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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_004463 Bradyrhizobium diazoefficiens USDA 110, complete genome 0 crisprs RT,csa3,DEDDh,WYL,PD-DExK 0 0 10 0

Results visualization

1. NC_004463
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1429126 : 1436216 6 Salmonella_phage(16.67%) NA NA
DBSCAN-SWA_2 1754830 : 1906013 93 Paenibacillus_phage(16.67%) transposase,integrase attL 1780120:1780138|attR 1798755:1798773
DBSCAN-SWA_3 1937433 : 2081152 91 Paenibacillus_phage(16.67%) transposase NA
DBSCAN-SWA_4 2118639 : 2163800 30 Acidithiobacillus_phage(50.0%) transposase NA
DBSCAN-SWA_5 2244816 : 2315030 54 Acinetobacter_phage(12.5%) transposase,tRNA,integrase attL 2281443:2281459|attR 2323252:2323268
DBSCAN-SWA_6 3219228 : 3228815 8 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_7 5254010 : 5264192 12 uncultured_Mediterranean_phage(88.89%) tRNA NA
DBSCAN-SWA_8 5692263 : 5749006 60 Bradyrhizobium_phage(22.22%) transposase,tRNA,integrase,protease attL 5717827:5717843|attR 5754156:5754172
DBSCAN-SWA_9 8974970 : 9015573 30 Klebsiella_phage(12.5%) transposase,integrase attL 8965395:8965411|attR 8979567:8979583
DBSCAN-SWA_10 9027229 : 9080857 54 Shigella_phage(33.33%) transposase,head,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage