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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_007715 Sodalis glossinidius str. 'morsitans' plasmid pSG3, complete sequence 0 crisprs NA 0 0 0 0
NC_007714 Sodalis glossinidius str. 'morsitans' plasmid pSG2, complete sequence 0 crisprs NA 0 0 0 0
NC_007713 Sodalis glossinidius str. 'morsitans' plasmid pSG1, complete sequence 0 crisprs NA 0 0 0 0
NC_007712 Sodalis glossinidius str. 'morsitans', complete genome 1 crisprs DEDDh,DinG,cas3 0 0 21 0

Results visualization

1. NC_007712
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_007712_1 3158439-3158517 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 150426 : 157802 7 Salmonella_phage(33.33%) plate,transposase NA
DBSCAN-SWA_2 445139 : 450147 10 Ralstonia_phage(42.86%) portal NA
DBSCAN-SWA_3 453226 : 459746 10 Cronobacter_phage(71.43%) tail,holin NA
DBSCAN-SWA_4 582249 : 588002 11 Escherichia_phage(50.0%) tail,plate NA
DBSCAN-SWA_5 1137408 : 1241583 106 Enterobacteria_phage(16.67%) terminase,protease,tRNA,plate,portal,holin,transposase,capsid,head,tail NA
DBSCAN-SWA_6 1247897 : 1294714 45 Edwardsiella_phage(52.17%) terminase,lysis,transposase,holin,tail NA
DBSCAN-SWA_7 1355558 : 1415206 64 Burkholderia_virus(39.47%) integrase,tRNA,plate,transposase,capsid,tail attL 1353191:1353207|attR 1423928:1423944
DBSCAN-SWA_8 1523283 : 1542752 30 Bacteriophage(21.05%) protease,holin NA
DBSCAN-SWA_9 1669334 : 1720106 30 Phage_GMSE-1(16.67%) tail,protease,tRNA,holin NA
DBSCAN-SWA_10 1793943 : 1823478 32 Enterobacteria_phage(28.57%) integrase,tail,protease,tRNA attL 1780376:1780393|attR 1807407:1807424
DBSCAN-SWA_11 1904224 : 2023066 119 Bacteriophage(19.35%) terminase,integrase,plate,transposase,holin,head,tail attL 1936652:1936678|attR 1988012:1988038
DBSCAN-SWA_12 2037591 : 2048935 15 Bacteriophage(25.0%) terminase,holin NA
DBSCAN-SWA_13 2064565 : 2081748 17 Enterobacteria_phage(33.33%) holin NA
DBSCAN-SWA_14 2249861 : 2257031 12 Edwardsiella_phage(62.5%) tail NA
DBSCAN-SWA_15 2306694 : 2313356 9 uncultured_Caudovirales_phage(42.86%) capsid NA
DBSCAN-SWA_16 2654116 : 2681335 30 Bacteriophage(30.43%) tail,terminase,plate,holin NA
DBSCAN-SWA_17 2774910 : 2838925 58 Salmonella_phage(25.0%) integrase,tRNA,plate,transposase,holin,tail attL 2781666:2781681|attR 2803970:2803985
DBSCAN-SWA_18 2842270 : 2907516 56 uncultured_Caudovirales_phage(21.43%) terminase,integrase,tRNA,holin,head,tail attL 2875540:2875558|attR 2907622:2907640
DBSCAN-SWA_19 3071115 : 3109786 48 Salmonella_phage(26.47%) integrase,plate,holin,transposase,capsid,tail attL 3072001:3072027|attR 3109893:3109919
DBSCAN-SWA_20 3387075 : 3398446 14 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_21 3996436 : 4045498 37 Shigella_phage(42.86%) protease,transposase,capsid,head,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage