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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_010804 Burkholderia multivorans ATCC 17616 chromosome 1, complete sequence 1 crisprs cas3,DEDDh,PD-DExK,csa3,DinG 4 3 5 2
NC_010805 Burkholderia multivorans ATCC 17616 chromosome 2, complete sequence 1 crisprs cas3,RT,csa3,DinG 0 0 4 3
NC_010802 Burkholderia multivorans ATCC 17616 plasmid pTGL1, complete sequence 0 crisprs csa3 0 0 1 0
NC_010801 Burkholderia multivorans ATCC 17616 chromosome 3, complete sequence 0 crisprs PD-DExK,csa3 0 0 4 0

Results visualization

1. NC_010805
NC_010805 04000008000001200000160000020000002400000 CRISPR 1 Self-targeting Prophage 1 2 3 4 anti-CRISPR 1 2 3
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010805_1 2435544-2435644 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 479636 : 545416 74 Burkholderia_phage(86.54%) tail,terminase,portal,tRNA,holin,plate,transposase,capsid,head NA
DBSCAN-SWA_2 555585 : 625650 57 Acidithiobacillus_phage(18.18%) transposase,integrase attL 579702:579761|attR 623735:625602
DBSCAN-SWA_3 1557955 : 1608438 36 Bacillus_phage(28.57%) transposase,plate NA
DBSCAN-SWA_4 1620567 : 1665257 66 Burkholderia_phage(98.44%) tail,portal,terminase,holin,protease,capsid,head NA
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Click the colored protein region to show detailed information
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_010805.1|WP_012216698.1|1648171_1648642_-|hypothetical-protein 1648171_1648642_- 156 aa aa NA NA NA 1620567-1665257 yes
NC_010805.1|WP_012467977.1|1649201_1649378_-|hypothetical-protein 1649201_1649378_- 58 aa aa NA NA NA 1620567-1665257 yes
NC_010805.1|WP_012467981.1|1652245_1652587_+|hypothetical-protein 1652245_1652587_+ 113 aa aa NA NA NA 1620567-1665257 yes
2. NC_010804
NC_010804 0400000800000120000016000002000000240000028000003200000 CRISPR 1 Self-targeting Prophage 1 2 3 4 5 anti-CRISPR 1 2
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010804_1 1503851-1504132 Orphan NA
6 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_010804_1 1.2|1503929|18|NC_010804|CRT 1503929-1503946 18 NC_010804.1 1504121-1504138 0 1.0
NC_010804_1 1.4|1504013|18|NC_010804|CRT 1504013-1504030 18 NC_010805.1 1659011-1659028 0 1.0
NC_010804_1 1.4|1504013|18|NC_010804|CRT 1504013-1504030 18 NC_010805.1 1659044-1659061 0 1.0
NC_010804_1 1.6|1504097|18|NC_010804|CRT 1504097-1504114 18 NC_010805.1 1658858-1658875 0 1.0
NC_010804_1 1.2|1503929|18|NC_010804|CRT 1503929-1503946 18 NC_010804.1 1503845-1503862 1 0.944
NC_010804_1 1.2|1503929|18|NC_010804|CRT 1503929-1503946 18 NC_010804.1 3031493-3031510 1 0.944
NC_010804_1 1.4|1504013|18|NC_010804|CRT 1504013-1504030 18 NC_010805.1 1658879-1658896 1 0.944
NC_010804_1 1.4|1504013|18|NC_010804|CRT 1504013-1504030 18 NC_010805.1 1658891-1658908 1 0.944
NC_010804_1 1.4|1504013|18|NC_010804|CRT 1504013-1504030 18 NC_010805.1 1658945-1658962 1 0.944
NC_010804_1 1.4|1504013|18|NC_010804|CRT 1504013-1504030 18 NC_010805.1 1658957-1658974 1 0.944
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_010804.1 1503845-1503874 1 0.967
NC_010804_1 1.6|1504097|18|NC_010804|CRT 1504097-1504114 18 NC_010804.1 1503845-1503862 1 0.944
NC_010804_1 1.6|1504097|18|NC_010804|CRT 1504097-1504114 18 NC_010804.1 3031493-3031510 1 0.944
NC_010804_1 1.6|1504097|18|NC_010804|CRT 1504097-1504114 18 NC_010805.1 1658924-1658941 1 0.944
NC_010804_1 1.6|1504097|18|NC_010804|CRT 1504097-1504114 18 NC_010805.1 1659137-1659154 1 0.944
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_010805.1 1658912-1658941 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_010805.1 1659125-1659154 2 0.933

1. spacer 1.2|1503929|18|NC_010804|CRT matches to position: 1504121-1504138, mismatch: 0, identity: 1.0

gtgcggcgtcccgtgcgg	CRISPR spacer
gtgcggcgtcccgtgcgg	Protospacer
******************

2. spacer 1.4|1504013|18|NC_010804|CRT matches to position: 1659011-1659028, mismatch: 0, identity: 1.0

ctgcggcgtcccgtgcgg	CRISPR spacer
ctgcggcgtcccgtgcgg	Protospacer
******************

3. spacer 1.4|1504013|18|NC_010804|CRT matches to position: 1659044-1659061, mismatch: 0, identity: 1.0

ctgcggcgtcccgtgcgg	CRISPR spacer
ctgcggcgtcccgtgcgg	Protospacer
******************

4. spacer 1.6|1504097|18|NC_010804|CRT matches to position: 1658858-1658875, mismatch: 0, identity: 1.0

gtgcggcggcccatgcgg	CRISPR spacer
gtgcggcggcccatgcgg	Protospacer
******************

5. spacer 1.2|1503929|18|NC_010804|CRT matches to position: 1503845-1503862, mismatch: 1, identity: 0.944

gtgcggcgtcccgtgcgg	CRISPR spacer
gtgcggcgtcccatgcgg	Protospacer
************.*****

6. spacer 1.2|1503929|18|NC_010804|CRT matches to position: 3031493-3031510, mismatch: 1, identity: 0.944

gtgcggcgtcccgtgcgg	CRISPR spacer
gtgcggcggcccgtgcgg	Protospacer
******** *********

7. spacer 1.4|1504013|18|NC_010804|CRT matches to position: 1658879-1658896, mismatch: 1, identity: 0.944

ctgcggcgtcccgtgcgg	CRISPR spacer
ctgcggcgtcccctgcgg	Protospacer
************ *****

8. spacer 1.4|1504013|18|NC_010804|CRT matches to position: 1658891-1658908, mismatch: 1, identity: 0.944

ctgcggcgtcccgtgcgg	CRISPR spacer
ctgcggcgtcccctgcgg	Protospacer
************ *****

9. spacer 1.4|1504013|18|NC_010804|CRT matches to position: 1658945-1658962, mismatch: 1, identity: 0.944

ctgcggcgtcccgtgcgg	CRISPR spacer
ctgcggcgtcccctgcgg	Protospacer
************ *****

10. spacer 1.4|1504013|18|NC_010804|CRT matches to position: 1658957-1658974, mismatch: 1, identity: 0.944

ctgcggcgtcccgtgcgg	CRISPR spacer
ctgcggcgtcccctgcgg	Protospacer
************ *****

11. spacer 1.5|1504049|30|NC_010804|CRT matches to position: 1503845-1503874, mismatch: 1, identity: 0.967

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcgtcccatgcggcgtcccatgcgg	Protospacer
******** *********************

12. spacer 1.6|1504097|18|NC_010804|CRT matches to position: 1503845-1503862, mismatch: 1, identity: 0.944

gtgcggcggcccatgcgg	CRISPR spacer
gtgcggcgtcccatgcgg	Protospacer
******** *********

13. spacer 1.6|1504097|18|NC_010804|CRT matches to position: 3031493-3031510, mismatch: 1, identity: 0.944

gtgcggcggcccatgcgg	CRISPR spacer
gtgcggcggcccgtgcgg	Protospacer
************.*****

14. spacer 1.6|1504097|18|NC_010804|CRT matches to position: 1658924-1658941, mismatch: 1, identity: 0.944

gtgcggcggcccatgcgg	CRISPR spacer
gtgcggcgacccatgcgg	Protospacer
********.*********

15. spacer 1.6|1504097|18|NC_010804|CRT matches to position: 1659137-1659154, mismatch: 1, identity: 0.944

gtgcggcggcccatgcgg	CRISPR spacer
gtgcggcggcccctgcgg	Protospacer
************ *****

16. spacer 1.5|1504049|30|NC_010804|CRT matches to position: 1658912-1658941, mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcgacccatgcggcgtcccgtgcgg	Protospacer
********.***************.*****

17. spacer 1.5|1504049|30|NC_010804|CRT matches to position: 1659125-1659154, mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcggcccctgcggcgacccatgcgg	Protospacer
************ ******* *********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13671-13700 2 0.933
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13737-13766 2 0.933
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13905-13934 2 0.933
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13671-13700 2 0.933
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13737-13766 2 0.933
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13905-13934 2 0.933
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_023549 Clavibacter phage CN1A, complete genome 5371-5400 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13881-13910 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13704-13733 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13917-13946 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13881-13910 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13704-13733 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13917-13946 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_023549 Clavibacter phage CN1A, complete genome 5383-5412 2 0.933
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_023549 Clavibacter phage CN1A, complete genome 5419-5448 2 0.933
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 NC_023549 Clavibacter phage CN1A, complete genome 5371-5412 3 0.929
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13704-13733 3 0.9
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13770-13799 3 0.9
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13881-13910 3 0.9
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13704-13733 3 0.9
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13770-13799 3 0.9
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13881-13910 3 0.9
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_023549 Clavibacter phage CN1A, complete genome 5383-5412 3 0.9
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_023549 Clavibacter phage CN1A, complete genome 5419-5448 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13770-13799 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13803-13832 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13836-13865 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13905-13934 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13770-13799 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13803-13832 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13836-13865 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13905-13934 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_023549 Clavibacter phage CN1A, complete genome 5491-5520 3 0.9
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_013936 Mycobacterium phage Ardmore, complete genome 36522-36551 3 0.9
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_013936 Mycobacterium phage Ardmore, complete genome 36522-36551 4 0.867
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13692-13733 5 0.881
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13758-13799 5 0.881
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 NC_007497 Burkholderia phage Bcep176, complete genome 13692-13733 5 0.881
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 NC_007497 Burkholderia phage Bcep176, complete genome 13758-13799 5 0.881
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13683-13712 5 0.833
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13749-13778 5 0.833
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13815-13844 5 0.833
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13860-13889 5 0.833
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13683-13712 5 0.833
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13749-13778 5 0.833
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13815-13844 5 0.833
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13860-13889 5 0.833
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 KR011061 Skermania phage SPI1, complete genome 42348-42377 5 0.833
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_010494 Arthrobacter sp. AK-1 plasmid pSI-1, complete sequence 433-462 5 0.833
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13869-13910 6 0.857
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 NC_007497 Burkholderia phage Bcep176, complete genome 13869-13910 6 0.857
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13929-13958 6 0.8
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13929-13958 6 0.8
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13638-13667 6 0.8
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13650-13679 6 0.8
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13716-13745 6 0.8
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13638-13667 6 0.8
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13650-13679 6 0.8
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13716-13745 6 0.8
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1684347-1684376 6 0.8
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 128916-128945 6 0.8
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 KR011061 Skermania phage SPI1, complete genome 42360-42389 7 0.767
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NZ_CP035710 Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence 20444-20473 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13683-13712 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13749-13778 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13782-13811 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13815-13844 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13860-13889 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13683-13712 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13749-13778 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13782-13811 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13815-13844 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_007497 Burkholderia phage Bcep176, complete genome 13860-13889 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NZ_CP017077 Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence 461257-461286 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 641357-641386 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_020910 Octadecabacter arcticus 238 plasmid pOA238_160, complete sequence 155452-155481 7 0.767
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 KC292028 Halovirus HCTV-2, complete genome 25284-25313 7 0.767
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13791-13832 8 0.81
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 NC_007497 Burkholderia phage Bcep176, complete genome 13791-13832 8 0.81
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13638-13667 8 0.733
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 NC_007497 Burkholderia phage Bcep176, complete genome 13638-13667 8 0.733
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 MF580956 Salinibacter virus M8CC-19, complete genome 49912-49941 8 0.733
NC_010804_1 1.3|1503965|30|NC_010804|CRT 1503965-1503994 30 MF580960 Salinibacter virus M31CC-1, partial genome 49909-49938 8 0.733
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NC_023549 Clavibacter phage CN1A, complete genome 5323-5352 8 0.733
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NZ_CP012267 Cronobacter dublinensis subsp. dublinensis LMG 23823 plasmid pCDU1, complete sequence 7458-7487 8 0.733
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13659-13700 9 0.786
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13824-13865 9 0.786
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 NC_007497 Burkholderia phage Bcep176, complete genome 13659-13700 9 0.786
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 NC_007497 Burkholderia phage Bcep176, complete genome 13824-13865 9 0.786
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NZ_CP017759 Cupriavidus necator strain NH9 plasmid pENH92, complete sequence 346823-346852 9 0.7
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 DQ203855 Burkholderia cepacia phage Bcep176, complete genome 13725-13766 10 0.762
NC_010804_1 1.1|1503869|42|NC_010804|CRT 1503869-1503910 42 NC_007497 Burkholderia phage Bcep176, complete genome 13725-13766 10 0.762
NC_010804_1 1.5|1504049|30|NC_010804|CRT 1504049-1504078 30 NZ_CP021369 Acidovorax carolinensis strain P4 plasmid pACP4.3, complete sequence 100228-100257 10 0.667

1. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccctgcggcgtcccctgcgg	Protospacer
 *********** *****************

2. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccctgcggcgtcccctgcgg	Protospacer
 *********** *****************

3. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgacccatgcggcgtcccctgcgg	Protospacer
 ******* *********************

4. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccctgcggcgtcccctgcgg	Protospacer
 *********** *****************

5. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccctgcggcgtcccctgcgg	Protospacer
 *********** *****************

6. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgacccatgcggcgtcccctgcgg	Protospacer
 ******* *********************

7. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 2, identity: 0.933

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
atgcggcgtcccgtgcggcgtcccgtgcgg	Protospacer
************.*********** *****

8. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
ctgcggcggcccatgcggcgtcccgtgcgg	Protospacer
 ***********************.*****

9. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcgacccatgcggcgtcccgtgcgg	Protospacer
********.***************.*****

10. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcggcccctgcggcgacccatgcgg	Protospacer
************ ******* *********

11. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
ctgcggcggcccatgcggcgtcccgtgcgg	Protospacer
 ***********************.*****

12. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcgacccatgcggcgtcccgtgcgg	Protospacer
********.***************.*****

13. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcggcccctgcggcgacccatgcgg	Protospacer
************ ******* *********

14. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcgccccatgcggcgtcccgtgcgg	Protospacer
******** ***************.*****

15. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 2, identity: 0.933

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtacggcgtcccatgcggcgtcccatgcgg	Protospacer
**.***** *********************

16. spacer 1.1|1503869|42|NC_010804|CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 3, identity: 0.929

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
gtgcggcgccccatgcggcgtcccgtgcggcgtcccgtgcgg	Protospacer
.*******.*************************** *****

17. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
gtgcggcgacccatgcggcgtcccgtgcgg	Protospacer
.******* *************** *****

18. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgacccatgcggcgtcccgtgcgg	Protospacer
 ******* *************** *****

19. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcggcccatgcggcgtcccgtgcgg	Protospacer
 ******* *************** *****

20. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
gtgcggcgacccatgcggcgtcccgtgcgg	Protospacer
.******* *************** *****

21. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgacccatgcggcgtcccgtgcgg	Protospacer
 ******* *************** *****

22. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcggcccatgcggcgtcccgtgcgg	Protospacer
 ******* *************** *****

23. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 3, identity: 0.9

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
gtgcggcgccccatgcggcgtcccgtgcgg	Protospacer
.*******.*************** *****

24. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 3, identity: 0.9

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
gtacggcgtcccatgcggcgtcccatgcgg	Protospacer
.*.********************* *****

25. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
ctgcggcgacccatgcggcgtcccgtgcgg	Protospacer
 *******.***************.*****

26. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
atgcggcggcccctgcggcgtcccgtgcgg	Protospacer
.*********** ***********.*****

27. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
ctgcggcggcccctgcggcgtcccgtgcgg	Protospacer
 *********** ***********.*****

28. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
ctgcggcgacccatgcggcgtcccctgcgg	Protospacer
 *******.*************** *****

29. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
ctgcggcgacccatgcggcgtcccgtgcgg	Protospacer
 *******.***************.*****

30. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
atgcggcggcccctgcggcgtcccgtgcgg	Protospacer
.*********** ***********.*****

31. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
ctgcggcggcccctgcggcgtcccgtgcgg	Protospacer
 *********** ***********.*****

32. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
ctgcggcgacccatgcggcgtcccctgcgg	Protospacer
 *******.*************** *****

33. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtacgacggcccatgcggcgtcccatgcgt	Protospacer
**.**.*********************** 

34. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_013936 (Mycobacterium phage Ardmore, complete genome) position: , mismatch: 3, identity: 0.9

gtgcggcggcccatgcggcgtcccatgcgg-	CRISPR spacer
gtgcggcgctccatgcggcgtccc-tgcggc	Protospacer
******** .************** ***** 

35. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_013936 (Mycobacterium phage Ardmore, complete genome) position: , mismatch: 4, identity: 0.867

atgcggcgtcccatgcggcgtcccctgcgg-	CRISPR spacer
gtgcggcgctccatgcggcgt-ccctgcggc	Protospacer
.*******..*********** ******** 

36. spacer 1.1|1503869|42|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.881

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg---	CRISPR spacer
gtgcggcgacccatgcggcgtcccgtgcgg---cccctgcggcgt	Protospacer
.******* *********************   *********   

37. spacer 1.1|1503869|42|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.881

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg---	CRISPR spacer
ctgcggcgacccatgcggcgtcccgtgcgg---cccctgcggcgt	Protospacer
 ******* *********************   *********   

38. spacer 1.1|1503869|42|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.881

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg---	CRISPR spacer
gtgcggcgacccatgcggcgtcccgtgcgg---cccctgcggcgt	Protospacer
.******* *********************   *********   

39. spacer 1.1|1503869|42|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.881

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg---	CRISPR spacer
ctgcggcgacccatgcggcgtcccgtgcgg---cccctgcggcgt	Protospacer
 ******* *********************   *********   

40. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.833

---atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
cccgtgcgg---cccctgcggcgtcccctgcgg	Protospacer
   .*****   *** *****************

41. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.833

---atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
cccgtgcgg---cccctgcggcgtcccctgcgg	Protospacer
   .*****   *** *****************

42. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.833

---atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
cccgtgcgg---cccatgcggcggcccctgcgg	Protospacer
   .*****   *********** *********

43. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.833

---atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
cccgtgcgg---cccatgcggcgccccctgcgg	Protospacer
   .*****   ***********.*********

44. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.833

---atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
cccgtgcgg---cccctgcggcgtcccctgcgg	Protospacer
   .*****   *** *****************

45. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.833

---atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
cccgtgcgg---cccctgcggcgtcccctgcgg	Protospacer
   .*****   *** *****************

46. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.833

---atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
cccgtgcgg---cccatgcggcggcccctgcgg	Protospacer
   .*****   *********** *********

47. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 5, identity: 0.833

---atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
cccgtgcgg---cccatgcggcgccccctgcgg	Protospacer
   .*****   ***********.*********

48. spacer 1.5|1504049|30|NC_010804|CRT matches to KR011061 (Skermania phage SPI1, complete genome) position: , mismatch: 5, identity: 0.833

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
tgtcggcggcccaggcggcgtcccaggcgg	Protospacer
   ********** *********** ****

49. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_010494 (Arthrobacter sp. AK-1 plasmid pSI-1, complete sequence) position: , mismatch: 5, identity: 0.833

gtgcggcggcccatgcggcgtc-ccatgcgg	CRISPR spacer
ttgcggcggcgcatgcggcgtcaccgtacg-	Protospacer
 ********* *********** **.*.** 

50. spacer 1.1|1503869|42|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.857

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg---	CRISPR spacer
ctgcggcggcccatgcggcgtcccgtgcgg---cccatgcggcgc	Protospacer
 ******* *********************   *** *****   

51. spacer 1.1|1503869|42|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.857

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg---	CRISPR spacer
ctgcggcggcccatgcggcgtcccgtgcgg---cccatgcggcgc	Protospacer
 ******* *********************   *** *****   

52. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.8

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
tttgtgcgtcccgtgcggcggcccctgcgg	Protospacer
 *   *******.******* *********

53. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.8

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
tttgtgcgtcccgtgcggcggcccctgcgg	Protospacer
 *   *******.******* *********

54. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.8

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcggcccatgcggcggcccgctctt	Protospacer
******************** ***.. *  

55. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.8

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccctgcggcccgtgcggcggcccatgcgg	Protospacer
 . * *******.******* *********

56. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.8

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccctgcggcccgtgcggcgacccatgcgg	Protospacer
 . * *******.******* *********

57. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.8

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcggcccatgcggcggcccgctctt	Protospacer
******************** ***.. *  

58. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.8

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccctgcggcccgtgcggcggcccatgcgg	Protospacer
 . * *******.******* *********

59. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 6, identity: 0.8

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccctgcggcccgtgcggcgacccatgcgg	Protospacer
 . * *******.******* *********

60. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.8

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
atgcggcggcccaggccgcgtccctggtgg	Protospacer
.************ ** *******  *.**

61. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.8

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
atgcggcggcccaggccgcgtccctggtgg	Protospacer
.************ ** *******  *.**

62. spacer 1.3|1503965|30|NC_010804|CRT matches to KR011061 (Skermania phage SPI1, complete genome) position: , mismatch: 7, identity: 0.767

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
aggcggcgtcccaggcggcgtccaggcggg	Protospacer
* *********** *********     **

63. spacer 1.3|1503965|30|NC_010804|CRT matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 7, identity: 0.767

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
tttctcagtcccatgcggtgtcccctgtgg	Protospacer
 * *   ***********.********.**

64. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccctgcggcgtcccctgcgg	Protospacer
 .   ******* *********** *****

65. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccctgcggcgtcccctgcgg	Protospacer
 .   ******* *********** *****

66. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccctgcggcgacccatgcgg	Protospacer
 .   ******* ******* *********

67. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccatgcggcggcccctgcgg	Protospacer
 .   *************** *** *****

68. spacer 1.5|1504049|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccatgcggcgccccctgcgg	Protospacer
 .   ***************.*** *****

69. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccctgcggcgtcccctgcgg	Protospacer
 .   ******* *********** *****

70. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccctgcggcgtcccctgcgg	Protospacer
 .   ******* *********** *****

71. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccctgcggcgacccatgcgg	Protospacer
 .   ******* ******* *********

72. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccatgcggcggcccctgcgg	Protospacer
 .   *************** *** *****

73. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
cccgtgcggcccatgcggcgccccctgcgg	Protospacer
 .   ***************.*** *****

74. spacer 1.5|1504049|30|NC_010804|CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
aagcggcggcccatgcggcctgccattcct	Protospacer
. ***************** * **** *  

75. spacer 1.5|1504049|30|NC_010804|CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gcgcggcggcccaggcggcgtccgacacac	Protospacer
*.*********** ********* *..*. 

76. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_020910 (Octadecabacter arcticus 238 plasmid pOA238_160, complete sequence) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcgacggctcatgcggcgtccgtcactg	Protospacer
*****.****.************  ..* *

77. spacer 1.5|1504049|30|NC_010804|CRT matches to KC292028 (Halovirus HCTV-2, complete genome) position: , mismatch: 7, identity: 0.767

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
tcggcgcggcccatgctgcggcccatgctg	Protospacer
 .*  *********** *** ******* *

78. spacer 1.1|1503869|42|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 8, identity: 0.81

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
atgcggcggcccctgcggcgtcccgtgcggcccctgcggcga	Protospacer
******** *** ****************** .*. * ***.

79. spacer 1.1|1503869|42|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 8, identity: 0.81

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
atgcggcggcccctgcggcgtcccgtgcggcccctgcggcga	Protospacer
******** *** ****************** .*. * ***.

80. spacer 1.3|1503965|30|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 8, identity: 0.733

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
gtgcggcggcccatgcggcggcccgctctt	Protospacer
.******* *********** *** . *  

81. spacer 1.3|1503965|30|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 8, identity: 0.733

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
gtgcggcggcccatgcggcggcccgctctt	Protospacer
.******* *********** *** . *  

82. spacer 1.3|1503965|30|NC_010804|CRT matches to MF580956 (Salinibacter virus M8CC-19, complete genome) position: , mismatch: 8, identity: 0.733

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccgtgcggcgtcgtacgccc	Protospacer
 ***********.********* . .**  

83. spacer 1.3|1503965|30|NC_010804|CRT matches to MF580960 (Salinibacter virus M31CC-1, partial genome) position: , mismatch: 8, identity: 0.733

atgcggcgtcccatgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccgtgcggcgtcgtacgccc	Protospacer
 ***********.********* . .**  

84. spacer 1.5|1504049|30|NC_010804|CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 8, identity: 0.733

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcggcggcccgtgcggcggccagcttgt	Protospacer
************.******* ** .. .* 

85. spacer 1.5|1504049|30|NC_010804|CRT matches to NZ_CP012267 (Cronobacter dublinensis subsp. dublinensis LMG 23823 plasmid pCDU1, complete sequence) position: , mismatch: 8, identity: 0.733

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gtgcagcggcccatgcggcgtacaccgtca	Protospacer
****.**************** *  .*. .

86. spacer 1.1|1503869|42|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 9, identity: 0.786

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccctgcggcgtcccctgcggcccgtgcggcgg	Protospacer
 *********** *********** ****** . . * ****

87. spacer 1.1|1503869|42|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 9, identity: 0.786

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
ctgcggcggcccctgcggcgtcccgtgcggcccatgcggcgg	Protospacer
 ******* *** ****************** . . * ****

88. spacer 1.1|1503869|42|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 9, identity: 0.786

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccctgcggcgtcccctgcggcccgtgcggcgg	Protospacer
 *********** *********** ****** . . * ****

89. spacer 1.1|1503869|42|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 9, identity: 0.786

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
ctgcggcggcccctgcggcgtcccgtgcggcccatgcggcgg	Protospacer
 ******* *** ****************** . . * ****

90. spacer 1.5|1504049|30|NC_010804|CRT matches to NZ_CP017759 (Cupriavidus necator strain NH9 plasmid pENH92, complete sequence) position: , mismatch: 9, identity: 0.7

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
gaagagcggcccatgcggcctcccatcatc	Protospacer
* . .************** ******    

91. spacer 1.1|1503869|42|NC_010804|CRT matches to DQ203855 (Burkholderia cepacia phage Bcep176, complete genome) position: , mismatch: 10, identity: 0.762

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccctgcggcgtcccctgcggcccgtgcggcga	Protospacer
 *********** *********** ****** . . * ***.

92. spacer 1.1|1503869|42|NC_010804|CRT matches to NC_007497 (Burkholderia phage Bcep176, complete genome) position: , mismatch: 10, identity: 0.762

atgcggcgtcccatgcggcgtcccgtgcggcgtcccctgcgg	CRISPR spacer
ctgcggcgtcccctgcggcgtcccctgcggcccgtgcggcga	Protospacer
 *********** *********** ****** . . * ***.

93. spacer 1.5|1504049|30|NC_010804|CRT matches to NZ_CP021369 (Acidovorax carolinensis strain P4 plasmid pACP4.3, complete sequence) position: , mismatch: 10, identity: 0.667

gtgcggcggcccatgcggcgtcccatgcgg	CRISPR spacer
tggcggcggcccattcggcgtccgtcagca	Protospacer
  ************ ********  ..  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 267976 : 323287 50 Escherichia_phage(25.0%) plate,tRNA,holin,transposase NA
DBSCAN-SWA_2 653684 : 662655 7 Hokovirus(16.67%) NA NA
DBSCAN-SWA_3 995244 : 1038973 37 Acidithiobacillus_phage(43.48%) integrase,transposase,protease attL 999912:999931|attR 1041322:1041341
DBSCAN-SWA_4 1056909 : 1065188 8 Bacillus_phage(16.67%) NA NA
DBSCAN-SWA_5 1496164 : 1540584 66 Burkholderia_phage(54.35%) terminase,plate,integrase,capsid,transposase attL 1494681:1494697|attR 1540739:1540755
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_010804.1|WP_155295605.1|1507972_1508140_+|hypothetical-protein 1507972_1508140_+ 55 aa aa NA NA NA 1496164-1540584 yes
NC_010804.1|WP_012467591.1|1508136_1508475_+|hypothetical-protein 1508136_1508475_+ 112 aa aa NA NA NA 1496164-1540584 yes
3. NC_010802
NC_010802 0 CRISPR Self-targeting Prophage 1 anti-CRISPR
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 111340 : 119001 9 uncultured_Caudovirales_phage(57.14%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NC_010801
NC_010801 0400000800000 CRISPR Self-targeting Prophage 1 2 3 4 anti-CRISPR
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 397407 : 459530 41 Thermus_phage(16.67%) integrase,transposase attL 414644:414660|attR 463002:463018
DBSCAN-SWA_2 478235 : 516200 37 uncultured_Caudovirales_phage(54.55%) integrase,transposase attL 507463:507477|attR 517472:517486
DBSCAN-SWA_3 522112 : 583017 56 uncultured_Caudovirales_phage(38.46%) integrase,transposase attL 545938:545954|attR 565782:565798
DBSCAN-SWA_4 588279 : 642999 55 Burkholderia_phage(33.33%) integrase,transposase attL 630726:630785|attR 643026:644235
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage