| NC_010617.1|WP_167528094.1|723273_723750_+|ribosomal-protein-S18-alanine-N-acetyltransferase |
gnl|CDD|273701 |
TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].
|
8.07927e-27 |
| NC_010617.1|WP_012397723.1|699631_700588_-|type-I-pantothenate-kinase |
gnl|CDD|235466 |
PRK05439, PRK05439, pantothenate kinase; Provisional.
|
0 |
| NC_010617.1|WP_012397725.1|702742_703114_+|holo-ACP-synthase |
gnl|CDD|234610 |
PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.
|
4.91798e-51 |
| NC_010617.1|WP_012397733.1|715456_716254_-|phosphatase |
gnl|CDD|374030 |
pfam15698, Phosphatase, Phosphatase. Members of this family have phosphatase activity.
|
2.15229e-125 |
| NC_010617.1|WP_012397727.1|705137_707315_+|glycogen-debranching-protein-GlgX |
gnl|CDD|131155 |
TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].
|
0 |
| NC_010617.1|WP_105590541.1|720903_722424_+|MFS-transporter |
gnl|CDD|129794 |
TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].
|
8.61746e-16 |
| NC_010617.1|WP_012397734.1|716264_717605_-|glycosyltransferase |
gnl|CDD|340830 |
cd03800, GT4_sucrose_synthase, sucrose-phosphate synthase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
|
8.76351e-104 |
| NC_010617.1|WP_012397722.1|699089_699524_-|large-conductance-mechanosensitive-channel-protein-MscL |
gnl|CDD|376605 |
pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.
|
2.16917e-45 |
| NC_010617.1|WP_041297519.1|717881_719810_+|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE |
gnl|CDD|143481 |
cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.
|
1.67513e-141 |
| NC_010617.1|WP_041297300.1|696576_697617_+|polyphosphate-kinase-2 |
gnl|CDD|213852 |
TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].
|
1.15662e-156 |
| NC_010617.1|WP_012397721.1|697665_699021_+|phosphoglucosamine-mutase |
gnl|CDD|237672 |
PRK14318, glmM, phosphoglucosamine mutase; Provisional.
|
0 |
| NC_010617.1|WP_041297301.1|722512_723196_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB |
gnl|CDD|274750 |
TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].
|
5.45671e-53 |
| NC_010617.1|WP_012397729.1|709847_711668_+|malto-oligosyltrehalose-trehalohydrolase |
gnl|CDD|274114 |
TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. [Energy metabolism, Biosynthesis and degradation of polysaccharides].
|
0 |
| NC_010617.1|WP_012397719.1|695720_696224_+|30S-ribosomal-protein-S9 |
gnl|CDD|178888 |
PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.
|
4.85797e-77 |
| NC_010617.1|WP_012397724.1|700661_702545_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing) |
gnl|CDD|234729 |
PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.
|
0 |
| NC_010617.1|WP_081431581.1|720076_720907_+|purine-nucleoside-phosphorylase |
gnl|CDD|350157 |
cd09006, PNP_EcPNPI-like, purine nucleoside phosphorylases similar to Escherichia coli PNP-I (DeoD) and Trichomonas vaginalis PNP. Escherichia coli purine nucleoside phosphorylase (PNP)-I (or DeoD) accepts both 6-oxo and 6-amino purine nucleosides as substrates. Trichomonas vaginalis PNP has broad substrate specificity, having phosphorolytic catalytic activity with adenosine, inosine, and guanosine (with adenosine as the preferred substrate). This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.
|
8.5584e-134 |
| NC_010617.1|WP_012397728.1|707474_709844_+|malto-oligosyltrehalose-synthase |
gnl|CDD|237740 |
PRK14511, PRK14511, malto-oligosyltrehalose synthase.
|
0 |
| NC_010617.1|WP_012397732.1|714268_715354_+|inositol-3-phosphate-synthase |
gnl|CDD|132491 |
TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.
|
0 |
| NC_010617.1|WP_012397731.1|713148_714018_+|LysE-family-transporter |
gnl|CDD|224199 |
COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].
|
1.05357e-10 |
| NC_010617.1|WP_012397730.1|712060_713152_+|L-glyceraldehyde-3-phosphate-reductase |
gnl|CDD|381376 |
cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.
|
0 |
