Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_007356 Dehalococcoides mccartyi CBDB1, complete genome 1 crisprs csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL 0 5 2 0

Results visualization

1. NC_007356
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_007356_1 1201786-1202915 TypeI-E I-B,III-A,III-B
18 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_007356_1 1.3|1201937|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT 1201937-1201968 32 NC_041916 Vibrio phage pTD1 DNA, complete genome 176139-176170 7 0.781
NC_007356_1 1.16|1202732|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT 1202732-1202763 32 MH617190 Inoviridae sp. isolate ctjd25, complete genome 2015-2046 7 0.781
NC_007356_1 1.17|1202793|33|NC_007356|PILER-CR,CRISPRCasFinder,CRT 1202793-1202825 33 AP018277 Calothrix sp. NIES-4101 plasmid plasmid4 DNA, complete genome 119930-119962 7 0.788
NC_007356_1 1.1|1201815|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT 1201815-1201846 32 NC_041960 Enterococcus phage SAP6, complete genome 24473-24504 8 0.75
NC_007356_1 1.16|1202732|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT 1202732-1202763 32 NZ_CP014203 Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence 14751-14782 9 0.719
NC_007356_1 1.16|1202732|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT 1202732-1202763 32 NZ_CP007453 Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence 540971-541002 10 0.688
NC_007356_1 1.11|1202427|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT 1202427-1202458 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 1156317-1156348 11 0.656

1. spacer 1.3|1201937|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT matches to NC_041916 (Vibrio phage pTD1 DNA, complete genome) position: , mismatch: 7, identity: 0.781

tccagctt---gtttgactgctgtgccaactgcat	CRISPR spacer
---ggcttccagtttgactggtgtgccaacttcac	Protospacer
   .****   ********* ********** **.

2. spacer 1.16|1202732|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT matches to MH617190 (Inoviridae sp. isolate ctjd25, complete genome) position: , mismatch: 7, identity: 0.781

ctgtctatttctgaattagcataactactgaa	CRISPR spacer
cagtctattcctgaattagcagaacgccttga	Protospacer
* *******.*********** ***  ** .*

3. spacer 1.17|1202793|33|NC_007356|PILER-CR,CRISPRCasFinder,CRT matches to AP018277 (Calothrix sp. NIES-4101 plasmid plasmid4 DNA, complete genome) position: , mismatch: 7, identity: 0.788

ggcaaccctgtaatgcctgttaatctctgtaaa	CRISPR spacer
gggaacgctgtaatgcctgttaataccttggaa	Protospacer
** *** ***************** .**  .**

4. spacer 1.1|1201815|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT matches to NC_041960 (Enterococcus phage SAP6, complete genome) position: , mismatch: 8, identity: 0.75

catttctccatcagctatagcacc---cactcttg	CRISPR spacer
tatttctcaataagctatagcaccgtagaatc---	Protospacer
.******* ** ************    * **   

5. spacer 1.16|1202732|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014203 (Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence) position: , mismatch: 9, identity: 0.719

ctgtctatttctgaattagcataactactgaa	CRISPR spacer
ttgtctatttctgaataagcataatctacata	Protospacer
.*************** *******..  .. *

6. spacer 1.16|1202732|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007453 (Peptoclostridium acidaminophilum DSM 3953 strain al-2 plasmid EAL2_808p, complete sequence) position: , mismatch: 10, identity: 0.688

ctgtctatttctgaattagcataactactgaa	CRISPR spacer
agttctatttctgaatcagcttaactatgtct	Protospacer
   *************.*** ******.    

7. spacer 1.11|1202427|32|NC_007356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 11, identity: 0.656

tctggggcaggtcaggcccgctggcatggata	CRISPR spacer
actggggcgggtcgggcccgctggtcccccag	Protospacer
 *******.****.**********. .    .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 181552 : 188330 7 uncultured_Mediterranean_phage(33.33%) tRNA NA
DBSCAN-SWA_2 401411 : 416832 15 Bacillus_phage(20.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage