CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_004431	Escherichia coli CFT073, complete sequence	2 crisprs	cas14j,DinG,cas3,DEDDh,csa3,c2c9_V-U4,WYL	0	1	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_004431_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_004431_1

2634059-2634172

Orphan

Consensus_repeat	Method
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_004431_1

>merge|NC_004431|1|2634059-2634172|CRISPRCasFinder
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCACTGGATGCCCAGATGCGGCATGAACGCCCTACCCAGCCTACGATGCGGTTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA

>NC_004431|1|1|2634059-2634172|CRISPRCasFinder
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	CTGGATGCCCAGATGCGGCATGAACGCCCTACCCAGCCTACGATGCGG
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_004431.1\|WP_000332036.1\|2634196_2635327_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NC_004431.1\|WP_001104503.1\|2615000_2616650_-\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NC_004431.1\|WP_001281253.1\|2623645_2626273_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NC_004431.1\|WP_001297934.1\|2621188_2621812_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NC_004431.1\|WP_016265893.1\|2627281_2631040_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NC_004431.1\|WP_000301034.1\|2635634_2636285_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NC_004431.1\|WP_001209933.1\|2640817_2642077_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NC_004431.1\|WP_000140607.1\|2643456_2644383_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NC_004431.1\|WP_000536596.1\|2616650_2621165_-\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NC_004431.1\|WP_001225880.1\|2614219_2614996_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NC_004431.1\|WP_000012318.1\|2621808_2623497_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NC_004431.1\|WP_000992976.1\|2644423_2645227_-\|2-keto-3-deoxy-L-rhamnonate-aldolase	unknown	unknown	gnl\|CDD\|182257
NC_004431.1\|WP_001000377.1\|2642073_2643264_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NC_004431.1\|WP_000779093.1\|2636487_2637564_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NC_004431.1\|WP_000786563.1\|2612961_2614146_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NC_004431.1\|WP_000948732.1\|2637568_2638927_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NC_004431.1\|WP_000857226.1\|2639199_2640828_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NC_004431.1\|WP_001075170.1\|2631721_2634007_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NC_004431.1\|WP_000990760.1\|2626419_2627142_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NC_004431.1\|WP_000135040.1\|2635326_2635581_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668

Protein	Function_ID	Function_description	E-value
NC_004431.1\|WP_000332036.1\|2634196_2635327_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NC_004431.1\|WP_001104503.1\|2615000_2616650_-\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.66557e-125
NC_004431.1\|WP_001281253.1\|2623645_2626273_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NC_004431.1\|WP_001297934.1\|2621188_2621812_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	4.78627e-139
NC_004431.1\|WP_016265893.1\|2627281_2631040_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NC_004431.1\|WP_000301034.1\|2635634_2636285_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.02722e-157
NC_004431.1\|WP_001209933.1\|2640817_2642077_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NC_004431.1\|WP_000140607.1\|2643456_2644383_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NC_004431.1\|WP_000536596.1\|2616650_2621165_-\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NC_004431.1\|WP_001225880.1\|2614219_2614996_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	2.9978e-151
NC_004431.1\|WP_000012318.1\|2621808_2623497_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NC_004431.1\|WP_000992976.1\|2644423_2645227_-\|2-keto-3-deoxy-L-rhamnonate-aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	0
NC_004431.1\|WP_001000377.1\|2642073_2643264_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NC_004431.1\|WP_000779093.1\|2636487_2637564_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NC_004431.1\|WP_000786563.1\|2612961_2614146_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NC_004431.1\|WP_000948732.1\|2637568_2638927_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NC_004431.1\|WP_000857226.1\|2639199_2640828_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NC_004431.1\|WP_001075170.1\|2631721_2634007_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NC_004431.1\|WP_000990760.1\|2626419_2627142_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	3.80247e-169
NC_004431.1\|WP_000135040.1\|2635326_2635581_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53

>NC_004431.1|WP_001075170.1|2631721_2634007_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NC_004431.1|WP_016265893.1|2627281_2631040_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIISLRKEYLSLLPSMIASLFSANGAAAVIDSCQGYDIKANCQASRQSLSGNMQDWSIADGQWLIFSGMANNASGGAVFLQHSAEFTISPQNETGMTLFADNSVSGEYNNGGAIFAKENSTINLANVIFDSNVAGGYGGAIYSAGTNDTGAADLRVTNAVFHNNIANDGKGGAIYTINNDVYLSDDAFNNNQAYTSTSYSDGDGGAIDVTDNSTDNTHLSGKTIINNTSFTNNYAEGYGGAIYTSSTTSPYLIDISVDDNYDQNNGVMIDENNSASGYDHSATAAAGGFMYIGHSVAEFNIAADKTLVIGNTSNDGAIDSLAGTGVIVKEGAGELVLNADNNAFTGEMSIQNGEVTLGRSDELMNVGDTHCQSDPQDCFGLMVGSTVHSEYQAELNVGNTQQTFVHSLTGFANGILNIDAGGNVTVNQGGFSGSIQGEGQLTVAQDGSYLLTGAQSMALTGDIVVEDNAVLSLAGNQADLRAMQSDPQSIVLNGGVLDLSDFTTWDGDSSYNDGLQISGSGGTVIGSNDVVDISSGDDLHIGGSDASQNGVYVVINAGDQRVTLANNNGYLGNTQIASGTLEVSDNSQLGDTSYNRSVIFTDPQQHSEMDVTTDVDTRSATTGQGRNIEMRADGEIHVEDGVDTQWGGLMADSTGQQLDSVSTLTKSGGGTLELTASGTATSAVRVEDGTLKGEAENIIPYVSSLWVGEDGVFETGQNQDIRSIDATSGGDIDITDGTVLRLTQQDTNQALDASLFSGDGTLVNATDGVTLAGELNTNLETDSLTYLSDVTVNGNLTNTSGAISLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSASDQLVLNGNTAGNTAVVINPITGIGEPTSTGIKVVDFAADPAQFQNNAQFSLTGSGYVNMGAYDYTLVEDNNDWYLRSQEVNPTPPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYFNNLRAANQAFVMERRDHAGGDGQTLNLRVIGGRYHYTAVGQLAQHEDTSTVQLSGNLFSGHWGDDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGVDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVSVTPTLDLNYYHDPHATEIEEDGSTISDDAAKQRGEIKVGITGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NC_004431.1|WP_000990760.1|2626419_2627142_+|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASHWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVVQTSLKERHMTGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NC_004431.1|WP_001281253.1|2623645_2626273_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NC_004431.1|WP_000012318.1|2621808_2623497_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPKKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRWETRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGRCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMVDVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NC_004431.1|WP_001297934.1|2621188_2621812_-|DUF1175-domain-containing-protein
MRHGLLVLICWLYCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANEALKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYIIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NC_004431.1|WP_000536596.1|2616650_2621165_-|alpha-2-macroglobulin-family-protein
MGTGLANADDSLPSSNYVPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGKQEPGLYLVEAIVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKTGSEILWTDGLGVMTRGVTDGSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRKQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDDNGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGELVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTSHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKSLYMKWSMPTVYRMGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALTLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGVRFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTSDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEYWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEIMLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAGKQQGQLLEKARNEMGELAYMLPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAPGSEWTGMQVK
>NC_004431.1|WP_001104503.1|2615000_2616650_-|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSALPDTLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIDVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWATGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVLVDLFARYPLKKVTEEKSTTAFKPGVLNGRYRVTFANGNHMTFVSHGETTLLTVKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRVTEGTLSWRHATAQAGQGERYDQILAFAYPDNNLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NC_004431.1|WP_001225880.1|2614219_2614996_-|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQTINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGAGAIRARLRLVLSWDTDNTDLDLHVVTPDGEYAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NC_004431.1|WP_000786563.1|2612961_2614146_+|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSTIDLGATVIKAAIERAKIDSLHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESSALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFEPEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NC_004431.1|WP_000332036.1|2634196_2635327_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>NC_004431.1|WP_000135040.1|2635326_2635581_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NC_004431.1|WP_000301034.1|2635634_2636285_-|lipopolysaccharide-kinase-InaA
MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKVEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NC_004431.1|WP_000779093.1|2636487_2637564_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNVLEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NC_004431.1|WP_000948732.1|2637568_2638927_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NC_004431.1|WP_000857226.1|2639199_2640828_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGINAEAIEPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGEIQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEATLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NC_004431.1|WP_001209933.1|2640817_2642077_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYTLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLIIDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFVVLASGSFFSGGLVAERDGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHVAQQIAQRAGGQQ
>NC_004431.1|WP_001000377.1|2642073_2643264_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NC_004431.1|WP_000140607.1|2643456_2644383_+|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSEGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGEASPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
>NC_004431.1|WP_000992976.1|2644423_2645227_-|2-keto-3-deoxy-L-rhamnonate-aldolase
MNALLTNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRVKGSY

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Crispr_ID: NC_004431_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_004431_2

5103218-5103357

Orphan

Consensus_repeat	Method
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_004431_2

>merge|NC_004431|2|5103218-5103357|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACAGCCTTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

>NC_004431|2|2|5103218-5103357|CRISPRCasFinder
TGTGTAGGTCGGATAAGGCGTTCACGTCGCATCCGACAATAACA	GCCTTGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACGAGTTCAGTGC
TGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAATAACA

Protein	Signature genes	Signature genes Name	Protein_function
NC_004431.1\|WP_000896740.1\|5113559_5114123_+\|gluconokinase	unknown	unknown	gnl\|CDD\|182097
NC_004431.1\|WP_000042801.1\|5107494_5108997_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NC_004431.1\|WP_000002950.1\|5097292_5097709_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NC_004431.1\|WP_000416368.1\|5099817_5102673_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NC_004431.1\|WP_001128336.1\|5110139_5111459_-\|gnt-II-system-L-idonate-transporter	unknown	unknown	gnl\|CDD\|129873
NC_004431.1\|WP_000235828.1\|5091760_5092765_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
NC_004431.1\|WP_001298046.1\|5090300_5091704_-\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NC_004431.1\|WP_001346533.1\|5093731_5094952_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NC_004431.1\|WP_000397144.1\|5103373_5104885_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NC_004431.1\|WP_001197423.1\|5112311_5113343_-\|L-idonate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|182130
NC_004431.1\|WP_000584114.1\|5105151_5106252_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NC_004431.1\|WP_024182262.1\|5114126_5115146_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NC_004431.1\|WP_001304655.1\|5109074_5110073_-\|DNA-binding-transcriptional-regulator-IdnR	unknown	unknown	gnl\|CDD\|380489
NC_004431.1\|WP_001298035.1\|5097886_5098390_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_004431.1\|WP_001295681.1\|5106251_5107334_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NC_004431.1\|WP_000428627.1\|5092788_5093721_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
NC_004431.1\|WP_000635216.1\|5095629_5096082_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NC_004431.1\|WP_000012936.1\|5096126_5097131_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NC_004431.1\|WP_000998695.1\|5111523_5112288_-\|gluconate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|181225
NC_004431.1\|WP_000786399.1\|5102672_5103116_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581

Protein	Function_ID	Function_description	E-value
NC_004431.1\|WP_000896740.1\|5113559_5114123_+\|gluconokinase	gnl\|CDD\|182097	PRK09825, idnK, gluconokinase.	2.59086e-125
NC_004431.1\|WP_000042801.1\|5107494_5108997_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NC_004431.1\|WP_000002950.1\|5097292_5097709_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	7.57352e-69
NC_004431.1\|WP_000416368.1\|5099817_5102673_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NC_004431.1\|WP_001128336.1\|5110139_5111459_-\|gnt-II-system-L-idonate-transporter	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NC_004431.1\|WP_000235828.1\|5091760_5092765_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NC_004431.1\|WP_001298046.1\|5090300_5091704_-\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NC_004431.1\|WP_001346533.1\|5093731_5094952_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NC_004431.1\|WP_000397144.1\|5103373_5104885_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NC_004431.1\|WP_001197423.1\|5112311_5113343_-\|L-idonate-5-dehydrogenase	gnl\|CDD\|182130	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional.	0
NC_004431.1\|WP_000584114.1\|5105151_5106252_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NC_004431.1\|WP_024182262.1\|5114126_5115146_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	5.57714e-168
NC_004431.1\|WP_001304655.1\|5109074_5110073_-\|DNA-binding-transcriptional-regulator-IdnR	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	1.9949e-108
NC_004431.1\|WP_001298035.1\|5097886_5098390_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.51706e-18
NC_004431.1\|WP_001295681.1\|5106251_5107334_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NC_004431.1\|WP_000428627.1\|5092788_5093721_-\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
NC_004431.1\|WP_000635216.1\|5095629_5096082_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	4.82284e-65
NC_004431.1\|WP_000012936.1\|5096126_5097131_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NC_004431.1\|WP_000998695.1\|5111523_5112288_-\|gluconate-5-dehydrogenase	gnl\|CDD\|181225	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional.	0
NC_004431.1\|WP_000786399.1\|5102672_5103116_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66

>NC_004431.1|WP_000786399.1|5102672_5103116_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NC_004431.1|WP_000416368.1|5099817_5102673_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDIYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NC_004431.1|WP_001298035.1|5097886_5098390_-|GNAT-family-N-acetyltransferase
MNVVASPALRLRKLTVADNPAIAHVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL
>NC_004431.1|WP_000002950.1|5097292_5097709_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGDDGDDEDFVDEDDDGIRH
>NC_004431.1|WP_000012936.1|5096126_5097131_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSKMMALTGNSQVKFLHCLPAFHDEQTTLGKKMAAEFGLYGGMEVTDEVFESPASIVFDQAENRMHTIKAVMVATLAK
>NC_004431.1|WP_000635216.1|5095629_5096082_+|YhcH/YjgK/YiaL-family-protein
MIVGNIHHLQSWLPEELREAIEYIKSHVSDETAKGKHAIDGDRLFYLISEDTTEPGELRRAEYHARYLDIQIVLKGQEGMTFSTQPAGVPETDWLADKDIAFIGQGIDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKLLKS
>NC_004431.1|WP_001346533.1|5093731_5094952_-|arginine-deiminase
MEKHYVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLSVERAGEEHDIFANTLRQQGIEVLLLTDLLTQTLDIPEAKSWLLETQISDYRLGPTFATDVRTWLAEMSHRDLARHLSGGLTYSEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDTSCWIYNGVSINPMAKPARQRETNNLRAIYRWHPQFAGGEFIKYFGDENINYDHATLEGGDVLVIGRGAVLIGMSERTTPQGIEFLAQALFKHRQAERVIAVELPKHRSCMHLDTVMTHIDIDTFSVYPEVVRPDVNCWTLTPDGHGGLKRTQESTLLHAIEKALGIDQVRLITTGGDAFEAEREQWNDANNVLTLRPGVVVGYERNIWTNEKYDKAGITVLPIPGDELGRGRGGARCMSCPLHRDGI
>NC_004431.1|WP_000428627.1|5092788_5093721_-|carbamate-kinase
MENKPTLVIALGGNALLKRGEPLEAEIQRKNIDLAAKTIAQLTQHWRVVLVHGNGPQVGLLALQNSAYAHVAPYPLDILGAESQGMIGYMLQQALKNQLPQREISVLLTQVEVDANDPAFSNPTKYIGPIYDHAQTQVLQAEKGWVFKADGHSFRRVVPSPQPKRIVERDAIQTLIAHDHLVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQIHADALLILTDADAVYLDWGKPTQRPLAQVTPELLNEMQFDAGSMGPKVTACAKFVSQCRGIAGIGSLADGPEILAGDKGTLIRLDTPHNHA
>NC_004431.1|WP_000235828.1|5091760_5092765_-|ornithine-carbamoyltransferase
MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQGAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGEPKEAWAERVSLMAPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTEEVFESAHSIVFDEAENRMHTIKAVMVATLGD
>NC_004431.1|WP_001298046.1|5090300_5091704_-|YfcC-family-protein
MGKFKFPTAYTILFVLIALVAAMTWIVPAGKYQMVTNAALGKEVPVAGTYAPVEAQPQGITAVLLAPIDGLYNHQTYTAGAIDVALFVLIIGGFLGVVNKTGAIDAGIERVTTRLNGREEWMIPILMALFAAGGTIYGMAEESLPFYTLLVPVMMAARFDPLVAAATVLLGSGIGTLGSTINPFATVIAANAAGIPFTQGILLRVILLLVGYVICVYWVMRYARKVRNSPESSIVADKMAENQAHFLGNRSETMLEFTPTRKAILILFAASFAFMIYGVAVLGWWMAEISAVFLAAAVIVGVIARMGEETFTSTFIDGARDLLGVALIIGIARGIVVVMDNGMITHTILHSAENLVSGLSTTVFINVTYWLEVLLSFLVPSSSGLAVLTMPIMAPLADFAHVQRDLVVTAYQSASGVVNLITPTSAVVMGGLAIARVPWVRYLRWVAPLLLILTMLNMIVLSIAAMI
>NC_004431.1|WP_000397144.1|5103373_5104885_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NC_004431.1|WP_000584114.1|5105151_5106252_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NC_004431.1|WP_001295681.1|5106251_5107334_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NC_004431.1|WP_000042801.1|5107494_5108997_-|DUF853-domain-containing-protein
MSKPLLIARTLDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAAEGTASEKLLARLKNIGVNDWQPHTNPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHLFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRPNPTFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLVNHSPVYGKYEDDVDRESAYEMLQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>NC_004431.1|WP_001304655.1|5109074_5110073_-|DNA-binding-transcriptional-regulator-IdnR
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSVHNYQTLIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLDKRVRRKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDLDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL
>NC_004431.1|WP_001128336.1|5110139_5111459_-|gnt-II-system-L-idonate-transporter
MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGQYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH
>NC_004431.1|WP_000998695.1|5111523_5112288_-|gluconate-5-dehydrogenase
MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV
>NC_004431.1|WP_001197423.1|5112311_5113343_-|L-idonate-5-dehydrogenase
MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSKLHEGQTVAINPSKPCGHCKYCIEHNENQCTEMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLKGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF
>NC_004431.1|WP_000896740.1|5113559_5114123_+|gluconokinase
MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQDDEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE
>NC_004431.1|WP_024182262.1|5114126_5115146_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQNKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLPVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKTNDAIQHVRDGKARYRVVLKADF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12113-12164	10	0.808
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	272-323	10	0.808
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31252-31303	10	0.808
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4115-4166	11	0.788
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4114-4165	11	0.788
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4114-4165	11	0.788
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4114-4165	11	0.788
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	152-203	11	0.788
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208982-209033	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	44-95	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219476-219527	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	43-94	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	18332-18383	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210310-210361	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	43-94	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191265-191316	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	43-94	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7393-7444	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84217-84268	12	0.769
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3373-3424	13	0.75
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3372-3423	13	0.75
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15000-15051	13	0.75
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3372-3423	13	0.75
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3372-3423	13	0.75
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	70-121	14	0.731
NC_004431_2	2.1\|5103262\|52\|NC_004431\|CRISPRCasFinder	5103262-5103313	52	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30159-30210	14	0.731

1. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
tcggtgcctgatgcgacgctggcgcgtcttatcaggcctacgagtcgcccgt	Protospacer
 *  ***************** ***********************.   .*.

2. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa-ccgttacc	Protospacer
 *  *************************************.*. .*. *.*

3. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.808

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc--	CRISPR spacer
tcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacag--ccgttgcca	Protospacer
 *  *************************************..  .*. ***

4. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

5. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

6. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

7. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
cagatgcctgatgcgacgctggcgcgtcttatcatgcctacaaactt-gtgcc	Protospacer
    ***************** ************ ******.*..*. ****

8. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 11, identity: 0.788

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ttgaagcctgatgcgacgctgacgcgtcttatcaggcctacnagacccgagc	Protospacer
 .   **************** ******************* ** .* * **

9. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

10. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

11. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

12. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

13. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

14. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

15. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

16. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc----	CRISPR spacer
cagatgcctgatgcgacgctgacgcgtcttatcaggcctac----ccactgttttt	Protospacer
    ***************** *******************    .** **.

17. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc-	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaaatct-gtacg	Protospacer
 .  ***************** ************ ******.*.*.. **.*

18. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc---	CRISPR spacer
cggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa---actgcact	Protospacer
    ***************** ************ ******.*.   * ***

19. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 12, identity: 0.769

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc---	CRISPR spacer
cggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa---actgcact	Protospacer
    ***************** ************ ******.*.   * ***

20. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

21. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

22. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

23. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

24. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
caggtgcctgatgcgacgctggcgcgtcttatcatgcctacgagcccgcgaa	Protospacer
    ***************** ************ *********..*.  .

25. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 14, identity: 0.731

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ccgatgcctgatgcgacgctgacgcgtcttatcatgcctacggacctgaacc	Protospacer
 *  ***************** ************ *******.......  *

26. spacer 2.1|5103262|52|NC_004431|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 14, identity: 0.731

gccttgcctgatgcgacgctgtcgcgtcttatcaggcctacgagttcagtgc	CRISPR spacer
ctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaatctgcaccc	Protospacer
 .  ***************** ************ ******.* .*  .. *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

909331 : 981561

Salmonella_phage(70.83%)

head,terminase,capsid,portal,protease,tail,integrase,tRNA,plate,lysis

attL 908857:908883|attR 942338:942364

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
908857:908883	attL	NA	NA	NA	NA
WP_000290934.1\|909331_910363_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.9e-105	55.7
WP_000377448.1\|910449_911421_-	hypothetical protein	NA	NA	NA	NA
WP_001181139.1\|911433_912303_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	2.2e-30	39.2
WP_000188448.1\|912448_912670_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|912702_913212_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956179.1\|913219_913420_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000963473.1\|913383_913725_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_001244228.1\|913792_914026_+	DUF2732 family protein	E5G6L6	Salmonella_phage	6.4e-33	98.7
WP_000752622.1\|914025_914253_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_000104135.1\|914249_915107_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.3e-157	95.8
WP_000017614.1\|915103_917518_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_001154434.1\|917671_917860_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217564.1\|917870_918104_+	DinI family protein	E5G6M1	Salmonella_phage	8.0e-36	98.7
WP_001292590.1\|918324_918525_+	hypothetical protein	NA	NA	NA	NA
WP_000529102.1\|918528_919311_+	hypothetical protein	NA	NA	NA	NA
WP_000497736.1\|919533_920685_+	TIGR02391 family protein	NA	NA	NA	NA
WP_000520364.1\|920736_921771_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	2.4e-172	89.0
WP_001098423.1\|921770_923537_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.3
WP_000216253.1\|923679_924513_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	1.8e-122	90.3
WP_000742529.1\|924529_925588_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_000059199.1\|925591_926242_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	5.6e-111	95.4
WP_000673533.1\|926337_926802_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	2.4e-76	89.0
WP_000868175.1\|926801_927005_+\|tail	tail protein X	E5G6M9	Salmonella_phage	1.4e-31	92.5
WP_000171570.1\|927008_927224_+	hypothetical protein	E5G6N0	Salmonella_phage	1.4e-26	80.3
WP_001069913.1\|927204_927717_+	lysozyme	E5G6N1	Salmonella_phage	2.4e-88	92.3
WP_000727854.1\|927718_928096_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	5.1e-16	40.0
WP_001589059.1\|928092_928521_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	1.9e-46	75.9
WP_001039937.1\|928616_929048_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.3e-71	93.7
WP_000829121.1\|929040_929487_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	1.5e-62	85.6
WP_000993767.1\|929555_930134_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	4.2e-94	87.0
WP_000177399.1\|930130_930490_+	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	4.2e-52	86.6
WP_000268305.1\|930476_931385_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	6.6e-142	89.7
WP_001086846.1\|931377_931983_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	2.2e-109	91.5
WP_000104783.1\|931979_933419_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	3.6e-150	78.2
WP_000844320.1\|933421_933898_+\|tail	tail assembly chaperone	A0A0F7LDZ0	Escherichia_phage	1.4e-26	39.6
WP_000817508.1\|933881_934913_-	acyltransferase	NA	NA	NA	NA
WP_000046132.1\|935126_936299_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	2.3e-203	90.3
WP_001207660.1\|936308_936824_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
WP_001281009.1\|936878_937181_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
WP_000763311.1\|937195_937315_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
WP_001282781.1\|937307_940385_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	63.5
WP_000980398.1\|940381_940867_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	2.8e-67	80.6
WP_001011807.1\|940863_941964_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	3.5e-174	86.9
WP_000972391.1\|942054_942273_+	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_001024876.1\|942508_944194_-	aspartate:alanine antiporter	NA	NA	NA	NA
942338:942364	attR	NA	NA	NA	NA
WP_000681104.1\|944463_944841_+	inner membrane protein YbjM	NA	NA	NA	NA
WP_001195231.1\|944870_945128_-	glutaredoxin 1	A0A2I7SAE2	Vibrio_phage	7.8e-24	63.1
WP_001201570.1\|945287_945575_+	DUF1418 family protein	NA	NA	NA	NA
WP_000189167.1\|945558_946281_+	nitroreductase NfsA	NA	NA	NA	NA
WP_000684325.1\|946341_947244_+	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.0e-37	34.4
WP_000203025.1\|947331_947808_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_001443198.1\|948156_949269_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_000996031.1\|949363_950497_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	6.5e-30	34.0
WP_000105415.1\|950506_951451_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_001061658.1\|951447_952293_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_000389260.1\|952352_952841_+	YbjO family protein	NA	NA	NA	NA
WP_001149714.1\|952881_954009_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	1.3e-27	27.3
WP_001295905.1\|954037_954769_-	ABC transporter substrate-binding protein ArtJ	NA	NA	NA	NA
WP_000464491.1\|954994_955663_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_001001691.1\|955662_956379_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_000756575.1\|956385_957117_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000027205.1\|957134_957863_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	6.0e-29	36.7
WP_001298306.1\|958080_958596_-	lipoprotein	NA	NA	NA	NA
WP_001160737.1\|958721_959045_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_001255186.1\|959041_959872_+	N-acetylmuramoyl-L-alanine amidase AmiD	A0A1B0UZW5	Roseobacter_phage	5.7e-07	30.0
WP_001305933.1\|959868_960882_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_001136536.1\|960980_962411_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000566393.1\|962421_963423_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_000815365.1\|963459_965178_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	8.9e-31	24.0
WP_000178696.1\|965310_966279_-	NADH oxidoreductase	NA	NA	NA	NA
WP_000458843.1\|966290_967943_-	hydroxylamine reductase	NA	NA	NA	NA
WP_000491135.1\|968086_968986_-	L-lysine exporter LysO	NA	NA	NA	NA
WP_001298299.1\|969479_970175_-	aquaporin Z	NA	NA	NA	NA
WP_000599826.1\|970600_972259_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_001351020.1\|972255_973212_-	DUF535 domain-containing protein	NA	NA	NA	NA
WP_000746478.1\|973362_974478_+	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_000410785.1\|976494_976719_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
WP_000520781.1\|977041_977362_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
WP_000934041.1\|977392_979669_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
WP_001040187.1\|980353_980572_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_001241667.1\|980856_981561_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA

DBSCAN-SWA_2

1183571 : 1239935

Enterobacteria_phage(28.57%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000426105.1\|1183571_1184258_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001528902.1\|1184357_1184816_-	hypothetical protein	NA	NA	NA	NA
WP_001167423.1\|1185273_1185786_+	hypothetical protein	NA	NA	NA	NA
WP_001443206.1\|1186027_1186597_+	hypothetical protein	NA	NA	NA	NA
WP_011076307.1\|1186871_1187156_-	S/F1C fimbrial major subunit operon transcriptional regulator	NA	NA	NA	NA
WP_000046975.1\|1187511_1187841_+	S/F1C fimbrial major subunit operon transcriptional regulator	NA	NA	NA	NA
WP_000768217.1\|1188212_1188755_+	F1C fimbrial major subunit FocA	NA	NA	NA	NA
WP_000703304.1\|1188825_1189365_+	S/F1C fimbrial minor subunit SfaD	NA	NA	NA	NA
WP_000975445.1\|1189405_1190101_+	sfa/F1C fimbrial biogenesis chaperone	NA	NA	NA	NA
WP_001443207.1\|1190170_1192801_+	S/F1C fimbrial usher SfaF/FocD	NA	NA	NA	NA
WP_000237770.1\|1192813_1193341_+	S/F1C fimbrial adhesin minor pilin SfaG/FocF	NA	NA	NA	NA
WP_000767894.1\|1193362_1193866_+	F1C fimbria minor subunit FocG	NA	NA	NA	NA
WP_001304588.1\|1193816_1194827_+	F1C fimbrial protein subunit FocH	NA	NA	NA	NA
WP_000012016.1\|1195130_1195871_+	transcriptional regulator SfaY	NA	NA	NA	NA
WP_001445604.1\|1196017_1196569_+	HTH-type transcriptional regulator SfaX	NA	NA	NA	NA
WP_000950586.1\|1196894_1197932_-\|transposase	IS630-like element ISEc40 family transposase	NA	NA	NA	NA
WP_001222189.1\|1198161_1200339_+	siderophore salmochelin receptor IroN	NA	NA	NA	NA
WP_000271272.1\|1200383_1201340_-	catecholate siderophore esterase IroE	NA	NA	NA	NA
WP_000933673.1\|1201424_1202654_-	catecholate siderophore esterase IroD	NA	NA	NA	NA
WP_001111200.1\|1202757_1206417_-	salmochelin/enterobactin export ABC transporter IroC	W8CYL7	Bacillus_phage	3.6e-45	29.8
WP_001221122.1\|1206556_1207672_-	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	NA	NA
WP_000805228.1\|1208209_1208509_+	hypothetical protein	NA	NA	NA	NA
WP_000526115.1\|1208686_1209145_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_001528912.1\|1210403_1210688_+	hypothetical protein	NA	NA	NA	NA
WP_139371347.1\|1212503_1213717_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_001445605.1\|1214528_1216499_+	TonB-dependent receptor	NA	NA	NA	NA
WP_000977398.1\|1216517_1217309_+	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_001327488.1\|1217572_1218772_+	GTP-binding protein	NA	NA	NA	NA
WP_000516335.1\|1219722_1220859_+	SEL1-like repeat protein	NA	NA	NA	NA
WP_000997076.1\|1220894_1221437_+	hypothetical protein	NA	NA	NA	NA
WP_001304575.1\|1222375_1222735_-	hypothetical protein	NA	NA	NA	NA
WP_001304572.1\|1223810_1224107_-	hypothetical protein	NA	NA	NA	NA
WP_001069772.1\|1224406_1225279_+	GTPase family protein	NA	NA	NA	NA
WP_000820423.1\|1225609_1228729_+	autotransporter adhesin Ag43	NA	NA	NA	NA
WP_024182236.1\|1228849_1231366_+	hypothetical protein	NA	NA	NA	NA
WP_000581502.1\|1231441_1231897_+	hypothetical protein	NA	NA	NA	NA
WP_001234710.1\|1232307_1233129_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	2.2e-43	36.7
WP_000855076.1\|1233391_1233865_+	antirestriction protein	A0A2D0W9W4	Bordetella_phage	7.4e-12	33.1
WP_001186170.1\|1233880_1234357_+	RadC family protein	NA	NA	NA	NA
WP_000174402.1\|1234498_1235998_+\|transposase	IS21-like element ISEc10 family transposase	NA	NA	NA	NA
WP_000065240.1\|1235994_1236750_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.2e-33	33.9
WP_000692312.1\|1236835_1237057_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	8.5e-11	45.8
WP_000094915.1\|1237075_1237720_+	hypothetical protein	A0A2I6PI07	Pseudomonas_phage	7.2e-26	32.9
WP_000854739.1\|1238190_1238571_+	toxin	NA	NA	NA	NA
WP_001054232.1\|1238567_1239056_+	hypothetical protein	NA	NA	NA	NA
WP_000772027.1\|1239075_1239273_+	DUF957 domain-containing protein	NA	NA	NA	NA
WP_000526135.1\|1239476_1239935_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1311853 : 1446309

172

Enterobacteria_phage(45.53%)

head,transposase,terminase,capsid,holin,portal,protease,tail,integrase,tRNA,lysis

attL 1366441:1366458|attR 1449056:1449073

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000526135.1\|1311853_1312312_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_000179805.1\|1312427_1313060_-	TetR family copper-responsive transcriptional repressor ComR	NA	NA	NA	NA
WP_000800153.1\|1313300_1313558_+	multiple stress resistance protein BhsA	A0A1B2IFR9	Erwinia_phage	9.6e-06	37.1
WP_016265943.1\|1313639_1314602_-	L,D-transpeptidase LdtC	NA	NA	NA	NA
WP_000810242.1\|1318319_1319393_-	acyltransferase family protein	NA	NA	NA	NA
WP_000284714.1\|1319653_1320853_+	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA
WP_001033695.1\|1320845_1321547_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	1.9e-35	40.3
WP_001251365.1\|1321546_1322791_+	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA
WP_000291305.1\|1322819_1323731_+	N-acetylglucosamine kinase	NA	NA	NA	NA
WP_000952746.1\|1323746_1324568_+	NAD-dependent protein deacylase	A0A2I7S9Y2	Vibrio_phage	5.6e-23	35.6
WP_000723290.1\|1324705_1325494_-	TPM domain-containing protein	NA	NA	NA	NA
WP_001443234.1\|1325490_1325952_-	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_000759310.1\|1326009_1327056_-	spermidine/putrescine ABC transporter substrate-binding protein PotD	NA	NA	NA	NA
WP_000580316.1\|1327052_1327847_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
WP_000074984.1\|1328013_1329132_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	5.9e-84	44.2
WP_000003742.1\|1329100_1329370_-	excisionase	NA	NA	NA	NA
WP_000102136.1\|1329431_1331873_-	exonuclease	V5UQJ3	Shigella_phage	3.1e-114	46.9
WP_001070255.1\|1331966_1332158_-	DUF1482 family protein	NA	NA	NA	NA
WP_000854564.1\|1332154_1332343_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001171946.1\|1332911_1333130_-	hypothetical protein	NA	NA	NA	NA
WP_048901463.1\|1333289_1333445_-	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	55.3
WP_000362155.1\|1333710_1334130_-	hypothetical protein	K7PK07	Enterobacteria_phage	8.8e-25	65.1
WP_000391949.1\|1334230_1334512_+	helix-turn-helix domain-containing protein	K7PHA1	Enterobacteria_phage	8.5e-24	72.6
WP_000693837.1\|1334495_1334921_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001262379.1\|1334992_1336057_+	hypothetical protein	A0A088CD36	Shigella_phage	7.9e-62	64.6
WP_001151225.1\|1336097_1336520_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	3.3e-64	91.4
WP_000403785.1\|1336577_1336934_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.8e-58	99.2
WP_001224662.1\|1337027_1337210_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.4e-27	100.0
WP_000753059.1\|1337202_1337379_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	9.7e-26	93.1
WP_000813254.1\|1338300_1338456_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001429486.1\|1338914_1339193_+	hypothetical protein	I6PCV7	Cronobacter_phage	4.3e-12	48.4
WP_001265034.1\|1339194_1340244_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	2.9e-109	54.6
WP_000904092.1\|1340256_1340613_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.8e-34	61.8
WP_000762890.1\|1340627_1341449_+	antitermination protein	K7P7B9	Enterobacteria_phage	6.1e-78	58.6
WP_000526115.1\|1341699_1342158_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_000562553.1\|1343052_1343184_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
WP_000871291.1\|1343464_1343800_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
WP_000874243.1\|1344060_1344249_+	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	7.2e-27	95.2
WP_001327246.1\|1344245_1344407_+	hypothetical protein	Q08JA2	Stx2-converting_phage	2.0e-14	89.1
WP_000372595.1\|1344556_1344772_+\|holin	class II holin family protein	A0A2R2Z340	Escherichia_phage	3.4e-33	98.6
WP_000193296.1\|1344776_1345121_+	YdfR family protein	K7PGU6	Enterobacteria_phage	7.0e-36	92.9
WP_000370546.1\|1345086_1345359_-	hypothetical protein	NA	NA	NA	NA
WP_000992105.1\|1345464_1345998_+	lysozyme	K7PLY1	Enterobacteria_phage	4.8e-100	96.0
WP_001327248.1\|1345994_1346462_+\|lysis	lysis protein	Q9AZ06	Salmonella_phage	5.0e-69	89.7
WP_001139682.1\|1346449_1346602_+	hypothetical protein	Q716B2	Shigella_phage	2.1e-21	100.0
WP_001059340.1\|1346804_1347329_+	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	2.9e-86	93.6
WP_001537735.1\|1347631_1348042_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.7e-55	77.8
WP_000105081.1\|1348099_1348333_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	4.3e-21	94.4
WP_000235436.1\|1348727_1349237_+\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001537733.1\|1349208_1351137_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	9.4e-263	66.5
WP_000258993.1\|1351120_1351327_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_001537684.1\|1351323_1352916_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.9e-185	61.3
WP_001253953.1\|1352905_1354411_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.7e-100	53.5
WP_000256835.1\|1354447_1354795_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.9e-21	55.9
WP_000522583.1\|1354852_1355881_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.6e-114	61.9
WP_000201498.1\|1355932_1356316_+	hypothetical protein	NA	NA	NA	NA
WP_001204571.1\|1356308_1356662_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.1e-41	70.1
WP_000974995.1\|1356677_1357211_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.2e-55	64.1
WP_000683079.1\|1357207_1357603_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000235037.1\|1357610_1358357_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	8.7e-124	93.4
WP_001299690.1\|1358375_1358807_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	67.4
WP_000533402.1\|1358833_1359247_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_000082403.1\|1359227_1361789_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	86.4
WP_000847298.1\|1361785_1362115_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_001327694.1\|1362114_1362813_+\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	7.6e-130	97.0
WP_001576728.1\|1362818_1363562_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	8.3e-143	93.4
WP_072258937.1\|1363507_1364140_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.7e-96	92.3
WP_000514735.1\|1364483_1368176_+	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	85.8
1366441:1366458	attL	NA	NA	NA	NA
WP_001228261.1\|1368243_1368843_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	4.4e-102	92.5
WP_000216560.1\|1368994_1371058_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A1X7QGG5	Escherichia_phage	3.7e-148	62.7
WP_001204582.1\|1371054_1371333_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	1.0e-21	50.5
WP_000355700.1\|1371342_1371636_+	hypothetical protein	NA	NA	NA	NA
WP_071819026.1\|1371675_1371774_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.5e-07	78.1
WP_000742375.1\|1371828_1372485_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937496.1\|1372553_1372820_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.3e-18	78.3
WP_000799413.1\|1373051_1373915_-	spermidine/putrescine ABC transporter permease PotB	NA	NA	NA	NA
WP_000531594.1\|1373898_1375035_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
WP_000359446.1\|1375284_1376511_+	peptidase T	NA	NA	NA	NA
WP_001295435.1\|1376559_1377681_-	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000085269.1\|1377929_1379159_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.1e-131	55.6
WP_000953274.1\|1379524_1379713_+	AlpA family transcriptional regulator	A0A2H4JB58	uncultured_Caudovirales_phage	1.5e-13	66.0
WP_001617541.1\|1379765_1381052_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_000076671.1\|1381048_1381279_+	hypothetical protein	A0A1W6JPD9	Morganella_phage	4.5e-07	49.1
WP_001372127.1\|1381268_1381490_+	hypothetical protein	NA	NA	NA	NA
WP_001204077.1\|1381482_1381704_+	hypothetical protein	NA	NA	NA	NA
WP_001204962.1\|1381705_1381939_+	hypothetical protein	NA	NA	NA	NA
WP_000770152.1\|1381944_1382244_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000761835.1\|1382240_1383995_+	DNA primase	Q7M2A8	Enterobacteria_phage	9.2e-92	40.3
WP_001260558.1\|1384283_1384541_+	hypothetical protein	NA	NA	NA	NA
WP_000126698.1\|1384537_1384948_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_000233305.1\|1384958_1385207_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000796960.1\|1385461_1385668_+	hypothetical protein	NA	NA	NA	NA
WP_000216279.1\|1385667_1386723_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.3e-69	43.6
WP_000380877.1\|1386734_1387070_+\|head	head decoration protein	NA	NA	NA	NA
WP_000224596.1\|1387082_1387496_+	hypothetical protein	NA	NA	NA	NA
WP_000565609.1\|1387658_1388093_+	hypothetical protein	NA	NA	NA	NA
WP_000133413.1\|1388372_1388654_+	hypothetical protein	NA	NA	NA	NA
WP_000734671.1\|1389208_1390669_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001265481.1\|1390668_1391340_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000423742.1\|1391509_1392880_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
WP_001295971.1\|1392883_1393525_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_011076353.1\|1393560_1394667_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|1394720_1395182_-	phosphatase NudJ	NA	NA	NA	NA
WP_000444487.1\|1396017_1397268_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
WP_000741334.1\|1397369_1398512_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z02	Phage_21	1.1e-205	99.7
WP_128890935.1\|1398501_1398600_-	excisionase	NA	NA	NA	NA
WP_139371347.1\|1398655_1399868_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_000088654.1\|1399871_1400051_-	hypothetical protein	NA	NA	NA	NA
WP_000490215.1\|1400190_1400430_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	8.8e-38	93.7
WP_001304460.1\|1400455_1400740_-	ASCH domain-containing protein	A0A2D1GLL3	Escherichia_phage	4.0e-45	89.4
WP_000208010.1\|1400732_1401473_-	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	6.5e-47	67.1
WP_000951713.1\|1401469_1401679_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	1.3e-32	91.2
WP_001327280.1\|1401680_1402214_-	hypothetical protein	Q1MVF7	Enterobacteria_phage	2.5e-64	82.1
WP_001518554.1\|1402231_1402486_-	hypothetical protein	A5LH60	Enterobacteria_phage	1.7e-34	91.1
WP_000065240.1\|1402869_1403625_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.2e-33	33.9
WP_000174402.1\|1403621_1405121_-\|transposase	IS21-like element ISEc10 family transposase	NA	NA	NA	NA
WP_000763378.1\|1405664_1405886_-	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	8.4e-35	97.3
WP_000188870.1\|1405984_1406200_-	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	1.0e-32	100.0
WP_000548537.1\|1406276_1406468_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	2.1e-26	98.4
WP_000149544.1\|1406440_1406623_-	DUF1317 domain-containing protein	A0A1U8QQC1	Enterobacteria_phage	6.9e-27	96.7
WP_000186777.1\|1406619_1407300_-	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	1.6e-129	97.8
WP_000100847.1\|1407296_1408082_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995434.1\|1408087_1408384_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	1.1e-48	98.0
WP_000372923.1\|1408459_1408603_-	host cell division inhibitory peptide Kil	A0A0N7C2U2	Escherichia_phage	2.7e-18	97.9
WP_001198860.1\|1408571_1408736_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A0N6WES3	Escherichia_phage	1.4e-26	100.0
WP_000065374.1\|1408808_1409177_-	DUF2528 family protein	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
WP_000213979.1\|1409359_1409560_-	antirestriction Ral family protein	A0A0K2FJE6	Enterobacteria_phage	7.1e-33	98.5
WP_001066176.1\|1409773_1410355_+	super-infection exclusion protein B	K7P6T7	Enterobacteria_phage	5.2e-92	92.2
WP_000088199.1\|1410371_1410644_-	hypothetical protein	A0A0N7C217	Escherichia_phage	2.8e-40	98.9
WP_000438342.1\|1410621_1410804_-	hypothetical protein	A0A0N7C057	Escherichia_phage	1.1e-27	98.3
WP_000968518.1\|1411080_1411833_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_001062368.1\|1411829_1412387_-	hypothetical protein	NA	NA	NA	NA
WP_000067727.1\|1413204_1413420_+	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
WP_000442609.1\|1413561_1413858_+	hypothetical protein	G9L678	Escherichia_phage	2.2e-46	94.9
WP_000185431.1\|1413890_1414790_+	replication protein	K7P7F0	Enterobacteria_phage	3.5e-172	99.0
WP_000788872.1\|1414786_1415488_+	Replication protein 14	A0A0P0ZD31	Stx2-converting_phage	2.9e-129	99.6
WP_000145927.1\|1415484_1415775_+	protein ren	O48423	Enterobacteria_phage	2.8e-46	97.9
WP_139371347.1\|1415866_1417079_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.9e-169	99.7
WP_000736913.1\|1417161_1417602_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
WP_000153286.1\|1417598_1418126_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	4.7e-100	99.4
WP_001254243.1\|1418122_1418299_+	NinE family protein	A5VW90	Enterobacteria_phage	3.3e-26	96.6
WP_000386643.1\|1418301_1418643_+	DUF2591 family protein	Q76H72	Enterobacteria_phage	1.6e-61	96.5
WP_001099712.1\|1418849_1419212_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	4.3e-60	96.5
WP_000971053.1\|1419208_1419349_+	YlcG family protein	K7PHH3	Enterobacteria_phage	3.6e-07	67.4
WP_001204776.1\|1419434_1419818_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	1.5e-55	83.3
WP_000737271.1\|1420006_1421089_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.6e-166	80.1
WP_000839596.1\|1421677_1421893_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135277.1\|1421892_1422390_+	lysozyme RrrD	M1FJA0	Enterobacteria_phage	5.4e-90	97.0
WP_001228695.1\|1422606_1422789_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001298464.1\|1422879_1423173_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	7.0e-45	92.8
WP_000830178.1\|1423653_1423980_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_000881610.1\|1424186_1424369_+	hypothetical protein	NA	NA	NA	NA
WP_000867568.1\|1424931_1425480_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
WP_001335577.1\|1425451_1427380_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	2.5e-260	66.7
WP_000258997.1\|1427363_1427570_+\|head	phage head-stabilizing protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_000831760.1\|1427566_1429159_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	6.5e-185	61.1
WP_001253913.1\|1429148_1430654_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.6e-100	53.7
WP_000256791.1\|1430690_1431038_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.6e-22	58.1
WP_000522648.1\|1431095_1432124_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	5.9e-115	61.6
WP_000201530.1\|1432175_1432550_+	hypothetical protein	NA	NA	NA	NA
WP_001204540.1\|1432542_1432896_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	3.4e-38	65.0
WP_000975062.1\|1432907_1433486_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.9e-79	99.0
WP_000683101.1\|1433482_1433878_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	5.5e-69	97.7
WP_000479129.1\|1434637_1435060_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.7e-66	91.4
WP_000459474.1\|1435041_1435476_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	9.0e-57	90.0
WP_000840269.1\|1435468_1438030_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	94.5
WP_000847405.1\|1438026_1438356_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	5.4e-54	94.5
WP_001152660.1\|1438355_1439054_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.0e-131	97.8
WP_000140699.1\|1439059_1439803_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.1e-147	97.2
WP_000090917.1\|1439739_1440372_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-97	100.0
WP_000515327.1\|1440432_1443915_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.5
WP_000654167.1\|1446030_1446309_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	7.6e-25	56.5
1449056:1449073	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2499669 : 2509114

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001305166.1\|2499669_2500806_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	3.8e-163	97.7
WP_001327380.1\|2500802_2502806_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.1
WP_001296231.1\|2502930_2503392_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
WP_024182243.1\|2503432_2503903_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	8.8e-82	99.4
WP_000598641.1\|2503949_2504669_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2504665_2506351_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240404.1\|2506572_2507304_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.2e-111	99.0
WP_001216963.1\|2507363_2507471_+	protein YohO	NA	NA	NA	NA
WP_000783150.1\|2507451_2508183_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569381.1\|2508187_2509114_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8

DBSCAN-SWA_5

2974893 : 3065315

102

Enterobacteria_phage(38.6%)

head,transposase,capsid,terminase,holin,portal,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000083664.1\|2974893_2975631_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219193.1\|2975762_2977097_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.9e-45	30.8
WP_001298616.1\|2977129_2978011_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000189209.1\|2978113_2978701_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627804.1\|2978756_2979140_-	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	4.7e-33	70.9
WP_001262725.1\|2979444_2980134_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	2.7e-55	48.4
WP_000997423.1\|2980182_2981220_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098726.1\|2981426_2981846_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
WP_001298618.1\|2981914_2982613_+\|tRNA	tRNA-uridine aminocarboxypropyltransferase	NA	NA	NA	NA
WP_000083021.1\|2982644_2985305_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_001305244.1\|2985418_2986774_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_001370843.1\|2986819_2987143_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_001443088.1\|2987139_2988438_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	2.8e-45	31.7
WP_001235102.1\|2994300_2996874_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
WP_000040136.1\|2997003_2997735_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079112.1\|2997731_2998712_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197686.1\|2998846_2999584_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178456.1\|2999853_3000195_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_001386991.1\|3000298_3000346_+	pheA operon leader peptide PheL	NA	NA	NA	NA
WP_000200106.1\|3000444_3001605_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000225230.1\|3001647_3002769_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168045.1\|3002779_3003850_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.0e-90	51.2
WP_001298694.1\|3004059_3004425_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_001212400.1\|3004571_3005090_+	YfiR family protein	NA	NA	NA	NA
WP_000969016.1\|3005079_3006306_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_000589793.1\|3006321_3006804_+	OmpA family protein	NA	NA	NA	NA
WP_000065253.1\|3006880_3007228_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000264777.1\|3007269_3008037_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043335.1\|3008067_3008616_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256450.1\|3008634_3008883_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460035.1\|3009019_3010381_-	signal recognition particle protein	NA	NA	NA	NA
WP_001338897.1\|3010547_3011339_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_032140825.1\|3011359_3012646_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001296310.1\|3012700_3013294_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059176.1\|3013416_3014295_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880938.1\|3014380_3016042_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203437.1\|3016190_3016532_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001117834.1\|3016593_3016884_-	RnfH family protein	NA	NA	NA	NA
WP_000600193.1\|3016873_3017350_-	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_000162574.1\|3017481_3017964_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
WP_001072749.1\|3018709_3019630_+	hypothetical protein	NA	NA	NA	NA
WP_001372053.1\|3020595_3020709_+	hypothetical protein	A0A1C9IHU6	Salmonella_phage	1.4e-06	77.8
WP_000836769.1\|3020777_3021011_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	6.4e-33	88.3
WP_000086527.1\|3021385_3021976_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_001306187.1\|3022203_3022497_-	hypothetical protein	NA	NA	NA	NA
WP_001306186.1\|3022539_3023580_-\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	6.4e-125	67.6
WP_000654158.1\|3023589_3023871_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.6e-17	48.9
WP_000741758.1\|3023867_3026267_-\|tail	prophage tail fiber N-terminal domain-containing protein	A0A0E3M194	Enterobacteria_phage	3.9e-133	55.2
WP_000526135.1\|3026387_3026846_-\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_001228249.1\|3027042_3027642_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	1.5e-102	92.0
WP_000515334.1\|3027709_3031189_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.6
WP_000090890.1\|3031249_3031882_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	2.2e-96	99.0
WP_000140691.1\|3031818_3032562_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	9.8e-144	93.5
WP_001152645.1\|3032566_3033265_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	3.6e-132	98.3
WP_000847327.1\|3033264_3033594_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	9.6e-59	99.1
WP_000840307.1\|3033590_3036152_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	90.6
WP_000459451.1\|3036144_3036579_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.0e-63	98.3
WP_000479167.1\|3036560_3036983_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	4.5e-69	94.3
WP_001547293.1\|3036998_3037739_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	1.2e-128	97.2
WP_000683090.1\|3037746_3038142_-\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	2.5e-69	96.9
WP_000985118.1\|3038138_3038717_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.7e-79	99.0
WP_000752955.1\|3038728_3039082_-\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	2.9e-61	98.3
WP_000158882.1\|3039093_3039489_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	3.1e-56	92.4
WP_000063221.1\|3039530_3040556_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.1e-189	97.9
WP_001338090.1\|3040610_3040943_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.5e-55	99.1
WP_000123331.1\|3040952_3042272_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	5.6e-235	99.1
WP_001534239.1\|3042252_3043854_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	98.9
WP_000198149.1\|3043850_3044057_-	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001027232.1\|3044053_3045979_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	98.9
WP_000453567.1\|3045953_3046499_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	7.8e-90	93.4
WP_001300120.1\|3046887_3047082_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	1.5e-27	98.4
WP_000548592.1\|3047332_3047539_-	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	3.4e-22	79.4
WP_001019207.1\|3047834_3048008_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_001443523.1\|3048180_3048336_-	hypothetical protein	NA	NA	NA	NA
WP_071526745.1\|3048483_3048672_-	cold-shock protein	NA	NA	NA	NA
WP_000066495.1\|3048682_3048895_-	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_001071776.1\|3049259_3049757_-	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_001101173.1\|3049753_3050287_-	lysozyme	K7PLY1	Enterobacteria_phage	1.4e-96	93.8
WP_001306174.1\|3050400_3050661_+	hypothetical protein	NA	NA	NA	NA
WP_000189904.1\|3050608_3051160_-	YdfR family protein	Q08JA0	Stx2-converting_phage	4.2e-35	50.6
WP_000839581.1\|3051164_3051380_-\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	7.9e-30	90.1
WP_000066482.1\|3052132_3052348_-	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	2.6e-25	76.5
WP_000087756.1\|3052648_3052861_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_122985741.1\|3052915_3053005_+	hypothetical protein	NA	NA	NA	NA
WP_001047084.1\|3053276_3054029_-	antitermination protein	K7PGU5	Enterobacteria_phage	1.1e-131	96.4
WP_016230662.1\|3054042_3055032_-	DUF968 domain-containing protein	S5FV02	Shigella_phage	4.3e-195	99.7
WP_001061410.1\|3055039_3055837_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	4.9e-149	98.9
WP_000767122.1\|3055856_3056246_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	1.0e-67	98.4
WP_000210150.1\|3056242_3056569_-	LexA repressor	A0A0N7KZF7	Stx2-converting_phage	1.3e-52	98.1
WP_001573323.1\|3056568_3057063_-	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	6.2e-86	97.5
WP_000104957.1\|3057059_3058001_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.7e-140	93.3
WP_001250269.1\|3057990_3058170_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000515870.1\|3058345_3058897_-	hypothetical protein	U5P4K1	Shigella_phage	1.7e-100	98.9
WP_000205494.1\|3058934_3059135_-	cell division protein	NA	NA	NA	NA
WP_000450738.1\|3059232_3059859_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	2.5e-47	48.8
WP_000500991.1\|3060074_3060587_-	hypothetical protein	NA	NA	NA	NA
WP_000135691.1\|3061054_3061417_+	hypothetical protein	Q8SBF8	Shigella_phage	1.2e-59	98.3
WP_000081287.1\|3061482_3062307_+	DUF2303 family protein	U5P439	Shigella_phage	6.0e-150	100.0
WP_000008221.1\|3062434_3062959_+	5'-deoxynucleotidase	S5MW55	Escherichia_phage	2.0e-95	97.7
WP_001075212.1\|3063067_3063934_+	hypothetical protein	NA	NA	NA	NA
WP_001331174.1\|3063975_3064182_+	hypothetical protein	I6PBM8	Cronobacter_phage	6.9e-23	70.3
WP_000531795.1\|3064142_3065315_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	7.4e-146	67.0

DBSCAN-SWA_6

3138249 : 3145389

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000103863.1\|3138249_3140811_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
WP_001141289.1\|3140916_3141573_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	2.8e-49	45.2
WP_001298167.1\|3141623_3142391_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.2e-69	57.4
WP_000847998.1\|3142586_3143495_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.1e-118	76.9
WP_000590418.1\|3143491_3144754_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
WP_001279001.1\|3144750_3145389_+	aldolase	A0A077SK32	Escherichia_phage	2.8e-83	75.0

DBSCAN-SWA_7

3376982 : 3440670

Stx2-converting_phage(45.45%)

transposase,protease,integrase,tRNA,lysis

attL 3396920:3396935|attR 3426945:3426960

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001327406.1\|3376982_3377741_+\|protease	metalloprotease LoiP	NA	NA	NA	NA
WP_000105562.1\|3377944_3378865_-	agmatinase	NA	NA	NA	NA
WP_000758911.1\|3379000_3379732_-	hypothetical protein	NA	NA	NA	NA
WP_001295380.1\|3379877_3381854_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
WP_001297406.1\|3381862_3381994_-	acid stress response protein YqgB	NA	NA	NA	NA
WP_048901457.1\|3382129_3382345_+	hypothetical protein	NA	NA	NA	NA
WP_001062128.1\|3382648_3383803_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
WP_001112301.1\|3384238_3385633_+	galactose/proton symporter	NA	NA	NA	NA
WP_000858396.1\|3385709_3386207_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_001327408.1\|3386301_3387009_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222509.1\|3387088_3387820_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593261.1\|3387832_3388783_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|3388891_3389455_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017106.1\|3389454_3389871_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001327409.1\|3390044_3391025_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|3391042_3391747_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|3391764_3392331_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|3392327_3392618_+	YggU family protein	NA	NA	NA	NA
WP_001174738.1\|3392625_3393219_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239981.1\|3393211_3394348_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000745192.1\|3394416_3395424_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394106.1\|3395540_3396587_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|3396762_3397482_-	DUF2884 domain-containing protein	NA	NA	NA	NA
3396920:3396935	attL	NA	NA	NA	NA
WP_001107565.1\|3397665_3397992_-	YggL family protein	NA	NA	NA	NA
WP_000786915.1\|3397991_3398711_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001327411.1\|3398871_3399924_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091699.1\|3399951_3400227_+	oxidative damage protection protein	NA	NA	NA	NA
WP_000760323.1\|3400291_3401371_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001327414.1\|3401572_3402829_+	nucleoside permease NupG	NA	NA	NA	NA
WP_000839794.1\|3402877_3405013_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234491.1\|3405411_3406119_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218870.1\|3406497_3407763_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	6.1e-77	38.1
WP_000147023.1\|3408018_3409062_+	hypothetical protein	NA	NA	NA	NA
WP_000839179.1\|3410472_3410877_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
WP_000612626.1\|3410873_3411221_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000995840.1\|3413217_3414690_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.9e-21	27.9
WP_001066996.1\|3414690_3415410_-	response regulator transcription factor	W8CYM9	Bacillus_phage	4.2e-35	35.2
WP_000726551.1\|3416148_3416892_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_000789528.1\|3416946_3417189_+	hypothetical protein	NA	NA	NA	NA
WP_001546261.1\|3418371_3418884_+	alpha-hemolysin-activating lysine-acyltransferase HlyC	NA	NA	NA	NA
WP_001142375.1\|3418895_3421970_+	RTX toxin hemolysin HlyA	NA	NA	NA	NA
WP_000376545.1\|3422040_3424164_+	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	1.4e-46	29.7
WP_000860472.1\|3424182_3425619_+	alpha-hemolysin T1SS ABC transporter subunit HlyD	NA	NA	NA	NA
WP_085962335.1\|3425930_3427087_-\|transposase	IS3-like element IS600 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.8e-68	45.1
3426945:3426960	attR	NA	NA	NA	NA
WP_001171554.1\|3427189_3427570_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
WP_000612591.1\|3427566_3427914_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_071529140.1\|3428321_3428429_+\|transposase	transposase domain-containing protein	A0A0P0ZEB3	Stx2-converting_phage	1.1e-13	97.1
WP_001298062.1\|3428778_3429330_-	HTH-type transcriptional regulator PapX	NA	NA	NA	NA
WP_000758683.1\|3429592_3430603_-	P fimbria tip G-adhesin PapG-II	NA	NA	NA	NA
WP_000113351.1\|3430646_3431147_-	P fimbrial tip protein PapF	NA	NA	NA	NA
WP_000723799.1\|3431221_3431743_-	P fimbrial minor subunit PapE	NA	NA	NA	NA
WP_000597713.1\|3431769_3432306_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_000261297.1\|3432315_3432897_-	protein papJ	NA	NA	NA	NA
WP_000265729.1\|3432933_3433668_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000654937.1\|3433738_3436249_-	P fimbrial usher protein PapC	NA	NA	NA	NA
WP_001239363.1\|3436307_3436895_-	P fimbrial minor subunit PapH	NA	NA	NA	NA
WP_000597756.1\|3436964_3437531_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_000930062.1\|3437737_3438052_-	major pilus subunit operon regulatory protein PapB	NA	NA	NA	NA
WP_000006206.1\|3438456_3438690_+	major pilus subunit operon transcriptional regulator PapI	NA	NA	NA	NA
WP_001513409.1\|3440556_3440670_-\|lysis	lysis protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_004431

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection