CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_013715	Rothia mucilaginosa DY-18, complete genome	10 crisprs	csa3,DEDDh,WYL,csb3,cas3,csb2gr5,csb1gr7,cas2,cas1,DinG	0	7	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_013715_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_1

91009-91090

Orphan

Consensus_repeat	Method
GGACGTGTAGGCGCGCGGGGCAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013715_1

>merge|NC_013715|1|91009-91090|CRISPRCasFinder
GGACGTGTAGGCGCGCGGGGCAGGGGAGAGAACCGCAGGGTTGGTTCGAGGCGCGCAAGGACGTATAGGCGCGCGGGGCAGG

>NC_013715|1|1|91009-91090|CRISPRCasFinder
GGACGTGTAGGCGCGCGGGGCAGG	GGAGAGAACCGCAGGGTTGGTTCGAGGCGCGCAA
GGACGTATAGGCGCGCGGGGCAGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_012902713.1\|99580_100237_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NC_013715.1\|WP_005504266.1\|97550_97943_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NC_013715.1\|WP_044142261.1\|80222_80894_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349969
NC_013715.1\|WP_044150002.1\|88200_88713_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376324
NC_013715.1\|WP_044150006.1\|96364_97192_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_044150000.1\|87280_87862_-\|arsenic-metallochaperone-ArsD-family-protein	unknown	unknown	gnl\|CDD\|377741
NC_013715.1\|WP_012902702.1\|86115_87141_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|236406
NC_013715.1\|WP_012902700.1\|85466_85853_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_044149999.1\|81159_81975_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012902706.1\|91174_92836_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NC_013715.1\|WP_012902707.1\|92948_94109_-\|sucrase-ferredoxin	unknown	unknown	gnl\|CDD\|227101
NC_013715.1\|WP_012902711.1\|98018_99455_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240541
NC_013715.1\|WP_012902708.1\|94222_94846_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_013715.1\|WP_005504234.1\|79427_80009_+\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
NC_013715.1\|WP_044150004.1\|89103_90708_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176499
NC_013715.1\|WP_155114735.1\|95004_96222_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NC_013715.1\|WP_012902715.1\|103233_103620_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_005504242.1\|82190_83243_-\|ornithine-cyclodeaminase	unknown	unknown	gnl\|CDD\|236064
NC_013715.1\|WP_172633351.1\|100533_102909_-\|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NC_013715.1\|WP_012902699.1\|83559_85161_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|185009

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_012902713.1\|99580_100237_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	8.4944e-70
NC_013715.1\|WP_005504266.1\|97550_97943_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	2.98465e-24
NC_013715.1\|WP_044142261.1\|80222_80894_+\|RNA-methyltransferase	gnl\|CDD\|349969	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	7.41937e-60
NC_013715.1\|WP_044150002.1\|88200_88713_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|376324	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.	6.19504e-56
NC_013715.1\|WP_044150004.1\|89103_90708_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176499	cd08556, GDPD, Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols are major sources of carbon and phosphate. Its catalytic mechanism is based on the metal ion-dependent acid-base reaction, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). Both, GDPD related proteins and PI-PLCs, belong to the superfamily of PI-PLC-like phosphodiesterases.	8.44816e-32
NC_013715.1\|WP_044150000.1\|87280_87862_-\|arsenic-metallochaperone-ArsD-family-protein	gnl\|CDD\|377741	pfam06953, ArsD, Arsenical resistance operon trans-acting repressor ArsD. This family consists of several bacterial arsenical resistance operon trans-acting repressor ArsD proteins. ArsD is a trans-acting repressor of the arsRDABC operon that confers resistance to arsenicals and antimonials in Escherichia coli. It possesses two-pairs of vicinal cysteine residues, Cys(12)-Cys(13) and Cys(112)-Cys(113), that potentially form separate binding sites for the metalloids that trigger dissociation of ArsD from the operon. However, as a homodimer it has four vicinal cysteine pairs.	1.26671e-07
NC_013715.1\|WP_012902708.1\|94222_94846_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.93835e-13
NC_013715.1\|WP_012902706.1\|91174_92836_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NC_013715.1\|WP_012902707.1\|92948_94109_-\|sucrase-ferredoxin	gnl\|CDD\|227101	COG4759, COG4759, Uncharacterized protein conserved in bacteria containing thioredoxin-like domain [Posttranslational modification, protein turnover, chaperones].	6.78204e-33
NC_013715.1\|WP_012902711.1\|98018_99455_+\|MATE-family-efflux-transporter	gnl\|CDD\|240541	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.08848e-87
NC_013715.1\|WP_005504234.1\|79427_80009_+\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	2.61671e-63
NC_013715.1\|WP_012902702.1\|86115_87141_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|236406	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional.	0
NC_013715.1\|WP_155114735.1\|95004_96222_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	0.000198913
NC_013715.1\|WP_005504242.1\|82190_83243_-\|ornithine-cyclodeaminase	gnl\|CDD\|236064	PRK07589, PRK07589, ornithine cyclodeaminase; Validated.	0
NC_013715.1\|WP_172633351.1\|100533_102909_-\|heavy-metal-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_013715.1\|WP_012902699.1\|83559_85161_-\|amino-acid-permease	gnl\|CDD\|185009	PRK15049, PRK15049, L-asparagine permease.	0

>NC_013715.1|WP_044150004.1|89103_90708_+|glycerophosphodiester-phosphodiesterase
MTAFPKISKNLSRRGFIGASTLAPAALMLQAGEAHAAANTRAQLAAVHSGSPAHQLLYKTDEFFIAHRGAGNISPEHTAYAYAESVRRGALAVEISVRTTSDGQFVCMHDTNIKRTTGASMDVRGHTLAELRQHKVNMRKNLGEKTDLYNIPTLEEAIAAVDAVPAGGEYASVGGKKVVLFLEAKDGPAQAGLVKFITERGLQRRTVIKMYRDGSGGFKPTSRYLKLANSAGCATWCYFDGGDPIDKISAMARHENVDAIGVPYYEKPTGASQGSMSEENVRALTGLGKAVIVWEIHRRSAYEKYKALGVKGFMCPDPYWVIGDPFDSSVKIKTGKRPHGMLPADPSVAADMPDLTGVAIVHNQRYDESVLLGPLANYTTREKYTLDFSMKWTGALPQQDGHYGYVAFGREHDGPFGIGKKFAANQEDGTYVLAIRPNYRGNSVAQILCFEPKQTSPRVLHTMKLRQKVTTGQALNCKIVVNKNSFYYTVNGQYSSPINHSAYRGPYVHFGRFHGTNDGGPLELTRIEARQSWI
>NC_013715.1|WP_044150002.1|88200_88713_+|PTS-glucose-transporter-subunit-IIA
MFGFGKKKKEAAAQEASSADVYVAPATGEYLPLSEVSDPVFSQGVMGDGYAVNPTAGTIVAPVAGTIALIQDTLHAFMLRTENGGEVLVHIGIDTVELGGDGFTKLANVGDKVEAGAPIIEVDWAAIEGRIPSKETMVMITNTAKFNISKDSESRRPVAAGDRVAQASKK
>NC_013715.1|WP_044150000.1|87280_87862_-|arsenic-metallochaperone-ArsD-family-protein
MTEAAETVLEVFIPGPGENPEDPQDMERSEFLGAAQEALDSGVDIEVYSTDSYPSAFEECAPVAEQIEMNGREVLPLMLVNGEVKVSFSYPTAEQIKRFSRAHLVAQPKANAAAAACGPSGSPAASMIPNLSGEPAGFAATLAGKAPQPVGGPEIGNRVNLMGGDTGDGIPTSGSVAVKSGGCGCGGCGCGGK
>NC_013715.1|WP_012902702.1|86115_87141_+|class-II-fructose-bisphosphate-aldolase
MAIATPEVYAEMLQTAKEKGFAYPAVNVTSSQTLNAAIRGFAEAGSDGIIQASTGGAAYWSGASKKDMVVGSLAFAAYAREVAKQYDVNIALHTDHCPKDKLEGFVLPLLAESEKAVARGEDPIFNSHMWDGSAIDLDENLKIAAELIERTSKAKLVLEVEIGAVGGEEDGVEGAIDDSLYTTVADAIKTVEAIGLGEKGTYMAALTFGNVHGVYKPGNVHLRPELLKEIQTEVGAKYGKGDKPFYLVFHGGSGSTEQEIADAVSYGVIKMNIDTDTQYAFTRPVAGHMFSNYDGVLKVDGEVGNKKTYDPRVWGAAAEAGMAARVVEACQQLGSVGTSIK
>NC_013715.1|WP_012902700.1|85466_85853_-|hypothetical-protein
MSKASAKNNPKQLDAKREKRARQAQRRAEREHPNAAAIAPVRAQLDEILERKSRHVLGHGDMAKSLELMEKMRDEGASDHEIDVALAEAKLPSVVQVGRKSLMRWPSWWWLNRRERALRAKIDRLMEG
>NC_013715.1|WP_012902699.1|83559_85161_-|amino-acid-permease
MSTSPNKNPQTSAADQYTKPPTDDPFAHEQEGFHKGLGARQLQMIAIGSAIGTGLFLGTGSRLQDAGPMLAVIYAVIGFFGYLILRALGELILHRPSSGSFVSYTREFYGEKAAFVSGWLYWLNWAMTAVADATAIAIYISWFGRYNQFFADIPQWLSAFIVVVVTVALNLISVKLFGELEFWFALIKILALLSFMAVGIWYLVFGEPINGVTPGLSLIAANDGFFPNGILPALIVVQGVVFAYAGIELVGTTSGETKNVEKVIPRAINTVIWRIAIFYVGSVVLLCLLMPYTAYKDAESPFVTFFDAIGIQGTAPIMQLVVITAAASSLNAGLYSTGRILHSMGVAGSAPKFTTKVSRSGVPVAGILLTGVIGLFGVVLNFFVPEQAFEVVLNIASVGTMASWAAIAMSHQKYLKLVGEGKYKRPNYRAPGGRFSDWAVMVFLAVVLVLMALDYPVGTYTLASLLLVIPLLIIGWYTVRDRVNEIARVREGYTGSVPVIAARPVVKKLVPEPRTHIELGELDLEDEDKPKGN
>NC_013715.1|WP_005504242.1|82190_83243_-|ornithine-cyclodeaminase
MTERPSAHAVEFVDVASMAKWIQKDGVGNIIAGMVDFLEEDFKKWQSFDKIPRVASHTPFGVIELMPTSDNITYSFKYVNGHPSNPARGFQTVTAFGLLADVDNGYPVFLAEMTLLTALRTAGVSAMVAKHLARKDSKKMAMIGTGSQSEFQALGMRAVLGIEDLSVYDVDPHAMEKFRRNLEPLGFRIHLAKDVDEAVEGADIITTCTADKQQAKVLLDRQVKPGVHLNAIGGDCPGKTELESEILDRSTVFVEFPPQTRIEGEIQQKDPDFPVVEFWKVLTGEEPGRVSDEQITLFDSVGFAIADFSGLRYARAATQDTDLQQFIDLVASPDDPKDLYSLVNVNVPVG
>NC_013715.1|WP_044149999.1|81159_81975_+|hypothetical-protein
MKKSAALLACFALALSSCAAAPKDTSLKAQLDFENNYITLPLDEYDRSDQALDITYRAYLLILKECYAKKGYDFEILENGLVSGNASEYGLWNVKHVANHFTSSKVGEEQERIYKSIPEDVRVSCREEHREELDMLYFDEDDEKKYRPVGRIRSEAYQRAQGDPEWKKARSDWWDCQREKGLTPRTGDGEWTSQETANLNADDPKVLEEVIRLATIEAQCSEKVRLAQRLGDLEASYQGPLIEKNQALLNELKAERDAKIAKAREIIATHQ
>NC_013715.1|WP_044142261.1|80222_80894_+|RNA-methyltransferase
MPAEAAVAEAVEGTEQGTARFEVGVGPWEGPWPEGDHWDEELLREGDRRNVVDKYRYWSMDAIIADLDTRRHDFHVAIENWQHDLNIGTVVRTANAMLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHPTIEDFVAWAQGEGLEIIGIDIFPDSVPLETYDLPKKCVLVFGQEGPGLSEELHAAARDTLSIEQFGSTRSMNAATAAGIAMHAWVRRHVFGQIPS
>NC_013715.1|WP_005504234.1|79427_80009_+|orotate-phosphoribosyltransferase
MTKLSENLPIEEARERLRQLIMELAVVRGHVVLASGKEADYYVDLRRITLHHEASRLVGQVMLDLLDKNGIEFEAAGGLTMGADPVGTAIMRAAGDQDRAIDAFVVRKAQKSYGMGRQVEGPSVEGRRVVAVEDTSTTGGSALTAVEALRKAGAEVVAVAVIVDRATGAKEHVEEVAGVPCLYAYSKDELGLD
>NC_013715.1|WP_012902706.1|91174_92836_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MTTSPESSAENPAAQPAAKSAQLRGRTEPHMHSFNMPQCEPINPYERPSYPFFYVPTDLLIGGTWVTGDNGSFPVHNPSCGQILAHVADATIEQGIEALDAACDARTSWAATSVRERADILNRAYTLMTQRTEVIARLMTLEMGKPLDQSRGEVAYAANYLRWYAEEAARNFGRTAVAPESGLQITTVRRPVGPCLLITPWNFPLAMAARKVAPALAAGCTAVLKPASLTPLSSLYFASLMREAGLPDGVLNIVTTSRTSEVVSALMADERLRKVSFTGSTAVGRTLLAQASQNVLRTSMELGGNAPFIVFEDADIPAAVEGAYAAKMRNMGEACTAANRFIVHEDIAEEFTRAFVERMEATVVGDGAIDGTECGPLIQPSAVESMLFMVEDALGKGALLACGGYIPELEENVPSDTGGMPRNLNKGNFIRPTVVTGVTDSMRVWREEIFGPVAPIATFSGYGEEGERTALKLANDTEYGLAAYVYTSNHPRFTRMAAGLEFGLIGYNSGVISNAAAPFGGVKQSGMGREGGPEGLEEYTELQYIGAPNPFAG
>NC_013715.1|WP_012902707.1|92948_94109_-|sucrase-ferredoxin
MTESCTPATPEPRATNPAELNNLRAAHADELSSRTRATSIPADSCSLYDDEALGGTAGRATAWLALEHVGQWGRDVLDGSALGEELSEALSEAVSQAGLKFLLIRQAGRAGRVLHGAPDASGSPTHRVLYALCTPGEEKLYSFSVSTPEQLLDLPLGNPQELIQATGAELMNSPAILVCTHSKRDRCCALRGRPIAAHLADILPGNAVWECSHTGGHRFAPVGIMLPTGYTYGRLSEPSALAAYLSLAGRSIPSLHGLRGRSTDTPVEQAAEVAVRLELEKKGEEVTSGGLVSRETSGREAFIALREAGIDVNVETSTEFSPEFFAAFSPKDFSEHPTMEAALTSHTDGRTWVTFFELVTLEPRPNSCGKGPADAFSRELLALRQL
>NC_013715.1|WP_012902708.1|94222_94846_-|TetR/AcrR-family-transcriptional-regulator
MPRLTDATKAARRAQIIEAAISCFLEKGYTNTSMSDIIKASGLSSGSIYSHFSGKEDILITAINERLNNVKELYETLPEGAGPQDILETIHTNQLVNDNFSAMLRIRAGSLHAPEIARATADTMPLLQGIIVKTLTPWAAEQLSVLHEINPNSAQRTPEQEALIADYARDTADAFMMVFQGYMLRSFFGAPEEKDRLYRVALALLPE
>NC_013715.1|WP_155114735.1|95004_96222_+|ABC-transporter-permease
MNNETATAVTAEAVTAAATQAAASQKIAAKSIAETSTQETTDRSSWLKVITTSVLSSLVVALIVLAFTWPTKTMEAKNLPVSIAGPEVTVSQFEQSLKDQGIETFDLKQASSRKEAEQQIKQRETYGAIIFTEGAAPEVLTAPAANAAATQMLNGVATQLNAQIQQKALAAKTEALTQAVQAGGEQGAQAAAQLEQMKVQAEQASAMAVKTTVVVPLSENDSSGSGIAISAFPLVIGGILGASFSVLRVNGTWRRFATATLYSVIGGALTALILNVWFGIIPGDFATLWAAFGATYLATAFFIVGVGALSSPLIGLAVGAVITMFIGNPISGASMPSVFLPGVWGQIGQMMVPGASSTLLRSIAYFPEATTSGQWLVLGSWIACGLLAGVIGWALKERRPATVEA
>NC_013715.1|WP_044150006.1|96364_97192_-|hypothetical-protein
MSALKKLLAATLISTVLSSCSFGPTLEKDESARAIFDTENDQVILPLDAYNTDGKDEYFTKALELARKKCFAEHGQHYEMFVRTEGAGRNLGRTYGIWNVEYAQKYGLHKSDESNTLDLSSPAASSDPGKDVSTECYQRASEEMAKIGEIPRGSATYRRLETDARNAAGDRQLKKSLDDEWKRCVKDKGLTPDSEMTVKEEKNIPQSNTPSEEEIRIAVIQAQCNQDVGRSQKLYDLEAQYQKPLVAKNQAALENELKEFKRRDEQFKQYVLDNQ
>NC_013715.1|WP_005504266.1|97550_97943_+|RNA-binding-S4-domain-containing-protein
MTAEDTNALTSARLDLWLWSVRIFKTRSLAADECKGGHVRVNDAPAKPSQKLKKGDIVKVRYPGWERVFKVEKLLVKRVGAPIAVTCYEDLSGPRPAYLSMPPVAKRERGSGRPTKKERRALDELRGRGA
>NC_013715.1|WP_012902711.1|98018_99455_+|MATE-family-efflux-transporter
MSTQKHPNTEPGAPAKNTAASPSANAGANTAEPSLNRRILALAVPAFGALIAEPIFVLTDSALIGQLGKAELAGMSIAATLVTTVVGLMNFLAYSVTPAVARAFGEKNLRRAWQIGVDGVWVAFGLGMLLMIAGYAFADPLLRGLGATDETMSYALDYLHHSLWGIPPMMIILAQVGTLRGLQDTVTPLKVATVGTLVNIVLNWLLIYPVGWGVAGSATGTSLTQWGMAAALGVVMMRGTREHAVRWAPDVAGMRSVLSLGSWLMLRTLSMRIASLLTVFVVARFGTEHTAAYQLGMGVFNLFLYALDSLAIAAQALLGKELGERDLNVESERVKVRQLKNRLLRMSLIYGVITGLICPLIGFFGSWIFTQDAQVAFLFTIATVIIALGQPIAAYVFTLDGILMGAQDVKYLAIGCFIMLVMYVPVMLGLHWAVGAGTMDALAGYCGLWAAYILYFQGIRAVIFGRRARSDVWMKAGA
>NC_013715.1|WP_012902713.1|99580_100237_+|NAD(P)H-dependent-oxidoreductase
MTVTREEALEIFARRRATRAYDPDRRVSDEDFAAILEFARLSPSSVGTEPWKFLVIQDPELREKLKPIAWGMVGALDNASHLVVLLAKKGLRYDTPWMRRTLEGRNLTEEQMQAALERYGNFQKNDMKILESDRALFDWASKQTYIALGNMMTGAAMLGIDSCPIEGMNYEAVNELLASAGLFDPEEYGVSVAVTFGYRAHEIAPKSRRSIEDLVTWA
>NC_013715.1|WP_172633351.1|100533_102909_-|heavy-metal-translocating-P-type-ATPase
MTCASCVGRVERKLRKIPGVDPAVNLPLESARVIVPEGVSDEQIVETINNAGYTAHLKNGPRAGAGTNASASDGGGQHTTPSMKGGFTDRIIYAAILGVPIFLISMFPAFQFPNWGWVVAILTAPVAFWCAAPFHRAALINARHGSSTMDTLVSLGVVVAYFYSLAQLLMNPALTAHVHHAGGSFWSMFTGHHAPLYFDSASMVTLFLLIGRAIEHRTRHRSSDALRTLLSMGAKEATLLRTDKQGVTKQVQVPVEDLMPDDLFLVRPGEKIATDGVVVEGTSAVDASLLTGESVPVEVHPGDAVTGATVNTSGSLTVRATRVGTETTLAKMGELVASAQETKAPIARLADRVSAVFVPVILTISALTLVGWWLVSGDGAAAFNAAVSVLVVACPCALGLATPTALLAGTGRGWQLGILIRNAQVLEATSTVDRVVLDKTGTVTTGEMSVAFYGTFGDYESAGDLAGISPDSTDSKSERSLSVLRDAAAVEALSEHPIARAIAGFAREQGVLAEGASAPSVSDFEGVPGGVRGVLSGAGEGTENGTPQLVVVGTPEYLQAAGAQLSEGQLALLDQARRAGLTTVVVARGEMPNNEAAENAPAPQPVGMISVADTPKPEAAETMAQLRELGLEPILLTGDAPQVAQAVASQVGISADNVYAGVTPEGKSQVVRQLQEAGHRVAMVGDGVNDAPALALAELGIAMGSGTDVAAEAADIVLTRSDVASVVTALRLSRATLRTIKSNLFWAFAYNTVAIPVAVAGLLNPMIAGAAMAFSSVFVVLNSMRLTAFRK
>NC_013715.1|WP_012902715.1|103233_103620_-|hypothetical-protein
MAYPPQYIAMVVGAVRTLVGAENMHLRDAIARVARQMNLDAALVDSWVKQSPEYTACEDASGAARRSGTSANKRSAEHEQGVKAREKANASPFPRATVKRAYGVSDRGAKVTGIRPHTSRPDGLPGDH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_2

424250-424362

Orphan

Consensus_repeat	Method
CGCGACTTCGGCGGCCGTGATAACCGCCGCGATGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013715_2

>merge|NC_013715|2|424250-424362|CRISPRCasFinder
CGCGACTTCGGTGGTCGCGACTTCGGCGGCCGTGATAACCGCCGCGATGGTGGCTACCGTGGCAACCGTGATGGCGGCCGCGACTTCGGCGGCCGTGATAACCGTCGCGATGG

>NC_013715|2|2|424250-424362|CRISPRCasFinder
CGCGACTTCGGTGGTCGCGACTTCGGCGGCCGTGA	TAACCGCCGCGATGGTGGCTACCGTGGCAACCGTGATGGCGGC
CGCGACTTCGGCGGCCGTGATAACCGTCGCGATGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_012902986.1\|415977_416469_-\|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl\|CDD\|213038
NC_013715.1\|WP_044150170.1\|433269_433935_-\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932
NC_013715.1\|WP_012902997.1\|429803_431228_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273327
NC_013715.1\|WP_005504824.1\|426327_426780_+\|MaoC-family-dehydratase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379194
NC_013715.1\|WP_005504804.1\|414493_414757_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012902981.1\|413708_414299_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NC_013715.1\|WP_044150168.1\|431925_433065_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|235839
NC_013715.1\|WP_005508334.1\|426779_427241_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239537
NC_013715.1\|WP_012902998.1\|431443_431833_+\|PGPGW-domain-containing-protein	unknown	unknown	gnl\|CDD\|370603
NC_013715.1\|WP_012902980.1\|412243_413578_+\|SseB-family-protein	unknown	unknown	gnl\|CDD\|377787
NC_013715.1\|WP_005504826.1\|427488_428595_+\|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl\|CDD\|237552
NC_013715.1\|WP_141744687.1\|418202_419366_-\|3-methyladenine-DNA-glycosylase	unknown	unknown	gnl\|CDD\|223200
NC_013715.1\|WP_044150165.1\|419704_421567_+\|DUF2079-domain-containing-protein	unknown	unknown	gnl\|CDD\|370724
NC_013715.1\|WP_012903001.1\|433956_434838_-\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|376313
NC_013715.1\|WP_044150164.1\|414896_415781_+\|zinc-metalloprotease-HtpX	unknown	unknown	gnl\|CDD\|235102
NC_013715.1\|WP_012902988.1\|416610_416997_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012902996.1\|428711_429671_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012902994.1\|425124_426126_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NC_013715.1\|WP_012902990.1\|417728_418106_+\|thioredoxin	unknown	unknown	gnl\|CDD\|239245
NC_013715.1\|WP_012902979.1\|410625_411963_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236766

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_012902986.1\|415977_416469_-\|YajQ-family-cyclic-di-GMP-binding-protein	gnl\|CDD\|213038	cd11740, YajQ_like, Proteins similar to Escherichia coli YajQ. In Pseudomonas syringae, YajQ functions as a host protein involved in the temporal control of bacteriophage Phi6 gene transcription. It has been shown to bind to the phage's major structural core protein P1, most likely activating transcription by acting indirectly on the RNA polymerase. YajQ may remain bound to the phage particles throughout the infection period. Earlier, YajQ was characterized as a putative nucleic acid-binding protein based on the similarity of its (ferredoxin-like) three-dimensional topology with that of RNP-like RNA-binding domains.	2.51382e-81
NC_013715.1\|WP_044150170.1\|433269_433935_-\|dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	1.12079e-50
NC_013715.1\|WP_005504824.1\|426327_426780_+\|MaoC-family-dehydratase-N-terminal-domain-containing-protein	gnl\|CDD\|379194	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase. It is clear from the structures of bacterial members of MaoC dehydratase, pfam01575, that the full-length functional dehydratase enzyme is made up of two structures that dimerize to form a whole. Divergence of the N- and C- monomers in higher eukaryotes has led to two distinct domains, this one and MaoC_dehydratas. However, in order to function as an enzyme both are required together.	4.38254e-38
NC_013715.1\|WP_012902981.1\|413708_414299_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	2.944e-30
NC_013715.1\|WP_005504826.1\|427488_428595_+\|UDP-N-acetylmuramate-dehydrogenase	gnl\|CDD\|237552	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase.	4.28991e-161
NC_013715.1\|WP_012902998.1\|431443_431833_+\|PGPGW-domain-containing-protein	gnl\|CDD\|370603	pfam09656, PGPGW, Putative transmembrane protein (PGPGW). Proteins in this entry are putative Actinobacterial proteins of about 150 amino acids in length, with three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.	3.77941e-16
NC_013715.1\|WP_012902980.1\|412243_413578_+\|SseB-family-protein	gnl\|CDD\|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	2.00251e-10
NC_013715.1\|WP_044150168.1\|431925_433065_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|235839	PRK06598, PRK06598, aspartate-semialdehyde dehydrogenase; Reviewed.	0
NC_013715.1\|WP_141744687.1\|418202_419366_-\|3-methyladenine-DNA-glycosylase	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	1.36266e-18
NC_013715.1\|WP_044150165.1\|419704_421567_+\|DUF2079-domain-containing-protein	gnl\|CDD\|370724	pfam09852, DUF2079, Predicted membrane protein (DUF2079). This domain, found in various hypothetical prokaryotic proteins, has no known function.	2.78622e-27
NC_013715.1\|WP_012903001.1\|433956_434838_-\|thymidylate-synthase	gnl\|CDD\|376313	pfam00303, Thymidylat_synt, Thymidylate synthase. This is a family of proteins that are flavin-dependent thymidylate synthases.	0
NC_013715.1\|WP_044150164.1\|414896_415781_+\|zinc-metalloprotease-HtpX	gnl\|CDD\|235102	PRK03072, PRK03072, heat shock protein HtpX; Provisional.	4.44423e-151
NC_013715.1\|WP_012902994.1\|425124_426126_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	1.82784e-162
NC_013715.1\|WP_012902997.1\|429803_431228_-\|MFS-transporter	gnl\|CDD\|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	4.98076e-68
NC_013715.1\|WP_005508334.1\|426779_427241_+\|MaoC-family-dehydratase	gnl\|CDD\|239537	cd03453, SAV4209_like, SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.	2.93582e-51
NC_013715.1\|WP_012902990.1\|417728_418106_+\|thioredoxin	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	6.91906e-34
NC_013715.1\|WP_012902979.1\|410625_411963_-\|hypothetical-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	1.53539e-07

>NC_013715.1|WP_044150165.1|419704_421567_+|DUF2079-domain-containing-protein
MAAEAHEASSNTDAPEQKNSTATSADRTQRAKKQPRQSLTERVKSIRPLELLPGLLLAAAVMALYTYYSLQQMKHWITPSWDLAIFTQMAQAYSHFSVPIVPIKGPDFNLWGDHFHPILVLLGPVYALFPSPTTLLVVQNALVAFASFAIVRFTQRAFALAQKTEDAQKTEDAQKNEPAQTAQSAKLQSVIPTITGLLLGAGFALSFGVQQAIAAQFHEVAFAVPLLAMSLGYLVLASRVSGTERARYLAYACWWSLPIAFVKEDMGITVAAIGLIIFIRTGWLSTAVDILMPRLSAGTPAPMRIRVHQLYSSWARTPAVAESTMVMIWGVFWSAVAIYVILPYFNSGGNFDYADKVNLSAALGDPFGSALQMLSNNTKLATLGLLLITGAVLWVISPLAAIALPTLAWRLLSTMESYWASTWHYSLVLMPVVFFALLDAVMRIRYGVVPAAIPARLGARAADSASAQEPQTNTEPGRLTATARRMPVWVLPAVALFLAASPIFVPGSQQPLASLGNAQFTASALTTTDQMKQDAVQKVPEGVSVASDLSVLTQLIPGRTVYWIGHTGEPAPDYVVIDRMSNSWGGNPPTNAAQYAADRYGHSYAKYATVGTIDIVRRVD
>NC_013715.1|WP_141744687.1|418202_419366_-|3-methyladenine-DNA-glycosylase
MPYAPALADVLQEPTVLHQPRVQVRTLSSAASPLPGVLAPEVCEVVIEPHVPVQLAQTLGSLRRGAQDFSYRALSRADGAERIWLTARTPFHEFPAVLYVERVAETATLPETLPSLHRLLMRPVRIRIWVSYSAADQQMQARADLQALAQEMTYWLGLHDPAEQFGALSSFESLPPRVQQAWRQNPGLRLSASGQLDRQMLNAIVEQRITQTEAFRTLGWVLRKYGSPAPSTGLGNQPEGMRVYPSARTLATIPTWDWHRAGVDKSRYDAVYAYARSAESLKNIAAEGDVALLARSLHAVRGVGPWSISEALQRVCGHPDAISVGDYHLAHAVGELFIGQRTDDAGMLSLLAPFSPHRQRLVRLMHASGFSKQRYGARMTIEDHRDR
>NC_013715.1|WP_012902990.1|417728_418106_+|thioredoxin
MATNEITQQNLTATVESNDIVFLDFWADWCGPCKQFSPVYEAASEKHSDIVFGKVDTEDQGQLAQAAGITSIPTIMGFRDGILVYQQAGALREDQLETVIGSIRELDMDKVRAEIAAAEGSAEKK
>NC_013715.1|WP_012902988.1|416610_416997_+|hypothetical-protein
MTIHNLSATDAHTSEEAHDLQTLLFIDLHTSLGAEPEDIPEAERLSEPDHHDIHLDLHEEDAEPSLFDGIGITLTEPSLVARFRGVRRDLEREIAGDMCTVEQARRYLEHLEIVLLLEQDGDTPSRSF
>NC_013715.1|WP_012902986.1|415977_416469_-|YajQ-family-cyclic-di-GMP-binding-protein
MASESSFDIVSKVDKQEVSNALHQAQKEISQRYDFRGVGAEIDYSGDKILIKANAEERALAVLAVFQSKLVKRGISLKSLDSGKPYASGKEIRIECSIKEGIAQDQAKKISKMIREEGPKGVKANIQGDELRVSSKSRDDLQEVIAMLKSADLEIDLQFVNYR
>NC_013715.1|WP_044150164.1|414896_415781_+|zinc-metalloprotease-HtpX
MHSHNNGLKTALLMGSMVGMMLLIGGLLSATFRTSIFIWVMGLFSLGSVVYTYWNSDKLALRSMNAYPVSREEVPVLYDIVEELSSRAGQPMPALYVAPTMTPNAFATGRNPQNAAVCCTEGILQLLDEREMRGVLGHELMHVYNRDILTSSVAAGIASIIGTIAQILSFGAMFGGSSRDGERSNPIAMFVIAMLAPIATQVIQMAISRTREFDADEDGARLTGDPLALASALNKLESGVSMYPMDPNNRNTEAASAMMIANPFGSLKNMLSTHPPMDQRIARLQQQAREMGQY
>NC_013715.1|WP_005504804.1|414493_414757_+|hypothetical-protein
MVYDFTNPIYILLMILLFGVPIVTPVIYGQYRSTTTGFDLEGQLMLGLLFILFLGAYGTILLLGIFPTATAQVLEQVPLVNIPGAIP
>NC_013715.1|WP_012902981.1|413708_414299_-|transcriptional-repressor
MTDAKTTSDTKKAQSPDHHNTGCAHTTGLPLLSAMSPEQLEEAWTTGLRARGRRVTKQRLAVLHAVQEHPHSTADTIVQAVRERIPAITVQSVYVILADLTDIDLLRKFEPPGTPALYETRTGDNHHHAFCVRCGKVEDVDCAVGSAPCLTPSDFHGMALFSADVLYQGVCVDCQTEQEAALARTQQEAAARALAA
>NC_013715.1|WP_012902980.1|412243_413578_+|SseB-family-protein
MTEPRLAETSSRAARIQDALNNIGSWLLDVVSVDSGWSEMVLDVKPLAGQIFVRVREFRNGEEFIGTIGPLKDGSPIIAEVRKLQRAAYDGNRGTWFTASIVVAATGWPNPQFSVGASYNRDDEPASWKNEGTLTATDVREHLAEFPRDASRIPAWARERMEGRARHSAAASLSSSEHEIPNPYLVAALETFRNDVQERTLINVVRTMLGGDVLLDATGSLLIPSETDPMGPESVLAHQVIRMPETGMQALCVFSSSEHIGKSYVRQESEGDELILREPAMKVFIDFLSNEALDLIVVDPGTDHECYIERAQVHWIVTSPRNDGAKMALVQDNMQMLLGSLVSPASVLLVGVDPADPSGTSFVFDPDENGNPKSLLVFTSPIEIAALDPHIEVRSANALDILRYALEIGAPSVKVNAINPSTVLSAAQIRELLEIVDSQPRMGA
>NC_013715.1|WP_012902979.1|410625_411963_-|hypothetical-protein
MTNSLQDLIDASIFISTEYQARLAELVGTSEWNVDFTSQSLDFETTPPLSLKPHLLGTESENRGTWIWSWQQLGYFPDSVVSAAIQARETGERDGLVELTTDELPLSESLARRLTLATKTISGLYAHYPLPAGAGVRAWTLLEGAELTLEAPTYKGIGRVIAKTLQSEEVHNQVLAVDSYAQQRGFHIAWDTEATAVLTATDGALRLWFDEGRISGIEQAEPQVGPEVLEQCAAAAAQRRESLAALRAEIERVAAAEAAAQNAQREQEAAERAAARAEAEAERAVEIAEHAPVAETEVPGVESTENLYPADEAPFDQEPAEHAEPGLVTVETLPGEYEAEETEQARVYTDESIGAEQPEYETVEASAEYAEEPVAAEAAAEQPVEVEQEAAEYEEQHVEPIRNAGAAPDLQAEHEEAARREQEEAARREAEQPKKKGFFSRFFGL
>NC_013715.1|WP_012902994.1|425124_426126_-|LLM-class-flavin-dependent-oxidoreductase
MSSNVKISVLDLMPHRPDQRQHQTMLNTIDAARAAESYGYERFWVAEHHNAGSLLSSATVVVMAEIAAATERIRVGSGGIMLPNHAPYVVAEQFGTLNAFHPGRIDLGVGRAPGTDPMTAAALRRDDSAAMSFPAEVQQLQRFLGEPSPMHRVHAIPGQGSKVPLYILGSSLFGAQLAAQLGLPYAFASHFAPAMLQEAVDTYRASFKPSEHLEQPYVMVGATAMLADTDERARYLYTTQQQHFLGVVRGNLSFAPPVEDMDAVWTDAEKMHVERMTAEAIVGSPATAQARIEDLVARTGADELIVMTEAWEHEDRLRSYELLSQLPVVRRAS
>NC_013715.1|WP_005504824.1|426327_426780_+|MaoC-family-dehydratase-N-terminal-domain-containing-protein
MSINPEIVGRVYPSENTYVVGREKIREFARAVHAENPLHHDVEAARAAGYADVIAPPTFAIILAQAADAALINDDSAGIDFSRVVHADQRFTHHRPIVAGDELRTEVHVDSVRVMGAGAMLTTREEIVDAQGEPVTTCISSLLVRAEEEN
>NC_013715.1|WP_005508334.1|426779_427241_+|MaoC-family-dehydratase
MVRFEDLEKGQDIGSRTVELSRASLVRYAGASGDFNPIHWNERFAQSVGLSGVIAHGMLTMGTAVQLVSDWVGDPGAIVDYQTRFTKPVPVADAPGGENPDTPTNALTISGKVGALNEEERTARIDLTVTARDEEGKEQKVLMKSQAVVRLSA
>NC_013715.1|WP_005504826.1|427488_428595_+|UDP-N-acetylmuramate-dehydrogenase
MTEKLLSELTTAQVGGPAKTYVRATSEAEIIEAVSAADAAGEPVLIVGGGSNLLVSDEGFNGTVVHIASEGVEVLPIPACGGANVRVQAGTIWDDFVKLSIENEWVGPAALSGIPGTVGATPVQNVGAYGVEVGEFIASVRTWDREKNTRKTFASADLRFGYRDSVLKRATVNGSPRYVVLTVDFQFTLGSLSSPIRYAELARSLGVEPGQRAESALVRQKVLELRGSKGMVLNPEDRDTFSTGSFFTNPIVPRSTLDSLPEGAPNFPVVVKTSPFTAGVEDSDHVKLSAAWLIQHAGFEKGFGLEGESREIAQGRASLSTKHTLAITNRGGASAEDIFAIARAVRDGVRERFGVTLVPEPVVVNGEI
>NC_013715.1|WP_012902996.1|428711_429671_-|hypothetical-protein
MLDSFLSSPYRTEFSPWPVSEHYATERAGGVPEAMLLPGELTVHRDDGAKMSYYLDWPEEFNEYTRAITLRPRTKNGYPQDFMFTVAVRDGQAVFTATALSFWEQRDGRPYDREPIARGYVDVASYESCEEYAGISAAPTLIGWDIADPYPARMALIRALCEGVASSITMGTRILADGQVQIDHKDGDLLALHVNAVSTVGGMVRALIIEQDRVPSGVSTGTSERADLQTRAYYANVLSPVPSEFGNLVWSHSEDAEYYPYRPTRHKPIFHAPCPPQKLPLAIQVLMEHLPAAPLAATRTAPKRRPYLPGQARVFSPRH
>NC_013715.1|WP_012902997.1|429803_431228_-|MFS-transporter
MSSPRPVSTDSSRTNAVAPAGTAAPATERNAAPTLNERLENLPFTRAHGKLLGISGLGWALDAMDVGLISFVMAALIKEWHLSPTEASWLGSIGFVGMALGATFGGLLADKLGRRYIFALTLLIYGLATGASALATSLGVLLVFRFLVGLGLGAELPVASTLISEFSPRAIRGRVVVALEAFWALGWILAALIGTFIVPQANGWRWALAIGLIPAIYSLVIRMGTPESVRFLESVGKHDQARQVVERFEASPALFSRTKKQAEDTSVHGAAESADNAESAKIHSIWAAGQRRKTIALCVIWFCINLSYYGAFIWIPALLNAQGFSLVKSFAFTLIMTLAQLPGYAVAAYLIEKWGRRATLAAFLLGSALAAAGYGMAHAEVFIILAGCMLSFFNLGAWGALYALSPEIFPTHLRGTGTGAAAGIGRIASIAAPLIVPPLVAFGGTPLLFTLFSTAFLVAATTVFLLPERRGESL
>NC_013715.1|WP_012902998.1|431443_431833_+|PGPGW-domain-containing-protein
MEGAPLKTIEDEVKESETSRFHRWLEARKERMHAHPVMRHLYKPLVIGVGAFCFIAGLIMLVTPGPGWLFIFIGLGIWGTEFTWARRANIFMKHVVLTAWYRYRAWRQQRKERKAARKAERKAAAANQR
>NC_013715.1|WP_044150168.1|431925_433065_-|aspartate-semialdehyde-dehydrogenase
MNFNPGDSVGFVGWRGMVGSVLMKRMVEEGDFEGITPVFFTTSNVGGQAPTFDGVLEPSELKDAYDIDELRKHSIIVTAQGGSYTEAVHPKLRAAGWDGLWIDAASTLRMNDDSIIVLDPINRDVIDRGLASGVKDYIGGNCTVSCLLMGLGGLFKNDLVEWATSMTYQAASGGGARHMREVLAQFRDLGNEVAAELDDPASAILDIDRKVLAKQRSGELDSTQFGVPLSGSLIPWIDSDLGNGQSREEWKAEVETNKILGRFADDKVTMDGLCVRIAAMRSHSQALTIKLKKDLPLEEIERIIAEDNPWVRFVPNEREASMEQLTPVAASGSLEIPVGRVRKLAMGPEYISAFTVGDQLLWGAAEPIRRMLQIAVGKL
>NC_013715.1|WP_044150170.1|433269_433935_-|dihydrofolate-reductase
MYRLGAIWAQTDAGIIGRAGDMPWYAPEDLAHFKKVTLGAPVIMGRRTWESFPPRFRPLPGRTNIVISRSVTEAEERDGALWVPSLDAALYAARDAVGAPVEATPADTATDAPAVDAWIIGGGSVYAEALSRNDLPAFGRVKTVERTLFYCQEGNEITGDTRAPELQLADSHGNCATGSPNGCWHVVSETAWEKSEKGYLLDESGTKNPMYFSFQRLERLP
>NC_013715.1|WP_012903001.1|433956_434838_-|thymidylate-synthase
MTHAIPTPYEDLLREILEENKDAIAADAQRSDRTGTGTFGVFGRQMRFDLRESFPLITTKRVHFKSVAIELLWFLRGSSNVRWLQERGVTIWDEWADENGDLGPVYGVQWRSWPTPDGGTIDQIAKVIESLKNNPSSRRHIVTAWNPAEVDSMALPPCHALFQFYVHERADGVKELSCQLYQRSADMFLGVPFNIASYALLTYLIAQEVGMEPGEFIWTGGDCHIYSNHLEQVKKQLGYGTDPEGNPYPPREPYPYPKLVIKTKKPSIFDYEYEDFELVDYKHHPGIAAPIAV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_3

806896-806978

Orphan

Consensus_repeat	Method
GGGCGGGGGAGGGCTGTCGCGATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013715_3

>merge|NC_013715|3|806896-806978|CRISPRCasFinder
GGGCGGGGGAGGGCTGTCGCGATTTAGTGTGTTGCTTGGCGGTTGGTGTTTTGCATGTGGGCGGGGGAGGGCTGTCGCGGTTT

>NC_013715|3|3|806896-806978|CRISPRCasFinder
GGGCGGGGGAGGGCTGTCGCGATTT	AGTGTGTTGCTTGGCGGTTGGTGTTTTGCATGT
GGGCGGGGGAGGGCTGTCGCGGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_012903279.1\|801748_802288_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012903292.1\|819622_820720_+\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|237363
NC_013715.1\|WP_012903283.1\|807227_808772_+\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237012
NC_013715.1\|WP_044150319.1\|813150_813510_+\|DUF86-domain-containing-protein	unknown	unknown	gnl\|CDD\|225236
NC_013715.1\|WP_044150320.1\|816496_817861_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012903273.1\|791996_793088_-\|S-(hydroxymethyl)mycothiol-dehydrogenase	unknown	unknown	gnl\|CDD\|132492
NC_013715.1\|WP_012903280.1\|802750_804553_+\|acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236098
NC_013715.1\|WP_012903282.1\|805318_806347_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NC_013715.1\|WP_012903275.1\|794371_795739_-\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|224214
NC_013715.1\|WP_012903288.1\|812836_813154_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NC_013715.1\|WP_172633353.1\|814504_815908_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NC_013715.1\|WP_012903276.1\|796000_797482_-\|malate:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|377591
NC_013715.1\|WP_012903287.1\|809904_812658_+\|FtsX-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NC_013715.1\|WP_012903274.1\|793222_794254_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|184875
NC_013715.1\|WP_012903289.1\|813631_814459_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NC_013715.1\|WP_012903281.1\|804552_805053_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NC_013715.1\|WP_005508643.1\|800329_800806_-\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|224146
NC_013715.1\|WP_012903286.1\|809133_809901_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NC_013715.1\|WP_012903291.1\|818129_819185_+\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|179579
NC_013715.1\|WP_012903277.1\|797795_799913_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173858

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_044150319.1\|813150_813510_+\|DUF86-domain-containing-protein	gnl\|CDD\|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	7.9715e-20
NC_013715.1\|WP_012903292.1\|819622_820720_+\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|237363	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional.	0
NC_013715.1\|WP_012903283.1\|807227_808772_+\|methionine--tRNA-ligase	gnl\|CDD\|237012	PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed.	0
NC_013715.1\|WP_012903291.1\|818129_819185_+\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|179579	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional.	0
NC_013715.1\|WP_012903273.1\|791996_793088_-\|S-(hydroxymethyl)mycothiol-dehydrogenase	gnl\|CDD\|132492	TIGR03451, S-hydroxymethylmycothiol_dehydrogenase, S-(hydroxymethyl)mycothiol dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. [Cellular processes, Detoxification].	0
NC_013715.1\|WP_012903277.1\|797795_799913_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173858	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an ATP-binding cassette (ABC)-type dipeptide import system. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	1.98536e-49
NC_013715.1\|WP_012903282.1\|805318_806347_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NC_013715.1\|WP_012903275.1\|794371_795739_-\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|224214	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair].	2.12946e-54
NC_013715.1\|WP_012903288.1\|812836_813154_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	2.49509e-11
NC_013715.1\|WP_172633353.1\|814504_815908_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.99815e-34
NC_013715.1\|WP_012903281.1\|804552_805053_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	2.05279e-87
NC_013715.1\|WP_012903287.1\|809904_812658_+\|FtsX-family-ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	3.36127e-18
NC_013715.1\|WP_012903280.1\|802750_804553_+\|acetolactate-synthase-large-subunit	gnl\|CDD\|236098	PRK07789, PRK07789, acetolactate synthase 1 catalytic subunit; Validated.	0
NC_013715.1\|WP_012903289.1\|813631_814459_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.96012e-60
NC_013715.1\|WP_012903276.1\|796000_797482_-\|malate:quinone-oxidoreductase	gnl\|CDD\|377591	pfam06039, Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.	0
NC_013715.1\|WP_005508643.1\|800329_800806_-\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	3.481e-76
NC_013715.1\|WP_012903286.1\|809133_809901_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.68933e-107
NC_013715.1\|WP_012903274.1\|793222_794254_-\|alpha/beta-hydrolase	gnl\|CDD\|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	6.61108e-05

>NC_013715.1|WP_012903282.1|805318_806347_+|ketol-acid-reductoisomerase
MAATIFYNDDADLSLIQGRTVAVIGYGSQGHAHALNLRDSGVKVIVGLSEGSKSRAKAEAEGLRVATVAEAAAEADVIMILTPDQVQAKVYAESIEPNLKPGNALFFAHGFNIRFGYITAPEGVDVAMVAPKGPGHTVRREFEAGRGVPALVAVEKDASGEALALALSYAKALGATRAGVIKTTFTEETESDLFGEQAVLCGSTSQLVQYGFEVLTEAGYQPEIAYFEVLHELKLIVDLMIEGGIAKQRWSISDTAEYGDYVSGPRVISPEVKENMKAVLADIQNGNFAKRFMEDQAAGAPEFKALRAKGEAHPIEATGRKLRELFSWNTADDDYTEGSVAR
>NC_013715.1|WP_012903281.1|804552_805053_+|acetolactate-synthase-small-subunit
MSQHTLSVLVEDKPGVLTRVSGLFSRRLFNILSLAVGPTENPGVSRITVVTEGDAHTIEQITKQLNKLVHVLKVVELPTDSSTQRDHILIKVKADPVVRLQIVQAADLFRASVIDVSPESLVIEATGSQEKLNALLDVLEPYGVREIVRAGTIGLARGPRAMSERI
>NC_013715.1|WP_012903280.1|802750_804553_+|acetolactate-synthase-large-subunit
MTMGFSTSDDAANAPAERMTGSQAIVRTLEDLGVTDVFGLPGGAILPTYDPLYDSKKVRHILVRHEQGAGHAAQGYAVSSGKTGVCIATSGPGATNLLTAIADANMDSIPLVAITGQVSTKLLGSDAFQEADIVGMAMPISKHSFMITDPQDIPRALAAAFHIASTGRPGPVLVDVTKDAQVGMMEYRGIPEDLELRGYTPVTRGHSKQIHEAAKFITESKRPVFYVGGGLVRAGASEEFHKLAKLIGAPVVTTLNAIGAFPDSDPQNLGMPGMHGTVPAVAAMQKSDLLITLGARFDDRVTGKLDSFAPEAKVIHIDVDPAEISKIRFADVPIVGDLKYVLPELTDLLSTEFADQLPNLTEWWNELNVIRKDYPLGYEKPNDGLGSPEYVLERISALTGPDAYYVTGVGQHQMWGAHYIQQESPRHFISSAGLGTMGYGVPAGMGAKVAHPDSTVWIIDGDGCFQMTNQELVTCAQNNIPVKVAIINNSSLGMVRQWQTLFYNERYSNTDLKDGHGTVRIPDFVKLGEAYGCATFRCERDEDVDATIKAALEINDRPVVIDFTVSPHALVWPMVPAGVSNDKIWIAKNTSPEFDREEEN
>NC_013715.1|WP_012903279.1|801748_802288_-|hypothetical-protein
MTEPIIPVADELTEASKYAEVVDPRNSVESDVFLTGEELIRVLHPVFDEQIINYGAYNLVYATGRAVYRNPDLALHQSPDQGHFIVGYQDAPDEVIIAPVNLPALTPAGTATTIDNTNALHAYRVGDDAVTIESVNGSSFYLSFEDNAEVATHLGTGLLEQGKDVEDFREFVTRIWPVL
>NC_013715.1|WP_005508643.1|800329_800806_-|thioredoxin-dependent-thiol-peroxidase
MSVRLEPGTPAPAFTLADASGKEHSLSDYAGSKVILYFYPKASTPGCTKEACDFRDNLASLKSLGYVVLGVSPDSPAAIARFVEKESLTFPLLSDADHAVAEAYGAWGEKKNYGKVYEGLIRSTFVIDEQGVISVAQYNVRATGHVAKLRRDLGIDPK
>NC_013715.1|WP_012903277.1|797795_799913_-|ABC-transporter-substrate-binding-protein
MQHQPYASSAVGSSDALLRATAGSSGLSRRAVLRFGALFSAGLALSACSGQSSAGSSASASASSADARRVFRFAQGAAPLGLDPALFPVASTYQVTAQILQTLLVANHYTGDPEVQDSLCSEWTVSDDRLVHTFVLREAHFSNGSALTADAVVQNFQRWQALATGEGTAALAVPAQPLFAWGFGVPKPGSSDPSAVEPAPVQASPSGAATPGATASVSASASASAHAATQPDDKKTSKKADAQSSAVQSFLPLVSSVVAKGNSVVVTLSRPSLAFPRILTQQAFGIIDPSLFGSDQKLTGNPVGTGAFLVDSFKDGTVRLLKNTHFDGQAPELDEIQISTLTSSDKRYFALMEGHIDACDQVNSSDLGQLARDGYQTPGRDPFSLVYLSLNTAHPVLKNISVRRAISHAVDRGALRQYYPQGTSDAQTLISPSFRIKADDAKDYTDRNQDMARSLLATAGYDNQVIECYYPADVSLPWMDTPQKVYSEMVASLIEVGLNIKPVPLPWAEYLPKSREVSSERGITLAGFYGMYRDPYAFFGPVLAPLIAEHQVRSLIANAPSDMTTGLTKKSSDVPSSGGSDSNVRISATPSPQPSYSPDSSSPEEEASASASPSPSASPSPQPTAVAVAPSPRFTEILEAIRTADSADSVDSQRELYAKVVSQLGQFMPAVPLLNVTSKVAVSREVQGYQTEQNAIELFGKLRKS
>NC_013715.1|WP_012903276.1|796000_797482_-|malate:quinone-oxidoreductase
MVARTERTDVVLVGGGIMSATLGVFLKELEPSWNIILLERLDKAAQESSNPWNNAGTGHSALCELNYAPAGPDGTVSAAKALNINEQFQISRQFWASLVEDKILDNTDFINPVPHMSLVFGEDHSKYLAARFDSFRKEKLFERMEFSTEREKIGEWAPLTVNGRKGNDPIAATWSPEGTDVDFGALTQQMIDYLQTKGVEVRYGYQVTNLNRESNGSWTVDAINRINKEEPLTINAKFVFLGAGGGALHLLQKSGIEEGKGYGGFPVSGLFLRNTHEATANQHNAKVYGQASVGAPPMSVPHLDTRYVDGKRALMFGPYAGFKTNFLKQGSLLDLPLSLRPHNIYPMTRAGIDNLSLVKYLLSELVKDKNARLESLYQYYPEAVGGEWELIEAGQRVQIMKKDAKKGGILQFGTEVVSAADGSIAALLGASPGASTAAPIMLNLLAKCFPSKIAGWEPRLKELIPGYGVKLNDNHDLADELMAHTAKVLGIHN
>NC_013715.1|WP_012903275.1|794371_795739_-|YihY/virulence-factor-BrkB-family-protein
MAAHTGSSTDTSSTQVPAGARRGLFSRKQKPADPKYVSVKLRDFPKGSILYILRRAIYKFGANGGTDMAAALTYFTVLSIFPALLAIVSLLGVFGHGEESAAVILAFLKDNAPAQMYAILEDPIKQITGDHGAGLVLLTGILSALWSASGYTGSFGRALNTVYNVREGRPGWILKPLNVFVTTVIIILVVLMMLMMLLGVTVLDMVGRYVPETVDMELIKLIWLNGRWVLILFMAIALITLLYAATPNVRRYKAWRLSPGAALALFGMGLGAFGFTLYANNFSKYNATYGLIGGVIVMLLFIWIMNNMLLFGAHLDAEIMLMRQIIAGDDDHGHLKVQPRSTSASRALKARQERLMSAGRELQQQAAGQGMFPKPKGPSIADRVQKAVDTNTTMIRTFIADGKERIENGKEQLQQKQAKADATAEATESEAKVDSQQEALFDLGTDNSTDAAKKN
>NC_013715.1|WP_012903274.1|793222_794254_-|alpha/beta-hydrolase
MTSAEFSPAPFAVPSAAAPNAAAPAVALPDLEYTLYQPQQLKSRIPALMIHGFATRGDQLYGGTGWIRQYLRAGYPVLAVNLPYHTNTYLKDPQFTVDCKLPAHTQVMSSEIPFDSVPSVNTTGQRLTPIHLLTNALAQLLRAVATENNLDVELQPRAHVIGFSFGARVGWELALTHPEAVASLTLGGLPLHDHLITLRAMLEAHEGTSASASAETPAADSAAEAIASFTSIIDGSPIQPDALLKFVRIPFGPFFDVPALRAGSPDLPAGHPGAHPHAPIAVVLGDADTIAADGAELYDMVRDDNPLNRFISLPGRDHVNALTSGAFRRGALAFAAEVEAATS
>NC_013715.1|WP_012903273.1|791996_793088_-|S-(hydroxymethyl)mycothiol-dehydrogenase
MHKVKAVVALSQDAPVTVTTINVPDPGKGEALVKVLTCGVCQTDHHYVTGGVGQDFPYLLGHESAGIVEAVGDDVTDIAPGDLVILNWRAVCGECRACRKGQPQYCFATHNATQKMTLEDGTELTPALGIGSFAEKTLVAAGQCTKITADISPEQYAAIGLLGCGVTAGLGAVLNTGELKRGESVAVIGCGGVGTAAIAGAQLGGATTIIAVDVDEEKLARAREHGATHTVNSSKVDPVEAIKELTGGFGADLVIDAVGVAPTFKQAFEARDLAGRVVLVGVPAPGATWDIPLDEVFGRGGSIKSAWYGDTLPSRDFPEFVDQYLLGRLDLDSFVSERIRLEDVNEAFETMKTGRVLRSVVEL
>NC_013715.1|WP_012903283.1|807227_808772_+|methionine--tRNA-ligase
MTATPFYITTAISYPNGNPHIGHAYETIAADVLARFKRLDGFDVRFMTGTDEHGQKMQTTAEKLGKTAKELADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYAGWYSVRDEAYYAEDETEVRDGQRYAIATGTEVEWTEEESYFFRLSKYGDKLLELYANEGFVYPESRRNELISFVKGGLNDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITGLGYPDTDNELFAKYWPADLHLIGKDITRFHSIYWPAFLWSAGIELPKRVFGHGFLLVNGEKMSKSVGNVVDPANLVDAFGLDAVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRSLSMVAKNCGGAVPAHGEFTEADRQILDEAAALYEPVRADFDEQAFHRALDRIWTVLADTNAYFAEQEPWTLRKNGELDRMNTVLYVTLEVVRQVALLLQPVMPDSTAKLLTLLGVPEGESRQFAALGTALVPGTELPAPAPVFPRYEAPKA
>NC_013715.1|WP_012903286.1|809133_809901_+|ABC-transporter-ATP-binding-protein
MTTTTPHAQTAQPAVSARNLSKTYGMGEATVHALNNVSVDFEQGKFTAIMGPSGSGKSTLMQTIATLDTPDPNPATSIRIGGTELFGLKDNALTEFRREHIGFIFQAFNLVPTLTAGQNIDLPLGLAGKKPDPQWRDYLVKTLGLETRLDHRPEQLSGGQQQRVAIVRALLARPEVVFADEPTGNLDSNSGAEVLRLLRAAATDHAQTILMVTHDANAASYADRVVFIKDGMVAGEMIEPTYDAVLGAMAQLEGR
>NC_013715.1|WP_012903287.1|809904_812658_+|FtsX-family-ABC-transporter-permease
MATTLNTVARSNLRASKGKYVLTGIGIAISSFFIAAIMMLTNSLQATVNSSVGDVLSRAEAVVASAATTSDGRDSTSIYLTRDQIQKVEKSDLLSGYWVQYAVTGKLGTGDQATQVQYDQLPADSSLFPYKVQGKIPSSDHEIMVSTYFAKKHNLSLNGKITSTDIVESVSAPGTDKTAEYTVVGLFDPGFEGSTTNQAVFIGGTSLGEAALKAAEAENKSSAAGYRNMAGANLIYLKFKDGVTDAKLKSLQDTLSSGDTKNDPRVMTGQKLLEDYQKTISTVFTSISVVLGAFAALALLVSSFVISNTFAVLVGQRIRELALLRTLGARGGSLVRMLLIESITVGVVFSLIGALLTYPVGALVGANLTTIMISYSITPVIISTLICTIVTVLASLSPARSALRISPISAMSEHTNLEVRKPGKVGPILGLVFGAAGIGLAMLAQNQGSGEGAGNKAILLMMGAALLLGIAVFLLTPLVLPPLVRALGKVTRTQTGKLALANALRSPKRTVSTGRAVLVGTLVVSTVLTGYSVLSASLTKALDQQYPISAQAKYSSYDQSEAASTVTKAEEIASKVKGIKNVQASAVGYAAGVVDYTVEYEGQTANQNSDLVALSSSDLKAILPGENLNLADDTVLVPQGLWKSAGLNESSRLKAHGPLGEVELKPVKSATKQNLLIVNPATAAKLQDAKNPQKVANPAAEEAQKRLEEAIASGDKEAQTKAARLTVTSQATGNDTVVLVRAASPLTSSENATLQADLNRASPDSSFTGGLQERQTYDQLLTVMLTFTLVMLMLAVVISIIGVANTMTLSVNERRRENAMLRSLGLSRKQLRRMISIEAILITLAAVVLGMVSGGVIGSLSAQIIMSSMSASAPLVLDLPYVWYVVILIVGVLAAMLASALPAARSARMSPVEGMRG
>NC_013715.1|WP_012903288.1|812836_813154_+|nucleotidyltransferase-domain-containing-protein
MSTSHPNLRRGYTLPHEAEVLQILRDAGVRRARLFGSAARSELTETSDLDFLVQMPGVAPFDEFMQMVDAQHRIEQLTGRSVDMVTQLRPRIYAEAEPDMVELPL
>NC_013715.1|WP_044150319.1|813150_813510_+|DUF86-domain-containing-protein
MKSSLDDFSLILESAQRIYSFTPARYEDLIDDSNAVVQDALCMRFQVIGETLNRIRSKYPEDYERYERAEWQYLIAIRNVISHSYVSVDFAVLWDVARNKLPELMSDFERIIDQIQETT
>NC_013715.1|WP_012903289.1|813631_814459_-|response-regulator-transcription-factor
MYSSAPQTTQPIRVMLVDDQRLVRGGLSMLVNSQPDLQVVMEADDGLAAIDVFDRMVSEGHAPQVILMDVRMPHCDGLEAARRILERDAQRGVAEEERVRIIMLTTFDIDEYVYSAVRAGASGFLLKDTPPEQLLEAIRTVHRGDAVIAPSATRRLLEHMIPVLDSPAGVPAAPVPVAPPAAGSELPKATFIPAEHASFEPVQDYPHRELIEQLSPREFEVLGLIARGLSNAEITRELVLSEATVKTHVSHVLAKLGARDRVQAVIMAYEAGIAH
>NC_013715.1|WP_172633353.1|814504_815908_-|sensor-histidine-kinase
MPLKHTEPQQNPQHSTETAESGYAVTHTRGSSENSDLPADAISASSRVQSYLRDNRGWMNIIVVAHMQFFCCVLSVAFINGYGWIPLISALCSTTALYFRYRFPYGSIYVVIAALCLTLLSPFPDSLAVTCYPPVTLAAYHIGRHWTRRARFRGLILGWVGALAVTVQASLSFLYHWDDIPARIFISLMLGVLCGSIFTVFWFLGDSRRMRELRSEEFEERARRLEYEQEQERRLAAQDERTRIAREMHDIVAHSLSSIISQADGARYAAASARTARAQQAEQSGQAQQQSEPDIAEQTLKLIADTARDSLTQMRSLLGLLRTDEATTYAPVPTLSDVPALVEQSRRAGLPVTFTGITGTMARTLPQGAELAAYRTVQEALTNALKHSPGAATTVTIHWSDEVLQLRVENEPVSSATAQHIARPVPGSGNGLRGMSERIALYHGTLTYGLQPDGGWLVEAALPYSDL
>NC_013715.1|WP_044150320.1|816496_817861_+|hypothetical-protein
MSTNISRRKVVAGAAWAAPVVAASAAVPAFASSTECEWESTAAYTAEGNASGAKGTQSFVVPPLVDKIKFEVVGGAGGTNYDDIAAGSGAKITGIIEVKPGQTVQLIGAAGGIGKGPLSPAEGGEGYGNGGSSNLPTPIPASVMQRVNAIWPKDSSLKRIIYSASGGGSSALVINGTPVAVAGGGGGAGFVNSGGANNNEQYAAAGAVDAGRLWPSGAKRNVYPVIGSTGGSADGAEGSAGKQGALTYAADTSVTTTVNAGEGGSAGIGGNGGSKTDLPSGKSPNGVLGYSSANNQEIYASSKSGNQGGDGFKGNGGDGVGSYSYLIDNNDRTKKEEGTKNGKGYALEYESIGFNFNGYESVISAGGGAGYGGGGSGASTSSSAIVLTQKWNNNPNGLRQNVGFAQFGGGGGAGGSYVAPGVSGGSIESAGNAPTERGVRGNGYVKVSLCKRTA
>NC_013715.1|WP_012903291.1|818129_819185_+|3-isopropylmalate-dehydrogenase
MTEARSIDLAVIPGDGIGPEIITEAQRILTRACELENITVTPTHYKLGAEHWLETGETLPDSTMESLKQHDAILFGAIGADPRSGKIPSGLIEREMLLKLRFAFDHYINLRPSRLYPGAVSPLANPGNIDFVVVREGTEGPYIGNGGVIRGGTPHEIATEVSLNTAHGVERLVRYAFELASTRRKKVTLVHKTNVLTHAGRLYNRYFTEIAAEFPEVETDYLHIDATTIFMVTDPARFDVIVTDNLFGDIITDLAGAVTGGIGYAASGNINAVGEFPSMFEPVHGSAPDIARQNKANPTAAILAGAMLLRHLGHDAAAARIEDAVEADMRENGATVRGTDQVGADVLARLG
>NC_013715.1|WP_012903292.1|819622_820720_+|branched-chain-amino-acid-aminotransferase
MATEFSHEANQSPATAERRAEILANPGFGDYFSDHMVTIDWEGDYKTGGTWYDARVHPYGPLTLDPASAVFHYGQEIFEGIKGYRHADGSVWTFRPEKNAARFANSARRLSLPELPAETFIESLRELVKADEAWVPTGDGEAFYFRPFMIATEAYLGVRPAKHVQYHVIGSPAGNYFGTPEPVDIWLSTTYARAGEGGTGAAKCGGNYAASMIAQTEGEKHGCKQVIFKDPHRGDAIEELGGMNVFFIFGKENKIVTPELTGTILEGVTRSSLIQLAKDRGMTVEERAITLTEWREGVANGDITEIFACGTAAVVAPIGKLKAEDFEIPAPTEHFGEISKSLREELVGIQTGVVEDRHGWMTRLI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_4

1292143-1292224

Orphan

Consensus_repeat	Method
ACTCCCCCGCGAGCGTTGTCCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013715_4

>merge|NC_013715|4|1292143-1292224|CRISPRCasFinder
ACTCCCCCGCGAGCGTTGTCCGGTACAACCTCTCAAACAACTAGCCCACAGAAGCCATACTCCCCCGCGAGCGTTGTCCGGT

>NC_013715|4|4|1292143-1292224|CRISPRCasFinder
ACTCCCCCGCGAGCGTTGTCCGGT	ACAACCTCTCAAACAACTAGCCCACAGAAGCCAT
ACTCCCCCGCGAGCGTTGTCCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_044150502.1\|1301879_1303151_-\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|274452
NC_013715.1\|WP_005506244.1\|1294983_1295460_-\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
NC_013715.1\|WP_012903635.1\|1283151_1284429_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NC_013715.1\|WP_012903633.1\|1277537_1278992_-\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|236126
NC_013715.1\|WP_044150495.1\|1289052_1290162_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NC_013715.1\|WP_012903637.1\|1285671_1286283_-\|response-regulator	unknown	unknown	gnl\|CDD\|226230
NC_013715.1\|WP_044150500.1\|1299214_1299946_-\|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl\|CDD\|377432
NC_013715.1\|WP_012903643.1\|1293073_1294684_-\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|184152
NC_013715.1\|WP_044150503.1\|1303814_1304840_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NC_013715.1\|WP_012903644.1\|1295515_1296352_-\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|238348
NC_013715.1\|WP_012903642.1\|1292243_1293059_-\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NC_013715.1\|WP_044150496.1\|1290342_1291761_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_013715.1\|WP_012903638.1\|1286721_1287624_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375902
NC_013715.1\|WP_012903636.1\|1284564_1285071_+\|hotdog-fold-thioesterase	unknown	unknown	gnl\|CDD\|161843
NC_013715.1\|WP_012903647.1\|1297903_1299214_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl\|CDD\|273015
NC_013715.1\|WP_044150498.1\|1296360_1297653_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	unknown	unknown	gnl\|CDD\|376420
NC_013715.1\|WP_005507475.1\|1303369_1303612_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NC_013715.1\|WP_012903634.1\|1279694_1282706_-\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|273160
NC_013715.1\|WP_005506231.1\|1285184_1285433_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_044150493.1\|1287781_1288828_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_044150502.1\|1301879_1303151_-\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NC_013715.1\|WP_012903635.1\|1283151_1284429_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	6.07732e-73
NC_013715.1\|WP_012903633.1\|1277537_1278992_-\|30S-ribosomal-protein-S1	gnl\|CDD\|236126	PRK07899, rpsA, 30S ribosomal protein S1; Reviewed.	0
NC_013715.1\|WP_044150495.1\|1289052_1290162_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	1.41809e-157
NC_013715.1\|WP_012903642.1\|1292243_1293059_-\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	3.08845e-124
NC_013715.1\|WP_012903637.1\|1285671_1286283_-\|response-regulator	gnl\|CDD\|226230	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms].	4.57374e-55
NC_013715.1\|WP_044150500.1\|1299214_1299946_-\|nicotinamide-mononucleotide-transporter	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	7.16755e-44
NC_013715.1\|WP_044150503.1\|1303814_1304840_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	2.69044e-138
NC_013715.1\|WP_012903644.1\|1295515_1296352_-\|GTP-cyclohydrolase-II	gnl\|CDD\|238348	cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the precursor molecule for the synthesis of the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) which are essential to cell metabolism. The enzyme is present in plants and numerous pathogenic bacteria, especially gram negative organisms, who are dependent on endogenous synthesis of the vitamin because they lack an appropriate uptake system. For animals and humans, which lack this biosynthetic pathway, riboflavin is the essential vitamin B2. GTP cyclohydrolase II requires magnesium ions for activity and has a bound catalytic zinc. The functionally active form is thought to be a homodimer. A paralogous protein is encoded in the genome of Streptomyces coelicolor, which converts GTP to 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (FAPy), an activity that has otherwise been reported for unrelated GTP cyclohydrolases III.	3.26564e-87
NC_013715.1\|WP_005506244.1\|1294983_1295460_-\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	1.73971e-63
NC_013715.1\|WP_012903643.1\|1293073_1294684_-\|anthranilate-synthase-component-I	gnl\|CDD\|184152	PRK13571, PRK13571, anthranilate synthase component I; Provisional.	0
NC_013715.1\|WP_012903638.1\|1286721_1287624_+\|hypothetical-protein	gnl\|CDD\|375902	pfam18476, PIN_8, PIN like domain. This is a domain of unknown function, suggested to be a member of PIN like domains clan.	4.40242e-14
NC_013715.1\|WP_012903636.1\|1284564_1285071_+\|hotdog-fold-thioesterase	gnl\|CDD\|161843	TIGR00369, Putative_esterase, uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.	1.10207e-25
NC_013715.1\|WP_012903647.1\|1297903_1299214_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl\|CDD\|273015	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD].	1.82279e-73
NC_013715.1\|WP_044150498.1\|1296360_1297653_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	gnl\|CDD\|376420	pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase. 3,4-Dihydroxy-2-butanone 4-phosphate is biosynthesized from ribulose 5-phosphate and serves as the biosynthetic precursor for the xylene ring of riboflavin. Sometimes found as a bifunctional enzyme with pfam00925.	5.27593e-112
NC_013715.1\|WP_005507475.1\|1303369_1303612_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.08266e-23
NC_013715.1\|WP_012903634.1\|1279694_1282706_-\|DNA-polymerase-I	gnl\|CDD\|273160	TIGR00593, DNA_polymerase_I, DNA polymerase I. All proteins in this family for which functions are known are DNA polymerases Many also have an exonuclease motif. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0
NC_013715.1\|WP_044150496.1\|1290342_1291761_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.53732e-55

>NC_013715.1|WP_044150496.1|1290342_1291761_+|MFS-transporter
MRNPAKTPPVFDPRTIDPNRVPTGLKVLIAASFMIAVGFGLVAPVLPNYAQNFNATVTMATMVVSALAITRLIFAPSAGQMITRWGERPVYTIGMLIVSVTSFMIAFAWDYWVLLGSRAVAGIGSVMFTVSAMGLLVRLSPAHMRGRISGYYATAFLLGNLLGPVIASALAPFGMRAPFIVYGFSLLAAGLIVWFLMPSQAALEAERDAIMEAAALAEGKGTGVLPSAAPSPANTQAGASAKAAKPAASGGAAGKSDLPAMTVRDALKFSNYRSALVSNWAIGWSVFGVQSSIIPLAAAYLATGGDMSDSVAGTLLASLAMATNSFGNALTQTFSGRFSDRFGRRVMAFSGLLLAGSAVTFMGFAPVAWVFVSLTACLGIGAAFMGPSIQAAVSDVIGTRRSGGQVLAVYQMCSDFGMILGPLVAGLIADAWGFVPAFIISGLLLVAAAFTWAPFRKARWPKDIADADYTGR
>NC_013715.1|WP_044150495.1|1289052_1290162_-|signal-recognition-particle-docking-protein-FtsY
MMIICAIVLGVLVIAGVLFAVLRRPKKTANLQSLRQEAAEASGGSAEEPESSAPRAIELDMPDPSAGRLVRLRARLARSNNMLGKGLLALLSRDRIDQDVWDEVEETLLLADLGSEPTTRLVEALQQRVRVEGTSNPAAVKKMLREELVKIVRPDMDRELKTAGSDGNPGVVLVVGVNGVGKTTTVGKIARVMVADGQTLLLGAADTFRAAASEQLTTWGDRVGVKTVRSEKEGADPASVAFDAVKAGKEQGVDTVLVDTAGRLQNKSGLMDQLGKIKRVIEKEAPVTEVLLVIDATTGQNGMVQAKVFGDIVDVTGIVLTKLDGTAKGGIVVAIQEELGVPVKLIGLGEGPDDLAPFDPEAFVDALLD
>NC_013715.1|WP_044150493.1|1287781_1288828_-|hypothetical-protein
MAATHLPGTLPDPNYQPTYRSNGAGDDLAALVAPYSLSRVQLAEATGIADEATVNSWVEQCCPELAADAPAPLEPVLRYLDETCLPDPANWPGDNAYDEYILENIAARMLARVVANTFAADRSGDYRELLALVATLVLIARYWEGTDEAFLTLLNAEPTAEAEESLQEAIANAPESLHPLLAELLLPALREARGTFTAAEAQLLTGYVLAAGYYAGEHPYETLNGIHVAFDADDLTLPDAELMSRVEDVLKANFSAARAGANTTDNPEPHYVTLPGDQDGYETAAHLIAALPQAHDVIAFSTPEGDNTETLAADRRAAFTLYLCYLMLGDDESSEGRAAELYRASREN
>NC_013715.1|WP_012903638.1|1286721_1287624_+|hypothetical-protein
MSITRQARTLYSDFVEYKELDRAPLTSIHPGILIAFDSTALASLYNYPTHISDEILRVYSQLRGHAFLPHQALKEFWAALDGASPVPAAADRVRSALASFKETLPEERNSPWSALRSVTHQLDHSIAQIMKILEPTTDTGSINMARREDDTILPRLNRIFTGHVGAAPSPERHEQQCREALAQGHPLLANASFDADFALWNQCVTEATTRVKGTDCVFVTGGVRDTWLRNGQQVRAASGKEPVRQLANRQLLREYTKATGGGVFRIYTVEEILRLASNQYGVTVSDATYSAIRAEQPVAV
>NC_013715.1|WP_012903637.1|1285671_1286283_-|response-regulator
MSELTTQDQAENQAPARTVVVAEDEALIRLDIVEILKDQGFDVVAETDNGKTAVELAQKYRPDLVLMDVKMPIMDGITAAEEIAKEQIAPVVLLTAFSQKELVDRAVEAGAMAYVVKPFSPNDLVPAIEVAISRYEQIRALEKEVGTIRDQFETRKLVDRAKSLLITKMNLTEPEAFRWIQKTSMDRRLSMREVSDTIIKQLS
>NC_013715.1|WP_005506231.1|1285184_1285433_+|hypothetical-protein
MARERTPYFKRYPKIVRAKRIVLPIAIGVMLVCLVTAINNPGSFWWLGVMLGTGGMLWAGSPTDRPISGPNNDEDDLNRYLR
>NC_013715.1|WP_012903636.1|1284564_1285071_+|hotdog-fold-thioesterase
MTENNTQHAPVRAAAPTTLTAEEIKAQLTESGIPEHLHPYFPRGLGELIPAMGIKFQELTAERTVATMPVAGNTQPIGLLHGGANVVLAETLGSLSAGVHGGEDLVAVGVDINATHVRPAVSGVVTATCTAVKLGRTLCIHSIDIVDERGRTTCTARITNMLIPRPTA
>NC_013715.1|WP_012903635.1|1283151_1284429_+|dicarboxylate/amino-acid:cation-symporter
MKALKKLPLLAWIIIAIASGVLIGLLTPGMISGINDATGAGIPTDLIVQLFVSFSTVFSAFLSFAIPLIIIGFIVPGIGSLAQGAGKMLGITVGLAYISSILAGFLALTCALLLYPIILKGQQLASFDNPENALSKGYISFELTPIMGVLSALILSFILGLGITALKTRAMLNLFEDFQVIVEKMLGYVIIPLLPVHIVGVFANMTLAGQVAKILSVFGLVFVMVIILHWVTLALQYSVAGAISRRNPIQMLKTMLPAYFTAIGTQSSAATIPVTVRSAKKAGISPRVVDFAIPLCATIHLSGSMITITSCSVAVLFMTGQHPDFGSLIPMILVLGVMMVAAPGVPGGGVMTAIGLLQSMLGFDASMIALMIALYLAQDSFGTATNVTGDATIATLTERISKAIGANPDKEIRDEDIEKAEAISA
>NC_013715.1|WP_012903634.1|1279694_1282706_-|DNA-polymerase-I
MTTENKTLLLIDGHSLALRSFFGIYTMAEKTGQHIFVRSDGQHTEAVHAFLSTLLSIIKDNQPSHIAVAFDLPGGTFRTAEYGEYKGGRNAIPEAFNGQIDLIKKMLGALNIPALTYENYEADDIVATLTRRGTEAGYKVLILSGDRDIFQLVTDDVTLLYPVTTGPSKGIQRMDPAAVEKKTKVPPHMYPDLAALTGEQADNLPGVPGVGPGFAAKWLGEYGSLQGVLDNRDKIGGKKGEALRENVDNVVRNRRLNQLVNDLDLNVTLEDTAFTPDLDALNTFFDEVEFRTIRKRAADTLGPIVRAAGSAGATSSAAEAGEEGAPKKAPTGPVYAPINTSAPTKNADAAAFRAFCSAAAEENYGTDEQGAPIAVPERLEGAVTLYPVTNLPVARPAIGDAPAVKVTKTKIRAAEENPELLGVLLTSKSTSLWIDTRTIDPELDAALAAWLSDEAARKIVMDLKVQRKLLRAYGYELAGAVEDPALSSYMCGFIPTATRKLFSERMEDLAERYLWIPKEPYAQLVFQPEEDEAEPSLFSLPGEAEPVDNLRYFTQISRIIHELARLLHYEMEEHGQLKVYEEIELPLLYVLADMEQAGIAVSDALLTELHDTFSARANQAQESARAIIGGEVATEDGEEPLNLASVKQLQTVLFETLGLPHTRKIKSGYSTDAESVTELLSKISPESDGAAFLGALAAYRDNIKLAQTVEGLQKAATEDGRVHTTFQQGAASTGRLSSTAPNLQNIPIRTEEGRRIRGAFIVAPEPIDGVEYEGLLTADYSQIEMRIMVHLAADEKLIAAYEAGEDLHRYVGSEVFGVAPEDVTPEQRSKVKAMSYGLAYGLSRFGLAKQLNISSDEAGELRTNYFKRFGRVGRFLRGVLKQAHQDGYTETIFGRRRVLPDLDSPNRVRREAAERAALNAPIQGTAADIIKIAMINIHRRLREEGLKTRMLLQVHDEIILEVATGEREAAERVLVEEMSGAASLRVPLDVQVGWGKSWQEAGH
>NC_013715.1|WP_012903633.1|1277537_1278992_-|30S-ribosomal-protein-S1
MSTNIPQVAINDIGDEQAFLEAVEQTIKVFNDGDLVSGQVVKIDHDEVLLDIGYKTEGVIPSRELSIKHDIDPSEVVELGSEVEALVLTKEDKEGRLILSKKRAQYERAWGDIEKVKENDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQQIEAKIIELDKNRNNVVLSRRAYLEETQSAVRSSFLNELEKGQVREGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVGQPVTVEVLEVDLDRERVSLSLKATQEDPWQAFARTHALGQIVPGKVTKLVPFGAFVRVEDGIEGLVHISELATRHVDLAEQVVSVGEEVFVKIIDIDMDRRRISLSLKQANEGVDPNATEFDPALYGMAAEYDEAGNYKYPEGFDPEANEWLEGFDAQREAWEAQYAEAQARFEAHKVQVAKALEADAEAAAAAPAAAEPAPTSYSSEEPASAGTLASDEALAELRKKLTGN
>NC_013715.1|WP_012903642.1|1292243_1293059_-|indole-3-glycerol-phosphate-synthase-TrpC
MSTVLDEIIVGVREDLAARVQQVPLEEMKKRALAAAPARDALASLRGEVPGGGNGATARIISEVKRSSPSKGALGEIPDPAALAARYEAGGAAAISVLTEQRRFNGSLADLDAVRAAVNIPVLRKDFTVDEYQIWEARAHGADLVLLIVAALDEQTLREFLELTESLGMNALVETHTPEEIEVAQRIGAKIVGINVRNLKTLEVNNEHYASLAAHLPDSVIKVAESGVASIEDVRAYAGAGADAILIGEALVRSGDPEGTVREFSKVPVTR
>NC_013715.1|WP_012903643.1|1293073_1294684_-|anthranilate-synthase-component-I
MQDLGTITPSLEEFRARAAGTRVIPVHIKILADSLTPIGIYRSLVLQNDQGEPVEAAHGTFLLESAKISAEGESAAWDRYSFIGASSRSTLTTVDGAVHWQGRTPAGAPVDGDPVEAIAKTLQMLYTEPDPSLPPLTSGLVGYLGWDVVRHWEHLPFPPADDVNLPEFALNMVSDMAIHDNKDGTVLLVANAINFNGTSENVDDAYEDAVARLHSMLRRLQRGATATTSTLSGVADVDRKVREDVTLTWSEQGFKDAIDRSKKNIIDGDVFQIVLSRRFEAETNAKALDVYRVLRQSNPSPYMYLFNFEDSNGTPFHIVGSSPEALVTLKDGIASTHPIAGSRPRGATREEDLALAEELLADQKERSEHLMLVDLARNDLSRIAKPGTVSVDQFMIIERFSHIMHISSAVSAELDPQFSAYDVLRVAFPAGTLSGAPKPRAMQLIDEYEPTRRGVYGGVCGYFDFAGNMDMAIAIRTAVLKEGTAYVQAGAGLVMDSNPDSETLETVNKSAAPLRAVLTASGLAPLDADAAVNATK
>NC_013715.1|WP_005506244.1|1294983_1295460_-|6,7-dimethyl-8-ribityllumazine-synthase
MSGVGAADTTLNPEDYKGFKLAIVAASWHTQVMDGLIDGAQRAARDAGIEPTLVRVPGTFELPVAATRLAEKFDAIVALGVVIRGGTPHFDYVCQGATNGLTDVSVLTGRPIGFGVLTCDNEQQALDRAGLEGSNEDKGYEATAAALQTAATLKQFSN
>NC_013715.1|WP_012903644.1|1295515_1296352_-|GTP-cyclohydrolase-II
MSETPNTQATPGTPAELSTPAAVTLAEPGTPSADTLVESVEAQVEELSAESLRIASQLAEGYRVSPLDMVPNPSPLLVESTEEVAVPTPQGLFGLRAWRFADGAEHISARALDRDGTPVPAEDGGALAVRIHSECATGDIFGSFRCDCGPQLENGLRIIGRTGGYLIYVRNHEGRGIGLVNKLRAYALQDAGLDTLDANLALGLDGDMRDYSQAALILQELGVNELRLVTNNPAKQEALESLGLQVTELIPDEIPARVENAHYLQTKRERMRHVLKSA
>NC_013715.1|WP_044150498.1|1296360_1297653_-|3,4-dihydroxy-2-butanone-4-phosphate-synthase
MFTGIIGALGTVESITPIEGSDAAYLTLNAGDIVADLEHGGSLAVNGVCLTAIDLDQLQPGQFRAYAMGETLRRTNLGNLNPGDTVNLERCLPAGGRLDGHVVQGHVDAVGTLASVTAHEAWSTLRFNLPTELAPLLAEKGSIAVSGVSLTVTAVSAPGETPAWFEVGLIPETLKATNLGALKVGDSVNLETDALAKYVQRLTAFAGVPQADSAHSGEQVAPRRADAASVLDSVQTAVDAIAAGRAVVVVDDEDRENEGDIIFAAEHATPELMGFMIRYTSGVVCAPLSNKRADEMKLPPMVTNNEDPKGTAYTVSCDAASGVSTGISAADRARTVQILADASSTPADITRPGHIFPLRAVDGGVAERPGHTEAAVELSLAAGLSGVGVIAEVVHDDGSMMRFDALRAFATEHNLPMISIEDLIKYVAKA
>NC_013715.1|WP_012903647.1|1297903_1299214_-|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MSQNPSLQVLANAHLPVTIAPSVSSPRNDADYSAAEYGHLAGLPAARTLQLPGPEQELSHAEAMTLALQAARQGIRGANPLVGAVITDAHGHLLHVGYHRGAGTPHAEADALAAARAAGTDLTGARMYVSLEPCNHTGRTGPCSHAVAEAGISELYYAYSDDTENAAGGAAYLRSQGVTVHAMEEFANASYQLNERWFIAAAERRPFITAKSASTLDGFIAAADGTSKWITGPAARIDGHLIRHRADAVMIGTRTTLMDDPTLDARDANGERFEKQPLRVVMGKTEITENYRVRGLNPPEGVEADPQNFLQVFTHDPRELLDELYARGVRHLMIEGGPGMVGLFAGEDFIDEMVWYRAPMIMGQGKSAVYRLLVDTLAQAPRLQLDDLGMFPAVRVLGNDTATHLVPAPRGTAQEPGERRTLPKLDACHAPEPRLD
>NC_013715.1|WP_044150500.1|1299214_1299946_-|nicotinamide-mononucleotide-transporter
MDILRWLFDAQIHVGDQSLLVREVLGNAFGLASALGGMRRKVWAWPVGILGNLLLLTVFLGALVGSPHPVTMLGQAGRQIMFIAVSIWGWHRWRATRAAGGDASEGAAVIPKWATNTERAGLVVAMVAGTLLLTPIFRALGSYEPVWSDAWIFTGSLLATYGMARGWVEFWLIWVAVDLVGVPLLWSAGYYATSFMYVFYGCFTLVGFFVWWRTRNLEAQKTRVQTQFPDVTVEVTDVKKGRA
>NC_013715.1|WP_044150502.1|1301879_1303151_-|beta-ketoacyl-ACP-synthase-II
MSRKVLVTGLGATTPIGGDVPTTWENATKGVSGVSTLDHPWVKEYDLPVYIAGQLAVPALESGRLTKVEAKRLDPSGQLALIAAREAWEDAGFSGPDAESAEEVDPERTGVAFGTGIGGVWTLLDAWDTLREKGPRRVLPMTVPMLMPNGNAAAVSMNLKARAAAQTVVSACASSTEAMQLGAEMIRSGKADVVIVGGAEAAIHPLPMAAFAKMQALSSRNDEPEKASRPYDVDRDGFVMGEGAAALILESEEHAKARGARVYAELAGTGVSADSYHITAPDPAALGATRALREALEDGNIDPKTVVHINAHATSTPAGDLPEATAMHETFGEHTKNIAVSATKSMTGHLLGGAGALEAVLTVLALHHRTAPCTINLDNKDPQIDLDVVTEARELPAGEIVALSNSFGFGGHNAVVAFRSVEG
>NC_013715.1|WP_005507475.1|1303369_1303612_-|acyl-carrier-protein
MANKEEILAGLAEIVNEETGVEVEDVQLDKSFTEDLDIDSISMMTIVVNAEEKFEVTIPDEEVKNLKTVGDAVEFIANAA
>NC_013715.1|WP_044150503.1|1303814_1304840_-|ketoacyl-ACP-synthase-III
MTTLKQYEINRYSRILGYGAARGEVIVPNDDIVEAINSSDEWIKQRTGIATRHRASENQSVADLAIGAAKDALAASGVAGEDIEAVIISTISHPYATPSLATLVADAIGSKCPAYDISAACAGFCYGIAQADALVRAGTAKHVLVIGVEKLSDFIDNTERTISFLLGDGAGAAVVGVSDEPGIAPTVWGSDGSRWGTVGMTHSLLDIRNRDFVANPVQEGEKIWPTLRQDGPSVFRWAVWEMAKVAKQALETAGITPDELGALIPHQANARIIDQMVKTLKLPDTVAVARDIVDAGNTSAASVPLAAHRLLKENPELSGKFALQIGFGAGLAFAAQVVVLP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_5

1301586-1301674

Orphan

Consensus_repeat	Method
GCACTCCCCCGCGAGCGGCGTCCGGTATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013715_5

>merge|NC_013715|5|1301586-1301674|CRISPRCasFinder
GCACTCCCCCGCGAGCGGCGTCCGGTATGCACTTTCCAAACAACTAACCCACGGAAGCCGCACTCCCCCGCGAGCGGCGTCCGGTATGC

>NC_013715|5|5|1301586-1301674|CRISPRCasFinder
GCACTCCCCCGCGAGCGGCGTCCGGTATGC	ACTTTCCAAACAACTAACCCACGGAAGCC
GCACTCCCCCGCGAGCGGCGTCCGGTATGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_044150502.1\|1301879_1303151_-\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|274452
NC_013715.1\|WP_044150505.1\|1307452_1309249_-\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|376794
NC_013715.1\|WP_044150504.1\|1306108_1307212_-\|tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|234698
NC_013715.1\|WP_012903655.1\|1309327_1310866_-\|YifB-family-Mg-chelatase-like-AAA-ATPase	unknown	unknown	gnl\|CDD\|223679
NC_013715.1\|WP_044150495.1\|1289052_1290162_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NC_013715.1\|WP_012903642.1\|1292243_1293059_-\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NC_013715.1\|WP_005506259.1\|1311650_1311977_-\|DUF2469-domain-containing-protein	unknown	unknown	gnl\|CDD\|313765
NC_013715.1\|WP_044150500.1\|1299214_1299946_-\|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl\|CDD\|377432
NC_013715.1\|WP_044150503.1\|1303814_1304840_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NC_013715.1\|WP_012903644.1\|1295515_1296352_-\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|238348
NC_013715.1\|WP_005506244.1\|1294983_1295460_-\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
NC_013715.1\|WP_012903643.1\|1293073_1294684_-\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|184152
NC_013715.1\|WP_005507477.1\|1304957_1305857_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NC_013715.1\|WP_044150498.1\|1296360_1297653_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	unknown	unknown	gnl\|CDD\|376420
NC_013715.1\|WP_012903647.1\|1297903_1299214_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl\|CDD\|273015
NC_013715.1\|WP_044150990.1\|1310865_1311264_-\|YraN-family-protein	unknown	unknown	gnl\|CDD\|237119
NC_013715.1\|WP_044150496.1\|1290342_1291761_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NC_013715.1\|WP_005507475.1\|1303369_1303612_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NC_013715.1\|WP_052265076.1\|1312075_1312903_-\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|260003
NC_013715.1\|WP_044150493.1\|1287781_1288828_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_044150502.1\|1301879_1303151_-\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NC_013715.1\|WP_044150505.1\|1307452_1309249_-\|DNA-protecting-protein-DprA	gnl\|CDD\|376794	pfam02481, DNA_processg_A, DNA recombination-mediator protein A. The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyze the homology-dependent formation of joint molecules. While the E.coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation.	6.32303e-80
NC_013715.1\|WP_044150504.1\|1306108_1307212_-\|tyrosine-recombinase-XerC	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	1.78061e-112
NC_013715.1\|WP_012903655.1\|1309327_1310866_-\|YifB-family-Mg-chelatase-like-AAA-ATPase	gnl\|CDD\|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	0
NC_013715.1\|WP_044150495.1\|1289052_1290162_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	1.41809e-157
NC_013715.1\|WP_012903642.1\|1292243_1293059_-\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	3.08845e-124
NC_013715.1\|WP_005506259.1\|1311650_1311977_-\|DUF2469-domain-containing-protein	gnl\|CDD\|313765	pfam10611, DUF2469, Protein of unknown function (DUF2469). Member proteins often found in Actinomycetes clustered with signal peptidase and/or RNAse-HII.	1.63753e-53
NC_013715.1\|WP_044150500.1\|1299214_1299946_-\|nicotinamide-mononucleotide-transporter	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	7.16755e-44
NC_013715.1\|WP_044150503.1\|1303814_1304840_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	2.69044e-138
NC_013715.1\|WP_012903644.1\|1295515_1296352_-\|GTP-cyclohydrolase-II	gnl\|CDD\|238348	cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the precursor molecule for the synthesis of the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) which are essential to cell metabolism. The enzyme is present in plants and numerous pathogenic bacteria, especially gram negative organisms, who are dependent on endogenous synthesis of the vitamin because they lack an appropriate uptake system. For animals and humans, which lack this biosynthetic pathway, riboflavin is the essential vitamin B2. GTP cyclohydrolase II requires magnesium ions for activity and has a bound catalytic zinc. The functionally active form is thought to be a homodimer. A paralogous protein is encoded in the genome of Streptomyces coelicolor, which converts GTP to 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (FAPy), an activity that has otherwise been reported for unrelated GTP cyclohydrolases III.	3.26564e-87
NC_013715.1\|WP_005506244.1\|1294983_1295460_-\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	1.73971e-63
NC_013715.1\|WP_012903643.1\|1293073_1294684_-\|anthranilate-synthase-component-I	gnl\|CDD\|184152	PRK13571, PRK13571, anthranilate synthase component I; Provisional.	0
NC_013715.1\|WP_005507477.1\|1304957_1305857_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.03458e-75
NC_013715.1\|WP_044150498.1\|1296360_1297653_-\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	gnl\|CDD\|376420	pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase. 3,4-Dihydroxy-2-butanone 4-phosphate is biosynthesized from ribulose 5-phosphate and serves as the biosynthetic precursor for the xylene ring of riboflavin. Sometimes found as a bifunctional enzyme with pfam00925.	5.27593e-112
NC_013715.1\|WP_012903647.1\|1297903_1299214_-\|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl\|CDD\|273015	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD].	1.82279e-73
NC_013715.1\|WP_044150496.1\|1290342_1291761_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.53732e-55
NC_013715.1\|WP_044150990.1\|1310865_1311264_-\|YraN-family-protein	gnl\|CDD\|237119	PRK12497, PRK12497, YraN family protein.	2.3914e-33
NC_013715.1\|WP_052265076.1\|1312075_1312903_-\|ribonuclease-HII	gnl\|CDD\|260003	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like. This family includes mostly bacterial type 2 RNases H, with some eukaryotic members. Bacterial RNase HII has a role in primer removal based on its involvement in ribonucleotide-specific catalytic activity in the presence of RNA/DNA hybrid substrates. Several bacteria, such as Bacillus subtilis, have two different type II RNases H, RNases HII and HIII; double deletion of these leads to cellular lethality. It appears that type I and type II RNases H also have overlapping functions in cells, as over-expression of Escherichia coli RNase HII can complement an RNase HI deletion phenotype. In Leishmania mitochondria, of the four distinct RNase H genes (H1, HIIA, HIIB, HIIC), HIIC is essential for the survival of the parasite and thus can be a potential target for anti-leishmanial chemotherapy. Ribonuclease H (RNase H) is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication and repair.	2.29304e-76
NC_013715.1\|WP_005507475.1\|1303369_1303612_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.08266e-23

>NC_013715.1|WP_044150500.1|1299214_1299946_-|nicotinamide-mononucleotide-transporter
MDILRWLFDAQIHVGDQSLLVREVLGNAFGLASALGGMRRKVWAWPVGILGNLLLLTVFLGALVGSPHPVTMLGQAGRQIMFIAVSIWGWHRWRATRAAGGDASEGAAVIPKWATNTERAGLVVAMVAGTLLLTPIFRALGSYEPVWSDAWIFTGSLLATYGMARGWVEFWLIWVAVDLVGVPLLWSAGYYATSFMYVFYGCFTLVGFFVWWRTRNLEAQKTRVQTQFPDVTVEVTDVKKGRA
>NC_013715.1|WP_012903647.1|1297903_1299214_-|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MSQNPSLQVLANAHLPVTIAPSVSSPRNDADYSAAEYGHLAGLPAARTLQLPGPEQELSHAEAMTLALQAARQGIRGANPLVGAVITDAHGHLLHVGYHRGAGTPHAEADALAAARAAGTDLTGARMYVSLEPCNHTGRTGPCSHAVAEAGISELYYAYSDDTENAAGGAAYLRSQGVTVHAMEEFANASYQLNERWFIAAAERRPFITAKSASTLDGFIAAADGTSKWITGPAARIDGHLIRHRADAVMIGTRTTLMDDPTLDARDANGERFEKQPLRVVMGKTEITENYRVRGLNPPEGVEADPQNFLQVFTHDPRELLDELYARGVRHLMIEGGPGMVGLFAGEDFIDEMVWYRAPMIMGQGKSAVYRLLVDTLAQAPRLQLDDLGMFPAVRVLGNDTATHLVPAPRGTAQEPGERRTLPKLDACHAPEPRLD
>NC_013715.1|WP_044150498.1|1296360_1297653_-|3,4-dihydroxy-2-butanone-4-phosphate-synthase
MFTGIIGALGTVESITPIEGSDAAYLTLNAGDIVADLEHGGSLAVNGVCLTAIDLDQLQPGQFRAYAMGETLRRTNLGNLNPGDTVNLERCLPAGGRLDGHVVQGHVDAVGTLASVTAHEAWSTLRFNLPTELAPLLAEKGSIAVSGVSLTVTAVSAPGETPAWFEVGLIPETLKATNLGALKVGDSVNLETDALAKYVQRLTAFAGVPQADSAHSGEQVAPRRADAASVLDSVQTAVDAIAAGRAVVVVDDEDRENEGDIIFAAEHATPELMGFMIRYTSGVVCAPLSNKRADEMKLPPMVTNNEDPKGTAYTVSCDAASGVSTGISAADRARTVQILADASSTPADITRPGHIFPLRAVDGGVAERPGHTEAAVELSLAAGLSGVGVIAEVVHDDGSMMRFDALRAFATEHNLPMISIEDLIKYVAKA
>NC_013715.1|WP_012903644.1|1295515_1296352_-|GTP-cyclohydrolase-II
MSETPNTQATPGTPAELSTPAAVTLAEPGTPSADTLVESVEAQVEELSAESLRIASQLAEGYRVSPLDMVPNPSPLLVESTEEVAVPTPQGLFGLRAWRFADGAEHISARALDRDGTPVPAEDGGALAVRIHSECATGDIFGSFRCDCGPQLENGLRIIGRTGGYLIYVRNHEGRGIGLVNKLRAYALQDAGLDTLDANLALGLDGDMRDYSQAALILQELGVNELRLVTNNPAKQEALESLGLQVTELIPDEIPARVENAHYLQTKRERMRHVLKSA
>NC_013715.1|WP_005506244.1|1294983_1295460_-|6,7-dimethyl-8-ribityllumazine-synthase
MSGVGAADTTLNPEDYKGFKLAIVAASWHTQVMDGLIDGAQRAARDAGIEPTLVRVPGTFELPVAATRLAEKFDAIVALGVVIRGGTPHFDYVCQGATNGLTDVSVLTGRPIGFGVLTCDNEQQALDRAGLEGSNEDKGYEATAAALQTAATLKQFSN
>NC_013715.1|WP_012903643.1|1293073_1294684_-|anthranilate-synthase-component-I
MQDLGTITPSLEEFRARAAGTRVIPVHIKILADSLTPIGIYRSLVLQNDQGEPVEAAHGTFLLESAKISAEGESAAWDRYSFIGASSRSTLTTVDGAVHWQGRTPAGAPVDGDPVEAIAKTLQMLYTEPDPSLPPLTSGLVGYLGWDVVRHWEHLPFPPADDVNLPEFALNMVSDMAIHDNKDGTVLLVANAINFNGTSENVDDAYEDAVARLHSMLRRLQRGATATTSTLSGVADVDRKVREDVTLTWSEQGFKDAIDRSKKNIIDGDVFQIVLSRRFEAETNAKALDVYRVLRQSNPSPYMYLFNFEDSNGTPFHIVGSSPEALVTLKDGIASTHPIAGSRPRGATREEDLALAEELLADQKERSEHLMLVDLARNDLSRIAKPGTVSVDQFMIIERFSHIMHISSAVSAELDPQFSAYDVLRVAFPAGTLSGAPKPRAMQLIDEYEPTRRGVYGGVCGYFDFAGNMDMAIAIRTAVLKEGTAYVQAGAGLVMDSNPDSETLETVNKSAAPLRAVLTASGLAPLDADAAVNATK
>NC_013715.1|WP_012903642.1|1292243_1293059_-|indole-3-glycerol-phosphate-synthase-TrpC
MSTVLDEIIVGVREDLAARVQQVPLEEMKKRALAAAPARDALASLRGEVPGGGNGATARIISEVKRSSPSKGALGEIPDPAALAARYEAGGAAAISVLTEQRRFNGSLADLDAVRAAVNIPVLRKDFTVDEYQIWEARAHGADLVLLIVAALDEQTLREFLELTESLGMNALVETHTPEEIEVAQRIGAKIVGINVRNLKTLEVNNEHYASLAAHLPDSVIKVAESGVASIEDVRAYAGAGADAILIGEALVRSGDPEGTVREFSKVPVTR
>NC_013715.1|WP_044150496.1|1290342_1291761_+|MFS-transporter
MRNPAKTPPVFDPRTIDPNRVPTGLKVLIAASFMIAVGFGLVAPVLPNYAQNFNATVTMATMVVSALAITRLIFAPSAGQMITRWGERPVYTIGMLIVSVTSFMIAFAWDYWVLLGSRAVAGIGSVMFTVSAMGLLVRLSPAHMRGRISGYYATAFLLGNLLGPVIASALAPFGMRAPFIVYGFSLLAAGLIVWFLMPSQAALEAERDAIMEAAALAEGKGTGVLPSAAPSPANTQAGASAKAAKPAASGGAAGKSDLPAMTVRDALKFSNYRSALVSNWAIGWSVFGVQSSIIPLAAAYLATGGDMSDSVAGTLLASLAMATNSFGNALTQTFSGRFSDRFGRRVMAFSGLLLAGSAVTFMGFAPVAWVFVSLTACLGIGAAFMGPSIQAAVSDVIGTRRSGGQVLAVYQMCSDFGMILGPLVAGLIADAWGFVPAFIISGLLLVAAAFTWAPFRKARWPKDIADADYTGR
>NC_013715.1|WP_044150495.1|1289052_1290162_-|signal-recognition-particle-docking-protein-FtsY
MMIICAIVLGVLVIAGVLFAVLRRPKKTANLQSLRQEAAEASGGSAEEPESSAPRAIELDMPDPSAGRLVRLRARLARSNNMLGKGLLALLSRDRIDQDVWDEVEETLLLADLGSEPTTRLVEALQQRVRVEGTSNPAAVKKMLREELVKIVRPDMDRELKTAGSDGNPGVVLVVGVNGVGKTTTVGKIARVMVADGQTLLLGAADTFRAAASEQLTTWGDRVGVKTVRSEKEGADPASVAFDAVKAGKEQGVDTVLVDTAGRLQNKSGLMDQLGKIKRVIEKEAPVTEVLLVIDATTGQNGMVQAKVFGDIVDVTGIVLTKLDGTAKGGIVVAIQEELGVPVKLIGLGEGPDDLAPFDPEAFVDALLD
>NC_013715.1|WP_044150493.1|1287781_1288828_-|hypothetical-protein
MAATHLPGTLPDPNYQPTYRSNGAGDDLAALVAPYSLSRVQLAEATGIADEATVNSWVEQCCPELAADAPAPLEPVLRYLDETCLPDPANWPGDNAYDEYILENIAARMLARVVANTFAADRSGDYRELLALVATLVLIARYWEGTDEAFLTLLNAEPTAEAEESLQEAIANAPESLHPLLAELLLPALREARGTFTAAEAQLLTGYVLAAGYYAGEHPYETLNGIHVAFDADDLTLPDAELMSRVEDVLKANFSAARAGANTTDNPEPHYVTLPGDQDGYETAAHLIAALPQAHDVIAFSTPEGDNTETLAADRRAAFTLYLCYLMLGDDESSEGRAAELYRASREN
>NC_013715.1|WP_044150502.1|1301879_1303151_-|beta-ketoacyl-ACP-synthase-II
MSRKVLVTGLGATTPIGGDVPTTWENATKGVSGVSTLDHPWVKEYDLPVYIAGQLAVPALESGRLTKVEAKRLDPSGQLALIAAREAWEDAGFSGPDAESAEEVDPERTGVAFGTGIGGVWTLLDAWDTLREKGPRRVLPMTVPMLMPNGNAAAVSMNLKARAAAQTVVSACASSTEAMQLGAEMIRSGKADVVIVGGAEAAIHPLPMAAFAKMQALSSRNDEPEKASRPYDVDRDGFVMGEGAAALILESEEHAKARGARVYAELAGTGVSADSYHITAPDPAALGATRALREALEDGNIDPKTVVHINAHATSTPAGDLPEATAMHETFGEHTKNIAVSATKSMTGHLLGGAGALEAVLTVLALHHRTAPCTINLDNKDPQIDLDVVTEARELPAGEIVALSNSFGFGGHNAVVAFRSVEG
>NC_013715.1|WP_005507475.1|1303369_1303612_-|acyl-carrier-protein
MANKEEILAGLAEIVNEETGVEVEDVQLDKSFTEDLDIDSISMMTIVVNAEEKFEVTIPDEEVKNLKTVGDAVEFIANAA
>NC_013715.1|WP_044150503.1|1303814_1304840_-|ketoacyl-ACP-synthase-III
MTTLKQYEINRYSRILGYGAARGEVIVPNDDIVEAINSSDEWIKQRTGIATRHRASENQSVADLAIGAAKDALAASGVAGEDIEAVIISTISHPYATPSLATLVADAIGSKCPAYDISAACAGFCYGIAQADALVRAGTAKHVLVIGVEKLSDFIDNTERTISFLLGDGAGAAVVGVSDEPGIAPTVWGSDGSRWGTVGMTHSLLDIRNRDFVANPVQEGEKIWPTLRQDGPSVFRWAVWEMAKVAKQALETAGITPDELGALIPHQANARIIDQMVKTLKLPDTVAVARDIVDAGNTSAASVPLAAHRLLKENPELSGKFALQIGFGAGLAFAAQVVVLP
>NC_013715.1|WP_005507477.1|1304957_1305857_-|ACP-S-malonyltransferase
MRALVCPGQGSQKKGFLSPWLEIEGVREHLERLSEAAGIDLIHYGTEAEEETIKDTAIAQPLIVAAGIVTGRLALRELDGEELIFAGHSVGEITAAALAGVLSDEDAMRFVRVRANGMAEAAAASPTGMAAVLGGVEENVREAIDAAGLVAANSNGGGQIVAAGPIPAIEAFAANPPARARVIPLKVAGAFHTEAMAPAVPALEEFAASLQVSDPTSALLTNRDGSAVASGEEFVKTLVSQVTSPVRWDLCMATLLEREVAGIIEVAPAGTLVGLAKRAMRGVPGTSINTPEDLASLKG
>NC_013715.1|WP_044150504.1|1306108_1307212_-|tyrosine-recombinase-XerC
MTPARQPENRAENRNENREEYRDEAPSTTLPVTYTRTLAPEQVESSALPDSALPESALGVSGEVFRPVLDRFERFLRYEKHRSEETIRSYISDLEGFFGYMARRGVRHLDSIDASLIREWLGSLHLRQAARSTVVRRGSTLRTFFTWAQEEELVHANPTRGMRTPKRESHLPPVLSREQMNQLLTTLQERRAQDPRDARLLRLEAVVEVLYASGMRISELTGLDLQSVDRANKTVRVLGKGNKERVVPLGTPALKALNRWVSYGRPQWIPEGSQGVTALFIGPRGGRANARQIREDLTRLLRTVENTQASGAHVLRHSAATHLVDGGADIRSVQELLGHSSLATTQIYTHVSMKRLAETYARAHPRA
>NC_013715.1|WP_044150505.1|1307452_1309249_-|DNA-protecting-protein-DprA
MSEKKLRKRAEKADLQENGLKETAPQERVPEEHVPEELVAEDFVQEELQIRLPGCTLDAHALVRERVAHILSLGQEPSPSPYNAARLPGFLASCLNPVYLEENHLKETNQQDLSREEQPGEELQGVHPEAPAGTASSSSDPAPLLNPAPLFNPALSAEQLEAACREYIRCCTAQLMRYAEPADELVVESLTSLGAPLTLHYLLTGHIPDEHTWEHGEPDTQLSDFLHSVGTPAEGESALFCSANGYYTPGEHQMSRDKFDKALATRRLRWNRRMERTLNAEAHMAATCGAWLVTPADPLWPPQLNDLGPARPYGLWCRGDSRHLLDVASAPSVALVGSRDPSIYGTEATTHLAAELARRGYTVISGGAMGIDIAAHRAALTQQSSDLPTIAFMAGGLDRLYPAQNSDALNMIVDRGLIMSEVSVGNTPTRWRFLERNRLIAALARHTIVVEARWRSGALNTARHAMEIGRTLWAVPGQINSPNSVGTNRLLRDGLAQTLTEAADILEYDAAAGFELGTEHESEWDQAASSSALDELTERQGRVWDDLSPRSYRGVDEIAAALGLSARDVMADLFHLGRCGLAESSGTSWRKVRPAVAA
>NC_013715.1|WP_012903655.1|1309327_1310866_-|YifB-family-Mg-chelatase-like-AAA-ATPase
MGFARTYSVALVGLRGHIVDVEADISQGLPGFVLLGLPDTALNESKERVRSAAKNTGITLTQHRLTVNLTPATLPKRGSAFDLAIVVAALQAEKKLHPSGDSVFLGELGLDGTLRPVPGILPAVKAAVDAGHHRVIVPAENAEEAALIPGAQVSGFRCLAEVFAALGAESQKLTYPPAPQTEASAPVAKPTEIPSDMSDVAGQSQGRFALEIAAAGGHHMLLTGPPGSGKTMLAERLPSILPTLDNDAAMEVTAIRSLCSAGEHLSELVRQPPFEAPHHSASAPAILGGGSGIPRPGCVSKAHRGVLFLDEAPEFKRTVLDSLRQPLESGTVTLDRSSASATYPARFQLILAANPCPCGMNVGTGTECTCAPRERRAYFGRLSGPLVDRIDVNVTVPKVSSTELAGGQVNESSAQIRERVMAARQAQKERLEPYGLKTNAEMNGKILRGPLRLDAKLTGELNAAVDRGMLTARGYDRVLRIAWTLADLEGAAYPSREHLDVALFLRQQGQLK
>NC_013715.1|WP_044150990.1|1310865_1311264_-|YraN-family-protein
MLRRTSPRAHSVGRWGEELTARILETNGYRILERNWRPPAGLEHEQIRGELDLIAIDPEDELVFVEVKTRSSEDFGHPFASIDRDKARRTRSLAILWCRLRENLDFPRFRIDAIAVTGTCETFTFEHLKAVA
>NC_013715.1|WP_005506259.1|1311650_1311977_-|DUF2469-domain-containing-protein
MSAEDLENYETDAQMALYREYKDVMSLFSYAVETDRRFYLANQVDVTPHVQDGTLYFEVSMSDVWVWDVFRSNRFVKKVHAYSVRDVNVEERLPNQEFTVPEMPDFNA
>NC_013715.1|WP_052265076.1|1312075_1312903_-|ribonuclease-HII
MVSAQKSATKPAQAKPVKATPPAADLEYEQQLFASGARTVAGIDEVGRGSMAGPVTVGVAILTPDATLEVGGLIDSKALSPARRESMVPEIRQWCAVAVGHVEPADIDRLGMTLSLRLAAQRALAELARRGYRADAALLDGKHDWFTPPQEDLFSALAPDPAQAHYNALLAQAWEGAGEGGAGEPAQMPVTMVIKGDYKCASIAAASVVAKVERDELMVQLDTRYPGYGWAKNKGYGSAAHREAISVQGPSPQHRLSWSLPATAEQIEAAAAQRG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_6

1376010-1376758

Unclear

Consensus_repeat	Method
CCTCAATGAAAGTCCCCGCCCGAA	CRISPRCasFinder
CCTCAATGAAAGTCCCCNCCCGAANGC	CRT
CCTCAATGAAAGTCCCCGCCCGAAGGCGGGGAAAT	PILER-CR

10 spacers

csb1gr7,csb2gr5,cas3,csb3,cas2,cas1

The CRISPR arrays of NC_013715_6

>merge|NC_013715|6|1376010-1376758|CRISPRCasFinder,CRT,PILER-CR
TCTCAATGAAAGTCCCCACCCGAAGGCAGGGAAATCGGGGTAAGCCCAAGGTGCATAGGCTTAAAGTTTTTGCCTCAATGAAAGTCCCCGCCCGAAGGCGGGGAAATGTCAGCGGCACGCTCGGCGGTGGTTTCTTCCGGTTCCGCCTCAATGAAAGTCCCCGCCCGAAGGCGGGGAAATGCGGGTCGACGGCGGCGATTTCACGGGCGGACTTATTGCCTCAATGAAAGTCCCCGCCCGAAGGCAGGGAAATGCTGTATTCAAGGATTCGGCGGATAAGATGCACGCGCCTCAATGAAAGTCCCCACCCTAAAGCGGGGAAATCCAGCCGATGATGCGGCGCGGCGGCTCATGGCTCCCACCTCAATGAAAGTCCCTGCCCGAAGACGGGGAAATCCGTACCGCGTGCATCAGGGTTATCAGAATCCCAGGTGCCTCAATGAAAGTCCCCGCCCGAAGGCGGGGAAATCCGCCGACACCGAGGTAGACTCCCCGGCACTTGGCTAGCCTCAATGAAAGTCCCCACCCGAAAGCGGGGAAATCGCTGACCTGACTCAGCTACTGAACACGTTCAAGACACCTCAATGAAAGTCCCCGCCCGAAGGCAGGGAAATTAAGAAGAGGGTTTCGCCCGAGTCCACGCGCTGCATGCCTCAATGAAAGTCCCCGCCTGAAAGCAGGGAAATGGGCCTGCGTGAAGCCAGGACGTGACAAATTGCTTGCCTCAATGAAAGTCCCCCGCCCGAAGG

>NC_013715|6|6|1376010-1376755|CRISPRCasFinder
TCTCAATGAAAGTCCCCACCCGAA	GGCAGGGAAATCGGGGTAAGCCCAAGGTGCATAGGCTTAAAGTTTTTG
CCTCAATGAAAGTCCCCGCCCGAA	GGCGGGGAAATGTCAGCGGCACGCTCGGCGGTGGTTTCTTCCGGTTCCG
CCTCAATGAAAGTCCCCGCCCGAA	GGCGGGGAAATGCGGGTCGACGGCGGCGATTTCACGGGCGGACTTATTG
CCTCAATGAAAGTCCCCGCCCGAA	GGCAGGGAAATGCTGTATTCAAGGATTCGGCGGATAAGATGCACGCG
CCTCAATGAAAGTCCCCACCCTAA	AGCGGGGAAATCCAGCCGATGATGCGGCGCGGCGGCTCATGGCTCCCA
CCTCAATGAAAGTCCCTGCCCGAA	GACGGGGAAATCCGTACCGCGTGCATCAGGGTTATCAGAATCCCAGGTG
CCTCAATGAAAGTCCCCGCCCGAA	GGCGGGGAAATCCGCCGACACCGAGGTAGACTCCCCGGCACTTGGCTAG
CCTCAATGAAAGTCCCCACCCGAA	AGCGGGGAAATCGCTGACCTGACTCAGCTACTGAACACGTTCAAGACA
CCTCAATGAAAGTCCCCGCCCGAA	GGCAGGGAAATTAAGAAGAGGGTTTCGCCCGAGTCCACGCGCTGCATG
CCTCAATGAAAGTCCCCGCCTGAA	AGCAGGGAAATGGGCCTGCGTGAAGCCAGGACGTGACAAATTGCTTG
CCTCAATGAAAGTCCCCCGCCCGA

>NC_013715|6|1|1376010-1376758|CRT
TCTCAATGAAAGTCCCCACCCGAAGGC	AGGGAAATCGGGGTAAGCCCAAGGTGCATAGGCTTAAAGTTTTTG
CCTCAATGAAAGTCCCCGCCCGAAGGC	GGGGAAATGTCAGCGGCACGCTCGGCGGTGGTTTCTTCCGGTTCCG
CCTCAATGAAAGTCCCCGCCCGAAGGC	GGGGAAATGCGGGTCGACGGCGGCGATTTCACGGGCGGACTTATTG
CCTCAATGAAAGTCCCCGCCCGAAGGC	AGGGAAATGCTGTATTCAAGGATTCGGCGGATAAGATGCACGCG
CCTCAATGAAAGTCCCCACCCTAAAGC	GGGGAAATCCAGCCGATGATGCGGCGCGGCGGCTCATGGCTCCCA
CCTCAATGAAAGTCCCTGCCCGAAGAC	GGGGAAATCCGTACCGCGTGCATCAGGGTTATCAGAATCCCAGGTG
CCTCAATGAAAGTCCCCGCCCGAAGGC	GGGGAAATCCGCCGACACCGAGGTAGACTCCCCGGCACTTGGCTAG
CCTCAATGAAAGTCCCCACCCGAAAGC	GGGGAAATCGCTGACCTGACTCAGCTACTGAACACGTTCAAGACA
CCTCAATGAAAGTCCCCGCCCGAAGGC	AGGGAAATTAAGAAGAGGGTTTCGCCCGAGTCCACGCGCTGCATG
CCTCAATGAAAGTCCCCGCCTGAAAGC	AGGGAAATGGGCCTGCGTGAAGCCAGGACGTGACAAATTGCTTG
CCTCAATGAAAGTCCCCCGCCCGAAGG

>NC_013715|6|1|1376011-1376695|PILER-CR
CTCAATGAAAGTCCCCACCCGAAGGCAGGGAAATCG	GGGTAAGCCCAAGGTGCATAGGCTTAAAGTTTTTGCC
TCAATGAAAGTCCCCGCCCGAAGGCGGGGAAATGTC	AGCGGCACGCTCGGCGGTGGTTTCTTCCGGTTCCGCCT
CAATGAAAGTCCCCGCCCGAAGGCGGGGAAATGCGG	GTCGACGGCGGCGATTTCACGGGCGGACTTATTGCCTC
AATGAAAGTCCCCGCCCGAAGGCAGGGAAATGCTGT	ATTCAAGGATTCGGCGGATAAGATGCACGCGCCTCA
ATGAAAGTCCCCACCCTAAAGCGGGGAAATCCAGCC	GATGATGCGGCGCGGCGGCTCATGGCTCCCACCTCAA
TGAAAGTCCCTGCCCGAAGACGGGGAAATCCGTACC	GCGTGCATCAGGGTTATCAGAATCCCAGGTGCCTCAAT
GAAAGTCCCCGCCCGAAGGCGGGGAAATCCGCCGAC	ACCGAGGTAGACTCCCCGGCACTTGGCTAGCCTCAATG
AAAGTCCCCACCCGAAAGCGGGGAAATCGCTGACCT	GACTCAGCTACTGAACACGTTCAAGACACCTCAATGA
AAGTCCCCGCCCGAAGGCAGGGAAATTAAGAAGAGG	GTTTCGCCCGAGTCCACGCGCTGCATGCCTCAATGAA
AGTCCCCGCCTGAAAGCAGGGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_044150536.1\|1384526_1385255_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235082
NC_013715.1\|WP_044150539.1\|1386627_1387344_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371678
NC_013715.1\|WP_012903696.1\|1371863_1373453_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NC_013715.1\|WP_044150542.1\|1388776_1388959_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012903704.1\|1387673_1388684_+\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NC_013715.1\|WP_052265077.1\|1376984_1377287_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_013715.1\|WP_044150533.1\|1377283_1378894_-\|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_013715.1\|WP_044150534.1\|1382773_1383829_-\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|224402
NC_013715.1\|WP_044150545.1\|1389096_1389597_+\|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl\|CDD\|237976
NC_013715.1\|WP_012903691.1\|1359291_1361484_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|271320
NC_013715.1\|WP_012903693.1\|1365486_1366566_-\|S-layer-homology-domain-containing-protein	unknown	unknown	unknown
NC_013715.1\|WP_012903689.1\|1356882_1357587_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_044150531.1\|1373454_1374741_-\|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl\|CDD\|378223
NC_013715.1\|WP_012903703.1\|1385256_1386441_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012903695.1\|1369033_1371871_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NC_013715.1\|WP_012903690.1\|1357760_1358627_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_044150547.1\|1389671_1390118_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|376583
NC_013715.1\|WP_044150529.1\|1367058_1367814_+\|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl\|CDD\|377432
NC_013715.1\|WP_012903694.1\|1367969_1369034_-\|aldehyde-dehydrogenase	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
NC_013715.1\|WP_012903692.1\|1362056_1365116_-\|peptidase	unknown	unknown	gnl\|CDD\|271320

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_012903696.1\|1371863_1373453_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.89736e-72
NC_013715.1\|WP_012903704.1\|1387673_1388684_+\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	1.23896e-93
NC_013715.1\|WP_052265077.1\|1376984_1377287_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.05371e-19
NC_013715.1\|WP_044150533.1\|1377283_1378894_-\|CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.7994e-105
NC_013715.1\|WP_044150536.1\|1384526_1385255_+\|hypothetical-protein	gnl\|CDD\|235082	PRK02888, PRK02888, nitrous-oxide reductase; Validated.	0.000698444
NC_013715.1\|WP_044150545.1\|1389096_1389597_+\|Cys-tRNA(Pro)-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	2.04731e-69
NC_013715.1\|WP_012903691.1\|1359291_1361484_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	3.99744e-15
NC_013715.1\|WP_012903694.1\|1367969_1369034_-\|aldehyde-dehydrogenase	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	1.88422e-170
NC_013715.1\|WP_044150531.1\|1373454_1374741_-\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.2373e-26
NC_013715.1\|WP_012903695.1\|1369033_1371871_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	6.29023e-87
NC_013715.1\|WP_044150539.1\|1386627_1387344_+\|hypothetical-protein	gnl\|CDD\|371678	pfam11702, DUF3295, Protein of unknown function (DUF3295). This family is conserved in fungi but the function is not known.	0.0083202
NC_013715.1\|WP_044150547.1\|1389671_1390118_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	1.17533e-76
NC_013715.1\|WP_044150529.1\|1367058_1367814_+\|nicotinamide-mononucleotide-transporter	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	1.87766e-09
NC_013715.1\|WP_044150534.1\|1382773_1383829_-\|cell-division-protein-ZapE	gnl\|CDD\|224402	COG1485, COG1485, Predicted ATPase [General function prediction only].	2.39553e-64
NC_013715.1\|WP_012903692.1\|1362056_1365116_-\|peptidase	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	2.94171e-14

>NC_013715.1|WP_044150531.1|1373454_1374741_-|type-I-U-CRISPR-associated-protein-Cas7
MSQNESQTIIALADLIENVKLGGGSVITSITEQEPAAGPHAPLAPAKFVDGKGSDSKSVFAYEIRYIVEKPEDQDEPEKAVKGKPQKVVLIDSKQSELNRAEAAIEQGRQYGDEAVVKIPRAVVTYQTENGPVEYTDMELSHRIFDGHFRAGHIDGKPITENDQYRALRNCTPADMSALLNTAPAALLFGAWDSTRKSNQVRLRSALVGEIIGVLADQEPGAEHRQARRGGARVDAVAASVKLDAKELNSLVDDQEAELSAKNVAARRKEVKTAKADARISASTLGLGSIPPTLEETGAVACRRIIRSWVLSLATLRQLRFGTDETKNIAARALLAALGLNAIARAERELYIRANCDLIESSAPVVTLDQRFGKKKTFAPLTVEHTDQLLLEAIENAKKAGVADWNGQTFNVDGNPIIIKNATAEDAE
>NC_013715.1|WP_012903696.1|1371863_1373453_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MTNLGILARFPLGVYQGHKADGSPDAFPDPARLQAALLSAAAQGPHAIIENGQLAPSEESLKALKWLEENPPTGLQIPDMCPVYRSRNKMSRFMYREVAYSEKDGRQTERRAVSDGWAVSDTIGWQYDKVPADIAETITQLCGEVPSLGEASSFTALYTGEVEPTHTIDTKSGPFEAGGMPVRVPVPGRTDALMRAHAEAYPAKVPTKAGDKTAMSDTMRPSPVPTAGLGSIKYQPVEAETSTSPWEYLWLLEVDGEELKPEQYVKTSSLLHKALVAAAGFGAPSLITGRYPKGHKPANSLALQYLPARYLPDYLRREVKSKGVLLVLVPANAPTDEAVELGIALRSVETLYAQDFPRLTVKLRQKRLPAQGFWDAPKTGYKRLWRTLSAAVPESRVFNRPKKTETKAWTFADAALLSIAYVWRGSFEVPEAETSRERIRSLRNQVEEKAEAKVLEAHRVTQNPAAYAYKLPRTLPAEPWRGVVDLGNLATDTTLVAIGQSRHMGGGLLVPFDVPTEEYDRRKKEEKHD
>NC_013715.1|WP_012903695.1|1369033_1371871_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTSPATKLPSITRDEFGEFFAALDAALDAARNNAPNEAPKEKQKRYPFSWQEEVLDHICEHGVWPERINAPTGSGKSSVVDIHLFANALAAVGAAPRVPRRLCVTVGRRALVDSQATRADKILGCLEDALADGSGEPDILRRVAEALQSFQTRNDEKGSKPFETGHIRGELSNRNLPVTDISACAIIAATPDMYGSRALFRGYGSTKAARPRETALLAMDTVMVLDEAHMNRQLLHTTQRIAELQKREANLGVPTLQVIETTATPSTEDSDSTTLGVDIEALDSPNDEELRKRVHSHKELVLRPIDKWDGKPGNAATVNAAVDAIKDFLAHREAGEGSDEAHTVGCIVNHVRTAISIKEKLTKDKVLGKDEVELLVGRMRPYDLQKLHPDLFTTEGDESVKVVVATQTLEVGIDVDFADLVTELAPASSLAQRFGRVNRLGRRTDSKVVVIRPTNGDSVKKDAPPYKAVDLSNAYGWLEALNDAENPSVNPAAMVKNPPVQSSPERLLYQRPEWSDLLEFSRTDENPYDEPDLDLWLHDSLDAETAMGGVIVRDNLPSNTSAAMEILKTSYFAPSDEETFPANLKILHEILDYQDEHGVKPRKFLYRQGEISLWQDADHEEESRQSLAPGDVLLLDTGSVPFTNQGIAVTQRELPSKKDELEAVPFPKGIKLYVYEKCADREKDFREYLGLSPEEVAELLDSQSSGSETRIASELSIEAEDGQEVISWYAVVTDEESVEDSDIAQELAPTDPVLLDDHQNDVAERTRQLAENLGLAPEFSEALELAAKYHDEGKRDLRFQQMLGADLQADALAKSGHRSVAEAYRARSRSALPRGWRHEQLSALMVAASPEKVGEHRDLVLRIIGCSHGHGRFSFAHDAGFLLKEGYLPEGTDYEALKEQATRLFNVGYWDTLMEQTSRTYGPYATAYLEAVERAADAQISREGH
>NC_013715.1|WP_012903694.1|1367969_1369034_-|aldehyde-dehydrogenase
MATLTIAGDYTSALTHFALYGLSLMVEQKHPGTVTVGWSQEGQPRAQMHAEGVSEEEIAECVHSYVSSLAAEDSWVNVDQSYGAGKEAAVFSPFSPRIRGIDAEKYPDDWASHQKTRQAHLDALMERDDLLSLLWISGLGEPAYWRFEAKAPRPDHGASRWEMKTRNKGQEFVKDRLRLMCADLATWEPSAMLSGITGQTLHDSLDKKPDSRTGTGFTVPQPTDTALAFCALVGIANFPVIHQIHRIGVTPGAYPYNALHPRLMVLPVSSGRVTPARLRTVLRSHPYRRVVDEVGKAMERGSLSPDIFVSELADEKAILREKGVQAFVAFPIAKVGSDSAPERQVLKGSAIPLG
>NC_013715.1|WP_044150529.1|1367058_1367814_+|nicotinamide-mononucleotide-transporter
MEAKEFSYEKALLFFAKSKYADLFGVALVIAIAVASGYLSTTLDKYVDWGPITKFIPLGVISVINVGISMMSTRLTGRLSNIGNVLGIINTALSCAIDYIMGNKAAIITYPVTFIVYTFAIRRWQNSERGKALEPPTGTKGLLIISGIVAGSFAFSLAANYIGYRGQMTFLFWITTVVFGLSLSANILNALKLTMQWQFWFLYNAVQCVKSLTQGNFANVGKYIFYIINSVAALLLWTRSGTAAKGAVAVA
>NC_013715.1|WP_012903693.1|1365486_1366566_-|S-layer-homology-domain-containing-protein
MPLLTHRLSRRFFVKGASAAAAAGALTLQAQAAQADEAPTNIAPATEETKGPRLVIQRATITETGMTVNYTAHGLREFLTEGTTLTVRHGYVRNDSFETLRSWPLTPEFDGDADSFSGSDQFPIELMQGEGFDHALQLDICSDPWGQEITHQIAARIPVAETKILKTSFEDVPDNHPFAEDIRMANQKKWLMPNPQTGAFEPDRPVTREELIALLNHAAGHAGVSENSEVAPFADAAGRPTANALHWARDRKITEPLTGGDKIDPTAPVSHEELAAVLFQYNAEVQLTEMNEAAGSRFRDVLGAGTLHRYVAWAGANDIVLDSSGVFNPTAPTTRAELARFIRRYKLQNLLFTDFSYVS
>NC_013715.1|WP_012903692.1|1362056_1365116_-|peptidase
MNLASSKAFKGLAVGSLALAISGVATIPASFAAESTPVASQSTDARTITDKAMAKITQGLPGQFQVAYSKKTNKIWVAGTADRDKHVSTIARIDANSLKIEAVAELPIVKNDKGYQYDAAYGITVDDVDGTVWVTNTTDNSVSVYDQATMQQVWTTAGIAETDPNWIEHPRSVLVDHESGKAFVTGRFFVSAIDLKTKQVEKIQLEGAPDGGTRYISMNILVDGGKLYVPERTGGKIFVIDTKTFKVESSFDTKGNAEGEVRPSDIAIDHSQNEIYVSSQGVKGANSGVSIYDATTHEFKKFIPVGTQALSLDNDEANDLVYVSDFGTGKVGVIDGGAADKLIAEVAMNGGKANDLVVLPNGSVVAVDKQAGATATVPYVLDGTTGTVNTSNKVTSKPSKDKQGNDVPAKTTDIQANSILKFKVTATAGDNSEVKQVTPETREFQGYPATATKTKAADSTAPSTEAHRTVDANGSVANIIQGLPGQFQVGYSKKNHKLFVPTVGARGNLASSLARVDADTLQTEAFAELPVKKNDKGQYGYTSAYGVTVDDVDGTVWVTNTTDNSVAVYDQQTLKLIWSNEGVKEGDPNWIEHPRSVLVDHESGKAFVTGRFFVSAIDLKTKQVEKIQLEGAPDGGTRYISMNLFLDGGKLYVPERTGGKLFVVDTKTFKVEKTIQTQGEDSTVEVRPSDVAVDRSLGEIYVSSQGVKGVNSGISVYDLRTGDFKKFVKFGTQALALEHDEDSDLVYVTDFGTGKVAVFDGRADEVIGEVEMNGAAANDVTLLKDGSVLVLDKKDRDEKVTLPYVLNGTTGEITTASEYTTLPGKDRQGNDVPASVQQLKANSILKFKVGLKDTDASAAPVGITPTSLQFAGYPTVTGVKAEDSKPADPKPADPKPADPKPADPKVEDKKAEDKKSEDVKSEDKKSDAKTGAQDSKSAPDAVKADKSGSAVKNGGSSAGGSDNLGGGSSVAKSDAGSSQAGSSRGALANTGANAVMPLVAFASVALIAGAALVVRRRKA
>NC_013715.1|WP_012903691.1|1359291_1361484_-|LPXTG-cell-wall-anchor-domain-containing-protein
MNLTPSSGKALKGLAVGSLALAISGAAMIPASFAAPNTANQTATPSASAPSTASLSRVVDTSASVAQITQGLPGQYQVAYSKATNKIWMVGVGARGDLASTIARVNADTLQIEEVAALPFELDKNGEFGYISAYGITVDDVSGTVWVTNTTDNSLSVFDQNTMEQIWTNHGIAESDPNWIEHPRSVLVDHNSGKVFVTGRYYVSAIDMKTFEVTKLQLEGAPNGGTRYVGMNMTVDGDKLYVPERTGGKVFVINTKTFKTEQVIQTRGENSSVEVRPSDVTIDHSENEIYVSSQGVDGVNSGISVYDLTTGAFKKFVKFGTQALSMENDEARDLVYVTDFGTGKIAIFDAKTDRVIGEVEMNGGKANDLTITEDGSVIAVDKQDIANTTAAVPYVLNAKTGDGSLTDTYTSKATVDRNGKTVPSSQQKLVPNSIVKFYAEVSEGEFTSTATINPAKVPFQGYPKQATAVLIDPTLNFAEGTVDITRPYTFHVSGYDYDKPPAEGLRLFLVKEGEWSMGYDKLTDSELANIQKVSTIVPASAFVYNSRTGKYSFDATLRVPANTMQYSQGYLLGTVTAGSDVATNRNYDSAVSLIVNDAKDAGNADNRDEADEPAFPTNASASPSASAAVAEKPAADQPKGEQPKAEEASDQLGTTAKTAPLKNSSSVKSDSQPKGSNSDAQVSASATKSVPQSKGSLAKTGAQNVLSLAAVGAFALIAGAAVMVLRRRKA
>NC_013715.1|WP_012903690.1|1357760_1358627_+|hypothetical-protein
MSTMYTRRTALTALGLGTAALLAACSSKSSESSATASASAPESSAASATASVSPTAEATTTVEPGPSMKGEVVLADYSSTGTFEPGTKEHKAVNVAIPVEPAKLRDNSVEGLHAFIAYWQATLNYLLLTGDGTRFTNIDHTGDYSTVAEFFQSMYASESGWVIGSERPMVLSLTADRPTKDTRTGYYTWATEMVIDGAEGAGVYSKTNDRVQPLTEVFKYPGKPVAGQIVAHYQDGTWRMVRRAPGTASASPVPSLSPSASAESTASAEATAAGSTEATTASAEASAQ
>NC_013715.1|WP_012903689.1|1356882_1357587_+|hypothetical-protein
MSTFVTRRAALGIATTTALASLTACASDIRPLSNQSTPGEQRSYKGELKFNGYESRGTYVPATSSKKAENPPKPVPPAEMKAKTTEGMYAAINYWLASFNYLMITGDIEPFKAVDINRNDIYKAEPFVEFYEKNTGWVYGTDAPFSAELTEDAPQKVDEQQYRWLGVGRYNKEAKIHYTDGRELTMASLSSGPGDYEFFFILEYQDGAWTVRNEPAKLTTSSPSSSASSSGTSI
>NC_013715.1|WP_052265077.1|1376984_1377287_-|CRISPR-associated-endonuclease-Cas2
MMRDDARRTLIAYDVPSDRRRTKLAKLILSYGDRIQYSVFIVDAAPAKVRRIKDEVQELIDPDEDSVLFCDLGLLARLDEPTFSYIGRAREVTESDALIL
>NC_013715.1|WP_044150533.1|1377283_1378894_-|CRISPR-associated-endonuclease-Cas4/Cas1
MSTPYSAGDELPISLVMHTVYCPRRAWIESNGEKTDTSQMQEGQSAHKRVDDPKTSRGTQQRAVTISSTRLGLTGRCDAVEPQEDGSTRIIEYKATPVRRNASVTPAHRVQLALQKICLEEAGETVSECAVHFTNHNKTVPVDISDEDIRTAEEYVHTTRALIDNPTAPQPLEDSPRCSWCSHISVCLPDESRGKENITRVVASNPDSQVAHLTTQGSRATVQQGRLIVQHLGETISSVPLERVHSLVVHGNIDVSSALLRELMWRNCTIIWCSSTGRVYGWSQPGTGPNGLARVQQHVLSAQGYLPIASAMIASKIANQATLLRRNGHAADVCRTMRDIQKNTPQATSIPELLGLEGEAASLYFGNFATMLKEDALTELGWIWTGRQGRGANDPINILLNYAYGMLSSECIRGILTCGLDPHAGFLHSSSRNKPALALDLMEEFRAVIADSVVVSLINRKQVKAAHFTTVGGSYRLTPEGRKTIIAAFEKRMVTEITHPTYGYSVTWRRAIEVQARMLLGVINGTTREYTGVTVR
>NC_013715.1|WP_044150534.1|1382773_1383829_-|cell-division-protein-ZapE
MPTTTVHLTDRIPRVSADELLAGFRPSERFGEVSFDSYIPDPNQPSQAEAVQKLKDFGDKINGGGAGAGFFGRLFGGKKKDSTKAGLYLDGGFGVGKTHLLASLWHYVEGPKAFGTFVEYTNLVGALTFRKTVEALSSYKLVCIDEFELDDPGDTVLMSRLMRELADAGVKLVATSNTLPGALGEGRFAAEDFKREIQVLASQFEVHRVDGEDFRHRGLPAAPEPVADDAFDAKIEEVFGGQTVGVDNFADLVEHLAKVHPSRYRQLIDGLDGIAWRDVHPITEQSVALRFVVLADRLYDKDLPIVSSGVPFDKVFTEEMLAGGYQKKYFRAVSRLTALAREGMLGEEAER
>NC_013715.1|WP_044150536.1|1384526_1385255_+|hypothetical-protein
MDSTIFNRRTLLGSGALVGLGALLAACGQQANNEAAATASAAPSETASASAAASESASASATPSTIRGYSGQSKAPDGEYRKADGYGPAQNVPKPPSRKQYPETQEGALNMINDWTIAHNYAVQTGDCEYAKAYVKPETDEEKFYGYVERLYKRGGWIINGLDKYQLDGQFIYDEKTKEYTLMLKHIWEFVMYVEPDGSYTEDTNTAEGDDSGAYILKYSDGFWTVVGSLSQEQLKEKGSLK
>NC_013715.1|WP_012903703.1|1385256_1386441_+|hypothetical-protein
MFHIREIGSAYILTFAVITSSVFMSVPPANSQECSSDNGHAICLTKEKTPQQNFARKGTLDTRIDSPTAKSSLEIEAENQRKEEEFRRNYDEVKDNLGQPMYIPKGNARKQGEAECLAAGRQPGKYSRIREMPISGEEVNYDPKTGLGTYCQPLDTKTLTSNDPAQPKGPTIEEMLQEVEDQFAKTDIQAPVLKQSYNLGSGQGEDNPNVYKNQAVNFYVDAPTARWEGDLMIGHVEMESYPTQMTIQYGNGDEGSFYTMGKPVSRARGEESRKTATSYVYKRSGNFHAYATVSYSGRFRVNGGDWHALDVVLTKETVDPLLIRVWWTDVGRVAGDCSYDDTRWGCKNDPTMGKKDNPNPRLRKADIRTGQRWHLNDNGDGDTEYSLHRDWPDM
>NC_013715.1|WP_044150539.1|1386627_1387344_+|hypothetical-protein
MTSVILTRRAMLSGSAFVGLGALLAACGQQANNEAAATTSAAPSETVSASAAASDAASASATPSPVITRGYSGGSKAPDGEYRSADKYGPAQNVPKPTAPEDGYNEKSLEGLRKTFDAWVQWGNYGIQTGDYAKAREFISPNFSSELEAYESVEKLYRRGGWVIDGIEKFTADGSPWSEDGETYFWKMYRNWNQEIHVEPDGKWTAWDNEDKTNDTLKVKMKHDGQKWSILDFEEFNV
>NC_013715.1|WP_012903704.1|1387673_1388684_+|YeiH-family-putative-sulfate-export-transporter
MSFLSKNWAGLSVCLIISIISWVLGGFLPVVGAPVFAIFIGMILHPFLTSYTQLDAGLTYSSKKLLQYAVILLGFGLSISQVFAVGTSSLPVIISTISIALIIAFFFQRFFNLDTKLATLIGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGSWLHLSNEGFALFAGTAVNDTSSVTATASAWDSLYNANTLEPATIVKLTRTLAIIPIVLFLSYWQSRQQGDNQGVKLKKIFPVFILYFILASLLTTLLTSFGVSTSFFSPLKQLSIFLIIMAMSAIGLKTNLIAMIKSSGKSILLGALCWIAIILTSLGMQLLIGIY
>NC_013715.1|WP_044150542.1|1388776_1388959_+|hypothetical-protein
MLEHIWEFVMYVEPDGSYTEDKNTAEGDDNGAYILKYSDGFWTVVGSLSQEQLKEKGLLK
>NC_013715.1|WP_044150545.1|1389096_1389597_+|Cys-tRNA(Pro)-deacylase
MAKKTKGKKSGAATAAVALLTETNTPFQMREYEHVEGVTSFGEEAAKKLGASEEQVFKTLLIVHEKDFAVAIVPVSGKLNIKAAAAALGWKSASMCDPKVAERRTGYVVGGISPLGQKTPSPTLLDESAQLFDTIMVSGGKRGLDVELAPDDLLKLTNGKYADIRA
>NC_013715.1|WP_044150547.1|1389671_1390118_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MGNSLPGVGAIAKNWREVLKPEEYAVLREGGTERAFTGEYWNTHTEGVYSCRACGTELFRSDQKFDSHCGWPSFFAPLAEDRVRYLEDTTFGMRRVEVRCAACDSHLGHVFEGEGYPTPTDLRYCINSVCLTLTPAGEASADEAESAE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_7

1379239-1380291

Unclear

Consensus_repeat	Method
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CRISPRCasFinder
CCTCAATGAAAGNCCNTNCNAAAANGNAGGGAAAT	CRT
CCTCAATGAAAGCCCTTCC	PILER-CR

14 spacers

cas1,cas2,csb1gr7,csb2gr5,cas3,csb3

The CRISPR arrays of NC_013715_7

>merge|NC_013715|7|1379239-1380291|CRISPRCasFinder,CRT,PILER-CR
GCCTCGATGAAGGTCCCTACGAAAAAGTAGGGAAATCCGTCTCCGCCCTTGAAATCCTCAAACGCAAACCCACCTCAATGAAAGTCCCCACTAGAAAGCGAAGAAATCCGCAAGGGGGTTCTTTTCCTTCACACCGCCGACAGTGCCTCAATGAAAGTCCCTACGAAAAAGTAGGGAAATGTAGGTCGTATGCCACAGCACCGCCACGTCATCGAGCCCTCAATGAAAGCCCCTCCAAAAAGGAAGGGAAATTCGAAGCTATCGGAGCCGTCGTAGAAGACACAATCAAGCCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAGATTGTCGGGGATTTGGGGTGCCCCGTAGAGGGTGACGGCCCCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAATCGCCGCCTCCTGGACGAAGGCATGCCGGGCCAGTGCCGTCGCCTCAATGAAAGCCCTTCCGAAAAGGAAGAGAAATTGAGCTTCCACGCGACATACGAGGTGCACTCACCAAAGCCTCAATGAAAGCCCTTCCCAAAAGGAAGGGAAATTTTCTTGAAGTCTTGAGCCATGCCGCCGTGGACGTAGCCTCAATGAAAGCCCTTCCCATAAGGAAGGGAAATGCAACCATTGTAAACCGAAGGCCAAGCCGCTGATAGCCTCAATGAAAATCCCTACGAAAAAGCAGGGAAATAGGCGCTTAGCGGTTGTTGTTTCCTAGCGCGTCGTAACCTCAATGAAAGTCCTTACGAAATTGTAGGGAAGTGATGCGATGACCAAGACCTATGCCTTCGCGGGCTCGCCTCAATGAAAGCCCTCCCGAAAAGGTAGGGAAATGCGTCACCGACGATACCCCCGACGTGGCATACGCCCCGCCTCAATGAAAGCCCTTCCCAGGAGGAAGGGAAATTGTCGTAAGCGCCCGAAATGTAGAGGCAGAGGTGGGTGCCTCAATGAAAGTCCCTACGAATAGGTAGGGAATAGCCTGCGGCGATACATACCGTTGGCGCGGCCACGTTGTGCCTTAATGCAAGTCTCTCCTGATAGAGAGAGAACA

>NC_013715|7|7|1379239-1380218|CRISPRCasFinder
GCCTCGATGAAGGTCCCTACGAAAAAGTAGGGAAAT	CCGTCTCCGCCCTTGAAATCCTCAAACGCAAACCC
ACCTCAATGAAAGTCCCCACTAGAAAGCGAAGAAAT	CCGCAAGGGGGTTCTTTTCCTTCACACCGCCGACAGT
GCCTCAATGAAAGTCCCTACGAAAAAGTAGGGAAAT	GTAGGTCGTATGCCACAGCACCGCCACGTCATCGAG
CCCTCAATGAAAGCCCCTCCAAAAAGGAAGGGAAAT	TCGAAGCTATCGGAGCCGTCGTAGAAGACACAATCAA
GCCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAGAT	TGTCGGGGATTTGGGGTGCCCCGTAGAGGGTGACGGC
CCCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAAT	CGCCGCCTCCTGGACGAAGGCATGCCGGGCCAGTGCCGTC
GCCTCAATGAAAGCCCTTCCGAAAAGGAAGAGAAAT	TGAGCTTCCACGCGACATACGAGGTGCACTCACCAAA
GCCTCAATGAAAGCCCTTCCCAAAAGGAAGGGAAAT	TTTCTTGAAGTCTTGAGCCATGCCGCCGTGGACGTA
GCCTCAATGAAAGCCCTTCCCATAAGGAAGGGAAAT	GCAACCATTGTAAACCGAAGGCCAAGCCGCTGATA
GCCTCAATGAAAATCCCTACGAAAAAGCAGGGAAAT	AGGCGCTTAGCGGTTGTTGTTTCCTAGCGCGTCGTA
ACCTCAATGAAAGTCCTTACGAAATTGTAGGGAAGT	GATGCGATGACCAAGACCTATGCCTTCGCGGGCTC
GCCTCAATGAAAGCCCTCCCGAAAAGGTAGGGAAAT	GCGTCACCGACGATACCCCCGACGTGGCATACGCCCC
GCCTCAATGAAAGCCCTTCCCAGGAGGAAGGGAAAT	TGTCGTAAGCGCCCGAAATGTAGAGGCAGAGGTGGGT
GCCTCAATGAAAGTCCCTACGAATAGGTAGGGAATAG

>NC_013715|7|2|1379240-1380291|CRT
CCTCGATGAAGGTCCCTACGAAAAAGTAGGGAAAT	CCGTCTCCGCCCTTGAAATCCTCAAACGCAAACCCA
CCTCAATGAAAGTCCCCACTAGAAAGCGAAGAAAT	CCGCAAGGGGGTTCTTTTCCTTCACACCGCCGACAGTG
CCTCAATGAAAGTCCCTACGAAAAAGTAGGGAAAT	GTAGGTCGTATGCCACAGCACCGCCACGTCATCGAGC
CCTCAATGAAAGCCCCTCCAAAAAGGAAGGGAAAT	TCGAAGCTATCGGAGCCGTCGTAGAAGACACAATCAAG
CCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAGAT	TGTCGGGGATTTGGGGTGCCCCGTAGAGGGTGACGGCC
CCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAAT	CGCCGCCTCCTGGACGAAGGCATGCCGGGCCAGTGCCGTCG
CCTCAATGAAAGCCCTTCCGAAAAGGAAGAGAAAT	TGAGCTTCCACGCGACATACGAGGTGCACTCACCAAAG
CCTCAATGAAAGCCCTTCCCAAAAGGAAGGGAAAT	TTTCTTGAAGTCTTGAGCCATGCCGCCGTGGACGTAG
CCTCAATGAAAGCCCTTCCCATAAGGAAGGGAAAT	GCAACCATTGTAAACCGAAGGCCAAGCCGCTGATAG
CCTCAATGAAAATCCCTACGAAAAAGCAGGGAAAT	AGGCGCTTAGCGGTTGTTGTTTCCTAGCGCGTCGTAA
CCTCAATGAAAGTCCTTACGAAATTGTAGGGAAGT	GATGCGATGACCAAGACCTATGCCTTCGCGGGCTCG
CCTCAATGAAAGCCCTCCCGAAAAGGTAGGGAAAT	GCGTCACCGACGATACCCCCGACGTGGCATACGCCCCG
CCTCAATGAAAGCCCTTCCCAGGAGGAAGGGAAAT	TGTCGTAAGCGCCCGAAATGTAGAGGCAGAGGTGGGTG
CCTCAATGAAAGTCCCTACGAATAGGTAGGGAATA	GCCTGCGGCGATACATACCGTTGGCGCGGCCACGTTGTG
CCTTAATGCAAGTCTCTCCTGATAGAGAGAGAACA

>NC_013715|7|2|1379311-1379769|PILER-CR
CCTCAATGAAAGTCCCCAC	TAGAAAGCGAAGAAATCCGCAAGGGGGTTCTTTTCCTTCACACCGCCGACAGTGCCTC
AATGAAAGTCCCTACGAAA	AAGTAGGGAAATGTAGGTCGTATGCCACAGCACCGCCACGTCATCGAGCCCTCAATG
AAAGCCCCTCCAAAAAGGA	AGGGAAATTCGAAGCTATCGGAGCCGTCGTAGAAGACACAATCAAGCCTCAATG
AAAGCCCTTCCGAAAAGGA	AGGGAGATTGTCGGGGATTTGGGGTGCCCCGTAGAGGGTGACGGCCCCTCAATG
AAAGCCCCTCCGAAAAGGA	AGGGAAATCGCCGCCTCCTGGACGAAGGCATGCCGGGCCAGTGCCGTCGCCTCAATG
AAAGCCCTTCCGAAAAGGA	AGAGAAATTGAGCTTCCACGCGACATACGAGGTGCACTCACCAAAGCCTCAATG
AAAGCCCTTCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_044150539.1\|1386627_1387344_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371678
NC_013715.1\|WP_012903696.1\|1371863_1373453_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NC_013715.1\|WP_044150542.1\|1388776_1388959_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012903704.1\|1387673_1388684_+\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NC_013715.1\|WP_044150531.1\|1373454_1374741_-\|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl\|CDD\|378223
NC_013715.1\|WP_044150533.1\|1377283_1378894_-\|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_013715.1\|WP_044150534.1\|1382773_1383829_-\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|224402
NC_013715.1\|WP_044150545.1\|1389096_1389597_+\|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl\|CDD\|237976
NC_013715.1\|WP_012903691.1\|1359291_1361484_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|271320
NC_013715.1\|WP_044150550.1\|1390332_1391598_+\|ribonuclease-D	unknown	unknown	gnl\|CDD\|223426
NC_013715.1\|WP_012903693.1\|1365486_1366566_-\|S-layer-homology-domain-containing-protein	unknown	unknown	unknown
NC_013715.1\|WP_052265077.1\|1376984_1377287_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_013715.1\|WP_012903703.1\|1385256_1386441_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_044150551.1\|1391800_1392331_+\|Rieske-(2Fe-2S)-protein	unknown	unknown	gnl\|CDD\|239550
NC_013715.1\|WP_012903695.1\|1369033_1371871_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NC_013715.1\|WP_044150536.1\|1384526_1385255_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235082
NC_013715.1\|WP_044150547.1\|1389671_1390118_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|376583
NC_013715.1\|WP_044150529.1\|1367058_1367814_+\|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl\|CDD\|377432
NC_013715.1\|WP_012903694.1\|1367969_1369034_-\|aldehyde-dehydrogenase	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
NC_013715.1\|WP_012903692.1\|1362056_1365116_-\|peptidase	unknown	unknown	gnl\|CDD\|271320

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_012903696.1\|1371863_1373453_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.89736e-72
NC_013715.1\|WP_012903704.1\|1387673_1388684_+\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	1.23896e-93
NC_013715.1\|WP_044150531.1\|1373454_1374741_-\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.2373e-26
NC_013715.1\|WP_044150533.1\|1377283_1378894_-\|CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.7994e-105
NC_013715.1\|WP_044150536.1\|1384526_1385255_+\|hypothetical-protein	gnl\|CDD\|235082	PRK02888, PRK02888, nitrous-oxide reductase; Validated.	0.000698444
NC_013715.1\|WP_044150545.1\|1389096_1389597_+\|Cys-tRNA(Pro)-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	2.04731e-69
NC_013715.1\|WP_012903691.1\|1359291_1361484_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	3.99744e-15
NC_013715.1\|WP_012903694.1\|1367969_1369034_-\|aldehyde-dehydrogenase	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	1.88422e-170
NC_013715.1\|WP_052265077.1\|1376984_1377287_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.05371e-19
NC_013715.1\|WP_044150550.1\|1390332_1391598_+\|ribonuclease-D	gnl\|CDD\|223426	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis].	3.6169e-67
NC_013715.1\|WP_044150551.1\|1391800_1392331_+\|Rieske-(2Fe-2S)-protein	gnl\|CDD\|239550	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.	2.78698e-24
NC_013715.1\|WP_012903695.1\|1369033_1371871_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	6.29023e-87
NC_013715.1\|WP_044150539.1\|1386627_1387344_+\|hypothetical-protein	gnl\|CDD\|371678	pfam11702, DUF3295, Protein of unknown function (DUF3295). This family is conserved in fungi but the function is not known.	0.0083202
NC_013715.1\|WP_044150547.1\|1389671_1390118_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	1.17533e-76
NC_013715.1\|WP_044150529.1\|1367058_1367814_+\|nicotinamide-mononucleotide-transporter	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	1.87766e-09
NC_013715.1\|WP_044150534.1\|1382773_1383829_-\|cell-division-protein-ZapE	gnl\|CDD\|224402	COG1485, COG1485, Predicted ATPase [General function prediction only].	2.39553e-64
NC_013715.1\|WP_012903692.1\|1362056_1365116_-\|peptidase	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	2.94171e-14

>NC_013715.1|WP_044150533.1|1377283_1378894_-|CRISPR-associated-endonuclease-Cas4/Cas1
MSTPYSAGDELPISLVMHTVYCPRRAWIESNGEKTDTSQMQEGQSAHKRVDDPKTSRGTQQRAVTISSTRLGLTGRCDAVEPQEDGSTRIIEYKATPVRRNASVTPAHRVQLALQKICLEEAGETVSECAVHFTNHNKTVPVDISDEDIRTAEEYVHTTRALIDNPTAPQPLEDSPRCSWCSHISVCLPDESRGKENITRVVASNPDSQVAHLTTQGSRATVQQGRLIVQHLGETISSVPLERVHSLVVHGNIDVSSALLRELMWRNCTIIWCSSTGRVYGWSQPGTGPNGLARVQQHVLSAQGYLPIASAMIASKIANQATLLRRNGHAADVCRTMRDIQKNTPQATSIPELLGLEGEAASLYFGNFATMLKEDALTELGWIWTGRQGRGANDPINILLNYAYGMLSSECIRGILTCGLDPHAGFLHSSSRNKPALALDLMEEFRAVIADSVVVSLINRKQVKAAHFTTVGGSYRLTPEGRKTIIAAFEKRMVTEITHPTYGYSVTWRRAIEVQARMLLGVINGTTREYTGVTVR
>NC_013715.1|WP_052265077.1|1376984_1377287_-|CRISPR-associated-endonuclease-Cas2
MMRDDARRTLIAYDVPSDRRRTKLAKLILSYGDRIQYSVFIVDAAPAKVRRIKDEVQELIDPDEDSVLFCDLGLLARLDEPTFSYIGRAREVTESDALIL
>NC_013715.1|WP_044150531.1|1373454_1374741_-|type-I-U-CRISPR-associated-protein-Cas7
MSQNESQTIIALADLIENVKLGGGSVITSITEQEPAAGPHAPLAPAKFVDGKGSDSKSVFAYEIRYIVEKPEDQDEPEKAVKGKPQKVVLIDSKQSELNRAEAAIEQGRQYGDEAVVKIPRAVVTYQTENGPVEYTDMELSHRIFDGHFRAGHIDGKPITENDQYRALRNCTPADMSALLNTAPAALLFGAWDSTRKSNQVRLRSALVGEIIGVLADQEPGAEHRQARRGGARVDAVAASVKLDAKELNSLVDDQEAELSAKNVAARRKEVKTAKADARISASTLGLGSIPPTLEETGAVACRRIIRSWVLSLATLRQLRFGTDETKNIAARALLAALGLNAIARAERELYIRANCDLIESSAPVVTLDQRFGKKKTFAPLTVEHTDQLLLEAIENAKKAGVADWNGQTFNVDGNPIIIKNATAEDAE
>NC_013715.1|WP_012903696.1|1371863_1373453_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MTNLGILARFPLGVYQGHKADGSPDAFPDPARLQAALLSAAAQGPHAIIENGQLAPSEESLKALKWLEENPPTGLQIPDMCPVYRSRNKMSRFMYREVAYSEKDGRQTERRAVSDGWAVSDTIGWQYDKVPADIAETITQLCGEVPSLGEASSFTALYTGEVEPTHTIDTKSGPFEAGGMPVRVPVPGRTDALMRAHAEAYPAKVPTKAGDKTAMSDTMRPSPVPTAGLGSIKYQPVEAETSTSPWEYLWLLEVDGEELKPEQYVKTSSLLHKALVAAAGFGAPSLITGRYPKGHKPANSLALQYLPARYLPDYLRREVKSKGVLLVLVPANAPTDEAVELGIALRSVETLYAQDFPRLTVKLRQKRLPAQGFWDAPKTGYKRLWRTLSAAVPESRVFNRPKKTETKAWTFADAALLSIAYVWRGSFEVPEAETSRERIRSLRNQVEEKAEAKVLEAHRVTQNPAAYAYKLPRTLPAEPWRGVVDLGNLATDTTLVAIGQSRHMGGGLLVPFDVPTEEYDRRKKEEKHD
>NC_013715.1|WP_012903695.1|1369033_1371871_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTSPATKLPSITRDEFGEFFAALDAALDAARNNAPNEAPKEKQKRYPFSWQEEVLDHICEHGVWPERINAPTGSGKSSVVDIHLFANALAAVGAAPRVPRRLCVTVGRRALVDSQATRADKILGCLEDALADGSGEPDILRRVAEALQSFQTRNDEKGSKPFETGHIRGELSNRNLPVTDISACAIIAATPDMYGSRALFRGYGSTKAARPRETALLAMDTVMVLDEAHMNRQLLHTTQRIAELQKREANLGVPTLQVIETTATPSTEDSDSTTLGVDIEALDSPNDEELRKRVHSHKELVLRPIDKWDGKPGNAATVNAAVDAIKDFLAHREAGEGSDEAHTVGCIVNHVRTAISIKEKLTKDKVLGKDEVELLVGRMRPYDLQKLHPDLFTTEGDESVKVVVATQTLEVGIDVDFADLVTELAPASSLAQRFGRVNRLGRRTDSKVVVIRPTNGDSVKKDAPPYKAVDLSNAYGWLEALNDAENPSVNPAAMVKNPPVQSSPERLLYQRPEWSDLLEFSRTDENPYDEPDLDLWLHDSLDAETAMGGVIVRDNLPSNTSAAMEILKTSYFAPSDEETFPANLKILHEILDYQDEHGVKPRKFLYRQGEISLWQDADHEEESRQSLAPGDVLLLDTGSVPFTNQGIAVTQRELPSKKDELEAVPFPKGIKLYVYEKCADREKDFREYLGLSPEEVAELLDSQSSGSETRIASELSIEAEDGQEVISWYAVVTDEESVEDSDIAQELAPTDPVLLDDHQNDVAERTRQLAENLGLAPEFSEALELAAKYHDEGKRDLRFQQMLGADLQADALAKSGHRSVAEAYRARSRSALPRGWRHEQLSALMVAASPEKVGEHRDLVLRIIGCSHGHGRFSFAHDAGFLLKEGYLPEGTDYEALKEQATRLFNVGYWDTLMEQTSRTYGPYATAYLEAVERAADAQISREGH
>NC_013715.1|WP_012903694.1|1367969_1369034_-|aldehyde-dehydrogenase
MATLTIAGDYTSALTHFALYGLSLMVEQKHPGTVTVGWSQEGQPRAQMHAEGVSEEEIAECVHSYVSSLAAEDSWVNVDQSYGAGKEAAVFSPFSPRIRGIDAEKYPDDWASHQKTRQAHLDALMERDDLLSLLWISGLGEPAYWRFEAKAPRPDHGASRWEMKTRNKGQEFVKDRLRLMCADLATWEPSAMLSGITGQTLHDSLDKKPDSRTGTGFTVPQPTDTALAFCALVGIANFPVIHQIHRIGVTPGAYPYNALHPRLMVLPVSSGRVTPARLRTVLRSHPYRRVVDEVGKAMERGSLSPDIFVSELADEKAILREKGVQAFVAFPIAKVGSDSAPERQVLKGSAIPLG
>NC_013715.1|WP_044150529.1|1367058_1367814_+|nicotinamide-mononucleotide-transporter
MEAKEFSYEKALLFFAKSKYADLFGVALVIAIAVASGYLSTTLDKYVDWGPITKFIPLGVISVINVGISMMSTRLTGRLSNIGNVLGIINTALSCAIDYIMGNKAAIITYPVTFIVYTFAIRRWQNSERGKALEPPTGTKGLLIISGIVAGSFAFSLAANYIGYRGQMTFLFWITTVVFGLSLSANILNALKLTMQWQFWFLYNAVQCVKSLTQGNFANVGKYIFYIINSVAALLLWTRSGTAAKGAVAVA
>NC_013715.1|WP_012903693.1|1365486_1366566_-|S-layer-homology-domain-containing-protein
MPLLTHRLSRRFFVKGASAAAAAGALTLQAQAAQADEAPTNIAPATEETKGPRLVIQRATITETGMTVNYTAHGLREFLTEGTTLTVRHGYVRNDSFETLRSWPLTPEFDGDADSFSGSDQFPIELMQGEGFDHALQLDICSDPWGQEITHQIAARIPVAETKILKTSFEDVPDNHPFAEDIRMANQKKWLMPNPQTGAFEPDRPVTREELIALLNHAAGHAGVSENSEVAPFADAAGRPTANALHWARDRKITEPLTGGDKIDPTAPVSHEELAAVLFQYNAEVQLTEMNEAAGSRFRDVLGAGTLHRYVAWAGANDIVLDSSGVFNPTAPTTRAELARFIRRYKLQNLLFTDFSYVS
>NC_013715.1|WP_012903692.1|1362056_1365116_-|peptidase
MNLASSKAFKGLAVGSLALAISGVATIPASFAAESTPVASQSTDARTITDKAMAKITQGLPGQFQVAYSKKTNKIWVAGTADRDKHVSTIARIDANSLKIEAVAELPIVKNDKGYQYDAAYGITVDDVDGTVWVTNTTDNSVSVYDQATMQQVWTTAGIAETDPNWIEHPRSVLVDHESGKAFVTGRFFVSAIDLKTKQVEKIQLEGAPDGGTRYISMNILVDGGKLYVPERTGGKIFVIDTKTFKVESSFDTKGNAEGEVRPSDIAIDHSQNEIYVSSQGVKGANSGVSIYDATTHEFKKFIPVGTQALSLDNDEANDLVYVSDFGTGKVGVIDGGAADKLIAEVAMNGGKANDLVVLPNGSVVAVDKQAGATATVPYVLDGTTGTVNTSNKVTSKPSKDKQGNDVPAKTTDIQANSILKFKVTATAGDNSEVKQVTPETREFQGYPATATKTKAADSTAPSTEAHRTVDANGSVANIIQGLPGQFQVGYSKKNHKLFVPTVGARGNLASSLARVDADTLQTEAFAELPVKKNDKGQYGYTSAYGVTVDDVDGTVWVTNTTDNSVAVYDQQTLKLIWSNEGVKEGDPNWIEHPRSVLVDHESGKAFVTGRFFVSAIDLKTKQVEKIQLEGAPDGGTRYISMNLFLDGGKLYVPERTGGKLFVVDTKTFKVEKTIQTQGEDSTVEVRPSDVAVDRSLGEIYVSSQGVKGVNSGISVYDLRTGDFKKFVKFGTQALALEHDEDSDLVYVTDFGTGKVAVFDGRADEVIGEVEMNGAAANDVTLLKDGSVLVLDKKDRDEKVTLPYVLNGTTGEITTASEYTTLPGKDRQGNDVPASVQQLKANSILKFKVGLKDTDASAAPVGITPTSLQFAGYPTVTGVKAEDSKPADPKPADPKPADPKPADPKVEDKKAEDKKSEDVKSEDKKSDAKTGAQDSKSAPDAVKADKSGSAVKNGGSSAGGSDNLGGGSSVAKSDAGSSQAGSSRGALANTGANAVMPLVAFASVALIAGAALVVRRRKA
>NC_013715.1|WP_012903691.1|1359291_1361484_-|LPXTG-cell-wall-anchor-domain-containing-protein
MNLTPSSGKALKGLAVGSLALAISGAAMIPASFAAPNTANQTATPSASAPSTASLSRVVDTSASVAQITQGLPGQYQVAYSKATNKIWMVGVGARGDLASTIARVNADTLQIEEVAALPFELDKNGEFGYISAYGITVDDVSGTVWVTNTTDNSLSVFDQNTMEQIWTNHGIAESDPNWIEHPRSVLVDHNSGKVFVTGRYYVSAIDMKTFEVTKLQLEGAPNGGTRYVGMNMTVDGDKLYVPERTGGKVFVINTKTFKTEQVIQTRGENSSVEVRPSDVTIDHSENEIYVSSQGVDGVNSGISVYDLTTGAFKKFVKFGTQALSMENDEARDLVYVTDFGTGKIAIFDAKTDRVIGEVEMNGGKANDLTITEDGSVIAVDKQDIANTTAAVPYVLNAKTGDGSLTDTYTSKATVDRNGKTVPSSQQKLVPNSIVKFYAEVSEGEFTSTATINPAKVPFQGYPKQATAVLIDPTLNFAEGTVDITRPYTFHVSGYDYDKPPAEGLRLFLVKEGEWSMGYDKLTDSELANIQKVSTIVPASAFVYNSRTGKYSFDATLRVPANTMQYSQGYLLGTVTAGSDVATNRNYDSAVSLIVNDAKDAGNADNRDEADEPAFPTNASASPSASAAVAEKPAADQPKGEQPKAEEASDQLGTTAKTAPLKNSSSVKSDSQPKGSNSDAQVSASATKSVPQSKGSLAKTGAQNVLSLAAVGAFALIAGAAVMVLRRRKA
>NC_013715.1|WP_044150534.1|1382773_1383829_-|cell-division-protein-ZapE
MPTTTVHLTDRIPRVSADELLAGFRPSERFGEVSFDSYIPDPNQPSQAEAVQKLKDFGDKINGGGAGAGFFGRLFGGKKKDSTKAGLYLDGGFGVGKTHLLASLWHYVEGPKAFGTFVEYTNLVGALTFRKTVEALSSYKLVCIDEFELDDPGDTVLMSRLMRELADAGVKLVATSNTLPGALGEGRFAAEDFKREIQVLASQFEVHRVDGEDFRHRGLPAAPEPVADDAFDAKIEEVFGGQTVGVDNFADLVEHLAKVHPSRYRQLIDGLDGIAWRDVHPITEQSVALRFVVLADRLYDKDLPIVSSGVPFDKVFTEEMLAGGYQKKYFRAVSRLTALAREGMLGEEAER
>NC_013715.1|WP_044150536.1|1384526_1385255_+|hypothetical-protein
MDSTIFNRRTLLGSGALVGLGALLAACGQQANNEAAATASAAPSETASASAAASESASASATPSTIRGYSGQSKAPDGEYRKADGYGPAQNVPKPPSRKQYPETQEGALNMINDWTIAHNYAVQTGDCEYAKAYVKPETDEEKFYGYVERLYKRGGWIINGLDKYQLDGQFIYDEKTKEYTLMLKHIWEFVMYVEPDGSYTEDTNTAEGDDSGAYILKYSDGFWTVVGSLSQEQLKEKGSLK
>NC_013715.1|WP_012903703.1|1385256_1386441_+|hypothetical-protein
MFHIREIGSAYILTFAVITSSVFMSVPPANSQECSSDNGHAICLTKEKTPQQNFARKGTLDTRIDSPTAKSSLEIEAENQRKEEEFRRNYDEVKDNLGQPMYIPKGNARKQGEAECLAAGRQPGKYSRIREMPISGEEVNYDPKTGLGTYCQPLDTKTLTSNDPAQPKGPTIEEMLQEVEDQFAKTDIQAPVLKQSYNLGSGQGEDNPNVYKNQAVNFYVDAPTARWEGDLMIGHVEMESYPTQMTIQYGNGDEGSFYTMGKPVSRARGEESRKTATSYVYKRSGNFHAYATVSYSGRFRVNGGDWHALDVVLTKETVDPLLIRVWWTDVGRVAGDCSYDDTRWGCKNDPTMGKKDNPNPRLRKADIRTGQRWHLNDNGDGDTEYSLHRDWPDM
>NC_013715.1|WP_044150539.1|1386627_1387344_+|hypothetical-protein
MTSVILTRRAMLSGSAFVGLGALLAACGQQANNEAAATTSAAPSETVSASAAASDAASASATPSPVITRGYSGGSKAPDGEYRSADKYGPAQNVPKPTAPEDGYNEKSLEGLRKTFDAWVQWGNYGIQTGDYAKAREFISPNFSSELEAYESVEKLYRRGGWVIDGIEKFTADGSPWSEDGETYFWKMYRNWNQEIHVEPDGKWTAWDNEDKTNDTLKVKMKHDGQKWSILDFEEFNV
>NC_013715.1|WP_012903704.1|1387673_1388684_+|YeiH-family-putative-sulfate-export-transporter
MSFLSKNWAGLSVCLIISIISWVLGGFLPVVGAPVFAIFIGMILHPFLTSYTQLDAGLTYSSKKLLQYAVILLGFGLSISQVFAVGTSSLPVIISTISIALIIAFFFQRFFNLDTKLATLIGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGSWLHLSNEGFALFAGTAVNDTSSVTATASAWDSLYNANTLEPATIVKLTRTLAIIPIVLFLSYWQSRQQGDNQGVKLKKIFPVFILYFILASLLTTLLTSFGVSTSFFSPLKQLSIFLIIMAMSAIGLKTNLIAMIKSSGKSILLGALCWIAIILTSLGMQLLIGIY
>NC_013715.1|WP_044150542.1|1388776_1388959_+|hypothetical-protein
MLEHIWEFVMYVEPDGSYTEDKNTAEGDDNGAYILKYSDGFWTVVGSLSQEQLKEKGLLK
>NC_013715.1|WP_044150545.1|1389096_1389597_+|Cys-tRNA(Pro)-deacylase
MAKKTKGKKSGAATAAVALLTETNTPFQMREYEHVEGVTSFGEEAAKKLGASEEQVFKTLLIVHEKDFAVAIVPVSGKLNIKAAAAALGWKSASMCDPKVAERRTGYVVGGISPLGQKTPSPTLLDESAQLFDTIMVSGGKRGLDVELAPDDLLKLTNGKYADIRA
>NC_013715.1|WP_044150547.1|1389671_1390118_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MGNSLPGVGAIAKNWREVLKPEEYAVLREGGTERAFTGEYWNTHTEGVYSCRACGTELFRSDQKFDSHCGWPSFFAPLAEDRVRYLEDTTFGMRRVEVRCAACDSHLGHVFEGEGYPTPTDLRYCINSVCLTLTPAGEASADEAESAE
>NC_013715.1|WP_044150550.1|1390332_1391598_+|ribonuclease-D
MSTAAEQNAAGTPQLTLNGIEVPDVVPLEAPSSPIPTLITTESGLRRAAEQLAAASGPVAVDTERAQGIRYGSRAFLVQLKREDQLYLIDPEAFKDLRIINDALADAEWVIHAAIQDFPSLDMLGMRPNRLFDTELGARLAGLERVNLGATVEELLGYKLAKKHSKEDWSRRPLPESWLNYALLDVDVLIDLRDALEDLLRQQGKLQYALEEFEYLCKTPVKDPTDQPERWRKTKGRTMLRSVKQLTALRNLWHERDSLARKKDVDAKRLLPDSAIVEAARTMPRNVPAVMAIPGFQTRGLRREGPRWVRAIAAAARGENAVPFTLPSTAPPPLKAWESKRPENLALFTEVRQAIDELSEELTIPAQNLITTDYVRRLCWEPPARFDEQTLRDALAEYGARPWQTGLVAPVIAPIFARHLG
>NC_013715.1|WP_044150551.1|1391800_1392331_+|Rieske-(2Fe-2S)-protein
MPAPNGCCRSQKACASPAAVESNAVDTAVDTAETESSARVFSRRATLVTGAVASGALLASCAEGDGAVTAPEGTVEVGFASAVGVGKTARLTHGSTTVIVSQPSSGEYKAFSTVCTHQGCQVQVQDSNRIVCPCHGSEYAVADGSVVHGPAEAPLTSYPVQVKGGKIFVSGTTNNS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_8

1380324-1382397

Unclear

Consensus_repeat	Method
TGAGGCCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAATC	PILER-CR
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CRISPRCasFinder
CCTCAATGAAAGNCCNTCCNAAAAGGAAGGGAAA	CRT
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	PILER-CR

28 spacers

cas1,cas2,csb1gr7,csb2gr5,cas3,csb3

The CRISPR arrays of NC_013715_8

>merge|NC_013715|8|1380324-1382397|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
TGAGTCCTCAATAAAAGCCCCTCCGAAAAGGAAGGGAAATACCCCAAAAACAACCCAACAACCCGCGCATGGGTACGGCCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAAACCCCGTCATGGAAGACCACGCGCGGGTGTGCAGCGTTGAAGCCTCAATGAAAGCCCCTCCAAAAAGAAGGGAAATCTTGAACGCGGCCGCATAGATCAGCGAGGCCACGGGCTTGCCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAATTGAGTCTTCACCATTTCGCCGCCGCTAATAAACGGCTTGCCTCAATGAAAGCCCTCCCAATAGGAAGGGAAATTTTGGTGCGGGTGTGCTCTCCGCGGCGGCCGTCCCAGCCTCAATGAAAGCCCCTCCAAAAAGGAAGGGAAATTGGAGGGCCTCGCTAACGCTGGTTCGACGGACACGGCCTCAATGAAAGCCCTCCCAAAAAGGAAGGGAATTGGAGTGCCTAGGCTGAGGATTTGAAAGAGCCTTCTGGGCCTCAAAGAAAGCCCCTCCGAATAGGAAGGAAAATGAACCAGACGTAGCCGTTGTTAGCGACATAGCCGTCGCCTCGATGAAAGCCCTTCCGGAAAGGAAGGGAAAATGACCTGGTCAGCAGGAATAGTGCGGGTGCCGTAGGCGCCTCAATGAAAGCCCTCCCGAAAAGGAAGGGAAATCCGGGGCGGATACTGAGCGGCCCGGCCTTGGCACCGTTGGCCTCAATGAAAGCCCTTCCCAAAAGGAAGGGAAAGAGCTGGTGGGTTGCCAGGGTGGCATGCACAGTCGCGCCTCAATGAAACCCCTTCCAAAAAAGGAAGGGAAATCGCGCCGCTGACGGACGATAACGGCAACCCGATCGAGCCTCAATGAAAGCCCCTCCAAGAAGAAGGGAAAATTCGCCGTTGCGCTCAGGGAAATAATAGCGGAACGCCTCGCCTCAATGAAAGCCCTTCCCAGAAGGAAGGGAAATTGGCCCGACAATTGAGAACCTGCGGGTTTGCGGGCCTCAATGAAAGCCCTTCCAAAAAGGAAGGGAAATCCTGGGCGACCAAGATCTTGTCCGCAGGCTGCTGCTTGCCTCAATGAAAGTCCCTCCCAAAAGGAAGGGAAATCTGCGTTGGCTCGTGAGGGCATGCTCGGCGAATCTGACCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATGTAAAGTGCTTGACGCGCCCCGCGCGGGTGCTATGAGCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATTTACTAGATATTTTTCTCAGCCGCTTTGTTTTGCGCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATCCAGACAGAGACCTCAGACATGCCGCCACTGCGAAGTACCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATGGTCTAGAGTTCGCCACTCGATTTGTAGTACGCATGTGGGCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATGGTCTAGAGTTCGCCACTCGATTTGTATACGCATGTGGGCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATACCAACACCACCAGCGCCAACAAGGAGTCTGCTAACCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATTAGCGGTCAATGCGGCATCATTCAAGCTGATACCCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATTATTGCGTCGAGGTGGTCGGCGGTGAATGAGAGCGGCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATTCAGCCCCCACTAACCGACCCGCTCTCCACCTACACCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATCTAGCCAAGAAGGTGGCTAAGCTTGAATCTGAGCCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATAGCGCAATCTCTGAACGTTCATCCATGCCAGAGCCGCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAATCCTTCGATGCGAGAGTGTCGCCGGTAATCGCGTTCGGCCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT

>NC_013715|8|3|1380324-1380511|PILER-CR
TGAGTCCTCAATAAAAGCCCCTCCGAAAAGGAAGGGAAATACCCC	AAAAACAACCCAACAACCCGCGCATGGG
TACGGCCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAAACCCCGT	CATGGAAGACCACGCGCGGGTGTGCAGCGTTGAAG
CCTCAATGAAAGCCCCTCCAAAAAGAAGGGAAATCTTGAACGCGGCCGCATAGATCAGCGAGGCCACGGGCTTGCCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAATTGAGTCTTCACCATTTCGCCGCCGCTAATAAACGGCTTGCCTCAATGAAAGCCCTCCCAATAGGAAGGGAAATTTTGGTGCGGGTGTGCTCTCCGCGGCGGCCGTCCCAGCCTCAATGAAAGCCCCTCCAAAAAGGAAGGGAAATTGGAGGGCCTCGCTAACGCTGGTTCGACGGACACGGCCTCAATGAAAGCCCTCCCAAAAAGGAAGGGAATTGGAGTGCCTAGGCTGAGGATTTGAAAGAGCCTTCTGGGCCTCAAAGAAAGCCCCTCCGAATAGGAAGGAAAATGAACCAGACGTAGCCGTTGTTAGCGACATAGCCGTCGCCTCGATGAAAGCCCTTCCGGAAAGGAAGGGAAAATGACCTGGTCAGCAGGAATAGTGCGGGTGCCGTAGGCGCCTCAATGAAAGCCCTCCCGAAAAGGAAGGGAAATCCGGGGCGGATACTGAGCGGCCCGGCCTTGGCACCGTTGGCCTCAATGAAAGCCCTTCCCAAAAGGAAGGGAAAGAGCTGGTGGGTTGCCAGGGTGGCATGCACAGTCGCGCCTCAATGAAACCCCTTCCAAAAAAGGAAGGGAAATCGCGCCGCTGACGGACGATAACGGCAACCCGATCGAGCCTCAATGAAAGCCCCTCCAAGAAGAAGGGAAAATTCGCCGTTGCGCTCAGGGAAATAATAGCGGAACGCCTCGCCTCAATGAAAGCCCTTCCCAGAAGGAAGGGAAAT	TGGCCCGACAATTGAGAACCTGCGGGTTTGCGGG
CCTCAATGAAAGCCCTTCCAAAAAGGAAGGGAAAT	CCTGGGCGACCAAGATCTTGTCCGCAGGCTGCTGCTTG
CCTCAATGAAAGTCCCTCCCAAAAGGAAGGGAAAT	CTGCGTTGGCTCGTGAGGGCATGCTCGGCGAATCTGAC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GTAAAGTGCTTGACGCGCCCCGCGCGGGTGCTATGAGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TTACTAGATATTTTTCTCAGCCGCTTTGTTTTGCGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CCAGACAGAGACCTCAGACATGCCGCCACTGCGAAGTAC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GGTCTAGAGTTCGCCACTCGATTTGTAGTACGCATGTGGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GGTCTAGAGTTCGCCACTCGATTTGTATACGCATGTGGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	ACCAACACCACCAGCGCCAACAAGGAGTCTGCTAACC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TAGCGGTCAATGCGGCATCATTCAAGCTGATACCC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TATTGCGTCGAGGTGGTCGGCGGTGAATGAGAGCGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TCAGCCCCCACTAACCGACCCGCTCTCCACCTACACC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CTAGCCAAGAAGGTGGCTAAGCTTGAATCTGAGCC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	AGCGCAATCTCTGAACGTTCATCCATGCCAGAGCCGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CCTTCGATGCGAGAGTGTCGCCGGTAATCGCGTTCGGC


>NC_013715|8|8|1380328-1382397|CRISPRCasFinder
TCCTCAATAAAAGCCCCTCCGAAAAGGAAGGGAAAT	ACCCCAAAAACAACCCAACAACCCGCGCATGGGTACG
GCCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAAAC	CCCGTCATGGAAGACCACGCGCGGGTGTGCAGCGTTGAA
GCCTCAATGAAAGCCCCTCCAAAAAGAAGGGAAATC	TTGAACGCGGCCGCATAGATCAGCGAGGCCACGGGCTT
GCCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAAT	TGAGTCTTCACCATTTCGCCGCCGCTAATAAACGGCTT
GCCTCAATGAAAGCCCTCCCAATAGGAAGGGAAATT	TTGGTGCGGGTGTGCTCTCCGCGGCGGCCGTCCCA
GCCTCAATGAAAGCCCCTCCAAAAAGGAAGGGAAAT	TGGAGGGCCTCGCTAACGCTGGTTCGACGGACACG
GCCTCAATGAAAGCCCTCCCAAAAAGGAAGGGAATT	GGAGTGCCTAGGCTGAGGATTTGAAAGAGCCTTCTGG
GCCTCAAAGAAAGCCCCTCCGAATAGGAAGGAAAAT	GAACCAGACGTAGCCGTTGTTAGCGACATAGCCGTC
GCCTCGATGAAAGCCCTTCCGGAAAGGAAGGGAAAA	TGACCTGGTCAGCAGGAATAGTGCGGGTGCCGTAGGC
GCCTCAATGAAAGCCCTCCCGAAAAGGAAGGGAAAT	CCGGGGCGGATACTGAGCGGCCCGGCCTTGGCACCGTTG
GCCTCAATGAAAGCCCTTCCCAAAAGGAAGGGAAAG	AGCTGGTGGGTTGCCAGGGTGGCATGCACAGTCGC
GCCTCAATGAAACCCCTTCCAAAAAAGGAAGGGAAA	TCGCGCCGCTGACGGACGATAACGGCAACCCGATCGA
GCCTCAATGAAAGCCCCTCCAAGAAGAAGGGAAAAT	TCGCCGTTGCGCTCAGGGAAATAATAGCGGAACGCCTC
GCCTCAATGAAAGCCCTTCCCAGAAGGAAGGGAAAT	TGGCCCGACAATTGAGAACCTGCGGGTTTGCGG
GCCTCAATGAAAGCCCTTCCAAAAAGGAAGGGAAAT	CCTGGGCGACCAAGATCTTGTCCGCAGGCTGCTGCTT
GCCTCAATGAAAGTCCCTCCCAAAAGGAAGGGAAAT	CTGCGTTGGCTCGTGAGGGCATGCTCGGCGAATCTGA
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GTAAAGTGCTTGACGCGCCCCGCGCGGGTGCTATGAG
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TTACTAGATATTTTTCTCAGCCGCTTTGTTTTGCG
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CCAGACAGAGACCTCAGACATGCCGCCACTGCGAAGTA
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GGTCTAGAGTTCGCCACTCGATTTGTAGTACGCATGTGGG
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GGTCTAGAGTTCGCCACTCGATTTGTATACGCATGTGGG
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	ACCAACACCACCAGCGCCAACAAGGAGTCTGCTAAC
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TAGCGGTCAATGCGGCATCATTCAAGCTGATACC
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TATTGCGTCGAGGTGGTCGGCGGTGAATGAGAGCGG
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TCAGCCCCCACTAACCGACCCGCTCTCCACCTACAC
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CTAGCCAAGAAGGTGGCTAAGCTTGAATCTGAGC
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	AGCGCAATCTCTGAACGTTCATCCATGCCAGAGCCG
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CCTTCGATGCGAGAGTGTCGCCGGTAATCGCGTTCGG
CCCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT

>NC_013715|8|3|1380329-1382396|CRT
CCTCAATAAAAGCCCCTCCGAAAAGGAAGGGAAA	TACCCCAAAAACAACCCAACAACCCGCGCATGGGTACGG
CCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAAA	CCCCGTCATGGAAGACCACGCGCGGGTGTGCAGCGTTGAAG
CCTCAATGAAAGCCCCTCCAAAAAGAAGGGAAAT	CTTGAACGCGGCCGCATAGATCAGCGAGGCCACGGGCTTG
CCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAA	TTGAGTCTTCACCATTTCGCCGCCGCTAATAAACGGCTTG
CCTCAATGAAAGCCCTCCCAATAGGAAGGGAAAT	TTTGGTGCGGGTGTGCTCTCCGCGGCGGCCGTCCCAG
CCTCAATGAAAGCCCCTCCAAAAAGGAAGGGAAA	TTGGAGGGCCTCGCTAACGCTGGTTCGACGGACACGG
CCTCAATGAAAGCCCTCCCAAAAAGGAAGGGAAT	TGGAGTGCCTAGGCTGAGGATTTGAAAGAGCCTTCTGGG
CCTCAAAGAAAGCCCCTCCGAATAGGAAGGAAAA	TGAACCAGACGTAGCCGTTGTTAGCGACATAGCCGTCG
CCTCGATGAAAGCCCTTCCGGAAAGGAAGGGAAA	ATGACCTGGTCAGCAGGAATAGTGCGGGTGCCGTAGGCG
CCTCAATGAAAGCCCTCCCGAAAAGGAAGGGAAA	TCCGGGGCGGATACTGAGCGGCCCGGCCTTGGCACCGTTGG
CCTCAATGAAAGCCCTTCCCAAAAGGAAGGGAAA	GAGCTGGTGGGTTGCCAGGGTGGCATGCACAGTCGCG
CCTCAATGAAACCCCTTCCAAAAAAGGAAGGGAA	ATCGCGCCGCTGACGGACGATAACGGCAACCCGATCGAG
CCTCAATGAAAGCCCCTCCAAGAAGAAGGGAAAA	TTCGCCGTTGCGCTCAGGGAAATAATAGCGGAACGCCTCG
CCTCAATGAAAGCCCTTCCCAGAAGGAAGGGAAA	TTGGCCCGACAATTGAGAACCTGCGGGTTTGCGGG
CCTCAATGAAAGCCCTTCCAAAAAGGAAGGGAAA	TCCTGGGCGACCAAGATCTTGTCCGCAGGCTGCTGCTTG
CCTCAATGAAAGTCCCTCCCAAAAGGAAGGGAAA	TCTGCGTTGGCTCGTGAGGGCATGCTCGGCGAATCTGAC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TGTAAAGTGCTTGACGCGCCCCGCGCGGGTGCTATGAGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TTTACTAGATATTTTTCTCAGCCGCTTTGTTTTGCGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TCCAGACAGAGACCTCAGACATGCCGCCACTGCGAAGTAC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TGGTCTAGAGTTCGCCACTCGATTTGTAGTACGCATGTGGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TGGTCTAGAGTTCGCCACTCGATTTGTATACGCATGTGGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TACCAACACCACCAGCGCCAACAAGGAGTCTGCTAACC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TTAGCGGTCAATGCGGCATCATTCAAGCTGATACCC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TTATTGCGTCGAGGTGGTCGGCGGTGAATGAGAGCGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TTCAGCCCCCACTAACCGACCCGCTCTCCACCTACACC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TCTAGCCAAGAAGGTGGCTAAGCTTGAATCTGAGCC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TAGCGCAATCTCTGAACGTTCATCCATGCCAGAGCCGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA	TCCTTCGATGCGAGAGTGTCGCCGGTAATCGCGTTCGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAA

>NC_013715|8|4|1381278-1382397|PILER-CR
	AAAAACAACCCAACAACCCGCGCATGGG
TACGGCCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAAACCCCGT	CATGGAAGACCACGCGCGGGTGTGCAGCGTTGAAG
CCTCAATGAAAGCCCCTCCAAAAAGAAGGGAAATCTTGAACGCGGCCGCATAGATCAGCGAGGCCACGGGCTTGCCTCAATGAAAGCCCCTCCGAAAAGGAAGGGAAATTGAGTCTTCACCATTTCGCCGCCGCTAATAAACGGCTTGCCTCAATGAAAGCCCTCCCAATAGGAAGGGAAATTTTGGTGCGGGTGTGCTCTCCGCGGCGGCCGTCCCAGCCTCAATGAAAGCCCCTCCAAAAAGGAAGGGAAATTGGAGGGCCTCGCTAACGCTGGTTCGACGGACACGGCCTCAATGAAAGCCCTCCCAAAAAGGAAGGGAATTGGAGTGCCTAGGCTGAGGATTTGAAAGAGCCTTCTGGGCCTCAAAGAAAGCCCCTCCGAATAGGAAGGAAAATGAACCAGACGTAGCCGTTGTTAGCGACATAGCCGTCGCCTCGATGAAAGCCCTTCCGGAAAGGAAGGGAAAATGACCTGGTCAGCAGGAATAGTGCGGGTGCCGTAGGCGCCTCAATGAAAGCCCTCCCGAAAAGGAAGGGAAATCCGGGGCGGATACTGAGCGGCCCGGCCTTGGCACCGTTGGCCTCAATGAAAGCCCTTCCCAAAAGGAAGGGAAAGAGCTGGTGGGTTGCCAGGGTGGCATGCACAGTCGCGCCTCAATGAAACCCCTTCCAAAAAAGGAAGGGAAATCGCGCCGCTGACGGACGATAACGGCAACCCGATCGAGCCTCAATGAAAGCCCCTCCAAGAAGAAGGGAAAATTCGCCGTTGCGCTCAGGGAAATAATAGCGGAACGCCTCGCCTCAATGAAAGCCCTTCCCAGAAGGAAGGGAAAT	TGGCCCGACAATTGAGAACCTGCGGGTTTGCGGG
CCTCAATGAAAGCCCTTCCAAAAAGGAAGGGAAAT	CCTGGGCGACCAAGATCTTGTCCGCAGGCTGCTGCTTG
CCTCAATGAAAGTCCCTCCCAAAAGGAAGGGAAAT	CTGCGTTGGCTCGTGAGGGCATGCTCGGCGAATCTGAC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GTAAAGTGCTTGACGCGCCCCGCGCGGGTGCTATGAGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TTACTAGATATTTTTCTCAGCCGCTTTGTTTTGCGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CCAGACAGAGACCTCAGACATGCCGCCACTGCGAAGTAC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GGTCTAGAGTTCGCCACTCGATTTGTAGTACGCATGTGGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	GGTCTAGAGTTCGCCACTCGATTTGTATACGCATGTGGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	ACCAACACCACCAGCGCCAACAAGGAGTCTGCTAACC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TAGCGGTCAATGCGGCATCATTCAAGCTGATACCC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TATTGCGTCGAGGTGGTCGGCGGTGAATGAGAGCGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	TCAGCCCCCACTAACCGACCCGCTCTCCACCTACACC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CTAGCCAAGAAGGTGGCTAAGCTTGAATCTGAGCC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	AGCGCAATCTCTGAACGTTCATCCATGCCAGAGCCGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT	CCTTCGATGCGAGAGTGTCGCCGGTAATCGCGTTCGGC
CCTCAATGAAAGTCCCTCCGAAAAGGAAGGGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_044150539.1\|1386627_1387344_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371678
NC_013715.1\|WP_012903696.1\|1371863_1373453_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NC_013715.1\|WP_044150542.1\|1388776_1388959_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012903704.1\|1387673_1388684_+\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NC_013715.1\|WP_044150531.1\|1373454_1374741_-\|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl\|CDD\|378223
NC_013715.1\|WP_044150533.1\|1377283_1378894_-\|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_013715.1\|WP_044150534.1\|1382773_1383829_-\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|224402
NC_013715.1\|WP_044150545.1\|1389096_1389597_+\|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl\|CDD\|237976
NC_013715.1\|WP_012903691.1\|1359291_1361484_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|271320
NC_013715.1\|WP_044150550.1\|1390332_1391598_+\|ribonuclease-D	unknown	unknown	gnl\|CDD\|223426
NC_013715.1\|WP_012903693.1\|1365486_1366566_-\|S-layer-homology-domain-containing-protein	unknown	unknown	unknown
NC_013715.1\|WP_052265077.1\|1376984_1377287_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_013715.1\|WP_012903703.1\|1385256_1386441_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_044150551.1\|1391800_1392331_+\|Rieske-(2Fe-2S)-protein	unknown	unknown	gnl\|CDD\|239550
NC_013715.1\|WP_012903695.1\|1369033_1371871_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NC_013715.1\|WP_044150536.1\|1384526_1385255_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235082
NC_013715.1\|WP_044150547.1\|1389671_1390118_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|376583
NC_013715.1\|WP_044150529.1\|1367058_1367814_+\|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl\|CDD\|377432
NC_013715.1\|WP_012903694.1\|1367969_1369034_-\|aldehyde-dehydrogenase	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
NC_013715.1\|WP_012903692.1\|1362056_1365116_-\|peptidase	unknown	unknown	gnl\|CDD\|271320

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_012903696.1\|1371863_1373453_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.89736e-72
NC_013715.1\|WP_012903704.1\|1387673_1388684_+\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	1.23896e-93
NC_013715.1\|WP_044150531.1\|1373454_1374741_-\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.2373e-26
NC_013715.1\|WP_044150533.1\|1377283_1378894_-\|CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.7994e-105
NC_013715.1\|WP_044150536.1\|1384526_1385255_+\|hypothetical-protein	gnl\|CDD\|235082	PRK02888, PRK02888, nitrous-oxide reductase; Validated.	0.000698444
NC_013715.1\|WP_044150545.1\|1389096_1389597_+\|Cys-tRNA(Pro)-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	2.04731e-69
NC_013715.1\|WP_012903691.1\|1359291_1361484_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	3.99744e-15
NC_013715.1\|WP_012903694.1\|1367969_1369034_-\|aldehyde-dehydrogenase	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	1.88422e-170
NC_013715.1\|WP_052265077.1\|1376984_1377287_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.05371e-19
NC_013715.1\|WP_044150550.1\|1390332_1391598_+\|ribonuclease-D	gnl\|CDD\|223426	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis].	3.6169e-67
NC_013715.1\|WP_044150551.1\|1391800_1392331_+\|Rieske-(2Fe-2S)-protein	gnl\|CDD\|239550	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.	2.78698e-24
NC_013715.1\|WP_012903695.1\|1369033_1371871_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	6.29023e-87
NC_013715.1\|WP_044150539.1\|1386627_1387344_+\|hypothetical-protein	gnl\|CDD\|371678	pfam11702, DUF3295, Protein of unknown function (DUF3295). This family is conserved in fungi but the function is not known.	0.0083202
NC_013715.1\|WP_044150547.1\|1389671_1390118_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	1.17533e-76
NC_013715.1\|WP_044150529.1\|1367058_1367814_+\|nicotinamide-mononucleotide-transporter	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	1.87766e-09
NC_013715.1\|WP_044150534.1\|1382773_1383829_-\|cell-division-protein-ZapE	gnl\|CDD\|224402	COG1485, COG1485, Predicted ATPase [General function prediction only].	2.39553e-64
NC_013715.1\|WP_012903692.1\|1362056_1365116_-\|peptidase	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	2.94171e-14

>NC_013715.1|WP_044150533.1|1377283_1378894_-|CRISPR-associated-endonuclease-Cas4/Cas1
MSTPYSAGDELPISLVMHTVYCPRRAWIESNGEKTDTSQMQEGQSAHKRVDDPKTSRGTQQRAVTISSTRLGLTGRCDAVEPQEDGSTRIIEYKATPVRRNASVTPAHRVQLALQKICLEEAGETVSECAVHFTNHNKTVPVDISDEDIRTAEEYVHTTRALIDNPTAPQPLEDSPRCSWCSHISVCLPDESRGKENITRVVASNPDSQVAHLTTQGSRATVQQGRLIVQHLGETISSVPLERVHSLVVHGNIDVSSALLRELMWRNCTIIWCSSTGRVYGWSQPGTGPNGLARVQQHVLSAQGYLPIASAMIASKIANQATLLRRNGHAADVCRTMRDIQKNTPQATSIPELLGLEGEAASLYFGNFATMLKEDALTELGWIWTGRQGRGANDPINILLNYAYGMLSSECIRGILTCGLDPHAGFLHSSSRNKPALALDLMEEFRAVIADSVVVSLINRKQVKAAHFTTVGGSYRLTPEGRKTIIAAFEKRMVTEITHPTYGYSVTWRRAIEVQARMLLGVINGTTREYTGVTVR
>NC_013715.1|WP_052265077.1|1376984_1377287_-|CRISPR-associated-endonuclease-Cas2
MMRDDARRTLIAYDVPSDRRRTKLAKLILSYGDRIQYSVFIVDAAPAKVRRIKDEVQELIDPDEDSVLFCDLGLLARLDEPTFSYIGRAREVTESDALIL
>NC_013715.1|WP_044150531.1|1373454_1374741_-|type-I-U-CRISPR-associated-protein-Cas7
MSQNESQTIIALADLIENVKLGGGSVITSITEQEPAAGPHAPLAPAKFVDGKGSDSKSVFAYEIRYIVEKPEDQDEPEKAVKGKPQKVVLIDSKQSELNRAEAAIEQGRQYGDEAVVKIPRAVVTYQTENGPVEYTDMELSHRIFDGHFRAGHIDGKPITENDQYRALRNCTPADMSALLNTAPAALLFGAWDSTRKSNQVRLRSALVGEIIGVLADQEPGAEHRQARRGGARVDAVAASVKLDAKELNSLVDDQEAELSAKNVAARRKEVKTAKADARISASTLGLGSIPPTLEETGAVACRRIIRSWVLSLATLRQLRFGTDETKNIAARALLAALGLNAIARAERELYIRANCDLIESSAPVVTLDQRFGKKKTFAPLTVEHTDQLLLEAIENAKKAGVADWNGQTFNVDGNPIIIKNATAEDAE
>NC_013715.1|WP_012903696.1|1371863_1373453_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MTNLGILARFPLGVYQGHKADGSPDAFPDPARLQAALLSAAAQGPHAIIENGQLAPSEESLKALKWLEENPPTGLQIPDMCPVYRSRNKMSRFMYREVAYSEKDGRQTERRAVSDGWAVSDTIGWQYDKVPADIAETITQLCGEVPSLGEASSFTALYTGEVEPTHTIDTKSGPFEAGGMPVRVPVPGRTDALMRAHAEAYPAKVPTKAGDKTAMSDTMRPSPVPTAGLGSIKYQPVEAETSTSPWEYLWLLEVDGEELKPEQYVKTSSLLHKALVAAAGFGAPSLITGRYPKGHKPANSLALQYLPARYLPDYLRREVKSKGVLLVLVPANAPTDEAVELGIALRSVETLYAQDFPRLTVKLRQKRLPAQGFWDAPKTGYKRLWRTLSAAVPESRVFNRPKKTETKAWTFADAALLSIAYVWRGSFEVPEAETSRERIRSLRNQVEEKAEAKVLEAHRVTQNPAAYAYKLPRTLPAEPWRGVVDLGNLATDTTLVAIGQSRHMGGGLLVPFDVPTEEYDRRKKEEKHD
>NC_013715.1|WP_012903695.1|1369033_1371871_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTSPATKLPSITRDEFGEFFAALDAALDAARNNAPNEAPKEKQKRYPFSWQEEVLDHICEHGVWPERINAPTGSGKSSVVDIHLFANALAAVGAAPRVPRRLCVTVGRRALVDSQATRADKILGCLEDALADGSGEPDILRRVAEALQSFQTRNDEKGSKPFETGHIRGELSNRNLPVTDISACAIIAATPDMYGSRALFRGYGSTKAARPRETALLAMDTVMVLDEAHMNRQLLHTTQRIAELQKREANLGVPTLQVIETTATPSTEDSDSTTLGVDIEALDSPNDEELRKRVHSHKELVLRPIDKWDGKPGNAATVNAAVDAIKDFLAHREAGEGSDEAHTVGCIVNHVRTAISIKEKLTKDKVLGKDEVELLVGRMRPYDLQKLHPDLFTTEGDESVKVVVATQTLEVGIDVDFADLVTELAPASSLAQRFGRVNRLGRRTDSKVVVIRPTNGDSVKKDAPPYKAVDLSNAYGWLEALNDAENPSVNPAAMVKNPPVQSSPERLLYQRPEWSDLLEFSRTDENPYDEPDLDLWLHDSLDAETAMGGVIVRDNLPSNTSAAMEILKTSYFAPSDEETFPANLKILHEILDYQDEHGVKPRKFLYRQGEISLWQDADHEEESRQSLAPGDVLLLDTGSVPFTNQGIAVTQRELPSKKDELEAVPFPKGIKLYVYEKCADREKDFREYLGLSPEEVAELLDSQSSGSETRIASELSIEAEDGQEVISWYAVVTDEESVEDSDIAQELAPTDPVLLDDHQNDVAERTRQLAENLGLAPEFSEALELAAKYHDEGKRDLRFQQMLGADLQADALAKSGHRSVAEAYRARSRSALPRGWRHEQLSALMVAASPEKVGEHRDLVLRIIGCSHGHGRFSFAHDAGFLLKEGYLPEGTDYEALKEQATRLFNVGYWDTLMEQTSRTYGPYATAYLEAVERAADAQISREGH
>NC_013715.1|WP_012903694.1|1367969_1369034_-|aldehyde-dehydrogenase
MATLTIAGDYTSALTHFALYGLSLMVEQKHPGTVTVGWSQEGQPRAQMHAEGVSEEEIAECVHSYVSSLAAEDSWVNVDQSYGAGKEAAVFSPFSPRIRGIDAEKYPDDWASHQKTRQAHLDALMERDDLLSLLWISGLGEPAYWRFEAKAPRPDHGASRWEMKTRNKGQEFVKDRLRLMCADLATWEPSAMLSGITGQTLHDSLDKKPDSRTGTGFTVPQPTDTALAFCALVGIANFPVIHQIHRIGVTPGAYPYNALHPRLMVLPVSSGRVTPARLRTVLRSHPYRRVVDEVGKAMERGSLSPDIFVSELADEKAILREKGVQAFVAFPIAKVGSDSAPERQVLKGSAIPLG
>NC_013715.1|WP_044150529.1|1367058_1367814_+|nicotinamide-mononucleotide-transporter
MEAKEFSYEKALLFFAKSKYADLFGVALVIAIAVASGYLSTTLDKYVDWGPITKFIPLGVISVINVGISMMSTRLTGRLSNIGNVLGIINTALSCAIDYIMGNKAAIITYPVTFIVYTFAIRRWQNSERGKALEPPTGTKGLLIISGIVAGSFAFSLAANYIGYRGQMTFLFWITTVVFGLSLSANILNALKLTMQWQFWFLYNAVQCVKSLTQGNFANVGKYIFYIINSVAALLLWTRSGTAAKGAVAVA
>NC_013715.1|WP_012903693.1|1365486_1366566_-|S-layer-homology-domain-containing-protein
MPLLTHRLSRRFFVKGASAAAAAGALTLQAQAAQADEAPTNIAPATEETKGPRLVIQRATITETGMTVNYTAHGLREFLTEGTTLTVRHGYVRNDSFETLRSWPLTPEFDGDADSFSGSDQFPIELMQGEGFDHALQLDICSDPWGQEITHQIAARIPVAETKILKTSFEDVPDNHPFAEDIRMANQKKWLMPNPQTGAFEPDRPVTREELIALLNHAAGHAGVSENSEVAPFADAAGRPTANALHWARDRKITEPLTGGDKIDPTAPVSHEELAAVLFQYNAEVQLTEMNEAAGSRFRDVLGAGTLHRYVAWAGANDIVLDSSGVFNPTAPTTRAELARFIRRYKLQNLLFTDFSYVS
>NC_013715.1|WP_012903692.1|1362056_1365116_-|peptidase
MNLASSKAFKGLAVGSLALAISGVATIPASFAAESTPVASQSTDARTITDKAMAKITQGLPGQFQVAYSKKTNKIWVAGTADRDKHVSTIARIDANSLKIEAVAELPIVKNDKGYQYDAAYGITVDDVDGTVWVTNTTDNSVSVYDQATMQQVWTTAGIAETDPNWIEHPRSVLVDHESGKAFVTGRFFVSAIDLKTKQVEKIQLEGAPDGGTRYISMNILVDGGKLYVPERTGGKIFVIDTKTFKVESSFDTKGNAEGEVRPSDIAIDHSQNEIYVSSQGVKGANSGVSIYDATTHEFKKFIPVGTQALSLDNDEANDLVYVSDFGTGKVGVIDGGAADKLIAEVAMNGGKANDLVVLPNGSVVAVDKQAGATATVPYVLDGTTGTVNTSNKVTSKPSKDKQGNDVPAKTTDIQANSILKFKVTATAGDNSEVKQVTPETREFQGYPATATKTKAADSTAPSTEAHRTVDANGSVANIIQGLPGQFQVGYSKKNHKLFVPTVGARGNLASSLARVDADTLQTEAFAELPVKKNDKGQYGYTSAYGVTVDDVDGTVWVTNTTDNSVAVYDQQTLKLIWSNEGVKEGDPNWIEHPRSVLVDHESGKAFVTGRFFVSAIDLKTKQVEKIQLEGAPDGGTRYISMNLFLDGGKLYVPERTGGKLFVVDTKTFKVEKTIQTQGEDSTVEVRPSDVAVDRSLGEIYVSSQGVKGVNSGISVYDLRTGDFKKFVKFGTQALALEHDEDSDLVYVTDFGTGKVAVFDGRADEVIGEVEMNGAAANDVTLLKDGSVLVLDKKDRDEKVTLPYVLNGTTGEITTASEYTTLPGKDRQGNDVPASVQQLKANSILKFKVGLKDTDASAAPVGITPTSLQFAGYPTVTGVKAEDSKPADPKPADPKPADPKPADPKVEDKKAEDKKSEDVKSEDKKSDAKTGAQDSKSAPDAVKADKSGSAVKNGGSSAGGSDNLGGGSSVAKSDAGSSQAGSSRGALANTGANAVMPLVAFASVALIAGAALVVRRRKA
>NC_013715.1|WP_012903691.1|1359291_1361484_-|LPXTG-cell-wall-anchor-domain-containing-protein
MNLTPSSGKALKGLAVGSLALAISGAAMIPASFAAPNTANQTATPSASAPSTASLSRVVDTSASVAQITQGLPGQYQVAYSKATNKIWMVGVGARGDLASTIARVNADTLQIEEVAALPFELDKNGEFGYISAYGITVDDVSGTVWVTNTTDNSLSVFDQNTMEQIWTNHGIAESDPNWIEHPRSVLVDHNSGKVFVTGRYYVSAIDMKTFEVTKLQLEGAPNGGTRYVGMNMTVDGDKLYVPERTGGKVFVINTKTFKTEQVIQTRGENSSVEVRPSDVTIDHSENEIYVSSQGVDGVNSGISVYDLTTGAFKKFVKFGTQALSMENDEARDLVYVTDFGTGKIAIFDAKTDRVIGEVEMNGGKANDLTITEDGSVIAVDKQDIANTTAAVPYVLNAKTGDGSLTDTYTSKATVDRNGKTVPSSQQKLVPNSIVKFYAEVSEGEFTSTATINPAKVPFQGYPKQATAVLIDPTLNFAEGTVDITRPYTFHVSGYDYDKPPAEGLRLFLVKEGEWSMGYDKLTDSELANIQKVSTIVPASAFVYNSRTGKYSFDATLRVPANTMQYSQGYLLGTVTAGSDVATNRNYDSAVSLIVNDAKDAGNADNRDEADEPAFPTNASASPSASAAVAEKPAADQPKGEQPKAEEASDQLGTTAKTAPLKNSSSVKSDSQPKGSNSDAQVSASATKSVPQSKGSLAKTGAQNVLSLAAVGAFALIAGAAVMVLRRRKA
>NC_013715.1|WP_044150534.1|1382773_1383829_-|cell-division-protein-ZapE
MPTTTVHLTDRIPRVSADELLAGFRPSERFGEVSFDSYIPDPNQPSQAEAVQKLKDFGDKINGGGAGAGFFGRLFGGKKKDSTKAGLYLDGGFGVGKTHLLASLWHYVEGPKAFGTFVEYTNLVGALTFRKTVEALSSYKLVCIDEFELDDPGDTVLMSRLMRELADAGVKLVATSNTLPGALGEGRFAAEDFKREIQVLASQFEVHRVDGEDFRHRGLPAAPEPVADDAFDAKIEEVFGGQTVGVDNFADLVEHLAKVHPSRYRQLIDGLDGIAWRDVHPITEQSVALRFVVLADRLYDKDLPIVSSGVPFDKVFTEEMLAGGYQKKYFRAVSRLTALAREGMLGEEAER
>NC_013715.1|WP_044150536.1|1384526_1385255_+|hypothetical-protein
MDSTIFNRRTLLGSGALVGLGALLAACGQQANNEAAATASAAPSETASASAAASESASASATPSTIRGYSGQSKAPDGEYRKADGYGPAQNVPKPPSRKQYPETQEGALNMINDWTIAHNYAVQTGDCEYAKAYVKPETDEEKFYGYVERLYKRGGWIINGLDKYQLDGQFIYDEKTKEYTLMLKHIWEFVMYVEPDGSYTEDTNTAEGDDSGAYILKYSDGFWTVVGSLSQEQLKEKGSLK
>NC_013715.1|WP_012903703.1|1385256_1386441_+|hypothetical-protein
MFHIREIGSAYILTFAVITSSVFMSVPPANSQECSSDNGHAICLTKEKTPQQNFARKGTLDTRIDSPTAKSSLEIEAENQRKEEEFRRNYDEVKDNLGQPMYIPKGNARKQGEAECLAAGRQPGKYSRIREMPISGEEVNYDPKTGLGTYCQPLDTKTLTSNDPAQPKGPTIEEMLQEVEDQFAKTDIQAPVLKQSYNLGSGQGEDNPNVYKNQAVNFYVDAPTARWEGDLMIGHVEMESYPTQMTIQYGNGDEGSFYTMGKPVSRARGEESRKTATSYVYKRSGNFHAYATVSYSGRFRVNGGDWHALDVVLTKETVDPLLIRVWWTDVGRVAGDCSYDDTRWGCKNDPTMGKKDNPNPRLRKADIRTGQRWHLNDNGDGDTEYSLHRDWPDM
>NC_013715.1|WP_044150539.1|1386627_1387344_+|hypothetical-protein
MTSVILTRRAMLSGSAFVGLGALLAACGQQANNEAAATTSAAPSETVSASAAASDAASASATPSPVITRGYSGGSKAPDGEYRSADKYGPAQNVPKPTAPEDGYNEKSLEGLRKTFDAWVQWGNYGIQTGDYAKAREFISPNFSSELEAYESVEKLYRRGGWVIDGIEKFTADGSPWSEDGETYFWKMYRNWNQEIHVEPDGKWTAWDNEDKTNDTLKVKMKHDGQKWSILDFEEFNV
>NC_013715.1|WP_012903704.1|1387673_1388684_+|YeiH-family-putative-sulfate-export-transporter
MSFLSKNWAGLSVCLIISIISWVLGGFLPVVGAPVFAIFIGMILHPFLTSYTQLDAGLTYSSKKLLQYAVILLGFGLSISQVFAVGTSSLPVIISTISIALIIAFFFQRFFNLDTKLATLIGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGSWLHLSNEGFALFAGTAVNDTSSVTATASAWDSLYNANTLEPATIVKLTRTLAIIPIVLFLSYWQSRQQGDNQGVKLKKIFPVFILYFILASLLTTLLTSFGVSTSFFSPLKQLSIFLIIMAMSAIGLKTNLIAMIKSSGKSILLGALCWIAIILTSLGMQLLIGIY
>NC_013715.1|WP_044150542.1|1388776_1388959_+|hypothetical-protein
MLEHIWEFVMYVEPDGSYTEDKNTAEGDDNGAYILKYSDGFWTVVGSLSQEQLKEKGLLK
>NC_013715.1|WP_044150545.1|1389096_1389597_+|Cys-tRNA(Pro)-deacylase
MAKKTKGKKSGAATAAVALLTETNTPFQMREYEHVEGVTSFGEEAAKKLGASEEQVFKTLLIVHEKDFAVAIVPVSGKLNIKAAAAALGWKSASMCDPKVAERRTGYVVGGISPLGQKTPSPTLLDESAQLFDTIMVSGGKRGLDVELAPDDLLKLTNGKYADIRA
>NC_013715.1|WP_044150547.1|1389671_1390118_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MGNSLPGVGAIAKNWREVLKPEEYAVLREGGTERAFTGEYWNTHTEGVYSCRACGTELFRSDQKFDSHCGWPSFFAPLAEDRVRYLEDTTFGMRRVEVRCAACDSHLGHVFEGEGYPTPTDLRYCINSVCLTLTPAGEASADEAESAE
>NC_013715.1|WP_044150550.1|1390332_1391598_+|ribonuclease-D
MSTAAEQNAAGTPQLTLNGIEVPDVVPLEAPSSPIPTLITTESGLRRAAEQLAAASGPVAVDTERAQGIRYGSRAFLVQLKREDQLYLIDPEAFKDLRIINDALADAEWVIHAAIQDFPSLDMLGMRPNRLFDTELGARLAGLERVNLGATVEELLGYKLAKKHSKEDWSRRPLPESWLNYALLDVDVLIDLRDALEDLLRQQGKLQYALEEFEYLCKTPVKDPTDQPERWRKTKGRTMLRSVKQLTALRNLWHERDSLARKKDVDAKRLLPDSAIVEAARTMPRNVPAVMAIPGFQTRGLRREGPRWVRAIAAAARGENAVPFTLPSTAPPPLKAWESKRPENLALFTEVRQAIDELSEELTIPAQNLITTDYVRRLCWEPPARFDEQTLRDALAEYGARPWQTGLVAPVIAPIFARHLG
>NC_013715.1|WP_044150551.1|1391800_1392331_+|Rieske-(2Fe-2S)-protein
MPAPNGCCRSQKACASPAAVESNAVDTAVDTAETESSARVFSRRATLVTGAVASGALLASCAEGDGAVTAPEGTVEVGFASAVGVGKTARLTHGSTTVIVSQPSSGEYKAFSTVCTHQGCQVQVQDSNRIVCPCHGSEYAVADGSVVHGPAEAPLTSYPVQVKGGKIFVSGTTNNS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_9

1498621-1498697

Orphan

Consensus_repeat	Method
GCGTCAGCGCCGCGGCGAAGCGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013715_9

>merge|NC_013715|9|1498621-1498697|CRISPRCasFinder
GCGTCAGCGCCGCGGCGAAGCGTAAGATTTACTTCCCGCTTTACCCGCGGCCGCGTCAGCGCTGCGGCGAAGCGTAA

>NC_013715|9|9|1498621-1498697|CRISPRCasFinder
GCGTCAGCGCCGCGGCGAAGCGTAA	GATTTACTTCCCGCTTTACCCGCGGCC
GCGTCAGCGCTGCGGCGAAGCGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_012903792.1\|1496769_1497681_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NC_013715.1\|WP_012903785.1\|1485632_1486628_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
NC_013715.1\|WP_012903800.1\|1504214_1504892_-\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|237812
NC_013715.1\|WP_044150579.1\|1478335_1478797_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|200128
NC_013715.1\|WP_005506537.1\|1506258_1506558_-\|YggT-family-protein	unknown	unknown	gnl\|CDD\|376765
NC_013715.1\|WP_044150584.1\|1495182_1496097_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NC_013715.1\|WP_012903789.1\|1493253_1495116_+\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012903797.1\|1499461_1503004_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NC_013715.1\|WP_172633356.1\|1487928_1491273_-\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	unknown	unknown	gnl\|CDD\|237613
NC_013715.1\|WP_012903791.1\|1496252_1496510_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_005506525.1\|1498830_1499286_-\|transcriptional-repressor-NrdR	unknown	unknown	gnl\|CDD\|234774
NC_013715.1\|WP_012903807.1\|1508558_1509407_-\|laccase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376831
NC_013715.1\|WP_012903804.1\|1507669_1508506_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|143483
NC_013715.1\|WP_012903801.1\|1505214_1505754_-\|DivIVA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377456
NC_013715.1\|WP_005506541.1\|1509557_1510739_-\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236468
NC_013715.1\|WP_012903787.1\|1491491_1492832_-\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|223252
NC_013715.1\|WP_012903803.1\|1506568_1507450_-\|cell-division-protein-SepF	unknown	unknown	gnl\|CDD\|377370
NC_013715.1\|WP_044150581.1\|1483981_1485355_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378339
NC_013715.1\|WP_012903798.1\|1503090_1504077_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NC_013715.1\|WP_012903783.1\|1479082_1483597_+\|ATP-dependent-RNA-helicase-HrpA	unknown	unknown	gnl\|CDD\|273900

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_012903792.1\|1496769_1497681_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	5.52167e-133
NC_013715.1\|WP_012903785.1\|1485632_1486628_-\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	1.09479e-08
NC_013715.1\|WP_012903800.1\|1504214_1504892_-\|signal-peptidase-II	gnl\|CDD\|237812	PRK14772, PRK14772, lipoprotein signal peptidase; Provisional.	1.68767e-60
NC_013715.1\|WP_044150579.1\|1478335_1478797_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	2.70836e-12
NC_013715.1\|WP_005506537.1\|1506258_1506558_-\|YggT-family-protein	gnl\|CDD\|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	0.00057454
NC_013715.1\|WP_044150584.1\|1495182_1496097_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	1.55373e-148
NC_013715.1\|WP_012903804.1\|1507669_1508506_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	2.18216e-69
NC_013715.1\|WP_012903797.1\|1499461_1503004_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NC_013715.1\|WP_172633356.1\|1487928_1491273_-\|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase	gnl\|CDD\|237613	PRK14109, PRK14109, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase.	0
NC_013715.1\|WP_012903803.1\|1506568_1507450_-\|cell-division-protein-SepF	gnl\|CDD\|377370	pfam04472, SepF, Cell division protein SepF. SepF accumulates at the cell division site in an FtsZ-dependent manner and is required for proper septum formation. Mutants are viable but the formation of the septum is much slower and occurs with a very abnormal morphology. This family also includes archaeal related proteins of unknown function.	2.33204e-30
NC_013715.1\|WP_005506525.1\|1498830_1499286_-\|transcriptional-repressor-NrdR	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	1.36281e-74
NC_013715.1\|WP_012903807.1\|1508558_1509407_-\|laccase-domain-containing-protein	gnl\|CDD\|376831	pfam02578, Cu-oxidase_4, Multi-copper polyphenol oxidoreductase laccase. Laccases are multi-copper oxidoreductases able to oxidize a wide variety of phenolic and non-phenolic compounds and are widely distributed among both prokaryotes and eukaryotes. There are two main active catalytic sites with conserved histidines that are capable of binding four copper atoms.	4.17377e-53
NC_013715.1\|WP_012903801.1\|1505214_1505754_-\|DivIVA-domain-containing-protein	gnl\|CDD\|377456	pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1 mutation causes misplacement of the septum during cell division, resulting in the formation of small, circular, anucleate mini-cells. Inactivation of divIVA produces a mini-cell phenotype, whereas overproduction of DivIVA results in a filamentation phenotype. These proteins appear to contain coiled-coils.	6.26293e-09
NC_013715.1\|WP_005506541.1\|1509557_1510739_-\|cell-division-protein-FtsZ	gnl\|CDD\|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NC_013715.1\|WP_012903787.1\|1491491_1492832_-\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	0
NC_013715.1\|WP_044150581.1\|1483981_1485355_-\|hypothetical-protein	gnl\|CDD\|378339	pfam09985, Glucodextran_C, C-terminal binding-module, SLH-like, of glucodextranase. Glucodextran_C is the C-terminal domain of glucodextranase-like proteins found in various prokaryotic membrane-anchored proteins. It shows homology to the carbohydrate-binding unit of some glycosidases.	0.00343477
NC_013715.1\|WP_012903798.1\|1503090_1504077_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.68085e-104
NC_013715.1\|WP_012903783.1\|1479082_1483597_+\|ATP-dependent-RNA-helicase-HrpA	gnl\|CDD\|273900	TIGR01967, ATP-dependent_RNA_helicase_HrpA, RNA helicase HrpA. This model represents HrpA, one of two related but uncharacterized DEAH-box ATP-dependent helicases in many Proteobacteria and a few high-GC Gram-positive bacteria. HrpA is about 1300 amino acids long, while its paralog HrpB, also uncharacterized, is about 800 amino acids long. Related characterized eukarotic proteins are RNA helicases associated with pre-mRNA processing. The HrpA/B homolog from Borrelia is 500 amino acids shorter but appears to be derived from HrpA rather than HrpB. [Unknown function, Enzymes of unknown specificity].	0

>NC_013715.1|WP_012903792.1|1496769_1497681_+|type-I-methionyl-aminopeptidase
MSSTKTNTSHNLPAEPGRAPVGCLTPGRITPMRPVPSHIVRPEYVGKPTANEGNDSNMYTPEEVERVRAAGKIAAGAIVEASKICVPGTTTDEIDVLVHEYICDHGAYPSTVDYRGYPKSVCTSLNEVICHGIPDSTVLEDGDILNLDVTAYLDGMHGDTNKTLLIGNVDEESRLLVERTEESLNRAIKAVKPGRQINVIGRVIEKYAARFGYGVVRDYTGHGVGREFHSGLIIPHYDAAPAYDTEIREGMIFTIEPMLTLGTIEWDLWDDDWTVVTRDRKRTAQFEHTLVVTADGADILTLP
>NC_013715.1|WP_012903791.1|1496252_1496510_-|hypothetical-protein
MSEKKSHLSEAIESAVEKTLNSAADATSPHADEYWYNLATGEVERGQQSAVTSLWGPFKTYEEAAHAMDRARERNEAWEKDGGLL
>NC_013715.1|WP_044150584.1|1495182_1496097_+|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MTTERSSEISSPYAAQPAATSAAAPATTSESKPFDLDTVKKVRTVHLAQAKATGQKFSMLTCYDALTAQIFDRAGIDMLLVGDSAANVVLGYESTLTITLDEMIPLVAAVSRGASRAMVVADLPFGSYEQSPQQAVASAVRLMKEGGAHAVKIEADASMAEWVRALVRTGIPVVAHVGFTPQSEHALGGFRVQGRGDASERVREDAVALAEAGAFCVLMEMVTAQTAQLVDEAVGTVPTIGIGASNVTTGQVLVWQDMMGVRSGRVPRFVKQFAQVGQVMEDAARAYREQVRSGEFPAAEHSFE
>NC_013715.1|WP_012903789.1|1493253_1495116_+|hypothetical-protein
MLHSVLPSTVQFPSEQFPLAQLPLATSIVAADPTGLEWLLLIAAPVVFCIVYLACIMAIAAFGPLVMRNSKSGGTTYLLDRPSRVAFRTRTVALFAVVGAFVELLWLGYTGRVGSMAVIPILLFTWSWKYTFFFLPLQLLRAWYVHASRGKYDALSAEGAQRREKLNRKSAYEVSKMMQRNPQQFAMSKELHTLARAQKIAGMRPFQNLDEAGKKRRTNYTVELAVALMQARAMNPGKLPSEAFGESILGMGVGIASDRAVEQTWLTLCTERVNAPDAPNYPDSLGPVAARFSLFTTMSLLHPVMGRPYSPFTAPDARRFVPRDFSADTVLLKTEELGKKALAQSAIFRQIHERLLPLHRQQPQLVDGRALAYCGALLVTVAKAEAESQRLTSQILAAAASERGILSFGVFSQISEDYQCVQRLLNLMVKATADIERFLNAVEALVQMHSGPVQPSGIAYEKVQMEYIAALLDVIVFSSHAPLAGSIQASYALLKADYEAFTFNTTDELSRSYWLQYAKNAVNACDTGLAQGYEGFFGADDAVKTADAARTAWESYAEDVVKEVCTYSIMQLYWDALVQQALIQRDLPREFSDASSAVPELMNKNAAASFPTYYINLIWN
>NC_013715.1|WP_012903787.1|1491491_1492832_-|type-I-glutamate--ammonia-ligase
MDRQQEFVLRTIEERDIRFIRLWFTDVVGTLKSVALAPAEVESAFDEGLGFDGSSIEGFSRIYESDMLLQPDPSTFQILPWRGEEDYTSRMFCDVLTPDGEISASDTRGVLKRVLNKAAEMGFTCYTSPEIEFYLLESSKLGADGFPVPVDYESYFDHTPGGIVQDFRRKAVTMLEEVGISVEFSHHETGPGQNEIDLRHADALQTADNVMTFRTVIKEVAYSLGMYATFMPKPFTKYAGSGMHTHFSLFEGDTNAFFEAGAEYQLSKTARHFIAGVLKHAPEFTAVTNQFINSYKRLWGGGEAPSYVSWGHNNRSALVRVPLYKPNKMQSARIEYRGLDSASNPYLAYAVILAAGLKGIENEYPLMPAVTEDLAAMTNAERRAMGYNPLPASLREAINITEESEFMAEVLGEQVFEQFLRNKRADWDQYQAQVTPYELKHNLGIL
>NC_013715.1|WP_172633356.1|1487928_1491273_-|bifunctional-[glutamine-synthetase]-adenylyltransferase/[glutamine-synthetase]-adenylyl-L-tyrosine-phosphorylase
MTDSSHYPATGLIRIIDPAKEPKPLTDIAPDALDDEQRAEAERKAQLRLRTRMIATGFHDPSKAERWLNAPELKHVSQDALFAGLRLAPSPDIALPALVRLIEKHPAVAERANRGEEEFGMYRLLGASQAIGDFLYRRPEHIDPLFDTQVYPAESALIRSQHPASILPETDGEFLTPIAPLDTPYRRDILTALGADPHAERPRAATGQTGKDGYVTLRVAYRAALARIALLDVCCEDPVEMMPTIGRHLADLAAAALEGALAIARTEVAEGLGPGLAAPRRGEAVDALDLAIIGMGKCGARELNYISDVDVVYVVAPVEPAATPNAGAEGESAPLKLTENECSTIGTELVHALTRAIMGPAPEPALWEVDANLRPEGKDGPLVRTVESYVQYYKRWAENWEFQALLKARPIAGSAQLGARYARAIDPFVWESAARESFVESVQAMRARVTDNIPSHQVDRQIKLGPGGLRDIEFTVQLLQLVHGRTDPAVRTKSTVDSLAALTAVSYISRTDAEAFSRDYKKLRVLEHRIQLQQLRRTHLMPEKDAEQRALARSILSPERNGTLSAEQMLKAWQKIKRNVRSLHERIFFRPLLAAVSTLSRDEVVLSEQAAQDRLAALGYRDPRGAMRHIKALTTGLSRSADIQRHLMPVLLGWFARGVDADAGLLGFRIVSESLGSTSWYLRMLRDSPAAAERLSQLLSSSRPMTDLLEDASASIAWLDKVADLKPLGEEALASEVSSLLARHADAAEAMRAVRYMRRRETLRTAMGWTLGIATIEDTCAGLAAIDECTIGAALQIALRELQAAPEGAEPAEAEETAGEKLLTRIAVIGMGRLGGAENGFGSDADVMFVHEPLDGADEDAAQEQAARIVNRTLALLKQPVKPAIRSERPLDVDADLRPEGKQGAIVRSLDSYRSYYERWAETWEFQALTRARPIAGDEELGEAFVELIDPYRYPANFAPEQVQQIRRMKARVENERMPHGADRTRQLKLGRGGLSDVEWLVQLVQLRHAHAVPGLRTTSTLKALNAAVEAGLVEAADAEILSGAWLLATKIRGGNVLRGVRQSDTLPSGRADLEAIARWCGYPAGSARALEEDYLRQTRNARKVYERLFFEEL
>NC_013715.1|WP_012903785.1|1485632_1486628_-|HNH-endonuclease
MKSSLKGFGIFFAVCLAFSLWYVILGVVIIIVIVGIVLTIRKNRYFTSPEFQTHRQRTATLASEYNEVASYVHDIYTHGIFELGTSTNGMYSHLATVEVQQPKTWQTLLRKKPEERHPHVYNSSKQVVLEAERDPIGSLTKYFHIEADLQTLKDVQRLSDDIARLETAVDNVRRREDDMLAHINPPQFITKQYAKEFWAKLNVCHVGLTVPYPVYRFEYASPGGKENRAVTVTLDTPTLDALSETLERKIRWAWPEGGKRTLMTAQLRQRIKERDNYTCQNPGCGNSIMRERILILEVVHKIPLSEGGNNEPENLQTLCWRCVRGRNLRLA
>NC_013715.1|WP_044150581.1|1483981_1485355_-|hypothetical-protein
MSTSLTRRKLVAGAAWAAPVVAASATIPSYAASVAATNDCTLAAHPAYNISGTEEGTKTVQTFAVPDNVHKLHFELVGGAGGTNNRMTPAGSGAKVSGIVPVTPGSTVQIIAAAGGIGDGSLTPTAGGEGYGNGGSVPAYTIPATITAQVDAKYADPANPKSQVYAASGGGSSALLIDGVVVAVAGGGGGAGMTTSAVSYADPWYSNFNGQIDAGVAPLGSDASPQFDAAGSASAAAGSNGTPGYEVYNAERSKVLTYNSGFGGAAGIGGAGGAAGTLPASGPIIGFETTNNQVLFSQFVAGNAGTSGFAGNGGDGAGAYSYQLDENPASVHEKGTYEDRSWDLDIYNDEGAYAQNFNGYQSVVSGGGGAGYGGGGSGAAQSVSSIVLTQKWLNSPTATGVRQGLGYTMQGGAGGAGGSYIAPSVSEGAIVSAENAPQWMRERGNGSVTVTFCEAAA
>NC_013715.1|WP_012903783.1|1479082_1483597_+|ATP-dependent-RNA-helicase-HrpA
MSEQKSTKKHADTSKAPRTAPTMASMAAAIHAAKVRSSEKAAGKTADKTTENYAVKNDAPKKGAQKNNADRKSSSRGASERNSNASRSNRRGVANNRARKQGNQQGGTNGNRQGEQQNRPASRRYEPFIPEVITYPEELPVSERRDDIMNAIRDNQVVIIAGETGSGKTTQIPKMCLDLGLGEKGLIGHTQPRRLAARSVAERIAEELGQKIGETVGYQVRFTSEVGEHSAIKLMTDGILLAEIQNDKLLRRYSTLIIDEAHERSLNIDFILGYLKRILPQRPDLKVIITSATIDPERFARHFSPSYVPGKGIVDENLSAEEREIAEAILPDDAPPIIEVSGRTYPVEIRYRPLDEEDYLSDDEIEDDHDPTDGILDAIKELSKEAPGDILIFFSGEREIRDAKDAIEAMVLKSPRLNYEVLPLYARLSLAEQHRVFSPGSRPRIVLATNVAETSLTVPGIKYVIDTGTARISRYSARTKVQRLPIERISQASANQRSGRCGRVSDGIAIRLYSEEDFNSRPEFTDPEILRTNLAAVILQMIAIGVVREPGDISRFPFVQPPASRAINDGVNLLRELGALTERPRSPRKGRGNSATLTAIGRAMAAFPVDPRLARMIIEGGRRNCAKEMMVLAAALTIQDPRERPADVRAEADAMHVRFVDDTSDFSSFLLLWDYINEQQAALSSSQLRKMCHREYINYLRIREWQDLFAQLREMGRTANIHASGGRDINASAHEIDIHKSLLSGLLSHVGVKEEREKDSKGRTRGPREYLGARGTKFAIFPGSGLFKKSPDWVLSAELVETSRLWARTNASIDPQWIEEIGKHLISVQYSEPHWSLSSGAAVAYAKGTLFGLTIYADRPVQYARVDAAAARELFIQSALVEGQWHTQHKFYLRNQRALAEVEELEARLRRRDLRVDDSVLFAFYDARIPAHVTDVRAFDKWWKQARLEDDNFLDFNPEKLINEEAADYDDSQFPRQWVQRTDSGELTLDLRYEYAPTAGVGGARTDAAKRDGVAVQVPILFLNQLSPEPFRWQIPGLRHELVTALIKSLPKAIRRNFVPAPDVARAACAALEEDYSPATDELLPSLALVLRRLRGVVVEPEAFNWDAVPEHLKMGFQVRNARNKILGEGKDLRALQQQLHKEIRSALADSLGASDEAMAKMVALAQGGSGNSGGSGNSGGSARPGSAKGAKNPAKGTQAEAGASGGVREVTGLTAFPADLFPNGEIPRKVQRVIATQAVNGYPALVDEGSSVGLRIFPTEAEQLHAQRRGIIRLLQLQVPSPVRYVSEHLSHKEKIVFTQNPHGSIDELIRDCTVAALDHLVPHTPIFTHAAYSELYEHVRAELIETVFDVTKLVAEILSEATALKKAIKKATSLTTMHAVSDVKAQMENLVYPGFVAQTGYDQLVHLPRYLKAAQVRLTKLGPNLHRDNQLMLTVQDLEDSYDNAVKSLPAGTIVPDALRRVNWMIEELRVSFFAQELGTAYTVSEKRIAKAQREALDAIKR
>NC_013715.1|WP_044150579.1|1478335_1478797_-|helix-turn-helix-domain-containing-protein
MPSPKTYPATRVAVLDCYEDGQHEEIHHRCEELFQALVHASLRTHFDRLSAEETLYLVTGDGERVQISPEMYGPLTSVARAFADRKDVCVVRQDRLMTTQEAADYLGVSRPTVVRLLERGDIPFERINTHRRVAFDDLERYRLEHEYVNRRVR
>NC_013715.1|WP_005506525.1|1498830_1499286_-|transcriptional-repressor-NrdR
MYCPYCKHTDSRVVDSRTTDDGAAIRRRRQCTSCARRFTTVETTTISVIKRSGVTEPFDRSKIAAGVRKACQGRPVGEDDLAKLAQEVEELIRARGLAEINAHEVGLTILEPLSKLDAVAYLRFASVYQAFENLEDFEEAIARLREDRIAQ
>NC_013715.1|WP_012903797.1|1499461_1503004_-|DNA-polymerase-III-subunit-alpha
MATKEFTHLHVHTEYSMLDGAARLGDLFTYAKELGMKSMATSDHGFLFGAFDFWRQAKAHDIKPIIGVEAYLTPGTHRTDRSRVRWGDGSRDDVSGGGAYTHMTMWAETTEGMHNLFRASSIASLEGQLYKPRMDREVLQTYSKGLIATTGCPSGEVQTRLRLGQFDEAVQAASEFRDIFGKDNFYCEVMDHGLDIERNVQEDLHRLAKKLNLPFVATNDLHYTRQEDHTAHAALLCVQSGSTLTDPKRFKFDADNFYLRSAEEMYALFGDIPGACENTLEIAERCNVEFNTKANYMPNFPVPEGENEESWFVKEVEKGLHYRFPDGVPDKVRKQAEYEVGVITSMGFPGYFLVVADFINWAKRNGIRVGPGRGSGAGSMVAYAMRITDLNPLDHDLIFERFLNPDRVSMPDFDVDFDDRRRGEVIDYVTEKYGEEKVAQIVTFGTIKAKQALKDASRVMDQPYSVGERLTKAMPPDVMGKNIALANVYNEEDKRYAEAADLRALIDDPVDKIYGQVFETAKGLEGLKRQWGVHAAGVIMSSKDLVDVIPVMRREADGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDAVENIKANRGIDLDLESLPLDDPESYRLLARGDTLGVFQLDGGPMRSLLKLMEPEEFEHISAVLALYRPGPMGANSHTNYALRKNGKQEIEPIHPELEEPLKDILDTTYGLIVYQEQVMAIAQKVANYTLGEADLLRRAMGKKKKAELDKQYATFHDGMISNGYSEGAIKALWDILLPFSDYAFNKAHTAAYGLVSYWTAYLKAHYPQEYMAALLTSVGDNKDKLALYLNECRAMGITVLAPDVNESTLTFAPVGDDIRFGMGAIRNVGANVVEGMIAAREEKGRYESFNDFLKKVPLQVCNKRTIESLIKAGAFDDLGHTRRSLSLIHEAAVDAAVAVKRKEAAGQFDLFGSLGMDDALGDELTVTIPDVPEWDRREKLNFERDMLGLYVSDHPLRGLERALSDAASHSVHDIIGEDSHVRDGETVTIAGMLTGVSRRIAKSSGNQYASVELEDPSGATITVMFFSRAYETMGAALADDLICSIRGRVQRRDDGSVNMSAQELQILEISDDGRAAPITIVVPEYLVTEANLKELKETLRDHKGTADVRMLVRTRDKEQLVLLDPSVRVEPNPSLFGEIKTIFGPSCIRR
>NC_013715.1|WP_012903798.1|1503090_1504077_-|RluA-family-pseudouridine-synthase
MSETTNAAEESARIRAEFTVEGALAGMRLDAALAGALDAPRTRTSGWILDGHVTVTNNGKAVKIGKSYKLSAGDEVVVDASAPRDLADIRPEKVDGFRIVHLDEDIVVVDKPAGVAAHPSPGWHGPTVISALMGEGISVATSGAAERQGIVHRLDVGTSGLMVVARSERAYTELKRAFKERTVDKVYHTLVQGLPDPLRGTIDAPIGRHPGNEWKFAVVEDGRNSITHYDVLEAFGPASLVEVHLETGRTHQIRVHFSALRHPCCGDLTYGADPRFSAELGLTRQWLHAHRLGFDHPGTGERVTFTSEYPLDLSYALTALREGKVQLS
>NC_013715.1|WP_012903800.1|1504214_1504892_-|signal-peptidase-II
MTNTPKTAESSVAQASDNAAENTTEEATGRRVRILSARSAGILALVLAAVVFAIDQGTKYLVVTQMQLGERITVIDGLLWWYSIRNSGAAFSMGENVTWVFTLVMVAAAAVVFYLLRRTRALSWTLALGGLLGGICGNLFDRLFREPGFGSGHVVDFISVPNFAIFNIADSAICVCMAFIVLLNFKGLNLNGTRAQAPADETSADEAPAGDKNAVEKNTAAKGAK
>NC_013715.1|WP_012903801.1|1505214_1505754_-|DivIVA-domain-containing-protein
MAITPEDLITKSFKIVTEESGYDRNEVDDFLDELVVELRALYSERDALERQVEQLSANAPDSPAAAVAPAQSSAASAAPQDAAALLAMAQKVHDDYVAQGEKAKAELIEEAEKKADAMVSEAQQQREEILSRLTDEKEELEIAVEALRGFESRYRSKLLQHLDAQVQELKNLKSIEASA
>NC_013715.1|WP_005506537.1|1506258_1506558_-|YggT-family-protein
MGYIFALITIVVYVLYIAMLLRMLFDWVRMFAPEWRPKGVVLLFASGVYAVTDWPMNQLRRLIPPVRVGNVALDTGFLILIVLLSLLLSIMMRMTAAFS
>NC_013715.1|WP_012903803.1|1506568_1507450_-|cell-division-protein-SepF
MAKQSRLAGFLGLERYQGAETTPEESPQAVQADSRREANASAGQAATAQKTESSHRLSALPGSAQYSVAESQSETYHLQDEPAYTEQEEYLQADSYDDGTETEYLDAEESADGRATVDAAAYATAHTPETTADLAETEQTWDDASADNWEDTPVPNTEYTEQYAETYSNDGYYDQGYEPEETNGYTYGYEEEEDELRRITTIHPRSYNDAKIIGEAFRENIPVIMNVEEMPDADAKRLVDFASGLAFALEGRIERVTAKVFLLTPSNLEVLGVANSDVPAGFETDGEFPFDQG
>NC_013715.1|WP_012903804.1|1507669_1508506_-|YggS-family-pyridoxal-phosphate-dependent-enzyme
MPEMNTEENHLQYTPERAEQLLQNYRRVLERIRAAEQDHSAVRTEVSAPVQLVTVTKFFPASDAAALLDGGVTLFGENRDQEASAKARELAAYCAQREVQPPHWAFIGQLQTNKAKSVVKYASSVHSVDRPSLADALAKAYANQLSRFEAGEAPAPAAAEHGALTCLVQVSLAEVATAGHAAEGARGGTSASELLELVERIENHEHLRCGGVMAVAPLGMNPDEAFEKLYGLASLVREQVPHATEISAGMSGDLEAAVRWGSTCVRVGSDIMGKRPAL
>NC_013715.1|WP_012903807.1|1508558_1509407_-|laccase-domain-containing-protein
MSETPKTPLLASADTRTLGPWRVRVGFTSRAAGNLGLHVDDELGGGMDASLVRTLNHRAALEEALGTEPFFYLNQVHGVQIAYPEDYEVESYAPGAPQERTVERARAVLENSPVADAAISSEGVPLAIMVADCIPVVLVGERVANWQPILAVAHAGRRGLLDGVLQQTVQRMRQLGAEKITAWLGPSICGSCYEVPEAMRTESTELIPQVHSVTSQQTPGLDLPAGARAVLEEAGVQVSMDCAQCTFEEPEVYSHRGFTNRGEKPGRIAGLVWLEKTAEPAA
>NC_013715.1|WP_005506541.1|1509557_1510739_-|cell-division-protein-FtsZ
MDAGTPQNYLAVIKVVGIGGGGVNAVNRMIEVGLRGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGANPEVGRQAAEDHAQEIEEVLKGADMVFVTAGEGGGTGTGGAPVVARIARSLGALTIGVVTRPFTFEGRRRSNQAETGIAALRDEVDTLIVIPNDRLLSISDRNVSMLDAFKSADQVLLSGVQGITDLITTPGLINLDFADVKSVMQGAGSALMGIGSASGEDRAVKAAELAIASPLLEASIDGAHGVLLSIQGGSDLGLFEINEAARLVQEVAHPDANIIFGAVIDDALGDEARVTVIAAGFDAVNPETNSNASTAAATQAQRTQASFGGSTAPAANGYGYNAPAAAPASTGAAGFDVDLPPVVEEAPARRDTLDVPDFLK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_013715_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_013715_10

2232657-2232775

Orphan

Consensus_repeat	Method
ACTGGTAACCAGAACCAGCAGCGTTCTACCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_013715_10

>merge|NC_013715|10|2232657-2232775|CRISPRCasFinder
ACTGGTAACCAGAACCAGCAGCGTTCTACCGCGGCTAACCAGCAGGCTACTCAGCCTGCGGCGGCGACCGGTAACCAGAACGCTACCACTGGTAACCAGAACCAGCAGCGTTCTACCGC

>NC_013715|10|10|2232657-2232775|CRISPRCasFinder
ACTGGTAACCAGAACCAGCAGCGTTCTACCGC	GGCTAACCAGCAGGCTACTCAGCCTGCGGCGGCGACCGGTAACCAGAACGCTACC
ACTGGTAACCAGAACCAGCAGCGTTCTACCGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_013715.1\|WP_044150898.1\|2233932_2234682_-\|class-E-sortase	unknown	unknown	gnl\|CDD\|320679
NC_013715.1\|WP_012904368.1\|2237136_2238567_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_044150901.1\|2245435_2246635_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340817
NC_013715.1\|WP_005507381.1\|2226036_2227497_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NC_013715.1\|WP_012904364.1\|2233103_2233736_-\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|181107
NC_013715.1\|WP_005507386.1\|2233751_2233913_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_012904358.1\|2223809_2224274_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224630
NC_013715.1\|WP_012904369.1\|2238614_2239163_-\|hypothetical-protein	unknown	unknown	unknown
NC_013715.1\|WP_005504033.1\|2243974_2245330_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NC_013715.1\|WP_044150893.1\|2222183_2222471_+\|PLDc-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379161
NC_013715.1\|WP_012904366.1\|2235355_2236273_-\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NC_013715.1\|WP_044150899.1\|2236481_2237114_+\|LysE-family-transporter	unknown	unknown	gnl\|CDD\|224198
NC_013715.1\|WP_012904357.1\|2222928_2223810_+\|DUF3662-and-FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|378850
NC_013715.1\|WP_012904359.1\|2224277_2226044_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
NC_013715.1\|WP_012904362.1\|2228925_2230683_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_013715.1\|WP_044150886.1\|2215346_2216699_+\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|184855
NC_013715.1\|WP_005507388.1\|2234841_2235156_+\|cell-division-protein-CrgA	unknown	unknown	gnl\|CDD\|377706
NC_013715.1\|WP_044150895.1\|2227489_2228929_+\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|274573
NC_013715.1\|WP_044150889.1\|2216843_2220101_+\|bifunctional-lysylphosphatidylglycerol-synthetase/lysine--tRNA-ligase-LysX	unknown	unknown	gnl\|CDD\|235095
NC_013715.1\|WP_044150891.1\|2220437_2222000_+\|alanine:cation-symporter-family-protein	unknown	unknown	gnl\|CDD\|376500

Protein	Function_ID	Function_description	E-value
NC_013715.1\|WP_044150898.1\|2233932_2234682_-\|class-E-sortase	gnl\|CDD\|320679	cd05830, Sortase_E, Sortase domain found in the class E family of sortases. Class E sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Actinobacteria). Genes encoding class A and E sortases are never found in the same organism, and similar to class A sortases, the genes encoding class E sortases are not positioned adjacent to genes encoding potential protein substrates, suggesting a housekeeping sortase function of class E sortases in some high G + C Gram-positive bacteria. Similar to class A sortase, class E sortases are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They recognize an LAXTG sorting signal, instead of the canonical LPXTG motif processed by class A sortases. The prototypical class E sortase from Corynebacterium diphtheria (named Cd-SrtF) is a non-polymerization sortase that is not required for pilus polymerization, and proceeds to complete the assembly process by anchoring the polymer to the cell wall peptidoglycan. Moreover, in Streptomyces coelicolor, one or both of Staphylococcus aureus SrtA homologs may function as class E sortase responsible for the cell wall anchoring of the long chaplin proteins (ChpA-C) containing an LAXTG sorting signal, which presumably mediate aerial hyphae formation. The family also includes some class E sortase homologs from Gram-negative and Archaebacterial species, but the functions of these enzymes are unknown.	1.97388e-65
NC_013715.1\|WP_005507381.1\|2226036_2227497_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	3.12095e-79
NC_013715.1\|WP_012904364.1\|2233103_2233736_-\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|181107	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II.	1.68833e-110
NC_013715.1\|WP_005507388.1\|2234841_2235156_+\|cell-division-protein-CrgA	gnl\|CDD\|377706	pfam06781, CrgA, Cell division protein CrgA. CrgA is a trans-membrane (TM) protein, first described in Streptomyces as being required for sporulation through the coordination of several aspects of reproductive growth. In Mtb (Mycobacterium tuberculosis ) CrgA is a central component of the divisome, and consists of 93 residues with two predicted TM helices (TM1: residues 29-51; and TM2: residues 66-88). CrgA facilitates the recruitment of the proteins essential for peptidoglycan synthesis to the divisome and also stabilizes the divisome. Reduced production of CrgA results in elongated cells and reduced growth rate, and loss of CrgA impairs peptidoglycan synthesis. CrgA has homologs in other actinomycetes.	2.08188e-18
NC_013715.1\|WP_012904358.1\|2223809_2224274_+\|FHA-domain-containing-protein	gnl\|CDD\|224630	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms].	5.2968e-19
NC_013715.1\|WP_005504033.1\|2243974_2245330_-\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_013715.1\|WP_044150901.1\|2245435_2246635_-\|glycosyltransferase	gnl\|CDD\|340817	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins. This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.	7.0677e-29
NC_013715.1\|WP_044150893.1\|2222183_2222471_+\|PLDc-N-terminal-domain-containing-protein	gnl\|CDD\|379161	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal. This family is often found at the very N-terminus of proteins from the phospholipase_D-nuclease family, PLDc, pfam00614. However, a large number of members are full-length within this family.	0.000576266
NC_013715.1\|WP_012904366.1\|2235355_2236273_-\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	7.47132e-113
NC_013715.1\|WP_044150899.1\|2236481_2237114_+\|LysE-family-transporter	gnl\|CDD\|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	1.1208e-51
NC_013715.1\|WP_012904357.1\|2222928_2223810_+\|DUF3662-and-FHA-domain-containing-protein	gnl\|CDD\|378850	pfam12401, DUF3662, Protein of unknown function (DUF2662). This domain family is found in bacteria, and is approximately 120 amino acids in length. The family is found in association with pfam00498.	7.50152e-33
NC_013715.1\|WP_012904359.1\|2224277_2226044_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.73029e-59
NC_013715.1\|WP_012904362.1\|2228925_2230683_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.82349e-118
NC_013715.1\|WP_044150886.1\|2215346_2216699_+\|Na+/H+-antiporter-NhaA	gnl\|CDD\|184855	PRK14853, nhaA, pH-dependent sodium/proton antiporter; Provisional.	0
NC_013715.1\|WP_044150895.1\|2227489_2228929_+\|penicillin-binding-protein-2	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	4.85861e-94
NC_013715.1\|WP_044150889.1\|2216843_2220101_+\|bifunctional-lysylphosphatidylglycerol-synthetase/lysine--tRNA-ligase-LysX	gnl\|CDD\|235095	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX.	0
NC_013715.1\|WP_044150891.1\|2220437_2222000_+\|alanine:cation-symporter-family-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	0

>NC_013715.1|WP_012904362.1|2228925_2230683_+|serine/threonine-protein-kinase
MRPAADITLGGRYTLTERIAIGGMGEVWKARDKVLGRIVAVKILKEEYTGDPGFLERFRAEARNTALLNHPGVANVFDYGEEDNSAYLVMELVPGNPLSSIIEHETTLPPDRILNFIAQTARALAAAHSQGLVHRDVKPGNLIITPDDRVKVTDFGIARLANQVPLTATGQVMGTAQYLAPEQATGQAATASSDMYSLGIIGYECLVGRRPFTGESQIAIALAQVNDPPPPLPETIPAPARALIMCLLAKDPAQRPKDATALASAVDAIRRRDLKAAVKAVPSLAQFLAEENADDATVAMTAMDVAAEPISASATPRFGSGGRFSPAPTTAPIPRTSEQTMRPVSGRVKSTPAPAAKRGPNVWMWVALLLAIVLIAGGIWTVLSSNNGGGSTDPVPSASSSAVPTNTGTVSTVEPTESASARAAKQKVTVNAINYEGRELQDAVNELKNLGLSPKTEGVESTQPENTVISVSPTGTLEQGNSVTVRYSTGPKSVTLPSNLEGKNVDEASKAVAALGVNVSLHYENSDTAAPGTVLRTTPSSGTKVTVGSNVDMYVASSSSGRGSSASASAAPSASASASASASAR
>NC_013715.1|WP_044150895.1|2227489_2228929_+|penicillin-binding-protein-2
MDRAIRRMWMSAACVFVLLMGTLSYIQFFDSKTLMNNQWNSRALYDNYGSARGSIVVDGTEIASSVKSDDEYNYQRVYNHPLKYAALTGYFSTIYGATGLEAAMDKELAGTSDSQFYDRVAQLFSGSSAQGASVELTINSKLQDIAYNALQGRKGAVVAMNPKTGEILAMASSPSYDPNLLSSHTSSSVLANYQALTSDEDSPLFNRAIAGNTYSPGSTFKIIDAVAALESGKYNASSVIANPAQLPLPGTNISLPNYTGGQCSTRTQATIEWALAQSCNTPFAQIAMDLGQERIAKTAENFGYGQDLKIPLTVSKSSFPSNLTQSQLAQSAIGQYDVKTTPLQVAMTSAAIANGGVQMKPNLIRSVKTSNLSTLQEFSPEKLRTSTSPEIANQVKQWMVNAVDNGIARNAGVSGVKVAGKTGTAETTAGLNNSWFTGFAPADDPQIAIAVVYEDIDVATGAQLATSTSKQLFEAVLNK
>NC_013715.1|WP_005507381.1|2226036_2227497_+|FtsW/RodA/SpoVE-family-cell-cycle-protein
MAKFSFRRESDAPRARRFTELFLLVLAVGISSFGMYLIDPEHAFDTSKSQWLPCTVVLGAGALLIHLVMQFRARYADPFILPLVVALNGIGLTMIYRLDPQIAAPVGDGQLMWTGVSMVLCAIIVFVLRDYRLLRKVTYTSLVLSMILLIMPLVPGLGMELNGARIWIHIGNRTFQPGEVAKITLAIFFAGYLATHRDLILVAGRRIGPINLPRLRDLAPVFLAWIVSLGVLVFQKDLGSAIMFFGLFMAMLYLSTGRISWLVVAGIGMAVGGYFAYHYVSHVHARIYAWVHAFDPEIYQASPGGSGQILQGVFGLAYGGLFGRGWGQGRANLVPYANSDMIISSLGEELGLVGLGAILMMFMLLVSRGYRAALGTRDGFGKLLAAGLSTVMVLQLFVVIGGVTRLIPLTGLTTPFMSAGGSSLVANWIIVALWLSISHSARAPHLVAGYDAPQGIDHADTSYEPEGATSVLARITAKDSGGEKNG
>NC_013715.1|WP_012904359.1|2224277_2226044_+|serine/threonine-protein-phosphatase
MKIAFRFEARSDTGLKRSKNDDSGYGGRFLAVVADGMGGHVGGDVASATTVLNLTPLDHPDFEDGTGSVYLADEIQSANLIINELAANDPQLAGMGTTCTALLIDGDCIEFAHIGDSRAYRLRPGADGEFEQISTDHTFVQRLLNEGRITPQEAENHPHKNVIMRVLGDVDASPELELKTLDAVPGERWVLSSDGLDAVVSLAEIEQVMRSTDDLSEIADTLVAMTLERGAPDNVTVVSLQVIDREVLPVDEPVGPSSLPESALPDSIVAEQEVSTNTQKLPEVAATAEAAEAFLGAHHDEDSEEHHRRSLRRFRRARDFSGTLLHSGSGAVRHHIGTYDNAVDAALTNAAILRSELGSRPHQLVGAASVATETGMIPAVTSRTLEHRATVAQRVPLKVESDEAALPAELEELIAEDTEERSRPRSWPIRLFITLLVAAVLTLAAWTGLRYVERSYYVGESDGTVAVYNGIPHALGPIRLSHVVENTDIPTSELSDHTRSLLRNAITAKDLDDAHQIVSRLKTQADQTREKAEQAAASASASASASPSSAAPSEALSSGAPGSDSTSPAPELATVSSAPAAEGGENNG
>NC_013715.1|WP_012904358.1|2223809_2224274_+|FHA-domain-containing-protein
MASELTVTILRYAFLALIWFFVFLVVSAARRDLGLGKNYRAAPVDAVPEATHIAPPPARPSQLVITAGAQAGAMMQLGDHPITIGRANDIEVSLQDDYASGRHARLFPQGSRWFLEDLNSTNGTFVNGERLTRATPIEPGDDFRVGGTTMQLRG
>NC_013715.1|WP_012904357.1|2222928_2223810_+|DUF3662-and-FHA-domain-containing-protein
MKFFDKLGKLEQGIGRTVGLSKGFGTFAKADVANRVRIMMDDESYVDGSGRTMAPNVYTLRFAPVDFPRVREWGNPFAVELCDLAISHARAQGYTLIGAVRVTFNVLDSLSEGEFEVVATFEPFSVPEAPASPSLRGATNYAPVRPPRESSLPTRITKPAAQPAQPAHPAQPAQPAQPQAPVGRPSMPVAPPATAAPRFFLEIEGRMHPVDRLPFVLGRGSDADLRLDDKGVSRRHLQLSMQGGAVVASDMGSTNGTLINGVPLRAPVMLANGSLLRMGNTRIIFHSSTGGAR
>NC_013715.1|WP_044150893.1|2222183_2222471_+|PLDc-N-terminal-domain-containing-protein
MDWHAVLELVVTVVFLAGIALALLCLVTIHRNPHFSEVQKLKWLLLVLCLPYVGPVTWLLRARLERIDRERTEQERGAQASAAASDTATSEEGGW
>NC_013715.1|WP_044150891.1|2220437_2222000_+|alanine:cation-symporter-family-protein
MDFLLNIIGDINTHTAGLTSTVDAVQNWMWSNFLYYALIAAGLYITIRTRGVQWRSIKEMVRVLGDPVAREADGKKSISSFRAFTVSAASRVGTGTVAGVALAIAMGGPGAVFWMWVIAAVGAASAFAESLLGQLYKERGKDSYIGGPAYYMKRGLNARWMGYIFVAFIVITYAFVFVAVQTNAVVDAAANSFNIDVSGTNSMGFRITIGLIMVALTAAIIFGGIRAISSVTEWLVPIMAVLYLLLGLLVVLLNITEVPNMLLMIFQGAFGIKEFVTGGTMGAVIWGMKRGLLTNEAGMGTAPNAGATATISHPAKQGYVQTLGVYFDTMMACTVTAFIVLLSNPTYGDRSRGASLTQSALAMQLGDWAVHFLTIAIFMFAFSTVIGNYYYGESNMRFVTERKLPMTIFRVLVLAFVFFGAISSLDLVWTTADMLNAGMVIVNLTAVLLLTPKVVAVLKNYEAQRKAGLEPIFKASDMPEIKNLAAWDGTDAVTTREFWAEYDAKTAERRAAKKAKKASR
>NC_013715.1|WP_044150889.1|2216843_2220101_+|bifunctional-lysylphosphatidylglycerol-synthetase/lysine--tRNA-ligase-LysX
MVIGVYSFAALLTTFAWIISPLRRGRGFTWWEVTADLLNIPSTHTLPSAITMIVLVSGLIVRKRAALIAAIVFQVLGALIATHSAFTLVFPAGIMPKDRIFSSTVDTLSIVFACALVPFLFSIRSAFPARIGRLSWAGAAATAAGGILLTTLVLWYLCHIGVWEPLRFITPWELLMHGMGIERTHPGVWAADVVAFLASFGYGASLVAALYLLARGYRAPDAWTGEKELKIRALLQQYGANDSLSYFSTRRDKQVIFSPDQRAAITYRSVGSVCLASSDPVGDPDSWDAAIEQWMLQARSYGWVPAALSVSEAGARAYNRAGLSIIQMGEEAVLEADRFTLNDTSMLPVRQAVQRVRRGGYTVQIRRFSELNEQQRQQVAENISAWRHGRVERGFSMALNRVNDPADSSSLLVSTHDEAGRMVALLSFVPWGPTGLSLDVMRRSPDAPNGVVEFMVASLMEQAASLGVRRVSLNFAMFGHIFEAADQVGASAWNRFASRSLGVLDRFLQLRRLYRFNLKFAPLWVPRFLATEPTLAMVNVVFAAGMAEGFLPNLSARRLQDQEQVLSAGELEALRQMQLATVEELPEVSRSDQTQHRLRHLEALRAAGMEPYPLGGEKGGTGVSVLGVEDALRIFSSENIPDSEFIVSGRVRALRKHSGVLFITLVEGTKTLQVVMERSLVGERLLNLAAHALDTGDIITVQGTYGASRNGTESLIASTWHMASKSLHPIPFDSFTDPEARLRRRSTDLLVHPDQMQNLRLRTAVIKALRARLDTEGFLEVETPILHTVHGGASARPFRTYINAYGEDLTLRIAPELYLKRLVVGGSGPVYELGRDFRNEGADATHNPEFTVLEAYRPYADYVQMRELTECLLKDAARAVFGSVSLPLGHKASSERVVTDVSAPWRVVSVCDALSEALGRRVDVQTDFEELLALAQQHGVRVHEGMGPGAIVEELYGELVEAHTVEPTFYTDFPAETSPLAAPHRSVPGLAERWDLVINGMEMGCAYSELADPLVQRERLTEQSLKAASGDLEAMEVDEDFLYALETGMPPTGGLGLGVDRLVMLLAQTQIRGVLSFPFVKPERS
>NC_013715.1|WP_044150886.1|2215346_2216699_+|Na+/H+-antiporter-NhaA
MTHTNPDTLSRGSYSNSRRVADILRAETVGGTVLLIATVLAVVLANTPASTFYFGLRDTVVGPVIPGFNHLQMSIGTWAADGLLVVFFFLTGLELKKEFVIGDLKSPSTAIVPIAAAFGGVAVPAIIYTALNFTSPTALHGWAIPTATDIAFAVSVLAAVGTFLPSAMRVFLLTLAVVDDLIAICIIAIFYTNNFHGEYLLFALIPLALFAFIAYRGETMLHLKPLAAWVLLLPLGIITWALFLESGIHATISGVVLGFLVPVKMSARSEAAQAEHGLAEVLEHRFRPLSTGICVPIFAFFSAGVAVGGFEGLGRALTDSVAVGIMVALVAGKTIGIFGTTWLVTRFKNANLDPDIAWIDVVGLAATGGIGFTVSLLVAELSFPHGSPHTEDAKIAILVGSVLAAIVGAAILSRRNKHYRALAEKETVDADDNGIPDVFEGTYRDPKAEA
>NC_013715.1|WP_012904364.1|2233103_2233736_-|aminodeoxychorismate/anthranilate-synthase-component-II
MTRILVIDNYDSFVFTLVGYIQQLGAETTVIRNDEYELAEVIKLAEEHDGVLVSPGPGAPAEAGVIIDTIRWAAEAKKPLLGVCLGHQAIAEAFGGTVTHAPELMHGKTSRLVHENVSVFKDVPCPFTATRYHSLAVVPETMPEVLETTSTTDNGIIMGLRHREAPMHGVQFHPESVLTESGYLMLGNWLEETGLQGAAERAKSLSPLMA
>NC_013715.1|WP_005507386.1|2233751_2233913_-|hypothetical-protein
MYAWIFRHLPGPLWVRIIIAIVLILAVVYLLMEFVFPHFAEYGPFNLNVTINH
>NC_013715.1|WP_044150898.1|2233932_2234682_-|class-E-sortase
MSQGTAPTAERRPRTVLHWIIQITGELLITVGLLLLLFVAWQLWWTNIDADRTQSQAVSTLVQEFDSNPAEPLPDWDPNTPPAGLSEPGHGEVFGIVYIPKFGSDYQRPATQGTSSDVLDSLGLGHYEGSAMPGQVGNFSLAGHRQTRGKVLNDIDLLTEGDHIYVRTKDGYYTYTVYSHEIVQPDQVEVIEPVPGQPGVAPTERLLTLTTCHPRYGDTERYIVHARLESWRPAAAGAPAEIAASVAGS
>NC_013715.1|WP_005507388.1|2234841_2235156_+|cell-division-protein-CrgA
MSTNSAKASSKKKSQKSAKSEVEDASELRLREIAREMESGTQLKEQTPLWYRVIMFSLLAVGILWIIVFYITQGLFPIPDLGMWNVSVGVGAMMVSMLMMTRWR
>NC_013715.1|WP_012904366.1|2235355_2236273_-|LysR-family-transcriptional-regulator-ArgP
MTRFSTDQLTTFATVIEYGTFDAAADILRVSPSAISQRIKAMEQIAGKVLVRRSNPVTPTDAGQSVLRIARQSEFLQQEMERELMGAGGFQSVSVAVNADSLATWFLDAVGILSREDSIFCDLRREGEFHSSAMLRSGEVMAVITSKPEKIPGCSVETLGVARYWCVATPDFVQRYLPGWPKIMSREELNRAPVVEYDRKDFVQDVARALIEKEVGLEAEETFTQSPTIYIPSSPDYARAVSSGIAWGLIPEAQCAEELESGHLVKLAATPVEFPLYWQRWNINSPVMETVTRRVHEAARGDLIY
>NC_013715.1|WP_044150899.1|2236481_2237114_+|LysE-family-transporter
MSASLSLLFLGATTTISLVAAIGAQGTFVLRQGILGRHITPIIIFCILSDALMIGLGVVGLGALLDAAPWFIEVFRYVGAAFLAWFGYESAKRVFIPHAVVVEEGTEDAQSLKAALLTTAAVTYLNPLAWLDTTIFLGSLANTQGDPGRWWYYLGCCCGSVLWFLMIGYGSRILRPLFARPEAWRVLDAAVALLMVYLVFNLLTVNLSTH
>NC_013715.1|WP_012904368.1|2237136_2238567_-|hypothetical-protein
MSTQDQNTPQQKDARPIWARLRTKATAEEAQPHHYTRADMLKQSNIWFRKQGVPLIIPARQRALDAFPRSVPWILWAGIMHICYIFLRDILLFVVEDVKGSLPNYIKALTSDSALSNEVLPVLVLGGIFLVMPIISGAFIALAHMLMVRTPQWVQITTGILTLLFAGMLFTTGVFEASTLEGIDFVYDGGQVFPLIVIGIYLAIFLGVDTILGWSFKHAIHQLASLPPMIAKVLPVLMVSVLFIFVNADLWKLANGLSFPRTWAVLGLMGLLAVFVVVTTSLERTARLLGRNRGDDIARFSESDYEHAAALEGGIWNTAQDWVEEQKILEHRPLKIAPWSNLIIIPMIGQIIQATLFMLLVFGFFMGFSSIAISDTTIESWMSIKPEHLKILGVDTNINAVVIKVSMIVAVFSGLNFVATTSSDEKYARSFLKPMIERIKHILIIRDIYLGLLTMPKNEVLIPLEEERVQKEPDKA
>NC_013715.1|WP_012904369.1|2238614_2239163_-|hypothetical-protein
MHYPMFSHAPEPVDQQHQHNGEERTAALYVESTLEPHETWAALTEYIHLWWPRQLLQSEESHIDLSTELLLEETAAGDIIPVARIIQCENEDVLTIAPYPGTHLGRLLGVAEESEESLSFILDALAPETAEGPLSLLEISSGTYTGREDEELGIYAEQEAAAALLMGAYSRFIGTELQREEL
>NC_013715.1|WP_005504033.1|2243974_2245330_-|replicative-DNA-helicase
MSETAIDYGSRTMPHDDVAEQSVLGGMLLSKDAIADVVESLRASDFYKPAHETIYEAILSLYGHGSPADAITVADELKKRGELTRVGGASYIHTLIASVPTAANAQYYAEIVKEHAIMRRLIEAGTKIAQLGYANETEVDTLVDQAQAEIYAVTDGNAKEDYVSFSEALEETINEIDANSNRPDGVYGVPTDFIEFDELTGGLHGGQMIVIAARPGVGKSTLALDIARSAAIHHQMTTVFFSLEMSRTELAMRILSAEGKISMGRLKKGDLDTEGWTNLATLQGRIDSAPLFIDDSPNMTLMEIRAKCRRLKQRNDLKLVVLDYLQLMSSGKKVESRQQEVSEFSRSLKLLAKELDVPVIALSQLNRGSEQRTDKRPMVSDLRESGSIEQDADMVILLHREDMYNPDSERVGEADMIIAKHRGGPTRTIPLAFSGKYSRFNNMANEAPPQY
>NC_013715.1|WP_044150901.1|2245435_2246635_-|glycosyltransferase
MSRILFSPESFNMGETTRCIEIARVARERGHTVLFHVYSPKYLGLLESAGLPVHLREPIMSDAEAEQIMALDQGRGVRHPFTTDMVRRRVAAELEAIRDFSADAVVIGSNLTMLLSARIAGVPIFYARPYAYSSTYFSKKPVGGELAAPGWLRAVARVLSYKPASFTRVAREHGLRLPRRTVDMLSADVNLICSLFTQLRGDSLVEPDVSVGPIYYRAPGELPQIVLEPRERPLVYVGMGSSGSADILAQVLRQLSAAPVDVLVGGGVPLPDAETSLLGDNIHFAGTVPAHLLAGHIDASMTHGGEGTVQTACLAGVPFAGIAMQAEQSWNIEECVRYGNALRFTKNDVRRGNVRDILGRLLRDEGMRARARQLGEAMRTMDGAALAVEKIEDYLRAAH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_013715_6	6.23\|1376194\|38\|NC_013715\|PILER-CR	1376194-1376231	38	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	65924-65961	8	0.789
NC_013715_8	8.7\|1380660\|35\|NC_013715\|CRISPRCasFinder	1380660-1380694	35	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	122095-122129	8	0.771
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	KM389212	UNVERIFIED: Pseudomonas phage JBD88b clone contig00001 genomic sequence	30978-31013	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	MK511008	Pseudomonas phage CF124, partial genome	1677-1712	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	KM389324	UNVERIFIED: Pseudomonas phage F_ET2439sp/ET602 clone ctg7180000000166 genomic sequence	9055-9090	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	MK511013	Pseudomonas phage BR161, partial genome	14382-14417	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	MK511002	Pseudomonas phage CF57, partial genome	14281-14316	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	MK511012	Pseudomonas phage BR153, partial genome	27858-27893	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	MK511009	Pseudomonas phage CF136, partial genome	14237-14272	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	MK511003	Pseudomonas phage CF65, partial genome	14268-14303	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	KM389210	UNVERIFIED: Pseudomonas phage DO4 clone contig00001 genomic sequence	18118-18153	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	KM389463	UNVERIFIED: Pseudomonas phage JBD94b clone contig00001 genomic sequence	19113-19148	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	NC_016762	Pseudomonas phage phi297, complete genome	28837-28872	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	MK511005	Pseudomonas phage CF81, partial genome	14373-14408	8	0.778
NC_013715_8	8.24\|1381897\|36\|NC_013715\|CRISPRCasFinder	1381897-1381932	36	NC_030929	Pseudomonas phage JBD44, complete genome	12699-12734	8	0.778
NC_013715_7	7.8\|1379786\|36\|NC_013715\|CRISPRCasFinder	1379786-1379821	36	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	259082-259117	9	0.75
NC_013715_7	7.21\|1379786\|37\|NC_013715\|CRT	1379786-1379822	37	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	259081-259117	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	KM389212	UNVERIFIED: Pseudomonas phage JBD88b clone contig00001 genomic sequence	30978-31014	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	MK511008	Pseudomonas phage CF124, partial genome	1677-1713	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	KM389324	UNVERIFIED: Pseudomonas phage F_ET2439sp/ET602 clone ctg7180000000166 genomic sequence	9055-9091	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	MK511013	Pseudomonas phage BR161, partial genome	14382-14418	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	MK511002	Pseudomonas phage CF57, partial genome	14281-14317	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	MK511012	Pseudomonas phage BR153, partial genome	27858-27894	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	MK511009	Pseudomonas phage CF136, partial genome	14237-14273	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	MK511003	Pseudomonas phage CF65, partial genome	14268-14304	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	NC_016762	Pseudomonas phage phi297, complete genome	28837-28873	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	MK511005	Pseudomonas phage CF81, partial genome	14373-14409	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	NC_030929	Pseudomonas phage JBD44, complete genome	12699-12735	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	KM389210	UNVERIFIED: Pseudomonas phage DO4 clone contig00001 genomic sequence	18117-18153	9	0.757
NC_013715_8	8.67\|1381897\|37\|NC_013715\|PILER-CR	1381897-1381933	37	KM389463	UNVERIFIED: Pseudomonas phage JBD94b clone contig00001 genomic sequence	19112-19148	9	0.757
NC_013715_7	7.4\|1379491\|37\|NC_013715\|CRISPRCasFinder	1379491-1379527	37	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	337893-337929	11	0.703

1. spacer 6.23|1376194|38|NC_013715|PILER-CR matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 8, identity: 0.789

gcgggtcgacggcggcgatttcacgggcggacttattg	CRISPR spacer
tcgggtcgacggcggcgaattcgcgggcgcagccattc	Protospacer
 ***************** ***.****** * ..***

2. spacer 8.7|1380660|35|NC_013715|CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 8, identity: 0.771

ttggtgcg--ggtgtgctctccgcggcggccgtccca	CRISPR spacer
--ggcccggaggtgtgctcgccgcggcggccgcccag	Protospacer
  **. **  ********* ************.** .

3. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to KM389212 (UNVERIFIED: Pseudomonas phage JBD88b clone contig00001 genomic sequence) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

4. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to MK511008 (Pseudomonas phage CF124, partial genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

5. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to KM389324 (UNVERIFIED: Pseudomonas phage F_ET2439sp/ET602 clone ctg7180000000166 genomic sequence) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

6. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to MK511013 (Pseudomonas phage BR161, partial genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

7. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to MK511002 (Pseudomonas phage CF57, partial genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

8. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to MK511012 (Pseudomonas phage BR153, partial genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

9. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to MK511009 (Pseudomonas phage CF136, partial genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

10. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to MK511003 (Pseudomonas phage CF65, partial genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

11. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to KM389210 (UNVERIFIED: Pseudomonas phage DO4 clone contig00001 genomic sequence) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

12. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to KM389463 (UNVERIFIED: Pseudomonas phage JBD94b clone contig00001 genomic sequence) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

13. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to NC_016762 (Pseudomonas phage phi297, complete genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

14. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to MK511005 (Pseudomonas phage CF81, partial genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

15. spacer 8.24|1381897|36|NC_013715|CRISPRCasFinder matches to NC_030929 (Pseudomonas phage JBD44, complete genome) position: , mismatch: 8, identity: 0.778

accaacaccaccagcgccaacaaggagtctgctaac	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggac	Protospacer
********* ********* ******... ** .**

16. spacer 7.8|1379786|36|NC_013715|CRISPRCasFinder matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 9, identity: 0.75

tttcttgaagtcttgagccatgccgccgtggacgta	CRISPR spacer
gttattgaagtcgtgagccatgccgccggccagctg	Protospacer
 ** ******** ***************   *  *.

17. spacer 7.21|1379786|37|NC_013715|CRT matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 9, identity: 0.757

tttcttgaagtcttgagccatgccgccgtggacgtag	CRISPR spacer
gttattgaagtcgtgagccatgccgccggccagctgg	Protospacer
 ** ******** ***************   *  *.*

18. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to KM389212 (UNVERIFIED: Pseudomonas phage JBD88b clone contig00001 genomic sequence) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

19. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to MK511008 (Pseudomonas phage CF124, partial genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

20. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to KM389324 (UNVERIFIED: Pseudomonas phage F_ET2439sp/ET602 clone ctg7180000000166 genomic sequence) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

21. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to MK511013 (Pseudomonas phage BR161, partial genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

22. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to MK511002 (Pseudomonas phage CF57, partial genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

23. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to MK511012 (Pseudomonas phage BR153, partial genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

24. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to MK511009 (Pseudomonas phage CF136, partial genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

25. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to MK511003 (Pseudomonas phage CF65, partial genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

26. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to NC_016762 (Pseudomonas phage phi297, complete genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

27. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to MK511005 (Pseudomonas phage CF81, partial genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

28. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to NC_030929 (Pseudomonas phage JBD44, complete genome) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

29. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to KM389210 (UNVERIFIED: Pseudomonas phage DO4 clone contig00001 genomic sequence) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

30. spacer 8.67|1381897|37|NC_013715|PILER-CR matches to KM389463 (UNVERIFIED: Pseudomonas phage JBD94b clone contig00001 genomic sequence) position: , mismatch: 9, identity: 0.757

accaacaccaccagcgccaacaaggagtctgctaacc	CRISPR spacer
accaacacctccagcgccatcaaggaactggcggaca	Protospacer
********* ********* ******... ** .**

31. spacer 7.4|1379491|37|NC_013715|CRISPRCasFinder matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 11, identity: 0.703

tcgaagctatcggagccgtcgtagaagacacaatcaa	CRISPR spacer
gccatgctatcaaagccgtcgtagaagacacgtctgg	Protospacer
 * * ******..******************. ....

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_013715

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection