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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_007779 Escherichia coli str. K-12 substr. W3110, complete genome 5 crisprs WYL,DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK 0 11 8 0

Results visualization

1. NC_007779
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_007779_1 410300-410444 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_007779_2 550589-550685 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_007779_3 2351871-2351997 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_007779_4 2876357-2877119 TypeI-E I-E
12 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_007779_5 2902670-2903063 Unclear I-E
6 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_007779_5 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT 2902942-2902974 33 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3606 4 0.879
NC_007779_5 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT 2902942-2902974 33 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3599 4 0.879
NC_007779_5 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT 2902942-2902974 33 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21075 4 0.879
NC_007779_4 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876630-2876661 32 NC_021229 Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919 65474-65505 5 0.844
NC_007779_4 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876630-2876661 32 NZ_CP017422 Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence 208287-208318 6 0.812
NC_007779_4 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876998-2877029 32 KY883647 Vibrio phage JSF33, complete genome 9760-9791 6 0.812
NC_007779_4 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2877059-2877090 32 NZ_CP009293 Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence 152196-152227 6 0.812
NC_007779_5 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT 2902942-2902974 33 KY653119 Morganella phage IME1369_02, complete genome 18216-18248 6 0.818
NC_007779_4 4.1|2876386|32|NC_007779|CRISPRCasFinder,CRT 2876386-2876417 32 NZ_AP018516 Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence 48296-48327 8 0.75
NC_007779_4 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876630-2876661 32 MK113951 Phage 5P_3, complete genome 11967-11998 8 0.75
NC_007779_4 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876630-2876661 32 AP017924 Ralstonia phage RP12 DNA, complete genome 11643-11674 8 0.75
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NC_013856 Azospirillum sp. B510 plasmid pAB510b, complete sequence 375744-375776 8 0.758
NC_007779_4 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876998-2877029 32 MN855762 Bacteriophage sp. isolate 505, complete genome 4840-4871 8 0.75
NC_007779_4 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876998-2877029 32 NC_020548 Azoarcus sp. KH32C plasmid pAZKH, complete sequence 224460-224491 8 0.75
NC_007779_4 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2877059-2877090 32 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 750410-750441 8 0.75
NC_007779_5 5.4|2902881|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT 2902881-2902913 33 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 755172-755204 8 0.758
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229083-229131 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229184-229232 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229285-229333 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239577-239625 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239678-239726 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239779-239827 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230489-230537 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230590-230638 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230691-230739 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211459-211507 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211560-211608 9 0.816
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211661-211709 9 0.816
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_CP010957 Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence 26182-26214 9 0.727
NC_007779_4 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876998-2877029 32 NZ_CP015585 Roseomonas gilardii strain U14-5 plasmid 1, complete sequence 104261-104292 9 0.719
NC_007779_4 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876998-2877029 32 NZ_CP054618 Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence 142898-142929 9 0.719
NC_007779_4 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2877059-2877090 32 MN234174 Mycobacterium phage Efra2, complete genome 35614-35645 9 0.719
NC_007779_4 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2877059-2877090 32 MN234165 Mycobacterium phage Yunkel11, complete genome 35570-35601 9 0.719
NC_007779_4 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2877059-2877090 32 MN234201 Mycobacterium phage Guanica15, complete genome 35571-35602 9 0.719
NC_007779_1 1.1|410343|59|NC_007779|CRISPRCasFinder 410343-410401 59 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 97-155 10 0.831
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229386-229434 10 0.796
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239880-239928 10 0.796
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230792-230840 10 0.796
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211762-211810 10 0.796
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7442-7490 10 0.796
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84266-84314 10 0.796
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 386508-386556 10 0.796
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14196-14244 10 0.796
NC_007779_4 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876630-2876661 32 NC_002580 Propionibacterium freudenreichii plasmid p545, complete sequence 2898-2929 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NZ_CP028970 Aminobacter sp. MSH1 plasmid pUSP2, complete sequence 156123-156154 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NZ_CP053984 Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence 21888-21919 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NC_010935 Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence 28766-28797 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 JX469826 Uncultured bacterium plasmid pB12, complete sequence 11283-11314 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 JN106171 Uncultured bacterium plasmid pAKD26, complete sequence 11289-11320 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NC_016968 Comamonas testosteroni plasmid pTB30, complete sequence 11287-11318 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NC_016978 Comamonas testosteroni plasmid pI2, complete sequence 11272-11303 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NZ_CP017760 Cupriavidus necator strain NH9 plasmid pENH91, complete sequence 67078-67109 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NZ_CP053554 Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence 4235-4266 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NC_019263 Delftia acidovorans plasmid pLME1, complete sequence 11288-11319 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NC_019264 Delftia acidovorans plasmid pNB8c, complete sequence 11288-11319 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NC_019283 Delftia acidovorans plasmid pC1-1, complete sequence 11288-11319 10 0.688
NC_007779_4 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876691-2876722 32 NC_006830 Achromobacter xylosoxidans A8 plasmid pA81, complete sequence 11350-11381 10 0.688
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 CP046443 Pseudomonas coronafaciens pv. coronafaciens strain B19001 plasmid unnamed2, complete sequence 31933-31965 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_LT963392 Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence 103013-103045 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_LT963392 Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence 110510-110542 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_CP034079 Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-1, complete sequence 48454-48486 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_CP034080 Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-2, complete sequence 39480-39512 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NC_005918 Pseudomonas syringae pv. maculicola strain ES4326 plasmid pPMA4326A, complete sequence 31117-31149 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_CP047262 Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326A, complete sequence 30966-30998 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_CP026560 Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p3_tig5, complete sequence 19118-19150 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_LT963406 Pseudomonas syringae pv. avii isolate CFBP3846 plasmid PP4, complete sequence 54820-54852 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 LT985193 Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP2 32077-32109 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_LT963393 Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP2, complete sequence 50597-50629 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_LT985210 Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP1, complete sequence 105842-105874 10 0.697
NC_007779_4 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876813-2876845 33 NZ_LT985211 Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP2, complete sequence 84272-84304 10 0.697
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052797 Salmonella enterica subsp. enterica serovar Infantis strain CVM N18S2039 plasmid pN18S2039, complete sequence 45808-45839 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052795 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence 282589-282620 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP047882 Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence 94965-94996 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052804 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence 304288-304319 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP038508 Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence 112376-112407 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052802 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence 315682-315713 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052788 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence 203378-203409 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052840 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence 127648-127679 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052786 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence 215302-215333 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052838 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence 214483-214514 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP028316 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 plasmid pSC-31-2, complete sequence 108893-108924 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP051676 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence 83669-83700 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052783 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0679 plasmid pN19S0679-1, complete sequence 194119-194150 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052836 Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence 18410-18441 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP022063 Salmonella enterica strain FDAARGOS_312 plasmid unnamed3, complete sequence 64615-64646 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052781 Salmonella enterica strain CVM N19S0949 plasmid pN19S0949, complete sequence 169480-169511 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052834 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S041 plasmid pN17S0041, complete sequence 6457-6488 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052793 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0388 plasmid pN19S0388, complete sequence 25758-25789 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052779 Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence 140403-140434 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052832 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence 160727-160758 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP031362 Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p3, complete sequence 140152-140183 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052830 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1105 plasmid pN17S1105, complete sequence 193709-193740 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052828 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence 126974-127005 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052826 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence 110984-111015 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP016409 Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence 94916-94947 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052824 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1265 plasmid pN17S1265, complete sequence 91497-91528 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052822 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1349 plasmid pN17S1349, complete sequence 110984-111015 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP016407 Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence 94916-94947 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052820 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1442 plasmid pN17S1442, complete sequence 94916-94947 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP016413 Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence 94916-94947 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP016411 Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence 94916-94947 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052816 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1598 plasmid pN17S1598 165317-165348 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052814 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence 99109-99140 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP022662 Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-2, complete sequence 54379-54410 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052812 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S376 plasmid pN17S0376, complete sequence 1671-1702 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052810 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S535 plasmid pN17S0535, complete sequence 212751-212782 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052808 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S637 plasmid pN17S0637, complete sequence 306376-306407 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052806 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence 164579-164610 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052791 Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN17S0637, complete sequence 168074-168105 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052818 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence 190524-190555 10 0.688
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 CP052799 Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-1, complete sequence 6457-6488 10 0.688
NC_007779_1 1.1|410343|59|NC_007779|CRISPRCasFinder 410343-410401 59 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40375-40433 11 0.814
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194003-194051 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194096-194144 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194282-194330 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204497-204545 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204590-204638 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204776-204824 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195331-195379 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195424-195472 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195610-195658 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176286-176334 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176379-176427 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176565-176613 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27282-27330 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27381-27429 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 51834-51882 11 0.776
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 19389-19437 11 0.776
NC_007779_4 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR 2876937-2876968 32 NZ_CP026128 Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence 49165-49196 11 0.656
NC_007779_5 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT 2902942-2902974 33 MF158039 Shigella phage Sf12, complete genome 4974-5006 11 0.667
NC_007779_5 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT 2902942-2902974 33 MF158042 Shigella phage Sd1, complete genome 937-969 11 0.667
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 211730-211778 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 211930-211978 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194189-194237 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 222224-222272 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 222424-222472 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204683-204731 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 213058-213106 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 213258-213306 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195517-195565 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 194013-194061 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 194213-194261 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176472-176520 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 11511-11559 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 397088-397136 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 404133-404181 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 27994-28042 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31299-31347 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 33059-33107 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 141016-141064 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 MF374379 Escherichia phage DN1, complete genome 31158-31206 12 0.755
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14105-14153 13 0.735
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 6859-6907 13 0.735
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NC_049343 Escherichia phage 500465-2, complete genome 31797-31845 13 0.735
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 MT230112 Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence 94-142 13 0.735
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 82842-82890 14 0.714
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 313592-313640 14 0.714
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 63889-63937 14 0.714
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 110186-110234 14 0.714
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 198909-198957 14 0.714
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 40305-40353 14 0.714
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 91418-91466 14 0.714
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 102544-102592 15 0.694
NC_007779_3 3.1|2351910|49|NC_007779|CRISPRCasFinder 2351910-2351958 49 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56031-56079 15 0.694

1. spacer 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879 

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

2. spacer 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879 

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

3. spacer 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879 

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

4. spacer 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 5, identity: 0.844 

tgggcggcttgccttgcagccagctccagcag-	CRISPR spacer
tgggcggcttgcgttgcagcctgc-cgagcgga	Protospacer
************ ******** ** * ***.*

5. spacer 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 6, identity: 0.812 

tgggcggcttgccttgcagccagctccagcag-	CRISPR spacer
ggggcggcttgcgttgcagcctgc-cgagcgga	Protospacer
 *********** ******** ** * ***.*

6. spacer 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to KY883647 (Vibrio phage JSF33, complete genome) position: , mismatch: 6, identity: 0.812 

agcgtgttcggcatcacctttggcttcggctg	CRISPR spacer
agcagtttcggcatcagctttggctttggctt	Protospacer
***.  ********** *********.****

7. spacer 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 6, identity: 0.812 

tgcgtgagcgtatcgccgcgcgtctgcgaaag	CRISPR spacer
agaatgagcgtgtcgccgcgcgtctgcgtgag	Protospacer
 * .*******.**************** .**

8. spacer 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818 

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtcagcgttaacgccgcacaacct	Protospacer
*********** ********.****** *  *

9. spacer 4.1|2876386|32|NC_007779|CRISPRCasFinder,CRT matches to NZ_AP018516 (Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence) position: , mismatch: 8, identity: 0.75 

cagcgtcaggcgtgaaatctcaccgtcgttgc	CRISPR spacer
attctttaggcgtgacatcttaccgtcgttga	Protospacer
   * *.******** ****.**********

10. spacer 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to MK113951 (Phage 5P_3, complete genome) position: , mismatch: 8, identity: 0.75 

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
ggggcagcttgccttgcagccagccgatgctc	Protospacer
 ****.******************.   **

11. spacer 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to AP017924 (Ralstonia phage RP12 DNA, complete genome) position: , mismatch: 8, identity: 0.75 

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
tgggccgcttgccgtgcagccagcgcttccgc	Protospacer
***** ******* ********** *.  *.

12. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 8, identity: 0.758 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
cgcgtcggcgacgcgcaggtaatgcgcgatcag	Protospacer
   * **************  *********. *

13. spacer 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to MN855762 (Bacteriophage sp. isolate 505, complete genome) position: , mismatch: 8, identity: 0.75 

agcgtgttcggcatcacctttggcttcggctg	CRISPR spacer
gaccagctcgaaatcacctttggcttcggctt	Protospacer
..*  *.***. *******************

14. spacer 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 8, identity: 0.75 

agcgtgtt---cggcatcacctttggcttcggctg	CRISPR spacer
---ctgctcgccggcatcaccttcggcttctgcta	Protospacer
    **.*   ************.****** ***.

15. spacer 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75 

tgcgtgagcgtatcgccgcgcgtctgcgaaag-	CRISPR spacer
agcgagagcgtatcgccgcgc-ttcgtgaagcc	Protospacer
 *** **************** *..*.***.

16. spacer 5.4|2902881|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758 

tggctctgcaacagcagcacccatgaccacgtc	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgga	Protospacer
.* ..* ****************.*******

17. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

18. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

19. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

20. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

21. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

22. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

23. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

24. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

25. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

26. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

27. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

28. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

29. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 9, identity: 0.727 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
cgaggcggcgacacgcaaggtatgcgggtcgag	Protospacer
  **********.****.******** * .  *

30. spacer 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015585 (Roseomonas gilardii strain U14-5 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719 

agcgtgttcggcatcacctttggcttcggctg	CRISPR spacer
atccgcacgggcatcacctttggctccagctg	Protospacer
* *    . ****************.*.****

31. spacer 4.11|2876998|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719 

agcgtgttcggcatcacctttggcttcggctg	CRISPR spacer
ctcggcctcggcaacacctttgccttcggcgc	Protospacer
  **  .****** ******** *******

32. spacer 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to MN234174 (Mycobacterium phage Efra2, complete genome) position: , mismatch: 9, identity: 0.719 

tgcgtgagcgtatcgccgcgcgtctgcgaaag	CRISPR spacer
gccgtgagcgtgacgccgcgcgtctggtgatc	Protospacer
  *********. *************  .*

33. spacer 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to MN234165 (Mycobacterium phage Yunkel11, complete genome) position: , mismatch: 9, identity: 0.719 

tgcgtgagcgtatcgccgcgcgtctgcgaaag	CRISPR spacer
gccgtgagcgtgacgccgcgcgtctggtgatc	Protospacer
  *********. *************  .*

34. spacer 4.12|2877059|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to MN234201 (Mycobacterium phage Guanica15, complete genome) position: , mismatch: 9, identity: 0.719 

tgcgtgagcgtatcgccgcgcgtctgcgaaag	CRISPR spacer
gccgtgagcgtgacgccgcgcgtctggtgatc	Protospacer
  *********. *************  .*

35. spacer 1.1|410343|59|NC_007779|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831 

ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg-	CRISPR spacer
gagcacagaaccgtaggacggataaggcgttcacgccgcatccggcgat-cgtgcactga	Protospacer
*.   ************ ****************************.**  **** *.*

36. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

37. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

38. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

39. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

40. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

41. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

42. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

43. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

44. spacer 4.5|2876630|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_002580 (Propionibacterium freudenreichii plasmid p545, complete sequence) position: , mismatch: 10, identity: 0.688 

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
ccagcggcttgcgtggcagccagctctcaggg	Protospacer
. .********* * ***********. . .*

45. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
gcgtgtgctggcaatcgcttccggggtgacgt	Protospacer
. *.  ********** ***.********  .

46. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

47. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

48. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to JX469826 (Uncultured bacterium plasmid pB12, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

49. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to JN106171 (Uncultured bacterium plasmid pAKD26, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

50. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_016968 (Comamonas testosteroni plasmid pTB30, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

51. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

52. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017760 (Cupriavidus necator strain NH9 plasmid pENH91, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

53. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053554 (Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

54. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_019263 (Delftia acidovorans plasmid pLME1, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

55. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_019264 (Delftia acidovorans plasmid pNB8c, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

56. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_019283 (Delftia acidovorans plasmid pC1-1, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

57. spacer 4.6|2876691|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_006830 (Achromobacter xylosoxidans A8 plasmid pA81, complete sequence) position: , mismatch: 10, identity: 0.688 

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

58. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP046443 (Pseudomonas coronafaciens pv. coronafaciens strain B19001 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

59. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963392 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

60. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963392 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

61. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034079 (Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-1, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

62. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034080 (Pseudomonas syringae pv. pisi str. PP1 plasmid pPP1-2, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

63. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NC_005918 (Pseudomonas syringae pv. maculicola strain ES4326 plasmid pPMA4326A, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

64. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047262 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326A, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

65. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026560 (Pseudomonas amygdali pv. morsprunorum strain R15244 plasmid p3_tig5, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

66. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963406 (Pseudomonas syringae pv. avii isolate CFBP3846 plasmid PP4, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

67. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to LT985193 (Pseudomonas syringae strain CFBP 2116 genome assembly, plasmid: PP2) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

68. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT963393 (Pseudomonas syringae pv. cerasicola isolate CFBP6109 plasmid PP2, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

69. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985210 (Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP1, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

70. spacer 4.8|2876813|33|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985211 (Pseudomonas syringae pv. cerasicola strain CFBP 6110 plasmid PP2, complete sequence) position: , mismatch: 10, identity: 0.697 

gcaggcggcgacgcgcagggtatgcgcgattcg	CRISPR spacer
accggcggcgacgcgcaggagatgcgcagcgaa	Protospacer
.* ****************. ******...  .

71. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052797 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N18S2039 plasmid pN18S2039, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

72. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

73. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

74. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

75. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

76. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

77. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

78. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

79. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

80. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

81. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028316 (Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067217 plasmid pSC-31-2, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

82. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

83. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052783 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0679 plasmid pN19S0679-1, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

84. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

85. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022063 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

86. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052781 (Salmonella enterica strain CVM N19S0949 plasmid pN19S0949, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

87. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052834 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S041 plasmid pN17S0041, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

88. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052793 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0388 plasmid pN19S0388, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

89. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

90. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

91. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031362 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

92. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052830 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1105 plasmid pN17S1105, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

93. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

94. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

95. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

96. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052824 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1265 plasmid pN17S1265, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

97. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052822 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1349 plasmid pN17S1349, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

98. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

99. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052820 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1442 plasmid pN17S1442, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

100. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

101. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

102. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052816 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1598 plasmid pN17S1598) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

103. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

104. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022662 (Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-2, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

105. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052812 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S376 plasmid pN17S0376, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

106. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052810 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S535 plasmid pN17S0535, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

107. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052808 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S637 plasmid pN17S0637, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

108. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

109. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052791 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN17S0637, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

110. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

111. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to CP052799 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-1, complete sequence) position: , mismatch: 10, identity: 0.688 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gaggcgctatcaaacacaaccgacagggagta	Protospacer
  ..*..****** .***************.

112. spacer 1.1|410343|59|NC_007779|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814 

-ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg	CRISPR spacer
tcgcacca-aaccgtaggccggataaggcgtttacgccgcatccggcaaaaagccgtacc	Protospacer
  *..*** ***********************.**************** ***.  * *

113. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

114. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

115. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

116. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

117. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

118. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

119. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

120. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

121. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

122. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

123. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

124. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

125. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

126. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

127. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

128. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

129. spacer 4.10|2876937|32|NC_007779|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 11, identity: 0.656 

tcaacattatcaattacaaccgacagggagcc	CRISPR spacer
gatacattgccaattacaaccgacagttcaaa	Protospacer
   *****..****************   .

130. spacer 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667 

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

131. spacer 5.5|2902942|33|NC_007779|PILER-CR,CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667 

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

132. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

133. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

134. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

135. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

136. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

137. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

138. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

139. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

140. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

141. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

142. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

143. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

144. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

145. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

146. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

147. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

148. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

149. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

150. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

151. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

152. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

153. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

154. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

155. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

156. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

157. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

158. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

159. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

160. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

161. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

162. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

163. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

164. spacer 3.1|2351910|49|NC_007779|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694 

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 269826 : 326471 47 Acinetobacter_phage(25.0%) transposase,integrase,holin attL 272603:272618|attR 332343:332358
DBSCAN-SWA_2 518362 : 580602 65 Enterobacteria_phage(46.43%) integrase,transposase,protease,lysis,tRNA attL 563978:564024|attR 585280:585326
DBSCAN-SWA_3 1194243 : 1215636 33 Shigella_phage(25.0%) tail,integrase,portal,tRNA,plate attL 1186238:1186252|attR 1222339:1222353
DBSCAN-SWA_4 1397789 : 1438607 45 Escherichia_phage(45.16%) integrase,tail,transposase,lysis,tRNA attL 1398936:1398954|attR 1429311:1429329
DBSCAN-SWA_5 1631166 : 1650377 34 Enterobacteria_phage(40.91%) tail,lysis NA
DBSCAN-SWA_6 2109362 : 2118033 8 Escherichia_phage(28.57%) NA NA
DBSCAN-SWA_7 2470746 : 2481956 16 Enterobacteria_phage(53.33%) tail,integrase attL 2468721:2468737|attR 2485631:2485647
DBSCAN-SWA_8 2855748 : 2862887 6 Escherichia_phage(83.33%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage