CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_005364	Mycoplasma mycoides subsp. mycoides SC str. PG1 chromosome, complete genome	2 crisprs	NA	0	2	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_005364_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_005364_1

990690-990826

Orphan

Consensus_repeat	Method
GATAATAGATATGATCAAAATCA	PILER-CR

2 spacers

The CRISPR arrays of NC_005364_1

>merge|NC_005364|1|990690-990826|PILER-CR
GATAGATATTATCAAAATGATAACAAAAATAACAATTATCATAATCAGTACTATGATAATAGATATGATCAAAATCAATATAGTGATTATGATGATGACAGATATTATGATCAAGATTATAGATATGATCAAAATTA

>NC_005364|1|1|990690-990826|PILER-CR
GATAGATATTATCAAAATGATAA	CAAAAATAACAATTATCATAATCAGTACTATGAT
AATAGATATGATCAAAATCAATA	TAGTGATTATGATGATGACAGATATTATGATCAAGAT
TATAGATATGATCAAAATTA

Protein	Signature genes	Signature genes Name	Protein_function
NC_005364.2\|NP_975836.1\|986471_986636_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224207
NC_005364.2\|NP_975840.1\|991406_991817_+\|hypothetical-protein	unknown	unknown	unknown
NC_005364.2\|NP_975830.1\|978816_980847_+\|PTS-system-glucose-specific-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|182245
NC_005364.2\|NP_975832.1\|982421_984095_-\|IS1634AX-transposase	unknown	unknown	gnl\|CDD\|227708
NC_005364.2\|NP_975849.1\|1001654_1001819_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224207
NC_005364.2\|NP_975845.1\|997665_998394_+\|glucokinase	unknown	unknown	gnl\|CDD\|224851
NC_005364.2\|NP_975841.1\|991857_993531_-\|IS1634CE-transposase	unknown	unknown	gnl\|CDD\|227708
NC_005364.2\|NP_975831.1\|981110_982085_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365903
NC_005364.2\|NP_975848.1\|1001287_1001611_-\|membrane-arginine-transporter	unknown	unknown	gnl\|CDD\|224207
NC_005364.2\|NP_975846.1\|998604_1000278_-\|IS1634AZ-transposase	unknown	unknown	gnl\|CDD\|227708
NC_005364.2\|NP_975842.1\|993695_993947_+\|hypothetical-protein	unknown	unknown	unknown
NC_005364.2\|NP_975847.1\|1000369_1001275_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NC_005364.2\|NP_975833.1\|984306_985092_+\|glucokinase	unknown	unknown	gnl\|CDD\|224851
NC_005364.2\|NP_975834.1\|985159_986092_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NC_005364.2\|NP_975829.1\|976698_978372_+\|IS1634AL-transposase	unknown	unknown	gnl\|CDD\|227708
NC_005364.2\|NP_975835.1\|986104_986428_-\|membrane-arginine-transporter	unknown	unknown	gnl\|CDD\|224207
NC_005364.2\|NP_975844.1\|996290_997265_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365903
NC_005364.2\|NP_975838.1\|987495_990324_-\|P-type-Mg(2+)-transport-ATPase	unknown	unknown	gnl\|CDD\|319772
NC_005364.2\|NP_975843.1\|993996_996027_+\|PTS-system-glucose-specific-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|182245
NC_005364.2\|NP_975837.1\|986724_986970_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224207

Protein	Function_ID	Function_description	E-value
NC_005364.2\|NP_975836.1\|986471_986636_-\|hypothetical-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0.00386312
NC_005364.2\|NP_975830.1\|978816_980847_+\|PTS-system-glucose-specific-transporter-subunit-IIBC	gnl\|CDD\|182245	PRK10110, PRK10110, PTS maltose transporter subunit IICB.	5.84941e-80
NC_005364.2\|NP_975832.1\|982421_984095_-\|IS1634AX-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	2.77276e-18
NC_005364.2\|NP_975849.1\|1001654_1001819_-\|hypothetical-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0.000826692
NC_005364.2\|NP_975841.1\|991857_993531_-\|IS1634CE-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	2.45842e-18
NC_005364.2\|NP_975831.1\|981110_982085_+\|hypothetical-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.12068e-40
NC_005364.2\|NP_975848.1\|1001287_1001611_-\|membrane-arginine-transporter	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	4.1507e-13
NC_005364.2\|NP_975846.1\|998604_1000278_-\|IS1634AZ-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	1.98297e-18
NC_005364.2\|NP_975843.1\|993996_996027_+\|PTS-system-glucose-specific-transporter-subunit-IIBC	gnl\|CDD\|182245	PRK10110, PRK10110, PTS maltose transporter subunit IICB.	7.88032e-80
NC_005364.2\|NP_975847.1\|1000369_1001275_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NC_005364.2\|NP_975833.1\|984306_985092_+\|glucokinase	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	2.82451e-45
NC_005364.2\|NP_975834.1\|985159_986092_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NC_005364.2\|NP_975829.1\|976698_978372_+\|IS1634AL-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	7.7849e-19
NC_005364.2\|NP_975835.1\|986104_986428_-\|membrane-arginine-transporter	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	1.27544e-13
NC_005364.2\|NP_975844.1\|996290_997265_+\|hypothetical-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	2.66384e-40
NC_005364.2\|NP_975838.1\|987495_990324_-\|P-type-Mg(2+)-transport-ATPase	gnl\|CDD\|319772	cd02077, P-type_ATPase_Mg, magnesium transporting ATPase (MgtA), similar to Escherichia coli MgtA and Salmonella typhimurium MgtA. MgtA is a membrane protein which actively transports Mg(2+) into the cytosol with its electro-chemical gradient rather than against the gradient as other cation transporters do. It may act both as a transporter and as a sensor for Mg(2+). In Salmonella typhimurium and Escherichia coli, the two-component system PhoQ/PhoP regulates the transcription of the mgtA gene by sensing Mg(2+) concentrations in the periplasm. MgtA is activated by cardiolipin and it highly sensitive to free magnesium in vitro. It consists of a transmembrane domain and three cytosolic domains: nucleotide-binding domain, phosphorylation domain and actuator domain, and belongs to the P-type ATPase type III subfamily. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_005364.2\|NP_975845.1\|997665_998394_+\|glucokinase	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.76134e-40
NC_005364.2\|NP_975837.1\|986724_986970_-\|hypothetical-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	9.41333e-09

>NC_005364.2|NP_975838.1|987495_990324_-|P-type-Mg(2+)-transport-ATPase
MFLFKKRKFSPKKITRHKKKTHFANERFIKQVSNLEQNEVLEIMQLQHFGLTNEQYESRLKKYGTNELKKKRFNLIAEFLHAFFGPFNIVLLLISLYNFISYATNGFYQDTSSSDSKFELVGALIILVMVLASGLASFIQSLRSHLVTKKISSIVKSTTNIIRHKNDEDVEDYLKITKRNQLDLIRLGEEIDVKQLVPGDLIYLSSGDMLPADVRIIQSTDLFINQSSLTGESIPVEKHANNKKNTNNILDLENICYTGTSVVSGSALAVVLATANDTYFSTISKAILEKRPDSSFTKGIKQVTRMLLIFMLAMVPTVYLAKSIIGTISSGGSFDSIKDNPWFQAIFFAVAVAVGLTPEMLPMIVTTNLANGASKMSKQKVVVKQLEAIQSLGAIDVLCTDKTGTLTNDKIELVDYLRVDKKADPLLLKYLYINSYYQTGLKNPMDKAIVDYVNKHNHNFSIQDITKIDEIPFDFNRRKLTIIFDDENEKRFMVTKGSVEEILNSCTRVIQDDKVVNLTDTFKRQIIAYYETINQQGKRLLGVAYKKIRDNQAKFSPKDEESLIFMGFASFLDTPKPSTKQTIRLLKKYGVDLKILTGDSEPITRAICKMVNLDIKGLVTGEEIDAASEYELKKIVEDNNIFVKLNPLQKVKIIQVLKQNNHVVGYMGDGINDAPVLRQSDVAISVNNATEIAKDASDIILLEKSLLVLEKGIIQGRTIFGNILKYIKITTASNFGNALSVLIGTVWLPFSPMAPAQILLQNLIYDFSQFGVALDRVDATFLTSPQRWQSKDLLPFTTINGTISTFFDLITFAIAGYYFGYINSYNSAIAQNDSLLAAQSLARFHACWFIIGLLSQTFVFQILRTEQLPVIQSRSTWPVYVIGALATIMAFSIVYISQIGSLVQLQSPGLIYIPISIAIIFSYCLTAQLTKVGYKKVFKKWL
>NC_005364.2|NP_975837.1|986724_986970_-|hypothetical-protein
MLYAKKIKKDQTKSVVFKILTEDKEFYLSNSSEKILMDWKKKANLVVFLISLILMVVYLINRLRWYSSYNTFSWFCKMNKK
>NC_005364.2|NP_975836.1|986471_986636_-|hypothetical-protein
MGIINGSSEKQFLKDSINGAYRLLNVCLIIAVAVGIGWILKESPYPRIICWISF
>NC_005364.2|NP_975835.1|986104_986428_-|membrane-arginine-transporter
MFIFFIPLSFLIASTSGFATAVFPLLGGVVIKNNIDILASGSITTFSFASGLVNLITPTSGIVMCSIAVARMDYAKFIKSMAPYMLILTTSSLALLLIGAAIRKTIV
>NC_005364.2|NP_975834.1|985159_986092_-|carbamate-kinase
MSKIVIAIGGNALGNSPTEQLEIVKKTAKSLVDFIVQGNDIVIVHGNGPQVGMINSAFDIANKNETKSPILDFPECGSMSQGYIGYHLQQAIDNELKQRNINKPTVALVTQTLVDKNDAAFLKPTKPIGSFLSETEAKKLAKENDWNIVEDAGRGWRRVIASPKPIDIIEKDAILQLVNNSFIVIAGGGGGIPVYLKDDKLVGIAAVIDKDFAAAKIAEIIDAESLIILTAIDKVMINYKKENQQALDQITLAQAQEYIDQNQFAPGSMLPKVQAVMSFVKKTNGKPAYIGSLEQADKVLQNLSGTKFVK
>NC_005364.2|NP_975833.1|984306_985092_+|glucokinase
MLVGITAPGFVDHNKGIVVMAPNIENGWFNYDLKTEAEFLFKKPVYVINDVNAAALGEYRKGSGLVYKSGLFYWLGTGIGGAIICDGKLISGSHGFAGEFGHGGSNNHNLKCNCGLNNCIEKVCSATTIPNSLLTILKNKYSEFYNKHFSNIKDLDMKLLFEIYNNLNKPIELKNSLLEIYDELFNHISLLIHALDPEVVVIGGGGSLAGNNLLELFQLGIKNKLTDSYKDIVDFKLALLKNDAGMIGAAFYALEQSLKTN
>NC_005364.2|NP_975832.1|982421_984095_-|IS1634AX-transposase
MKKSRNDVKRQWRTSIARVKKGEYLSIGVPRPDNKGFVYRLGYGYLHELKQYHDDPLAIIKAIIANFPLSWTKEQARTKLDEIFKEKKETKKEVLERFKGYEVVEKLFDYFNIFNDCSPTKSTTLKDVVLQLIYQRIKNPISVFNTYKTAKKEKIDTHSKKSFYRSLDYIAKNKDKILRNLNAKICANTNRKIDVLWFDATTTYFETFSREGYKKPGYSKDGKFKEDQIVIGMATDENGIPLHYKIFPGNVADPNTLIPFMLEIADIYEVNSVTIIADKGMSVNRNIRFLESKNWKYIISYRMKAGSKQFKEYVLDEKDYINDGGLIYKTRDIASSYNKKRINGHFRRQIISFSQKRATKDKNNRDILIQNFTKKMNKDNLVSCDDLAGSKKYRFFKPINKGAFYELDIEKIQEDQKYDGYYVYETNRTDLSVKEVINLYSKQWQIESNFKTLKGKLSLRPMYLSTWNHIVGYICLCFISLVFLNYIIYILNSKLGLTGKSKITEHKVINVIKEVKEIEVFVNKQKIETIQVYNDELQESWQTYQILLELLTKEKVT
>NC_005364.2|NP_975831.1|981110_982085_+|hypothetical-protein
MEFVNIEKTINSFIDKKYFKNAAIRIAKDKKIIYSKQFGYNDQNNTILLKGDEIYQAYSMTKPITTLAALLLIDKKLISLDDDLSKYIPSFKNKNIKIWNLLTMTSGLTYSGNKSNTQLQIKKVLDDWKINNYTLEQLCDELSKVDLLFVPSTNWYYGLSLDVLSRVIEVVSNKSYRDFVKEEIFNKLNMNDSDYYLFDKKRKANVFRWTYKDDQNQLDQVENFDFLFQSIDKLPVCNLGGSGLFTTADDYLKFLNVLIDGKLEDSSQLISLDLLNQMKSDQLTKNNLKQFFNWNLNKDYSYGFGGRVRIKNHNDNNVIITSRT
>NC_005364.2|NP_975830.1|978816_980847_+|PTS-system-glucose-specific-transporter-subunit-IIBC
MFKSSFKDKLKAFAANIMPTLSKLSKAFLLPIALLPIAGVFLGVGAAIAANTPEQSTLWFIGKVMGNMGDVCFGNLPVLFCISVALAYTKDSGVAAITAVVGFLVFNGVQAPLFIAPATKTNDKVFEYSLLWYKHVSNSLTGSNMGILSLNTGVLGGIFVGAIAAKCYNKFHQTQLPTAISFFSGTKLVPIITFVAVIPLSFIFMMAWPVIGLGLNKFGQVSGTLPYGTDSLIFEIVERSLVPFGLHHVFYAPLWWTSAGGSIAEGFNTLNTQSEEVKKAFVDSYNKLHGTNHNNLKAIIDIVKAKDALWGAVGDQIISQRVIGHLNILNFTDVEKLGINLGRFQSGKFGFMLLGLPSAALAMWLAAPKENRQQVFGIYFSAAFTCFLTGITEPIEYTFLFVAPWLFYGVHMPLASIAFWATGALQTHITQTVSGGIIDYIVFGIIPFISGAMKPISAFGVLGVAVVLAPIYFCAFYFLIKLFNVKTPGRDGNAEAKLYTKADFKASKGLNVDGSKMSSSADDKEQARLAKAAAIIEYLGGEENIVDVDSCASRLRLTVVDAKKADIDGIKSLGGTTGALVKGNNIQIVYGGEQEAIKPRMQKLLEQQRHEKMMSHSEMKSEEMKSENMGMTCESNQACDKKDEACSCEKDCMCEEPNKVEEQPVSEMKVEKTKSN
>NC_005364.2|NP_975829.1|976698_978372_+|IS1634AL-transposase
MKKSRNDVKRQWRTSIARVKKGEYLSIGVPRPDNKGFVYRLGYGYLHELKQYHDDPLAIIKAIIANFPLSWTKEQARTKLDEIFKEKKETKKEVLERFKGYEVVEKLFDYFNIFNDCSPTKSTTLKDVVLQLIYQRIKNPISVFNTYKTAKKEKIDTHSKNSFYRSLDYIAKNKDEILRNLNAKICANTNRKIDVLWFDATTTYFETFSREGYKKPGYSKDGKFKEDQIVIGMATDENGIPLHYKIFPGNVADPNTLIPFMLEIADIYEVNSVTIIADKGMSVNRNIRFLESKNWKYIISYRMKAGSKQFKEYILDEKDYINDGGLIYKTRDIASSYNKKRINGHFRRQIISFSQKRATKDKNDRGILIQNFTKKMNKDNLVSCDDLAGSKKYRFFKPINKGAFYELDIEKIQEDQKYDGYYVYETNRTDLSVKEVINLYSKQWQIESNFKTLKGKLSLRPMYLSTWNHIVGYICLCFISLVFLNYIIYILNSKLGLTGKSKITEHKVINVIKEVKEIEVFVNKQKIETIQVYNDELQESWQTYQILLELLTKEKVT
>NC_005364.2|NP_975840.1|991406_991817_+|hypothetical-protein
MYVIFKWGSAKLQDHETVVRITLKQYFIQPGQLTPYYILLGIFLAIVLIHIIVLLSVKYVKNALEEYWQAPILSDGKIKDLEKKANRRSLIIFIILIVIAFFILAFFFIFFKVERRKGSIFPTFPSLSIKQENILM
>NC_005364.2|NP_975841.1|991857_993531_-|IS1634CE-transposase
MKKSRNDVKGQWRTSIARVKKGEYLSIGVPRPDNKGFVYRLGYGYLHELKQYHDDPLAIIKAIIANFPLSWTKEQARTKLDEIFKEKKETKKEVLERFKGYEVVEKLFDYFNIFNDCSPTKSTTLKDVVLQLIYQRIKNPISVFNTYKTAKKEKIDTHSKKSFYRSLDYIAKNKDKILRNLNAKICANTNRKIDVLWFDATTTYFETFSREGYKKPGYSKDGKFKEDQIVIGMATDENGIPLHYKIFPGNVADPNTLIPFMLEIADIYEVNSVTIIADKGMSVNRNIRFLESKNWKYIISYRMKAGSKQFKEYILDEKDYINDGGLIYKTRDIASSYNKKRINGHFRRQIISFSQKRATKDKNNRDILIQNFTKKMNKDNLVSCDDLAGSKKYRFFKPINKGAFYELDIEKIQEDQKYDGYYVYETNRTDLSVKEVINLYSKQWQIESNFKTLKGKLSLRPMYLSTWNHIVGYICLCFISLVFLNYIIYILNSKLGLTGKSKITEHKVINVIKEVKEIEVFVNKQKIETIQVYNDELQESWQTYQILLELLTKEKVT
>NC_005364.2|NP_975842.1|993695_993947_+|hypothetical-protein
MLLMLVVKTELIVNLGVLGFGILFILLGLFLFWKQKNKNRYSFENQNRESKNAWEFVKKNFYLLVLTIGFLFIITAIITLITK
>NC_005364.2|NP_975843.1|993996_996027_+|PTS-system-glucose-specific-transporter-subunit-IIBC
MFKSSFKDKLKAFAANIMPTLSKLSKAFLLPIALLPIVGVFLGVGAAIAANTPEQSTLWFIGKVMGNMGDVCFGNLPVLFCISVALAYTKDSGVAAITAVVGFLVFNGVQAPLFIAPATKTNDKVFEYSLLWYKHVSNSLTGSNMGILSLNTGVLGGIFVGAIAAKCYNKFHQTQLPTAISFFSGTKLVPIITFVAVIPLSFIFMMAWPVIGLGLNKFGQVSGTLPYGTDSLIFEIVERSLVPFGLHHVFYAPLWWTSAGGSIAEGFNTLNTQSEEVKKAFVDSYNKLHGTNHNNLKAIIDIVKAKDALWGAVGDQIISQRVIGHLNILNFTDVEKLGINLGRFQSGKFGFMLLGLPSAALAMWLAAPKENRQQVFGIYFSAAFTCFLTGITEPIEYTFLFVAPWLFYGVHMPLASIAFWATGALQTHITQTVSGGIIDYIVFGIIPFISGAMKPISAFGVLGVAVVLAPIYFCAFYFLIKLFNVKTPGRDGNAEAKLYTKADFKASKGLNVDGSKMSSSADDKEQARLAKAAAIIEYLGGEENIVDVDSCASRLRLTVVDAKKADIDGIKSLGGTTGALVKGNNIQIVYGGEQEAIKPRMQKLLEQQRHEKMMSHSEMKSEEMKSENMGMTCESNQACDKKDEACSCEKDCMCEEPNKVEEQPVSEMKVEKTKSN
>NC_005364.2|NP_975844.1|996290_997265_+|hypothetical-protein
MEFVNIEKTINSFIDKKYFKNAAIRIAKDKKIIYSKQFGYNDQNNTILLKGDEIYQAYSMTKPITTLAALLLIDKKLISLDDDLSKYIPSFKNKNIKIWNLLTMTSGLTYSGNKSNTQLQIKKVLDDWKINNYTLEQLCDELSKVDLLFVPSTNWYYGLSLDVLSRVIEVVSNKSYRDFVKEEIFNKLNMNDSDYYLFDKKRKANVFRWTYKDDQNQLDQVENFDFLFQSIDKLPVCNLGGSGLFTTADDYLKFLNVLIDGKLEDSSQLISLDLLNQMKSDQLTKNNLKQFFNWNLNEDYSYGFGGRVRIKNHNDNNVIITSRT
>NC_005364.2|NP_975845.1|997665_998394_+|glucokinase
MAPNIENGWFNYDLKTEAEFLFKKPVYVINDVNAAALGEYRKGSGLVYKSGLFYWLGIGIGGAIICDGKLISGSHGFAGEFGHGGSNNHNLKCNCGLNNCIEKVCSATTIPNSLLTILKNKYSEFYNKHFSNIKDLDMKLLFEIYNNLNKPIELKNSLLEIYDELFNHISLLIHALDPEVVVIGGGGSLAGNNLLELFQLGVKNKLTDSYKDIVDFKLALLKNDAGMIGAAFYALEQSLKTN
>NC_005364.2|NP_975846.1|998604_1000278_-|IS1634AZ-transposase
MKKSRNDVKRQWRTSIARVKKGEYLSIGVPRPDNKGFVYRLGYGYLHELKQYHDDPLAIIKAIIANFPLSWTKEQARTKLDEIFKEKKETKKEVLERFKGYEVVEKLFDYFNIFNDCSPTKSTTLKDVVLQLIYQRIKNPISVFNTYKTAKKEKIDTHSKNSFYRSLDYIAKNKDEILRNLNAKICANTNRKIDVLWFDATTTYFETFSREGYKKPGYSKDGKFKEDQIVIGMATDENGIPLHYKIFPGNVADPNTLIPFMLEIADIYEVNSVTIIADKGMCVNRNIRFLESKNWKYIISYRMKAGSKQFKEYILDEKDYINDGGLIYKTRDIASSYNKKRINGHFRRQIISFSQKRATKDKNDRDILIQNFTKKMNKDNLVSCDDLAGSKKYRFFKPINKGAFYELDIEKIQEDQKYDGYYVYETNRTDLSVKEVINLYSKQWQIESNFKTLKGKLSLRPMYLSTWNHIVGYICLCFISLVFLNYIIYILNSKLGLTGKSKITEHKVINVIKEVKEIEVFVNKQKIETIQVYNDELQESWQTYQILLELLTKEKVT
>NC_005364.2|NP_975847.1|1000369_1001275_-|carbamate-kinase
MSKIVIAIGGNALGNSPTEQLEIVKKTAKSLVDFIVQGNDIVIVHGNGPQVGMINSAFDIANKNETKSPILDFPECGSMSQGYIGYHLQQTIDNELKQRNINKPTVALVTQTLIDKNDAAFLKPTKPIGSFLSETEAKKLAKENDWNIVEDAGRGWRRVIASPKPIDIIEKDAILQLVNNSFIVIAGGGGGIPVYLKDDKLVGIAAVIDKDFAAAKIAEIIDAESLIILTAIDKVMINYKKENQQALDQITLAQAQEYIDQNQFAPGSMLPKVQAVMSFVKKTNGKPAYIGSLEQAPTFPT
>NC_005364.2|NP_975848.1|1001287_1001611_-|membrane-arginine-transporter
MFIFFIPLSFLIASTSGFATAVFPLLGGVVIKNNIDILASGSITTFSFTSGLVNLITPTSGIVMCSIAVARMDYAKFIKSMAPYMLILTTSSLALLLIGAAIRKTIV
>NC_005364.2|NP_975849.1|1001654_1001819_-|hypothetical-protein
MGIINGSSEKQFLKDSINGASRLLNVCLIIAVAVGIGWILKESPYPRIICWISF

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Crispr_ID: NC_005364_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_005364_2

1005863-1005999

Orphan

Consensus_repeat	Method
GATAATAGATATGATCAAAATCA	PILER-CR

2 spacers

The CRISPR arrays of NC_005364_2

>merge|NC_005364|2|1005863-1005999|PILER-CR
GATAGATATTATCAAAATGATAACAAAAATAACAATTATCATAATCAGTACTATGATAATAGATATGATCAAAATCAATATAGTGATTATGATGATGACAGATATTATGATCAAGATTATAGATATGATCAAAATTA

>NC_005364|2|2|1005863-1005999|PILER-CR
GATAGATATTATCAAAATGATAA	CAAAAATAACAATTATCATAATCAGTACTATGAT
AATAGATATGATCAAAATCAATA	TAGTGATTATGATGATGACAGATATTATGATCAAGAT
TATAGATATGATCAAAATTA

Protein	Signature genes	Signature genes Name	Protein_function
NC_005364.2\|NP_975862.1\|1015952_1016636_-\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NC_005364.2\|NP_975849.1\|1001654_1001819_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224207
NC_005364.2\|NP_975851.1\|1003570_1005505_-\|magnesium-ABC-transporter-ATPase	unknown	unknown	gnl\|CDD\|319772
NC_005364.2\|NP_975853.1\|1008926_1009226_-\|ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|213395
NC_005364.2\|NP_975858.1\|1013641_1014187_-\|ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|349951
NC_005364.2\|NP_975843.1\|993996_996027_+\|PTS-system-glucose-specific-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|182245
NC_005364.2\|NP_975857.1\|1013094_1013640_-\|ATP-synthase-F0F1-subunit-delta	unknown	unknown	gnl\|CDD\|184053
NC_005364.2\|NP_975847.1\|1000369_1001275_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NC_005364.2\|NP_975846.1\|998604_1000278_-\|IS1634AZ-transposase	unknown	unknown	gnl\|CDD\|227708
NC_005364.2\|NP_975844.1\|996290_997265_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365903
NC_005364.2\|NP_975854.1\|1009225_1010653_-\|ATP-synthase-F0F1-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NC_005364.2\|NP_975861.1\|1015431_1015812_-\|hypothetical-protein	unknown	unknown	unknown
NC_005364.2\|NP_975848.1\|1001287_1001611_-\|membrane-arginine-transporter	unknown	unknown	gnl\|CDD\|224207
NC_005364.2\|NP_975856.1\|1011505_1013083_-\|ATP-synthase-F0F1-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NC_005364.2\|NP_975855.1\|1010661_1011504_-\|ATP-synthase-F0F1-subunit-gamma	unknown	unknown	gnl\|CDD\|235535
NC_005364.2\|NP_975845.1\|997665_998394_+\|glucokinase	unknown	unknown	gnl\|CDD\|224851
NC_005364.2\|NP_975859.1\|1014215_1014521_-\|ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|235949
NC_005364.2\|NP_975842.1\|993695_993947_+\|hypothetical-protein	unknown	unknown	unknown
NC_005364.2\|NP_975850.1\|1001907_1002153_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224207
NC_005364.2\|NP_975860.1\|1014550_1015414_-\|ATP-synthase-F0F1-subunit-A	unknown	unknown	gnl\|CDD\|235617

Protein	Function_ID	Function_description	E-value
NC_005364.2\|NP_975862.1\|1015952_1016636_-\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	7.21577e-123
NC_005364.2\|NP_975849.1\|1001654_1001819_-\|hypothetical-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0.000826692
NC_005364.2\|NP_975851.1\|1003570_1005505_-\|magnesium-ABC-transporter-ATPase	gnl\|CDD\|319772	cd02077, P-type_ATPase_Mg, magnesium transporting ATPase (MgtA), similar to Escherichia coli MgtA and Salmonella typhimurium MgtA. MgtA is a membrane protein which actively transports Mg(2+) into the cytosol with its electro-chemical gradient rather than against the gradient as other cation transporters do. It may act both as a transporter and as a sensor for Mg(2+). In Salmonella typhimurium and Escherichia coli, the two-component system PhoQ/PhoP regulates the transcription of the mgtA gene by sensing Mg(2+) concentrations in the periplasm. MgtA is activated by cardiolipin and it highly sensitive to free magnesium in vitro. It consists of a transmembrane domain and three cytosolic domains: nucleotide-binding domain, phosphorylation domain and actuator domain, and belongs to the P-type ATPase type III subfamily. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_005364.2\|NP_975853.1\|1008926_1009226_-\|ATP-synthase-subunit-epsilon	gnl\|CDD\|213395	cd12152, F1-ATPase_delta, mitochondrial ATP synthase delta subunit. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.	4.64566e-18
NC_005364.2\|NP_975858.1\|1013641_1014187_-\|ATP-synthase-subunit-B	gnl\|CDD\|349951	cd06503, ATP-synt_Fo_b, F-type ATP synthase, membrane subunit b. Membrane subunit b is a component of the Fo complex of FoF1-ATP synthase. The F-type ATP synthases (FoF1-ATPase) consist of two structural domains: the F1 (assembly factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha (or A), beta (B), gamma (C), delta (D) and epsilon (E) subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons through the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Candidatus Methanoperedens.	1.64918e-24
NC_005364.2\|NP_975843.1\|993996_996027_+\|PTS-system-glucose-specific-transporter-subunit-IIBC	gnl\|CDD\|182245	PRK10110, PRK10110, PTS maltose transporter subunit IICB.	7.88032e-80
NC_005364.2\|NP_975857.1\|1013094_1013640_-\|ATP-synthase-F0F1-subunit-delta	gnl\|CDD\|184053	PRK13436, PRK13436, F0F1 ATP synthase subunit delta; Provisional.	9.93019e-59
NC_005364.2\|NP_975847.1\|1000369_1001275_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NC_005364.2\|NP_975846.1\|998604_1000278_-\|IS1634AZ-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	1.98297e-18
NC_005364.2\|NP_975844.1\|996290_997265_+\|hypothetical-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	2.66384e-40
NC_005364.2\|NP_975854.1\|1009225_1010653_-\|ATP-synthase-F0F1-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NC_005364.2\|NP_975848.1\|1001287_1001611_-\|membrane-arginine-transporter	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	4.1507e-13
NC_005364.2\|NP_975856.1\|1011505_1013083_-\|ATP-synthase-F0F1-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NC_005364.2\|NP_975855.1\|1010661_1011504_-\|ATP-synthase-F0F1-subunit-gamma	gnl\|CDD\|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	1.83401e-112
NC_005364.2\|NP_975845.1\|997665_998394_+\|glucokinase	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.76134e-40
NC_005364.2\|NP_975859.1\|1014215_1014521_-\|ATP-synthase-subunit-C	gnl\|CDD\|235949	PRK07159, PRK07159, F0F1 ATP synthase subunit C; Validated.	1.95577e-15
NC_005364.2\|NP_975850.1\|1001907_1002153_-\|hypothetical-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	9.41333e-09
NC_005364.2\|NP_975860.1\|1014550_1015414_-\|ATP-synthase-F0F1-subunit-A	gnl\|CDD\|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	2.36833e-35

>NC_005364.2|NP_975851.1|1003570_1005505_-|magnesium-ABC-transporter-ATPase
MFLFKKRKFSPKKITRHKKKTHFANERFIKQVSNLEQNEVLEIMQLQHFGLTNEQYESRLKKYGTNELKKKRFNLIAEFLHAFFGPFNIVLLLISLYNFISYATNGFYQDTSSSDSKFELVGALIILVMVLASGLASFIQSLRSHLVTKKISSIVKSTTNIIRHKNDEDVEDYLKITKRNQLDLIRLGEEIDVKQLVPGDLIYLSSGDMLPADVRIIQSTDLFINQSSLTGESIPVEKHANNKKNTNNILDLENICYTGTSVVSGSALAVVLATANDTYFSTISKAILEKRPDSSFTKGIKQVTRMLLIFMFVMVPTVYLAKSIIGTISSGGSFDSIKDNPWFQAIFFAVAVAVGLTPEMLPMIVTTNLANGASKMSKQKVVVKQLEAIQSLGAIDVLCTDKTGTLTNDKIELVDYLRVDKKADPLLLKYLYINSYYQTGLKNPMDKAIVDYVNKHNHNFSIQDITKIDEIPFDFNRRKLTIIFDDENEKRFMVTKGSVEEILNSCTRVIQDDKVVNLTDTFKRQIIAYYETINQQGKRLLGVAYKKIRDNQAKFSPKDEESLIFMGFASFLDTPKPSTKQTIRLLKKYGVDLKILTGDSEPITRAICKMVNLDIKGLVTGEEIDAASEYELKKLLKIIIFLLS
>NC_005364.2|NP_975850.1|1001907_1002153_-|hypothetical-protein
MLYAKKIKKDQTKSVVFKILTEDKEFYLSNSSEKILMDWKKKANLVVFLISLILMVVYLINRLRWYSSYNTFSWFCKMNKK
>NC_005364.2|NP_975849.1|1001654_1001819_-|hypothetical-protein
MGIINGSSEKQFLKDSINGASRLLNVCLIIAVAVGIGWILKESPYPRIICWISF
>NC_005364.2|NP_975848.1|1001287_1001611_-|membrane-arginine-transporter
MFIFFIPLSFLIASTSGFATAVFPLLGGVVIKNNIDILASGSITTFSFTSGLVNLITPTSGIVMCSIAVARMDYAKFIKSMAPYMLILTTSSLALLLIGAAIRKTIV
>NC_005364.2|NP_975847.1|1000369_1001275_-|carbamate-kinase
MSKIVIAIGGNALGNSPTEQLEIVKKTAKSLVDFIVQGNDIVIVHGNGPQVGMINSAFDIANKNETKSPILDFPECGSMSQGYIGYHLQQTIDNELKQRNINKPTVALVTQTLIDKNDAAFLKPTKPIGSFLSETEAKKLAKENDWNIVEDAGRGWRRVIASPKPIDIIEKDAILQLVNNSFIVIAGGGGGIPVYLKDDKLVGIAAVIDKDFAAAKIAEIIDAESLIILTAIDKVMINYKKENQQALDQITLAQAQEYIDQNQFAPGSMLPKVQAVMSFVKKTNGKPAYIGSLEQAPTFPT
>NC_005364.2|NP_975846.1|998604_1000278_-|IS1634AZ-transposase
MKKSRNDVKRQWRTSIARVKKGEYLSIGVPRPDNKGFVYRLGYGYLHELKQYHDDPLAIIKAIIANFPLSWTKEQARTKLDEIFKEKKETKKEVLERFKGYEVVEKLFDYFNIFNDCSPTKSTTLKDVVLQLIYQRIKNPISVFNTYKTAKKEKIDTHSKNSFYRSLDYIAKNKDEILRNLNAKICANTNRKIDVLWFDATTTYFETFSREGYKKPGYSKDGKFKEDQIVIGMATDENGIPLHYKIFPGNVADPNTLIPFMLEIADIYEVNSVTIIADKGMCVNRNIRFLESKNWKYIISYRMKAGSKQFKEYILDEKDYINDGGLIYKTRDIASSYNKKRINGHFRRQIISFSQKRATKDKNDRDILIQNFTKKMNKDNLVSCDDLAGSKKYRFFKPINKGAFYELDIEKIQEDQKYDGYYVYETNRTDLSVKEVINLYSKQWQIESNFKTLKGKLSLRPMYLSTWNHIVGYICLCFISLVFLNYIIYILNSKLGLTGKSKITEHKVINVIKEVKEIEVFVNKQKIETIQVYNDELQESWQTYQILLELLTKEKVT
>NC_005364.2|NP_975845.1|997665_998394_+|glucokinase
MAPNIENGWFNYDLKTEAEFLFKKPVYVINDVNAAALGEYRKGSGLVYKSGLFYWLGIGIGGAIICDGKLISGSHGFAGEFGHGGSNNHNLKCNCGLNNCIEKVCSATTIPNSLLTILKNKYSEFYNKHFSNIKDLDMKLLFEIYNNLNKPIELKNSLLEIYDELFNHISLLIHALDPEVVVIGGGGSLAGNNLLELFQLGVKNKLTDSYKDIVDFKLALLKNDAGMIGAAFYALEQSLKTN
>NC_005364.2|NP_975844.1|996290_997265_+|hypothetical-protein
MEFVNIEKTINSFIDKKYFKNAAIRIAKDKKIIYSKQFGYNDQNNTILLKGDEIYQAYSMTKPITTLAALLLIDKKLISLDDDLSKYIPSFKNKNIKIWNLLTMTSGLTYSGNKSNTQLQIKKVLDDWKINNYTLEQLCDELSKVDLLFVPSTNWYYGLSLDVLSRVIEVVSNKSYRDFVKEEIFNKLNMNDSDYYLFDKKRKANVFRWTYKDDQNQLDQVENFDFLFQSIDKLPVCNLGGSGLFTTADDYLKFLNVLIDGKLEDSSQLISLDLLNQMKSDQLTKNNLKQFFNWNLNEDYSYGFGGRVRIKNHNDNNVIITSRT
>NC_005364.2|NP_975843.1|993996_996027_+|PTS-system-glucose-specific-transporter-subunit-IIBC
MFKSSFKDKLKAFAANIMPTLSKLSKAFLLPIALLPIVGVFLGVGAAIAANTPEQSTLWFIGKVMGNMGDVCFGNLPVLFCISVALAYTKDSGVAAITAVVGFLVFNGVQAPLFIAPATKTNDKVFEYSLLWYKHVSNSLTGSNMGILSLNTGVLGGIFVGAIAAKCYNKFHQTQLPTAISFFSGTKLVPIITFVAVIPLSFIFMMAWPVIGLGLNKFGQVSGTLPYGTDSLIFEIVERSLVPFGLHHVFYAPLWWTSAGGSIAEGFNTLNTQSEEVKKAFVDSYNKLHGTNHNNLKAIIDIVKAKDALWGAVGDQIISQRVIGHLNILNFTDVEKLGINLGRFQSGKFGFMLLGLPSAALAMWLAAPKENRQQVFGIYFSAAFTCFLTGITEPIEYTFLFVAPWLFYGVHMPLASIAFWATGALQTHITQTVSGGIIDYIVFGIIPFISGAMKPISAFGVLGVAVVLAPIYFCAFYFLIKLFNVKTPGRDGNAEAKLYTKADFKASKGLNVDGSKMSSSADDKEQARLAKAAAIIEYLGGEENIVDVDSCASRLRLTVVDAKKADIDGIKSLGGTTGALVKGNNIQIVYGGEQEAIKPRMQKLLEQQRHEKMMSHSEMKSEEMKSENMGMTCESNQACDKKDEACSCEKDCMCEEPNKVEEQPVSEMKVEKTKSN
>NC_005364.2|NP_975842.1|993695_993947_+|hypothetical-protein
MLLMLVVKTELIVNLGVLGFGILFILLGLFLFWKQKNKNRYSFENQNRESKNAWEFVKKNFYLLVLTIGFLFIITAIITLITK
>NC_005364.2|NP_975853.1|1008926_1009226_-|ATP-synthase-subunit-epsilon
MGIKLKILTPNGTFVENKEVDIINLKTIDGDIGVLANMAPFVTALRNDTLNFKIKNTYTYIHVDQGLVVISKNQCKIITENLYLVDKQDRELPTPLKLT
>NC_005364.2|NP_975854.1|1009225_1010653_-|ATP-synthase-F0F1-subunit-beta
MVSKNTTDKKKNQSIGKVIQVLGSVVDVKFSENSIPKIYDALIVDNNGKKLVLEVEQNIGDEIVRTIAMGPTEGLKRGLDVINTNSPITAPTGMEVLGRMFNVLGDPIDEKPDLDVKREPIHKDAPKYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNIAKAHNGVSVFAGVGERTREGNDLYHEFIEAGVLNKTCLVFGQMNEPPGARMRVALTGLTIAEYFRDQKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASSSRVLDPEIVGQEHYDIALRVQIALQKYQDLQSIIAILGMDELSEEDKLIVQRARKIRNFLSQSFFVGEKFTGRPGVFVKVNDTVRSFKSILDGEVDYIPETYFLYSSIIDDVIEKYNKDKDK
>NC_005364.2|NP_975855.1|1010661_1011504_-|ATP-synthase-F0F1-subunit-gamma
MPNLKGLKTEILSVKNISRITNAMQLVALAKLRKISKKVIDTHNYVSEVYSLFNDIISQVDKSVFLKDSNFETKKTLWIVINSNLGLCGGYNSNVNKLVLQNLKTNDEIFAIGSKAVSFFRSKKIKIKDQVTNIDINFTNEKAKIISNDLLAMYINREFDEIKIVYTKFINNVTFEPAIIRIFPIVKSELHFTHKQKIIFEPDADQILNNTISIYINAIIYGTVIESQVSEQASRRTAMENATNNGQNLEHELSLKYNRQRQGAITQEISEIVSGANAQS
>NC_005364.2|NP_975856.1|1011505_1013083_-|ATP-synthase-F0F1-subunit-alpha
MSFNIKEISEMIEEQIRNYNKEIVQTEQGTVVSVGDGIALIYGLDNAIMGEFLKFPNNVYGMVLNLEESAVGAIILGDETLIREGDIVKRTNKVVETPVGDALLGRVINALSKPIDNLGPINFTKTRPIERVATSVMARRSVSQPLETGILAIDSAIPIGKGQRELIIGDRQTGKTAIAIDAIINQKNKNVKCIYVAIGQKDSTIVQVVEKLKKYGAMEYTVVVNAGASQPAPLQYLSPYVGVTIAEEWMENGNDVLIIYDDLSKHAVSYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAARVNENYGGGSITALPIIETQAGDISAYIPTNVISITDGQIFLSSELFNQGVRPAVDIGSSVSRVGSAAQIKSIKQVSGTLKLELAQYYELELFAKFGSDLDEATKATLDQGAKIIQMLIQKQHNPLEQVDQAILLLTIKSHLIKWLPVESIYNFKHEILSHFKNDKHAFELRKKLDEQKTFDDQLQQQILKEAQKVVLKITKNINEYKPGTFGNISEYQNLGK
>NC_005364.2|NP_975857.1|1013094_1013640_-|ATP-synthase-F0F1-subunit-delta
MILKETTINNYATALFNIAVKEKLVDDYIIQVDALIKSLADKDEFNKLVTYSNKEQKKQAILIIENTFSSFGFDIYLINALKILVENQLFINTRMILKVLYKKLLAYKNIVLGEVYSTEKLTKTQLNAIKKKISNKVNKKVELVNKIDPTLIGGIKVSVEDKVFDGSIKAKLEALKKQMNT
>NC_005364.2|NP_975858.1|1013641_1014187_-|ATP-synthase-subunit-B
MLFQGFNVVINATTQGVPKIVESLFPNLPNFIAHLLATIILVIVLTKLVYKPYKQMIEKQTQKITEVLSDAIEKQTQANIKIKQANTLLEDAKTESVSILKTARIDAEIQKNKIIDNANLQAKNIQSYAQNSIKQEKIKAQLEIKNTIVNLAINSAEKILNKEIDKNTNKQLIEEFIKELD
>NC_005364.2|NP_975859.1|1014215_1014521_-|ATP-synthase-subunit-C
MLHTAFISNILANYLGAMSIILPNILTVSGDIKYIGAGLASVGILGTGVGQGLIGQGACLAIGRNPEMASKVTSTMIVSAGISESGAIYSLVIAILLIFVV
>NC_005364.2|NP_975860.1|1014550_1015414_-|ATP-synthase-F0F1-subunit-A
MKLVTFASIKDNLATWNKFNGILITILLVVIIVCIISIIYNKKIRNYNIDDKMPGFLVLVNVFVASVENIVVSILGKKYQKLTPYIMYLFAYIFIGCLLSILGLEAQGTSFTVTLSMGMVTFIMIYYFGIKYQKLAFFKRFRNPVELFTQFTPLISISFRLFGNLIGGSIILGLLYGLLIGFQLSWGVNNIQVDGMTRWASYAIWNPELVENGYLKQYEYWWAGLNLFTTPIMPFLHMYFDLFSGVIQSTVFAMLTLSYWSAQIDDNEKRADLIDQVKEEITNKYQS
>NC_005364.2|NP_975861.1|1015431_1015812_-|hypothetical-protein
MLKQTFLDKQLKKALIFNTIWWLILIIIFIVFSVIKTLNWINLISLVIAYFCSYIAIFLLFLTKLLIIKYQNPYLIYLMFLLRIGIYVIPLFIALLLSDENIFSYLGILIGYSSNLVIPFFIHKRL
>NC_005364.2|NP_975862.1|1015952_1016636_-|uracil-phosphoribosyltransferase
MLIRIICYTIIRAHKKGEHIMAFTEIKHPLIIDKLTRMRKTETSSKDFRENLNEIAQLMVYEIFRDLKLEPVEITTPVAKTTGYTINQPVVLVPILRAGIGMLDGIQKLIPTARIAHVGLYRDETTLEIHQYFAKTTKDIDKSYVIVVDPMLATGGSACKAIDIVKQWGAKEVKFVCLVAVEPGIKRLQEQHPDVEIYAASKDEKLNEKGYIIPGLGDAGDRIFGTK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	KX550065	Streptococcus phage SpGS-1, complete genome	1780-1813	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	KT337348	Streptococcus phage phiARI0378, partial genome	35768-35801	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	KY065487	Streptococcus phage IPP48, complete genome	1573-1606	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	AJ400629	Streptococcus pneumoniae bacteriophage MM1 attachment site attP	78-111	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	KT337358	Streptococcus phage phiARI0468-4, complete genome	35716-35749	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	KT337347	Streptococcus phage phiARI0285-3, partial genome	37766-37799	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	KY065491	Streptococcus phage IPP53, complete genome	1572-1605	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	DQ113772	Streptococcus pneumoniae bacteriophage MM1 1998, complete genome	1660-1693	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	AJ302074	Streptococcus pneumoniae bacteriophage MM1 complete genome	1660-1693	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	NC_022791	Streptococcus phage phiBHN167 complete genome	30134-30167	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	KX550065	Streptococcus phage SpGS-1, complete genome	1780-1813	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	KT337348	Streptococcus phage phiARI0378, partial genome	35768-35801	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	KY065487	Streptococcus phage IPP48, complete genome	1573-1606	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	AJ400629	Streptococcus pneumoniae bacteriophage MM1 attachment site attP	78-111	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	KT337358	Streptococcus phage phiARI0468-4, complete genome	35716-35749	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	KT337347	Streptococcus phage phiARI0285-3, partial genome	37766-37799	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	KY065491	Streptococcus phage IPP53, complete genome	1572-1605	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	DQ113772	Streptococcus pneumoniae bacteriophage MM1 1998, complete genome	1660-1693	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	AJ302074	Streptococcus pneumoniae bacteriophage MM1 complete genome	1660-1693	7	0.794
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	NC_022791	Streptococcus phage phiBHN167 complete genome	30134-30167	7	0.794
NC_005364_1	1.1\|990713\|34\|NC_005364\|PILER-CR	990713-990746	34	NZ_CP009064	Borreliella afzelii K78 plasmid lp28-3, complete sequence	3129-3162	10	0.706
NC_005364_2	2.1\|1005886\|34\|NC_005364\|PILER-CR	1005886-1005919	34	NZ_CP009064	Borreliella afzelii K78 plasmid lp28-3, complete sequence	3129-3162	10	0.706

1. spacer 1.1|990713|34|NC_005364|PILER-CR matches to KX550065 (Streptococcus phage SpGS-1, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

2. spacer 1.1|990713|34|NC_005364|PILER-CR matches to KT337348 (Streptococcus phage phiARI0378, partial genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

3. spacer 1.1|990713|34|NC_005364|PILER-CR matches to KY065487 (Streptococcus phage IPP48, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

4. spacer 1.1|990713|34|NC_005364|PILER-CR matches to AJ400629 (Streptococcus pneumoniae bacteriophage MM1 attachment site attP) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

5. spacer 1.1|990713|34|NC_005364|PILER-CR matches to KT337358 (Streptococcus phage phiARI0468-4, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

6. spacer 1.1|990713|34|NC_005364|PILER-CR matches to KT337347 (Streptococcus phage phiARI0285-3, partial genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

7. spacer 1.1|990713|34|NC_005364|PILER-CR matches to KY065491 (Streptococcus phage IPP53, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

8. spacer 1.1|990713|34|NC_005364|PILER-CR matches to DQ113772 (Streptococcus pneumoniae bacteriophage MM1 1998, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

9. spacer 1.1|990713|34|NC_005364|PILER-CR matches to AJ302074 (Streptococcus pneumoniae bacteriophage MM1 complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

10. spacer 1.1|990713|34|NC_005364|PILER-CR matches to NC_022791 (Streptococcus phage phiBHN167 complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

11. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to KX550065 (Streptococcus phage SpGS-1, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

12. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to KT337348 (Streptococcus phage phiARI0378, partial genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

13. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to KY065487 (Streptococcus phage IPP48, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

14. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to AJ400629 (Streptococcus pneumoniae bacteriophage MM1 attachment site attP) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

15. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to KT337358 (Streptococcus phage phiARI0468-4, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

16. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to KT337347 (Streptococcus phage phiARI0285-3, partial genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

17. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to KY065491 (Streptococcus phage IPP53, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

18. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to DQ113772 (Streptococcus pneumoniae bacteriophage MM1 1998, complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

19. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to AJ302074 (Streptococcus pneumoniae bacteriophage MM1 complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

20. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to NC_022791 (Streptococcus phage phiBHN167 complete genome) position: , mismatch: 7, identity: 0.794

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
caacaaaaataacaattatgataatagcaattat	Protospacer
.****************** ***** .  *.***

21. spacer 1.1|990713|34|NC_005364|PILER-CR matches to NZ_CP009064 (Borreliella afzelii K78 plasmid lp28-3, complete sequence) position: , mismatch: 10, identity: 0.706

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
aaacaagactaacaattatcataatataaaaaac	Protospacer
 *****.* ****************  . *  *.

22. spacer 2.1|1005886|34|NC_005364|PILER-CR matches to NZ_CP009064 (Borreliella afzelii K78 plasmid lp28-3, complete sequence) position: , mismatch: 10, identity: 0.706

taacaaaaataacaattatcataatcagtactat	CRISPR spacer
aaacaagactaacaattatcataatataaaaaac	Protospacer
 *****.* ****************  . *  *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

17077 : 71267

Bacillus_phage(15.38%)

transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975023.1\|17077_18607_-\|tRNA	methionyl-tRNA synthetase	A0A1V0SEZ7	Hokovirus	3.0e-78	35.9
NP_975024.1\|18810_20457_+	prolipoprotein	NA	NA	NA	NA
NP_975025.1\|20489_22088_+	immunodominant protein P72	NA	NA	NA	NA
NP_975026.1\|22140_23001_-\|transposase	IS1296SQ transposase protein B	A0A1B1P773	Bacillus_phage	1.1e-64	48.1
NP_975027.1\|23009_23552_-\|transposase	IS1296SQ transposase protein A	NA	NA	NA	NA
NP_975028.1\|23627_24614_-	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
NP_975029.1\|24614_25412_-	RpiR family transcriptional regulator	NA	NA	NA	NA
NP_975030.1\|25445_25874_-	PTS system-mannitol-specific transporter subunit IIA	NA	NA	NA	NA
NP_975031.1\|25873_26632_-	sorbitol-6-phosphate dehydrogenase	NA	NA	NA	NA
NP_975032.1\|26631_28194_-	PTS system-mannitol-specific transporter subunit IIBC	NA	NA	NA	NA
NP_975033.1\|28444_28705_-	hypothetical protein	NA	NA	NA	NA
NP_975034.1\|28674_29286_-	DNA recombinase recG	NA	NA	NA	NA
NP_975035.1\|29332_29824_-	hypothetical protein	Q6GYZ7	Mycoplasma_phage	1.7e-19	43.1
NP_975036.1\|30177_30405_-	30S ribosomal protein S18	NA	NA	NA	NA
NP_975037.1\|30424_30865_-	single-strand binding protein	Q4ZAD5	Staphylococcus_virus	1.0e-15	39.6
NP_975038.1\|30876_31290_-	30S ribosomal protein S6	NA	NA	NA	NA
NP_975039.1\|31495_31705_-	cold shock protein	A0A1X9IGI9	Lactococcus_phage	4.2e-12	51.6
NP_975040.1\|31890_32490_+	azoreductase	NA	NA	NA	NA
NP_975041.1\|32526_33561_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.8e-34	35.2
NP_975042.1\|33608_34484_-	heat shock protein Hsp33	NA	NA	NA	NA
NP_975043.1\|34683_37836_-	hypothetical protein	NA	NA	NA	NA
NP_975044.1\|37982_43370_+	permease	NA	NA	NA	NA
NP_975045.1\|43807_44794_+	D-lactate dehydrogenase	M1I636	Acanthocystis_turfacea_Chlorella_virus	9.0e-36	30.9
NP_975046.1\|44812_45937_+	malate permease	NA	NA	NA	NA
NP_975047.1\|46288_47215_+	hypothetical protein	NA	NA	NA	NA
NP_975048.1\|47222_47576_+	hypothetical protein	NA	NA	NA	NA
NP_975049.1\|47779_49453_+\|transposase	IS1634BT transposase	NA	NA	NA	NA
NP_975050.1\|49582_51529_-	ATP-dependent zinc metallopeptidase FtsH	E5EQ50	Micromonas_sp._RCC1109_virus	1.3e-102	47.0
NP_975051.1\|51760_52144_+	hypothetical protein	NA	NA	NA	NA
NP_975052.1\|52236_52605_+	hypothetical protein	NA	NA	NA	NA
NP_975053.1\|52588_53794_-	hypothetical protein	R4TVK3	Phaeocystis_globosa_virus	1.4e-11	26.4
NP_975054.1\|53796_54624_-	hypothetical protein	NA	NA	NA	NA
NP_975055.1\|54675_55398_-	methyltransferase	NA	NA	NA	NA
NP_975056.1\|55397_56138_-	DNA polymerase III subunit delta	NA	NA	NA	NA
NP_975057.1\|56115_56757_-	thymidylate kinase	M1PSC7	Streptococcus_phage	2.7e-41	44.4
NP_975058.1\|56989_57358_-	DNA repair protein RecR	NA	NA	NA	NA
NP_975059.1\|57350_59309_-	DNA polymerase III subunits gamma/tau	A0A1U9WR94	Streptococcus_virus	2.8e-41	38.8
NP_975060.1\|59378_59846_-	cytosine deaminase	NA	NA	NA	NA
NP_975061.1\|59962_60925_-	guanosine 5'-monophosphate oxidoreductase	Q4ZCY7	Staphylococcus_virus	3.4e-112	63.0
NP_975062.1\|61275_61824_-	hypothetical protein	NA	NA	NA	NA
NP_975063.1\|62351_64427_-	hypothetical protein	NA	NA	NA	NA
NP_975064.1\|64604_65054_-	AhpC/TSA family protein	NA	NA	NA	NA
NP_975065.1\|65124_66867_+	PTS system-glucose-specific transporter subunit IIABC	NA	NA	NA	NA
NP_975066.1\|66920_67781_-\|transposase	IS1296IE transposase protein B	A0A1B1P773	Bacillus_phage	5.2e-64	47.7
NP_975067.1\|67789_68344_-\|transposase	IS1296IE transposase protein A	NA	NA	NA	NA
NP_975068.1\|68399_68582_-	hypothetical protein	NA	NA	NA	NA
NP_975069.1\|68765_69014_-	hypothetical protein	NA	NA	NA	NA
NP_975070.1\|68940_69090_-	hypothetical protein	NA	NA	NA	NA
NP_975071.1\|69593_71267_+\|transposase	IS1634BK transposase	NA	NA	NA	NA

DBSCAN-SWA_2

88757 : 162290

Bacillus_phage(23.08%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975084.1\|88757_90431_+\|transposase	IS1634BV transposase	NA	NA	NA	NA
NP_975085.1\|91073_92372_+	hypothetical protein	NA	NA	NA	NA
NP_975086.1\|92412_93141_+	competence protein ComEC	NA	NA	NA	NA
NP_975087.1\|93173_95909_-	phosphonate ABC transporter permease	NA	NA	NA	NA
NP_975088.1\|95912_96665_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.7e-23	35.2
NP_975089.1\|96678_98022_-	prolipoprotein phosphonate ABC transporter	NA	NA	NA	NA
NP_975090.1\|98312_99671_-\|tRNA	asparaginyl-tRNA synthetase	A0A2P1EJK5	Megavirus	1.3e-72	36.2
NP_975091.1\|99679_100519_-	HAD family hydrolase	NA	NA	NA	NA
NP_975092.1\|100529_101660_-	alpha/beta hydrolase	NA	NA	NA	NA
NP_975093.1\|101682_102642_-\|tRNA	tRNA N6-adenosine threonylcarbamoyltransferase	A0A0R6PI74	Moraxella_phage	5.6e-59	39.4
NP_975094.1\|102735_102960_-	hypothetical protein	NA	NA	NA	NA
NP_975095.1\|103159_104518_+\|tRNA	tRNA modification GTPase TrmE	NA	NA	NA	NA
NP_975096.3\|104565_104865_-	30S ribosomal protein S20	NA	NA	NA	NA
NP_975097.1\|105137_105890_-	hypothetical protein	NA	NA	NA	NA
NP_975098.1\|105975_106593_-	hypothetical protein	NA	NA	NA	NA
NP_975099.1\|106683_109518_-	preprotein translocase subunit SecA	NA	NA	NA	NA
NP_975100.1\|109608_110184_+	proline dipeptidase	A0A1X9I5T8	Streptococcus_phage	1.4e-17	31.9
NP_975101.1\|110259_111174_+	5'-3' exonuclease	B6V2K6	Bacillus_phage	8.4e-20	29.1
NP_975102.1\|111333_111888_+	hypothetical protein	NA	NA	NA	NA
NP_975103.1\|112406_113027_+	hypothetical protein	NA	NA	NA	NA
NP_975104.1\|113161_113719_+	hypothetical protein	NA	NA	NA	NA
NP_975105.1\|114282_114558_+	hypothetical protein	NA	NA	NA	NA
NP_975106.1\|114547_115117_+	dephospho-COA kinase	NA	NA	NA	NA
NP_975107.1\|115275_116949_+\|transposase	IS1634BO transposase	NA	NA	NA	NA
NP_975108.1\|117661_119335_-\|transposase	IS1634AP transposase	NA	NA	NA	NA
NP_975109.1\|119427_119877_-	hemolysin A	NA	NA	NA	NA
NP_975110.1\|119876_120092_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
NP_975111.1\|120081_121491_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.8e-45	34.0
NP_975112.1\|121492_121891_-	transcription termination factor nusB	NA	NA	NA	NA
NP_975113.1\|121902_122778_-	hypothetical protein	NA	NA	NA	NA
NP_975114.1\|122832_123012_-	hypothetical protein	NA	NA	NA	NA
NP_975115.1\|123037_123907_-	endonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.0e-26	31.5
NP_975116.1\|123899_124652_-	riboflavin kinase/FAD synthetase	NA	NA	NA	NA
NP_975117.1\|124865_127001_-	hypothetical protein	NA	NA	NA	NA
NP_975118.1\|127250_128600_+	glycosyltransferase	NA	NA	NA	NA
NP_975119.1\|128652_129567_-	glycosyltransferase	NA	NA	NA	NA
NP_975120.1\|129969_130842_-	UTP-glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	2.7e-60	44.6
NP_975121.1\|131050_131491_-	hypothetical protein	NA	NA	NA	NA
NP_975122.1\|131544_132321_+	hypothetical protein	NA	NA	NA	NA
NP_975123.1\|132384_133923_+	ABC transporter ATP-binding protein	A0A1V0SKJ1	Klosneuvirus	1.1e-53	29.3
NP_975124.1\|134935_136162_+	threonine dehydratase	A0A1W6JHY1	Lactococcus_phage	4.1e-14	27.3
NP_975125.1\|136379_137960_+	hypothetical protein	NA	NA	NA	NA
NP_975126.1\|137971_138832_+	hypothetical protein	NA	NA	NA	NA
NP_975127.1\|139107_139824_+	hypothetical protein	NA	NA	NA	NA
NP_975128.1\|140140_141556_+	hexosephosphate transport protein	NA	NA	NA	NA
NP_975129.1\|141826_141979_+	hypothetical protein	NA	NA	NA	NA
NP_975130.1\|144915_145407_-	prolipoprotein lppC	NA	NA	NA	NA
NP_975131.1\|145486_146899_-\|transposase	transposase ISMmy1E	NA	NA	NA	NA
NP_975132.1\|147458_147746_-	hypothetical protein	NA	NA	NA	NA
NP_975133.1\|148799_148916_+	hypothetical protein	NA	NA	NA	NA
NP_975134.3\|151265_152042_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
NP_975135.1\|152045_153719_+	PTS system-N-acetylglucosamine-specific transporter subunit IIBC	NA	NA	NA	NA
NP_975136.1\|153849_155301_+\|tRNA	glutamyl-tRNA synthetase	NA	NA	NA	NA
NP_975137.1\|155303_156518_+	hypothetical protein	E3T4P8	Cafeteria_roenbergensis_virus	3.3e-32	31.6
NP_975138.1\|156543_156972_+	hypothetical protein	NA	NA	NA	NA
NP_975139.1\|157062_158661_+	CTP synthetase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.2e-133	48.2
NP_975140.1\|158894_159857_+	hypothetical protein	NA	NA	NA	NA
NP_975141.1\|159871_160840_+	hypothetical protein	NA	NA	NA	NA
NP_975142.1\|160878_161739_-\|transposase	IS1296MP transposase protein B	A0A1B1P773	Bacillus_phage	1.2e-65	48.5
NP_975143.1\|161747_162290_-\|transposase	IS1296MP transposase protein A	NA	NA	NA	NA

DBSCAN-SWA_3

200976 : 266533

Bacillus_phage(11.76%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975175.1\|200976_202650_+\|transposase	IS1634BP transposase	NA	NA	NA	NA
NP_975176.1\|202676_203261_+\|transposase	IS1296UK transposase	NA	NA	NA	NA
NP_975177.1\|203269_204130_+\|transposase	IS1296UK transposase protein B	A0A1B1P773	Bacillus_phage	1.6e-65	48.5
NP_975178.1\|204170_205010_-	hypothetical protein	NA	NA	NA	NA
NP_975179.1\|205009_205615_-	hypothetical protein	NA	NA	NA	NA
NP_975180.1\|205815_207120_-	prolipoprotein C	NA	NA	NA	NA
NP_975181.1\|207225_209916_-\|tRNA	alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	7.1e-67	33.9
NP_975182.1\|209987_210482_-	hypothetical protein	NA	NA	NA	NA
NP_975183.1\|210698_211943_+	oligopeptide ABC transporter permease	NA	NA	NA	NA
NP_975184.1\|211958_212969_+	oligopeptide ABC transporter permease	NA	NA	NA	NA
NP_975185.1\|212982_214683_+	oligopeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.9e-10	43.4
NP_975186.1\|214672_216553_+	oligopeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-11	40.4
NP_975187.1\|216569_219713_+	oligopeptide ABC transporter substrate-binding protein	NA	NA	NA	NA
NP_975188.1\|219985_220579_+	restriction endonuclease	NA	NA	NA	NA
NP_975189.1\|220594_222583_+	DNA methylase	A0A0H3UZ66	Geobacillus_virus	6.2e-44	38.0
NP_975190.1\|222888_224055_+	hypothetical protein	NA	NA	NA	NA
NP_975191.1\|224112_224874_+	hypothetical protein	NA	NA	NA	NA
NP_975192.1\|224873_225335_+	hypothetical protein	NA	NA	NA	NA
NP_975193.1\|225416_225938_+	hypothetical protein	NA	NA	NA	NA
NP_975194.2\|225943_228388_+	transfer complex protein TrsE	NA	NA	NA	NA
NP_975195.1\|228515_229436_+	hypothetical protein	A0A1V0E025	Clostridioides_phage	1.6e-07	25.4
NP_975196.1\|229425_229566_+	hypothetical protein	NA	NA	NA	NA
NP_975197.1\|229714_230290_+	prophage protein	A0A0N9SGM1	Paenibacillus_phage	9.6e-22	43.6
NP_975198.1\|230813_231968_-	hypothetical protein	NA	NA	NA	NA
NP_975199.1\|232001_233288_-	hypothetical protein	NA	NA	NA	NA
NP_975200.1\|233535_235185_-	hypothetical protein	NA	NA	NA	NA
NP_975201.1\|235136_235820_-	hypothetical protein	NA	NA	NA	NA
NP_975202.1\|236187_236583_-	hypothetical protein	NA	NA	NA	NA
NP_975203.1\|236586_237255_-	adenine-specific DNA methyltransferase	A7YG95	Campylobacter_phage	1.7e-06	37.8
NP_975204.1\|237255_238059_-	hypothetical protein	NA	NA	NA	NA
NP_975205.1\|238137_238551_-	hypothetical protein	NA	NA	NA	NA
NP_975206.1\|238610_239321_-	hypothetical protein	NA	NA	NA	NA
NP_975207.1\|239554_239779_-	hypothetical protein	NA	NA	NA	NA
NP_975208.1\|239886_240468_-	hypothetical protein	NA	NA	NA	NA
NP_975209.1\|240604_240880_-	hypothetical protein	NA	NA	NA	NA
NP_975210.1\|241179_241524_-	hypothetical protein	NA	NA	NA	NA
NP_975211.1\|241597_242083_-	hypothetical protein	NA	NA	NA	NA
NP_975212.1\|242135_243428_-	prolipoprotein	NA	NA	NA	NA
NP_975213.1\|243482_243614_-	hypothetical protein	NA	NA	NA	NA
NP_975214.1\|244132_244993_-\|transposase	IS1296JI transposase protein B	A0A1B1P773	Bacillus_phage	1.2e-65	48.5
NP_975215.1\|246808_248662_+	elongation factor Tu family protein	A0A1S5SF82	Streptococcus_phage	1.6e-22	24.3
NP_975216.1\|248693_249458_-	type 2 site-specific deoxyribonuclease	NA	NA	NA	NA
NP_975217.1\|249450_250476_-	cytosine-specific DNA-methyltransferase	F2Y148	Organic_Lake_phycodnavirus	8.6e-82	47.0
NP_975218.1\|250468_251767_-	Sun family protein	NA	NA	NA	NA
NP_975219.1\|251729_252623_-	guanylate kinase	A0A0M5KCK5	Mollivirus	1.4e-11	33.1
NP_975220.1\|252625_253198_-	DNA methylase	NA	NA	NA	NA
NP_975221.1\|253256_253859_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.6e-06	33.0
NP_975222.1\|254048_254594_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	5.7e-08	29.7
NP_975223.1\|254619_254811_+	50S ribosomal protein L35	NA	NA	NA	NA
NP_975224.1\|254829_255195_+	50S ribosomal protein L20	NA	NA	NA	NA
NP_975225.1\|255559_256615_+	spermidine/putrescine ABC transporter ATP-binding component	Q6GZ03	Mycoplasma_phage	6.2e-35	38.2
NP_975226.1\|256614_257607_+	spermidine/putrescine ABC transporter permease	NA	NA	NA	NA
NP_975227.1\|257591_260720_+	spermidine/putrescine ABC transporter permease/substrate-binding protein	Q6GZ01	Mycoplasma_phage	1.4e-13	29.4
NP_975228.1\|261065_261320_-	hypothetical protein	NA	NA	NA	NA
NP_975229.1\|261364_262030_-	hypothetical protein	A0A0S2MYH0	Enterococcus_phage	1.3e-25	35.5
NP_975230.1\|263021_263285_-	chromate transporter	NA	NA	NA	NA
NP_975231.1\|263778_265191_+\|transposase	transposase ISMmy1B	NA	NA	NA	NA
NP_975232.1\|265990_266533_-\|transposase	IS1296PX transposase protein A	NA	NA	NA	NA

DBSCAN-SWA_4

643445 : 723280

Bodo_saltans_virus(22.22%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975552.1\|643445_644858_-\|transposase	transposase ISMmy1F	NA	NA	NA	NA
NP_975553.1\|645419_645590_+	hypothetical protein	NA	NA	NA	NA
NP_975554.1\|645905_646598_-	hypothetical protein	NA	NA	NA	NA
NP_975555.1\|646624_647341_-	hypothetical protein	NA	NA	NA	NA
NP_975556.1\|648467_649493_+	hypothetical protein	NA	NA	NA	NA
NP_975557.1\|650143_650767_-	hypothetical protein	NA	NA	NA	NA
NP_975558.1\|650815_651763_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
NP_975559.1\|651949_652282_-	holo-ACP synthase	NA	NA	NA	NA
NP_975560.1\|651953_652352_+	hypothetical protein	NA	NA	NA	NA
NP_975561.1\|653180_653351_-	hypothetical protein	NA	NA	NA	NA
NP_975562.1\|653424_653907_-	dCMP deaminase	A0A0M4K765	Mollivirus	1.0e-37	50.0
NP_975563.1\|653909_655220_-	hypothetical protein	NA	NA	NA	NA
NP_975564.1\|655203_656136_-	ribosomal large subunit pseudouridylate synthase D	A0A2H4UV25	Bodo_saltans_virus	1.0e-09	27.8
NP_975565.1\|656116_656725_-	lipoprotein signal peptidase	NA	NA	NA	NA
NP_975566.1\|656715_659463_-\|tRNA	isoleucyl-tRNA synthetase	A0A2I2L3Y0	Orpheovirus	1.5e-83	27.1
NP_975567.1\|660213_661203_-	hypothetical protein	NA	NA	NA	NA
NP_975568.1\|661215_661632_-	hypothetical protein	NA	NA	NA	NA
NP_975569.1\|661643_662804_-	cell division protein FtsZ	NA	NA	NA	NA
NP_975570.1\|662858_663839_-	hypothetical protein	NA	NA	NA	NA
NP_975571.1\|663844_664108_-	hypothetical protein	NA	NA	NA	NA
NP_975572.1\|664086_665013_-	S-adenosyl-methyltransferase MraW	NA	NA	NA	NA
NP_975573.1\|665021_665423_-	cell division protein MraZ	NA	NA	NA	NA
NP_975574.1\|665529_665709_-	50S ribosomal protein L32	NA	NA	NA	NA
NP_975575.1\|665723_666242_-	hypothetical protein	NA	NA	NA	NA
NP_975576.1\|666241_668626_-\|tRNA	phenylalanyl-tRNA synthetase subunit beta	NA	NA	NA	NA
NP_975577.1\|668634_669687_-\|tRNA	phenylalanyl-tRNA synthetase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	4.3e-20	36.2
NP_975578.1\|669715_670324_-	hypothetical protein	NA	NA	NA	NA
NP_975579.1\|670332_674781_-	hypothetical protein	NA	NA	NA	NA
NP_975580.1\|679944_681609_-\|tRNA	arginyl-tRNA synthetase	M1PAX3	Moumouvirus	2.8e-13	20.3
NP_975581.1\|681610_682159_-	ribosome recycling factor	NA	NA	NA	NA
NP_975582.1\|682408_682927_-	uridylate kinase	NA	NA	NA	NA
NP_975583.1\|683270_684944_+\|transposase	IS1634CA transposase	NA	NA	NA	NA
NP_975584.1\|686291_686498_-	hypothetical protein	NA	NA	NA	NA
NP_975585.1\|686875_688549_-\|transposase	IS1634BH transposase	NA	NA	NA	NA
NP_975586.1\|688851_689457_-	hypothetical protein	NA	NA	NA	NA
NP_975587.1\|689456_690344_-	elongation factor Ts	NA	NA	NA	NA
NP_975588.1\|690846_691233_-	30S ribosomal protein S2	NA	NA	NA	NA
NP_975589.1\|691438_692557_-	molecular chaperone DnaJ	A0A2P1ELC3	Moumouvirus	4.9e-22	28.2
NP_975590.1\|692620_694396_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	4.7e-128	46.5
NP_975591.1\|694451_695084_-	heat shock protein GrpE	NA	NA	NA	NA
NP_975592.1\|695055_696078_-	heat-inducible transcription repressor HrcA	NA	NA	NA	NA
NP_975593.1\|696082_698224_-\|protease	ATP dependent protease ClpB	K4FB40	Cronobacter_phage	2.3e-116	36.5
NP_975594.1\|698386_699274_-	HAD family hydrolase	NA	NA	NA	NA
NP_975595.1\|699252_699798_-	rRNA methylase	NA	NA	NA	NA
NP_975596.1\|699810_700413_-	Ham1 family protein	NA	NA	NA	NA
NP_975597.1\|700613_703112_+	prolipoprotein	NA	NA	NA	NA
NP_975598.1\|703167_704547_-	ATP synthase F0F1 subunit beta	NA	NA	NA	NA
NP_975599.1\|704546_706094_-	ATP synthase F0F1 subunit alpha	NA	NA	NA	NA
NP_975600.1\|706098_708411_-	hypothetical protein	NA	NA	NA	NA
NP_975601.1\|708412_708856_-	hypothetical protein	NA	NA	NA	NA
NP_975602.1\|708855_709767_-	hypothetical protein	NA	NA	NA	NA
NP_975603.1\|709768_710263_-	hypothetical protein	NA	NA	NA	NA
NP_975604.1\|710237_711701_-	hypothetical protein	NA	NA	NA	NA
NP_975605.1\|711731_714311_-	prolipoprotein	NA	NA	NA	NA
NP_975606.1\|714334_716587_-	hypothetical protein	NA	NA	NA	NA
NP_975607.1\|716859_719415_-	prolipoprotein	NA	NA	NA	NA
NP_975608.1\|719434_721687_-	hypothetical protein	NA	NA	NA	NA
NP_975609.1\|721853_722729_-\|transposase	IS1296LL transposase protein B	A0A1B1P773	Bacillus_phage	2.8e-65	48.1
NP_975610.1\|722737_723280_-\|transposase	IS1296LL transposase protein A	NA	NA	NA	NA

DBSCAN-SWA_5

756755 : 801234

Bacillus_phage(50.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975641.1\|756755_757298_+\|transposase	IS1296AB_B transposase protein A	NA	NA	NA	NA
NP_975642.1\|757306_758155_+\|transposase	IS1296AB_B transposase protein B	A0A1B1P773	Bacillus_phage	3.3e-63	48.0
NP_975643.1\|758353_759034_-	hypothetical protein	NA	NA	NA	NA
NP_975644.1\|759484_760708_-	hypothetical protein	NA	NA	NA	NA
NP_975645.1\|762511_763399_-	hypothetical protein	NA	NA	NA	NA
NP_975646.1\|763691_764915_-	hypothetical protein	NA	NA	NA	NA
NP_975647.1\|765279_765483_-	hypothetical protein	NA	NA	NA	NA
NP_975648.1\|765855_767688_+	hypothetical protein	NA	NA	NA	NA
NP_975649.1\|767762_768707_+	hypothetical protein	NA	NA	NA	NA
NP_975650.1\|768959_770633_-\|transposase	IS1634AS transposase	NA	NA	NA	NA
NP_975651.1\|771517_772060_-\|transposase	IS1296QT transposase protein A	NA	NA	NA	NA
NP_975652.1\|772372_772678_-	hypothetical protein	NA	NA	NA	NA
NP_975653.1\|772694_775313_-	hypothetical protein	NA	NA	NA	NA
NP_975654.1\|775372_775876_-	hypothetical protein	NA	NA	NA	NA
NP_975655.1\|776052_777267_-	phosphoglycerate kinase	NA	NA	NA	NA
NP_975656.1\|777381_778398_-	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
NP_975657.1\|778501_779440_-	primosomal protein	NA	NA	NA	NA
NP_975658.1\|779449_780634_-	replicative DNA helicase	NA	NA	NA	NA
NP_975659.1\|780790_781615_-	formamidopyrimidine-DNA glycosylase	A0A127AWE5	Bacillus_phage	1.6e-14	25.3
NP_975660.1\|781625_784361_-	DNA polymerase I	F8WQ35	Bacillus_phage	1.9e-43	31.0
NP_975661.1\|784369_787333_-	DNA polymerase III subunit alpha	A0A291AVZ2	Streptomyces_phage	7.3e-89	31.5
NP_975662.1\|787642_789316_-\|transposase	IS1634BL transposase	NA	NA	NA	NA
NP_975663.1\|789487_790732_-\|tRNA	tyrosine-tRNA ligase	K4F5T3	Cronobacter_phage	4.7e-74	39.4
NP_975664.1\|790740_791829_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
NP_975665.1\|791779_792412_-\|tRNA	phenylalanine-tRNA ligase	NA	NA	NA	NA
NP_975666.1\|792462_793302_+	hypothetical protein	NA	NA	NA	NA
NP_975667.1\|793285_794164_+	hypothetical protein	NA	NA	NA	NA
NP_975668.1\|794463_794928_-	ferric uptake regulator	NA	NA	NA	NA
NP_975669.1\|794928_795150_-	hypothetical protein	NA	NA	NA	NA
NP_975670.1\|795173_795536_-	prolipoprotein	NA	NA	NA	NA
NP_975671.1\|795522_795660_-	hypothetical protein	NA	NA	NA	NA
NP_975672.1\|796331_796604_-	hypothetical protein	NA	NA	NA	NA
NP_975673.1\|797084_798980_+	endopeptidase O	E3T4I7	Cafeteria_roenbergensis_virus	1.6e-65	30.6
NP_975674.1\|799710_801234_+\|transposase	IS1634BM transposase	NA	NA	NA	NA

DBSCAN-SWA_6

856212 : 914053

Planktothrix_phage(40.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975737.1\|856212_857685_-\|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit B	NA	NA	NA	NA
NP_975738.1\|857653_859111_-\|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit A	NA	NA	NA	NA
NP_975739.1\|859110_859407_-\|tRNA	glutamyl-tRNA(Gln) amidotransferase subunit C	NA	NA	NA	NA
NP_975740.1\|859408_861415_-	DNA ligase	A0A0K2QQN8	Ralstonia_phage	1.5e-101	35.1
NP_975741.1\|861418_863440_-	hypothetical protein	NA	NA	NA	NA
NP_975742.1\|863442_864351_-	RNA pseudouridylate synthase	NA	NA	NA	NA
NP_975743.1\|864353_865322_-	hypothetical protein	NA	NA	NA	NA
NP_975744.1\|865378_865648_-	phosphocarrier protein HPr	NA	NA	NA	NA
NP_975745.1\|865712_867881_-	ATP-dependent DNA helicase	A7KV33	Bacillus_phage	1.2e-93	34.9
NP_975746.1\|867897_868653_-	hypothetical protein	NA	NA	NA	NA
NP_975747.1\|868652_869609_-	glycosyltransferase	NA	NA	NA	NA
NP_975748.1\|869897_870215_-	hypothetical protein	NA	NA	NA	NA
NP_975749.1\|870220_870754_-	hypothetical protein	NA	NA	NA	NA
NP_975750.1\|871087_872017_-	peptide methionine sulfoxide reductase	NA	NA	NA	NA
NP_975751.1\|872131_874315_-	prolipoprotein	NA	NA	NA	NA
NP_975752.1\|874562_876911_-	prolipoprotein	NA	NA	NA	NA
NP_975753.1\|876919_877822_-	hypothetical protein	NA	NA	NA	NA
NP_975754.1\|878256_879801_-	hypothetical protein	NA	NA	NA	NA
NP_975755.1\|879803_880382_-	hypothetical protein	NA	NA	NA	NA
NP_975756.1\|880384_881239_-	DNA methyltransferase	O80242	Mycoplasma_phage	4.1e-77	60.3
NP_975757.1\|881301_882387_-\|transposase	transposase ISMmy1D	NA	NA	NA	NA
NP_975758.1\|883459_885352_-	prolipoprotein	NA	NA	NA	NA
NP_975759.1\|885363_885522_-	hypothetical protein	NA	NA	NA	NA
NP_975760.1\|885638_886262_-	hypothetical protein	NA	NA	NA	NA
NP_975761.1\|886377_888051_+\|transposase	IS1634AM transposase	NA	NA	NA	NA
NP_975762.1\|889735_891568_-	alkylphosphonate ABC transporter permease	NA	NA	NA	NA
NP_975763.1\|891531_892281_-	alkylphosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.1e-13	31.4
NP_975764.1\|892291_893764_-	alkylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
NP_975765.1\|893978_894245_+	hypothetical protein	NA	NA	NA	NA
NP_975766.1\|893986_894130_-	hypothetical protein	NA	NA	NA	NA
NP_975767.1\|894324_894849_-	hypothetical protein	NA	NA	NA	NA
NP_975768.1\|894980_896171_+	aminotransferase	NA	NA	NA	NA
NP_975769.1\|896180_896582_+	translation initiation inhibitor	NA	NA	NA	NA
NP_975770.1\|896701_898147_-\|transposase	transposase ISMmy1G	NA	NA	NA	NA
NP_975771.1\|898541_900215_-\|transposase	IS1634AU transposase	NA	NA	NA	NA
NP_975772.1\|900804_902844_-	prolipoprotein	NA	NA	NA	NA
NP_975773.1\|902855_903014_-	hypothetical protein	NA	NA	NA	NA
NP_975774.1\|903130_903754_-	hypothetical protein	NA	NA	NA	NA
NP_975775.1\|904928_905600_-	ABC transporter permease	NA	NA	NA	NA
NP_975776.1\|905711_907385_-\|transposase	IS1634AY transposase	NA	NA	NA	NA
NP_975777.1\|907508_908258_-	alkylphosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.1e-13	31.4
NP_975778.1\|908268_909702_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
NP_975779.1\|909924_910788_-	HAD superfamily hydrolase	NA	NA	NA	NA
NP_975780.1\|910919_912110_+	aminotransferase	NA	NA	NA	NA
NP_975781.1\|912119_912521_+	translation initiation inhibitor	NA	NA	NA	NA
NP_975782.1\|912640_914053_-\|transposase	transposase ISMmy1C	NA	NA	NA	NA

DBSCAN-SWA_7

922862 : 993531

Bacillus_phage(15.38%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975787.1\|922862_924536_+\|transposase	IS1634CHBZ transposase	NA	NA	NA	NA
NP_975788.1\|924666_926106_-	hypothetical protein	NA	NA	NA	NA
NP_975789.1\|926530_927748_-	hypothetical protein	NA	NA	NA	NA
NP_975790.1\|929169_929394_-	hypothetical protein	NA	NA	NA	NA
NP_975791.1\|929595_931038_-	hypothetical protein	NA	NA	NA	NA
NP_975792.1\|931179_931434_+	hypothetical protein	NA	NA	NA	NA
NP_975793.1\|931630_932329_+	hypothetical protein	NA	NA	NA	NA
NP_975794.1\|933482_934217_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
NP_975795.1\|934366_936040_+\|transposase	IS1634CI transposase	NA	NA	NA	NA
NP_975796.1\|936230_936977_+	triosephosphate isomerase	NA	NA	NA	NA
NP_975797.1\|936969_937806_+	HAD family hydrolase	NA	NA	NA	NA
NP_975798.1\|937808_939404_+	phosphoglyceromutase	NA	NA	NA	NA
NP_975799.1\|939501_940110_+	hypothetical protein	NA	NA	NA	NA
NP_975800.1\|940806_941103_+	hypothetical protein	NA	NA	NA	NA
NP_975801.1\|941245_941836_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
NP_975802.1\|941847_943524_-	phosphoglucomutase or phosphomannomutase	A0A1X9I671	Streptococcus_phage	5.3e-97	35.4
NP_975803.1\|943685_944999_+	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	8.4e-106	47.2
NP_975804.1\|945075_947112_-	PTS system-fructose-specific transporter subunit IIBC	NA	NA	NA	NA
NP_975805.1\|947114_948050_-	1-phosphofructokinase	NA	NA	NA	NA
NP_975806.1\|948049_948748_-	transcription repressor of fructose operon	NA	NA	NA	NA
NP_975807.1\|948899_949880_+	hypothetical protein	NA	NA	NA	NA
NP_975808.1\|950082_950736_+	purine nucleoside phosphorylase	NA	NA	NA	NA
NP_975809.1\|951301_952207_-	lysophospholipase	A7XCB7	Tanapox_virus	6.2e-15	27.9
NP_975810.1\|952587_953160_+	cell filamentation protein Fic	NA	NA	NA	NA
NP_975811.1\|953535_954630_-	hypothetical protein	NA	NA	NA	NA
NP_975812.1\|954622_956059_-	beta-glucosidase	NA	NA	NA	NA
NP_975813.1\|956003_956897_-	ROK family sugar kinase	NA	NA	NA	NA
NP_975814.1\|956883_957342_-	PTS system-fructose-specific transporter subunit IIA	NA	NA	NA	NA
NP_975815.1\|958258_959119_+\|transposase	IS1296HV transposase protein B	A0A1B1P773	Bacillus_phage	1.1e-64	47.7
NP_975816.1\|959126_961505_-	glycosyl hydrolase family protein	NA	NA	NA	NA
NP_975817.1\|961516_963358_-	PTS system-fructose-specific transporter subunit IIBC	NA	NA	NA	NA
NP_975818.1\|963372_964146_-	hypothetical protein	NA	NA	NA	NA
NP_975819.1\|964306_964858_-	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA
NP_975820.1\|964893_966201_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	5.6e-17	30.2
NP_975821.1\|966184_967483_-	adenylosuccinate synthetase	L7Y4J5	Megavirus	2.1e-56	34.4
NP_975822.1\|967677_968220_+\|transposase	IS1296GZ transposase protein A	NA	NA	NA	NA
NP_975823.1\|969186_971358_-	ribonucleotide-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	2.8e-162	44.2
NP_975824.1\|971335_971809_-	ribonucleotide reductase stimulatory protein	R4JF54	Bacillus_phage	7.9e-14	35.0
NP_975825.1\|971817_972837_-	ribonucleotide-diphosphate reductase subunit beta	B5LJM6	Mycobacterium_phage	1.9e-97	53.7
NP_975826.1\|973458_975573_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.9e-59	32.2
NP_975827.1\|975582_976029_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.1e-20	37.8
NP_975828.1\|976028_976511_+	hypothetical protein	NA	NA	NA	NA
NP_975829.1\|976698_978372_+\|transposase	IS1634AL transposase	NA	NA	NA	NA
NP_975830.1\|978816_980847_+	PTS system-glucose-specific transporter subunit IIBC	A0A2I7SAJ6	Vibrio_phage	8.7e-09	45.5
NP_975831.1\|981110_982085_+	hypothetical protein	NA	NA	NA	NA
NP_975832.1\|982421_984095_-\|transposase	IS1634AX transposase	NA	NA	NA	NA
NP_975833.1\|984306_985092_+	glucokinase	NA	NA	NA	NA
NP_975834.1\|985159_986092_-	carbamate kinase	NA	NA	NA	NA
NP_975835.1\|986104_986428_-	membrane arginine transporter	NA	NA	NA	NA
NP_975836.1\|986471_986636_-	hypothetical protein	NA	NA	NA	NA
NP_975837.1\|986724_986970_-	hypothetical protein	NA	NA	NA	NA
NP_975838.1\|987495_990324_-	P-type Mg(2+) transport ATPase	M1HX51	Paramecium_bursaria_Chlorella_virus	1.7e-42	25.3
NP_975839.1\|990605_991355_+	hypothetical protein	NA	NA	NA	NA
NP_975840.1\|991406_991817_+	hypothetical protein	NA	NA	NA	NA
NP_975841.1\|991857_993531_-\|transposase	IS1634CE transposase	NA	NA	NA	NA

DBSCAN-SWA_8

998604 : 1061119

Bacillus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975846.1\|998604_1000278_-\|transposase	IS1634AZ transposase	NA	NA	NA	NA
NP_975847.1\|1000369_1001275_-	carbamate kinase	NA	NA	NA	NA
NP_975848.1\|1001287_1001611_-	membrane arginine transporter	NA	NA	NA	NA
NP_975849.1\|1001654_1001819_-	hypothetical protein	NA	NA	NA	NA
NP_975850.1\|1001907_1002153_-	hypothetical protein	NA	NA	NA	NA
NP_975851.1\|1003570_1005505_-	magnesium ABC transporter ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	2.9e-22	24.5
NP_975852.1\|1005778_1006990_+	hypothetical protein	NA	NA	NA	NA
NP_975853.1\|1008926_1009226_-	ATP synthase subunit epsilon	NA	NA	NA	NA
NP_975854.1\|1009225_1010653_-	ATP synthase F0F1 subunit beta	NA	NA	NA	NA
NP_975855.1\|1010661_1011504_-	ATP synthase F0F1 subunit gamma	NA	NA	NA	NA
NP_975856.1\|1011505_1013083_-	ATP synthase F0F1 subunit alpha	NA	NA	NA	NA
NP_975857.1\|1013094_1013640_-	ATP synthase F0F1 subunit delta	NA	NA	NA	NA
NP_975858.1\|1013641_1014187_-	ATP synthase subunit B	NA	NA	NA	NA
NP_975859.1\|1014215_1014521_-	ATP synthase subunit C	NA	NA	NA	NA
NP_975860.1\|1014550_1015414_-	ATP synthase F0F1 subunit A	NA	NA	NA	NA
NP_975861.1\|1015431_1015812_-	hypothetical protein	NA	NA	NA	NA
NP_975862.1\|1015952_1016636_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
NP_975863.1\|1016675_1017917_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	6.1e-98	51.3
NP_975864.1\|1017900_1018398_-	ribose 5-phosphate isomerase RpiB	NA	NA	NA	NA
NP_975865.1\|1018422_1018719_+	hypothetical protein	NA	NA	NA	NA
NP_975866.1\|1018727_1020914_-	prolipoprotein	NA	NA	NA	NA
NP_975867.1\|1021034_1021577_+\|transposase	IS1296AC_R transposase protein A	NA	NA	NA	NA
NP_975868.1\|1021585_1022446_+\|transposase	IS1296AC_R transposase protein B	A0A1B1P773	Bacillus_phage	1.2e-65	48.5
NP_975869.1\|1022484_1023390_-	hypothetical protein	NA	NA	NA	NA
NP_975870.1\|1023467_1024430_-	hypothetical protein	NA	NA	NA	NA
NP_975871.1\|1024665_1025316_-	CTP synthetase	A0A1J0FA14	Only_Syngen_Nebraska_virus	5.0e-43	48.4
NP_975872.1\|1025395_1026802_+	hexose phosphate transport protein	NA	NA	NA	NA
NP_975873.1\|1026852_1027713_-\|transposase	IS1296DS transposase protein B	A0A1B1P773	Bacillus_phage	3.1e-64	47.7
NP_975874.1\|1027721_1028264_-\|transposase	IS1296DS transposase protein A	NA	NA	NA	NA
NP_975875.1\|1028604_1029618_+	hypothetical protein	NA	NA	NA	NA
NP_975876.1\|1029535_1032268_+	P-type Mg(2+) transport ATPase	M1HI01	Paramecium_bursaria_Chlorella_virus	1.0e-36	25.4
NP_975877.1\|1032326_1033865_+	amino acid permease	NA	NA	NA	NA
NP_975878.1\|1033836_1034517_+	hypothetical protein	NA	NA	NA	NA
NP_975879.1\|1034662_1036243_+	amino acid permease	NA	NA	NA	NA
NP_975880.1\|1036322_1036943_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
NP_975881.1\|1036942_1037356_+	glucose-inhibited division protein B	NA	NA	NA	NA
NP_975882.1\|1037638_1037839_+	hypothetical protein	NA	NA	NA	NA
NP_975883.1\|1037874_1038969_+	GTP-dependent nucleic acid-binding protein EngD	NA	NA	NA	NA
NP_975884.1\|1038934_1039648_+	hypothetical protein	NA	NA	NA	NA
NP_975885.1\|1039716_1041483_+	hypothetical protein	NA	NA	NA	NA
NP_975886.1\|1043457_1043748_+	hypothetical protein	NA	NA	NA	NA
NP_975887.1\|1043856_1045320_+	hypothetical protein	NA	NA	NA	NA
NP_975888.1\|1045426_1045717_+	hypothetical protein	NA	NA	NA	NA
NP_975889.1\|1045725_1047315_-\|transposase	IS1634CD transposase	NA	NA	NA	NA
NP_975890.1\|1047691_1048894_+	prolipoprotein	NA	NA	NA	NA
NP_975891.1\|1048880_1049711_+	hypothetical protein	NA	NA	NA	NA
NP_975892.1\|1049667_1050600_+	hypothetical protein	NA	NA	NA	NA
NP_975893.1\|1050678_1051179_+	hypothetical protein	NA	NA	NA	NA
NP_975894.1\|1051156_1051369_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
NP_975895.1\|1051861_1052236_+	hypothetical protein	NA	NA	NA	NA
NP_975896.1\|1052752_1052887_+	hypothetical protein	NA	NA	NA	NA
NP_975897.1\|1052861_1053002_+	hypothetical protein	NA	NA	NA	NA
NP_975898.1\|1055841_1057773_-	DNA topoisomerase I	A0A1V0SCS0	Indivirus	5.3e-64	31.1
NP_975899.1\|1058019_1058775_+	hypothetical protein	NA	NA	NA	NA
NP_975900.1\|1058814_1059114_-	hypothetical protein	NA	NA	NA	NA
NP_975901.1\|1059445_1061119_-\|transposase	IS1634BY transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1082968 : 1156758

Mycoplasma_phage(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
NP_975921.1\|1082968_1083529_+\|tRNA	peptidyl-tRNA hydrolase	NA	NA	NA	NA
NP_975922.1\|1083640_1084111_+	50S ribosomal protein L9	NA	NA	NA	NA
NP_975923.1\|1084095_1085412_+	replicative DNA helicase DnaC	A0A1P8VVQ6	Streptococcus_phage	1.4e-71	38.3
NP_975924.1\|1085478_1086780_+	prolipoprotein	NA	NA	NA	NA
NP_975925.1\|1086922_1087849_+	hypothetical protein	NA	NA	NA	NA
NP_975926.1\|1087857_1089183_+\|tRNA	cysteinyl-tRNA synthetase	M1PG92	Moumouvirus	1.9e-52	34.6
NP_975927.1\|1089184_1089919_+	rRNA methylase	NA	NA	NA	NA
NP_975928.1\|1090140_1090455_+	hypothetical protein	NA	NA	NA	NA
NP_975929.1\|1090471_1091113_+	transcription antitermination protein NUSG	NA	NA	NA	NA
NP_975930.1\|1091552_1097471_+	hypothetical protein	NA	NA	NA	NA
NP_975931.1\|1097480_1100438_+	oligopeptide ABC transporter substrate-binding protein	NA	NA	NA	NA
NP_975932.1\|1100437_1101511_+	oligopeptide ABC transporter permease	NA	NA	NA	NA
NP_975933.1\|1101512_1102523_+	oligopeptide ABC transporter permease	NA	NA	NA	NA
NP_975934.1\|1102530_1103976_+	oligopeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-13	29.7
NP_975935.1\|1103968_1105303_+	oligopeptide ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.0e-05	25.2
NP_975936.1\|1105432_1107106_-\|transposase	IS1634BQ transposase	NA	NA	NA	NA
NP_975937.1\|1107495_1108422_-	UDP-galactopyranose mutase	NA	NA	NA	NA
NP_975938.1\|1108434_1109439_-	UDP-glucose 4-epimerase	A0A1V0SG19	Hokovirus	1.2e-48	35.2
NP_975939.1\|1109811_1109958_+	hypothetical protein	NA	NA	NA	NA
NP_975940.1\|1109939_1111088_+	glycosyltransferase	NA	NA	NA	NA
NP_975941.1\|1111140_1111941_-	glycosyltransferase	NA	NA	NA	NA
NP_975942.1\|1112072_1113035_+	oligopeptide ABC transporter permease	Q6GZ03	Mycoplasma_phage	7.2e-06	25.2
NP_975943.1\|1113134_1114808_-\|transposase	IS1634BN transposase	NA	NA	NA	NA
NP_975944.1\|1115277_1116204_-	UDP-galactopuranose mutase	NA	NA	NA	NA
NP_975945.1\|1116216_1117221_-	UDP-glucose 4-epimerase	A0A1V0SG19	Hokovirus	1.2e-48	35.2
NP_975946.1\|1117523_1117742_+	hypothetical protein	NA	NA	NA	NA
NP_975947.1\|1117723_1118872_+	glycosyltransferase	NA	NA	NA	NA
NP_975948.1\|1119051_1120725_+\|transposase	IS1634AV transposase	NA	NA	NA	NA
NP_975949.1\|1120794_1121610_-	glycosyltransferase	NA	NA	NA	NA
NP_975950.1\|1121741_1122701_+	oligopeptide ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	5.5e-06	25.2
NP_975951.1\|1122740_1123928_-	UDP-galactopyranose mutase	NA	NA	NA	NA
NP_975952.1\|1124312_1124945_-	UDP-glucose 4-epimerase	A0A1V0SG19	Hokovirus	3.3e-23	36.1
NP_975953.1\|1125247_1125466_+	hypothetical protein	NA	NA	NA	NA
NP_975954.1\|1125447_1126596_+	glycosyltransferase	NA	NA	NA	NA
NP_975955.1\|1126648_1127563_-	glycosyltransferase	NA	NA	NA	NA
NP_975956.1\|1128033_1129707_-\|transposase	IS1634CB transposase	NA	NA	NA	NA
NP_975957.1\|1129932_1130805_-	UTP-glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	5.1e-59	44.2
NP_975958.1\|1131014_1131173_-	hypothetical protein	NA	NA	NA	NA
NP_975959.1\|1131211_1131553_-	hypothetical protein	NA	NA	NA	NA
NP_975960.1\|1131802_1133176_+	glycosyltransferase	NA	NA	NA	NA
NP_975961.1\|1133533_1133962_+	50S ribosomal protein L11	NA	NA	NA	NA
NP_975962.1\|1133961_1134642_+	50S ribosomal protein L1	NA	NA	NA	NA
NP_975963.1\|1135004_1135178_+	hypothetical protein	NA	NA	NA	NA
NP_975964.1\|1135300_1136275_+	transglutaminase	NA	NA	NA	NA
NP_975965.1\|1136431_1137118_+	hypothetical protein	NA	NA	NA	NA
NP_975966.1\|1138792_1138999_+	prolipoprotein	NA	NA	NA	NA
NP_975967.1\|1138828_1139065_-	hypothetical protein	NA	NA	NA	NA
NP_975968.1\|1139674_1141348_+\|transposase	IS1634BG transposase	NA	NA	NA	NA
NP_975969.1\|1141849_1142335_+	hypothetical protein	NA	NA	NA	NA
NP_975970.1\|1143004_1144240_+	hypothetical protein	NA	NA	NA	NA
NP_975971.1\|1144561_1145059_+	50S ribosomal protein L10	NA	NA	NA	NA
NP_975972.1\|1145127_1145496_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
NP_975973.1\|1146831_1150707_+	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	1.9e-49	26.4
NP_975974.1\|1150718_1154486_+	DNA-directed RNA polymerase subunit beta	A0A0N9QZ01	Chrysochromulina_ericina_virus	7.6e-59	25.7
NP_975975.1\|1155084_1156758_+\|transposase	IS1634BX transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_005364

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection