CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_003030	Clostridium acetobutylicum ATCC 824, complete sequence	3 crisprs	DinG,cas3,csa3,WYL,DEDDh,RT	0	0	10	0
NC_001988	Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence	0 crisprs	csa3	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_003030_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_003030_1

2033959-2034046

Orphan

Consensus_repeat	Method
TTCTCTGCTTCTGCTTTTGTATTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_003030_1

>merge|NC_003030|1|2033959-2034046|CRISPRCasFinder
TTCTCTGCTTCTGCTTTTGTATTATTGTTAATTGTCTGAGTATTAGTTGCCACAGAACTAGTATTTTCTGCTTCTGCTTTTGTATTAT

>NC_003030|1|1|2033959-2034046|CRISPRCasFinder
TTCTCTGCTTCTGCTTTTGTATTAT	TGTTAATTGTCTGAGTATTAGTTGCCACAGAACTAGTA
TTTTCTGCTTCTGCTTTTGTATTAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_003030.1\|WP_010965178.1\|2020649_2020826_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965190.1\|2036089_2036419_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965197.1\|2040296_2041067_-\|Clp-protease-ClpP	unknown	unknown	gnl\|CDD\|132927
NC_003030.1\|WP_010965182.1\|2023750_2024008_-\|hemolysin-XhlA-family-protein	unknown	unknown	gnl\|CDD\|371241
NC_003030.1\|WP_010965180.1\|2022094_2022658_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197664
NC_003030.1\|WP_010965181.1\|2022677_2023733_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|119385
NC_003030.1\|WP_010965195.1\|2038499_2038817_-\|phage-head-tail-connector-protein	unknown	unknown	gnl\|CDD\|130623
NC_003030.1\|WP_010965185.1\|2028558_2028933_-\|DUF1617-family-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965191.1\|2036472_2037393_-\|Ig-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|273713
NC_003030.1\|WP_010965193.1\|2037757_2038189_-\|HK97-gp10-family-phage-protein	unknown	unknown	gnl\|CDD\|273775
NC_003030.1\|WP_010965192.1\|2037437_2037761_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965184.1\|2024315_2028527_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|273743
NC_003030.1\|WP_010965196.1\|2039104_2040295_-\|phage-major-capsid-protein	unknown	unknown	gnl\|CDD\|273690
NC_003030.1\|WP_010965194.1\|2038189_2038537_-\|phage-head-closure-protein	unknown	unknown	gnl\|CDD\|227901
NC_003030.1\|WP_010965183.1\|2024019_2024286_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965199.1\|2042285_2044076_-\|terminase-large-subunit	unknown	unknown	gnl\|CDD\|226974
NC_003030.1\|WP_010965186.1\|2028919_2029186_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965179.1\|2020840_2021875_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_171779428.1\|2041029_2042244_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|227039
NC_003030.1\|WP_010965187.1\|2029204_2030413_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_003030.1\|WP_010965195.1\|2038499_2038817_-\|phage-head-tail-connector-protein	gnl\|CDD\|130623	TIGR01560, phage-related_hypothetical_protein, uncharacterized phage protein (possible DNA packaging). This model describes a small (~ 100 amino acids) protein found in phage and in putative prophage regions of a number of bacterial genomes. Members have been annotated in some cases as a possible DNA packaging protein, but the source of this annotation was not traced during construction of this model. [Mobile and extrachromosomal element functions, Prophage functions].	1.58792e-33
NC_003030.1\|WP_010965197.1\|2040296_2041067_-\|Clp-protease-ClpP	gnl\|CDD\|132927	cd07016, S14_ClpP_1, Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP, although the proteolytic subunit alone does possess some catalytic activity. Active site consists of the triad Ser, His and Asp; some members have lost all of these active site residues and are therefore inactive, while others may have one or two large insertions. ClpP seems to prefer hydrophobic or non-polar residues at P1 or P1' positions in its substrate. The protease exists as a tetradecamer made up of two heptameric rings stacked back-to-back such that the catalytic triad of each subunit is located at the interface between three monomers, thus making oligomerization essential for function.	5.38978e-79
NC_003030.1\|WP_010965182.1\|2023750_2024008_-\|hemolysin-XhlA-family-protein	gnl\|CDD\|371241	pfam10779, XhlA, Haemolysin XhlA. XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes. This family has had DUF1267, pfam06895, merged into it.	3.37745e-16
NC_003030.1\|WP_010965180.1\|2022094_2022658_-\|hypothetical-protein	gnl\|CDD\|197664	smart00338, BRLZ, basic region leucin zipper.	0.00537995
NC_003030.1\|WP_010965181.1\|2022677_2023733_-\|peptidoglycan-binding-protein	gnl\|CDD\|119385	cd06525, GH25_Lyc-like, Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.	1.89538e-81
NC_003030.1\|WP_010965196.1\|2039104_2040295_-\|phage-major-capsid-protein	gnl\|CDD\|273690	TIGR01554, prophage_Lp3_protein_18, phage major capsid protein, HK97 family. This model family represents the major capsid protein component of the heads (capsids) of bacteriophage HK97, phi-105, P27, and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease. [Mobile and extrachromosomal element functions, Prophage functions].	2.3884e-22
NC_003030.1\|WP_010965199.1\|2042285_2044076_-\|terminase-large-subunit	gnl\|CDD\|226974	COG4626, COG4626, Phage terminase-like protein, large subunit [General function prediction only].	0
NC_003030.1\|WP_010965191.1\|2036472_2037393_-\|Ig-like-domain-containing-protein	gnl\|CDD\|273713	TIGR01603, Uncharacterized_phage_related_protein, phage major tail protein, phi13 family. This model describes a set of proteins that share low levels of sequence similarity but similar lengths and similar patterns of charged, hydrophobic, and Gly/Pro residues. All members (except one attributed to mouse embryo cDNA) belong to phage of Gram-positive bacteria. Several are identified as phage major tail proteins. Some members of this family have additional C-terminal regions of about 100 residues not included in this model. [Mobile and extrachromosomal element functions, Prophage functions].	2.93556e-69
NC_003030.1\|WP_010965193.1\|2037757_2038189_-\|HK97-gp10-family-phage-protein	gnl\|CDD\|273775	TIGR01725, hypothetical_protein, phage protein, HK97 gp10 family. This model represents an uncharacterized, highly divergent bacteriophage family. The family includes gp10 from HK022 and HK97. It appears related to TIGR01635, a phage morphogenesis family believed to be involved in tail completion. [Mobile and extrachromosomal element functions, Prophage functions].	1.7844e-24
NC_003030.1\|WP_010965184.1\|2024315_2028527_-\|phage-tail-protein	gnl\|CDD\|273743	TIGR01665, structural_protein, phage minor structural protein, N-terminal region. This model represents the conserved N-terminal region, typically from about residue 25 to about residue 350, of a family of uncharacterized phage proteins 500 to 1700 residues in length. [Mobile and extrachromosomal element functions, Prophage functions].	8.13624e-79
NC_003030.1\|WP_010965194.1\|2038189_2038537_-\|phage-head-closure-protein	gnl\|CDD\|227901	COG5614, COG5614, Bacteriophage head-tail adaptor [General function prediction only].	1.06189e-50
NC_003030.1\|WP_171779428.1\|2041029_2042244_-\|phage-portal-protein	gnl\|CDD\|227039	COG4695, COG4695, Phage-related protein [Function unknown].	3.79146e-146

>NC_003030.1|WP_010965187.1|2029204_2030413_-|hypothetical-protein
MKINGIDIQNYGARLLKWDPQPATIVNSEEWLRNSISPSLYNQQLQYKKTTAEIQVIGEDRTDAYIKCSKLIYDLKKCTLEIEDIGLFYDCILESTSIAKGIVLNKLTLTCTFNTDYAYKTPINQDFKGSTTVNVEGTEKTPAIITITEPVDTSYVYIDGITDTTIRLLYLKKDIPVTIDGEKKLIYEPDLDHWVTEDTGENKWIFKRWNIALANDPELFYPKIIPQKSNINKSISPYNQSLLTDGATLINDNVTNYYASIRTALYVSNSKSITFKFEHDDGVNLYLNGDSVYSNDTAEAPETGNAGYPSVTLNLSSGWNIIEFLYINHQGSGGVWGITPTIGSLVEKVNCFYSRDLDYLPTANKFAEADFWEFPKLAPGTNIINLNDNNASATISYKPRFN
>NC_003030.1|WP_010965186.1|2028919_2029186_-|hypothetical-protein
MLNLTRSVNLNGYSNVETTDSNNNKITQQVVYFSANITENGNPSVTVSIINKDLYSANKAAVQSDIASFYTTVYTELDAVGGNTNGTK
>NC_003030.1|WP_010965185.1|2028558_2028933_-|DUF1617-family-protein
MELSNRKIIENLSALRTVSNKQLPIKASYAIAKNINKIEEELKIFRKEKEKLINKYGQKNNNGKLAIDDKGKIELADAEGYNKDLNELLDIKTDIDIHKFKLDIINNVQFSPLEIQAIECMIEE
>NC_003030.1|WP_010965184.1|2024315_2028527_-|phage-tail-protein
MLLLLDTQKNKIGNIADYKDLKLEREINKLDILSFSISRNDPAYEIIQEEYYIRNNLENEYVIKQINISEDDYKEVVCEVNVEELKGTLIDNINQTQGNCEATANLAMVNTTWHVGYCDVIRKRNIIKKQCSVYDVLQEIQSMYHCEIAFNAINKEVLIYQSIGSDKGTYFSDELNLRQLNLQSDTNDYVTQIIPIGANNLTIESANNGDNYVSNYQYTKKILKAYWVDNRYTIAQDLKDDATERLSELSKPKKSYSVSIADLANLSEDYKILDYGLGDSITLLSKNKRIKDNQRIKKLEIYPEEPEKNTAEVSNTLENVEDLIKRFDNTSDTVEQITNSDNTVTSNAISSVDWTKVTNVSITSAQIGNAQVGTLQVADASITNAKIDRESVNKLVVTNADIQDATIEGAKIKEATITSANIQDEAVNESKINHAFIDKLDSTYATIKNLDVASANVDNLKVSVGTIMDLTTNTLKSQIITADNIKTNTITAGSGIIAQGAIGSAEISELDASLIRSGKLDTSLITVVSGDNHLNITGSKIQFFDTDSSNKLFERICIGDVNGDKSDYGMVLRAKNGTTTLFDVDGITKEGFTDGYGKLDNNSLDPKKIDIEKVVTSINGAVTKIDGSSITVDNQTLSARFSSITENLDNMQIGGTNVLRNTAFNGLDHWGVTGVQGCATVSTDNKYNQNNSVCINITGATSNVYGGISQNLSNQVIPGETYVLSFYLMCPDLSKFTSDLRIYFPQYDTSNNLLDTWAQVGDIVSSQLTQGVWKKYVYPIKFNSAFKTANLNIDFSMNGLVYLNSLKLEKGNKTTDWSPSPLDIESSISSVSSQVTETANAIGFNLNTQTWDTTDNYSSFKDIQTFIQANHGKITSSVSETDIEASIGNINIGINNLIHNGNFLKGAIPGSTTAPNYWGFWGNPEIYGEQGQGPYILTGTLYIGHQIYNSGISQELTDILEPNTTYTIVFNSSKESVNGVYNQMEYYDSNKNCIGTTKFDYDYSKPNTPQSFTFTTPASFVAVDFAHGGTAQVWRSGYLTSIGNVVLVEGTKAPSSFVYNLDDIQKQIDQNTSTISQQANLISTKVDVNGVISTIQQNPTSVQYAFNQINSAMIQIDGAGLHIGNGGIEIKNKSGNIVFNTDSNGDLNMRGTLSQYDSNGQISTDIRNNAFNCYDWKSSGNFVGSLTASESDDGHLGVAVYSDNGDELYLGNFVGSAGRAVSLITISQLKQYPINFNGNMDLHNYNINNPGNLVQTQSDGFINYIRMHNGSNGAYMEVANVDHLYGINVWNSDISFKYAIADSTENALDIINRFKHRQFHWKEDGRHQELGYVSQELYAINPALVLSVPQKNGTVIMQPRDDMIIPYLSKSIQEEDAKVEQLKSKIISLENRILMLENQNKTA
>NC_003030.1|WP_010965183.1|2024019_2024286_-|hypothetical-protein
MDIVESQNMSATITVSDNGKDVIVAYLNCSNLEPTAMIFNGITVNVTNKQLLTQANAVNTEGETPAQQYLKFETAVKTKAKSMGYVIF
>NC_003030.1|WP_010965182.1|2023750_2024008_-|hemolysin-XhlA-family-protein
MSENYDAKLCEERHKVIDEKINLHNVRLNDHSDRLKKLERRSSAVDEKVENLCEQLKSLVNTLKWGFGILVTITLFVLGYLIKIK
>NC_003030.1|WP_010965181.1|2022677_2023733_-|peptidoglycan-binding-protein
MKNRIETLLVAFTFVSATFFIPLNVHATIYKGIDIYEYDNIQDWQQVKDSGVSVVIQKATQGLYHNDSLLNYRYPKITNAGLKIGYYHFANNSANPVAEAQHFLSRIQGLKMDTCLWLDIENQPNWTKQQAIDYTNKFISYVQSQGYKIGIYTGLSFYYEYLQGHVPNVPLWLASYGKQPQQYPNLVSWQYSESGSLSGVIGDVDLDYFNDSIFTGQAPQVTTAVQETNPVKIIQQQLNTVLYSSNLTIDGIQGNATTQQIRVFQQVCGLKIDGIWGQQCVNAIQQIYGKDLCGRPYIHRIPTRVIQYNMGISFDGIYGKGTASRVQAWQSGHGLNTDGLFGNKSWNKLFK
>NC_003030.1|WP_010965180.1|2022094_2022658_-|hypothetical-protein
MEKYNFIIAMVIILGVCGAGYVFAYLKKKGFKTGTVLDGAQTVAGDVGTAIRAAESLAPNNRTLNLLDTIDKIVYKSVMGTKQLYISSQLPADQRKDNAKKLISAGLKIANISETPSLDIFIDAVLEQTIYDSKTDTEKKVQEQNTLQTQITQLTTEKAQLQANNTELANKNVELTNKLNTVLSTIK
>NC_003030.1|WP_010965179.1|2020840_2021875_-|hypothetical-protein
MIFKDVVNYYNELAEKSKYLLEFKNQILQVKAKYIEAYTYILDGTITSGVNASNVESAKNQVTNMVACIQVEARKVNLMEIGKVINEIYQVKKDKASKLLNSIENCSNWIYNFSNMPSIAVQQIESFIKSIDTAVKEIDNIFYKNDFLNNINSAIESNECVYEESATLAIRMYRTQIELGEMANYMIIINSIYERVCAIFNVSASEYKLMPIKIESGSWYEKIFGNSKVMAFIEDWLNRAVGFIYRNYTNEGKLKGQSNKINALKENLKLTELCEKHGINTEEAKKVLKQNLDALCLDTYKLTTRNNKISIGENVYDLGKEISQAVLESASDKYIDTPRLEKYN
>NC_003030.1|WP_010965178.1|2020649_2020826_-|hypothetical-protein
MNKIIKVIKYTIVKNFVRVLISTIGFIKKISDDTTKKRIDVMVNNALINNLVSLNKIH
>NC_003030.1|WP_010965190.1|2036089_2036419_-|hypothetical-protein
MSEIKDLRQEGVKTNIGGKEVNLYFDLNDLCDLEEEYGDATKALEAIRSIKGARHCLWIAMRKANEEITEKEVGALIPSSDFTPVTSNLAKALWGSLPEQKNEGTKENK
>NC_003030.1|WP_010965191.1|2036472_2037393_-|Ig-like-domain-containing-protein
MPNMGIEKLYVSQQLTDSAAGMTFTKPQYYKYVQELSLKPKVNSASAYAENRKVDQDTQFDSCDVSINLFQMTSSQRAFMLGQSLAGGGGAIGALNDKAPWITLLYKAPIKVDDTIYYRYGVIYKTQFQPPDDDYKTTEGKPDFSQVPKISGSAQPTEWSFKDGKLEKHPWEWHVDTCDPNCPENIDDTWFNSVSIPSLVTYGSLSLSASSPKDGATGISLDTKPSLTFNNPIMNATSILLYNVSDGATVNTTTSSDSSGKIITITPSTNLVANKNYVLVVQDVTDLYGQTLDTQLIRFTTATAAS
>NC_003030.1|WP_010965192.1|2037437_2037761_-|hypothetical-protein
MTALSQILKTTGVPVSHLSYSGKETTYITYSYYNVRGGAYAENREIATIYHLQVDIWTKDTYEDLADQVRTLMIAAGYYRTDEKEYYEPETQIKHKIFDFEYAESSQ
>NC_003030.1|WP_010965193.1|2037757_2038189_-|HK97-gp10-family-phage-protein
MGVEASVTDIGALIDKAEQMGLKVSSMENGALRAGAQPILEAAKQNLETPSLHHLGSKQFEKDSIVTKKLLESITIGNPKKDRLRGGRYIKVFTSRPNAHLVEFGHAGPAPAPPHPFMRTAYQNNKEEVKRTIIEVLREGIKQ
>NC_003030.1|WP_010965194.1|2038189_2038537_-|phage-head-closure-protein
MHYSNQAKTAQLNKRITFQKMVVTTDKYDNEIKKLQDYKTVWAAAKNLHGQEFYAAGEEQSKRTAIFTIRYTNDISNDMRIKFGDRSFNISFVDDIKYQGEFMEVTAIEIVQEGD
>NC_003030.1|WP_010965195.1|2038499_2038817_-|phage-head-tail-connector-protein
MVTLDQLKLSLRIDTSDDDTLLTLFMQTASDYIKGSIGNGVTGFYDSNPRFDTALILLTDHYYKTRSATDETDLKKVPFGVTTLILQLKGDYLYALQQSSQNSST
>NC_003030.1|WP_010965196.1|2039104_2040295_-|phage-major-capsid-protein
MAKKTLFEMKQDLVTIGAQLEKVENEIADKAIDPKVTTDELNQLTQTKADLKTRFDLLKAQHDSMEAEQKEALAAKQQANSNILDGVDDEKTKTIKAKASFIKAVMTKNSIPDDVRNALSMNNIKAVLGADSTLQNGDKLLPITISTELLTEPMATNPLRGNSTFTQITNLEIPKLSFTLSDDGFLPDDSQTAKELEADGDVVTFGRNKFKVFCDITETVLNGTETNLVATVQAGLQSGLAAKEKKVAFESAKPTDMSFYQKDDKGNYLIKTVSGNTLFNAIIAALADLEDGYSENAKVVMKKSDYFNMLKELANNNTSLFLAPPEQILGAPVIFCDLATIPVVGDLRYSHYNYDLKMLYDQDKNVKTGIESFVLTAWIDHKIKLKSAFRLAVVTP
>NC_003030.1|WP_010965197.1|2040296_2041067_-|Clp-protease-ClpP
MATQPKQQNQQNKFWQMKASANDDKQADVFIYGEITSYQWDDTDTTAASFKKDLDALGNLNTINLHLNSPGGSVFEGVTICNMLKQNSATVNVYVDALAASIASVIAMAGDTIFMPKNAMLMVHNPSSVVWGNSSDMRKTADDLDKIGLSMQQSYLAKAGDKLDQSTLQQLMDNETWLSADECFSYGLCDVVQEENNATACTSKELFNNYRNVPKNLLNETNPMAILQDVDMEERKKIAEKARKSAEYTRTILGGI
>NC_003030.1|WP_171779428.1|2041029_2042244_-|phage-portal-protein
MFKSNRIRAETISVPISQRFTNWVGRTFWGVDNSSLSNNELIFSIISRLSNTFASLPIKIYQQYQIINNDISDLVSNSPNPNMTSFEFHQKMETDRNEYGNAYALIERDIRLNPVSLIPVPAYYVTPIINSADGSLWYEVNINGKTTYVYNTEIIHVKHITGSSRLAGISPIKVLTNALKYDKAVQEFSLREMDKIDSFKVKYDANMEEPKKQAIIDNFKAFIADNGGALFEENGTEITELQRGYNAADMLNSEKITRTKMANVFNVPVAFVNDTDGQSYSSNEQVMIQYVQMRLTPDVRQYEQEYNRKLLNPVQRAQGLYFKFSINALLRGDTASRTAYYQSAVRTGYMKPDEVRVLEDLPPEGGSADKLWISGDLYPIDMDPTQRKGGNDGGDTTKTTEPAK
>NC_003030.1|WP_010965199.1|2042285_2044076_-|terminase-large-subunit
MKMMKMNSKILDMSYTELTNYWGNYKNEQKEWGGILEEPYPELLTTWYAERLVDRTIPASKENILAAKRHLKDLERQGTDDFPWVFDEEKGHRPIRFIEQKCKPSKGDFDQLVLQPWQHFIIGSLYGWVHKDTGIRRFREGLIFVGRKNGKTTLISGLSNYSVGFDYENGARVYVLANAEQQAHELFDEAKAMVKTSPFLKKRYKPLRSIIRYEDKFSQIEARASDSKRLDGLNTHLGIFDEIHEFQDFKLINVIKKSRGARKQPLIIYITTAGYVLDGPLMQFYDDGKECLENIDDNIDERTFYYMAKLDSIEEAEEPRNWIKANPNIGLMDFVGLVSDWKKDRKSPQERADWITKQFNIFADVTELSLVDIETINKNSKTIDIDTLKGLECTGGYDLSETEDFTSAVLEFPLPTSEVFVLCHSWISKARYNRDKNKQRLDEWIKAGDLTVIPGMYVKDIYVQEWFVEQRKKYKITKIMYDPAKALRLNEALKDLGFKTEIVRQGFITLGGPLQDFKQMLLDGKVIYNNSKIYRWYLKNVKLVEDRNKNWIPTKQSKNRKIDGFAATLDAHVDIVTKLARIKKGPASVGFASLRR

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Crispr_ID: NC_003030_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_003030_2

2080371-2080510

Orphan

Consensus_repeat	Method
TTATGGTTCAAGATTTATAATGGGCTCTTAGCCCAAACCCCAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_003030_2

>merge|NC_003030|2|2080371-2080510|CRISPRCasFinder
TTATGGTTCAAGATTTATAATGGGCTCTTAGCCCAAACCCCAGGGCACTATTCTGTTTCTTTTCTATGGTCAGCTCTTTTTTGACAGACTGCTTTTTTATGGTTCAAGATTTATAATGGGCTCTTAGCCCAAACCCCAGG

>NC_003030|2|2|2080371-2080510|CRISPRCasFinder
TTATGGTTCAAGATTTATAATGGGCTCTTAGCCCAAACCCCAGG	GCACTATTCTGTTTCTTTTCTATGGTCAGCTCTTTTTTGACAGACTGCTTTT
TTATGGTTCAAGATTTATAATGGGCTCTTAGCCCAAACCCCAGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_003030.1\|WP_010965262.1\|2075808_2076393_-\|spore-protease-YyaC	unknown	unknown	gnl\|CDD\|115518
NC_003030.1\|WP_010965263.1\|2076561_2077536_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|277329
NC_003030.1\|WP_010965274.1\|2088180_2088825_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237863
NC_003030.1\|WP_010965270.1\|2084922_2086698_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|226036
NC_003030.1\|WP_010965275.1\|2089024_2089678_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378023
NC_003030.1\|WP_010965264.1\|2077615_2078344_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NC_003030.1\|WP_010965265.1\|2078635_2080213_-\|5'-nucleotidase	unknown	unknown	gnl\|CDD\|277355
NC_003030.1\|WP_010965258.1\|2072068_2072245_-\|DUF1737-domain-containing-protein	unknown	unknown	gnl\|CDD\|227802
NC_003030.1\|WP_013913686.1\|2071876_2072041_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965269.1\|2084046_2084859_+\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
NC_003030.1\|WP_010965259.1\|2072360_2073956_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NC_003030.1\|WP_010965267.1\|2081512_2081989_-\|transcription-elongation-factor-GreA	unknown	unknown	gnl\|CDD\|273638
NC_003030.1\|WP_010965261.1\|2075273_2075807_-\|DUF1256-domain-containing-protein	unknown	unknown	gnl\|CDD\|115518
NC_003030.1\|WP_010965276.1\|2089693_2090263_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965273.1\|2087512_2088112_-\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|366666
NC_003030.1\|WP_010965271.1\|2086718_2086940_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_185636555.1\|2073915_2074254_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224127
NC_003030.1\|WP_010965260.1\|2074349_2075174_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381383
NC_003030.1\|WP_010965268.1\|2082171_2083506_-\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
NC_003030.1\|WP_010965272.1\|2086955_2087453_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_003030.1\|WP_010965262.1\|2075808_2076393_-\|spore-protease-YyaC	gnl\|CDD\|115518	pfam06866, DUF1256, Protein of unknown function (DUF1256). This family consists of several uncharacterized bacterial proteins which seem to be specific to the orders Clostridia and Bacillales. Family members are typically around 180 residues in length. The function of this family is unknown. These proteins are related to peptidase family M63 and so may be peptidases.	6.3476e-71
NC_003030.1\|WP_010965263.1\|2076561_2077536_-\|metallophosphoesterase-family-protein	gnl\|CDD\|277329	cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	4.66576e-46
NC_003030.1\|WP_010965274.1\|2088180_2088825_-\|hypothetical-protein	gnl\|CDD\|237863	PRK14949, PRK14949, DNA polymerase III subunits gamma and tau; Provisional.	0.0010956
NC_003030.1\|WP_010965270.1\|2084922_2086698_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|226036	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion].	2.52823e-173
NC_003030.1\|WP_010965275.1\|2089024_2089678_-\|hypothetical-protein	gnl\|CDD\|378023	pfam08666, SAF, SAF domain. This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.	2.15828e-07
NC_003030.1\|WP_010965264.1\|2077615_2078344_-\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	1.4356e-78
NC_003030.1\|WP_010965265.1\|2078635_2080213_-\|5'-nucleotidase	gnl\|CDD\|277355	cd07410, MPP_CpdB_N, Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.97526e-129
NC_003030.1\|WP_010965258.1\|2072068_2072245_-\|DUF1737-domain-containing-protein	gnl\|CDD\|227802	COG5515, COG5515, Uncharacterized conserved small protein [Function unknown].	8.28469e-29
NC_003030.1\|WP_010965269.1\|2084046_2084859_+\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	9.6659e-08
NC_003030.1\|WP_010965259.1\|2072360_2073956_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	3.05834e-47
NC_003030.1\|WP_010965267.1\|2081512_2081989_-\|transcription-elongation-factor-GreA	gnl\|CDD\|273638	TIGR01462, Transcription_elongation_factor_GreA, transcription elongation factor GreA. The GreA and GreB transcription elongation factors enable to continuation of RNA transcription past template-encoded arresting sites. Among the Proteobacteria, distinct clades of GreA and GreB are found. GreA differs functionally in that it releases smaller oligonucleotides. Because members of the family outside the Proteobacteria resemble GreA more closely than GreB, the GreB clade (TIGR01461) forms a plausible outgroup and the remainder of the GreA/B family, included in this model, is designated GreA. In the Chlamydias and some spirochetes, the region described by this model is found as the C-terminal region of a much larger protein. [Transcription, Transcription factors].	3.87647e-49
NC_003030.1\|WP_010965261.1\|2075273_2075807_-\|DUF1256-domain-containing-protein	gnl\|CDD\|115518	pfam06866, DUF1256, Protein of unknown function (DUF1256). This family consists of several uncharacterized bacterial proteins which seem to be specific to the orders Clostridia and Bacillales. Family members are typically around 180 residues in length. The function of this family is unknown. These proteins are related to peptidase family M63 and so may be peptidases.	4.08753e-59
NC_003030.1\|WP_010965273.1\|2087512_2088112_-\|prepilin-peptidase	gnl\|CDD\|366666	pfam01478, Peptidase_A24, Type IV leader peptidase family. Peptidase A24, or the prepilin peptidase as it is also known, processes the N-terminus of the prepilins. The processing is essential for the correct formation of the pseudopili of type IV bacterial protein secretion. The enzyme is found across eubacteria and archaea.	6.95225e-09
NC_003030.1\|WP_185636555.1\|2073915_2074254_+\|hypothetical-protein	gnl\|CDD\|224127	COG1206, Gid, NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis].	4.27982e-05
NC_003030.1\|WP_010965260.1\|2074349_2075174_-\|aldo/keto-reductase	gnl\|CDD\|381383	cd19157, AKR_AKR5G1-3, AKR5G family of aldo-keto reductase (AKR). Bacillus subtilis glyoxal reductase (GR), uncharacterized oxidoreductase YtbE, and Bacillus aryabhattai aldo-keto reductase are founding members of aldo-keto reductase family 5 member G1-3 (AKR5G1-3), respectively. GR (YvgN, EC 1.1.1.283), also called methylglyoxal reductase, reduces glyoxal and methylglyoxal (2-oxopropanal). It is not involved in vitamin B6 biosynthesis.	0
NC_003030.1\|WP_010965268.1\|2082171_2083506_-\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	0.000324441

>NC_003030.1|WP_010965265.1|2078635_2080213_-|5'-nucleotidase
MGNELEHIVILETSDVHGNIFPVNYADNSEEQFGLVKLSTIVKNERKRNSKLILIDNGDTFQGTPITYYYAKIARGFSNPVIDILNYMKYDAAVIGNHEFNYGMEILNDSIKQSKFPWLSCNIIDTKTKETAFGVPYIIKEFRGDLRIAILGVTTKYIPNWENQDIIKDLKFLDVIEETKKWVRILKNDKKVDIVVVSYHGGFEKNIDTGEETESQTGENQAYELCNEVDGIDVLLTGHQHREIYGMKINGVTIIQPGSSAKNIGKVDIIAEKTLLGWRIVESKSSLISVSNISSDYKAGKIAEKYEIATQAWLDTPIGRIKGDMTIKNPIEARLKDNALIEFINKVQMINGGTDISATSLFSNSKGFPKKVTMRDIVSNYVYPNTLKVMKVKGKDIKDALELSAAYFDICNGRIKEASNVNSLKLRHYNYDMWEGIEYEINVSKKIGERVTKLNYKGMPVNMEQDYNIALNNYRAAGGGNYYMFKDKEIVRDIPIDISELIANYFLKNKEVVAEVNKNWKVIHD
>NC_003030.1|WP_010965264.1|2077615_2078344_-|alpha/beta-hydrolase
MQGRVYNGVLDKREYFVYLPPTYGKGDNHYSVIYMQDGDIVIKILNELMDLIENKSKKDVYDESIIVGVKPIVRNDDYTPWEAEAISKGSSEFGGRGDIYLNFLIKKLKPYIDNKYRTKKEKNFLLGYSLGGLISIFAIYKTECFSKVVSISGSLWYKGLIDFMEKSNPVNLDIKVMLMIGNKEGRSRNIYLKNSIISTEKALQILKKDLTPSNVVYSIEEGGHVDNILSRYYKTILWLNEK
>NC_003030.1|WP_010965263.1|2076561_2077536_-|metallophosphoesterase-family-protein
MKVKKRVIKTNVVLFFEFIFLLNMISGADFLQNKKLKFDNCGKFKIVQFADLHQNDCINLKTVHFMEKVMDYEKPDFVILTGDNIDGRYCMDITYEKAIESVVRPIEERRIPWAAVLGNHDTESLQVERKNMIKNYMKYKYNMNKITDDGIQFNLLVMDSENKNPIFNMYMLDSGSYSKKGGYGCIEPYEVKWYKKTVTDLKKKYGHIVPAFMFFHIPIIQYNEAWENEKLCGEKREKICHQSTDNGLFKEMQKEKDVKAIFVGHDHTNNFIGRNKGIIMGYGRCTGYDTYDASNYERGARVIYLDEDNINKFKTWERLDKDFK
>NC_003030.1|WP_010965262.1|2075808_2076393_-|spore-protease-YyaC
MEHFDDKSQLKRNGFYFSYNVDKENIEHWISAILFQVLKDKEDIVILSLGVDTLVGDSLGPLVGSILKRNGIPNVYGTLDRTVNASNIIKILDEIHERFKNPYILVVDAAVTAENNINDIVLRNGGFTPGFGVYRQLPTVGDFSLVGVVNKEDEREHNLIELLKKCRFDEVLKLARIISKILVLTFARMNKGDK
>NC_003030.1|WP_010965261.1|2075273_2075807_-|DUF1256-domain-containing-protein
MYLEKYYYEKNIQEEFFKFLYSMTGKKEEIVVICIGDPVFEGNILAPLVGTLLHERNIPNVYGTLKEPVYEINIKEIYNKILKKYDNPYIILVASSFPVDFHDEREVIVLKNDPYEIQTASGSLKLGNASFIVVFDLEDSYCKVNFIEKLGIRKIYKYSEAIFKTLYYILHNKNYVK
>NC_003030.1|WP_010965260.1|2074349_2075174_-|aldo/keto-reductase
MLDINSFTVLNNGVKMPWLGFGTYKIEYEESSVDYIKTALKVGYRHLDTAAVYGNEPIVGKAVKESGIPRNEIFITSKVWNNKHGYDKTLKAFEDTLKRLDTDYLDLYLIHWPKTLNKETWKALEKLYKDGRVRAIGVSNFKVHHLEEILEDCEIVPMVNQVEYHPQFPQTEVHEFCKKNKIQLESWGPLMQGKIFDIPLMKELSLKYGKTISQIALRWDLQMGVVTIPKSINENRIKENCDLYDFEISKEDMKKIESLNTGVRIGHDPDTITF
>NC_003030.1|WP_185636555.1|2073915_2074254_+|hypothetical-protein
MTSTLLMKLLFCIKRCQAEAICTGSLAGHNAVRKFLEMSPLILPQQTSLGDIISYANYKLMTKEGRRNRYTFAGAEYFKRMKEIGLYSTDTDEIKDKISSLHLTNIFDNKLL
>NC_003030.1|WP_010965259.1|2072360_2073956_+|recombinase-family-protein
MKVAIYSRKSKFTVKGDSIENQVEMCKNHIINRIGKNVDFLVYNDDGFSGKNLHRPKFQKMLIDAKAKKFDTLICYRLDRVSRNIADFSNLINTLQNLNINFISIKEQFDTSTPMGRAMMYIASIFAQLERETIAERVSDNMLEMAKSGRWLGGQTPLGFKSKPILYFDYENHEKKMFVLSPIEEELTVVKLIYKSYLKFQSISKVTKYLIQNSIKTKKGNLIWSKRSVKDILNNPVYVRADENVMNFLSNKGINVIGIPDNKHAILTYNKKKGIKKFRQTNEWIASISKHTGIINSKTWLKVQKIMIKNKSRAPRIGSTQNALLTGLLICKQCGNPMKIIHGPLDKEGKKLFYYKCSLKEKSGNSKCCNSNIRTDEIESVVIQKLHSISINKDILLNSLKSFRNLDKNTEIQNIKKIVKHKQDKIDNLIKFLSLSPSISENVVHEIEILNKDIKELNLKLEKIIKTKADFVDNEEVSNLILESLKRVYINNFFSIEEKKLILQKIVDYITWDGDNGIVDIHLINEASFLH
>NC_003030.1|WP_010965258.1|2072068_2072245_-|DUF1737-domain-containing-protein
MKEKLRYRLITGKDDSSFCERISKLLNEGYKLYGSPSCTFNGEDVIVAQAVVIDEDTI
>NC_003030.1|WP_013913686.1|2071876_2072041_-|hypothetical-protein
MLKIKKVTMNVSNNTKEIQEIYIEIVAKILKSRLPQEIINKILNELNKNDKINS
>NC_003030.1|WP_010965267.1|2081512_2081989_-|transcription-elongation-factor-GreA
MSRMLTKSDYDKLKEEYEYRNTVKRHEIAKKKMEAAAFGDRSENAEYKAAKEEYYHNNRRLGQISRLLKNAIIVEEDKIDDEVNIGSEMLLKIGADETFKAKLVTTLNISVEDEDIEYISVDSPFGKALYKKHVGDSIDVNLPDNRSIKDIKIISIKN
>NC_003030.1|WP_010965268.1|2082171_2083506_-|right-handed-parallel-beta-helix-repeat-containing-protein
MKINKILMVSIIFIFIFNLNICVIVKADANNSNETIVSSDGTGDYTNIQDAISAGKKNIIIKDGTYLLSSALIIKNNNTVITGASKTGVKIIQTNTAADGVVIYADNVKVSNLTVDCQKYAGRGTAIVEGHSNNVMVSNCIVYGSNSNFSIYFAGKDYSSDEDTIKAVENGDLDKNNVVKDCTVYSTNEGDGVILALQRYGKLLNNTIIGTRIAFYMCNSSQVCGNTINDSKSHGIFVSIPAFNNIIENNIINNCALSGIKVAAETEHTNPEINNHTYMGTGFTIDNNKIINPAYFGIEIDELADSTIVSNKLSKCDYVGIYMLRSNNLHVVQNCVIDSGYGVNEPKDSNYSKNLSKNIKWDLNSNAAIFVDYNTKYIAIISNSIDNMTSGCAHAIFESNFDNNEAKDNFYVDNVIRGSYGSKTTNVNIDYSVLPLFYIGRFIR
>NC_003030.1|WP_010965269.1|2084046_2084859_+|right-handed-parallel-beta-helix-repeat-containing-protein
MNKKILSLLTSVAIISSVASFGVQAKSVNAKGDIASKLEAGGVIPAGNYTLNRGVKVTKPISAEGVVIDASACPKGTIAIVARANISGITINNAKRQGISVQNCSGITIKNCKVTKAQFAGIEAKDNVSNVTFENCESDYNFDNANGGEDADGFGIKNGAKNITLKNCVAIGNSDDGYDTYTAGSNITFLGCRAQNNGSGKNGDGNGFKLGPCLYKNQDGGLVTVKNCTALNNKGVGFLRNHNKVAPVQSGNIASGNKGGDFKWDYTPRK
>NC_003030.1|WP_010965270.1|2084922_2086698_-|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MHKKFNYRLIICIFILHTLICIYLLTPLIVIRSEFIKRSSLNKFIDINELINMYKHPFISFNTIINNLDIRNDFVIVFLLFTSGISLFVFLYRNMDSEEKGINHLRNNGTQGTANWMKNSEIKKVLTIGGGEGLVFGSIKEGFGNKMVILPKDTFFNKNIAVFGASGSMKSRSFVRPNIMQISELNQSMVITDPKGEIFESMSEFLRDMGYTVKVFNLVNMRNSDRWNPLGEITDEISAQSFAETVIANTRTLGSRQDDFWEKTEMNLLKALVLYVVKENPKEERNLSAVYSMLSLRDTASIDNLFRTLSSSHEAKMPYNIYSQASENVKSGVIIGLGSKLQVFQNKLVCELSAESDIDLTLPKKEKCAYFCITSDMESTFDFIAGLFFSFLFIKLVKYADYTPKEAQKEVYFILDEFPNIGAIPDFTKKISTMRSRGISSLIIFQNIAQLQNRYPNNGWSEIIGNCDSRLFLGATDMITSEFVSKLLGTATVNDRSFSKSAGFKGIMDFGKITDKSIKRNLMNPDELLRLPNENEILILRGQKPIMLQKMDYTKHRLSKFLRSIKVSDHIPEWPHKLKDNNRSNEKCEFW
>NC_003030.1|WP_010965271.1|2086718_2086940_-|hypothetical-protein
MAKNFYSNFKIKSIMPKVGDVIIKDCGEIKDNFVIAKEYENYFLAISARLGFKECFTKASFFTCELKVKYELR
>NC_003030.1|WP_010965272.1|2086955_2087453_-|hypothetical-protein
MYYINLKQERILKFIEKFGVARIEHMKRILNIKDIDNQFKILIRQRKVKLVFNDICVLDGKKELNIKMIKALDLYSYLHLNNGGIPIEWCMPQDFPFTIAFFRNSKVFDVAIINEGEETIYSSAINRGVSERVIVVLSEENQKENIKINKQIKCCTIEDGVLNFF
>NC_003030.1|WP_010965273.1|2087512_2088112_-|prepilin-peptidase
MVITFIYGIAIGYMTVNIAGGICKKELTYEFTTKECSIVAMILGLIYCLFYRKSMLGFEFFKHCVIATMLFLAALIDFKTKNVYFFITIISFLFSTVFVMITYFSGNCIEDYVVGAVAMGIISYIFALFKVIGLGDVEIFIICGISIGFYKSIEVLILSIFLCGIYGIFKIIKNIAIKKERVAFVPYILMAFVVVSLGI
>NC_003030.1|WP_010965274.1|2088180_2088825_-|hypothetical-protein
MKKFSILNGRNKFTKRAKIKSNKMKLLIGAMGLILCCELLVGVVYKLHDKKTVEQKKIEAEKTPSKAKKKNTTKAESKPEVKAATNTQNATVPQSKDSNQKVDTSGAANSPSSNTASNKTSKSSSPNNTSQKPNNNRVGQESKNVTQSQTTRRTTQTTTPAVHPTQEPSQPVVNEPQQPAVQNQDQQNKITSQDEIDASKSQDEIMKEIHNNGN
>NC_003030.1|WP_010965275.1|2089024_2089678_-|hypothetical-protein
MNFRKSNIKILISTVLMSCAAFGCLIMAENKIINSSGKKDVIIASKDIKQGTAIDKSSLKKVEYYRECVNSDSVTNMEYMGNKYASENIYKGEVISKKRVLDKNDDLKPFLKENEKEISIPLSKFNNDTFIGTLREGDIVDIVHTSVVNEKAEDEVEAKGLKVIGAVDSQGRFLKEQDKNILAASLVFLGSEEEFIKISKDFYIGYFTIARCSKVKK
>NC_003030.1|WP_010965276.1|2089693_2090263_-|hypothetical-protein
MQISKLKGDASIAVLSLFTVILMGLCLEFVFFHKLIMKEAEGVQDDVILSNLAVYKDVDMEALSFKEGCLKISDYNAAFKTFKDHLQKNMRLDNNFNSLNGQFIEGNVTIDEFTIYNVENNYVEILTYSRENNEFTRREIKNRSINVVKTTDNVVVKNTSVHAAISYDVRLLFGQKKRVMTSVDTDVVN

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Crispr_ID: NC_003030_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_003030_3

2139626-2139721

Orphan

Consensus_repeat	Method
CTGTAGCATCAACATAATTACCATCAATATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_003030_3

>merge|NC_003030|3|2139626-2139721|CRISPRCasFinder
CTGTAGCATCAACATAATTACCATCAATATCTGCGGTTCGTCTGAGTGATTTGATTATTTCACTTCTGTAGCATCAACATAATTACCATCAATATC

>NC_003030|3|3|2139626-2139721|CRISPRCasFinder
CTGTAGCATCAACATAATTACCATCAATATC	TGCGGTTCGTCTGAGTGATTTGATTATTTCACTT
CTGTAGCATCAACATAATTACCATCAATATC

Protein	Signature genes	Signature genes Name	Protein_function
NC_003030.1\|WP_010965320.1\|2132341_2134252_-\|molybdopterin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|237732
NC_003030.1\|WP_010965335.1\|2142441_2142912_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965330.1\|2140150_2140615_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965338.1\|2144563_2144914_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965336.1\|2142913_2143402_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965333.1\|2141607_2142201_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965321.1\|2134317_2135541_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|223380
NC_003030.1\|WP_010965339.1\|2144929_2146306_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965317.1\|2128578_2128890_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|223314
NC_003030.1\|WP_010965325.1\|2136716_2137139_-\|SRPBCC-domain-containing-protein	unknown	unknown	gnl\|CDD\|176874
NC_003030.1\|WP_010965316.1\|2127837_2128575_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|119339
NC_003030.1\|WP_010965331.1\|2140780_2141023_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965328.1\|2138936_2139569_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965322.1\|2135556_2136054_-\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	unknown	unknown	gnl\|CDD\|238451
NC_003030.1\|WP_010965337.1\|2143857_2144517_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965334.1\|2142218_2142407_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965332.1\|2141029_2141479_-\|hypothetical-protein	unknown	unknown	unknown
NC_003030.1\|WP_010965326.1\|2137238_2137781_-\|flavodoxin	unknown	unknown	gnl\|CDD\|223503
NC_003030.1\|WP_010965318.1\|2128926_2130981_-\|aldehyde-ferredoxin-oxidoreductase-family-protein	unknown	unknown	gnl\|CDD\|225277
NC_003030.1\|WP_010965319.1\|2131021_2131972_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408

Protein	Function_ID	Function_description	E-value
NC_003030.1\|WP_010965316.1\|2127837_2128575_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|119339	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.	6.33396e-60
NC_003030.1\|WP_010965320.1\|2132341_2134252_-\|molybdopterin-biosynthesis-protein	gnl\|CDD\|237732	PRK14498, PRK14498, putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; Provisional.	0
NC_003030.1\|WP_010965322.1\|2135556_2136054_-\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	gnl\|CDD\|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	5.44326e-70
NC_003030.1\|WP_010965318.1\|2128926_2130981_-\|aldehyde-ferredoxin-oxidoreductase-family-protein	gnl\|CDD\|225277	COG2414, COG2414, Aldehyde:ferredoxin oxidoreductase [Energy production and conversion].	0
NC_003030.1\|WP_010965321.1\|2134317_2135541_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	1.52996e-154
NC_003030.1\|WP_010965326.1\|2137238_2137781_-\|flavodoxin	gnl\|CDD\|223503	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion].	2.10913e-08
NC_003030.1\|WP_010965317.1\|2128578_2128890_-\|acyl-carrier-protein	gnl\|CDD\|223314	COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	0.000156777
NC_003030.1\|WP_010965325.1\|2136716_2137139_-\|SRPBCC-domain-containing-protein	gnl\|CDD\|176874	cd08865, SRPBCC_10, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	3.87735e-16
NC_003030.1\|WP_010965319.1\|2131021_2131972_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	6.40786e-86

>NC_003030.1|WP_010965328.1|2138936_2139569_-|hypothetical-protein
MNINQVARLLNKVNIKTISGENFIEEYHEQGENYYKVEKKDREWFFSFVKGERKTEEEEEIKETFDNEQDASKYYYLIELSKRYHNKYIYKFQMNNEDINIGEYECSLNNLKGAFERIGVKDIYYNFNNFIKEHSICLEKIDNETSRVKFIGNYNKVIIQTLKLENWLAYYTMYRRVYALFLLDKHCELLIKAGEIDKTFTDEEYSIFIK
>NC_003030.1|WP_010965326.1|2137238_2137781_-|flavodoxin
MLKKIILIIGIILILLIIVMVLMFSRLNKPRQANQKILKAKEANPKRALIVYQPSMSSITDEVANQIAKGLNTQGYEVTLNYPSNHLSTNVSDYSIIIFGTPTYGGKPLSIVTDYISKIKNISPSQKIVLFSTGGDMSKKSEIDIMEKYLNGVKPYRKIKFESKKFKEEAYEFGKKLLTQ
>NC_003030.1|WP_010965325.1|2136716_2137139_-|SRPBCC-domain-containing-protein
MVYAKASALIEKQIEQVYEFVLNGENLKLWKHNIYNVKNTSGEPVDVGTVFSQEIRIPTGRIINADFKIIECEKNKKVAFEVLKGPYKPIGIYSLESIDNKTRVTFTMQEEVEMNEKTKAHIENVVNTIHGLKLYLEANK
>NC_003030.1|WP_010965322.1|2135556_2136054_-|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein
MIKIAILTISDKGSRGERVDGTGLELKKLLANLGYEISFYKIIPDERRDIEKELIYLADELKVNLILTNGGTGFAKRDVTPEATKSVIEKDVPGISEVMRMNSVKINSHAMLSRGVSGIRKDSLIINLPGSTKAAIESLEFVLPAIPHGIDILNGYSLNSSYIHS
>NC_003030.1|WP_010965321.1|2134317_2135541_-|molybdopterin-molybdotransferase-MoeA
MNFFKVSSVDETKDIIDEYFHLEVEGEQVDIFNCVNRIAFDYIRADCNIPEFKRSTVDGFAVNSRDVFGATEAIPAILTLKGEILMGKVTDFNIVDGECAYVPTGGMLPEYADSVIMLEYTQKLDEDTILVYSPVASGDNVIQKGEDIQNDNIVIRKGEKIRPYEVGVLASIGIKHVNVCKKIKVGIISTGNELIACEDELTLGKIRDINTYMLWAAIIDDGAEPINYGIVKDDYKLLKHTICRATEECDILVISGGSSVGKKDQTIKAIEDFEDGKILVHGVSVKPGKPTIVAKKGDKIIFGLPGHPLACSIVYIIFIREYINKAMCYKKEVYAVKSIMSINYHKAKGREEYLPVALENDGDRIIAKPIFGKSGLISTFSRAWGYIKIEKDLEGLREGQVVEIYKL
>NC_003030.1|WP_010965320.1|2132341_2134252_-|molybdopterin-biosynthesis-protein
MANEIYLSNKDLDESIKLYFNELLPIKSEKEILNTYEALGRVSFSPVYAKISSPFYNSSAMDGIAVDSKKTYGASDRNHVELVENKDYIVVDTGDPIPKEYDAVIMVEDLINIDKHKVAIYKSAIPWQHIRTIGEDIVEKQLIIPSKHVITPVDIGAMIAGGINKVCVYKMPVVGIIPTGDEIVEPGGELKTGDIIEFNSRVFSAQVKEWGGNPVRFDIVKDDYELIKGVVATAVDKCDIVLVNAGSSAGREDFTCSVIKDLGKVLVHGISVKPGKPVVLGIIKDKPVIGIPGYPVSAYFIMENICKKVVYSYNGMNLIEKKKRQATLSRRIMSSLKYLEFVRVKLACISGKYIATPISRGAGNTMSLVRADGILKIPQNIEGYEAGTKVKVELLKDEEEIKNTLTCIGSHDIILDIVSDLLHVKEDKYFLSSAHVGSMGGIMALKSGETHIAPIHLLDMKDGTYNISYIKKYLCDKNIALIKGVKRIQGLMVPKGNPLNLKSIEDISKFRRRFVNRQRGAGTRLLLDYNLKKLNISSKDINGYEREEFTHIAVAAVVAAGDADCGLGVYSAAKLMNLDFIEIGNEEYDFAIPKEFLKMDVVKKFIEVIQSNEFKRELDKIGGYNYENIGSIKGFF
>NC_003030.1|WP_010965319.1|2131021_2131972_-|ACP-S-malonyltransferase
MRLNELYSGKNAFIFQGVGIKYQKFLTLLDESQRELLKEYCSIVYKKIKLDLWGYLTRSLSGEYDDKFSDWVSIYTIDCVVYNTYIEDGIKPSVLLGYSMGLITALACGKAISFEEGLELLSMSYNYPKYTSRKDEGMGLVTGMTCSDIKKIIDKNELGDYAYIASENNEYCILVSGMKNRVDKLLSIALTEGALSAKDIDSPYAFHSKYALIGIEEYEKLVSRLCVCNLKIPIISSYDQRIIVDSCELKKELVKNVWGEMKWMASVEKAININNYNFFEVSLIDSISRFSRMINSNCKFFTYKSFMKIKNVQVQN
>NC_003030.1|WP_010965318.1|2128926_2130981_-|aldehyde-ferredoxin-oxidoreductase-family-protein
MNSKVIDNNIVYINLSEKKVTYERITCEYRKKYIGGTGINTKILFESEAMYNDALSEKNVLIFGAGAAVGTSLLTGNRSTITAKSPLTDIYGDSNIGGSFPTTMRSVGIDHLVFQGKSENPIYIFIDEKGNVKFEDASDLWGFYTDKTTDILSKRHNNCEISCIGPAGENLIRYASVFMSKTHVAGRMGMGCIMGSKKLKAIVIERKKCEVPMYNREKIRSISKLWIEQSHTSIQFKVMGLSGTLLLMDKYGEAKCLPVENAQRGYDKKCENLSPMVFKKEFETKKVPCKFCTLGCGKAYEIKKGKYKGEKGERIEYGSATSFGPNVGIYDYSDVLHLKLLCDKLGMDTIEVAATIALILECQKRGVLREDITEGRKFQFGNVDDIEYLMHKISDRSGIGDILAEGAYRASKTLKVEKYAFCIKKASTGLHSNQKKAWSLGYITSTRGGDHLKDFPFTSVFSNPLTDSLGTHIFKRKFKGTLSKDKEQGRVVWWHENYKYVIDSLGICLFCMQSITPQGHAFFDEFAEILSALFNIEVTKEDMFYAGERIYQLQNAFNINCGMKLEDYKWPSREKEEDIEDEFIKDSTIEVRDSPGMLPEYFYFRGLSSEGFPTTKRFKELQLDEYIERIKVDDSAITDSFENLLLKVSLNVNLKFMEKLIGRLVYKIVAKKIDKQVALLNQNK
>NC_003030.1|WP_010965317.1|2128578_2128890_-|acyl-carrier-protein
MRELTSEIKKEIRDIVYDFFSEECEVDINELNDNTSVVDDLDGDSLMLIELVDILKKKYSLNIQLQSIGKYLLKNPAETLEKVVQTTYLLYEYENDITNVGEK
>NC_003030.1|WP_010965316.1|2127837_2128575_-|enoyl-CoA-hydratase/isomerase-family-protein
MSKEIYESGIVNFSIEDKIGILTISNGKQNKLDKADFLDLNYLKQWIDSSYLRGLIIYGEGRHFSSGANVDNLRVNKENIEYLRESLECGKKILSYIEALPIITVAAISGICFGGGLEIALSCQFRICTENAIFGFPEANIGIMPGLGGTIRLPKLVGKRKALNMIVSGKYIDAEEAFSIGLVDKIVDNKSHISYSKQFINELFEGKTTRQIKSIINSVNNSFVKTSEVALKSEGEMFLNLVKKL
>NC_003030.1|WP_010965330.1|2140150_2140615_-|hypothetical-protein
MYEVQRGERFEICEFEDYNFAVCGIYVLIKKIFEHPNAKLSVKCEISKCDEDELDSIAKILEKEFNKEFFSIGEFKSKAIMIENVDGLYDVNYCREDNQLYNIVKGREFSNAIIVFYNYILLLSEFEKLITCITLIIPLTSEIKEKLKCCYLGK
>NC_003030.1|WP_010965331.1|2140780_2141023_-|hypothetical-protein
MTKDQLKIKLINNQIPKEVYSLDGRRPNEAYCLNYVNGKWETYYSERGIKSEREEFDNENDACNYFYKWLIESLKSMGII
>NC_003030.1|WP_010965332.1|2141029_2141479_-|hypothetical-protein
MIFLDNYSKKNTYINITSEGYSIVDANSIKDIENGVGGFSEDGELLGLYIDDGKLYFQYNNKSYETKPDEINCTNEILDDGKRNFRVKIKEVLVCNIIYKPYISPFVLTFGDDEDEFDFLLYLSNLMVDENSILNFIMRLNNLNKYYSK
>NC_003030.1|WP_010965333.1|2141607_2142201_-|hypothetical-protein
MWLFSEQEIAKEYAQYYQFKRKDIYLVKMVEFDELLLTSYFAMFAGVCQVIIDEGRNFMTCSIFDLVNECFIKQGQPPVLTKSEYPIMNTLNSLRFLNNKLWVITSEDKADEKLVTRKITPIIERDCIKVFTDETECKKYGKEYVNKKEISIDINRLQDIIKILIENNIKNVEFVIDNVKTKMSATKLYNILQRMNI
>NC_003030.1|WP_010965334.1|2142218_2142407_-|hypothetical-protein
MSIFIQEKINELNKICKGSEKYIEKYNEILKSIVSLKGLYTIVNRNTTDDDVKNNKGKFFLD
>NC_003030.1|WP_010965335.1|2142441_2142912_-|hypothetical-protein
MKYSIYKGKLYLSSIRNMKVRLRSRVYEEGFKELVDLLGNIHNDIFIKEVTIEDVDIIYNIEYKVIYKGREFIPWAVGKFILDTGKITLGTNDEKEARLYNFKKVEQFVFKKEVEIEEVDALIEIKKPILKFESMGEQVTRIEPKYIKDYLKKLLE
>NC_003030.1|WP_010965336.1|2142913_2143402_-|hypothetical-protein
MTKVIPQSDIYKYLYDEEYKGVRGFIAVDEHSKNLKTLYENYEGARLDYDGTMFKIDNGVNGVSTQIGIPDKFYGTIEYKENNPAKLIIPRWEANAENYPYTARGFTGSKNVVLPEFTYERGYVGNFQSGDILNIRDSNNGKVIQQFIYDEDLTEKWIIGVK
>NC_003030.1|WP_010965337.1|2143857_2144517_-|hypothetical-protein
MYNDHIRNRIIEISKKQECLLELLQMLSREAMIYYCPCDSENSLAKVIINKNKYVVIATSKEILTESKHYLNINNIIEVDAISIIRNILRMEIQGAIINLGDESQLVLDTNMLKLLYREVIVMDLYIKGGAYVIQNNKDYLLVDVEGIRYLNIALTEDDSEKLKKELNEKGNILFKSWKEIFPYFVVTKCNALIYNFNKKDMVLIEEPYLGWLYDSPFQ
>NC_003030.1|WP_010965338.1|2144563_2144914_-|hypothetical-protein
MLLGKYTVYMQRQYEVLDYDKKNKIIKLKSDDSDLKYKTIKRSDVEQIYYIQTNCIYKGYKFQVISEKEDSILIYTSNNEVGVKLNMEFIERSVYHKWIRKSEVDTILEDKTILNL
>NC_003030.1|WP_010965339.1|2144929_2146306_-|hypothetical-protein
MADKIKMEYMIMDSMTFEFRTMGGNLDNIIKDLNKILVSLELSYISAASLIICQNITDSLKLGKQITNNIYKLSIKLNDAKATIANSDKALAASMGLASGAVLYRGNDDENLDKVLKEADKTTKEVDGFLKEFDKEEEMEKKAWYNKPAKEDIFDKIEYFVTGKKPRVRTQVEEVMDAQLTEMAFSNQNAVAELQNEFEIGARGLASMDRINEAIENGKEMPLVNVGKNQGVSDTNFSKSEVLKINSFQEDISSILKNEKISLDEFNSMRMKGASELTNEQRRIMMKIREQVPNPQNDTILQKVIDGGKINNYIKEDNPWNTVGGFITKAQDAKALSTLQEVYHGLALGYKNTPFTVGVDKDYGIIRFKTDAVDKIDIPYGPTMEVVGAKPPIGGFDTSPDPFTGHGFTKDIYGNIIPEYTMQYLKPNEGAELYRVNSKTGIEELIGKYINDKFIKIK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

630915 : 640922

Bacillus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010963863.1\|630915_632643_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.5e-12	26.6
WP_010963864.1\|632837_634577_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_010963865.1\|634655_635141_-	permease	NA	NA	NA	NA
WP_010963866.1\|635282_635507_+	hypothetical protein	A0A172JI00	Bacillus_phage	2.2e-14	47.9
WP_171779429.1\|635589_635946_+	DUF4064 domain-containing protein	A0A0S2MVJ2	Bacillus_phage	4.4e-09	64.6
WP_010963868.1\|636110_636590_+	glyoxalase	NA	NA	NA	NA
WP_010963869.1\|636569_637004_-	ImmA/IrrE family metallo-endopeptidase	A8ATJ8	Listeria_phage	8.6e-07	32.7
WP_010963870.1\|637028_637451_-	helix-turn-helix transcriptional regulator	M9Q2L3	Clostridium_phage	2.9e-15	39.3
WP_010963871.1\|637685_638114_+	RNA polymerase sigma factor	A0A1V0E028	Clostridioides_phage	1.4e-09	28.4
WP_010963872.1\|638949_639456_+	Ig domain-containing protein	NA	NA	NA	NA
WP_010963873.1\|639725_640922_+	Ig domain-containing protein	A0A1P8BL30	Lactococcus_phage	4.3e-08	45.7

DBSCAN-SWA_2

1531689 : 1540195

Cyanophage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010964698.1\|1531689_1534011_+	Ig-like domain-containing protein	A0A0C5KL53	Enterococcus_phage	3.3e-20	42.4
WP_010964699.1\|1534298_1534778_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.3e-27	46.2
WP_010964700.1\|1534779_1535487_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	1.3e-44	44.1
WP_010964701.1\|1535591_1537019_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	6.0e-57	33.3
WP_010964702.1\|1537042_1538041_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SQF5	Cyanophage	1.7e-66	45.6
WP_010964703.1\|1538028_1538643_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.8e-24	38.7
WP_010964704.1\|1538695_1540195_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.7e-65	45.6

DBSCAN-SWA_3

1945791 : 1995420

Klosneuvirus(16.67%)

coat,holin,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010965102.1\|1945791_1946811_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_010965103.1\|1946832_1947882_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
WP_010965104.1\|1948182_1948632_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_010965105.1\|1948645_1949707_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_010965106.1\|1949747_1950014_+	YlxR family protein	NA	NA	NA	NA
WP_010965107.1\|1950006_1950315_+	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA
WP_010965108.1\|1950330_1952412_+	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	1.2e-26	25.2
WP_010965109.1\|1952447_1952813_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_010965110.1\|1952799_1953765_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_010965111.1\|1953767_1954637_+\|tRNA	tRNA pseudouridine(55) synthase TruB	A0A1V0SAB3	Catovirus	4.5e-07	25.1
WP_010965112.1\|1954648_1955560_+	bifunctional riboflavin kinase/FAD synthetase	A0A1V0SJE1	Klosneuvirus	1.1e-06	30.9
WP_010965113.1\|1955690_1955954_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_010965114.1\|1956209_1958321_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_010965115.1\|1958443_1958719_+	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
WP_010965116.1\|1958733_1959933_+	aspartate kinase	NA	NA	NA	NA
WP_010965117.1\|1959995_1960676_+\|protease	ClpP family protease	NA	NA	NA	NA
WP_010965118.1\|1960689_1962987_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.3e-87	49.2
WP_010965119.1\|1963080_1964418_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_010965120.1\|1964401_1965013_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_010965121.1\|1965170_1966220_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.3e-122	63.0
WP_010965122.1\|1966445_1967990_+	ribonuclease Y	NA	NA	NA	NA
WP_010965123.1\|1968187_1968448_+	stage V sporulation protein S	J9PTX7	Bacillus_phage	1.9e-09	42.2
WP_171779443.1\|1968561_1969425_+	decaprenyl-phosphate phosphoribosyltransferase	NA	NA	NA	NA
WP_010965125.1\|1969467_1970664_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_010965126.1\|1970791_1971052_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_010965127.1\|1971225_1972656_+	adenylosuccinate lyase	NA	NA	NA	NA
WP_010965128.1\|1972738_1973584_+	L,D-transpeptidase	NA	NA	NA	NA
WP_010965129.1\|1973729_1974035_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.9e-13	40.8
WP_010965130.1\|1974038_1976291_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.6e-147	38.2
WP_010965131.1\|1976570_1977476_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_010965134.1\|1978562_1979942_+	TldD/PmbA family protein	NA	NA	NA	NA
WP_010965135.1\|1979943_1981308_+	TldD/PmbA family protein	NA	NA	NA	NA
WP_010965136.1\|1982703_1983090_-	Zn-finger domain-containing protein	NA	NA	NA	NA
WP_010965137.1\|1983310_1983925_+	transcriptional repressor LexA	A0A139ZPI6	Marinitoga_camini_virus	7.4e-12	40.2
WP_010965138.1\|1983964_1985245_-	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_010965139.1\|1985327_1985573_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_010965140.1\|1985633_1986563_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_010965141.1\|1986586_1988455_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	8.6e-88	36.1
WP_010965142.1\|1988473_1991083_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.8e-51	26.0
WP_010965143.1\|1991113_1992439_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_010965144.1\|1992616_1992784_+	hypothetical protein	NA	NA	NA	NA
WP_010965145.1\|1992884_1993760_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_010965146.1\|1993817_1994888_-\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_010965147.1\|1995042_1995420_-\|holin	holin family protein	D9ZNF2	Clostridium_phage	2.7e-25	45.5

DBSCAN-SWA_4

2024315 : 2045735

Clostridium_phage(27.27%)

tail,portal,terminase,head,capsid,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010965184.1\|2024315_2028527_-\|tail	phage tail protein	D9ZNF0	Clostridium_phage	9.8e-47	33.6
WP_010965185.1\|2028558_2028933_-	DUF1617 family protein	M9Q2L1	Clostridium_phage	1.4e-21	42.4
WP_010965186.1\|2028919_2029186_-	hypothetical protein	NA	NA	NA	NA
WP_010965187.1\|2029204_2030413_-	hypothetical protein	NA	NA	NA	NA
WP_010965188.1\|2030414_2035874_-\|tail	phage tail tape measure protein	D9ZNE6	Clostridium_phage	8.2e-38	40.1
WP_010965190.1\|2036089_2036419_-	hypothetical protein	NA	NA	NA	NA
WP_010965191.1\|2036472_2037393_-	Ig-like domain-containing protein	NA	NA	NA	NA
WP_010965192.1\|2037437_2037761_-	hypothetical protein	NA	NA	NA	NA
WP_010965193.1\|2037757_2038189_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_010965194.1\|2038189_2038537_-\|head	phage head closure protein	A0A0U4JE41	Bacillus_phage	1.4e-07	33.7
WP_010965195.1\|2038499_2038817_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_010965196.1\|2039104_2040295_-\|capsid	phage major capsid protein	A0A0K2CZ99	Paenibacillus_phage	1.5e-109	54.1
WP_010965197.1\|2040296_2041067_-\|protease	Clp protease ClpP	A0A2I7SCY8	Paenibacillus_phage	4.3e-78	62.0
WP_171779428.1\|2041029_2042244_-\|portal	phage portal protein	A0A0U3SQF0	Bacillus_phage	3.1e-131	61.9
WP_010965199.1\|2042285_2044076_-\|terminase	terminase large subunit	A0A1B1P7R3	Bacillus_phage	1.4e-207	60.2
WP_010965200.1\|2044050_2044506_-\|terminase	phage terminase small subunit P27 family	A6M947	Geobacillus_virus	1.9e-28	43.2
WP_010965201.1\|2044681_2044993_-	HNH endonuclease	A0A0K2CYS9	Paenibacillus_phage	3.5e-18	55.8
WP_010965202.1\|2044999_2045263_-	hypothetical protein	NA	NA	NA	NA
WP_010965203.1\|2045357_2045735_-	hypothetical protein	A0A2H4J4N9	uncultured_Caudovirales_phage	2.9e-35	64.8

DBSCAN-SWA_5

2050590 : 2064763

Clostridium_phage(35.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010965215.1\|2050590_2050812_+	helix-turn-helix domain-containing protein	A0A1Z1LZP5	Bacillus_phage	1.0e-11	51.6
WP_010965216.1\|2050842_2051055_-	hypothetical protein	A0A1P8VVT3	Streptococcus_phage	2.1e-14	62.7
WP_010965217.1\|2051107_2051326_-	Zn-finger containing protein	NA	NA	NA	NA
WP_010965218.1\|2051556_2051829_-	hypothetical protein	NA	NA	NA	NA
WP_010965219.1\|2052001_2052529_-	hypothetical protein	A0A0A7RVX8	Clostridium_phage	8.2e-20	37.9
WP_010965220.1\|2052660_2052852_-	hypothetical protein	NA	NA	NA	NA
WP_010965221.1\|2052899_2053241_-	hypothetical protein	NA	NA	NA	NA
WP_010965222.1\|2053323_2053545_-	hypothetical protein	NA	NA	NA	NA
WP_010965223.1\|2053591_2053993_-	single-stranded DNA-binding protein	A0A290GHL8	Caldibacillus_phage	1.8e-30	50.0
WP_010965224.1\|2053997_2054180_-	Zn-finger containing protein	NA	NA	NA	NA
WP_010965225.1\|2054179_2054464_-	hypothetical protein	NA	NA	NA	NA
WP_010965226.1\|2054551_2054749_-	hypothetical protein	NA	NA	NA	NA
WP_010965227.1\|2054760_2055093_-	hypothetical protein	A0A0A7RWJ7	Clostridium_phage	1.5e-19	47.3
WP_010965228.1\|2055093_2055597_-	hypothetical protein	NA	NA	NA	NA
WP_013913566.1\|2056050_2056203_-	hypothetical protein	NA	NA	NA	NA
WP_010965230.1\|2056195_2056573_-	hypothetical protein	A0A0A7RVR5	Clostridium_phage	4.1e-21	41.0
WP_010965231.1\|2056565_2056832_-	hypothetical protein	NA	NA	NA	NA
WP_010965232.1\|2056947_2057163_-	hypothetical protein	NA	NA	NA	NA
WP_010965233.1\|2057199_2057571_-	nucleotide pyrophosphohydrolase	L7TJ47	Halovirus	7.6e-12	55.2
WP_010965234.1\|2057560_2057755_-	hypothetical protein	NA	NA	NA	NA
WP_010965235.1\|2057845_2058373_-	hypothetical protein	NA	NA	NA	NA
WP_010965236.1\|2058382_2059231_-	ATP-binding protein	A0A1B1P8D0	Bacillus_phage	8.3e-38	37.9
WP_010965237.1\|2059169_2060009_-	phage replisome organizer N-terminal domain-containing protein	A0A0A7RTS3	Clostridium_phage	1.8e-61	59.1
WP_010965238.1\|2060109_2060421_-	hypothetical protein	NA	NA	NA	NA
WP_010965239.1\|2060431_2061121_-	hypothetical protein	A0A0E3Y6D2	Fusobacterium_phage	3.4e-42	45.6
WP_010965241.1\|2061263_2061839_-	HD domain-containing protein	A0A2H4J8L1	uncultured_Caudovirales_phage	3.1e-20	37.0
WP_010965242.1\|2061841_2062036_-	hypothetical protein	NA	NA	NA	NA
WP_010965243.1\|2062086_2062290_-	hypothetical protein	NA	NA	NA	NA
WP_010965244.1\|2062294_2062534_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0K2CZ86	Paenibacillus_phage	1.4e-22	66.7
WP_013913567.1\|2062660_2062813_-	hypothetical protein	NA	NA	NA	NA
WP_010965245.1\|2062825_2063014_-	hypothetical protein	NA	NA	NA	NA
WP_010965246.1\|2063097_2063586_+	DUF2321 domain-containing protein	A0A1Q1PVY6	Staphylococcus_phage	7.6e-28	39.0
WP_010965247.1\|2063574_2064015_-	hypothetical protein	NA	NA	NA	NA
WP_010965248.1\|2064028_2064763_-	phage antirepressor Ant	A0A0A7RUT3	Clostridium_phage	4.7e-74	58.5

DBSCAN-SWA_6

2161782 : 2168778

Stx2-converting_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010965357.1\|2161782_2162838_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.1e-20	26.4
WP_010965358.1\|2162970_2163498_+	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_010965359.1\|2163490_2163967_+	GerW family sporulation protein	NA	NA	NA	NA
WP_010965360.1\|2164053_2164662_-	segregation/condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	7.3e-20	34.5
WP_010965361.1\|2164654_2165404_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.4e-09	40.5
WP_010965362.1\|2165378_2166560_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A219YCT8	Aeromonas_phage	3.7e-20	34.2
WP_010965363.1\|2166634_2167849_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	4.7e-34	31.4
WP_010965364.1\|2167962_2168778_-	purine-nucleoside phosphorylase	Q5YFI9	Singapore_grouper_iridovirus	1.5e-60	40.1

DBSCAN-SWA_7

2438805 : 2446341

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010965628.1\|2438805_2439363_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.9e-51	55.9
WP_010965629.1\|2439459_2440515_-	dTDP-glucose 4,6-dehydratase	H9NC62	Sphingomonas_phage	1.5e-76	48.4
WP_010965630.1\|2440557_2441424_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.7e-100	62.2
WP_010965631.1\|2441528_2442434_-	NAD-dependent epimerase/dehydratase family protein	A0A2H4UUK0	Bodo_saltans_virus	9.4e-48	37.9
WP_010965632.1\|2442462_2443374_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.1e-83	53.8
WP_010965633.1\|2443467_2444541_-	hypothetical protein	NA	NA	NA	NA
WP_010965634.1\|2444613_2446341_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	8.7e-143	44.2

DBSCAN-SWA_8

2983193 : 3046121

Bacillus_virus(16.67%)

coat,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010966134.1\|2983193_2984327_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.4e-29	36.2
WP_010966135.1\|2984519_2985149_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010966136.1\|2985443_2986124_-	ComF family protein	NA	NA	NA	NA
WP_010966137.1\|2986096_2987104_-	hypothetical protein	NA	NA	NA	NA
WP_010966138.1\|2987111_2989331_-	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	1.1e-65	28.7
WP_010966140.1\|2990053_2991229_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.9e-150	69.2
WP_010966141.1\|2992089_2992656_+\|protease	spore protease YyaC	A0A0A8WIQ6	Clostridium_phage	3.5e-24	34.9
WP_010966142.1\|2992843_2993866_-	rod shape-determining protein	NA	NA	NA	NA
WP_010966143.1\|2994046_2994301_-	sporulation transcriptional regulator SpoIIID	M9Q261	Clostridium_phage	5.3e-17	57.3
WP_010966144.1\|2994391_2995141_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_010966145.1\|2995361_2996399_-	stage II sporulation protein D	Q2XU88	Pseudomonas_phage	5.5e-36	36.9
WP_010966146.1\|2996633_2997890_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_010966147.1\|2997944_2998652_-	YwmB family TATA-box binding protein	NA	NA	NA	NA
WP_010966148.1\|2998856_2999258_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_010966149.1\|2999271_3000672_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_010966150.1\|3000684_3001533_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_010966151.1\|3001564_3003082_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_010966152.1\|3003092_3003632_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_010966153.1\|3003634_3004114_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_010966154.1\|3004162_3004408_-	ATP synthase F0 subunit C	NA	NA	NA	NA
WP_010966155.1\|3004481_3005147_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_010966156.1\|3005161_3005527_-	ATP synthase subunit I	NA	NA	NA	NA
WP_010966157.1\|3005962_3007141_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA
WP_010966158.1\|3007467_3008625_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A167RG65	Powai_lake_megavirus	2.7e-31	29.2
WP_010966159.1\|3008667_3009702_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_010966160.1\|3009764_3010253_-	cytidine/deoxycytidylate deaminase family protein	I6XGV1	Vibriophage	5.3e-13	35.7
WP_010966161.1\|3010600_3011263_+	metal ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-19	33.3
WP_010966162.1\|3011262_3012069_+	metal ABC transporter permease	NA	NA	NA	NA
WP_010966163.1\|3012128_3012758_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_010966164.1\|3012757_3013216_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_010966165.1\|3013270_3013723_-	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_010966166.1\|3013808_3014861_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	1.1e-50	38.7
WP_010966167.1\|3014872_3015451_-	hypothetical protein	NA	NA	NA	NA
WP_010966168.1\|3015471_3016551_-	peptide chain release factor 1	NA	NA	NA	NA
WP_010966169.1\|3016632_3017490_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_010966170.1\|3017486_3018440_-	DUF1385 domain-containing protein	NA	NA	NA	NA
WP_010966171.1\|3018446_3019034_-	thymidine kinase	G3MBK1	Bacillus_virus	6.1e-40	46.4
WP_010966172.1\|3019234_3019447_+	50S ribosomal protein L31	NA	NA	NA	NA
WP_010966173.1\|3019654_3021106_-	transcription termination factor Rho	NA	NA	NA	NA
WP_013913601.1\|3021349_3021691_-	hypothetical protein	NA	NA	NA	NA
WP_010966174.1\|3021888_3025362_-	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_010966175.1\|3025756_3027364_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.1e-155	52.9
WP_010966176.1\|3027578_3027866_-	hypothetical protein	NA	NA	NA	NA
WP_010966177.1\|3027957_3028371_-	DUF1934 family protein	NA	NA	NA	NA
WP_010966178.1\|3028387_3029419_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_010966179.1\|3029661_3031029_-	germination protein YpeB	NA	NA	NA	NA
WP_010966180.1\|3031249_3032404_+	UDP-glucuronosyltransferase	NA	NA	NA	NA
WP_010966181.1\|3032435_3033101_-	stage II sporulation protein R	NA	NA	NA	NA
WP_010966182.1\|3033344_3033761_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_010966183.1\|3033757_3034801_-	radical SAM protein	NA	NA	NA	NA
WP_010966184.1\|3034751_3035558_-	membrane protein	NA	NA	NA	NA
WP_010966185.1\|3035561_3036404_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_010966186.1\|3036518_3038081_-	DUF3794 domain-containing protein	NA	NA	NA	NA
WP_010966187.1\|3038624_3038861_-	Veg family protein	NA	NA	NA	NA
WP_010966188.1\|3039371_3040274_-	sporulation peptidase YabG	NA	NA	NA	NA
WP_010966189.1\|3040340_3041342_-\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_010966190.1\|3042133_3043258_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_010966191.1\|3043297_3044332_-\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_010966192.1\|3044343_3045099_-\|coat	spore coat protein	NA	NA	NA	NA
WP_010966193.1\|3045113_3046121_-\|coat	CotS family spore coat protein	NA	NA	NA	NA

DBSCAN-SWA_9

3826034 : 3830415

uncultured_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010966887.1\|3826034_3826445_+	6-carboxytetrahydropterin synthase QueD	A0A1U9WRB3	Streptococcus_virus	3.9e-09	33.3
WP_010966888.1\|3826447_3827113_+	putative 7-carboxy-7-deazaguanine synthase QueE	S4TZT1	uncultured_phage	4.1e-40	45.0
WP_010966889.1\|3827116_3827704_+	GTP cyclohydrolase I FolE	S4U0J3	uncultured_phage	7.4e-46	52.6
WP_010966890.1\|3827728_3828397_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	6.7e-59	51.7
WP_010966891.1\|3828427_3829396_-	ATP-binding cassette domain-containing protein	F2Y302	Organic_Lake_phycodnavirus	3.5e-08	28.3
WP_010966892.1\|3829395_3830415_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-13	28.6

DBSCAN-SWA_10

3842491 : 3849947

Paenibacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010966903.1\|3842491_3843472_-	dipeptide ABC transporter ATP-binding protein	M1IB70	Acanthocystis_turfacea_Chlorella_virus	1.6e-08	26.2
WP_010966904.1\|3843458_3844481_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-18	30.9
WP_010966905.1\|3844491_3845418_-	ABC transporter permease	NA	NA	NA	NA
WP_010966906.1\|3845436_3846357_-	ABC transporter permease	NA	NA	NA	NA
WP_010966907.1\|3846470_3846692_-	helix-turn-helix transcriptional regulator	A0A2H4JHB2	uncultured_Caudovirales_phage	1.4e-08	42.9
WP_010966908.1\|3847039_3847738_+	helix-turn-helix transcriptional regulator	G3MBD2	Bacillus_virus	1.2e-05	46.0
WP_010966909.1\|3847784_3848030_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0K2CZ86	Paenibacillus_phage	5.0e-20	59.0
WP_010966910.1\|3848231_3849110_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_010966911.1\|3849692_3849947_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0K2CZ86	Paenibacillus_phage	5.5e-14	46.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_003030

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection