNYKMSIFIIALNLIFLLVISSIFNVVTTKFYSKEILEKNKYRAIMLLTIATLLVFRIVPSSMIYLLPLDTMLLLLLFIVKPRFSVFLTMIVISYMLPITDYDLKYFTIQSIAIFATGFLSKNISTRSSVIAIGIQLAILKILLYLILSFFSVEESYGVALNTIKIFISGLFSGMFAIALLPYFERTFNILTIFKLMELADLSHPLLRKLSIEAPGTFQHSMMVATLSENAVIEIGGDPTFTRVACYYHDIGKTKRPQYYVENQTDGKNLHNDISPFMSKMIILAHTREGAEMGKKYKIPKEIRDIMFEHQGTTLLAYFYNKAKEIDPNIQEEEFRYSGPKPQTKESAVILLADSIEAAVRSLDLKDPVKIEQMVRKIVDSKIRDNQLSDANITFREVEIIVNSFLKTFGAIYHERIKYPGQK >NC_003454.1|NP_603643.1|1405320_1405809_+|metal-binding-protein MELIVDFSSDLQTEKYNMFIDTLYENNHLENYIKKVLNLEKIESDRPLYLSLLLTDNENIQVINREYRDKDAPTDVISFAYHETEDFNIGSYDTLGDIIISLERVEEQASEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKLMREREEAILSSFGYTRDK >NC_003454.1|NP_603644.1|1405828_1406344_-|NUDIX-family-phosphohydrolase MKILDTPNLKFLKVGVDTDPLNNHNLEYLEKQNAIAALILNHSGDKVLFVNQYRAGVHNYIYEVPAGLIENDEKPIVALEREVREETGYKREDYDILYDSNTGFLVSPGYTTEKIYIYIIKLKSDDIVPLDLDLDETENLYTRWIDIKDAGKLTLDMKTIFSLHIYANLIK >NC_003454.1|NP_603645.1|1406340_1407633_-|hypothetical-protein MLILIFFINYVINEHENIFIGMYKIITSPAVLVTDFIQVGGIGAAFLNAILIFSFNFFLVKSFKVKITGITIAAFFTVFGFSFFGKNILNILPFYLGGILYSIYTSTDFSEHIVPIAFSSALAPFVSSIAFYGDISYETSYINAILIGVLIGFIVVPLARSLYDFHEGYDLYNLGFTAGILGSVIIAVLKLYHFEITPQFLLSTEYDTPLKILCSAAFISLIIIGFYINDNSFSGYFSLIKDDGYKSDFTQKYGYGLTFINMGIMGFISMGFVIITGQTFNGPVLAALFTVVGFSANGKTIFNTIPILIGILLASLGSKGSIFTLAISGLFGTALAPISGIFGPIAGIIAGWLHLAVVQNVGLVHGGLNLYNNGFSAGIVAGFLLPIFNMITDNNNQRKMNIQRKHMNFLKNVQANIKKRIHKKEDEEKE |
You can click texts colored in the table to view more detailed information
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NC_003454_7 | 1836310-1837401 | Unclear |
NA
Consensus repeat of NC_003454_7
|
16 spacers
spacers of NC_003454_7
>7.1|1836340|37|NC_003454|CRT TTATTCTTTCCCTGCAATCATTTATATCTTGTTCGAT >7.2|1836407|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder TTCTATAAATTTCAAATGTCTTACTATCTTTCCAT >7.3|1836472|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder TAAAAAACTCCTATCAGAAAAATTACCTTTTTTAAT >7.4|1836538|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder GAAGTGCTTTTGTAGAATATTTAAAGTATTGAAAA >7.5|1836603|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder CTTAGAACAAAGAGCAGAATTATTAAAAAATTCTC >7.6|1836668|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder TTTATCAGAAGCTTTTGAATTACCAGTTGTAGTAT >7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder AAATTGAACAGGAAAATTTAAAAAATAAAGAAAAAA >7.8|1836799|38|NC_003454|CRT,PILER-CR,CRISPRCasFinder TTGCTCTGTATCTTTTATTAGCTTTGTTTTGTTGTTCC >7.9|1836867|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder ATATAGTATGTATCATCAATTAAATACGCTTCTTC >7.10|1836932|39|NC_003454|CRT,PILER-CR,CRISPRCasFinder GAGAACTTACTACAAAGGTGGGAATCCAGTCAAAAAAAT >7.11|1837001|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder AAGAGATTTTTTATTTGAATTAGCTAATGAAGCTAC >7.12|1837067|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder TAGATTATTGACTTCATTTAATCCTGGAATAGTTAC >7.13|1837133|38|NC_003454|CRT,PILER-CR,CRISPRCasFinder TAAAAAACTTCTTTGAAATTATAACCACTGTCAGATTT >7.14|1837201|39|NC_003454|CRT,PILER-CR,CRISPRCasFinder GAATACTTGAATCTTTTAACTTAAACATCTGTAATACTT >7.15|1837270|34|NC_003454|CRT,PILER-CR,CRISPRCasFinder CTGTTGATTCAAATAATAAATTAGTTGGAAGTAG >7.16|1837334|38|NC_003454|CRT,PILER-CR,CRISPRCasFinder TCAAAAATACATTATGTCAATGAATTAACTCAAAACTC |
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6 |
CRISPR arrays and Neighbor proteins around NC_003454_7
The CRISPR arrays of NC_003454_7 >merge|NC_003454|7|1836310-1837401|CRT,PILER-CR,CRISPRCasFinder TTGGGGTCAGTACATTTTAAATACATAAATTTATTCTTTCCCTGCAATCATTTATATCTTGTTCGATATTTAAATTCTAATATAGAAATACATAAATTTCTATAAATTTCAAATGTCTTACTATCTTTCCATATTTAAATTCTAATATAGAAATACATAAATTAAAAAACTCCTATCAGAAAAATTACCTTTTTTAATATTTAAATTCTAATATAGAAATACATAAATGAAGTGCTTTTGTAGAATATTTAAAGTATTGAAAAATTTAAATTCTAATATAGAAATACATAAATCTTAGAACAAAGAGCAGAATTATTAAAAAATTCTCATTTAAATTCTAATATAGAAATACATAAATTTTATCAGAAGCTTTTGAATTACCAGTTGTAGTATATTTAAATTCTAATATAGAAATACATAAATAAATTGAACAGGAAAATTTAAAAAATAAAGAAAAAAATTTAAATTCTAATATAGAAATACATAAATTTGCTCTGTATCTTTTATTAGCTTTGTTTTGTTGTTCCATTTAAATTCTAATATAGAAATACATAAATATATAGTATGTATCATCAATTAAATACGCTTCTTCATTTAAATTCTAATATAGAAATACATAAATGAGAACTTACTACAAAGGTGGGAATCCAGTCAAAAAAATATTTAAATTCTAATATAGAAATACATAAATAAGAGATTTTTTATTTGAATTAGCTAATGAAGCTACATTTAAATTCTAATATAGAAATACATAAATTAGATTATTGACTTCATTTAATCCTGGAATAGTTACATTTAAATTCTAATATAGAAATACATAAATTAAAAAACTTCTTTGAAATTATAACCACTGTCAGATTTATTTAAATTCTAATATAGAAATACATAAATGAATACTTGAATCTTTTAACTTAAACATCTGTAATACTTATTTAAATTCTAATATAGAAATACATAAATCTGTTGATTCAAATAATAAATTAGTTGGAAGTAGATTTAAATTCTAATATAGAAATACATAAATTCAAAAATACATTATGTCAATGAATTAACTCAAAACTCATTTAAATTCTAATATAGAAATACATAAAT >NC_003454|7|2|1836310-1837401|CRT TTGGGGTCAGTACATTTTAAATACATAAAT TTATTCTTTCCCTGCAATCATTTATATCTTGTTCGAT ATTTAAATTCTAATATAGAAATACATAAAT TTCTATAAATTTCAAATGTCTTACTATCTTTCCAT ATTTAAATTCTAATATAGAAATACATAAAT TAAAAAACTCCTATCAGAAAAATTACCTTTTTTAAT ATTTAAATTCTAATATAGAAATACATAAAT GAAGTGCTTTTGTAGAATATTTAAAGTATTGAAAA ATTTAAATTCTAATATAGAAATACATAAAT CTTAGAACAAAGAGCAGAATTATTAAAAAATTCTC ATTTAAATTCTAATATAGAAATACATAAAT TTTATCAGAAGCTTTTGAATTACCAGTTGTAGTAT ATTTAAATTCTAATATAGAAATACATAAAT AAATTGAACAGGAAAATTTAAAAAATAAAGAAAAAA ATTTAAATTCTAATATAGAAATACATAAAT TTGCTCTGTATCTTTTATTAGCTTTGTTTTGTTGTTCC ATTTAAATTCTAATATAGAAATACATAAAT ATATAGTATGTATCATCAATTAAATACGCTTCTTC ATTTAAATTCTAATATAGAAATACATAAAT GAGAACTTACTACAAAGGTGGGAATCCAGTCAAAAAAAT ATTTAAATTCTAATATAGAAATACATAAAT AAGAGATTTTTTATTTGAATTAGCTAATGAAGCTAC ATTTAAATTCTAATATAGAAATACATAAAT TAGATTATTGACTTCATTTAATCCTGGAATAGTTAC ATTTAAATTCTAATATAGAAATACATAAAT TAAAAAACTTCTTTGAAATTATAACCACTGTCAGATTT ATTTAAATTCTAATATAGAAATACATAAAT GAATACTTGAATCTTTTAACTTAAACATCTGTAATACTT ATTTAAATTCTAATATAGAAATACATAAAT CTGTTGATTCAAATAATAAATTAGTTGGAAGTAG ATTTAAATTCTAATATAGAAATACATAAAT TCAAAAATACATTATGTCAATGAATTAACTCAAAACTC ATTTAAATTCTAATATAGAAATACATAAAT >NC_003454|7|3|1836377-1837401|PILER-CR ATTTAAATTCTAATATAGAAATACATAAAT TTCTATAAATTTCAAATGTCTTACTATCTTTCCAT ATTTAAATTCTAATATAGAAATACATAAAT TAAAAAACTCCTATCAGAAAAATTACCTTTTTTAAT ATTTAAATTCTAATATAGAAATACATAAAT GAAGTGCTTTTGTAGAATATTTAAAGTATTGAAAA ATTTAAATTCTAATATAGAAATACATAAAT CTTAGAACAAAGAGCAGAATTATTAAAAAATTCTC ATTTAAATTCTAATATAGAAATACATAAAT TTTATCAGAAGCTTTTGAATTACCAGTTGTAGTAT ATTTAAATTCTAATATAGAAATACATAAAT AAATTGAACAGGAAAATTTAAAAAATAAAGAAAAAA ATTTAAATTCTAATATAGAAATACATAAAT TTGCTCTGTATCTTTTATTAGCTTTGTTTTGTTGTTCC ATTTAAATTCTAATATAGAAATACATAAAT ATATAGTATGTATCATCAATTAAATACGCTTCTTC ATTTAAATTCTAATATAGAAATACATAAAT GAGAACTTACTACAAAGGTGGGAATCCAGTCAAAAAAAT ATTTAAATTCTAATATAGAAATACATAAAT AAGAGATTTTTTATTTGAATTAGCTAATGAAGCTAC ATTTAAATTCTAATATAGAAATACATAAAT TAGATTATTGACTTCATTTAATCCTGGAATAGTTAC ATTTAAATTCTAATATAGAAATACATAAAT TAAAAAACTTCTTTGAAATTATAACCACTGTCAGATTT ATTTAAATTCTAATATAGAAATACATAAAT GAATACTTGAATCTTTTAACTTAAACATCTGTAATACTT ATTTAAATTCTAATATAGAAATACATAAAT CTGTTGATTCAAATAATAAATTAGTTGGAAGTAG ATTTAAATTCTAATATAGAAATACATAAAT TCAAAAATACATTATGTCAATGAATTAACTCAAAACTC ATTTAAATTCTAATATAGAAATACATAAAT >NC_003454|7|5|1836377-1837401|CRISPRCasFinder ATTTAAATTCTAATATAGAAATACATAAAT TTCTATAAATTTCAAATGTCTTACTATCTTTCCAT ATTTAAATTCTAATATAGAAATACATAAAT TAAAAAACTCCTATCAGAAAAATTACCTTTTTTAAT ATTTAAATTCTAATATAGAAATACATAAAT GAAGTGCTTTTGTAGAATATTTAAAGTATTGAAAA ATTTAAATTCTAATATAGAAATACATAAAT CTTAGAACAAAGAGCAGAATTATTAAAAAATTCTC ATTTAAATTCTAATATAGAAATACATAAAT TTTATCAGAAGCTTTTGAATTACCAGTTGTAGTAT ATTTAAATTCTAATATAGAAATACATAAAT AAATTGAACAGGAAAATTTAAAAAATAAAGAAAAAA ATTTAAATTCTAATATAGAAATACATAAAT TTGCTCTGTATCTTTTATTAGCTTTGTTTTGTTGTTCC ATTTAAATTCTAATATAGAAATACATAAAT ATATAGTATGTATCATCAATTAAATACGCTTCTTC ATTTAAATTCTAATATAGAAATACATAAAT GAGAACTTACTACAAAGGTGGGAATCCAGTCAAAAAAAT ATTTAAATTCTAATATAGAAATACATAAAT AAGAGATTTTTTATTTGAATTAGCTAATGAAGCTAC ATTTAAATTCTAATATAGAAATACATAAAT TAGATTATTGACTTCATTTAATCCTGGAATAGTTAC ATTTAAATTCTAATATAGAAATACATAAAT TAAAAAACTTCTTTGAAATTATAACCACTGTCAGATTT ATTTAAATTCTAATATAGAAATACATAAAT GAATACTTGAATCTTTTAACTTAAACATCTGTAATACTT ATTTAAATTCTAATATAGAAATACATAAAT CTGTTGATTCAAATAATAAATTAGTTGGAAGTAG ATTTAAATTCTAATATAGAAATACATAAAT TCAAAAATACATTATGTCAATGAATTAACTCAAAACTC ATTTAAATTCTAATATAGAAATACATAAAT
>NC_003454.1|NP_604071.1|1835585_1835792_+|hypothetical-protein MTDIKYDSKDNMNPLNFYRAVKENRLPLSEKNINDFTNIKLKVSPKLINLLQESSIFYNFSPKKRNTN >NC_003454.1|NP_604070.1|1835400_1835589_+|hypothetical-protein MSVQGHSFLEVIIENRKIFKKLKLAQEVYDKNFLNKRVSYIYENKNEIKKFLITFKKHFFYI >NC_003454.1|NP_604069.1|1833701_1834715_-|phosphate-acetyltransferase MIIMSFLGQVRKKALQANRRIVLPESSDERIIRATSQILKEGLAQVVLVGNQEAIMHSAKAYEVSLSGAKIVDPYNFERLNDYINKLVELRAKKGMTPEEAKKILLNDPTFFGAMLVRMGDADGMVSGSASPTANVLRAAIQVIGTQPGVKTVSSVFIMELSQFKDLFGSILVFGDCSVIPFPTSEQLADIATSAAETAIKIAGINPRVALMTFSTKGSAKHECVDRVIEAGHILRERKVQFRFDAELQADAALVKSIGEIKAPLSDVSGNANVLIFPTLSAGNIGYKLVQRLAGANAYGPIIQGLNAPVNDLSRGCSVEDIVVLTAITSAQACIDC >NC_003454.1|NP_604068.1|1832454_1833651_-|acetate-kinase MKILVINCGSSSLKYQLINPETEEVFAKGLCERIGIDGSKLEYEVVAKDFEKKLETPMPSHKEALELVISHLTDKEIGVIASVDEVDAIGHRVVHGGEEFAQSVLINDAVLKAIEANNDLAPLHNPANLMGIRTCMELMPGKKNVAVFDTAFHQTMKPEAFMYPLPYEDYKELKVRKYGFHGTSHLYVSGIMREIMGNPEHSKIIVCHLGNGASITAVKDGKSVDTSMGLTPLQGLMMGTRCGDIDPAAVLFVKNKRGLTDAQMDDRMNKKSGILGLFGKSSDCRDLENAVVEGDERAILAESVSMHRLRSYIGAYAAIMGGVDAICFTGGIGENSSMTREKALEGLEFLGVELDKEINSVRKKGNVKLSKDSSKVLIYKIPTNEELVIARDTFRLAK >NC_003454.1|NP_604067.1|1828796_1832363_-|pyruvate-flavodoxin-oxidoreductase MAKKMQTMDGNQAAAYASYAFTEVAGIYPITPSSPMAEYTDEWAAKGMKNIFGVPVKLVEMQSEGGAAGTVHGSLQAGALTTTYTASQGLLLKIPNMYKIAGELLPGVIHVSARSLSAQALSIFGDHQDIYAARQTGFAMLATNSVQEVMDLAGVAHLSALKSRVPFLHFFDGFRTSHEIQKVEVMDYEDLKKLVDWKALEGFRKRALNPEHPVTRGTAQNDDIYFQAREVQNKFYDAVPDIVADYMKEISKITGREYKPFNYYGAPDAERVIIAMGSVCEAAQEVIDYLVEKGEKVGLISVHLFRPFSAKYFFDILPKTAKRISVLDRTKEPGSLGEPLLLDIKALFYNKENAPLIVGGRYGLSSKDTTPAQIKAVFDNLAKDTPKDAFTVGIVDDVTHTSLEVGPAMALADPTTKACLFYGLGADGTVGANKNSIKIIGDKTDLYAQGYFAYDSKKSGGVTRSHLRFGKKPIRSTYLVSRPTFVACSVPAYLNQYDMTSGLKEGGKFLLNCVWTKEEAIANIPNNVKRDLAKNKARLFIINATALAQEIGLGQRTNTIMQAAFFKLAEIIPFEEAQQYMKDYAKKSYAKKGDEIVQLNYNAIDRGANDIIEIEVDPAWANLEVTPLNEPKETTGCAYCQPDTEFVKKIVRPVNAIKGYDLPVSAFLGYEDGTFENGTSAFEKRGVAVDVPIWNVDKCIQCNQCSYVCPHAAIRPFLINEDELKAAPNSFATKKATGKGLDELVYRIQVSALDCVGCGSCANVCPANALDMRPIAESLETHEDINTNYLYNNVEYRSNLMPLDTVKGSQFSQPLFEFHGACPGCGETPYIKLITQLYGDRMMVANATGCSSIYSGSAPATPYTTNKNGEGPSWGSSLFEDNAEYGFGMHVGVEALRFRIQHTMEENMDKVDEDIATLFKDWIANRQYSVRTREVRDILVPKLEALGTDFAKEILDLKQYLVKKSQWIIGGDGWAYDIGYGGLDHVLASNEDINVLVMDTEVYSNTGGQASKATPTGSVAKFAAAGKPVKKKDLAAIAMSYGHIYVAQVSMGANQQQFIKAVKEAEAHQGPSIIIAYSPCINHGIKKGMSKSQTEMKLATECGYWPIFRYNPSLEKIGKNPLQIDSKEPKWEKYEEYLTGEVRYQTLAKSNPEEAKNLFETNKKDAQKRWRQYKRMAALDYSEEKEAE >NC_003454.1|NP_604066.1|1827669_1828626_-|L-lactate-dehydrogenase MLQTRKVGIVGIGHVGSHCALSMLLQGVCDEMVLMDIIPEKAKAHAIDCMDTISFLPHRAIIRDGGIQELSKMDVIVISVGSLTKNEQRLEELKGSLEAIKSFVPDVVKAGFNGIFVTITNPVDIVTYFVRELSGFPKNRVIGTGTGLDSARLKRILSEVTNIDSQVIQAYMLGEHGDTQIANFSSATIQGVPFLDYMKTHPEQFKGVELSVLEKQVVRTAWDIISGKNCTEFGIGCTCSNLVKAIFHNERRVLPCSAYLNGEYGHSGFYTGVPAIIGSNGVEEILELPLDERERKGFEDACAVMKKYIEVGKSYKIV >NC_003454.1|NP_604065.1|1826740_1827649_-|macrolide-efflux-protein MQSKESNIKLLLLGRVVSLFGNTIYLIVLPLYILNITQNLKTTGIFFASINLPTIIISPLIGTLIEKFNKKNIILICDFLTSMLYFIPFLYFKNSNSVIFLLIVSLILNIISKFFEIASKVLFSEINTPETLEKYNGLQSFLENAVMIFGPVVGTYLFATFTFNFVLIIISLAYFLSFLQELFIKYEKNTNLSKEKSSFFKDFKEGISYIKSKKIIFNFFILAMFLNFFIANNDEIINPGILIKKYQISEKLFGFSVACYGLGSVVAGYLSSYIGADVTYIIDNVAIIIIVFLVFKNIERDC >NC_003454.1|NP_604064.1|1825677_1826697_+|beta-methylgalactoside-transporter-inner-membrane-component MIARTNEGKIDYKKIIIESGLYLVLFCMLVAIIIKEPTFLSLRNFKNILTQSSVRTIIALGVAGLIVTQGTDLSAGRQVGLSAVISGTLLQSMTNVNKAFPKLGEFSIFTTILIVVVVGVVIASINGVVVATLNVHPFIATMGTMTIVYGINSLYYDKAGAAPISGFVEKYSKFAQGYIKIGSYTIPYLIIYAAIATLIMWTLWNKTKFGKNVFAVGGNPEAAKVSGVNVVLTLMGIYALSGAYYAFGGFLEAGRIGSATNNLGFMYEMDAIAACVIGGVSFYGGVGRISGVITGVIILTIINYGLTYTGVSPYWQYIIKGIIIVTAVAFDSIKYAKKK >NC_003454.1|NP_604063.1|1824152_1825655_+|galactose/methyl-galaxtoside-transporter-ATP-binding-protein MENLKYVLEMENISKEFPGVKALDDVQLKLKPGTVHALMGENGAGKSTLMKCLFGIYEKNSGKILLDGVEVNFKSTKEALENGVSMVHQELNQVLQRNVLDNIWLGRYPMKGFFVDEKKMYNDTINIFKDLDIKVDPRKKVADLPIAERQMIEIAKAVSYKSKVIVMDEPTSSLTEKEVDHLFRIIKKLKESGVGIIYISHKMEEIKMISDEITILRDGKWISTNDVSKISTEQIISMMVGRDLTERFPKKDNKAKEMILEVKNLTALNQPSIQDVSFELYKGEILGIAGLVGSKRTEIVETIFGMRPKKHGEIILNGKTVKNKSPEDAIKNGFALVTEERRSTGIFSMLDVAFNSVISNLDRYKNKFRLLKNKDIEKDTKWIVDSMRVKTPSYSTKIGSLSGGNQQKVIIGRWLLTEPEVLMLDEPTRGIDVLAKYEIYQLMIDLAKKDKGIIMISSEMPELLGVTDRILVMSNGRVAGIVKTSETNQEEIMELSAKYL >NC_003454.1|NP_604062.1|1823037_1824063_+|D-galactose-binding-protein MKKFGMLLGSIILASALVACGEKKEEAKTDAPATEKLSIGLTAYKFDDNFIALFRKAFEAEAAAKADIVAVTAIDSQNSVATEKEQIEAVLEKGVKAFAINLVDASAADGIINLLKEKDVPVVFYNRKPSDEAIASYDKLFYVGIDPNAQGIAQGELIEKLWKENPDLDLNKDGVIQYVMLTGEPGHPDAVARTKYSISTLNDHGVKTEELHQDTAMWDTATAKDKMDAWLSGPNGSKIEVVICNNDGMALGAVESMKAAGKVLPTFGVDALPEALVKIEAGEMAGTVLNDAKGQASATFNMVVNLAQGKEATEGTDLKLDNKIILIPSIGIDKSNVADFK >NC_003454.1|NP_604073.1|1837595_1837916_-|cytoplasmic-protein MKRNINLFKCGGDKMYVVVVYDISLDEKGSRNWRKIFGICKRYLHHIQNSVFEGELSEVDIQRLKYEVSKYIRDDLDSFIIFKSRNERWMEKEMLGLQEDKTDNFL >NC_003454.1|NP_604074.1|1837878_1838895_-|hypothetical-protein MFCIGGVNMKRSFFLYSNGTLKRKDNTITFINEKDEKRDIPIEMVDDFYVMSEMNFNTKFINYISQFGIPIHFFNYYTFYTGSFYPREMNISGQLLVKQVEHYTNEQKRVEIAREFIEGASFNIYRNLRYYNGRGKDLKLYMDQIEELRKHLKEVNNVEELMGYEGNIRKIYYEAWNIIVNQEIDFEKRVKNPPDNMINSLISFVNTLFYTKVLGEIYKTQLNPTVSYLHQPSTRRFSLSLDISEVFKPLIVDRLIFSLLNKNQITEKSFVKDFEYLRLKEDVSKLIVQEFEDRLKQIITHKDLNRKISYQYLVRLECYKLIKHLLGEKKYKSFQMWW >NC_003454.1|NP_604075.1|1838882_1839377_-|cytoplasmic-protein MDKNITGLMVYYYEVCKRKLWYFVNEIQLEENNSNVILGKLLEENTYTRDEKKINIDGIINIDFIRSKKVLHEIKKSNSIEPASLLQVQYYLYYLEKKGLIGLKGILDYPLLKQTVEVNLTDKDRENLDNIIIGIKEILRKESPPALEKKSICKKCAYFDLCFV >NC_003454.1|NP_604076.1|1839419_1841858_-|ATP-dependent-RNA-helicase MLDEELLKKYKAKSNKSIFEHNQDLKKQKDVLINLGYLNDKEKIELLSYAIDYHDSGKFNLKFQRRIEENIKRINGEKYNSKYLKFDKENEIEHNILSAFLINSQDFNSEKEYLAVLYSVIFHHRYSDAISTINNQIFPNIEEILEDNLPNGVVTYEGDIPLELNFQDLNTVENIKLLGLLMKCDHSASGGYEIEYPNDFLEEALNNLLNEFKEKDKSADWNDMQKFCKENSDKNIIAIADTGMGKTEGGFLWGGNNKIFFVLPLRTAINAMYKRVKLFVPKNKILEEKVGLLHSNSLEYYLNNKKELVIDDKDEKEMDILEYNKRGKHLSLPVTICTPDQIFNFILKYKGYESKLATLSYSKIILDEMQMYDASLLAAVIFGITKIIEMGGKIAIVTATFPPIIEYFLNKYLMKGNKKAIKDLDKPEEVVEEPIFIKKKFTNNEKIRHNIVLIDDEIGVEQILWKFRKNRKENKKSNKILVICNTIKKAQEIYLKLKEEDDLKDKINMLHSNFIREDRENKEKEILDFGKTEFDGEGIWISTSLVEASLDIDFDYLFTELQDLNSLFQRFGRCNRKGKKLVDEANCFIYLKIEDKYLKEKGSKYGFIDKDIYENSKKGLENYYEVVSKDEIENSQDYSELFKNYSKQINEGDKIKLIEENLSFENLKESNFVDEFEKAYEKYQRILNSDENSQDALKLRDIQSVTVIPYDIYEENEENIKELIKKIEDKNLGLEERQNAKTELLKKTLSIQYYQLSKYISEILKGKADANKYKSESINKFEKITVMEADYDKELGFRAKDFKDGIPTYEFI >NC_003454.1|NP_604077.2|1841946_1843047_-|CRISPR-associated-protein-Cas5 MEALRIILKQSSANYRKAGTVDNKMTYPLPIPSTIIGALHNICEYTEYHSMDISIQGKFTSLSKRVYTDYCFLNSALDDRGNLVKVVDPDTFSGAFVKVASAKKSQGNSFKDRITIQVHNEELLQEYCSLKEKSKEIEELKNSEYKKKLEEFKALKKEIADKKKKEDKKLETFKQLSEEEKKVKLEEEKYKEDFKKFEYESYTKPYSYFQNLVTSLKNYEILNDIFLILHIKANKQTLKDIEENIYNLQSLGRSEDFVEVVECKMVELQEFSRNIRVSKFSMYLKNEDVSDKKIIPLAVDQDHQAGGTKYYLDKNYKLEKNRRIFKKVPVIYSNFIGAKNSSENVKLDYLEILSQDKKQEILVNFL >NC_003454.1|NP_604078.1|1843059_1843962_-|hypothetical-protein MKKNALTITVVANMTSNYSEGLGNISSVQKIYRDRNVYAIRSRESLKNAIMVQSGMYEDLETEANGATQKKVDENLNATNCRALEGGYMNTKENTYVRNSSFYLTDAISTESFINETRFHNNLYLATNYANTHTDKNGKTLNVQKDAGEVGLMPYQYEYEKSLKVYSLTIDLEKIGKDPNFPNKEANNNEKFERVKSLLEAVENLSLVVKGNLDNAEPVFAIGGLSLRKTHYFENVVRVEQGALILGEALKEKKEDGFSCALLKGDIFTNEVEIIKELQPISMREFFKSLIEDVKNYYGA >NC_003454.1|NP_604079.1|1843974_1845528_-|hypothetical-protein MKYDIDKNEYSFDTAISASDWKYSAAITGLIYYFKELEKKYEIKKITIDEITDSYLLYNKEDINEENYLDFIEKFYSKYSEDTLAHKKLENQLKHTKEFTSEIIKSIKENMSANTVLKKVFSKTKFDGTNKDEVLKLLDENRHSIIKETFRNKKDLYDNYCQTSRLLEKGDNSPCRLKGYYFDPNRKSKATGYNFVSSSVDYFDDEIFDFIPFAFTGSSFETIFLNDNLDLEILENMNYKLREYFSEEKENETERLKSLKQEKAIKEKKNEETEGNQNSVPLKKLFLNILQKKVDYIKYGMEIIYKNRDKEYFETWYLRNESIKVLKEIEDFSKLDIRIKITDKYYFNLLDEVFSAVLNLSLLTNSILYLLKDRESFIKIDTTRENLSKLFKYNYAINELIKVNQIIRNGGKEMDENLKKSIKACSIAVVKKFIKENSLNKLASYRQKLLSSVVAKNHKRILDVLTQLSVYSGVYFSFAFDYIENQTQNEDIIHYFILELDQSRLESKKNKENEDKE >NC_003454.1|NP_604080.1|1845517_1846270_-|cytoplasmic-protein MRFILNFELDTVIIPVEIKRTIISFFKKSLTEAHNSKYYPEFFTGTQIKDYSFSVIFPLDKYFGEEIYLKRPEMKVLVSCSEKNNIGFLLVNVFLSQRNKKFPLPKDTHMILKDVRIIEEKIIKEEEAVFQTTIGGGVVVREHNKEENKDIYYSVGNERFEEVLNWLMKERFKRLRYPEDIFKDFSCELLEGRKIVVKHFDLKFPVTTGRFKVKAPKILLEEIYRTGMGSRLSQGFGLLEYLGGEIKDEV >NC_003454.1|NP_604081.1|1846297_1847197_-|hypothetical-protein MSYSEIHLSYEAQLNRFISRGMLVKNRTKALERLKHISYYKIKQFSTFFMDNSGNYKQNTSFEAVIQNFYFDKNLRMEFLKCSEKIELSIKNKIAYLLGVKYGAFGYLNFSSWCDRTRPKQEIQNEESKFKKKIQNKMKLFSDNSIIKDFVINNPTETYLSIWRLSEVLTFGEALYLFEMMSQKNKVSIARTYNLKVDEFTSYVNNIKLVRNLCAHNMSIIHLKLRTIPKMNTDFSNILNRYDRIFSSILIIIYFIKNINPNYQFKTLYHTVCQLIKRNKVAKIYGIKNYKLLKKYIKS >NC_003454.1|NP_604082.1|1847652_1848411_-|NAD-dependent-deacetylase MDSKRDEKILELVKILKNTKYLVFFGGAGTSTDSGVKDFRGKDGLYKTLYKDKYRPEEVLSSDFFYSHRDIFMKYVEKELNIKGLKPNKGHMALVELEKIGILKAVITQNIDDLHQVSGNKNVLELHGSLKRWYCLSCGKTADRNFSCECGGVVRPDVTLYGENLNQSVVNEAIYQLEQADTLIVAGTSLTVYPAAYYLRYFRGKNLIIINDMDTQYDGEASLVIKDNFSYVMDRVVKELKKIQFGKTLKNI |
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CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
---|
CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
---|---|---|---|---|---|---|---|---|
NC_003454_1 | 1.1|3953|24|NC_003454|CRT | 3953-3976 | 24 | MN582102 | Siphoviridae sp. cttb18, complete genome | 25841-25864 | 3 | 0.875 |
NC_003454_1 | 1.3|4037|24|NC_003454|CRT | 4037-4060 | 24 | NZ_CP011119 | Yersinia enterocolitica strain FORC_002 plasmid pFORC2, complete sequence | 90238-90261 | 3 | 0.875 |
NC_003454_1 | 1.3|4037|24|NC_003454|CRT | 4037-4060 | 24 | MH617083 | Microviridae sp. isolate ctca675, complete genome | 4027-4050 | 3 | 0.875 |
NC_003454_1 | 1.3|4037|24|NC_003454|CRT | 4037-4060 | 24 | NC_010377 | Yersinia enterocolitica plasmid pYE854, complete sequence | 5531-5554 | 3 | 0.875 |
NC_003454_1 | 1.5|4121|24|NC_003454|CRT | 4121-4144 | 24 | NZ_CP044456 | Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence | 16104-16127 | 3 | 0.875 |
NC_003454_1 | 1.5|4121|24|NC_003454|CRT | 4121-4144 | 24 | NZ_CP010107 | Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-1, complete sequence | 5562-5585 | 3 | 0.875 |
NC_003454_1 | 1.5|4121|24|NC_003454|CRT | 4121-4144 | 24 | NZ_CP039144 | Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence | 233788-233811 | 3 | 0.875 |
NC_003454_1 | 1.1|3953|24|NC_003454|CRT | 3953-3976 | 24 | NZ_AP022840 | Legionella sp. TUM19329 plasmid pTUM19329-1 | 117512-117535 | 4 | 0.833 |
NC_003454_1 | 1.1|3953|24|NC_003454|CRT | 3953-3976 | 24 | MW067003 | CrAssphage sp. C0531BW4, complete genome | 18695-18718 | 4 | 0.833 |
NC_003454_1 | 1.4|4079|24|NC_003454|CRT | 4079-4102 | 24 | NZ_CP033095 | Escherichia coli strain CP53 plasmid pCP53-92k, complete sequence | 67120-67143 | 4 | 0.833 |
NC_003454_1 | 1.5|4121|24|NC_003454|CRT | 4121-4144 | 24 | NZ_CP045610 | Bacillus cereus strain SB1 plasmid p4, complete sequence | 3150-3173 | 4 | 0.833 |
NC_003454_7 | 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836733-1836768 | 36 | NC_015910 | Borreliella bissettii DN127 plasmid cp32-7, complete sequence | 27130-27165 | 7 | 0.806 |
NC_003454_7 | 7.5|1836603|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836603-1836637 | 35 | MN856077 | Bacteriophage sp. isolate 40, complete genome | 17008-17042 | 8 | 0.771 |
NC_003454_7 | 7.1|1836340|37|NC_003454|CRT | 1836340-1836376 | 37 | MN693910 | Marine virus AFVG_250M312, complete genome | 27629-27665 | 9 | 0.757 |
NC_003454_7 | 7.5|1836603|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836603-1836637 | 35 | MT375521 | Pelagibacter phage Eistla EXVC0, complete genome | 35335-35369 | 9 | 0.743 |
NC_003454_7 | 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836733-1836768 | 36 | NZ_CP028373 | Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence | 81515-81550 | 9 | 0.75 |
NC_003454_7 | 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836733-1836768 | 36 | NZ_CP014745 | Campylobacter jejuni strain OD267 plasmid pCJDM67 L, complete sequence | 5944-5979 | 9 | 0.75 |
NC_003454_7 | 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836733-1836768 | 36 | NZ_CP014345 | Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence | 64575-64610 | 9 | 0.75 |
NC_003454_7 | 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836733-1836768 | 36 | NZ_CP014743 | Campylobacter jejuni strain WP2202 plasmid pCJDM202, complete sequence | 5944-5979 | 9 | 0.75 |
NC_003454_7 | 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836733-1836768 | 36 | NZ_CP017417 | Campylobacter jejuni strain MTVDSCj13 plasmid pMTVDSCj13-2, complete sequence | 37373-37408 | 9 | 0.75 |
NC_003454_7 | 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836733-1836768 | 36 | NZ_CP044174 | Campylobacter jejuni strain AR-0412 plasmid pAR-0412, complete sequence | 19519-19554 | 9 | 0.75 |
NC_003454_7 | 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836733-1836768 | 36 | NZ_CP044176 | Campylobacter coli strain AR-0411 plasmid pAR-0411, complete sequence | 76297-76332 | 9 | 0.75 |
NC_003454_7 | 7.15|1837270|34|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1837270-1837303 | 34 | NC_019529 | Vibrio phage pVp-1, complete genome | 35918-35951 | 9 | 0.735 |
NC_003454_7 | 7.4|1836538|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836538-1836572 | 35 | NZ_CP047445 | Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-8 | 11397-11431 | 10 | 0.714 |
NC_003454_7 | 7.4|1836538|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder | 1836538-1836572 | 35 | NZ_CP047429 | Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence | 90085-90119 | 10 | 0.714 |
NC_003454_2 | 2.2|461452|59|NC_003454|PILER-CR | 461452-461510 | 59 | NC_014633 | Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence | 245267-245325 | 13 | 0.78 |
NC_003454_2 | 2.2|461452|59|NC_003454|PILER-CR | 461452-461510 | 59 | NC_014633 | Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence | 245800-245858 | 15 | 0.746 |
NC_003454_2 | 2.2|461452|59|NC_003454|PILER-CR | 461452-461510 | 59 | NC_014633 | Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence | 919928-919986 | 15 | 0.746 |
1. spacer 1.1|3953|24|NC_003454|CRT matches to MN582102 (Siphoviridae sp. cttb18, complete genome) position: , mismatch: 3, identity: 0.875
atgataataaagccattgaaaagg CRISPR spacer ttgataataaagccattgatacgg Protospacer ****************** * **
2. spacer 1.3|4037|24|NC_003454|CRT matches to NZ_CP011119 (Yersinia enterocolitica strain FORC_002 plasmid pFORC2, complete sequence) position: , mismatch: 3, identity: 0.875
ttcataatatagccagtaaaatac CRISPR spacer ttcaaaataaagccagtaaaataa Protospacer **** **** *************
3. spacer 1.3|4037|24|NC_003454|CRT matches to MH617083 (Microviridae sp. isolate ctca675, complete genome) position: , mismatch: 3, identity: 0.875
ttcataatatagccagtaaaatac CRISPR spacer ttcataatatagccagaaacataa Protospacer **************** ** ***
4. spacer 1.3|4037|24|NC_003454|CRT matches to NC_010377 (Yersinia enterocolitica plasmid pYE854, complete sequence) position: , mismatch: 3, identity: 0.875
ttcataatatagccagtaaaatac CRISPR spacer ttcaaaataaagccagtaaaataa Protospacer **** **** *************
5. spacer 1.5|4121|24|NC_003454|CRT matches to NZ_CP044456 (Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence) position: , mismatch: 3, identity: 0.875
ttaaaaatacagttagtggattta CRISPR spacer tgaaaaatacagttagtgtatttt Protospacer * **************** ****
6. spacer 1.5|4121|24|NC_003454|CRT matches to NZ_CP010107 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-1, complete sequence) position: , mismatch: 3, identity: 0.875
ttaaaaatacagttagtggattta CRISPR spacer gtaaaaatacagttagtagattaa Protospacer ****************.**** *
7. spacer 1.5|4121|24|NC_003454|CRT matches to NZ_CP039144 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence) position: , mismatch: 3, identity: 0.875
ttaaaaatacagttagtggattta CRISPR spacer tgaaaaatacagttagtgtatttt Protospacer * **************** ****
8. spacer 1.1|3953|24|NC_003454|CRT matches to NZ_AP022840 (Legionella sp. TUM19329 plasmid pTUM19329-1) position: , mismatch: 4, identity: 0.833
atgataataaagccattgaaaagg CRISPR spacer ttgataataatgccattgaaaaca Protospacer ********* *********** .
9. spacer 1.1|3953|24|NC_003454|CRT matches to MW067003 (CrAssphage sp. C0531BW4, complete genome) position: , mismatch: 4, identity: 0.833
atgataataaagccattgaaaagg CRISPR spacer atgataataaagctattgaaacta Protospacer *************.******* .
10. spacer 1.4|4079|24|NC_003454|CRT matches to NZ_CP033095 (Escherichia coli strain CP53 plasmid pCP53-92k, complete sequence) position: , mismatch: 4, identity: 0.833
gcaataatgcagctgatggggtaa CRISPR spacer atgataatgcagctgatggggaaa Protospacer ...****************** **
11. spacer 1.5|4121|24|NC_003454|CRT matches to NZ_CP045610 (Bacillus cereus strain SB1 plasmid p4, complete sequence) position: , mismatch: 4, identity: 0.833
ttaaaaatacagttagtggattta CRISPR spacer gtaaaaatacagttagtagattag Protospacer ****************.**** .
12. spacer 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NC_015910 (Borreliella bissettii DN127 plasmid cp32-7, complete sequence) position: , mismatch: 7, identity: 0.806
--aaattgaacaggaaaatttaaaaaataaagaaaaaa CRISPR spacer aagaattaa--aggaaaaattaaaagataaagaaaaat Protospacer .****.* ******* ******.***********
13. spacer 7.5|1836603|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to MN856077 (Bacteriophage sp. isolate 40, complete genome) position: , mismatch: 8, identity: 0.771
cttagaacaaagagcagaattattaaaaaattctc CRISPR spacer tatgaaacaaagagaagaattattaaaaaagcatc Protospacer . *..********* *************** . **
14. spacer 7.1|1836340|37|NC_003454|CRT matches to MN693910 (Marine virus AFVG_250M312, complete genome) position: , mismatch: 9, identity: 0.757
ttattctttccctgcaatcatttatatcttgttcgat CRISPR spacer catatttttccctgaaatcatttatatcttcttctct Protospacer . *.******** *************** *** *
15. spacer 7.5|1836603|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to MT375521 (Pelagibacter phage Eistla EXVC0, complete genome) position: , mismatch: 9, identity: 0.743
cttagaacaaagagcagaattattaaaaaattctc CRISPR spacer cattaaacaaagagctaaattattaaaaaataaag Protospacer * * .********** .**************
16. spacer 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP028373 (Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75
aaattgaacaggaaaatttaaaaaataaagaaaaaa CRISPR spacer ggtttttaagggcaaatttaaaaaatcaagaaaaaa Protospacer .. ** * .** ************* *********
17. spacer 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014745 (Campylobacter jejuni strain OD267 plasmid pCJDM67 L, complete sequence) position: , mismatch: 9, identity: 0.75
aaattgaacaggaaaatttaaaaaataaagaaaaaa CRISPR spacer ggtttttaagggcaaatttaaaaaatcaagaaaaaa Protospacer .. ** * .** ************* *********
18. spacer 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014345 (Campylobacter jejuni strain RM3194 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.75
aaattgaacaggaaaatttaaaaaataaagaaaaaa CRISPR spacer ggtttttaagggcaaatttaaaaaatcaagaaaaaa Protospacer .. ** * .** ************* *********
19. spacer 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014743 (Campylobacter jejuni strain WP2202 plasmid pCJDM202, complete sequence) position: , mismatch: 9, identity: 0.75
aaattgaacaggaaaatttaaaaaataaagaaaaaa CRISPR spacer ggtttttaagggcaaatttaaaaaatcaagaaaaaa Protospacer .. ** * .** ************* *********
20. spacer 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017417 (Campylobacter jejuni strain MTVDSCj13 plasmid pMTVDSCj13-2, complete sequence) position: , mismatch: 9, identity: 0.75
aaattgaacaggaaaatttaaaaaataaagaaaaaa CRISPR spacer ggtttttaagggcaaatttaaaaaatcaagaaaaaa Protospacer .. ** * .** ************* *********
21. spacer 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP044174 (Campylobacter jejuni strain AR-0412 plasmid pAR-0412, complete sequence) position: , mismatch: 9, identity: 0.75
aaattgaacaggaaaatttaaaaaataaagaaaaaa CRISPR spacer ggtttttaagggcaaatttaaaaaatcaagaaaaaa Protospacer .. ** * .** ************* *********
22. spacer 7.7|1836733|36|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP044176 (Campylobacter coli strain AR-0411 plasmid pAR-0411, complete sequence) position: , mismatch: 9, identity: 0.75
aaattgaacaggaaaatttaaaaaataaagaaaaaa CRISPR spacer ggtttttaagggcaaatttaaaaaatcaagaaaaaa Protospacer .. ** * .** ************* *********
23. spacer 7.15|1837270|34|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NC_019529 (Vibrio phage pVp-1, complete genome) position: , mismatch: 9, identity: 0.735
ctgttgattcaaataataaattagttggaagtag CRISPR spacer ctcacgtttcaaataataaagtagttggcaggct Protospacer ** .* ************* ******* **
24. spacer 7.4|1836538|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047445 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-8) position: , mismatch: 10, identity: 0.714
gaagtgcttttgtagaatatttaaagtattgaaaa CRISPR spacer atcttgctcttgtaaaatatttaaagtattaactt Protospacer . ****.*****.***************.*
25. spacer 7.4|1836538|35|NC_003454|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 10, identity: 0.714
gaagtgcttttgtagaatatttaaagtattgaaaa CRISPR spacer atcttgctcttgtaaaatatttaaagtattaactt Protospacer . ****.*****.***************.*
26. spacer 2.2|461452|59|NC_003454|PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 13, identity: 0.78
-----cggtcaccatattattctggagcgggaaacgaggttcgaactcgcgacattcagc CRISPR spacer aactacgctcaccacat-----tggagcgggaaaccaggttcgaactggcgacattcagc Protospacer ** ******.** ************* *********** ************
27. spacer 2.2|461452|59|NC_003454|PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 15, identity: 0.746
cggtcaccatattattctggagcgggaaacgaggttcgaactcgcgacattcagcttgg CRISPR spacer ggacgaacggggcttattggagcgggaaaccaggttcgaactggcgacattcagcttgg Protospacer *.. * *. . . * .************* *********** ****************
28. spacer 2.2|461452|59|NC_003454|PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 15, identity: 0.746
cggtcaccatattattctggagcgggaaacgaggttcgaactcgcgacattcagcttgg CRISPR spacer ggacgaacggggcttattggagcgggaaaccaggttcgaactggcgacattcagcttgg Protospacer *.. * *. . . * .************* *********** ****************
Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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DBSCAN-SWA_1 |
153277 : 174314
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NC_003454|153277:174314|DBSCAN-SWA ATTAATATATTCTCATTAATTCTTTAATTTTGGCAATAACTTCATTTTGAGAAACCTCAAGAGTTTCTCCTGTTCTTCTAATTTTTAATTCAACTATGCCTTCATCAGCTCTTTTTCCAACAACAACTTTAAATGGAAAACCAATTAAGTCTGCATCTTTAAATTTGAAACCAGGTTTTTCATCTCTATCATCTAACATTACATCAATTTTTTCTTCTTGTAGCTCATTATAAATCTTTTCAGCTAAACTTACTTGTACTTCATTTTTTATATTTGCTGGAATTACATCAACAATATAAGGTGCTATTGATACTGGCCAAATAATTCCATTTTCATCATTATTTTGTTCTATTGAAGCTGCCATAGTTCTTGTAACTCCTATCCCATAGCAACCCATTAACATAAATTGAGTTTTACCTTTTTCATCAAGGTAAGTAGCATTCATAGCCTTAGAATATTTATCTCCAAGTTTAAATATTTGACCACATTCAATTCCCCTTGCTGAATGTAATTTACCCCCTGTTATACAATTGTCCCCAACTCTAACTTTTCTTATATCTGTCACTATATCAGCAGTATAATCTCTATCATAGTTTACATTTTTGTAGTGGTAATCTTTTTGATGAGAACCAACAATATGATTTGAAACTTCTGGTACAGATAAGTCTGCTACAATTTTAATTTTAGCAGGTAATTTATATGGTCCAATATATCCTTTTTTCAAACCTATTTTTTCTATTTCTTCATCAGTAGCCATTTCAACTTCCACTGCATTTAAAATATTTTTTAACTTTACTTCGTTAACTTCAAAATCTCCTCTTATTAGAACCATATAAATTTCATCTGTTCCCATATCTTTATATGTCAATGCTTTTACAGTTCTTTCCAATGGAACATCTAAATATTTTGCTAAACTTTCTATTGTTGGACAATCTGGTGTATGAACAAGTTCAACTTCCTTTAATTCTTCCTTTGGAGGATTGATAAGTTCACTTACAGCTTTTTCAATATTTGCTGCATATTCTGAACCATCAGAGTAAATAATTTCATCTTCTCCTGATTCTGCCAATACTTGAAATTCTTGAGAACCACTTCCACCAATATTTCCTGAGTCTGCATCAACAGGTCTAAATTTTAAACCACATCTTGTAAATATTCTTGTATAAGTATCTCTCATATTTAAAAATTCTTCATCTAATGATTCTTGAGAAGTATGGAAAGAATAAGCATCTTTCATAGTAAACTCTCTACCTCTCATAAGTCCAAATCTTGGTCTTCTTTCATCTCTAAACTTTGTTTGAATATGATATAGATTTATAGGTAGTGACTTATATGAAGAAATATCACTTCTAATTATTGCTGTTATCATTTCTTCTTGTGTAGGAGATAGAACAAAATCTCTTTCATGTCTATCTTTTAATCTTAACATTTCAGGTCCCATAACATCCCATCTTCCACTTTCTTGCCAAAGTTCAGCTGGTTGAACAACTGGCATTAAAAGTTCCAATGCACCTGCTCTATCCATTTCTTCACGAACAATATTTTCTATTTTTTTAATAGTTCTATATCCTAATGGTAAATAAGCATAGATACCACTTGCTAATTTTTTTATCATACCTGCTCTTAACATAAGTTTATGGCTGGCAATTTCTGCTTCTTTTGGTGTTTCTTTTAAAGTTTTTATATATGCTTTACTAAACCTCATTTTTTCCCTCCAATTAATTTTAATTAAAATTTACCTAATAATTCTAACATAAATCATATACTTTTCCAACTAAAATATTTAATTATATCATATTCTATATCCCAATCTTCTTGTAATTATTTTTTAACAGAAAACCTTTATATTATTTAAAAAAGATGATAAAATTGAAGTATAAATAAAATACATTAAAGGAGATGGTTATTATGAAAAAAATATTTTATTTTATTCTTTTTTTTAGCATTTTATTTAATTTATCTTTGCTTTCTTATTCTTTTCAAAATCGCGAAAAAAATATCTTTTATATAAAAAATATAGAAAATTTTCATACTCTTGATATAATGGAAAATTCTATTAGTAAACAAATTCCAAACTCCTCTCATTTAATAGAATTAGAAAAAGATTCATCAAAAGTGGAAAATGATAATGTTGAGTTTGCTCAAAGTATTTTTAGGTTACTCATTATTTTTTCCATTTTTGTTCCATTTTCTTTTACAGGTTTATTTTTGATTATTTATTTAGTGATCGAAGGATTTAAACATTGCAGATGTAGAAATTCTTCACTAGAAGACTTAGAGAATATAACCTCTAACAATAGTTTTTGCTATACTTTTATTTTAAATTTAAATGTATATGATGTTCTTTTTCATTTTATATTAGCTATTATAAATTTTTGTTTTACTTTATATTTAATGCATACAGGTACCCTTCCAATTAACTTAAACTTAACTTTTTTATACTATTTATTTTTTGTTTTTAAAAATATATTTAAATTAGATAATAAGACTGCTTTTATATCTTCTTTTGCTATTATTATATTTTTAACTATAATATCATTAGGTATATTTAACTTGACATATTTTTTGGATTTAATAAAAATGTTACCTAACTTAAAGTTATCTTCTTAAATTTTTATTAAAATAAGGTTATTATTTTATAATAACCTTATTTTAATTTCCTGCTTGAATATCAGAGAATTTTTGCTCTATATCATATTTTAGATAGATATTATCTATCTCTCCCTTGTGTTCTTTTAAATATTTTATACATTCATCTCTAACAAGTTTTATAGTTTTAACATCATAGATAATATCTATAAATTTTAAATCACTAAATCCACTTTGTCTTAAACCAAAAATTTCTCCTGAATTTCTAAGTTTTAAATCTTCCTCTGCTATTCTAAAACCATCTTCTGTTTCTTCCATAATAGACAGTCTCTGTTTTGAATTTTCTGTTGTTGAATTAGAAATTAAAAAACAATATGACTGTTTTGAGCCTCTACCAACTCTACCTCTCAATTGATGTAATGCTGACAGTCCAAATCTTTCAGCATTATAGATAGTCATTATTGTTGAAGCAGGAACATCTATACCAACTTCAATAACTGTTGTTGCTATTAAAATATCATATTCCTTATTTTTAAATTTAAGCATAACTTCATCTTTTTCTTTGGCTTTCATCTTACCATGGATTATTCCAATTTTTTTATTAGAGAATTTTCTCTCAATCTCCTCTGAAACCTTATCCACAGATTTTAATGCCATCTTATCACTTGTTTCAATTAAAGGTGCAACAAAGTATGCTTGATTTCCATCATTTACCTTCTTATAGATAAAATTATACATCTTTTCTAAATCTTCATCATTGGCTATCCACTTAGTTTTTATAGGAGTTCTTCCAGGTGGTAATTCATCTATTATTGATAAGTCTAAATCCCCATAGATACTCAAAGCCAATGAACGAGGAATAGGAGTGGCACTCATAACTAAAAGATTTCCTAAAAATCCCTTTTCTCTTAACTTATTTCTTTGATTAACTCCAAATCTATGCTGCTCATCTATCACTATAAGCCCTAACTTTTTGAAAATTACATCATCTTCTATCAAAGAGTGAGTTCCTATAACTATATCTATATCCCCATTTGCAATACCATCTAATATTTCATTTTTTTTCTTTCCTTTAATACTAGAAGTCAACAATTCCACTCTTAAACCTATTTGTTCCAATCTTTCTTTTATTCCAAGATAATGCTGATTAGCCAAAATTTCAGTTGGTGCCATCAATGCTCCTTGATAACCATTCTCCGCCATATATATAAGCATAACCATTGCAACAACTGTTTTTCCACTTCCAACATCACCCTGAATTAGTCTATTTACAATTTTTCCATTTGAAATTTCATCATAGATTTCTTTTATAACTTTCTTCTGAGCATTGGTTAGGTTAAAAGTTAATTGTGATAAAAACTCCCTTACTTTTTCTTTTTTCCCTTCAACCTCATAATTTTTACTATTTGAATTTTCAATTATAAATCTATTTTTAAGTATTCCTAATTCTAAAATCAATAATTCTTCTATTGCAAATCTTCTCTTTGCTTCCTCTATTTCTTTCATAGATACAGGGTAATGTATATTTTTAATAGCACTTTTTCTTTCCATTATCTTGTATTCTTTTATTAATTTTTTAGGAATATTCTCTTCAAAATAATTTAAGAAATTCACTAAAAACTTTTCTACTAATTTTCTTAAACTATTTTGTGTGATATTTTTATTGGAACTATATATTGGTAAAATTTCATTTTCAGACACTTTTTGTTGTCCAGAAAATAATTTATATTCTGGATTGATAAGCTGAAAAACAGCAGACTTTTTAGTCTGCCCTATAAATAAATATTCTTCTCCTATTTTTAAAGATTTCTTAATATAAGGCATACCAAACCATAGTATCTCCATTATCCCTGTTCCATCAGTTACCATAGCTTTAACAATTTTTTTACCACTTCTCACTGTTAAATTTACAGCTGACATCACTGTTGCCTTTAAAACAACATATTCATTGAATTTTAATTCTCCAATTTTTTTTATATTTGTCCTATCATCATAGGCTCTTGGAAAATAGTAAATTAAGTCATACACTGTGTTAATACCTAAGGATTTAAGATTTGATAGCTGTTTGGCTGTTATATATTTAGTTGGAATATCTTCTAATTTAGAATATATATTTCTATAACTCTCTATCATAATAACTCCTAATATTTTATAAAAAACTGTTGCAAATATTGCAACAGCCTGTTTTTAATCTAATTGTTCTAATATCTCATCTGGGATATCAAAGTTAGAGTAAACATTTTGTGAGTCATCTAAATCTTCTAAAGCATCATAAAGTGCCATAACTTTTTTAGCAGTTTCTAAATCTGTTATTTCAACTGTATTTTCAGGTATCATACTGATTTCTGCTTCTTCATATTGATAACCTGCATTCTTTAAATTTTCAAGAACAGTTTGAAATTCTGTATATTCAGTAGTTACTTCAAAATATCCATCATCTTCTGTAACATCCTCTGCTCCTGCTTCCAATGCAGCCATCATAAATTCATCAGCATCTATTCCTTCTGCTTTTACAGTTATTACTCCTTTTTTCTTAAACATCCAAGATACTGCTCCATCTGCTCCAAGATTTCCATCTTTACGAGTGAAAGTCATTCTCATTTCTGAAGCTGTTCTATTTTTATTATCAGTTACTGCTTCAACTATAAAGGCTGTTCCAGCAGGTCCATAACCTTCATATCTCATTTCTGTAAAATCTACACCCTCTAATTCTCCAGAACCTTTTTTTATTGCTCTTTCTAAGATATCTTTTGGCATATTTCCAGCTTTTGCTTTTTCTATTGCAAGTCTAAGTCTTGGGTTGAAGTTTGGATCTCCTCCACCTTCCTTAGCCGCTATTGTTAATTCTCTTCCAAATTTTGTGAATAGTTTAGCTCTTTTTTTATCTTGAGCTCCTTTTCTATGTTGTATATTATTCCATTTACTATGTCCAGACACAACAAACCTCCTATAATTTTTAATTTATAGTAAATTTTAACATATATATTAAATATATTCTAGTTTTAATTTTATTAAATTTTCACATACCATTCAAAGTACATTCGAAACTATTCGAATTTTTTTTTCTTTAATACCAATACTAGTTTTATATATTTTCGAAACCATTCGAAAACTTTTTATTCAGCCCAAAACGGTATATAACTCTTATTTGGACCTACTTTTATTAATTTCATATTCTTAGCTTTTTTTATTAAATTTGATATTCTATCAGTTGAAGGTTTTGAATTATCTAATAAAAATCTATTTCTTAAAGATGAATTGGTCATATAATCTTCTATTGAATATCTAAAACAACAATGATAGTATAGAATATTTATTTTATCTTCTTCTACCATTTGCTCAAATTTCTTTTCTCTGAACAATTTAGCATTGACATATTCATTTGTTATAATAAATTTAGGTGTAAATAGATTATTTAGTTCAGATATTTCTACAATTCTGTCTATTCCACTTCCAAGTTCTTCACACAATTTTAATTGCCTCATATAATATGCTAATTTTTCATTTCTACTTTTATTACAGTCATAAAATCTCCATAAATCTATCACTGATTTTCCAGGATTTGTTATTTCAACTCTATTGTCATACACCTCTATTTTTATTTCAGAACCAGTCATACTTAAATCTTGATGAATAATAGCATTTGCTATTAACTCTCTAATAATAGCCTGAGGATAAAATTCAAATACCTCCATTCTTCCATTAATAGGCCGTTGTTCTTGTGGTAAATATTTTTTTAATACTTTTATAATATTTTCAAATCCAATAGCATAGCCTTTTTTCCCTTCTAATTGTTCTCTTATTGAAGATTTAGTTATCCCATTATATATTACAATCCTAACTGCTTTTCTTTCTAAGTTAAAATCTTTTAAATTATGTGCTAGTAATAATGCACCTAATGCTTTTACTTTATAAAATTTATAATTTTCTTCTTTAACTATAAAACCATCTAACTCCATTTCATCAATTATTTGTTGAGAAGTTTTGTTTTCATCCCAACCTTTCATTTTAAAGTAAGTTCTATAATCTAAAAAATTTAAAACTTCTTCTACTGTCAGTTTTTCCCTCACAATTGTTTCTTCATAATTAAAACCACTTGTTTTGTTCCAAAGTATTCTTAATTGTTCTGGATATTCTTTTGCTAACTTGTTATTTGAACCTATTCTTAGGTATATTTCATTTTTGTAACTTATAGGTGTATGTGTTGCACTAGGAATTTTAATTATGGATATCTTTTTATTATCAATTATATAATCATCAATAAATTCAAAATTTATTCGTGGCAAAAGCATAGTTGAAATATATAACTTTACTTCTTGACCTCCTTTTAAATGATATTCAGATAATCTATTTGAAGTTCCAAGAATTTCCCAAGTTTTATCTTTAATTCCTATAATAATATATCCATAATCTTTATCATCTAATAAACACGAATTTGCAATTGCTGATATTGTTTCTCCTAATTTATCAACTTCTATTTTATTTTCTTTTACCTCTATCCAAGTTGTTTCTGAATTATTTTGTTTAAGATATTCTATAATATTTCCAATTTCATTATTATTTAAACTCATTATTTACTCCTAATTACCTATATTTTCTTATACATAACAACAGAACTACTATCAATATTTCTTATCTTCCACCCATTTTCTAAAAAAACTTTTACTTTTTTAGATTCTTTTTGCCATTCCAAAAGAAATATTGCTAACTTACAATATTGAACTGGAAGCCCTTTTCTAACTATATCAAATGCTTGTAAAAAAGTATTTAAATTTTCACTTTCTTTTACTTCTACATTTTCTACATACAATACAGAAGTTTCATAAGCCTCTTCTTCTTCCATTTCCAATTCTTTAACTATTTCTTCCTTTATTCCTTCATCATCTCCAATAGCCTTATATGAAAAATACATATCTCCTGATACACTATCACAATAATCCAAAGGGGAATAAAATGATGTTTCATCATTAAAATCCATATTAGCTGGAATAATTTTAGCACCTATTATTTCTAATAATTTTTTATCAATATAATCGCCTTTATCATCAAATATTCTCTTTTTTAAATATATATTTGAATTCCATATAAGAAAATCATCTTCATTTTCTAAATAGTTATCACACTCTATTTTTAAATCATTTTTTAATATTTTTTTTATTGATTTTTCATATGTTTCTATTTTATTTTCCAACATAATATCTCCTCCCTTTATACAATATTTGTTTCTTTTTTCAGGAATATACATAATAAAAAATGGTTCATCAACATAAACTTCATTCTCTGAAATTAACATCAGTTCTAATTTTTCTCTTTCTATTGTATTTAAATACATTCTTTCATAAGGGTATTTTTCTTTTTTAGAAGATAACAATATTTCATATTTATCATTTTCTAAATTACTCTTACTAATACTCAACCTTTCATATTTTTCTAAATAAGGGTACTTTTCTAATATCTCATTGGATAAATAGTTTATAAAATAACTTACATCAGTATATCCCTTTTGTGGTTTATCTGCTAGTTCTGAAATCAACCAATCCCTTCCAATTTTTTTGGCATTTCTTATTTTTCCTCTTCGAATCCATTGACGTACTGTTGTTGGTTTTACATCATATACTTTTGCATACTCTTCTACTGATAGATATAAACACTTCTCTTCTGCAATAATTATAGAATTTGAAGAAGATGTAGAATCTATTTCTCCTTTATCATCTAATGTTAATTCATCACAATACATTAGTTCTAAACTTATACCATCTCTATTCCAAAAATATTCATAATACCAATTTTTTGAATTCGTCACTGGAAAATCAAAATCTTTTATTGTATTATAAAAATTAAATAATATTTTAATAATAATCTCTCTTTTTTTCTCAGACCAATTTTCCTCTTTTGTTTCTTTACAGTATTCAATATAATCTCTTACTGATAGTAATACATCTTCTTTGTTTATAAGCATATTATTTATAAAATACTCTAGTTCTTTTTTTTTCATATATATCTTCCTTTTTTGTATTATATCTATACACTAAAAGTATATATGTTATACAATAAAATGTCAAGATTTTTATATAAATAAAAAATAAAAGTAATCCTTAGCAATTTTTTCTAAAATTTTTTCTCTCTAAAATCCTTATATTTTCAATAATAAAATCAACTATTTAGAACTTTTATAGTTTAATTACCAAATAAAAATTTTTCTTTTCTTAAAAAATATGCTAGAATGAGCTAAGATTAAGGAGGGGAAATATGTTATCTAATGTAAAAATAAAACTCGTACATTTTATCAAACTACAACTCTAAAAATTTTGAATATATATTGTTGTTAATAAAGGATATTTTTATGGAAATAAATTTTAAAAAGTGATAAAATAATCTAAGGAGTTTTGATGGAAATTAGATATAAAAATAAGAGAATTCGTGATATTTGCGAAAATGAGAAAAAAGCAATAAAAAAGTATAATAAAATTATTGCTGAAAAACTAATTTTCTCTATTGAATTTTTAAAGAACTCTAAGTCTTTAAAAGATGTTGCAGATTATAATAACTTTAGGCTTCATGAACTAAAATATGAAAGAAAAGGGCAATTTGCAATAGATTTAGGGAAAACAACAGGATACAGACTAATTATAGAACCTGTTACTGTCAACAAAGAAAATGAAATAATATCTTATGAAAGTATAAATATTGTTGAAATAATGGAGGTGTCAAATCATTATGAATAAGTTAGTTTTTAAATCAAAAGATAACGAGATGATTTTTCACCCAGGATATTTAATCAAAAATATAATGGATGAAGAAGGGAAAGATATAAAAGGAATGGTACAGCTATTAGGTTTAACAGAAAAAGAAATCACAGCTCTCATAAATGCTGAAATAAGTATAACAGATGATATGATAGATAGGATTGTCAAAAATTATGGAACATCAAAAGAATTATGGAAAAATTTTCAAAATAAATATGATTTAAAAATGAAAGAACTTGAAGAAAATCCTATGATTTTTAATTTTGAAAGAGAAAATGAAATTAGTTCAGACATAGCAAATAATATATTGAATAGTGTTTCTGAAAGGCTAATCATAGCATAAGGAGATAAGATGAAAATTAAAAAATATATATTAAAAAAATTTGACTATGATGTAAATGTTTCTAACAAAAAATTTTATACTCCTAATGAAACTATTAGACAAAAATTAGGAATTGATGTTAAATTTTTAGAAGACAGAAAAAATATGGAGTTAGCTTTTAAAATAGATATGATTGATAATGATAATATCAATATATTAAAATTAAAAGTAGAGTATATTTTAACATTAAATAATGAAGCTCTTGATATTAATAAGAGCTTCATCAAAAAAATTTTGTCCAAATTCTACCCAATTTTTAGTAAACTTGTACTAAATTTTTATAATAGTATTGGACTGAATAGTATACAATTACCAGAATTTTGAACAAAAGAAAAAGGTATTCAAAAAATGGATACCTTTTTTCATATTTTATCTATTTCCATACATTCTTTCATAGTATTTTTGATAATCACCTGAGACTACTTCATTCACCCAGTCTTGATTTTCTAAATACCACTTAACTGTTTTCCTTATTCCTGTTTCAAAGTCTGTTTCTGGATACCAACCTAAGTCTTTTGCTATCCTACTTGGATTAATTGCATATCTCATATCATGTCCTAATCTATCTTGAACATAAGTTATTAAATCATAATTAATATTTGATATATCTGTTTTTAAGACTTTTTTATACTCATCATTGTTAGTAATTTCTTCTTTTAATACATCTATTACTAATTTAACTATATTTATATTTTTTTCTTCATTGAAACCACCAATATTATATATTTCTCCTGATTTTGCTTCTCTCAAGACTAAATCTATTCCTTTACAATGGTCTTTAACATATAACCAATCTCTTATATTATCCCCCTTTCCATAAACTGGAAGCTTTTTACCTTCTAAGATATTTTTTATCATTAAAGGTATTAATTTTTCTGGAAAATGATAAGGTCCATAGTTATTTGAACATCTTGTTATATTAATTGGTAACTTATATGTTTCTCCATAAGCTATAACTATATGATCTGCCCCTGTTTTAGAAGCTGAGTAAGGACTTCTTGGATCTACTGGACTTTCTTCTGTAAAGAAATTATTTCCATAAGTTTTTAAATTTTTTCTGTTCTTAATAACTTTTTTTACATCTTCATCATCAATTACAAGTTCTATTGGCTCATCATAGTCTTTTGATAAACTTCCATAAACTTCATCAGTTGATACCTGAAGATATTTTATATCTTCTCTATATATTGGATAGCCATTTTCATCTTTTGATACAGTCCAAGCCTTTTTAGCATTGTCTAATAGGTTTTGAGTTCCTAATATATTTGTTTCTAAGAATATTTGTGGATTTTCAATAGATCTATCCACATGTGATTCTGCTGCAAAGTTAACAACATAATCTACTTTATTTTCAGAGAATACTCTTTCTATTTCTTTTCTATCTCTAATATCAACCTTTTCAAATTTAACTCTACTATCTTTTAATTCTTCTTTTATTGTTCCTAAATTCCCAGCATAAGTTAAAGAATCTACAACAATAACTTTTATATCCTTATGTTTCTTTAAGATATATTTTAAAAAATTTGCTCCTATAAAGCCTGCTGCTCCTGTTATTAGATATGTTTTCATATCTTACTCTCTTTCATTCTATTATTTTACTTTTCTATCTTTTTATATCTGTGAGCCTTTATATCCATACTACTTATTTATTTATAAAAAATTAATTATAAATTTTTAAATAACTAATAAATTTTAGTTTTTATATACTCAACAATGTACTAAAGAAAAAAACCTCTATAACAATAATTTTTCATATTGAAAATTCTGAAGGATATTTCTTATCTTTTTTAAGAACTATGTAATTCAATAGAATATTCTTTTTCTTTTATTTTTAAAGAATACATATATTTTTTATTTTGAAAAATAAAAGAGAAAGAAAAGTTATTTTCTTTATTTTCTTCAAGTAAAAAATTAGATAATTCATTTTCATCACAATGAAGATATCCTGTAATTTCTTTCATAATTTTAGTATTTGATAAAAAGCCTGGTTCAAATTTTCTTAATTCTTCTAAAGAATCAAATTCAAATATAACTCCTTCATCGTATTTTTTTATTTTCATTTTTAAAGTAGAGATATATTTAATATAAACTTGCTCCCATAATTTTTTTCTGGTTTCTTCACTCTCATATTCACTTTTCAGTATTTTTTTAAAAGAATCTGAAAAATTTTTATCAAAATACACATGTCCCATCATGATATATGAATTTTCCCCACCAATTACAACTCCTGTAATAAAGTTTTCTTTATCATATTGAATACAATATTCATCAGTTTTTCCACTTTTATATATTGCTGAATAATATGCTTGAACTTCATTCTCCAAAAATACATTTTTAGTAAAATAATTATCTGAAGAACAAATATAAGTATTTTCAAGTTTATCTAAAACTTTCATCAAAGAAGAAGTGTTATTATAGATATAATAATCTCCATTATCAACTATTGAAACATTATACTTATCTTTTAAATAGTAAAACATCTCTTTCTTGTAGCCAACTACTATTGTTATATCAAAAATTCTTGCTTCTTGAAGTTGTTTAATTTGTCTTTCAATTAGAATCTCACCATTGACTTTTAGTAAAGATTTTGGTATTTCAAAAGAAATAGGTACAAATCTCGAAGAAGTTCCTGCTGCTAAAATAATTGCATTTCTTTTCATTCTTTACCTCTATTTTCTTTTGTCAATATAATAATAGAGAAAAATATTGCAATAAAAGCGATTATAACTCTACTATTTAATGTTGTTCCTAAAATCAAAATATCTATTAAAACAACCCAAATTACATAAGTACTATTTAAAAGCATTCCAATTGCTCCACCTAAAATATCAATTGCACCATACCAAAGTAAATAAGAAATTGAACCTAAAAAAGAAGCTAACAATAACAATATTATTGTATTTTTAGATAATAATTCTTGAATTAATTCCACTTTAAAAAACCAAGGAATTACAAAGAATAAGTAGAAAATAGAAGAACTTGTTTGACGGATAAAAATAGCCACTTCAGAAGGAATATTTTCTGATTTCATAAAATAAGAAGCAATATTTCCCTCCAAAGCCCATCCTAAAATACAAGTTATAGAAAAAAGAAAACCTATTTTATAATCAGGATAAAGTTCAATATTATCAAATGTTAAACATAAAGTAAGTAGTCCAATTGTACTAAGACAGATTGAAAGTACTCTATACCTATTTAAATTTTCATGAAATAAAAATTTTGCTATTAGTGCTCCTAAAACTGGATAAAGTATCGAAATTGAAGCAGAATAAGAAGGACCAATGTATTTTGTACTCATTAGATAACTGGCCATTCCTAAAGGTCCACCTAAAACTGCTGCCCCTATCATAACTAATAATGATTTTTTATTAACAGTTTTTAGAAAAAATTTTACTTTATATTTTAATCTTATTAAATTTATATATAAATAAATAGAAGAAAAGAAATCATGTAAAAATGCAAAAAATAATGGTAAAAAATAAATATTCTTTCCCTGTAATAAAATAGATAGAATAATTGTATTAAATGACCAAAAAATAGCTGATGATAATCCAAAGATAATTCCTTTATTTTTTAATTTCATTTTCTAACTCCTCCAATAGCTGTATTGCTCTATAGTATCTATTTTTCCCATAATCTCCAAAATTTTCTCCATTTTCTTCTTTTAATATTGTCCATAAACTCCAAAGAAAATCTTGACATATTTGATATATAAGTACTTTCACTTTATTTTTTTTAGTTGGTTTTCCTTCAAAATATATATCAATAAATTCTTTAGTTTCTTGCTTACTAAAATTACATTCTAAACAAAATGCTCCTATATCCCATTCTACCTCATTCATACCAGAGTATTCCCAATCTATTAAATGTATCTTTCCATTTGATATAATAAAATTTTCAGGAACAGTATCATTGTGACAAGGAACTAAGTGAATGCCTATTTTTTTTAAAATTTCCTTTAAATCAAAAACTTTTTTTCTTACTACTTTATAATCTGAATATTTTCTAGATGTTAATTTTTCAATTTCTGACTCATATTTTATAATTTCTTTAAAAACATCAAATTGATTTCCAAAAACTAGATTACTATTATGTAAATTTTTTAGTATAGTAGCTACTTTATTTTTATATTTTAATGCTGTTATAGGATTTAATGTTTCTGCTCTATCTATATACTTTGCAATTTTTACACCAGAATTTTCATTAAAGTGCATAATTTCAGCATCAATCTTTAAATTTTGAATAAGCTGAACATTATAATTTTCATTTTTTCTATTAACAAAACAAGAACATCCTTCTCCAGGAAGTCTAAATACATACTTTTCTCCATTTAACTCCACTTTAAAATTATGATTTGTCATTCCACCTAGTGGCTCTATTTTATCTATATCTTCATCTTTTATATTTAATTCTTTTTTTAAATAATTTTTGATAAATTCTACTGTACTAATATTTTCAATTTTTTTAATAGATGGGTATAAATATTCTTTTACTTGTTCATAATTTTCATCATTTGAAATTTCTCCCCATAATAAATAATCAATATGAATAGTATAAATTTCATTTTTTATTCCACATTCTCTAATTGCATACTCATAGGAAAATTTATCATTTTCTACTGAAAGAGAATAAATATCTTTAAGTAAATTTTTAGATAATTTTGAAACTCCTAACATTTCTCCACTATAATTTGCCAATTCTCTAAGATCTTTTGAAATATTCCAAAGTTTCCCATTTTTTTCTTCTATGAAACTTTCATTTTTGTAGCCTTTTTCAGCACTAACTAATATAGCATTTGTTTTATCAGTTTCTAAAATATAGTCAAGTGCTTTTTCCTCATATATGATATCGCTATCTAAAAGAATGATATCTTCTTGACATACATCTTTCAGAGTTAATAATGAATAAAAACTTCCTTTTTTTTGATAATCATTATTACAAATTATTTGTACCTGAGGATATTTTGTTTCTAAATACGAAAATAACTCTGCTTTATATCCACAAACGATATAAATTTTTTTTATTTTTTTCTTTAATAGCAAATTTATACTTCTTTCTATTATTTTTTCATTGTCAATTTCAATTAAAGCATTTGGAATTTCAAAAAAATTTGATTCTCCAGCTGCTAAGATTATTGCTTTTTCAGGATGAGTTTCTTTATAGTAATTCTCTAAAAAATCAATTCCTTTTATTGAAATCTTATATTCTTCATTTCTACTTTCTTTTTCTAAAATATAACCTTCTTTTTCTAAAAATTTAATAATACTGTTTACTTTTCCTAAAGATATATCTAATTTTTTAGAAATTTGTCTTTGGGTGATTTTTGGGAATTTATATAAGACCTGTAAAACTTTTTTGTTCATTTTTATACCTCCAGTATATTTTAATGAACAAATTATAACATTTCTTTTTTATATAGTCAATAGTTTAAAGAGAAAACTATCTACATAGTGGGTTTAATAATAATATCTTTCCTCAGGAAAAGATATATTATTATCTTGGATATTTAAAAAAGCTAGTTATCAATAAAAATTGCACTGAGTGTGACATTAAAATACTATTTCCACTATCTATAAATTCTAAAAAAAGTATTTTGAATTTTCTGGAATTTTTATATTTTTTTTGTAAATATACTTTTTATTTTTAATTTGTCTTATATAGTATTTTGGATATTCATTTTTATCATCTTTTATTGTTATAAAATTTAGTTGGATATTATCTAAATTAATATTAATTTCATTTTTATCTAATGCAATTTGATATATTTTATCACTACTTTTATTTTCATCTATTTCAAAAAATAAATCAAAACTATCATTAGATTTCTTATATATTTTTAGAGCATTAATAATAACACCTTTTTCTAGTTCTAATTTTAAATTAAATATTTTAAAAATATTATCATTTTCTATATTTTCAGAATAGAAATAATATTCTGGACTTCTATCTAATTTTTCATACTTGTTATAATTTTTAGTATTTAATAAAATTGGATAATTTTTTTTTAAATAATCTGCTATTTCAAAAGAAACTTCATCAGCTCCAGCAAGAGAAATGTGTCCATTATCTCGAAAACAAATTTTTTCATATTTTTTCCTACCATCATTAAAATCAATACTGTCAATATTATATTTTAGCATTAAATCTTTTAAAGATAAGTTATGTAAGATACTCAAAGTATCATATTCTCCTATAACTGGTGGCGAAACTAAAATAATTTTAATATCTTCTTTTTGGCAAATGTTAAATAAATTTTCTAATAAGATTAAATATTTTTTTTGTATAGAAAAAGAATGAGGTAATTTTTTATTCCATTCTTCTTCATATATTTCATAAGTAAGAAGATTTGTCATAAAATCAAAACTATAAAATCCTTTATATTTAAGTCTAATTTTCTGACTTTCGATAATTTCATTTTGTTCTTTTCTTAAATCATTAAATTCTTTCCACCTACTATGATAATAAGTGGTCTTTATGAAGTGGTTTCCCCACTCTGAAATAGGTAAAGAATTTTTAATAAGTCTTAATTTATTTATAGAAAAATTCATAACATCAAGTTGAATCCTAAGAGAAGGCTCTGTAACCTCTCTTTGAATTGGAAAAACTTCCATTATTATTACTTTAGGCCTCTGTTTTTTTAATACTTCTAAAATAACAGAGTATGAAATTGGCAATGACTGGCTACTAGTTCCTAGATTTAGTGAACTAGATTTTAAATAATGATCAAAGATTCTTGTATTAAAAGTAGAATATGAATGAGAACTTCCAACAAATAACAAATCAATACTATCTTTAGGAAGTTTATAGTAGGTATAATCAAGTATAATGTCATGTTCTTTAAATAGTTTCTCTTCATAATAGTAAAAAGATAAAGTTAAAATAATCAAAAATAATACAGATTTTAATAAATTTCTCATTTTTTTCCTTCCTTAAAACCCCATATATATAAAATTAGCTGGATTGTAACCTTCCCCATAGATACCAAATATAATAACAATATGTATTAATAAAATATATAAAGCCCATTTGAAAGGGAGATAAAAGTTTGAAATTTTTTCTCTAACTTGAATTTTTTGGCTAGCTCTTTCAAATAAATATAAAATCAATAATGAGATGATTAAAACTATAAAATCTTTTTTATCAATACTTCCACTTTCTATTAATTTTCCTATACTTGAAAAAAACTTTTTATTAATTTTTTTAACCATAGTATAAGCAGTTTTCCAATCTGAAGCTCTAAAAAATATCCAAGCGATAGAGACTAAAATAAAAGTTGTAAACTTTGAAATAAAAGTATCTAAGTTATTGTTGTCTGAAATAAGTGATAAGATACTTTTATATTTTAAAATTTTTTTAATTTTATTTAAAGTATTAGCTATTAAATCAGCTAAAATTTGGTAAAAAGCATGCACCCCCCCCCAAATAATAAATTTAAAACCAACACCATGCCAAAGTCCACTGATAATAAAAGTTATAGTAATGTTAATATATTTTCTAAAATTTCCTTTTCTATTTCCACCTAGAGGAATATAGATATAATCTTTAAGCCAGGTACTTAAAGAAATATGCCATCTACTCCAAAAAGCTTTAATAGAAGTTGCAGAGTTCGGGAAATTAAAGTTTTGAATTAAATTAATATTCATACTTTGAGTAATTCCTCTACTTATATCAACTGCACCAGAAAAATCTGTGTATAATTCTAAGGCATAACACATTCCTGATAAAAGCATAATAATACCAGTATACTCAGTATTTTTATCAAAAATTTCATTTGTTATCATATTTAGTCTATTAGAAATAACTAATTTTTTAAATAATCCCCAAAGAACTAATTGTAAACCAAAACAAAATTGTTTATAATCAAATTTATGATAAGTTATTAATTGTTTTTCAAGCTGCTCGTATCTTGAAATAGGTCCTTGTAAGAATATTGGGAAAAATGTCATATACAATAAAAAATGTATAAAATTTTTCTCAACTTCGTATTTGTTTTTATAGATATCAACAATATAAGCAATTCCTTGTAAAGTATAAAATGATATTCCTAAAGGTAAATATAATTTATTTGCTATTGAATTAAGAACAATAGATTGAATATGTAGCTTTCCTAAAAGATAAACAAAAAATTTCATATATATCAAAATTCCACTGGTACAAAAAATTGAAAATATAAAAATACTTTTTTTCCTATAATTTTTTAGTAAGATTCCAAAAATATAAAAAATAGTTGAAATTCCTAAAATAAAATATAAAAATTCTATTTTATAAAAGCTTATGTAATAAAAATTAAAAAGTAATAGTACAAATTTTTGTATTTTTTTTGGTATAAGAAAATATATAGGAAAAAAAAATACTAAAAAAAGTAAAAATTCAAAAGTAATAAAATTCATAAACTCCCCCTAAAAATCAGTAAACTTGATGACAAAATATTATATTTTCTAAAAGCTCTCAAGTATTTTAAGTTTAATTTAAAGTCATAATTATAAAAAATTAGAGTTAAATAATAAATGATGTTGATAAAAAATTTCTATCAATATCATTTTTAAATAAAAAATATTGAGACAATCAAACTTCCTTATTAAAATTAGATTGCTAAAAATAACCATAAAAGAAAGTGACTTCATTACCTCTATCTAATTTTAGCAAAACTATCTAAAATATTCAAGATAACAATATATTCTTTCCAGAAGAAGACTATTATCAAATTATAAAAAAATGATTACCTAATAAAAATTTTTAAAGTTTTTTTAATTTAATTATTGTTCTTGCCTACATTGTAATTCTAAAAATATTGTCAAAAATAGTTCTGGAGAACACAAATTTTACTTGAGAATATTTTATTTCTAAATATAAAAATAGCTCTTCTTTATATCCATAAATAATATAAATTTCTTTTATTTTTTCTTTAATAATAAATTTATACTTCTTTCTATTGTTTTTTATTATCAACTTCAATTAAAGTACTTAGAATTTCAAAAAAGCTAATTCTCCAACTGTTAAAATTACTGCTTTTTTACAAACAGAATATCAACGTTGTGTAATTCACCAAGTAAGAAATACTTTAAAATATGTATCATACAAAGATAAGAAAGAATTTGCTTCTGATTTAAAAAGTATATATCTATCATCAACAGAATCACAAGCATTAGAAAATTTAGATAAAGTTAATCACAAACCACCACTTGAAGTGGTGGTTTGCACTATGCCTAAAAGGCACTATTACAAGCTTGAGGCTAAAGCCTTACAATTTGGTCTGCCTTTTGCGTATAGCCCCATTCAGCTATTAAAATAGCTCTTGTTTTTTATTTCTCTTCAACATTGAAAGGATCAAAATATTCTTTTAATGTCATTTGATCCATTATTTTATCTTCTTCTATTTGGTTCTTTATGTATTGAGCTATCCTTTCCTTATTTCTTCCCACTGTATCTACATAATAACCTCTGCACCAAAAAGTTCTATTCCCATATTTATATTTTAAGTTCGCATACCTATCAAATATCATTAATGAACTTTTTCCCTTTAAATATCCCATAAATATTGATACTGCTATCTTTGGTGCTATGCTCACTAACATATGTATATGGTCTACACATGCACTTGCTTCTATTATTTCTACTTGTATGATAAATATATAAAATATTTATCTATACAACCTCCTTTCATAGTTTATTTTATTTAATATTTTTTATATAATTTATTTATACTGTGGACTTTTTATTTTTACTTAAAGAGCTTTTGCTACTTTTTAAAGGAGACTACTGCCACACTCTTTTAACTCATATACTTATAGTTGGATAAGTTCTTAAACTTTCATATATCGCAAGAATGTATTGTTTTTTAAGATGTGGACTCCACAGTTATTAATTTTTTAAGGATGTGATCTTATGTTTTTACTTGGTATTGATATTGCTAAACTTAATCATGTTGCTTCTTATATCGATTCTTCTACTAATGAAGTTATTTTTTCTAATTTTAAATTCAAAAATGATTTTAAAGGTTTTAGCGCTCTTTTAAATAAAATCAAAAGTTTTGATGCTAAAAATCTTATTATTGGTTTAGAATCAACTTCTCATTATGGAGAAAATCTTATTAATTTTTTATTTAGACATGATTTTAAAGTTGCACTTATTAATCCTTTACAAACTTCACATCTGAGAAAAGCTAATATTAGAGATGCTAAAAATGATAATCTGGACTCTCTTAATATTGCTAAATCTTTACTTTTTACTAAACTTAACTTTGTTTCTGAAAAAAACATTGAATGTTTTTCTCTAAAAAAACTTACTAGATTTAGGAATAACTTAATTAAGCAAAGAAGTAAAGCTAAAATTCAATTAACATCTTTACTTGATTTACTTTTTCCAGAATTACAATATCTTTTTAAAAGTAAAATTCATAGCAAAGCAATCTACTCTCTTCTTAAAAAATATCCTTCAACAGAGGAAATAGCAGCCCTAAAAGATGATGAAATTTCTAATCTTTTATATGCTTCTTCAAAAGGACATTTCAAAAAAGAAAAGTCCATTGAGCTTAAGAGTCTTGCTAAAACCACTGTTGGTATCAAGGATACTTCAATCTCATTACATTTAATTCAGTTAATAGAATTAATTGAATTATATACCAAACAAATTAAAGATATTGAAATTAAAATAACTGATACAGTCAATAAATTAGACACAACACTTCTATCAGTTCCAGGAATAAGCATTATTGCCTGCGCTATTATATTAGGTGAAACAAATAATTTTGAAAATTTTTCTAGTTCTAAAAAATTACTTGCATTTGCCGGTCTTGATCCAAAGATAAGACAATCAGGTAATTTTAATGCTTCATCTTGTAGAATATCTAAAAAGGGTTCTCCATATTTAAGATATGCTTTAATCTTTACTGCTTGGAATATTGTTAGACATTCAGAAAAATTTAATAAATATTATTTTTTAAAGCGCTCACAAGGTAAATCACATTACAATGCTCTTGGTCATGTTGCACATAAACTAGTAAGAATTTTATTTACACTGATAAAGAAAAATATTTCTTATCAAGAAGAAAAATTAGAATAATATCTATTAAGATTTTATTATATGAAAAATCAAGAGTCTCATAACTCTAATTTTGTTATGTCTAAATTTCTTATTTGAAATTTTTTTTAAAAGTTCTTGACATTTCATAGTTGGTCTCCTTTAAATTCACAAAGTTTTCTTAATATTGCTCCTATATCTTTTTTTATCTTTCCATATATCGCTTGTCTTCTATATTTTGGTGTAAATACTATATGATATTTACAATTCCACTTTGTATGTGCTAAACTATTTTTGTCCAT
Protein sequences of DBSCAN-SWA_1 >NC_003454|153277:174314|164780_165653_-|NP_602484.1|holin|DBSCAN-SWA MKRNAIILAAGTSSRFVPISFEIPKSLLKVNGEILIERQIKQLQEARIFDITIVVGYKKEMFYYLKDKYNVSIVDNGDYYIYNNTSSLMKVLDKLENTYICSSDNYFTKNVFLENEVQAYYSAIYKSGKTDEYCIQYDKENFITGVVIGGENSYIMMGHVYFDKNFSDSFKKILKSEYESEETRKKLWEQVYIKYISTLKMKIKKYDEGVIFEFDSLEELRKFEPGFLSNTKIMKEITGYLHCDENELSNFLLEENKENNFSFSFIFQNKKYMYSLKIKEKEYSIELHSS >NC_003454|153277:174314|172180_172285_+|NP_602490.1|DBSCAN-SWA MVVCTMPKRHYYKLEAKALQFGLPFAYSPIQLLK >NC_003454|153277:174314|168572_169910_-|NP_602487.1|DBSCAN-SWA MRNLLKSVLFLIILTLSFYYYEEKLFKEHDIILDYTYYKLPKDSIDLLFVGSSHSYSTFNTRIFDHYLKSSSLNLGTSSQSLPISYSVILEVLKKQRPKVIIMEVFPIQREVTEPSLRIQLDVMNFSINKLRLIKNSLPISEWGNHFIKTTYYHSRWKEFNDLRKEQNEIIESQKIRLKYKGFYSFDFMTNLLTYEIYEEEWNKKLPHSFSIQKKYLILLENLFNICQKEDIKIILVSPPVIGEYDTLSILHNLSLKDLMLKYNIDSIDFNDGRKKYEKICFRDNGHISLAGADEVSFEIADYLKKNYPILLNTKNYNKYEKLDRSPEYYFYSENIENDNIFKIFNLKLELEKGVIINALKIYKKSNDSFDLFFEIDENKSSDKIYQIALDKNEININLDNIQLNFITIKDDKNEYPKYYIRQIKNKKYIYKKNIKIPENSKYFF >NC_003454|153277:174314|153277_154981_-|NP_602474.1|tRNA|DBSCAN-SWA MRFSKAYIKTLKETPKEAEIASHKLMLRAGMIKKLASGIYAYLPLGYRTIKKIENIVREEMDRAGALELLMPVVQPAELWQESGRWDVMGPEMLRLKDRHERDFVLSPTQEEMITAIIRSDISSYKSLPINLYHIQTKFRDERRPRFGLMRGREFTMKDAYSFHTSQESLDEEFLNMRDTYTRIFTRCGLKFRPVDADSGNIGGSGSQEFQVLAESGEDEIIYSDGSEYAANIEKAVSELINPPKEELKEVELVHTPDCPTIESLAKYLDVPLERTVKALTYKDMGTDEIYMVLIRGDFEVNEVKLKNILNAVEVEMATDEEIEKIGLKKGYIGPYKLPAKIKIVADLSVPEVSNHIVGSHQKDYHYKNVNYDRDYTADIVTDIRKVRVGDNCITGGKLHSARGIECGQIFKLGDKYSKAMNATYLDEKGKTQFMLMGCYGIGVTRTMAASIEQNNDENGIIWPVSIAPYIVDVIPANIKNEVQVSLAEKIYNELQEEKIDVMLDDRDEKPGFKFKDADLIGFPFKVVVGKRADEGIVELKIRRTGETLEVSQNEVIAKIKELMRIY >NC_003454|153277:174314|171762_171948_-|NP_602489.1|DBSCAN-SWA MKLIIKNNRKKYKFIIKEKIKEIYIIYGYKEELFLYLEIKYSQVKFVFSRTIFDNIFRITM >NC_003454|153277:174314|163362_164562_-|NP_602483.1|DBSCAN-SWA MKTYLITGAAGFIGANFLKYILKKHKDIKVIVVDSLTYAGNLGTIKEELKDSRVKFEKVDIRDRKEIERVFSENKVDYVVNFAAESHVDRSIENPQIFLETNILGTQNLLDNAKKAWTVSKDENGYPIYREDIKYLQVSTDEVYGSLSKDYDEPIELVIDDEDVKKVIKNRKNLKTYGNNFFTEESPVDPRSPYSASKTGADHIVIAYGETYKLPINITRCSNNYGPYHFPEKLIPLMIKNILEGKKLPVYGKGDNIRDWLYVKDHCKGIDLVLREAKSGEIYNIGGFNEEKNINIVKLVIDVLKEEITNNDEYKKVLKTDISNINYDLITYVQDRLGHDMRYAINPSRIAKDLGWYPETDFETGIRKTVKWYLENQDWVNEVVSGDYQKYYERMYGNR >NC_003454|153277:174314|162963_163317_+|NP_602482.1|DBSCAN-SWA MKIKKYILKKFDYDVNVSNKKFYTPNETIRQKLGIDVKFLEDRKNMELAFKIDMIDNDNINILKLKVEYILTLNNEALDINKSFIKKILSKFYPIFSKLVLNFYNSIGLNSIQLPEF >NC_003454|153277:174314|155175_155886_+|NP_602475.1|DBSCAN-SWA MVIMKKIFYFILFFSILFNLSLLSYSFQNREKNIFYIKNIENFHTLDIMENSISKQIPNSSHLIELEKDSSKVENDNVEFAQSIFRLLIIFSIFVPFSFTGLFLIIYLVIEGFKHCRCRNSSLEDLENITSNNSFCYTFILNLNVYDVLFHFILAIINFCFTLYLMHTGTLPINLNLTFLYYLFFVFKNIFKLDNKTAFISSFAIIIFLTIISLGIFNLTYFLDLIKMLPNLKLSS >NC_003454|153277:174314|172295_172568_-|NP_602491.1|transposase|DBSCAN-SWA MLVSIAPKIAVSIFMGYLKGKSSLMIFDRYANLKYKYGNRTFWCRGYYVDTVGRNKERIAQYIKNQIEEDKIMDQMTLKEYFDPFNVEEK >NC_003454|153277:174314|158981_160436_-|NP_602478.1|DBSCAN-SWA MSLNNNEIGNIIEYLKQNNSETTWIEVKENKIEVDKLGETISAIANSCLLDDKDYGYIIIGIKDKTWEILGTSNRLSEYHLKGGQEVKLYISTMLLPRINFEFIDDYIIDNKKISIIKIPSATHTPISYKNEIYLRIGSNNKLAKEYPEQLRILWNKTSGFNYEETIVREKLTVEEVLNFLDYRTYFKMKGWDENKTSQQIIDEMELDGFIVKEENYKFYKVKALGALLLAHNLKDFNLERKAVRIVIYNGITKSSIREQLEGKKGYAIGFENIIKVLKKYLPQEQRPINGRMEVFEFYPQAIIRELIANAIIHQDLSMTGSEIKIEVYDNRVEITNPGKSVIDLWRFYDCNKSRNEKLAYYMRQLKLCEELGSGIDRIVEISELNNLFTPKFIITNEYVNAKLFREKKFEQMVEEDKINILYYHCCFRYSIEDYMTNSSLRNRFLLDNSKPSTDRISNLIKKAKNMKLIKVGPNKSYIPFWAE >NC_003454|153277:174314|160453_161824_-|NP_602479.1|DBSCAN-SWA MLINKEDVLLSVRDYIEYCKETKEENWSEKKREIIIKILFNFYNTIKDFDFPVTNSKNWYYEYFWNRDGISLELMYCDELTLDDKGEIDSTSSSNSIIIAEEKCLYLSVEEYAKVYDVKPTTVRQWIRRGKIRNAKKIGRDWLISELADKPQKGYTDVSYFINYLSNEILEKYPYLEKYERLSISKSNLENDKYEILLSSKKEKYPYERMYLNTIEREKLELMLISENEVYVDEPFFIMYIPEKRNKYCIKGGDIMLENKIETYEKSIKKILKNDLKIECDNYLENEDDFLIWNSNIYLKKRIFDDKGDYIDKKLLEIIGAKIIPANMDFNDETSFYSPLDYCDSVSGDMYFSYKAIGDDEGIKEEIVKELEMEEEEAYETSVLYVENVEVKESENLNTFLQAFDIVRKGLPVQYCKLAIFLLEWQKESKKVKVFLENGWKIRNIDSSSVVMYKKI >NC_003454|153277:174314|162654_162954_+|NP_602481.1|DBSCAN-SWA MDEEGKDIKGMVQLLGLTEKEITALINAEISITDDMIDRIVKNYGTSKELWKNFQNKYDLKMKELEENPMIFNFERENEISSDIANNILNSVSERLIIA >NC_003454|153277:174314|166559_168356_-|NP_602486.1|holin|DBSCAN-SWA MNKKVLQVLYKFPKITQRQISKKLDISLGKVNSIIKFLEKEGYILEKESRNEEYKISIKGIDFLENYYKETHPEKAIILAAGESNFFEIPNALIEIDNEKIIERSINLLLKKKIKKIYIVCGYKAELFSYLETKYPQVQIICNNDYQKKGSFYSLLTLKDVCQEDIILLDSDIIYEEKALDYILETDKTNAILVSAEKGYKNESFIEEKNGKLWNISKDLRELANYSGEMLGVSKLSKNLLKDIYSLSVENDKFSYEYAIRECGIKNEIYTIHIDYLLWGEISNDENYEQVKEYLYPSIKKIENISTVEFIKNYLKKELNIKDEDIDKIEPLGGMTNHNFKVELNGEKYVFRLPGEGCSCFVNRKNENYNVQLIQNLKIDAEIMHFNENSGVKIAKYIDRAETLNPITALKYKNKVATILKNLHNSNLVFGNQFDVFKEIIKYESEIEKLTSRKYSDYKVVRKKVFDLKEILKKIGIHLVPCHNDTVPENFIISNGKIHLIDWEYSGMNEVEWDIGAFCLECNFSKQETKEFIDIYFEGKPTKKNKVKVLIYQICQDFLWSLWTILKEENGENFGDYGKNRYYRAIQLLEELENEIKK >NC_003454|153277:174314|158052_158802_-|NP_602477.1|DBSCAN-SWA MSGHSKWNNIQHRKGAQDKKRAKLFTKFGRELTIAAKEGGGDPNFNPRLRLAIEKAKAGNMPKDILERAIKKGSGELEGVDFTEMRYEGYGPAGTAFIVEAVTDNKNRTASEMRMTFTRKDGNLGADGAVSWMFKKKGVITVKAEGIDADEFMMAALEAGAEDVTEDDGYFEVTTEYTEFQTVLENLKNAGYQYEEAEISMIPENTVEITDLETAKKVMALYDALEDLDDSQNVYSNFDIPDEILEQLD >NC_003454|153277:174314|169922_171383_-|NP_602488.1|DBSCAN-SWA MNFITFEFLLFLVFFFPIYFLIPKKIQKFVLLLFNFYYISFYKIEFLYFILGISTIFYIFGILLKNYRKKSIFIFSIFCTSGILIYMKFFVYLLGKLHIQSIVLNSIANKLYLPLGISFYTLQGIAYIVDIYKNKYEVEKNFIHFLLYMTFFPIFLQGPISRYEQLEKQLITYHKFDYKQFCFGLQLVLWGLFKKLVISNRLNMITNEIFDKNTEYTGIIMLLSGMCYALELYTDFSGAVDISRGITQSMNINLIQNFNFPNSATSIKAFWSRWHISLSTWLKDYIYIPLGGNRKGNFRKYINITITFIISGLWHGVGFKFIIWGGVHAFYQILADLIANTLNKIKKILKYKSILSLISDNNNLDTFISKFTTFILVSIAWIFFRASDWKTAYTMVKKINKKFFSSIGKLIESGSIDKKDFIVLIISLLILYLFERASQKIQVREKISNFYLPFKWALYILLIHIVIIFGIYGEGYNPANFIYMGF >NC_003454|153277:174314|162254_162590_+|NP_602480.1|DBSCAN-SWA MEIRYKNKRIRDICENEKKAIKKYNKIIAEKLIFSIEFLKNSKSLKDVADYNNFRLHELKYERKGQFAIDLGKTTGYRLIIEPVTVNKENEIISYESINIVEIMEVSNHYE >NC_003454|153277:174314|174158_174314_-|NP_602493.1|transposase|DBSCAN-SWA MDKNSLAHTKWNCKYHIVFTPKYRRQAIYGKIKKDIGAILRKLCEFKGDQL >NC_003454|153277:174314|165649_166576_-|NP_602485.1|holin|DBSCAN-SWA MKLKNKGIIFGLSSAIFWSFNTIILSILLQGKNIYFLPLFFAFLHDFFSSIYLYINLIRLKYKVKFFLKTVNKKSLLVMIGAAVLGGPLGMASYLMSTKYIGPSYSASISILYPVLGALIAKFLFHENLNRYRVLSICLSTIGLLTLCLTFDNIELYPDYKIGFLFSITCILGWALEGNIASYFMKSENIPSEVAIFIRQTSSSIFYLFFVIPWFFKVELIQELLSKNTIILLLLASFLGSISYLLWYGAIDILGGAIGMLLNSTYVIWVVLIDILILGTTLNSRVIIAFIAIFFSIIILTKENRGKE >NC_003454|153277:174314|172878_174054_+|NP_602492.1|transposase|DBSCAN-SWA MFLLGIDIAKLNHVASYIDSSTNEVIFSNFKFKNDFKGFSALLNKIKSFDAKNLIIGLESTSHYGENLINFLFRHDFKVALINPLQTSHLRKANIRDAKNDNLDSLNIAKSLLFTKLNFVSEKNIECFSLKKLTRFRNNLIKQRSKAKIQLTSLLDLLFPELQYLFKSKIHSKAIYSLLKKYPSTEEIAALKDDEISNLLYASSKGHFKKEKSIELKSLAKTTVGIKDTSISLHLIQLIELIELYTKQIKDIEIKITDTVNKLDTTLLSVPGISIIACAIILGETNNFENFSSSKKLLAFAGLDPKIRQSGNFNASSCRISKKGSPYLRYALIFTAWNIVRHSEKFNKYYFLKRSQGKSHYNALGHVAHKLVRILFTLIKKNISYQEEKLE >NC_003454|153277:174314|155928_157998_-|NP_602476.1|DBSCAN-SWA MIESYRNIYSKLEDIPTKYITAKQLSNLKSLGINTVYDLIYYFPRAYDDRTNIKKIGELKFNEYVVLKATVMSAVNLTVRSGKKIVKAMVTDGTGIMEILWFGMPYIKKSLKIGEEYLFIGQTKKSAVFQLINPEYKLFSGQQKVSENEILPIYSSNKNITQNSLRKLVEKFLVNFLNYFEENIPKKLIKEYKIMERKSAIKNIHYPVSMKEIEEAKRRFAIEELLILELGILKNRFIIENSNSKNYEVEGKKEKVREFLSQLTFNLTNAQKKVIKEIYDEISNGKIVNRLIQGDVGSGKTVVAMVMLIYMAENGYQGALMAPTEILANQHYLGIKERLEQIGLRVELLTSSIKGKKKNEILDGIANGDIDIVIGTHSLIEDDVIFKKLGLIVIDEQHRFGVNQRNKLREKGFLGNLLVMSATPIPRSLALSIYGDLDLSIIDELPPGRTPIKTKWIANDEDLEKMYNFIYKKVNDGNQAYFVAPLIETSDKMALKSVDKVSEEIERKFSNKKIGIIHGKMKAKEKDEVMLKFKNKEYDILIATTVIEVGIDVPASTIMTIYNAERFGLSALHQLRGRVGRGSKQSYCFLISNSTTENSKQRLSIMEETEDGFRIAEEDLKLRNSGEIFGLRQSGFSDLKFIDIIYDVKTIKLVRDECIKYLKEHKGEIDNIYLKYDIEQKFSDIQAGN |
20 | Escherichia_phage(50.0%) | tRNA,transposase,holin | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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DBSCAN-SWA_2 |
1634226 : 1641757
Sequences of DBSCAN-SWA_2
Nucleotide sequences of DBSCAN-SWA_2 >NC_003454|1634226:1641757|DBSCAN-SWA TTTAATGTTTAAAGTGTCTTAATTTTGAGAATATCATAGAAATATTATTTCTATCACATTCTTCAATAGAATCTTTATCATTTACAGAACCACTAGGTTGAATTATAGCTTTAACTCCATTCTTAGCTGCTAATTCAATAACATCTTTAAATGGAAAAAATGCATCTGAAGAAAGTACAACATCTGTTGCATTAAATCTTTCTTTTGCTCTTTCTAATGCTTTTTCAGCAGCCCAAATTCTACTTACTTCTCCTCCACCTATTCCTAATGTTTGTAAATTTTTAGCTACAACAATAGCATTTGATTTTACAAATTTTACTACTTTTAAAGCAAAAATTAAATCTTTTTCTTCTTGAGATGTAGGTTTAGCCTTTGTTACTACTTCTAAATCTTCATATAATTTATTATTTGTATCTTGAATTAAAATTCCACCATCAACTTTTATTAATTCTTTTTTATCACTTGGTTTATTTTTGCATTCAATAAGTCTTATATTCTTCTTTTTAGTTAATATTTCTAAAGCAGCTTTTGAAAAACTTGGTGCTATTATAATTTCTAAAAATATCTCATTTAGTAATTTTGCAGTTGCTTCATCTACTTCTCTATTAAAAGCTACTATTCCACCAAAAATAGACACTGGATCTGTTTCATAAGCTTTTTTATAAGCTCCTTCTACATTATCTCCTAATGCTACTCCACAAGGTGTTGAGTGTTTTACTGCACAACAACAAATTTCATCAAATTCTGAAACAACTTTCCAAGCTAAGTCCATATCTCTAATATTATTATATGAAAGTTCCTTGCCATTAAGCTGTTTAAAATCTTTCATAGCCCCATCTGTCATATTATCAGTATAGTATGCAGCTTTTTGATGTGAATTTTCTCCATATCTCATTTCCATAAATTTTTTATATGATATATTTAAATATTCTGAGAAGTCTTCATCTAATAAGAATTGTGATATAGCCGCATCATAGGCAGAAGTCAAATTAAAAACTTTTCCTGCTAATTTTTTTCTAGCTTCATAAGAAACATCATCAGACTTATTGATTTCTTCCTTTATAGATTCATAATCTTTAACATCAGAAATAACAACCACATTTTTAAAAGATTTAGCAGCAGATCTAAGCATAGTAGGTCCACCTATATCAATAAATTCAATTTTTTCTTCAAAAGACAAATCTTCTTTAACCTTTTCAAAGAAAGGATATAGATTTACTATAACATAGTCTATAGTATCAATATTTCTTTCTTTTAAAGTTCTCATATGTTCTTCATTATCTCTCAATGCTAAAATTCCACCATGTATATTTGGATGTAAAGTTTTAACTCTACCATCTAACATTTCTTCAAAATTTGTTATTTTACTAACTTCAATAACTTCAATATTATTTTCTTTTAAATATTTATATGTTCCGCCAGTGGAAATAATTTCTATTCCCTTACTGACTAAAAATTTTGCAAAATCCAATATACCTGTTTTGTCATATACTGAAATTAAGGCTCTTTTTCTCATATCTATTTCCCTTTCTATTTTGATTTTATAACTCCATAATTATTTCATAATTTTTTACATCAGGATTTTTTCTTTCACAACACCATTCTTTCATTAATCTAATTAAATCTTTTTTATCTGAAACATTGGTTTGATATAATTTTTTATCTATCATTACTTCAAAATAATATTTATCTATTAATATTTTAGATTTGAAAAATCCTTTCTTTACATAATTCGGTGTACATTGGATATACTCATCTTCATCTTTTCCATTCTTTTCAAACCATACTGTTACAAAGGCATTCTCTCTATTTGAAGTTCCTCTTTCCAAGCTATCAAGAGTATTAATTGAATTCTCAATAGTATACCAATCTGTGAATGTATCATCTCTATCTTCTGTCCTATATTTTAAAATTTCAATATTTTTTGGATATATTACTTCACTACTTTGTGGATTATATACACCTATTTTGTATTCATCAGCAAGAGAAATTATATAACTGATAGCCTCATCAGCAACTGAATAGTCAAGTGCACAAAACACTCCATATTTTCCTAATGAGTAATCAGTCAAATGTGTTTCAGAGTTCTTTGAAGTAAAAGCTATTTCATCTAAATGTAGGTGTTTTCCATTTACTGGTGGAAATTTTTCAAACATTTTTTTAGCAAACTTCACTATTGTTTCAGAGCACCCTTCAAGTGAGTTATAATCTTCTTCTTCTTCATATTTAGTAAATTCTTCTATATAATTATTTATATCTATTGATGTTTTTATATTTTCCCTTCTTTCAAAAATAAATAAATTAAAACTCATCCTATGTCCTCCCTAAAATCAATTTTATATAAAATTTATTACCATTTTAGATGTATAATTAATGCTTGTCTTTTACTATCAGCAATTTTCATAAATAGTTTAGTTATAAAATTAAGTTTTTTTCTAAGAAGTTCTCTAGCATCTTTAAAAAAGGTAAGCTCTTCCACTAATATAGTATCTGTTTTTTTGGAAAAGTCAACACTATCCTCAATATAGAAATGCATTAATGCTTCTAGGTTTCCAGTTCTCCTAATATACCAATTAGCAAATCTTAATCCAGTTTTTTTCCTTGCAGTATCAAAAACTAACTCACCATAAGGAAATTCTTTTTTTAAATTTTTAATAAATTCAATAATCTTATCTTCAAAAAAATATTGAAATACGCCTGAAACAATTAAAAGTGTCGGTATAGAGGTATCAATTTGCTCTTTCCATTCCATTTCAAACATATCCCCAGCTATTAATGTTTCTTGTTTTCTTTCACCAAAATATTTTTTACGAATTTCAATTACCTCTGGAAGATCTATACCATAATAATTTACTTCTCCTAGTCCACATTTTTGAGTTATACGATCATAAGCTGTTTCTAAACCTATTCCTAGTAAAATAATATTAGATATTTTATGTTCTTCAATAAATTTAATTATCATCTTATCCATATTATAGTATCTAGCACCATAAGCCATATTTGTATATTCAAAACTGCCTTTGGAAATACCTGATGTAAATTTCTCTTCTATTTTTAATGCCATTTCATCATAAAAATATTCTGGAAATTTTTTTGACACATAAATTCTCCCATATAATGGTACATATAATGTATTAGCTACTCCATCTAATTTTTCCATAGGCTATCCTCCTTAAAACTTATTTAATTAACTGCTTTACAACTCTTGGTAATAATTTCCATTCTCTTTCTAAGACTATTTTTTGTATTTCTTCAGGAGATTTTGCCATACTGATATCAACTTTATCTTGTGCAATGATTTCACCAGCATCAACATTTGAAGTTACATAATGTACTGTACAACCACTTTCTTTATCTCCATTTTCAAATACTGCTTGATGAACTTTTAAACCATACATTCCTTTCCCTCCATATTTTGGAAGTAATGAGGGGTGTATATTTATAATTTTATTCTTATATTTTTCTAAAATTTCTCCATCTAATATAGATAAAAATCCTGCCAATACAATTAAATCAGGTTTTCTTTTTTCAAATATTTTTAATAAATTTTTAGAAATTTCTTTATCTCTATTTAAAAGAACAAAATCAATCTTATATTCATCTGCAATATTTTTTGCCTTACATTCTCTATCAGCAATTATACAATCTATTTTTACATCATTTTTTATCAGTTGCAACATATTAGTTCCACTACCAGATACTAACACTATTATTTTAAACATAAAGAATGATCTCCTTTTTCAATATGCCCTATTTCATAAGCTGTTTCTCCTAATGAAGTTAATAATTCAATGATAGTTTCAACATCTTTTTCTTCTACTACTAAAGTAAAACCTACTCCCATATTGAAAGTTCCAAATAATTCTTCTTCCTTTATTTTACTTCTTTCAGCAATTAACTTAAATATTTCAGGAACTCTTACCTTATCTTTAAATACAACTGGAGATAAATTTTTTCCCATACAACGAGGTAAATTTTCAAATAAACCTCCACCTGTTATATGTGCCATACCATTTACATTAAATTTTTCTAAAACTTTTAATATAGGTTTTACATAAATTTTTGTAGGAGTTAATAAAACATCTCCCATAGTTACATTTTCTCCATATTCTTTCAAAAAGATTTTTTCATTATAGTCAGTAAATACTTTTCTTACTAATGAATATCCATTGCTATGAAAACCACTTGAAGCTACTGCTATTATCTTATTTCCTTCTTTAACTTTTGAACCATCTATTAAATCTTCTTTTTCAACTATTCCAACACAGAAGCCTGCTATATCATAGTCACCTTCTTTATAAAAACCTGGCATTTCAGCAGTTTCTCCCCCTACTAAAGCTGCATAAGATTGTAAACAACCTTCTGTAACTCCTGAAACTAATTGTGCAGCAACTTCTGCATCAAGTTTTCCACAAGCTAAATAATCTAAGAAAAATAATGGTTTAGCTCCGTGACATAATACATCATTTACACACATAGCAACACAGTCTATTCCAACTGTATCATATTTTTTTTGCTTCATAGCAATTTCTAATTTTGTTCCAACCCCATCAGTTCCAGAAATTAAAACAGGATTTTTATATTGTCCTAATTCATACATAGCTCCAAAGCTACCTAAATTTGTTAGAACAGATTTATTATGAGTTTTCAAAACATTTTTCTTCATTAATTCAACTGCTTTGTATCCTTCTTCTTTATCAACACCTGAATCTTTATAAGAATTTATCATTATTCATCCTCCTTAAAGCAACCCATATAAAAATCTTCTCCACCATTTAAAATTTTCTTTAAATTTTTTAATGAAAGATAGTCCAATGTTGTTGCTCCTATTACTTTTCTAATTTCTTCAATACTCATATAGCTTCCCATTAACTTATTATTAGGATCTATATTTACTCCAAAATATGATTCTTCAATAACAACTGGTGAAGCTGATCTAAAGTGAACTTCTTTTGCTCCTGCTTCAAATAAAATATCTATTAATTTTTTAGAAGTTGTTCCACGAACAATAGAGTCATCTATAACTACAACTCTTTTTCCCTTAATTAATTCTTTAATAGGATTCAATTTAACTTTTACTGCTCTCTCTCTCAATTCTTGTACAGGAGCAATAAATGTTCTACCTACATATTTATTTTTTAAAAGTGCTGCTGAATAGGGTATTCCACTTGCTTCAGAATATCCTATTGCTGCTGGAACACCTGAATCAGGAACACCAATAACAATATCAGCTTCTATCGGATTTTGTTCATATAAGCATTTTCCCGTTTGATGTCTAAAATCGTAAACACTAATTCCATCTATAACACTATCTGGTCTTCCAAAATAAATATATTCAAATGAACTTGCTTTTTTACTACTTTCCTTATATTTTATGCTTTCCACTCCATTGTCATCTATAACTACCATTTCTCCTGCTTCTATATCTCTCACAAATTCTGCACCAATAGCATCTAATGCACAAGTTTCAGAAGCCAGAACATACATATCATTTTCAACTATTCTACCTAGACATAATGGTCTTAATCCTTCAGGATCACGAACTCCTATAAGTTTATCATTTATTATTATTCCAAGAGTAAAACAACCTTTTAATTTTTTAACTGTTTTTAAAACTGCTTCTTTATAACCATATTTACCATTGATACTTAAAAGTTTTAGTATAATTTCAGTATCTATTGCTGTTTGGAATAAAGAACCATTGTTTAATAATTCTTGTTTCAATTCAGCTTGATTTGATATGTCACCATTATGTACAAGAGATATATAACCCATAGCAGATTCTCCACCAACAGGTTGACAATTTCTTGAAGAAACTGTATTTTTACTACCATATCTTGTATGAGCTATTAAGATAGTTCCAATAAATTTTTGAAAATCTTCAACTTTAAATACATCTGATACAAGTCCTACATTTTTAATAGTTTTTATTCTTACTTCATTATTAGTTTTAGAGTCACAGATAGTATATCCTGCTCCTGCTTGTCCTCTATGTTGTAAAGCATACATTCCATAATATGCGATTCCCACTAAATCATTTCTAACTTTTTTTGAATGTAAAGCTAATATTCCCATTTCTTATTAATACTCCTTTTTTGTAATAGCCTCTACAATTTTTATTATTTCTTTTCAGTTAATCTTTTAACTACTTCTATATATGCTTCTTCTATGTTTCCTAAATCTCTTCTGAATCTATCTTTATCTAATTTTTCTCCTGTTTTCTTATCCCATAATCTACAAGTATCAGGAGTAATTTCATCAGCAAGTAAAATTTCACCCTTAGAATTTTTACCAAATTCAATTTTAAAATCTACTAATGTTATTCCAATATTATCAAATTTTTCTTTTAAAAGATTATTAATTTTTCCAGTTATATCATAAATTTCTTTTAATTCATCATAAGTTGCAAGTCCCATTGCTACTGCATGATGGTCATTTATTAAAGGATCTCCATATTCATCATTTTTATAACAAATTTCAAATATAGTATTACTTATTTTAGTTCCTTCTTTTATTCCAACTCTTTTAGCCATAGAACCAGCTATTATATTTCTAACTATTACTTCAAGAGGAAATATTTTTACTCTTTGACATAATTGATCTCTATCATTTAACTTTTTTACAAAATGAGTTTTTATTCCATGTTCTTCTAACATATTAAATATTAGAGCTGTTATTTCATTATTCATTATCCCCTTATTGTGAATAGTTCCTTTTTTTGCTCCATTTCCTGCTGTTGCATCATCTTTATAGTGAACAATAACTAAATCCTTATCATCAGTTTCATATAATTGTTTTGCTTTTCCTTCATAAATAAATTTTCCTTTTTCCATCTCTATTTCCTCCTAGTTTTTAAATAAAAATATTTATTTTAGCTAATTTTATAAAGAAAATAAATGAGTTACAATTGTAGATTTTAAGTAAAAAATTAAATAGAATGAGCCGAACAAATCTCGGCTGAAGCCAACTTGTTGGCAAGTTTGCCGAATTTGTAGCGAATTATTAATTTTTTACTGTTAAGAAATCTACTTAGTAACGAATTATTTTCTTTGTTTTCATTACAATTCCATATATATATTTTTTTTGAAATCTTCTTTCATTTCTTTTCTAAACTCTAAAAGTTTTGCTCTTAATTCTTTATTTCCAACTGCTAATATTTCTACTGCTAACATTCCTGCATTATATGAATTATTAATTGCCACAGTTGCAACAGGAATTGATTTAGGCATTTGTACTATTGAAAATAGTGCATCTAAACCTTCTACTGCTGCTTTTATAGGTACTCCAATCACAGGTAAAACAGTTTTTGAAGCAATAACTCCTGGTAAATGTGCTGCAAGTCCTGCTCCAGCAATGATAACTCCATAGTCTTCTTTTTCAAATTTTTCCAAAGTTTCTTCTAAAAGTTCTGGAACTCTATGTGCAGATAAAACATGTGCAGAATACTCTATCCCAAACTTTTTTAAACAGTCTGCTGCTCCCTTCATTACATCAACATCTGATTTACTACCAAATATAATTCCTACTTTCAT
Protein sequences of DBSCAN-SWA_2 >NC_003454|1634226:1641757|1637404_1637947_-|NP_603882.1|DBSCAN-SWA MFKIIVLVSGSGTNMLQLIKNDVKIDCIIADRECKAKNIADEYKIDFVLLNRDKEISKNLLKIFEKRKPDLIVLAGFLSILDGEILEKYKNKIINIHPSLLPKYGGKGMYGLKVHQAVFENGDKESGCTVHYVTSNVDAGEIIAQDKVDISMAKSPEEIQKIVLEREWKLLPRVVKQLIK >NC_003454|1634226:1641757|1637934_1638954_-|NP_603883.1|DBSCAN-SWA MINSYKDSGVDKEEGYKAVELMKKNVLKTHNKSVLTNLGSFGAMYELGQYKNPVLISGTDGVGTKLEIAMKQKKYDTVGIDCVAMCVNDVLCHGAKPLFFLDYLACGKLDAEVAAQLVSGVTEGCLQSYAALVGGETAEMPGFYKEGDYDIAGFCVGIVEKEDLIDGSKVKEGNKIIAVASSGFHSNGYSLVRKVFTDYNEKIFLKEYGENVTMGDVLLTPTKIYVKPILKVLEKFNVNGMAHITGGGLFENLPRCMGKNLSPVVFKDKVRVPEIFKLIAERSKIKEEELFGTFNMGVGFTLVVEEKDVETIIELLTSLGETAYEIGHIEKGDHSLCLK >NC_003454|1634226:1641757|1640344_1641058_-|NP_603885.1|DBSCAN-SWA MEKGKFIYEGKAKQLYETDDKDLVIVHYKDDATAGNGAKKGTIHNKGIMNNEITALIFNMLEEHGIKTHFVKKLNDRDQLCQRVKIFPLEVIVRNIIAGSMAKRVGIKEGTKISNTIFEICYKNDEYGDPLINDHHAVAMGLATYDELKEIYDITGKINNLLKEKFDNIGITLVDFKIEFGKNSKGEILLADEITPDTCRLWDKKTGEKLDKDRFRRDLGNIEEAYIEVVKRLTEKK >NC_003454|1634226:1641757|1635766_1636537_-|NP_603880.1|DBSCAN-SWA MSFNLFIFERRENIKTSIDINNYIEEFTKYEEEEDYNSLEGCSETIVKFAKKMFEKFPPVNGKHLHLDEIAFTSKNSETHLTDYSLGKYGVFCALDYSVADEAISYIISLADEYKIGVYNPQSSEVIYPKNIEILKYRTEDRDDTFTDWYTIENSINTLDSLERGTSNRENAFVTVWFEKNGKDEDEYIQCTPNYVKKGFFKSKILIDKYYFEVMIDKKLYQTNVSDKKDLIRLMKEWCCERKNPDVKNYEIIMEL >NC_003454|1634226:1641757|1634226_1635741_-|NP_603879.1|DBSCAN-SWA MRKRALISVYDKTGILDFAKFLVSKGIEIISTGGTYKYLKENNIEVIEVSKITNFEEMLDGRVKTLHPNIHGGILALRDNEEHMRTLKERNIDTIDYVIVNLYPFFEKVKEDLSFEEKIEFIDIGGPTMLRSAAKSFKNVVVISDVKDYESIKEEINKSDDVSYEARKKLAGKVFNLTSAYDAAISQFLLDEDFSEYLNISYKKFMEMRYGENSHQKAAYYTDNMTDGAMKDFKQLNGKELSYNNIRDMDLAWKVVSEFDEICCCAVKHSTPCGVALGDNVEGAYKKAYETDPVSIFGGIVAFNREVDEATAKLLNEIFLEIIIAPSFSKAALEILTKKKNIRLIECKNKPSDKKELIKVDGGILIQDTNNKLYEDLEVVTKAKPTSQEEKDLIFALKVVKFVKSNAIVVAKNLQTLGIGGGEVSRIWAAEKALERAKERFNATDVVLSSDAFFPFKDVIELAAKNGVKAIIQPSGSVNDKDSIEECDRNNISMIFSKLRHFKH >NC_003454|1634226:1641757|1636575_1637385_-|NP_603881.1|DBSCAN-SWA MEKLDGVANTLYVPLYGRIYVSKKFPEYFYDEMALKIEEKFTSGISKGSFEYTNMAYGARYYNMDKMIIKFIEEHKISNIILLGIGLETAYDRITQKCGLGEVNYYGIDLPEVIEIRKKYFGERKQETLIAGDMFEMEWKEQIDTSIPTLLIVSGVFQYFFEDKIIEFIKNLKKEFPYGELVFDTARKKTGLRFANWYIRRTGNLEALMHFYIEDSVDFSKKTDTILVEELTFFKDARELLRKKLNFITKLFMKIADSKRQALIIHLKW >NC_003454|1634226:1641757|1638953_1640300_-|NP_603884.1|DBSCAN-SWA MGILALHSKKVRNDLVGIAYYGMYALQHRGQAGAGYTICDSKTNNEVRIKTIKNVGLVSDVFKVEDFQKFIGTILIAHTRYGSKNTVSSRNCQPVGGESAMGYISLVHNGDISNQAELKQELLNNGSLFQTAIDTEIILKLLSINGKYGYKEAVLKTVKKLKGCFTLGIIINDKLIGVRDPEGLRPLCLGRIVENDMYVLASETCALDAIGAEFVRDIEAGEMVVIDDNGVESIKYKESSKKASSFEYIYFGRPDSVIDGISVYDFRHQTGKCLYEQNPIEADIVIGVPDSGVPAAIGYSEASGIPYSAALLKNKYVGRTFIAPVQELRERAVKVKLNPIKELIKGKRVVVIDDSIVRGTTSKKLIDILFEAGAKEVHFRSASPVVIEESYFGVNIDPNNKLMGSYMSIEEIRKVIGATTLDYLSLKNLKKILNGGEDFYMGCFKEDE >NC_003454|1634226:1641757|1641283_1641757_-|NP_603886.1|DBSCAN-SWA MKVGIIFGSKSDVDVMKGAADCLKKFGIEYSAHVLSAHRVPELLEETLEKFEKEDYGVIIAGAGLAAHLPGVIASKTVLPVIGVPIKAAVEGLDALFSIVQMPKSIPVATVAINNSYNAGMLAVEILAVGNKELRAKLLEFRKEMKEDFKKNIYMEL |
8 | Prochlorococcus_phage(33.33%) | NA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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