CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NC_001263	Deinococcus radiodurans R1 chromosome 1, complete sequence	1 crisprs	cas3,c2c9_V-U4,DEDDh,csa3	0	0	2
NC_001264	Deinococcus radiodurans R1 chromosome 2, complete sequence	0 crisprs	csa3	0	0	0
NC_000958	Deinococcus radiodurans R1 plasmid MP1, complete sequence	1 crisprs	NA	1	1	2
NC_000959	Deinococcus radiodurans R1 plasmid CP1, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_001263_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_001263_1

2600001-2600090

Orphan

Consensus_repeat	Method
CGGGCAAGGACGTGACCCTCACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_001263_1

>merge|NC_001263|1|2600001-2600090|CRISPRCasFinder
CGGGCAAGGACGTGACCCTCACCCGGCGCGGCGAGCAGCTCAGCGGGCGCATCGGCGGGCAGGTGGACGGCAAGGACGTGACCCTCACCC

>NC_001263|1|1|2600001-2600090|CRISPRCasFinder
CGGGCAAGGACGTGACCCTCACCC	GGCGCGGCGAGCAGCTCAGCGGGCGCATCGGCGGGCAGGTGG
ACGGCAAGGACGTGACCCTCACCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_001263.1\|WP_010889211.1\|2594386_2595028_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|223282
NC_001263.1\|WP_027480273.1\|2602975_2603854_-\|membrane-protein	unknown	unknown	gnl\|CDD\|282131
NC_001263.1\|WP_010889215.1\|2598289_2598655_+\|ferredoxin	unknown	unknown	gnl\|CDD\|225945
NC_001263.1\|WP_027480277.1\|2595279_2596152_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238563
NC_001263.1\|WP_034350859.1\|2605754_2607164_+\|DUF4403-family-protein	unknown	unknown	gnl\|CDD\|379578
NC_001263.1\|WP_010889226.1\|2609310_2610507_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NC_001263.1\|WP_034350892.1\|2592646_2593270_+\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NC_001263.1\|WP_034350868.1\|2594134_2594374_+\|exodeoxyribonuclease-VII-small-subunit	unknown	unknown	gnl\|CDD\|224636
NC_001263.1\|WP_027480270.1\|2608493_2609246_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226222
NC_001263.1\|WP_051618895.1\|2601908_2602895_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235736
NC_001263.1\|WP_010889221.1\|2603978_2605049_-\|nitric-oxide-synthase-oxygenase	unknown	unknown	gnl\|CDD\|226804
NC_001263.1\|WP_034350861.1\|2605095_2605533_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|223509
NC_001263.1\|WP_010889207.1\|2590823_2592560_+\|NAD-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|237414
NC_001263.1\|WP_027480276.1\|2597256_2597982_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224045
NC_001263.1\|WP_010889224.1\|2607173_2608217_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225218
NC_001263.1\|WP_010889218.1\|2600253_2601717_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224160
NC_001263.1\|WP_034350872.1\|2593394_2594078_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NC_001263.1\|WP_162177772.1\|2598724_2599642_+\|hypothetical-protein	unknown	unknown	unknown
NC_001263.1\|WP_027480271.1\|2608228_2608465_-\|hypothetical-protein	unknown	unknown	unknown
NC_001263.1\|WP_034350864.1\|2596163_2597165_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439

Protein	Function_ID	Function_description	E-value
NC_001263.1\|WP_010889211.1\|2594386_2595028_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|223282	COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism].	2.58005e-40
NC_001263.1\|WP_027480273.1\|2602975_2603854_-\|membrane-protein	gnl\|CDD\|282131	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase. Members of this family have a predicted zinc binding motif characteristic of neutral zinc metallopeptidases (Prosite:PDOC00129).	1.10849e-153
NC_001263.1\|WP_010889215.1\|2598289_2598655_+\|ferredoxin	gnl\|CDD\|225945	COG3411, COG3411, Ferredoxin [Energy production and conversion].	5.51703e-24
NC_001263.1\|WP_027480277.1\|2595279_2596152_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238563	cd01143, YvrC, Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	4.66555e-71
NC_001263.1\|WP_034350859.1\|2605754_2607164_+\|DUF4403-family-protein	gnl\|CDD\|379578	pfam14356, DUF4403, Domain of unknown function (DUF4403). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 455 and 518 amino acids in length. There is a single completely conserved residue W that may be functionally important.	3.26493e-117
NC_001263.1\|WP_010889226.1\|2609310_2610507_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NC_001263.1\|WP_034350892.1\|2592646_2593270_+\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	2.60755e-57
NC_001263.1\|WP_034350868.1\|2594134_2594374_+\|exodeoxyribonuclease-VII-small-subunit	gnl\|CDD\|224636	COG1722, XseB, Exonuclease VII small subunit [DNA replication, recombination, and repair].	9.04705e-15
NC_001263.1\|WP_027480270.1\|2608493_2609246_+\|hypothetical-protein	gnl\|CDD\|226222	COG3698, COG3698, Predicted periplasmic protein [Function unknown].	4.96726e-128
NC_001263.1\|WP_051618895.1\|2601908_2602895_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235736	PRK06196, PRK06196, oxidoreductase; Provisional.	8.48585e-169
NC_001263.1\|WP_010889221.1\|2603978_2605049_-\|nitric-oxide-synthase-oxygenase	gnl\|CDD\|226804	COG4362, COG4362, Nitric oxide synthase, oxygenase domain [Inorganic ion transport and metabolism / Amino acid transport and metabolism].	0
NC_001263.1\|WP_034350861.1\|2605095_2605533_-\|YjbQ-family-protein	gnl\|CDD\|223509	COG0432, COG0432, Uncharacterized conserved protein [Function unknown].	3.45048e-62
NC_001263.1\|WP_010889207.1\|2590823_2592560_+\|NAD-dependent-malic-enzyme	gnl\|CDD\|237414	PRK13529, PRK13529, oxaloacetate-decarboxylating malate dehydrogenase.	0
NC_001263.1\|WP_027480276.1\|2597256_2597982_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	1.77387e-96
NC_001263.1\|WP_010889224.1\|2607173_2608217_+\|CAP-domain-containing-protein	gnl\|CDD\|225218	COG2340, COG2340, Uncharacterized protein with SCP/PR1 domains [Function unknown].	1.29583e-33
NC_001263.1\|WP_010889218.1\|2600253_2601717_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|224160	COG1239, ChlI, Mg-chelatase subunit ChlI [Coenzyme metabolism].	1.25577e-118
NC_001263.1\|WP_034350872.1\|2593394_2594078_-\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	2.11165e-37
NC_001263.1\|WP_034350864.1\|2596163_2597165_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.80536e-79

>NC_001263.1|WP_162177772.1|2598724_2599642_+|hypothetical-protein
MLGGAQAQGTQAAPVTGAPLFERLSPAERQLLLSVAGVSSGDQFQPGRLLPGLPFPAPALPGQQVIGSVEQSDGIRVVVRTSLEANAAQQTAEKALRAAGWQNLYPGVDNGGLIFQSSPTEQYVSPLCRPGVPGSLTVFAFESEPGSSQVSYQYSSLGAQGCPANMPQEDPTQLNFYAPYRNQTVYRPADRLQERGVKLPRLAAPEGAQVEATNLTSGDTELTAYTSVYGTQSTETLRQHYAAALQAQGWQLVDTRTLAGQSVTRFTFRAGKEEGVGTLSLKARTDLKDTTRPPRHDVQLELQLP
>NC_001263.1|WP_010889215.1|2598289_2598655_+|ferredoxin
MTNGPKYFRTSGHLLLCRGSSCQQRNSVLLHKALWNALERDGLAYYKQGGSVRLTDSGCLGACKFGPTLCVYRERDGQLEQAWYAGVDFPLARAVAQAVHEGGELPDQGRYGGSPDNAGNP
>NC_001263.1|WP_027480276.1|2597256_2597982_+|ATP-binding-cassette-domain-containing-protein
MRGVDATFRTGEFAAIIGPNGAGKSTLLRALLGLSGLEAGEVRLNGRPLRTWNRAERSRRLAYLAQSEPLPPETRVRDVVTLGRGAGEWRWGLLPTRPWSEADEEAVNRALDRTDTRRFEDRRVSELSGGEGQRVALARALAAGPELLLLDEPTNHLDLAYTLDLMRSLRREVEAGLGVIAVLHDLNLAARADRLLLLSRGEVLATGTPAEVLTPEHIAAAYGVRVDVTEQAGRPLVIPAD
>NC_001263.1|WP_034350864.1|2596163_2597165_+|iron-ABC-transporter-permease
MSLSARRSRVYLASGTALLLALLGLAVVLGTGLGSVNIAPGAVLTALWQGVTRQALAGDAVIIWQIRLPRVVMGVLVGAALSVCGGAFQGVFRNPLSDPYLLGVASGAGLGATVALTLGWPHALIPLAALLTALGAVAATLLLAREGRRFPPTRLILSGVVVGSVLSAATTALMLRGEDRARQVLAYTLGDLSFSGWRDVLTVLPYVGLGCGALLLLARALDTLQLGDLTARSLGVPVERLRLLVVACASLATAGAVAYVGIIGFVGLIVPHLVRLAFGAGHRTLLPLSGLLGGSLLVLADLLARTTPLSQVGIVTTLLGGPFFLWLLRRERG
>NC_001263.1|WP_027480277.1|2595279_2596152_+|ABC-transporter-substrate-binding-protein
MRTFSALLLTLSAGLATSASAVRYPLTLTDDLGRKVTIKAEPQRLISVLPSTSETLCAIGACNKLVGVDDYSDFPAQVAKLPKVGGLYDPNVEKIVSLKPDLVIVSKYGKLTEQLEQLGVPTVAVNPETYADVFSKTTLLGKIVNREAQAKALNISMQREIARVEILTKNAARKPLTYFEIDPTPYSIGPNSFMGVLLTKAGARNVIPASLGDFPKIDPELIVKQNPQLILGTDLKTASARPGWQNVAAVKSGKVIAIPKELNTILGRPGPRLPQALRGLAKIVHPELFR
>NC_001263.1|WP_010889211.1|2594386_2595028_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MLWSMTDGATPATPPTAAPEERFPHVNPLVYRFVVDVTFLPVLLTGMHIDVHGREHVPPPGTPLVVAANHQSALDPFLIARALPPGRYLQFMAKRELFVPVIGDIIRAGGSFPVDRESNDVGAIRTSLRILKAGGTVGIFPQGTRGGQELHGGAALIAARGRAPILPAGISHDGKRWVVRFGEPLPARGGIKANTEELGRRLQVLAQPVGRHL
>NC_001263.1|WP_034350868.1|2594134_2594374_+|exodeoxyribonuclease-VII-small-subunit
MSAPTSYRDAYARLSRIAAELETGEADLDRVLPLLEEARAAYAECKGRIEAVRGVLSGDWGQDAAQDPEEGEEDEDDAF
>NC_001263.1|WP_034350872.1|2593394_2594078_-|flavin-reductase-family-protein
MSHTHFDLTALPQSARYKLLTATVVPRPIAWVGTRGSGETGKLGFNLAPYSFFGLMGSEPPVVAFAPGDRADGTPKDSALNIGSGGEFTVSLVSAALAAVMNLSATDFPRGMDEAQALGIQLAPGRRVQVPHVAAAPAALECREVQTVSIGRTRIILGEVLGLWLREDAVLDAEKHHVDTAALDLVGRMGGRGTYTHTRDTFELGRLTYAQWQEQWQAREEGDHSEK
>NC_001263.1|WP_034350892.1|2592646_2593270_+|DNA-3-methyladenine-glycosylase-2-family-protein
MPAVLPPLTDHAGAVAHLSRDPVLAQVTSLCGELPVLAPTPDPFGRLVRSVAGQQLSVKAAQAIYGRLEGLPGGVVPAALLKVSGDDLRGVGLSWAKVRTVQAAAAAAVSGQIDFAHLSGQPDELVIAELVQLPGIGRWTAEMFLLFALARPDVFSSGDLALRQGVERLYPGEDWRDVTARWAPYRSLASRYLWANSARMQAGGAPL
>NC_001263.1|WP_010889207.1|2590823_2592560_+|NAD-dependent-malic-enzyme
MPKSPPVSRYYDVKRDEQGQRYIEVKVTGLALLQNPLLNKTTGFTPEERRELGLEGLIPPHISSFEEQKHRTYLRYLEAPTDLARHEYLRALQDRNEVLYYAILEDHLEEMLPIIYTPTVGEAVKLYSNNYRYPRGFTVSTNDIERVEEMLDNVTVNDVRMIVATDSSAILGIGDQGFGGMAISIGKLSLYTAAGGVGPDKTLPVELDVGTNRQDLIDDPLYLGVHHRRWQGQQYDEFVDAFVEAVSARYPKAIIQWEDFSRGTAFRVLERYRKVVPSFNDDIQGTGAMALAGLLRASRMKGEFLTEQVFVVVGAGAAGIGVASAIRQGLEAEGLAPEEAGRRVYVVDRYGLLMEGQPDLEPQQMPFVRRRGDLEGWTFGGEYPTLHEVLVHARATALLGFTGVPGLFRQEDIEAMLAHTPRPIVFPLSNPSSHVEARPSDIVAWTRGGAIVATGSPFPDVPYDNERIPVGQGNNAFIFPGLGFGAVVSRAREITDNMVMAAALTLAEYTTQHHPHLVYPPISELRELSIHVAVRVAEQAIQDGVCAERRVRNMDREQLAALIRERAWLPRPLPLRRE
>NC_001263.1|WP_010889218.1|2600253_2601717_+|sigma-54-interacting-transcriptional-regulator
MTAQTTAQPKARTLGELLQTPEYAGRKPFDGQRRLVQDEVRDNLTRKLRSGEELFPGVVGYDDTVIPQLVNALLARQNFILLGLRGQAKSRILRAITELLDPEVPVIDGVDMPDDPLNPIGAEGQHLLEAHGMELPIRWLPRADRYVEKLATPDVTVADLIGDVDPIKAARLGTSLGDTRSMHFGLLPRANRGIFAVNELADLSPKVQVALFNILQEGDVQIKGYPIRLELDVMLVFSANPEDYTARGKIVTPLKDRIGSEIRTHYPTDVQLGMDITAQEAVKEEGVVVPPFIAELIEDIAFQAREDGRIDKLSGVSQRLPISLMELACANAERRSLVSGDAPVVRVTDVYAGLPAITGKMELEYEGELKGADNVAKDLIRKAAGAAYARSYGSADTRELEKWFDQGNVFRFPQGGDASAALKATGEVPGLSDFAAQVAGSSDDAVRVSAAEFILEGLYGRKKLSRAEELYAAPEPELKRERGGRWN
>NC_001263.1|WP_051618895.1|2601908_2602895_-|SDR-family-NAD(P)-dependent-oxidoreductase
MTHGNSSQSDRPRIISPLAPRADAAEVVRGVDLKGKTAVVTGGASGLGTETARALLLAGAHVILPVRDRAKGERVAAELRQSTGGTVELVDLDLGSLASVRRGAAEIRQLAPRIHILINNAGVMATPQSRTVDGFETQFGTNHLGHFLLTRELLPALMAAAPARVVALTSSGHRRSDIVWDDLNFERRPYDPWDAYGQSKTANALFAVGLTQRYADQGLTANAVHPGGIMTGLQKFVPLEDQRRMGWQDEHGTLNPVFKTPAEGASTSVWAATSPQLYGVGGLFLEDLQHSTPLDESAPNPLFGYKPYALDHESARRLWALSEALVGE
>NC_001263.1|WP_027480273.1|2602975_2603854_-|membrane-protein
MDWRNLPGGGNIEDRRGGGGLPGGGLAVGGGIGGLILALIAYFFGIDPSVVTGGGQQQSPAQTQAQSQAQGGQAEDEDYQFADRIVASTDRTWTQIFQQSNRQYTKPTLVLFSRSVSSACGQASSATGPFYCPLDSKLYLDTSFFNLMQRQLGGGGDFAYSYVIAHEVGHHVQNELGIAEQVERKQRAARSEAEQNSYSVRLELQADCFAGVWGNSVKGREAANLTEDDVREAINTAAAIGDDTLQRQGQGMVVPDSFTHGTSQQRVNWFMRGFQTGNPNQCDTFSAAYNQL
>NC_001263.1|WP_010889221.1|2603978_2605049_-|nitric-oxide-synthase-oxygenase
MSCPAAAVLTPDMRAFLRRFHEEMGEPGLPARLRAVEEAGLWWPTSAELTWGAKVAWRNSTRCVGRLYWEALSVRDLRELNTAQAVYEALLQHLDDAFCGGHIRPVISVFGPGVRLHNPQLIRYADDPINADFVDKLRRFGWQPRGERFEVLPLLIEVNGRAELFSLPPQAVQEVAITHPVCLGIGELGLRWHALPVISDMHLDIGGLHLPCAFSGWYVQTEIAARDLADVGRYDQLPAVARALGLDTSRERTLWRDRALVELNVAVLHSFDAAGVKLADHHTVTAHHVRFEEREARAGREVRGKWSWLVPPLSPATTPLWSRRYRAREESPRFVRARCPFHTPTVHASTGHAPTG
>NC_001263.1|WP_034350861.1|2605095_2605533_-|YjbQ-family-protein
MWTQHQLTLPPQRRGFHLITREVVAAVPELAGVQVGLLHVWIQHTSASLTVNENASPDVRRDFERYFNHAVPDGWREFEHTLEGPDDMAAHIKASVLGPSLLLPVSGGRLALGRWQGIFLCEHRDHASARRLVLTLQGEEKQAGK
>NC_001263.1|WP_034350859.1|2605754_2607164_+|DUF4403-family-protein
MRRVLTPLLLTLGMTLPAALPTAEAASTLTVPVHVPLAGVQQAANAQVPQEFARVDQTQSLLGGAVQVRVRGTVTRTAQVSVKADGDALVLSVPIRAEFRAEPGGALASLARNFGGAATITLRLTPYVTPTWEVGVRASAEHRWTDPLAVDLGRGLKLSVQSLVDPQVRAQLDKLTAQIEQQVREGADLRRRAGTLWARAQRPWPLPTPEPAYALVRPLGLGVTPPRLTPDALKLDVGATLDLGAALGQPPATVKVSPLPPLKVGPLSAPGIELSVPLRLPYPELSALAARYAAQQTLTLPVPGSPVLRVTGVQVQPVGTRLRVSVQARLDGPLGLSLRATTDVTGTPAVSADGRTVSLRDVEVETRREGLTGKAVAWLADARAQAFVTRAAHFDLGPLLARAQAQAQSKLPFTPLPGVMVGGQVGALSVQSMAVQPAALVVTARAAGRLQAQVNAGELVDSGRGNGGR
>NC_001263.1|WP_010889224.1|2607173_2608217_+|CAP-domain-containing-protein
MRRLSLLLVALLGGVAPLARAQVQVIPFPGPAPAPVAPAPAPVPPPPPSAPAAAPALPVAPAPAPVAQSTCAPALPALHLAAADIAAGADAYRAVTNRAGAPSQFRYWKVSPAQLPATVRELCQRGFVGYGTAPSGSLMIVLGARWPGGTPAEASAPASPVAAAPAPVAAAPVVLAPAAPAPAAPAPSSRPPTSPTLSSPPVTAAAPAAPVPGPLGELLAGINAARTQGRRCGGVQRPPVPPLVVDARLSKAAQEHAEAMVAQGFAEHVNPRTRSTPESRARAQGFSGRVSENIRYGTPTVDGALIWWLGSAVHCTSLMSRDWTHMGAGSAVQNDQSSFWVLVLGRE
>NC_001263.1|WP_027480271.1|2608228_2608465_-|hypothetical-protein
MFSALWTFLRELLLALIGQPSRPGPTRQEQEAELAQREALRGRQAPTSAWDAARQVGAEVGKAAIWQPTDAPRRKKKD
>NC_001263.1|WP_027480270.1|2608493_2609246_+|hypothetical-protein
MGPMSRFAPATPLLLSLLLTSCSPAQGVRVERITGGGMLYTVATVDPARDQLTLHWLNPATGKPYSSFAQLGSRLGKQGKKLLFATNSGIYMPGPKPLGLHVEGGKTLVGLNNAGKGGGNFALLPNGVFWLRGKKAGVTETQAYRKLGLAPDYATQSGPLLVANGKLHPDFNKSGTSFKVRSGVGVCGGGKVRFAISAGPVNFYSFATFFRDTLGCPDALYLDGSISAYATPDTDTQFTEFAGIWAVTAR
>NC_001263.1|WP_010889226.1|2609310_2610507_+|acetate-kinase
MWTLVLNSGSSSLKFALLNPASGEVRLSGLAERLGTPAAAVKLEHSGQQESRSLEGGSYDAALGEVLRELETLGMRSAVRAVGHRVVHGGERFSAPVLVTPEVLEAVRACVPLAPLHNPANIVGIEAAQQAFPKLPHVAVFDTAFHQTMPEVAYRYAVPEAWYSQHGVRRYGFHGTSHAYVAGRAAEMLQRPLPTLNLITAHLGNGASVCAVAGGRSVDTSMGLTPLEGLIMGSRSGDVDPGLHDYLARQAGLSLSEITAALNKESGLLGLSGLTNDMRELEKAALTGHRGARLALGAFIYRLAKCMAGMAVALGRVDGVVFTGGIGENSRTVRGETLRRLGVLGLHLDEEANKALPRGDVGVISLPGGPVALVIPTHEELMIARETAVIVGGRGYAL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

608447 : 617563

Bacillus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010887241.1\|608447_609449_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	4.4e-06	31.6
WP_010887242.1\|609506_610175_-	SCO family protein	NA	NA	NA	NA
WP_027479516.1\|610294_610825_+	M23 family metallopeptidase	A0A0Y0AH42	Bacillus_phage	6.6e-09	39.1
WP_051618766.1\|610925_611747_-	AAC(3) family N-acetyltransferase	O64018	Bacillus_phage	1.8e-61	50.0
WP_010887245.1\|611904_612144_-	hypothetical protein	NA	NA	NA	NA
WP_081816010.1\|612409_614140_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	4.9e-53	41.2
WP_010887247.1\|614141_614738_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	3.1e-07	31.2
WP_010887248.1\|614734_616381_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_010887249.1\|616377_616944_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_027479514.1\|616957_617563_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.2e-10	30.2

DBSCAN-SWA_2

1611697 : 1676607

Lactobacillus_phage(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010887312.1\|1611697_1612120_+\|transposase	IS200/IS605-like element ISDra2 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.0e-28	44.3
WP_010888231.1\|1612106_1613333_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	1.4e-94	49.6
WP_164927972.1\|1613271_1614327_-	hypothetical protein	NA	NA	NA	NA
WP_034350162.1\|1614524_1615625_+	decarboxylating 6-phosphogluconate dehydrogenase	M1T2E7	Synechococcus_phage	4.6e-65	41.2
WP_010888234.1\|1615621_1617394_+	glucose-6-phosphate dehydrogenase	E3SKF6	Synechococcus_phage	1.6e-83	38.1
WP_010888235.1\|1617491_1618430_+	glucose-6-phosphate dehydrogenase assembly protein OpcA	NA	NA	NA	NA
WP_027479871.1\|1618562_1621361_+	insulinase family protein	A0A2K9V7S4	Bandra_megavirus	2.0e-19	30.0
WP_027479873.1\|1623730_1624426_-	VIT family protein	NA	NA	NA	NA
WP_010888240.1\|1624594_1625761_+	DUF1624 domain-containing protein	NA	NA	NA	NA
WP_034350166.1\|1625775_1626807_+	hypothetical protein	NA	NA	NA	NA
WP_051618799.1\|1626899_1628123_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_034350242.1\|1629147_1630410_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_010888245.1\|1630498_1630933_-	hypothetical protein	NA	NA	NA	NA
WP_010888246.1\|1630929_1631484_-	DinB family protein	NA	NA	NA	NA
WP_010888247.1\|1631518_1632271_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_010888248.1\|1632421_1633726_+	homoaconitate hydratase family protein	NA	NA	NA	NA
WP_010888249.1\|1633790_1634264_-	hypothetical protein	NA	NA	NA	NA
WP_010888250.1\|1634323_1634698_-	hypothetical protein	NA	NA	NA	NA
WP_010888251.1\|1634910_1635240_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010888252.1\|1635288_1635822_+	3-isopropylmalate dehydratase small subunit 1	NA	NA	NA	NA
WP_010888253.1\|1635807_1636182_-	hypothetical protein	NA	NA	NA	NA
WP_010888254.1\|1636304_1637330_+	DUF1517 domain-containing protein	NA	NA	NA	NA
WP_010888255.1\|1637393_1637975_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_164927973.1\|1638017_1638155_-	hypothetical protein	NA	NA	NA	NA
WP_063653036.1\|1638200_1639433_+\|transposase	transposase	A0A218MNH3	uncultured_virus	1.7e-36	28.1
WP_164927974.1\|1639429_1641082_-	hypothetical protein	NA	NA	NA	NA
WP_010888257.1\|1641151_1642138_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_010888258.1\|1642221_1642578_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_010888259.1\|1642577_1643291_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_162177678.1\|1643352_1644435_+\|protease	protease complex subunit PrcB family protein	NA	NA	NA	NA
WP_034350172.1\|1646546_1647992_+	amidase	NA	NA	NA	NA
WP_051618798.1\|1648040_1649096_+	branched-chain-amino-acid transaminase	NA	NA	NA	NA
WP_010888264.1\|1649286_1651101_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	2.2e-40	24.6
WP_051618797.1\|1652101_1654399_+	EAL domain-containing protein	NA	NA	NA	NA
WP_010888267.1\|1654521_1655298_-	DUF554 domain-containing protein	NA	NA	NA	NA
WP_051618796.1\|1655567_1656710_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_010888269.1\|1656821_1658633_+	N-acetylmuramoyl-L-alanine amidase	S5M9Y4	Brevibacillus_phage	4.0e-05	36.5
WP_027479881.1\|1658646_1660119_-	CHASE2 domain-containing protein	NA	NA	NA	NA
WP_010888271.1\|1660102_1661395_-	FecR domain-containing protein	NA	NA	NA	NA
WP_027479883.1\|1661805_1663698_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	6.8e-48	28.1
WP_027479884.1\|1663701_1663986_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_010888275.1\|1665726_1666284_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_010888276.1\|1666371_1666692_+	hypothetical protein	NA	NA	NA	NA
WP_162177673.1\|1666771_1666948_+	hypothetical protein	NA	NA	NA	NA
WP_010888278.1\|1667001_1667496_+	DinB family protein	NA	NA	NA	NA
WP_027479887.1\|1667462_1667984_+	hypothetical protein	NA	NA	NA	NA
WP_010888282.1\|1668837_1669584_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA
WP_027479889.1\|1669673_1670369_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_165439377.1\|1672328_1673054_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.0e-33	39.0
WP_010888286.1\|1673347_1674307_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_010887311.1\|1674971_1676198_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	1.6e-95	49.9
WP_010887312.1\|1676184_1676607_-\|transposase	IS200/IS605-like element ISDra2 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.0e-28	44.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_000958

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_000958_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_000958_1

55162-55240

Orphan

Consensus_repeat	Method
CTCTGCTTCGCAGCTTTGCAAGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_000958_1

>merge|NC_000958|1|55162-55240|CRISPRCasFinder
CTCTGCTTCGCAGCTTTGCAAGTCCCGCAGCACGTCTCTTTTGCCTCTCGCTCCGCTCTGCTTCGCAGCTTTACAAGTC

>NC_000958|1|1|55162-55240|CRISPRCasFinder
CTCTGCTTCGCAGCTTTGCAAGTC	CCGCAGCACGTCTCTTTTGCCTCTCGCTCCG
CTCTGCTTCGCAGCTTTACAAGTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_000958.1\|WP_010884006.1\|51332_52883_+\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NC_000958.1\|WP_010884007.1\|60424_60826_-\|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM	unknown	unknown	gnl\|CDD\|225946
NC_000958.1\|WP_027480379.1\|61415_62414_-\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|237724
NC_000958.1\|WP_027480382.1\|53286_55053_+\|alkaline-phosphatase	unknown	unknown	gnl\|CDD\|224699
NC_000958.1\|WP_010884019.1\|65290_66274_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NC_000958.1\|WP_010884017.1\|55927_56575_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NC_000958.1\|WP_149358002.1\|64247_64763_+\|transposase	unknown	unknown	gnl\|CDD\|225949
NC_000958.1\|WP_010884004.1\|47826_49563_-\|SgrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226909
NC_000958.1\|WP_164928031.1\|42169_44539_+\|DUF11-domain-containing-protein	unknown	unknown	gnl\|CDD\|307488
NC_000958.1\|WP_164928032.1\|44900_47798_+\|hypothetical-protein	unknown	unknown	unknown
NC_000958.1\|WP_010884044.1\|39588_41664_+\|DUF11-domain-containing-protein	unknown	unknown	unknown
NC_000958.1\|WP_081816081.1\|60822_61461_-\|dihydroxyacetone-kinase-subunit-L	unknown	unknown	gnl\|CDD\|274099
NC_000958.1\|WP_010884049.1\|56571_57780_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NC_000958.1\|WP_063653100.1\|49617_50874_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NC_000958.1\|WP_010884051.1\|62873_63404_+\|hypothetical-protein	unknown	unknown	unknown
NC_000958.1\|WP_155896399.1\|50946_51114_-\|hypothetical-protein	unknown	unknown	unknown
NC_000958.1\|WP_010884062.1\|44539_44977_+\|hypothetical-protein	unknown	unknown	unknown
NC_000958.1\|WP_162177805.1\|58133_60134_+\|hypothetical-protein	unknown	unknown	unknown
NC_000958.1\|WP_010884048.1\|55472_55931_+\|hypothetical-protein	unknown	unknown	unknown
NC_000958.1\|WP_164928030.1\|41816_42122_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_000958.1\|WP_010884006.1\|51332_52883_+\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.54873e-33
NC_000958.1\|WP_010884007.1\|60424_60826_-\|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM	gnl\|CDD\|225946	COG3412, COG3412, Uncharacterized protein conserved in bacteria [Function unknown].	2.14118e-46
NC_000958.1\|WP_149358002.1\|64247_64763_+\|transposase	gnl\|CDD\|225949	COG3415, COG3415, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.58205e-26
NC_000958.1\|WP_027480379.1\|61415_62414_-\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|237724	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional.	0
NC_000958.1\|WP_010884017.1\|55927_56575_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	9.21638e-73
NC_000958.1\|WP_010884019.1\|65290_66274_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.15912e-13
NC_000958.1\|WP_010884004.1\|47826_49563_-\|SgrR-family-transcriptional-regulator	gnl\|CDD\|226909	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	0
NC_000958.1\|WP_164928031.1\|42169_44539_+\|DUF11-domain-containing-protein	gnl\|CDD\|307488	pfam01345, DUF11, Domain of unknown function DUF11. A domain of unknown function found in multiple copies in several archaebacterial proteins. Conserved N-terminal lysine and C-terminal asparagine with central asp/glu suggests that many of these domain may contain an isopeptide bond.	2.22528e-15
NC_000958.1\|WP_081816081.1\|60822_61461_-\|dihydroxyacetone-kinase-subunit-L	gnl\|CDD\|274099	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the subunit homologous to the E. coli YcgS subunit.	1.40088e-73
NC_000958.1\|WP_027480382.1\|53286_55053_+\|alkaline-phosphatase	gnl\|CDD\|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	1.2414e-164
NC_000958.1\|WP_010884049.1\|56571_57780_+\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	5.61897e-14
NC_000958.1\|WP_063653100.1\|49617_50874_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.18972e-77

>NC_000958.1|WP_027480382.1|53286_55053_+|alkaline-phosphatase
MRKTLLLLALLSASASAAKLQVYPYDGANFIAGQRFDLRVEAEDVTSFKDAVITLDGQPVTGLVKTTTKPTSVEWTLRNQSLAAGEHVLNVKFSDAGGEVTRSVHWTAQASAPSGLAALFQKPKAKNVILFIADGMGWNTLNAAKMVAYPYNPANGMPTGKLAMETGLSSMATITTSSYDSALADSANTASSIATGQKIQVNALNVYGDNTPDTLDNPRAETITAMLKRSMGKSVGIVSSAFGVDATPAAFAAYTRRRGDYQAIADQYFKGDVKPDVLLIGGSRDFIPSTAPGSRRKDNTDWISESQKMGYQFVSTRTELNAATGNKLFGLFNIDNIPSYLDRVQFKGAETIGDFKDMPYLWDSTQKAVQTLEKNPNGFFLMVEAGMVDKYEHPLDWNRAVWDVLELDKAVAWAKDYAKSHPDTLILVTADHAHSMSVYGGYDATKGPGKREAVGVYEKAGFPTYGDKRDANGFPLSETARTYAVGFAATPDYCETYLGRRVFLDPTVSNGKTGAEAAYVPNPKICDEGAVQRTGNLDPGSSQGVHTADPLPLFVFGAGAENFSGVMDQTEIFFGMARALGLDATKNK
>NC_000958.1|WP_010884006.1|51332_52883_+|sensor-domain-containing-diguanylate-cyclase
MTTAAPQPQDNYARLLALARYEILDTLPEDSFDRLVQLTRHILRTPAAYINFVDQSRQWTKACVGAERDSKPLSESMCAWTILQDAPLVVENARLDRRFSHMQLVTGEASLQMYAGVPLTTPSGHRIGTLCVTDNQCHPLGDEDIQALQDLAALVMTELELRAANQELQRDLQAASCQSEELRRTLAQAKTLEGVSALTDLQLPPEEMMLAAAALLSDAVASDLTSLLLFDGPVLRAQAAHTHSRLSPAQRRYLELAVAALPNLAAGFTWSVRDAAVPVYVNDYAAHPHAQAEMVAGGVTQVAWVPLGTRSGVTSGLMSVRLGDHPVARWRSGDCALLEAAGRTIRSALDRWLLTELASQQARQDVLTGALNRRAFEEDFPVRPAPFSLALLDLDGFKAINDREGHSQGDKVLRVFAETLNVELPGGASLYRVGGDEFVVLLNSDDVPLFDEQLDIALLAARQVVAGSVGVSLGMAHSHEAAGPALVQLADARMYALKERRRAQRDTQHQDATKTL
>NC_000958.1|WP_155896399.1|50946_51114_-|hypothetical-protein
MVENDTISLAELDQAMQSFSNPQSKLLGVVLNKVPRSREGYAHYSYSNAEQPTTI
>NC_000958.1|WP_063653100.1|49617_50874_+|MFS-transporter
MWRQLHPNIKVRIINSFLTRMVGGAIFPFMAVYFAHYLGAGLAGLLLMALVAVQFVAGLYGGGLADAWGRRRTLLAGEVLKLLAFAALLLGNLWTPLPWVTFAALAVINVANGLINPAAEAMLVDVSTPDTRTFMYVVNYWAVNASLLLGTLLGGWLYQDHFAALLAGLLGMSFVTLFLAWRFMSETLGGLRRTAAQVRESVGVRPLLRSYAQVMTDRPYVLFTLGFVLLMTIEFGRQNFIPVHLAQSFPAQVLWGVNLTGIKVMSLVTAINTLLIVVLTLPVSHWVGKRELRPVMALGFLLFAVGFAALYGSLNLWALVAGSVVLSIGELLYVPARQTLLADLIPEEKRGSYLAVNGQVFTLAKWLATLGVPLGAQIGGPWMGVLIVLFGVLAVVLSLRGLRAASPERTPERSAPTF
>NC_000958.1|WP_010884004.1|47826_49563_-|SgrR-family-transcriptional-regulator
MTPFAAGPDWPYLELRAALLARDGEQSSYALTLNDLRGWWSKSDKTVKRTLARLQAEGKVTYTPGRGRGRTSRLSFSRDLRPELLTLTRELARRQAAGELARLSRLPFPKGWVLTPDVQRIFGLSASAGGVDRLRTVVFREYTSLDPLTAFATVEAHLLLQVFDGLTRYDPATQTLEPHLAHHWGCSDDGLTWTFYLRKGVPFHHGRTLDASDVRASLERVQRGAAWLLPELLEVRSDHPYRVSLRLARPDAFLPRRLAATQALIVPRDVPPDPQQLIGTGAFQWQPLEGGVRLSAFDAHFAGRPLIDEVELYQVEPLTEAPTLHLEGAAPQKVAEWQEETGVHFLIWNAGQPAAHSAALRAAVFELHDIRRFWEETRQPWPLLSAQSFYPRRSRDRPARVHSDERARSLLAAAGPQPPLRLWVLDREDAVAEARWLSRRAAGFGLEITVELYDLHDEVTRDTPSDLMMMGEVSGPDEQLSFWTALKQPELFFRKLLPREVLAQVDTELEEYRLAQTFAGREAVIDRVEALLLEGHHVHLTHHRVKQRTVHPLLRDVWPDAYGRISFRRLWVGGPAQD
>NC_000958.1|WP_164928032.1|44900_47798_+|hypothetical-protein
MNSVIRSRTLRRLAALPDAALSLRGDSGTLRLVGNLDPGDYGLASALPVDGAENPGSVKLPLDGSQLRQTNQFTLVVETDPASTELPRVNGVPVSAAQLGHVRPSADGQRERRSYYALPVHPGKNLIEFGREQVTLNYAGPTVRYEVTPLSAQADGSTPVRVRIRALDAAGLPAEQPTVTLRTSAEPLRPDARPGEVGYQLELHNGEGVLELRPQITPTALRLELLRDQQVSEFRVDVRPGGAALGVGLVSAAVGLGGTLPLAQRLHVQARAYYEGPLAGGQLYVAADSAGLPREDSGKARGLTYGDSSSEAVPLRGSDPVAALYEHPAFRVAYRDQEVPVNVVPLPGRMTALSASTKGNVRVSGFAALLPGDLVQAQVLRPDGTRLLRLGQEDIAPASETLTVVTRDAQTGTELGRRVLTRGVEYVLDERTGIVSLAQPLDATDAELHRVEVLASYRLSAPLPGARPLRRAGRGGDAQRRFGVAAVSLDGRGTIGAAGELRRGGLQVSGRALLSGGVQAEAALDGHWRSSDALSVRAHYQDEAYQGLGKGEAGLRASGRYQVMLGERLGAALDATYQRAPSKQGSDEQDGGGQGEVGALLTYRAQPWTVGGGLRWGFGSRSGLSAAGQLGYEGKQVSLSVTHSQPLSGTVRPTSDFKVAYRLTPHAALALTDHYVWGDAHSAALTLDTRLGNVNYAVAYELPGAGGAGNRARFGVSTSVPLGARTTLGLRGSALYDLQSGGSELGAGADLRWQGERAVATLGGDLAWRSGQLQAVVRGGVSGDLSERLNVSADATAELGARQGLKFGVGYAYRSAGFSSLGYGRYAGGSLGGSRPEASAGVSAEYRQGALTVRGGVDARALLSDPGSLTYQPSLGLRAELNARFSVGGWARALVQPASSQVLPGYGLEAGVQVLPGTWLSAGYNLAGFEGLPSAGLYTRPGAYLRLDVALDEGAGKKTGKAHRR
>NC_000958.1|WP_010884062.1|44539_44977_+|hypothetical-protein
MAFRTPLFSLVTLSALLSMAPARAAAPALTPPTQGAEQALSVSTLRLSFDLSAAREEGQELGGAALWQGGDLLVAQPVPAGAKVVPGSSRLGDRPLPDPTRSARGVLYWTVPLRDLPAGASELSYQVTHTQAARRAARRGAEPAW
>NC_000958.1|WP_164928031.1|42169_44539_+|DUF11-domain-containing-protein
MDANGDGQPQPGEQAEQLTLGAGASAAVLLVAVVPAGASGAALVNLTAQCPGGAQDDNNVAQLVATPPPHLELRKAFGAERLRPGDQTGVTVTATNTGAGAAPDVVLEDPLGQQLDAGLAYVPGSARTDRGRLEYSADGASWQAAEPAAVRGVRVQAGTLEPGEQTTLTFRMEARPSAENLLLNNVATVSSVTGEGAQASDTLDVRFLPGVALGPLGQPLAPEGTAADGQTLVFAVTGEPACFDHTVQNTGDVTDMFRLSVSVTQGQATPQLLGAAGEPLPQPFTLAPGEQRQVRVCYDLRSAQPLTAQVIAQGERGTSNATADLIRRVETQRPGLRKTVSKVGAPDWAPGSAVTSGDELEYTLSVTNPYAQPLAGVQVLDPLPAGTEFVSASDGGALLGAASAAQVAWTLGDLPAGATRTLTLRVRVGRDVRDDQELRNVFELTSSELPAPLHSNAASAVVWNTAPLLSKTLDRRDAAPGDLLTYTLTLKNPSASTALVDLVITDTPAAALKYVTGTSRLAGVPTADPAENGGELQWRVPRLGAGESLTLSYGLRVLPGAAGELLNTAVLRGYGEQTHAVAVASNRAQVSATLKLLNFAPLGDVLGTVYLDANGNRRLDEGETVLSGARVALAGGRLALTDSRGRYHFGNVDLGTQALRLDLGSVPAVRDPGTQVVQVQGLTTVDFPLRALAALQVKRDLRVQVGELTLTKRLTEIPGGYRVTTTLQSPVALAEVAWTDPLPAGAALVSGQNVRRERLSAGSTTWTYDLRWSGPPSAALTDPVLKVVK
>NC_000958.1|WP_164928030.1|41816_42122_+|hypothetical-protein
MKSMLRLCLPLCCAAACLAGAAPAGTVIQNQASAQFSLPGGGAGLVNSEPAQLLVNAVCRVQVTPDGTPQAPGQRLTVRAGEPATLRYELSNAATVPPPSP
>NC_000958.1|WP_010884044.1|39588_41664_+|DUF11-domain-containing-protein
MKANMKLLALLCALGSGAAGAASTNTMTLAGTEITNQAQATFTVGGATQTTNSDAVKIVVNAVPSYTITNDGTEASPAYTSTVNVNSNATYSYSVKNTGNTPIQVAVGATVGTGSSAITQVNYSGAATGTVPTTGAATIQTITINPDQTVTLTQTFVTPAAPGTYYVNPTGVSMQYASVAANPDGSALTTATLDQTSNRTDVNNVNKTTVLTNVPLLGSPTLTNTVVPSSPNPLPPTGTTTPGTGTGPVGSGNGPAESTGPAYTGIGSTSGTQPPVVVDASGNQYAYPKADAETVNPDSVTMTTIITNPNPTAATYELVPDLSGLPAGVTVTFTDANGNPLPDTDGNGRPEVTAGPNGGTATYRVVVTYPDTESAAAVAGPIRIPVGVDGNRDGIVDATVTYNVLLSNLKFGNTNGTALGVSDVPVTRTVTQPSVTTAVVFPMDLFNDGAYDGNYALSGSTPIGPVKYYATNPDTDGDGVLSPAELAALPAEIASTGAVPVKTEKTVYAVVTIPAGQAPGDYMVTQTATGSLSGTTKSFNTDKVTVTSPNGSLLIAKRVTTPGTTTPSLNATANPGDAVSYTVTATNNYNTSLYGLVLRDPSSNNLGSFSSSNVFGFIKPSSLRATVSGVSGATVLYRTSNLNTWAAQPTVDANTTWVEVGVDTNNNSQIDSGDVFPPNAVITLTLQGTVK
>NC_000958.1|WP_010884048.1|55472_55931_+|hypothetical-protein
MNRRTVLKLLGAAPGALWLAPFGRAGAQSAAASLNFNELYGKVTVRGAEYSSKIKALNGRKVTMSGYMAPPLKPKLDFFVLTRQPMSTCPFCTTAADWPADIVLVIMPPGQELEPSVRGLNVTGRLEIGVKRDDETGFVSLVRLYAERVRDA
>NC_000958.1|WP_010884017.1|55927_56575_+|ABC-transporter-ATP-binding-protein
MSRQLSGRNLSIQHGAEVRLTYPDFSWPAGTHLALTGPSGTGKTSLLNAVAGLLRPSTGQLCYGEHDLTALSEAGRDAFRRREVGYVFQDFHLMPGLSAQENVELGLRVAGVRNAGALAQTALRRLDLAGRLQSKPWQLSTGERQRVAIARAVAHRPGLLLVDEPTAHLDRERAAGAMSLLREVATELGATLVVVTHDEAVALSLPEHFRIRGAS
>NC_000958.1|WP_010884049.1|56571_57780_+|ABC-transporter-permease
MRLAWWTALKTLRHRLGALIITVLAVALATATALVVPLVSRQVERGAQDAAQVFDLLVTAKGSGTQAVMSSLFYLDVPIGNVPHSVYQKLLSAPGTRRAVPIALGDNYAGFPVVGTSAQFFDQRLKPAAPPYFRVAQGNIFARVHDAVVGAAAARQSGLKVGSTFRSAHGLGGADTEGGAAPSTHDEPYTVTGILAPTGGPVDRAVLTPIETLWEAHGEAAASKRDVTAVLYSAENLAGIYTTAGQINAGKDAMAVFPGQVFAQARQTLMQGQAAYAGLSVLVLAIAALTVTLSVYTSGLERRRTVALLRALGAGRGTVFALVLLETGLTVTLGALLGIGLSLLVSRVGGNVLGQRLGFTLAAPELTWPLASRALGLIPLGILAALPPALQALRVSPLRHLH
>NC_000958.1|WP_162177805.1|58133_60134_+|hypothetical-protein
MQRLLSTVLVLSLAVGASAQQSNGQVSFTAPKGWAASSSQGGVLQYTHTSAGGVDGALLIGQDMPLPNDPVRWLEQTARSLAGGQALSEQAVQSEQLASGLTALYKVLIGGTPQQPVAYVAALLHNGTSGVLVVFLSSDVENKNALEKDVDAVVESIRLSGKPTQTAGTTAAAGAGAKPAEPNLPTVNPMNAAQFKAAGGNPARQIIPDEFRCYVKRKGDGLSPDLTVQVLPGGTYRTVYGNGTYQINKDRKITWQGGPLNKADGSLDFDDYGQAFSLSDVSEDTQDTSLNFECYQRGPRENVALHNFKLRTPKPGSYSCVLADGQGDRGALEVGADNTYRFGGAAGRYRVDYRSDQDSARSSLTLRGEGDLEESGFYSEDETGLRVFTLTVPTGGDLISRSSTAWTCTAVAKPTPAPSLYGSEKAPAPPQGSGGLNGNFVHNRAGKLVPVLQIGPDFTSSMVLGSECPGNVCWAFAFFNPNGYVYTQEPKVDASEADCTRTYPNGLPRCEVYRVTGNTIQIGDRAPVPFTLTGSGLNLDGQRYDKLQPMDTLILRGSYESLEVTPNLYLGGSTSSLALTFGEGRTFSLSSDRSTTVMVPGATVSNSNRAATLTGTYKFSGNTVELTYRDGRVVRQFAALPVEGGKITPTLLRIGGVTYSPSIDKK
>NC_000958.1|WP_010884007.1|60424_60826_-|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM
MSVTLVIVSHSAKLAEGVAEFVGQMNAGQVELEAVGGTDDGLLGTSATRIHAALERATQAGGEALVLMDLGSARLRSELALDLLREEQRVRVALAEAPLVEGAFLAAFEAATGGDLRTVQAAAEEGGALKKMG
>NC_000958.1|WP_081816081.1|60822_61461_-|dihydroxyacetone-kinase-subunit-L
MGRASGHACAAVGRVNSEQTRQFLELYARKIQAADQHLTELDSAIGDADHGSNMERGMTAVVGTLPASGTPSDLLRSAAMTLISKVGGASGPLYGTALLRAATSMAGKDEWTQDDLQEALEAAYQGLLERGKAQPGDKTMLDVWRPALDALPGGVGAAAQAASSAAEATRDLTARKGRASYLGERSAGHVDPGSVSSALLFEALAEALEQRP
>NC_000958.1|WP_027480379.1|61415_62414_-|dihydroxyacetone-kinase-subunit-DhaK
MKKIMNATADLVRESCEGFAAAHADLVKPQSDPLFLYRTGDLRGRVALISGGGSGHEPLHAGYIGRGMLTAACPGEVFTSPVPDQMLAAIRHTHGGQGALLIVKNYTGDVMNFELAAELAAAEGIEVASVVIGDDVAVQDSTWTAGRRGVGGTVLLEKIAGAAAEAGAELAEVKQVAQIVMDGVRSMGLALTGATVPAAGKPNFTLADDEIELGIGIHGEPGRERQQLRPADELVDALLDPVTADLDLKRGEEVIALTNGMGGTPLLELYVAHGHVVNHLADRGVKVVRHLVGNYVTSLEMQGLSVTLLRASSEQLRLWDAPVVTPALRWGA
>NC_000958.1|WP_010884051.1|62873_63404_+|hypothetical-protein
MNPNLRTGALILASAFAPVVAGGAGQTAPTFAKSAFCQKYQCKLLSTETVAPGLTEQRYFLNAVVSNDPRTVVSTFMRGGQVVGAQYVTGTQDAFFAWNLGKPEPEMFAELVKTVTGKRPTPQFFEGIEDQCSRVYGTEKSAQIPGTTSRLSCVVSQEFSSAHGSGAARLSLRVHR
>NC_000958.1|WP_149358002.1|64247_64763_+|transposase
MPQVWQPNRLTRQQLEERRLAAQPLLNNPEWTTASIAEHFGVKPSTVRVWRVRLSERGSLEATLSSGRPAWLNDAQVAEIIELLQQGPDPERFPDGRWTTERVRDVIGLKFDVWYDHDWIGKLLRRWGFSWQKAEKHAIEQNPEKIDAWLEEELPALEKKGRSWRNDRLGR
>NC_000958.1|WP_010884019.1|65290_66274_+|IS4-family-transposase
MIDAPRVNHHDLSAHMPGMSTPQGKKRRADRTFRDEQLDRGFFIALLVVHLPPGKVLLSLDRTNWEHGETPINFLVLGAVVHGFTLPLIWVPLDQSGNSHTYARMWLVLKLLRAWPAKRWLGLVADREFIGAEWFRFLRRQGIKRAIRIRQTDMLDDMKGKEWFEHVQHGHFHEIGEKVFVFGELMRVVATRSPVGDLVIIATDFSARKTWRLYKQRWSIECTFSSFKKRGFDLERTGMTERSRLQRLFGLVTLAWMFCLRLGVWLSQTWPIPVLKHGRRAVSLVRHGAQHLVDALRWKPQQFMAILEVFIQAFCPPGAAESEVVTY

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_000958_1	1.1\|55186\|31\|NC_000958\|CRISPRCasFinder	55186-55216	31	NC_001263.1	2619328-2619358	1	0.968
NC_000958_1	1.1\|55186\|31\|NC_000958\|CRISPRCasFinder	55186-55216	31	NC_001263.1	218424-218454	2	0.935

1. spacer 1.1|55186|31|NC_000958|CRISPRCasFinder matches to position: 2619328-2619358, mismatch: 1, identity: 0.968

ccgcagcacgtctcttttgcctctcgctccg	CRISPR spacer
ccgcagcacgtctcttttgcttctcgctccg	Protospacer
********************.**********

2. spacer 1.1|55186|31|NC_000958|CRISPRCasFinder matches to position: 218424-218454, mismatch: 2, identity: 0.935

ccgcagcacgtctcttttgcctctcgctccg	CRISPR spacer
ccgcagcacgtctcttttgctgctcgctccg	Protospacer
********************. *********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NC_000958_1	1.1\|55186\|31\|NC_000958\|CRISPRCasFinder	55186-55216	31	NC_000958	Deinococcus radiodurans R1 plasmid MP1, complete sequence	55186-55216	1.0
NC_000958_1	1.1\|55186\|31\|NC_000958\|CRISPRCasFinder	55186-55216	31	NZ_CP050118	Deinococcus radiodurans strain BNK-50 plasmid pMP1, complete sequence	146645-146675	1.0
NC_000958_1	1.1\|55186\|31\|NC_000958\|CRISPRCasFinder	55186-55216	31	NZ_CP050122	Deinococcus radiodurans strain BND-54 plasmid pMP1, complete sequence	91142-91172	1.0
NC_000958_1	1.1\|55186\|31\|NC_000958\|CRISPRCasFinder	55186-55216	31	NZ_CP031502	Deinococcus radiodurans strain R1 dM1 plasmid pMP1, complete sequence	101703-101733	1.0

1. spacer 1.1|55186|31|NC_000958|CRISPRCasFinder matches to NC_000958 (Deinococcus radiodurans R1 plasmid MP1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgcagcacgtctcttttgcctctcgctccg	CRISPR spacer
ccgcagcacgtctcttttgcctctcgctccg	Protospacer
*******************************

2. spacer 1.1|55186|31|NC_000958|CRISPRCasFinder matches to NZ_CP050118 (Deinococcus radiodurans strain BNK-50 plasmid pMP1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgcagcacgtctcttttgcctctcgctccg	CRISPR spacer
ccgcagcacgtctcttttgcctctcgctccg	Protospacer
*******************************

3. spacer 1.1|55186|31|NC_000958|CRISPRCasFinder matches to NZ_CP050122 (Deinococcus radiodurans strain BND-54 plasmid pMP1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgcagcacgtctcttttgcctctcgctccg	CRISPR spacer
ccgcagcacgtctcttttgcctctcgctccg	Protospacer
*******************************

4. spacer 1.1|55186|31|NC_000958|CRISPRCasFinder matches to NZ_CP031502 (Deinococcus radiodurans strain R1 dM1 plasmid pMP1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgcagcacgtctcttttgcctctcgctccg	CRISPR spacer
ccgcagcacgtctcttttgcctctcgctccg	Protospacer
*******************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6494 : 68919

Planktothrix_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010884020.1\|6494_7478_+\|transposase	IS4-like element ISDra1 family transposase	NA	NA	NA	NA
WP_027480391.1\|8085_8949_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_081799310.1\|8957_9569_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_027480393.1\|9564_10884_+	cobyrinate a,c-diamide synthase	NA	NA	NA	NA
WP_034351275.1\|10880_11777_+	cobalamin biosynthesis protein CobD	NA	NA	NA	NA
WP_010883990.1\|11769_12777_+	histidinol-phosphate aminotransferase family protein	NA	NA	NA	NA
WP_027480394.1\|12784_14209_+	cobyric acid synthase	NA	NA	NA	NA
WP_027480395.1\|14497_14878_-	PIN domain-containing protein	NA	NA	NA	NA
WP_081816091.1\|14878_15139_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_034351278.1\|15500_16376_+	hemin ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010883993.1\|16372_17437_+	iron ABC transporter permease	NA	NA	NA	NA
WP_165439382.1\|17460_18219_+	heme ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.1e-12	29.9
WP_010884024.1\|18226_18967_+	siderophore-interacting protein	NA	NA	NA	NA
WP_063653101.1\|19120_20305_+\|transposase	IS4-like element ISDra7 family transposase	NA	NA	NA	NA
WP_149358004.1\|20380_21082_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.2e-35	39.6
WP_149358003.1\|21042_21387_-\|transposase	transposase	NA	NA	NA	NA
WP_010884015.1\|21675_22659_-\|transposase	IS4-like element ISDra1 family transposase	NA	NA	NA	NA
WP_010884041.1\|23270_23822_-	hypothetical protein	NA	NA	NA	NA
WP_010884042.1\|23993_25103_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_051618919.1\|25218_26091_+	STAS domain-containing protein	NA	NA	NA	NA
WP_010883996.1\|26096_26522_+	STAS domain-containing protein	NA	NA	NA	NA
WP_162150137.1\|26535_26916_+	anti-sigma regulatory factor	NA	NA	NA	NA
WP_010883998.1\|27009_28065_+	anti-sigma regulatory factor	NA	NA	NA	NA
WP_010883999.1\|28061_29795_+	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	1.0e-26	24.5
WP_162177803.1\|29787_31023_+	response regulator	A0A1V0SGX0	Hokovirus	3.4e-16	30.0
WP_010884016.1\|31160_32072_-	ParB/RepB/Spo0J family partition protein	S5WII0	Leptospira_phage	2.8e-07	32.1
WP_034351178.1\|32068_33019_-	type II toxin-antitoxin system prevent-host-death family antitoxin	A0A240F4U1	Ochrobactrum_phage	1.1e-11	32.5
WP_010884075.1\|33419_33740_-	hypothetical protein	NA	NA	NA	NA
WP_162177804.1\|34744_36379_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_010884003.1\|36400_37060_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	7.9e-12	31.5
WP_010884043.1\|37219_38176_-	hypothetical protein	NA	NA	NA	NA
WP_010884044.1\|39588_41664_+	DUF11 domain-containing protein	NA	NA	NA	NA
WP_164928030.1\|41816_42122_+	hypothetical protein	NA	NA	NA	NA
WP_164928031.1\|42169_44539_+	DUF11 domain-containing protein	NA	NA	NA	NA
WP_010884062.1\|44539_44977_+	hypothetical protein	NA	NA	NA	NA
WP_164928032.1\|44900_47798_+	hypothetical protein	NA	NA	NA	NA
WP_010884004.1\|47826_49563_-	SgrR family transcriptional regulator	NA	NA	NA	NA
WP_063653100.1\|49617_50874_+	MFS transporter	NA	NA	NA	NA
WP_155896399.1\|50946_51114_-	hypothetical protein	NA	NA	NA	NA
WP_010884006.1\|51332_52883_+	sensor domain-containing diguanylate cyclase	A0A2D0W9B6	Bordetella_phage	4.6e-10	48.7
WP_027480382.1\|53286_55053_+	alkaline phosphatase	NA	NA	NA	NA
WP_010884048.1\|55472_55931_+	hypothetical protein	NA	NA	NA	NA
WP_010884017.1\|55927_56575_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-23	38.3
WP_010884049.1\|56571_57780_+	ABC transporter permease	NA	NA	NA	NA
WP_162177805.1\|58133_60134_+	hypothetical protein	NA	NA	NA	NA
WP_010884007.1\|60424_60826_-	PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM	NA	NA	NA	NA
WP_081816081.1\|60822_61461_-	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
WP_027480379.1\|61415_62414_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_010884051.1\|62873_63404_+	hypothetical protein	NA	NA	NA	NA
WP_149358002.1\|64247_64763_+\|transposase	transposase	NA	NA	NA	NA
WP_010884019.1\|65290_66274_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_063653099.1\|66278_67454_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_063653036.1\|67686_68919_+\|transposase	transposase	A0A218MNH3	uncultured_virus	1.7e-36	28.1

DBSCAN-SWA_2

110037 : 154050

Bacillus_phage(33.33%)

integrase,transposase

attL 122244:122269|attR 156528:156553

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010883957.1\|110037_111393_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	4.0e-10	23.0
WP_010883958.1\|111389_112049_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.8e-25	33.0
WP_010883959.1\|112248_112974_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	1.4e-06	24.6
WP_162150140.1\|113156_114188_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.2e-14	34.0
WP_010884030.1\|114491_115520_+	RNA ligase (ATP)	D4N471	Pseudomonas_phage	9.4e-12	24.3
WP_165439381.1\|115842_116235_+	hypothetical protein	NA	NA	NA	NA
WP_010884031.1\|116274_116613_-	hypothetical protein	NA	NA	NA	NA
WP_034351235.1\|116782_117571_+	alpha/beta fold hydrolase	A0A218MNI3	uncultured_virus	4.9e-61	40.8
WP_010884033.1\|117654_118896_-	AAA family ATPase	D5GVP0	Campylobacter_virus	7.2e-06	31.4
WP_010884064.1\|118871_119729_-	TIGR02452 family protein	G3MBH6	Bacillus_virus	7.6e-39	38.4
WP_010884034.1\|119725_120358_-	RNA ligase family protein	A0A248SJ81	Salicola_phage	5.5e-55	49.0
WP_081816080.1\|120550_121432_-	hypothetical protein	A0A1V0SK86	Klosneuvirus	6.6e-30	27.6
WP_010884020.1\|121855_122839_-\|transposase	IS4-like element ISDra1 family transposase	NA	NA	NA	NA
122244:122269	attL	NA	NA	NA	NA
WP_063653103.1\|123064_124240_+\|transposase	IS4-like element ISDra7 family transposase	NA	NA	NA	NA
WP_010883962.1\|124397_125432_+\|integrase	tyrosine-type recombinase/integrase	W8EHC2	Mycobacterium_phage	1.3e-08	33.3
WP_162177816.1\|125865_126348_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_010883964.1\|126504_126930_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	S5MA49	Bacillus_phage	5.1e-12	33.3
WP_027480402.1\|126914_129002_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	R4JDX9	Bacillus_phage	1.1e-189	47.8
WP_027480401.1\|129058_130054_+	ribonucleotide-diphosphate reductase subunit beta	A0A142F1R6	Bacillus_phage	7.3e-86	50.8
WP_010884021.1\|130046_130310_+	thioredoxin	NA	NA	NA	NA
WP_162177815.1\|130368_132678_+	glycerophosphodiester phosphodiesterase	A0A2P1N091	Streptomyces_phage	3.2e-07	36.0
WP_027480400.1\|132891_133458_+	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_076611356.1\|134956_136141_+\|transposase	IS4-like element ISDra7 family transposase	NA	NA	NA	NA
WP_010884035.1\|136548_137262_-	DUF2259 domain-containing protein	NA	NA	NA	NA
WP_010884022.1\|137626_138610_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_027480426.1\|138625_139579_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_010883969.1\|139862_141131_-	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	7.3e-38	40.6
WP_010883970.1\|142426_143236_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-16	31.2
WP_162177814.1\|143232_144201_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_010883972.1\|144260_145235_-	iron ABC transporter permease	NA	NA	NA	NA
WP_162177813.1\|145231_146143_-	SIP domain-containing protein	NA	NA	NA	NA
WP_010883974.1\|146151_147126_-	iron-siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010883975.1\|147468_147990_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010883976.1\|148519_149833_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_010883977.1\|149829_151131_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_027480398.1\|151574_152354_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	3.9e-42	45.9
WP_063653090.1\|152865_154050_-\|transposase	IS4-like element ISDra7 family transposase	NA	NA	NA	NA
156528:156553	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_001263

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_000958

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection