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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_004565 Clostridium tetani E88 plasmid pE88, complete sequence 0 crisprs Cas14u_CAS-V 0 0 0 0
NC_004557 Clostridium tetani E88, complete sequence 8 crisprs csa3,cas3HD,WYL,DEDDh,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,cas7b,cas8b1,cas14j,RT 9 37 7 1

Results visualization

1. NC_004557
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004557_1 1217308-1219530 Unclear NA
33 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004557_2 1570766-1571383 TypeI-B III-B
9 spacers
cas2,cas1,cas4

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004557_3 1573235-1573655 TypeI-B III-B
6 spacers
cas2,cas1,cas4,cas3,cas5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004557_4 1577804-1577966 TypeI-B III-B
2 spacers
cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004557_5 1580088-1580377 TypeI-B III-B
4 spacers
cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004557_6 1589679-1590034 TypeI-B III-B
5 spacers
cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004557_7 1592009-1592427 TypeI-B III-B
6 spacers
cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004557_8 1595950-1596044 TypeI-B III-B
1 spacers
cas6,cas8b1,cas7b,cas5,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_004557_1 1.1|1217338|36|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1217338-1217373 36 NC_004557.1 1205308-1205343 0 1.0
NC_004557_1 1.2|1217404|36|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1217404-1217439 36 NC_004557.1 1191961-1191996 0 1.0
NC_004557_1 1.8|1217803|39|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1217803-1217841 39 NC_004557.1 1099343-1099381 0 1.0
NC_004557_1 1.9|1217872|36|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1217872-1217907 36 NC_004557.1 1399450-1399485 0 1.0
NC_004557_2 2.9|1571318|36|NC_004557|CRISPRCasFinder,CRT 1571318-1571353 36 NC_004557.1 345159-345194 0 1.0
NC_004557_2 2.18|1571320|36|NC_004557|PILER-CR 1571320-1571355 36 NC_004557.1 345159-345194 0 1.0
NC_004557_3 3.1|1573265|34|NC_004557|CRISPRCasFinder,CRT 1573265-1573298 34 NC_004557.1 2280755-2280788 0 1.0
NC_004557_7 7.6|1592362|36|NC_004557|CRISPRCasFinder,CRT 1592362-1592397 36 NC_004557.1 462335-462370 0 1.0
NC_004557_7 7.12|1592363|36|NC_004557|PILER-CR 1592363-1592398 36 NC_004557.1 462335-462370 0 1.0

1. spacer 1.1|1217338|36|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to position: 1205308-1205343, mismatch: 0, identity: 1.0

ttaaatgaaggtactaaatttaaggtaagaatggtg	CRISPR spacer
ttaaatgaaggtactaaatttaaggtaagaatggtg	Protospacer
************************************

2. spacer 1.2|1217404|36|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to position: 1191961-1191996, mismatch: 0, identity: 1.0

agcattcctctatctccattaactactgaaaaagga	CRISPR spacer
agcattcctctatctccattaactactgaaaaagga	Protospacer
************************************

3. spacer 1.8|1217803|39|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to position: 1099343-1099381, mismatch: 0, identity: 1.0

atacaatgctccatggaaaggactccacttagatatata	CRISPR spacer
atacaatgctccatggaaaggactccacttagatatata	Protospacer
***************************************

4. spacer 1.9|1217872|36|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to position: 1399450-1399485, mismatch: 0, identity: 1.0

cccacatcattaaaggatataaaattaccaccttcc	CRISPR spacer
cccacatcattaaaggatataaaattaccaccttcc	Protospacer
************************************

5. spacer 2.9|1571318|36|NC_004557|CRISPRCasFinder,CRT matches to position: 345159-345194, mismatch: 0, identity: 1.0

acagtaacatgaatacactcatgttactgtttttca	CRISPR spacer
acagtaacatgaatacactcatgttactgtttttca	Protospacer
************************************

6. spacer 2.18|1571320|36|NC_004557|PILER-CR matches to position: 345159-345194, mismatch: 0, identity: 1.0

acagtaacatgaatacactcatgttactgtttttca	CRISPR spacer
acagtaacatgaatacactcatgttactgtttttca	Protospacer
************************************

7. spacer 3.1|1573265|34|NC_004557|CRISPRCasFinder,CRT matches to position: 2280755-2280788, mismatch: 0, identity: 1.0

ttaatccagataaaatatattctcttacagcaat	CRISPR spacer
ttaatccagataaaatatattctcttacagcaat	Protospacer
**********************************

8. spacer 7.6|1592362|36|NC_004557|CRISPRCasFinder,CRT matches to position: 462335-462370, mismatch: 0, identity: 1.0

gcatcaaacatagttacagcaattgtagttacaaag	CRISPR spacer
gcatcaaacatagttacagcaattgtagttacaaag	Protospacer
************************************

9. spacer 7.12|1592363|36|NC_004557|PILER-CR matches to position: 462335-462370, mismatch: 0, identity: 1.0

gcatcaaacatagttacagcaattgtagttacaaag	CRISPR spacer
gcatcaaacatagttacagcaattgtagttacaaag	Protospacer
************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_004557_1 1.6|1217671|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1217671-1217705 35 KM983328 Clostridium phage phiCT453B, complete genome 7040-7074 0 1.0
NC_004557_3 3.1|1573265|34|NC_004557|CRISPRCasFinder,CRT 1573265-1573298 34 KM983328 Clostridium phage phiCT453B, complete genome 594-627 0 1.0
NC_004557_3 3.1|1573265|34|NC_004557|CRISPRCasFinder,CRT 1573265-1573298 34 KM983334 Clostridium phage phiCTC2B, complete genome 594-627 0 1.0
NC_004557_3 3.1|1573265|34|NC_004557|CRISPRCasFinder,CRT 1573265-1573298 34 KM983331 Clostridium phage phiCT19406B, complete genome 594-627 0 1.0
NC_004557_3 3.3|1573393|35|NC_004557|CRISPRCasFinder,CRT,PILER-CR 1573393-1573427 35 KM983328 Clostridium phage phiCT453B, complete genome 24672-24706 0 1.0
NC_004557_3 3.5|1573525|35|NC_004557|CRISPRCasFinder,CRT,PILER-CR 1573525-1573559 35 KM983327 Clostridium phage phiCT453A, complete genome 21916-21950 0 1.0
NC_004557_7 7.2|1592104|34|NC_004557|CRISPRCasFinder,CRT 1592104-1592137 34 KM983328 Clostridium phage phiCT453B, complete genome 14660-14693 0 1.0
NC_004557_7 7.8|1592105|34|NC_004557|PILER-CR 1592105-1592138 34 KM983328 Clostridium phage phiCT453B, complete genome 14660-14693 0 1.0
NC_004557_3 3.6|1573590|36|NC_004557|CRISPRCasFinder,CRT,PILER-CR 1573590-1573625 36 KM983327 Clostridium phage phiCT453A, complete genome 5886-5921 1 0.972
NC_004557_4 4.2|1577900|36|NC_004557|PILER-CR 1577900-1577935 36 KM983327 Clostridium phage phiCT453A, complete genome 9576-9611 1 0.972
NC_004557_4 4.4|1577899|38|NC_004557|CRISPRCasFinder 1577899-1577936 38 KM983327 Clostridium phage phiCT453A, complete genome 9576-9613 1 0.974
NC_004557_1 1.6|1217671|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1217671-1217705 35 KM983329 Clostridium phage phiCT9441A, complete genome 8919-8953 2 0.943
NC_004557_2 2.8|1571254|34|NC_004557|CRISPRCasFinder,CRT 1571254-1571287 34 KM983327 Clostridium phage phiCT453A, complete genome 19576-19609 2 0.941
NC_004557_2 2.17|1571256|34|NC_004557|PILER-CR 1571256-1571289 34 KM983327 Clostridium phage phiCT453A, complete genome 19576-19609 2 0.941
NC_004557_1 1.14|1218204|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1218204-1218238 35 NZ_CP013848 Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence 10611-10645 3 0.914
NC_004557_2 2.4|1570993|34|NC_004557|CRISPRCasFinder,CRT 1570993-1571026 34 NC_010418 Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence 196160-196193 3 0.912
NC_004557_2 2.13|1570995|34|NC_004557|PILER-CR 1570995-1571028 34 NC_010418 Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence 196160-196193 3 0.912
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 CP002037 Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence 56952-56983 5 0.844
NC_004557_2 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT 1571188-1571223 36 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 313612-313647 6 0.833
NC_004557_2 2.16|1571190|36|NC_004557|PILER-CR 1571190-1571225 36 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 313612-313647 6 0.833
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 353608-353639 6 0.812
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NZ_CP015592 Bacillus cereus strain AR156 plasmid pAR460, complete sequence 412221-412252 6 0.812
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NZ_CP009368 Bacillus cereus strain FM1 plasmid unnamed, complete sequence 364324-364355 6 0.812
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MT774380 CrAssphage cr1_1, complete genome 3245-3276 6 0.812
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 353606-353639 6 0.824
NC_004557_2 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT 1571188-1571223 36 MN693162 Marine virus AFVG_25M233, complete genome 7269-7304 7 0.806
NC_004557_2 2.16|1571190|36|NC_004557|PILER-CR 1571190-1571225 36 MN693162 Marine virus AFVG_25M233, complete genome 7269-7304 7 0.806
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NZ_CP033050 Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence 309797-309828 7 0.781
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NZ_CP043831 Bacillus sp. BS98 plasmid unnamed1 186464-186495 7 0.781
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 840082-840113 7 0.781
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NZ_AP017969 Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence 69076-69107 7 0.781
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NC_007021 Staphylococcus phage Twort, complete genome 113971-114002 7 0.781
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MT151386 Staphylococcus virus Twort, complete genome 25794-25825 7 0.781
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 CP002037 Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence 56952-56985 7 0.794
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 NZ_CP015592 Bacillus cereus strain AR156 plasmid pAR460, complete sequence 412221-412254 7 0.794
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 NZ_CP009368 Bacillus cereus strain FM1 plasmid unnamed, complete sequence 364324-364357 7 0.794
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 MT774380 CrAssphage cr1_1, complete genome 3243-3276 7 0.794
NC_004557_7 7.2|1592104|34|NC_004557|CRISPRCasFinder,CRT 1592104-1592137 34 NZ_CP024873 Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence 73565-73598 7 0.794
NC_004557_7 7.8|1592105|34|NC_004557|PILER-CR 1592105-1592138 34 NZ_CP024873 Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence 73565-73598 7 0.794
NC_004557_1 1.25|1218935|37|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1218935-1218971 37 NZ_CP014152 Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence 146195-146231 8 0.784
NC_004557_1 1.25|1218935|37|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1218935-1218971 37 NZ_CP013710 Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence 133154-133190 8 0.784
NC_004557_2 2.3|1570929|34|NC_004557|CRISPRCasFinder,CRT 1570929-1570962 34 NC_028838 Clostridium phage phiCD506, complete genome 19424-19457 8 0.765
NC_004557_2 2.6|1571123|35|NC_004557|CRISPRCasFinder,CRT 1571123-1571157 35 NZ_CP039845 Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence 44968-45002 8 0.771
NC_004557_2 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT 1571188-1571223 36 MN693344 Marine virus AFVG_25M232, complete genome 2321-2356 8 0.778
NC_004557_2 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT 1571188-1571223 36 AP013454 Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S33-C36 19997-20032 8 0.778
NC_004557_2 2.12|1570931|34|NC_004557|PILER-CR 1570931-1570964 34 NC_028838 Clostridium phage phiCD506, complete genome 19424-19457 8 0.765
NC_004557_2 2.15|1571125|35|NC_004557|PILER-CR 1571125-1571159 35 NZ_CP039845 Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence 44968-45002 8 0.771
NC_004557_2 2.16|1571190|36|NC_004557|PILER-CR 1571190-1571225 36 MN693344 Marine virus AFVG_25M232, complete genome 2321-2356 8 0.778
NC_004557_2 2.16|1571190|36|NC_004557|PILER-CR 1571190-1571225 36 AP013454 Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S33-C36 19997-20032 8 0.778
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MF186604 Methanosarcina spherical virus, complete genome 971-1002 8 0.75
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 AP014322 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C37, *** SEQUENCING IN PROGRESS *** 11492-11523 8 0.75
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 NC_019749 Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.02, complete sequence 38582-38613 8 0.75
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MK614706 Gammaproteobacteria virus GOV_bin_2604, complete genome 55000-55031 8 0.75
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MT325768 Psychrobacillus phage Perkons, complete genome 7524-7555 8 0.75
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 NZ_CP043831 Bacillus sp. BS98 plasmid unnamed1 186464-186497 8 0.765
NC_004557_5 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT 1580118-1580153 36 MN693129 Marine virus AFVG_25M62, complete genome 46972-47007 8 0.778
NC_004557_5 5.5|1580119|36|NC_004557|PILER-CR 1580119-1580154 36 MN693129 Marine virus AFVG_25M62, complete genome 46972-47007 8 0.778
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NZ_CP017256 Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence 158090-158123 8 0.765
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NC_011732 Gloeothece citriformis PCC 7424 plasmid pP742404, complete sequence 17051-17084 8 0.765
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NZ_CP017256 Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence 158090-158123 8 0.765
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NC_011732 Gloeothece citriformis PCC 7424 plasmid pP742404, complete sequence 17051-17084 8 0.765
NC_004557_7 7.1|1592039|35|NC_004557|CRISPRCasFinder,CRT 1592039-1592073 35 NZ_CP026601 Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence 34147-34181 8 0.771
NC_004557_7 7.7|1592040|35|NC_004557|PILER-CR 1592040-1592074 35 NZ_CP026601 Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence 34147-34181 8 0.771
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MH617682 Microviridae sp. isolate ctcb14, complete genome 11-42 9 0.719
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 NZ_CP033050 Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence 309795-309828 9 0.735
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 NZ_LR214986 Mycoplasma cynos strain NCTC10142 plasmid 13 840082-840115 9 0.735
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 AP014322 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C37, *** SEQUENCING IN PROGRESS *** 11490-11523 9 0.735
NC_004557_5 5.3|1580250|34|NC_004557|CRISPRCasFinder,CRT 1580250-1580283 34 NZ_CP015331 Borrelia hermsii HS1 isolate Browne Mountain plasmid lpN31, complete sequence 6668-6701 9 0.735
NC_004557_5 5.3|1580250|34|NC_004557|CRISPRCasFinder,CRT 1580250-1580283 34 NZ_CP039041 Piscirickettsia salmonis strain Psal-072 plasmid unnamed1, complete sequence 53993-54026 9 0.735
NC_004557_5 5.3|1580250|34|NC_004557|CRISPRCasFinder,CRT 1580250-1580283 34 NZ_CP039048 Piscirickettsia salmonis strain Psal-073 plasmid unnamed2, complete sequence 95035-95068 9 0.735
NC_004557_5 5.7|1580251|34|NC_004557|PILER-CR 1580251-1580284 34 NZ_CP015331 Borrelia hermsii HS1 isolate Browne Mountain plasmid lpN31, complete sequence 6668-6701 9 0.735
NC_004557_5 5.7|1580251|34|NC_004557|PILER-CR 1580251-1580284 34 NZ_CP039041 Piscirickettsia salmonis strain Psal-072 plasmid unnamed1, complete sequence 53993-54026 9 0.735
NC_004557_5 5.7|1580251|34|NC_004557|PILER-CR 1580251-1580284 34 NZ_CP039048 Piscirickettsia salmonis strain Psal-073 plasmid unnamed2, complete sequence 95035-95068 9 0.735
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NZ_KT897276 Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence 127266-127299 9 0.735
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NZ_KT897280 Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence 136997-137030 9 0.735
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NZ_KT897275 Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence 132152-132185 9 0.735
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NZ_KT897277 Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence 127266-127299 9 0.735
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NZ_KT897278 Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence 134422-134455 9 0.735
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NZ_KT897279 Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence 135558-135591 9 0.735
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NZ_KT897276 Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence 127266-127299 9 0.735
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NZ_KT897280 Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence 136997-137030 9 0.735
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NZ_KT897275 Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence 132152-132185 9 0.735
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NZ_KT897277 Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence 127266-127299 9 0.735
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NZ_KT897278 Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence 134422-134455 9 0.735
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NZ_KT897279 Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence 135558-135591 9 0.735
NC_004557_1 1.33|1219466|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1219466-1219500 35 MT457553 Shewanella phage Thanatos-2, complete genome 40254-40288 10 0.714
NC_004557_1 1.33|1219466|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1219466-1219500 35 MT457552 Shewanella phage Thanatos-1, complete genome 36870-36904 10 0.714
NC_004557_2 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT 1571188-1571223 36 MN693242 Marine virus AFVG_25M170, complete genome 29744-29779 10 0.722
NC_004557_2 2.16|1571190|36|NC_004557|PILER-CR 1571190-1571225 36 MN693242 Marine virus AFVG_25M170, complete genome 29744-29779 10 0.722
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MF001361 Enterococcus phage EF5, partial genome 94857-94888 10 0.688
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MN693045 Marine virus AFVG_25M135, complete genome 24068-24099 10 0.688
NC_004557_4 4.1|1577836|32|NC_004557|PILER-CR 1577836-1577867 32 MF001358 Enterococcus phage EF1, partial genome 22458-22489 10 0.688
NC_004557_4 4.3|1577835|34|NC_004557|CRISPRCasFinder 1577835-1577868 34 MF186604 Methanosarcina spherical virus, complete genome 969-1002 10 0.706
NC_004557_5 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT 1580118-1580153 36 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 449487-449522 10 0.722
NC_004557_5 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT 1580118-1580153 36 NZ_CP053657 Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence 85812-85847 10 0.722
NC_004557_5 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT 1580118-1580153 36 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 338896-338931 10 0.722
NC_004557_5 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT 1580118-1580153 36 CP024685 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence 33508-33543 10 0.722
NC_004557_5 5.4|1580314|34|NC_004557|CRISPRCasFinder,CRT 1580314-1580347 34 NZ_AP018284 Chondrocystis sp. NIES-4102 plasmid plasmid3 DNA, complete genome 83426-83459 10 0.706
NC_004557_5 5.5|1580119|36|NC_004557|PILER-CR 1580119-1580154 36 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 449487-449522 10 0.722
NC_004557_5 5.5|1580119|36|NC_004557|PILER-CR 1580119-1580154 36 NZ_CP053657 Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence 85812-85847 10 0.722
NC_004557_5 5.5|1580119|36|NC_004557|PILER-CR 1580119-1580154 36 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 338896-338931 10 0.722
NC_004557_5 5.5|1580119|36|NC_004557|PILER-CR 1580119-1580154 36 CP024685 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence 33508-33543 10 0.722
NC_004557_5 5.8|1580315|34|NC_004557|PILER-CR 1580315-1580348 34 NZ_AP018284 Chondrocystis sp. NIES-4102 plasmid plasmid3 DNA, complete genome 83426-83459 10 0.706
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 NZ_CP022140 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence 55234-55267 10 0.706
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 MH617769 Siphoviridae sp. isolate ctjc_2, complete genome 42776-42809 10 0.706
NC_004557_6 6.4|1589907|34|NC_004557|CRISPRCasFinder 1589907-1589940 34 LR588166 Pseudomonas phage vB_PaeM_MIJ3 50432-50465 10 0.706
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 NZ_CP022140 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence 55234-55267 10 0.706
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 MH617769 Siphoviridae sp. isolate ctjc_2, complete genome 42776-42809 10 0.706
NC_004557_6 6.5|1589971|34|NC_004557|CRISPRCasFinder 1589971-1590004 34 LR588166 Pseudomonas phage vB_PaeM_MIJ3 50432-50465 10 0.706
NC_004557_8 8.1|1595980|35|NC_004557|CRISPRCasFinder 1595980-1596014 35 MN694169 Marine virus AFVG_250M458, complete genome 620-654 10 0.714
NC_004557_1 1.19|1218532|36|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1218532-1218567 36 NZ_CP010123 Escherichia coli strain C5 plasmid A, complete genome 146371-146406 11 0.694
NC_004557_1 1.28|1219135|38|NC_004557|PILER-CR,CRISPRCasFinder,CRT 1219135-1219172 38 NC_011737 Gloeothece citriformis PCC 7424 plasmid pP742402, complete sequence 86193-86230 11 0.711

1. spacer 1.6|1217671|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to KM983328 (Clostridium phage phiCT453B, complete genome) position: , mismatch: 0, identity: 1.0

ttgttcgtaactgttaaagctatctttctttatgc	CRISPR spacer
ttgttcgtaactgttaaagctatctttctttatgc	Protospacer
***********************************

2. spacer 3.1|1573265|34|NC_004557|CRISPRCasFinder,CRT matches to KM983328 (Clostridium phage phiCT453B, complete genome) position: , mismatch: 0, identity: 1.0

ttaatccagataaaatatattctcttacagcaat	CRISPR spacer
ttaatccagataaaatatattctcttacagcaat	Protospacer
**********************************

3. spacer 3.1|1573265|34|NC_004557|CRISPRCasFinder,CRT matches to KM983334 (Clostridium phage phiCTC2B, complete genome) position: , mismatch: 0, identity: 1.0

ttaatccagataaaatatattctcttacagcaat	CRISPR spacer
ttaatccagataaaatatattctcttacagcaat	Protospacer
**********************************

4. spacer 3.1|1573265|34|NC_004557|CRISPRCasFinder,CRT matches to KM983331 (Clostridium phage phiCT19406B, complete genome) position: , mismatch: 0, identity: 1.0

ttaatccagataaaatatattctcttacagcaat	CRISPR spacer
ttaatccagataaaatatattctcttacagcaat	Protospacer
**********************************

5. spacer 3.3|1573393|35|NC_004557|CRISPRCasFinder,CRT,PILER-CR matches to KM983328 (Clostridium phage phiCT453B, complete genome) position: , mismatch: 0, identity: 1.0

agatgttttaacaacgataatgaatgcttacaaaa	CRISPR spacer
agatgttttaacaacgataatgaatgcttacaaaa	Protospacer
***********************************

6. spacer 3.5|1573525|35|NC_004557|CRISPRCasFinder,CRT,PILER-CR matches to KM983327 (Clostridium phage phiCT453A, complete genome) position: , mismatch: 0, identity: 1.0

gagctacaagataaatacaaagatgtggatttagt	CRISPR spacer
gagctacaagataaatacaaagatgtggatttagt	Protospacer
***********************************

7. spacer 7.2|1592104|34|NC_004557|CRISPRCasFinder,CRT matches to KM983328 (Clostridium phage phiCT453B, complete genome) position: , mismatch: 0, identity: 1.0

atatagagaaatcacttaaaataatagaatttgc	CRISPR spacer
atatagagaaatcacttaaaataatagaatttgc	Protospacer
**********************************

8. spacer 7.8|1592105|34|NC_004557|PILER-CR matches to KM983328 (Clostridium phage phiCT453B, complete genome) position: , mismatch: 0, identity: 1.0

atatagagaaatcacttaaaataatagaatttgc	CRISPR spacer
atatagagaaatcacttaaaataatagaatttgc	Protospacer
**********************************

9. spacer 3.6|1573590|36|NC_004557|CRISPRCasFinder,CRT,PILER-CR matches to KM983327 (Clostridium phage phiCT453A, complete genome) position: , mismatch: 1, identity: 0.972

atatgcaatagccatatttcaaagatattcaaagga	CRISPR spacer
atatgcaatagccctatttcaaagatattcaaagga	Protospacer
************* **********************

10. spacer 4.2|1577900|36|NC_004557|PILER-CR matches to KM983327 (Clostridium phage phiCT453A, complete genome) position: , mismatch: 1, identity: 0.972

gtacaaaacttacctcaaaaccatctaccagattta	CRISPR spacer
gtacaaaacttacctcaaaaccatttaccagattta	Protospacer
************************.***********

11. spacer 4.4|1577899|38|NC_004557|CRISPRCasFinder matches to KM983327 (Clostridium phage phiCT453A, complete genome) position: , mismatch: 1, identity: 0.974

gtacaaaacttacctcaaaaccatctaccagatttaga	CRISPR spacer
gtacaaaacttacctcaaaaccatttaccagatttaga	Protospacer
************************.*************

12. spacer 1.6|1217671|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to KM983329 (Clostridium phage phiCT9441A, complete genome) position: , mismatch: 2, identity: 0.943

ttgttcgtaactgttaaagctatctttctttatgc	CRISPR spacer
ttgttcgtaactgttaaaattatctttctttatgc	Protospacer
******************..***************

13. spacer 2.8|1571254|34|NC_004557|CRISPRCasFinder,CRT matches to KM983327 (Clostridium phage phiCT453A, complete genome) position: , mismatch: 2, identity: 0.941

accctaattgtagaactacaatagttccgtattt	CRISPR spacer
atcctaattgtagaactgcaatagttccgtattt	Protospacer
*.***************.****************

14. spacer 2.17|1571256|34|NC_004557|PILER-CR matches to KM983327 (Clostridium phage phiCT453A, complete genome) position: , mismatch: 2, identity: 0.941

accctaattgtagaactacaatagttccgtattt	CRISPR spacer
atcctaattgtagaactgcaatagttccgtattt	Protospacer
*.***************.****************

15. spacer 1.14|1218204|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013848 (Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence) position: , mismatch: 3, identity: 0.914

gctttaactcttaaaaaagataaagttctaaattc	CRISPR spacer
gatttaactcttaaaaaagatagagttttaaattc	Protospacer
* ********************.****.*******

16. spacer 2.4|1570993|34|NC_004557|CRISPRCasFinder,CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 3, identity: 0.912

gttttgcagaggttcgagaaaaacttaaatatta	CRISPR spacer
ggtttgcagaggttagagaaaaactaaaatatta	Protospacer
* ************ ********** ********

17. spacer 2.13|1570995|34|NC_004557|PILER-CR matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 3, identity: 0.912

gttttgcagaggttcgagaaaaacttaaatatta	CRISPR spacer
ggtttgcagaggttagagaaaaactaaaatatta	Protospacer
* ************ ********** ********

18. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 5, identity: 0.844

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
cgatagcttctactaattcgttcttattcatt	Protospacer
. * *************** **.*********

19. spacer 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 6, identity: 0.833

aggttgggactgttggggaaatgaagtaaatcttaa--	CRISPR spacer
aggttgggattgttggggaaatgaagt--tttttagat	Protospacer
*********.*****************   *.***.  

20. spacer 2.16|1571190|36|NC_004557|PILER-CR matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 6, identity: 0.833

aggttgggactgttggggaaatgaagtaaatcttaa--	CRISPR spacer
aggttgggattgttggggaaatgaagt--tttttagat	Protospacer
*********.*****************   *.***.  

21. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 6, identity: 0.812

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
ctacttcttcaactaattctttttcattcatt	Protospacer
.**   **** *************.*******

22. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 6, identity: 0.812

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
ctacactttttactaattctgttttattcatt	Protospacer
.** * .**.********** ***********

23. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
ctacactttttactaattctgttttattcatt	Protospacer
.** * .**.********** ***********

24. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MT774380 (CrAssphage cr1_1, complete genome) position: , mismatch: 6, identity: 0.812

ttaaagcttctactaattcttttttat-tcatt	CRISPR spacer
caaaagcttctactaattattatttatatcaa-	Protospacer
. **************** ** ***** ***  

25. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 6, identity: 0.824

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
ctacttcttcaactaattctttttcattcattgt	Protospacer
.**   **** *************.*********

26. spacer 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT matches to MN693162 (Marine virus AFVG_25M233, complete genome) position: , mismatch: 7, identity: 0.806

aggttgggactgttggggaaatgaagta----aatcttaa	CRISPR spacer
gggttgggattgttggggaaatgaggtataagaatc----	Protospacer
.********.**************.***    ****    

27. spacer 2.16|1571190|36|NC_004557|PILER-CR matches to MN693162 (Marine virus AFVG_25M233, complete genome) position: , mismatch: 7, identity: 0.806

aggttgggactgttggggaaatgaagta----aatcttaa	CRISPR spacer
gggttgggattgttggggaaatgaggtataagaatc----	Protospacer
.********.**************.***    ****    

28. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
gcaaaccttcaactaattcttttttatatagt	Protospacer
 .*** **** **************** .* *

29. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 7, identity: 0.781

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
ttaaatcttctactaattcttgtttctcggtc	Protospacer
***** *************** *** *. .*.

30. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.781

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
tagataattctaataattcttttttattaatt	Protospacer
* .* . ***** *************** ***

31. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NZ_AP017969 (Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttaaagcttctactaattcttttttattcatt-	CRISPR spacer
ataaagcttttagtaattc-tttttatgaactt	Protospacer
 ********.** ****** *******  *.* 

32. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NC_007021 (Staphylococcus phage Twort, complete genome) position: , mismatch: 7, identity: 0.781

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
tacaagcttctactaattcttgcttaataagt	Protospacer
*  ****************** .*** * * *

33. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MT151386 (Staphylococcus virus Twort, complete genome) position: , mismatch: 7, identity: 0.781

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
tacaagcttctactaattcttgcttaataagt	Protospacer
*  ****************** .*** * * *

34. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 7, identity: 0.794

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
cgatagcttctactaattcgttcttattcattaa	Protospacer
. * *************** **.*********. 

35. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 7, identity: 0.794

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
ctacactttttactaattctgttttattcattat	Protospacer
.** * .**.********** ***********.*

36. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.794

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
ctacactttttactaattctgttttattcattat	Protospacer
.** * .**.********** ***********.*

37. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to MT774380 (CrAssphage cr1_1, complete genome) position: , mismatch: 7, identity: 0.794

ttaaagcttctactaattcttttttat-tcattgt	CRISPR spacer
caaaagcttctactaattattatttatatcaagg-	Protospacer
. **************** ** ***** ***  * 

38. spacer 7.2|1592104|34|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP024873 (Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence) position: , mismatch: 7, identity: 0.794

atatagagaaatcacttaaaataatagaatttgc	CRISPR spacer
atttctaaatatcacttaaaataactgaatttgc	Protospacer
** *  *.* **************. ********

39. spacer 7.8|1592105|34|NC_004557|PILER-CR matches to NZ_CP024873 (Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence) position: , mismatch: 7, identity: 0.794

atatagagaaatcacttaaaataatagaatttgc	CRISPR spacer
atttctaaatatcacttaaaataactgaatttgc	Protospacer
** *  *.* **************. ********

40. spacer 1.25|1218935|37|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 8, identity: 0.784

gtgttacatctcccaatttctcctcataatactttaa	CRISPR spacer
catttgaatttcctaatttctcctcataatactttag	Protospacer
   **. **.***.**********************.

41. spacer 1.25|1218935|37|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 8, identity: 0.784

gtgttacatctcccaatttctcctcataatactttaa	CRISPR spacer
catttgaatttcctaatttctcctcataatactttag	Protospacer
   **. **.***.**********************.

42. spacer 2.3|1570929|34|NC_004557|CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 8, identity: 0.765

gcttaggctaggagctacctctttttttattttt	CRISPR spacer
taatttgctagttgctacctctttttttatttta	Protospacer
   *  *****  ******************** 

43. spacer 2.6|1571123|35|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 8, identity: 0.771

tttcttgcaaccatagcacatagttgcagcataac-	CRISPR spacer
ctatttgcaaccatagaacatggttgcag-gtatcg	Protospacer
.* .************ ****.******* .** * 

44. spacer 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT matches to MN693344 (Marine virus AFVG_25M232, complete genome) position: , mismatch: 8, identity: 0.778

aggttgggactgttggggaaatgaagtaaatcttaa-----	CRISPR spacer
gggttgggattgttggggaaatgaggta-----taagaata	Protospacer
.********.**************.***     ***     

45. spacer 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT matches to AP013454 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S33-C36) position: , mismatch: 8, identity: 0.778

aggttgggactgttggggaaatgaagtaaatcttaa-----	CRISPR spacer
aggttgggattgttggggtaatgaagt-----ttgattgtt	Protospacer
*********.******** ********     **.*     

46. spacer 2.12|1570931|34|NC_004557|PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 8, identity: 0.765

gcttaggctaggagctacctctttttttattttt	CRISPR spacer
taatttgctagttgctacctctttttttatttta	Protospacer
   *  *****  ******************** 

47. spacer 2.15|1571125|35|NC_004557|PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 8, identity: 0.771

tttcttgcaaccatagcacatagttgcagcataac-	CRISPR spacer
ctatttgcaaccatagaacatggttgcag-gtatcg	Protospacer
.* .************ ****.******* .** * 

48. spacer 2.16|1571190|36|NC_004557|PILER-CR matches to MN693344 (Marine virus AFVG_25M232, complete genome) position: , mismatch: 8, identity: 0.778

aggttgggactgttggggaaatgaagtaaatcttaa-----	CRISPR spacer
gggttgggattgttggggaaatgaggta-----taagaata	Protospacer
.********.**************.***     ***     

49. spacer 2.16|1571190|36|NC_004557|PILER-CR matches to AP013454 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S33-C36) position: , mismatch: 8, identity: 0.778

aggttgggactgttggggaaatgaagtaaatcttaa-----	CRISPR spacer
aggttgggattgttggggtaatgaagt-----ttgattgtt	Protospacer
*********.******** ********     **.*     

50. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MF186604 (Methanosarcina spherical virus, complete genome) position: , mismatch: 8, identity: 0.75

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
gtgtcctttctactaattcttttttagtcatg	Protospacer
 *.   .******************* **** 

51. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to AP014322 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C37, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
gtcttacatctactaataattttttattcatt	Protospacer
 *   .* *********  *************

52. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to NC_019749 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.02, complete sequence) position: , mismatch: 8, identity: 0.75

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
tttttccttctactaactctttattattcggt	Protospacer
**    **********.***** ******. *

53. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MK614706 (Gammaproteobacteria virus GOV_bin_2604, complete genome) position: , mismatch: 8, identity: 0.75

---ttaaagcttctactaattcttttttattcatt	CRISPR spacer
tgttccaa---tctactatttcttttttagtcata	Protospacer
   *. **   ******* ********** **** 

54. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MT325768 (Psychrobacillus phage Perkons, complete genome) position: , mismatch: 8, identity: 0.75

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
gaagtgtttctagtaattcttttatattcaat	Protospacer
  *. *.***** ********** ****** *

55. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 8, identity: 0.765

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
ttaaatcttctactaattcttgtttctcggtctt	Protospacer
***** *************** *** *. .*. *

56. spacer 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT matches to MN693129 (Marine virus AFVG_25M62, complete genome) position: , mismatch: 8, identity: 0.778

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
ttttacattttctttaaacataaataaaaaatcttt	Protospacer
   *.**.**********.***************  

57. spacer 5.5|1580119|36|NC_004557|PILER-CR matches to MN693129 (Marine virus AFVG_25M62, complete genome) position: , mismatch: 8, identity: 0.778

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
ttttacattttctttaaacataaataaaaaatcttt	Protospacer
   *.**.**********.***************  

58. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.765

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
cattttctgtgatttcttcatcttcaaaaaatac	Protospacer
* **.***** *************** *   ** 

59. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NC_011732 (Gloeothece citriformis PCC 7424 plasmid pP742404, complete sequence) position: , mismatch: 8, identity: 0.765

ctttctctgttatttcttcatcttcatattttaa------	CRISPR spacer
ctttatctgttctttcttcatc------ttttaaaactcc	Protospacer
**** ****** **********      ******      

60. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.765

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
cattttctgtgatttcttcatcttcaaaaaatac	Protospacer
* **.***** *************** *   ** 

61. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NC_011732 (Gloeothece citriformis PCC 7424 plasmid pP742404, complete sequence) position: , mismatch: 8, identity: 0.765

ctttctctgttatttcttcatcttcatattttaa------	CRISPR spacer
ctttatctgttctttcttcatc------ttttaaaactcc	Protospacer
**** ****** **********      ******      

62. spacer 7.1|1592039|35|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

gtgctgcacttctagaacttaaattacattccttt	CRISPR spacer
gtgctgcacttcttgaacttaatttatttttaatc	Protospacer
************* ******** ***. **.  *.

63. spacer 7.7|1592040|35|NC_004557|PILER-CR matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

gtgctgcacttctagaacttaaattacattccttt	CRISPR spacer
gtgctgcacttcttgaacttaatttatttttaatc	Protospacer
************* ******** ***. **.  *.

64. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MH617682 (Microviridae sp. isolate ctcb14, complete genome) position: , mismatch: 9, identity: 0.719

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
ataatgcttttactaattctttttcggacgct	Protospacer
 *** ****.**************..  *..*

65. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
gcaaaccttcaactaattcttttttatatagttc	Protospacer
 .*** **** **************** .* * .

66. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.735

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
tagataattctaataattcttttttattaatttc	Protospacer
* .* . ***** *************** *** .

67. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to AP014322 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C37, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
gtcttacatctactaataattttttattcatttt	Protospacer
 *   .* *********  ************* *

68. spacer 5.3|1580250|34|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP015331 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpN31, complete sequence) position: , mismatch: 9, identity: 0.735

aagagttgcacttttttatataatctcttttagg	CRISPR spacer
aaaatactgtcttttttatgtcatctcttttagg	Protospacer
**.*  .   *********.* ************

69. spacer 5.3|1580250|34|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP039041 (Piscirickettsia salmonis strain Psal-072 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

aagagttgcacttttttatataatctcttttagg	CRISPR spacer
aaagatgtcacttttttaaataatgtcttttact	Protospacer
**...*  ********** ***** *******  

70. spacer 5.3|1580250|34|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP039048 (Piscirickettsia salmonis strain Psal-073 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

aagagttgcacttttttatataatctcttttagg	CRISPR spacer
aaagatgtcacttttttaaataatgtcttttact	Protospacer
**...*  ********** ***** *******  

71. spacer 5.7|1580251|34|NC_004557|PILER-CR matches to NZ_CP015331 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpN31, complete sequence) position: , mismatch: 9, identity: 0.735

aagagttgcacttttttatataatctcttttagg	CRISPR spacer
aaaatactgtcttttttatgtcatctcttttagg	Protospacer
**.*  .   *********.* ************

72. spacer 5.7|1580251|34|NC_004557|PILER-CR matches to NZ_CP039041 (Piscirickettsia salmonis strain Psal-072 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

aagagttgcacttttttatataatctcttttagg	CRISPR spacer
aaagatgtcacttttttaaataatgtcttttact	Protospacer
**...*  ********** ***** *******  

73. spacer 5.7|1580251|34|NC_004557|PILER-CR matches to NZ_CP039048 (Piscirickettsia salmonis strain Psal-073 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

aagagttgcacttttttatataatctcttttagg	CRISPR spacer
aaagatgtcacttttttaaataatgtcttttact	Protospacer
**...*  ********** ***** *******  

74. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

75. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

76. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgatgctgttatttctttaccttcatatttaat	Protospacer
 *  . ************.*.********** * 

77. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

78. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

79. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

80. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

81. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

82. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgatgctgttatttctttaccttcatatttaat	Protospacer
 *  . ************.*.********** * 

83. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

84. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

85. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 9, identity: 0.735

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atgaggctgttatttctttaccttcatatttaat	Protospacer
 *    ************.*.********** * 

86. spacer 1.33|1219466|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to MT457553 (Shewanella phage Thanatos-2, complete genome) position: , mismatch: 10, identity: 0.714

atatgtgatgatgaattagagaaagtgcttgaaag	CRISPR spacer
tctagtgatgatgaattagataaattgctaaatgg	Protospacer
 .  **************** *** **** .* .*

87. spacer 1.33|1219466|35|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to MT457552 (Shewanella phage Thanatos-1, complete genome) position: , mismatch: 10, identity: 0.714

atatgtgatgatgaattagagaaagtgcttgaaag	CRISPR spacer
tctggtgatgatgaattagataaattgctaaatgg	Protospacer
 .  **************** *** **** .* .*

88. spacer 2.7|1571188|36|NC_004557|CRISPRCasFinder,CRT matches to MN693242 (Marine virus AFVG_25M170, complete genome) position: , mismatch: 10, identity: 0.722

aggttgggactgttggggaaatgaagtaaatcttaa	CRISPR spacer
tggttgggattgttggggtaatgaagtatgacaagt	Protospacer
 ********.******** ********* . *  . 

89. spacer 2.16|1571190|36|NC_004557|PILER-CR matches to MN693242 (Marine virus AFVG_25M170, complete genome) position: , mismatch: 10, identity: 0.722

aggttgggactgttggggaaatgaagtaaatcttaa	CRISPR spacer
tggttgggattgttggggtaatgaagtatgacaagt	Protospacer
 ********.******** ********* . *  . 

90. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MF001361 (Enterococcus phage EF5, partial genome) position: , mismatch: 10, identity: 0.688

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
cagttttttctactagtccttttttattcaat	Protospacer
. .   .********.*.************ *

91. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MN693045 (Marine virus AFVG_25M135, complete genome) position: , mismatch: 10, identity: 0.688

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
ctaaagcctttactaattctttttctaagtct	Protospacer
.******.*.**************.     .*

92. spacer 4.1|1577836|32|NC_004557|PILER-CR matches to MF001358 (Enterococcus phage EF1, partial genome) position: , mismatch: 10, identity: 0.688

ttaaagcttctactaattcttttttattcatt	CRISPR spacer
cagttttttctactagtccttttttattcaat	Protospacer
. .   .********.*.************ *

93. spacer 4.3|1577835|34|NC_004557|CRISPRCasFinder matches to MF186604 (Methanosarcina spherical virus, complete genome) position: , mismatch: 10, identity: 0.706

ttaaagcttctactaattcttttttattcattgt	CRISPR spacer
gtgtcctttctactaattcttttttagtcatgca	Protospacer
 *.   .******************* ****   

94. spacer 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 10, identity: 0.722

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
caaaaaattttcattaaatataaaaaaaaaatcttg	Protospacer
 .* . *.**** *********** ********* .

95. spacer 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.722

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
caaaaaattttcattaaatataaaaaaaaaatcttg	Protospacer
 .* . *.**** *********** ********* .

96. spacer 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 10, identity: 0.722

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
caaaaaattttcattaaatataaaaaaaaaatcttg	Protospacer
 .* . *.**** *********** ********* .

97. spacer 5.1|1580118|36|NC_004557|CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 10, identity: 0.722

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
caaaaaattttcattaaatataaaaaaaaaatcttg	Protospacer
 .* . *.**** *********** ********* .

98. spacer 5.4|1580314|34|NC_004557|CRISPRCasFinder,CRT matches to NZ_AP018284 (Chondrocystis sp. NIES-4102 plasmid plasmid3 DNA, complete genome) position: , mismatch: 10, identity: 0.706

ttggagatttaaaggaagcttataaatatttcta	CRISPR spacer
tcagtattttaaaataagcttataaatatttaat	Protospacer
*..* . ******. ****************   

99. spacer 5.5|1580119|36|NC_004557|PILER-CR matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 10, identity: 0.722

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
caaaaaattttcattaaatataaaaaaaaaatcttg	Protospacer
 .* . *.**** *********** ********* .

100. spacer 5.5|1580119|36|NC_004557|PILER-CR matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.722

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
caaaaaattttcattaaatataaaaaaaaaatcttg	Protospacer
 .* . *.**** *********** ********* .

101. spacer 5.5|1580119|36|NC_004557|PILER-CR matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 10, identity: 0.722

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
caaaaaattttcattaaatataaaaaaaaaatcttg	Protospacer
 .* . *.**** *********** ********* .

102. spacer 5.5|1580119|36|NC_004557|PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 10, identity: 0.722

ggatgcactttctttaaatataaataaaaaatctaa	CRISPR spacer
caaaaaattttcattaaatataaaaaaaaaatcttg	Protospacer
 .* . *.**** *********** ********* .

103. spacer 5.8|1580315|34|NC_004557|PILER-CR matches to NZ_AP018284 (Chondrocystis sp. NIES-4102 plasmid plasmid3 DNA, complete genome) position: , mismatch: 10, identity: 0.706

ttggagatttaaaggaagcttataaatatttcta	CRISPR spacer
tcagtattttaaaataagcttataaatatttaat	Protospacer
*..* . ******. ****************   

104. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to NZ_CP022140 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
cgaaatctgttattttttcatctttatatacgag	Protospacer
*    **********.********.**** . *.

105. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to MH617769 (Siphoviridae sp. isolate ctjc_2, complete genome) position: , mismatch: 10, identity: 0.706

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atactgatattattttttcattttcatattttat	Protospacer
 * ..  *.******.*****.*********** 

106. spacer 6.4|1589907|34|NC_004557|CRISPRCasFinder matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 10, identity: 0.706

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
aaatatcttttatttctttatcttcatatccgta	Protospacer
   * *** *********.**********..  *

107. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to NZ_CP022140 (Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
cgaaatctgttattttttcatctttatatacgag	Protospacer
*    **********.********.**** . *.

108. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to MH617769 (Siphoviridae sp. isolate ctjc_2, complete genome) position: , mismatch: 10, identity: 0.706

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
atactgatattattttttcattttcatattttat	Protospacer
 * ..  *.******.*****.*********** 

109. spacer 6.5|1589971|34|NC_004557|CRISPRCasFinder matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 10, identity: 0.706

ctttctctgttatttcttcatcttcatattttaa	CRISPR spacer
aaatatcttttatttctttatcttcatatccgta	Protospacer
   * *** *********.**********..  *

110. spacer 8.1|1595980|35|NC_004557|CRISPRCasFinder matches to MN694169 (Marine virus AFVG_250M458, complete genome) position: , mismatch: 10, identity: 0.714

gtacctgtgccaagactattaaatttttttgctaa	CRISPR spacer
aattttgtgcctagactatgaaatttttttccaat	Protospacer
.  ..****** ******* ********** * * 

111. spacer 1.19|1218532|36|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010123 (Escherichia coli strain C5 plasmid A, complete genome) position: , mismatch: 11, identity: 0.694

tttaaatctggtttattttttacattcttccaatcc	CRISPR spacer
tttaaagctggtttatttttaacattaaggagttta	Protospacer
****** ************* *****     . *. 

112. spacer 1.28|1219135|38|NC_004557|PILER-CR,CRISPRCasFinder,CRT matches to NC_011737 (Gloeothece citriformis PCC 7424 plasmid pP742402, complete sequence) position: , mismatch: 11, identity: 0.711

tatctaactcaatattttcttcttttacatcctgttta	CRISPR spacer
tttctaactgaatatcttcttcttttacaactccccat	Protospacer
* ******* *****.************* *.. ..  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 688595 : 695591 8 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_2 1133918 : 1184898 69 Clostridium_phage(95.59%) capsid,holin,terminase,tail,portal NA
DBSCAN-SWA_3 1651758 : 1658683 8 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_4 1663820 : 1682779 22 Clostridium_phage(50.0%) capsid,holin,plate,head,tail,portal NA
DBSCAN-SWA_5 2053688 : 2060217 11 Streptococcus_phage(44.44%) integrase,transposase attL 2049646:2049662|attR 2064981:2064997
DBSCAN-SWA_6 2237703 : 2286330 72 Clostridium_phage(91.43%) protease,capsid,holin,plate,head,terminase,tail,portal NA
DBSCAN-SWA_7 2348328 : 2360631 12 Caulobacter_phage(37.5%) protease NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_004557.1|WP_155274208.1|2278842_2279016_-|hypothetical-protein 2278842_2279016_- 57 aa aa NA HTH_XRE NA 2237703-2286330 yes