CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_007483	Nitrosococcus oceani ATCC 19707 plasmid A, complete sequence	0 crisprs	NA	0	0	5	0
NC_007484	Nitrosococcus oceani ATCC 19707, complete sequence	1 crisprs	c2c9_V-U4,cas14j,DEDDh,WYL,c2c10_CAS-V-U3,DinG,cas3,Cas14u_CAS-V,cas3f,cas1,cas8f,cas5f,cas7f,cas6f	0	4	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 1080

Pectobacterium_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011330185.1\|279_1080_-	DUF945 domain-containing protein	A0A1L2CVW9	Pectobacterium_phage	4.9e-32	32.3

DBSCAN-SWA_2

9855 : 18974

Brevibacillus_phage(20.0%)

integrase

attL 10229:10243|attR 23681:23695

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004164099.1\|9855_10629_+	ParA family protein	A0A0K2FLP4	Brevibacillus_phage	9.3e-20	33.6
10229:10243	attL	NA	NA	NA	NA
WP_004164060.1\|10621_11476_+	ParB/RepB/Spo0J family partition protein	S5VTK0	Leptospira_phage	5.8e-15	31.8
WP_004164087.1\|12193_13126_+\|integrase	tyrosine-type recombinase/integrase	A0A1B1IQT7	uncultured_Mediterranean_phage	5.4e-14	33.8
WP_004164093.1\|13207_13576_-	hypothetical protein	NA	NA	NA	NA
WP_004164090.1\|13794_14664_+	hypothetical protein	NA	NA	NA	NA
WP_011330187.1\|14969_15236_+	hypothetical protein	NA	NA	NA	NA
WP_004164086.1\|15292_16756_+	YdiU family protein	A0A075BSJ0	Microcystis_phage	8.9e-48	30.7
WP_004164079.1\|16959_18171_-	hypothetical protein	NA	NA	NA	NA
WP_004164081.1\|18404_18974_-	recombinase family protein	A0A1S6L009	Salmonella_phage	8.8e-44	60.5
23681:23695	attR	NA	NA	NA	NA

DBSCAN-SWA_3

24007 : 26758

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002814337.1\|24007_26758_+	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	2.2e-156	37.3

DBSCAN-SWA_4

30792 : 31803

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011330193.1\|30792_31803_-	Abi family protein	A0A059NT88	Lactococcus_phage	6.2e-08	20.1

DBSCAN-SWA_5

39091 : 39592

Lactobacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011330197.1\|39091_39592_-	siphovirus Gp157 family protein	A0A0A1EL06	Lactobacillus_phage	2.0e-15	31.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_007484

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CRISPR-Cas detection and classification

Crispr_ID: NC_007484_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007484_1

3128058-3128445

TypeV,TypeI-F

I-F

Consensus_repeat	Method
GTTCACCGCCGCACAGGCGGTTTAGAAA	PILER-CR
GTTCACCGCCGCACAGGCGGTTTAGAAA	CRISPRCasFinder
GTTCACCGCCGCACAGGCGGTTTAGAAA	CRT

6 spacers

cas6f,cas7f,cas5f,cas8f,cas1,cas3f,cas14j

The CRISPR arrays of NC_007484_1

>merge|NC_007484|1|3128058-3128445|PILER-CR,CRISPRCasFinder,CRT
GTTCACCGCCGCACAGGCGGTTTAGAAATACCAAGTACATCAATATCTCTGGAGTTATTTGTTCACCGCCGCACAGGCGGTTTAGAAATAGACAGCATTCTGAGCTGGGCGGTGGCGGTAGTTCACCGCCGCACAGGCGGTTTAGAAAAATTTAAAAAGAACAGAAGTCCCGTGTTATCGGTTCACCGCCGCACAGGCGGTTTAGAAAACCTACTCACCAAAGATTGGGGTTTATCTATCGTTCACCGCCGCACAGGCGGTTTAGAAAACCCTGGGGCTAGGCTTGGAAGTCAAGCGCGTGTTCACCGCCGCACAGGCGGTTTAGAAAGCTATAAAAGTTAATTAGTGAGAAAAGGGGATGTTCACCGCCGCACAGGCGGTTTAGAAA

>NC_007484|1|1|3128058-3128445|PILER-CR
GTTCACCGCCGCACAGGCGGTTTAGAAA	TACCAAGTACATCAATATCTCTGGAGTTATTT
GTTCACCGCCGCACAGGCGGTTTAGAAA	TAGACAGCATTCTGAGCTGGGCGGTGGCGGTA
GTTCACCGCCGCACAGGCGGTTTAGAAA	AATTTAAAAAGAACAGAAGTCCCGTGTTATCG
GTTCACCGCCGCACAGGCGGTTTAGAAA	ACCTACTCACCAAAGATTGGGGTTTATCTATC
GTTCACCGCCGCACAGGCGGTTTAGAAA	ACCCTGGGGCTAGGCTTGGAAGTCAAGCGCGT
GTTCACCGCCGCACAGGCGGTTTAGAAA	GCTATAAAAGTTAATTAGTGAGAAAAGGGGAT
GTTCACCGCCGCACAGGCGGTTTAGAAA

>NC_007484|1|1|3128058-3128445|CRISPRCasFinder
GTTCACCGCCGCACAGGCGGTTTAGAAA	TACCAAGTACATCAATATCTCTGGAGTTATTT
GTTCACCGCCGCACAGGCGGTTTAGAAA	TAGACAGCATTCTGAGCTGGGCGGTGGCGGTA
GTTCACCGCCGCACAGGCGGTTTAGAAA	AATTTAAAAAGAACAGAAGTCCCGTGTTATCG
GTTCACCGCCGCACAGGCGGTTTAGAAA	ACCTACTCACCAAAGATTGGGGTTTATCTATC
GTTCACCGCCGCACAGGCGGTTTAGAAA	ACCCTGGGGCTAGGCTTGGAAGTCAAGCGCGT
GTTCACCGCCGCACAGGCGGTTTAGAAA	GCTATAAAAGTTAATTAGTGAGAAAAGGGGAT
GTTCACCGCCGCACAGGCGGTTTAGAAA

>NC_007484|1|1|3128058-3128445|CRT
GTTCACCGCCGCACAGGCGGTTTAGAAA	TACCAAGTACATCAATATCTCTGGAGTTATTT
GTTCACCGCCGCACAGGCGGTTTAGAAA	TAGACAGCATTCTGAGCTGGGCGGTGGCGGTA
GTTCACCGCCGCACAGGCGGTTTAGAAA	AATTTAAAAAGAACAGAAGTCCCGTGTTATCG
GTTCACCGCCGCACAGGCGGTTTAGAAA	ACCTACTCACCAAAGATTGGGGTTTATCTATC
GTTCACCGCCGCACAGGCGGTTTAGAAA	ACCCTGGGGCTAGGCTTGGAAGTCAAGCGCGT
GTTCACCGCCGCACAGGCGGTTTAGAAA	GCTATAAAAGTTAATTAGTGAGAAAAGGGGAT
GTTCACCGCCGCACAGGCGGTTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_007484.1\|WP_002813888.1\|3140258_3141542_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NC_007484.1\|WP_002814020.1\|3126232_3127306_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09737_cas7f_CAS-I-F	gnl\|CDD\|378222
NC_007484.1\|WP_002812901.1\|3118352_3119210_+\|DUF4743-domain-containing-protein	unknown	unknown	gnl\|CDD\|178432
NC_007484.1\|WP_002811971.1\|3132208_3132616_+\|Hg(II)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|184302
NC_007484.1\|WP_168023436.1\|3114842_3116519_-\|MtrB/PioB-family-outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|371763
NC_007484.1\|WP_002813332.1\|3131841_3132102_-\|mercury-resistance-system-transport-protein-MerF	unknown	unknown	gnl\|CDD\|371528
NC_007484.1\|WP_002814225.1\|3113805_3114249_-\|hypothetical-protein	unknown	unknown	unknown
NC_007484.1\|WP_002811940.1\|3125280_3126210_+\|CRISPR-associated-protein-Csy2	cas5f	cd09736_cas5f_CAS-I-F	gnl\|CDD\|187867
NC_007484.1\|WP_002812358.1\|3123931_3125284_+\|hypothetical-protein	cas8f	cls000148_cas8f_CAS-I-F	gnl\|CDD\|378220
NC_007484.1\|WP_002814171.1\|3135176_3135479_+\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|274228
NC_007484.1\|WP_002814278.1\|3119233_3122734_-\|hypothetical-protein	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NC_007484.1\|WP_002814243.1\|3134885_3135164_+\|plasmid-maintenance-system-killer-protein	unknown	unknown	gnl\|CDD\|226079
NC_007484.1\|WP_002812363.1\|3130445_3131852_-\|mercury(II)-reductase	unknown	unknown	gnl\|CDD\|237790
NC_007484.1\|WP_002814158.1\|3135928_3138184_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|315987
NC_007484.1\|WP_011331056.1\|3128882_3130355_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238020
NC_007484.1\|WP_002812282.1\|3138260_3139313_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|378704
NC_007484.1\|WP_002812325.1\|3127320_3127926_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NC_007484.1\|WP_002813084.1\|3122730_3123618_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
NC_007484.1\|WP_002813328.1\|3116437_3117280_-\|MtrB/PioB-family-outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|371763
NC_007484.1\|WP_002812288.1\|3139656_3140121_-\|extradiol-dioxygenase	unknown	unknown	gnl\|CDD\|319908

Protein	Function_ID	Function_description	E-value
NC_007484.1\|WP_002813888.1\|3140258_3141542_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.69969e-52
NC_007484.1\|WP_002814020.1\|3126232_3127306_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	2.0155e-153
NC_007484.1\|WP_002812363.1\|3130445_3131852_-\|mercury(II)-reductase	gnl\|CDD\|237790	PRK14694, PRK14694, putative mercuric reductase; Provisional.	0
NC_007484.1\|WP_002811971.1\|3132208_3132616_+\|Hg(II)-responsive-transcriptional-regulator	gnl\|CDD\|184302	PRK13752, PRK13752, mercuric resistance operon transcriptional regulator MerR.	9.41376e-72
NC_007484.1\|WP_168023436.1\|3114842_3116519_-\|MtrB/PioB-family-outer-membrane-beta-barrel-protein	gnl\|CDD\|371763	pfam11854, MtrB_PioB, Putative outer membrane beta-barrel porin, MtrB/PioB. MtrB-PioB is a family of bacterial putative outer membrane porins. This family, is secreted as part of the pio (phototrophic iron oxidation) operon that has been found to couple the oxidation of ferrous iron [Fe(II)] to reductive CO2 fixation using light energy. PioABC is found in Rhodopseudomonas palustris and MtrB-PioB is likely to be a beta-barrel porin. Similar to other outer membrane porins, PioB and MtrB are predicted to have long loops protruding into the extracellular space and short turns on the periplasmic side.	2.37973e-116
NC_007484.1\|WP_002812901.1\|3118352_3119210_+\|DUF4743-domain-containing-protein	gnl\|CDD\|178432	PLN02839, PLN02839, nudix hydrolase.	2.45025e-83
NC_007484.1\|WP_002811940.1\|3125280_3126210_+\|CRISPR-associated-protein-Csy2	gnl\|CDD\|187867	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	1.33412e-81
NC_007484.1\|WP_002812358.1\|3123931_3125284_+\|hypothetical-protein	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	3.12857e-07
NC_007484.1\|WP_002814171.1\|3135176_3135479_+\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	2.46533e-33
NC_007484.1\|WP_002814278.1\|3119233_3122734_-\|hypothetical-protein	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	1.62915e-141
NC_007484.1\|WP_002814243.1\|3134885_3135164_+\|plasmid-maintenance-system-killer-protein	gnl\|CDD\|226079	COG3549, HigB, Plasmid maintenance system killer protein [General function prediction only].	8.8175e-28
NC_007484.1\|WP_002814158.1\|3135928_3138184_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|315987	pfam13424, TPR_12, Tetratricopeptide repeat.	9.97385e-22
NC_007484.1\|WP_011331056.1\|3128882_3130355_+\|hypothetical-protein	gnl\|CDD\|238020	cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.	5.15028e-13
NC_007484.1\|WP_002812282.1\|3138260_3139313_-\|DNA-binding-protein	gnl\|CDD\|378704	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term. The broad host-range plasmid RK2 is able to replicate in and be inherited in a stable manner in diverse Gram-negative bacterial species. It encodes a number of co-ordinately regulated operons including a central control korF1 operon that represses the kfrA operon. The KfrA polypeptide is a site-specific DNA-binding protein whose operator overlaps the kfrA promoter. The N-terminus, containing an helix-turn-helix motif, is essential for function. Downstream from this family is an extended coiled-coil domain containing a heptad repeat segment which is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning.	9.21722e-12
NC_007484.1\|WP_002812325.1\|3127320_3127926_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.37334e-48
NC_007484.1\|WP_002813332.1\|3131841_3132102_-\|mercury-resistance-system-transport-protein-MerF	gnl\|CDD\|371528	pfam11431, Transport_MerF, Membrane transport protein MerF. The mercury transport membrane protein, MerF has a core helix-loop-helix domain. It has two vicinal pairs of cysteine residues which are involved in the transport of Hg(II) across the membrane and are exposed to the cytoplasm.	6.1977e-19
NC_007484.1\|WP_002813084.1\|3122730_3123618_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	0
NC_007484.1\|WP_002813328.1\|3116437_3117280_-\|MtrB/PioB-family-outer-membrane-beta-barrel-protein	gnl\|CDD\|371763	pfam11854, MtrB_PioB, Putative outer membrane beta-barrel porin, MtrB/PioB. MtrB-PioB is a family of bacterial putative outer membrane porins. This family, is secreted as part of the pio (phototrophic iron oxidation) operon that has been found to couple the oxidation of ferrous iron [Fe(II)] to reductive CO2 fixation using light energy. PioABC is found in Rhodopseudomonas palustris and MtrB-PioB is likely to be a beta-barrel porin. Similar to other outer membrane porins, PioB and MtrB are predicted to have long loops protruding into the extracellular space and short turns on the periplasmic side.	9.00983e-30
NC_007484.1\|WP_002812288.1\|3139656_3140121_-\|extradiol-dioxygenase	gnl\|CDD\|319908	cd07244, FosA, fosfomycin resistant protein subfamily FosA. This subfamily family contains FosA, a fosfomycin resistant protein. FosA is a Mn(II) and K(+)-dependent glutathione transferase. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.	2.55659e-10

>NC_007484.1|WP_002812325.1|3127320_3127926_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MFSDYFEIQSIGQPEDTHFILSKLFTRIHGVLKSESLNIGLGFPKLSQHSPGSIVRCFGTPRELEQLQRNSGITHLEGRGMITIEPIAAVPSDANAIAYRRDRSAEKDLAGFRQRQMRRRVRRAEHAPNQPETNLRIEAKSRLQDNEKAERPPYLLLERDGRRLPIHISTASFQINTNICQFSSYGLARKVEDKYSAVPMF
>NC_007484.1|WP_002814020.1|3126232_3127306_+|type-I-F-CRISPR-associated-protein-Csy3
MATVQLPSLLNYTRSIVPSEGTFWVANADNRPLLIQDKTLLGTIANYSSVYKKDKQRDEGAIEKEMMAGDNNIQRVDSCHLPADADTFELRFTLKFLANANGPEACEGAEFREDLESIAQAYAEKGGFTLLAERYLANLLNGRFLWRNRYGVQRQITLRAPYNELKEKTFEIIDRAEPTLPQVRMDELKPWIDHIASALSGKTSFFLMEVSARVTIGLGQEVYPSQEFVDKDSRGQGKKSKTLFFVQVADQQVAAMHSQKIGNAIRTIDNWYPDANADRPLAVDPFTVDKRRARAVRLPDHGKSDFYSLLKNLPALKDDIEHAPNAEAIPGQAHYFMAVLIRGGVFSGEKKAEKKAK
>NC_007484.1|WP_002811940.1|3125280_3126210_+|CRISPR-associated-protein-Csy2
MSSYYLLLPTLHVTGCNWESSHLTRSLPLTAMAGFADYLVYFELADNAAEAGADLKGFAVCLHDGQIHEGLSKNPLALCKGNGLSQARDDLLNPPLLPEVKGSLSLSLVVALELEDKSALDEWLKNRATAFLQTRRLAGGDIIGIGQPKIYSKRSELAREMGRLPPGWFIGNGAEFISNAPDPFAALINATAWFPVEDKEPQTTSAHPSPSKRRQHPRHWLYATCVGYQLLESPQPRRNRSHGSSDTNSATNHAYAEPVHSLAELVWARKLLQPQDDSTTDNWLTENNLLWRWETDPPSRTVYLSTQAL
>NC_007484.1|WP_002812358.1|3123931_3125284_+|hypothetical-protein
MLIDDLTQALSASEGSSAEQLKQLKAQLLGHCRAPVKVTDEDVPPLLIAAINFAYGNPTSPEQLLSAESAKAALTAKVTPKTIGDMFIWAALASHMGTHHPKSRNDKVSSGPIVARSLTPPPAGLVTSANLRTRQFSGSGNGANTAHYQWLAFTYEDSAGVFSVIERAASQDERLGETVLTLGIQESQWQAFQEAAEAHLTVTNSAPLDRQLKQVFIPDPGQNNDFIVITPLAATAVIGAFEQHRTKLREQDANLNFHRIGVGGAKPQNAGSLMNELGGNLRQLTMTIPRLDLTQRQRRLWHLQRGRLFQPLPKKEAQRFTWWLELDWTQRYGNRQDHLQRLEQRIAEWLLPELEVQEQLFAWLSSDSLDAVHERQKLEAENLPNWILTLAGISKNPETEHGTHEARQEAAYKALTFHLKSPLSDEIDKLIQDALESLLARRYSAEGAVA
>NC_007484.1|WP_002813084.1|3122730_3123618_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MPILPSHRQGLYYLEHCRVMAKDERVVYACQEGAFTKFFAIPPANTNVILLGSGTSLTQAAARLLASEQVMVAFVGGGGSPLFLASQNEYRPTEYCQAWMRLWQDNDQRLKVAKTFQRNRAEFLMQQWPKLAEPKPHKASLEKLAERYLADIELAGDNGTILAQEAKFAKKLYKFWANCTETENFTRDPGKRDFNDPFNSYLDHGNYLVYGIAAAVLWVLGIPHSLPVIHGTTRRGALVFDVADIIKDTCVMPIAFQHAAAGRSDQEMRQACIAWLDESHAMTFLFQSIKRVAQL
>NC_007484.1|WP_002814278.1|3119233_3122734_-|hypothetical-protein
MIILFVSECEKAAWKRSRRILSRYAVQIGRRTWLARISAEGLQNIRRELTQAASRHTSVACHRVKGRYQTELAWVVGSRRHFSRNGEFAFSHSATPLPSVNEEAAPAVRLLNHLCILAGLFHDLGKHGACFQRKLRDENSNQSDPVRHERISLLLLLRLIILTALPAAEDNPPPVEPTPKRRRRRVAGANHNLSKPALGLASLKDEQWLAALTDSKKIYEALHRIWKETSHDHWRELIPIEGSTLRPQWSSAEGDRGLAPLLSVLCFLIISHHKLPDGHEDSFAPLEETYLNRSQELQDGLRLATDYRPAWSQSPRWVNEITKHARRARYLLQEHALPIRDRVLWYSAARYMARCALVLADHSISSQAKRELPVPSQSAQAQVCFANSQQGQLRQTLAAHLERVGKLSGKAFNQLHQLQHNRKASTIETSPPALTVPIKEEAFSWQQKAERKVLQIQRQEDNAKEGFFALVMAETGSGKTRGNARILAAANRHQNYRLTVALGLRTLTLQTGDEYRDDLGFGKMPDAVGDQCAIMVGGALTTALHEMANAGEEAGAEKGNHLFSQEEQAGVESSALDDSLYEGITGEFDFDYDPDAPWPEDIIAPNNPKLNHLLQVPVLVCTIDHLMPFLQSQRASAAVLGFRMAGSDLIIDEIDSFSAEDLPALLKLAYVVGFNGRKLLLSSATLPPATARAFYRAYQTGFNRWRQLQGMESGPIRCGWFSHHAAHIKLASVADHAAFTKQHDRFIQALLNTLQQQPARRRLDTVLIPIAEGPAAVYQNIMESCRELHQQWASHDPESGVRYSIGCVRWSNVAHTCGFAKHWLNMPANLDDIQVKLICYHAKHLPLIRHHIEQTLNTLLKRKEGRQAHDHPTLRAHLENCRQQGKTHLLVIVSTSPISEVGRDHDYDWGIVEPNSYWSLIQMAGRIWRQRRHWEARQPNMRIMSQTMRGLNKQPMRFTKPGPESKHFKLSDRAETLAQIFDLESLQESIDARFTLQEPLIQAEKIKNQYIYPDMRQLEHGQLQRLLESTEQSKQAMSFIEGARPQMVLTQRHSQCCPFRKDQNPNLLWFDREDDGVWKYLDKKEKKAKNVKDKVHEKRNYPCLAQSYFSPDELSRDSLHEKWREQLARRGVTDSHTINALPLSIGDNFEQGKQLYYSDIIGWIFS
>NC_007484.1|WP_002812901.1|3118352_3119210_+|DUF4743-domain-containing-protein
MSYLHQIKACNSYTLKDFRPFYVDEVQIGHIRSSFAEKLRSWPAVFRVSPAAVYLAPDLHSFATRTEKVKTVLKALVEEGALPRWHGEEYPVTASSREAALFAIDRGAAPYFGIRAFGQHLNGFVNDGDQLKIWIGRRSPNKWNAPDKLDNLVAGGVPHGVPLRENLAKECWEEAAIPPELAAQALSVGYISYRMETAQGFKPDVMYCYDLELPPDFVPQCQDGEVEEFYLWPVEKVAALVRETNSFKKNCNLVIIDFLIRRGFITPEHPDYLEMVAGLRVPLEA
>NC_007484.1|WP_002813328.1|3116437_3117280_-|MtrB/PioB-family-outer-membrane-beta-barrel-protein
MAIAETTQANSANGVNTLFANTLNPTGIDTTQRRDERGLATFKETFSQSPTGLLYAPPFKPPEFGKINAWRYRGSLEGGFLLDDDGDTPENFIEYSDWSEGPLLNYFNLSAWREDNGYFLDLSGGGVDRKDQYYLAQGGQYGLFKLMGFFNEIPHVFETNAITLFEGVGSDQLLLPPGLIPGDNSTADIRTALESASRRSLDLSRAKGGLGFEITPSTRFRMYTRYTQENRTGGRPFGGTFLAPFYAAARQGGWWKQWNRLTTEPIIYSPVLIMDTISTN
>NC_007484.1|WP_168023436.1|3114842_3116519_-|MtrB/PioB-family-outer-membrane-beta-barrel-protein
METVEPIDYRTHNLLAGINYGHNQYQLNFTYNASFFRNHNQALSWENPFQNLPGDSFAVERGRFALYPDNDFHNVKLDFSYVLPLRGLFTSTAAWSRMHQDDDLLPPTINSGQSAAGIDLSNWNTTAALGRKTANAEINTWLFQTGLRLIPFDPLTLRADFRYYDEDNDTDYTAFNPLAGEIGYIVEDGADPGRGFVFNPNQSAIPFHFRNVPFAQRKINWSFNADYRLIPKTVLSLGYQREEIDRDYRERDKTTENRFIVRTSNRSVSWATFRFSYEFSDRTDSPYRFDPYTSFFTNSLPGFSSRPPAGTTPFTLADLRKFDLSDRKQHLFCGLANVLLREDMDLSLSFARVDNDFDARFGLLQDESNTVNLEWNYQPSAQLSTYVFGSYQTKTNAMANINDAGFSTDPNAGGATFPLRAAWQENVDETNSALGFGFYYQFDRFIFDGNYSFNWSRSEVDYEAVSNLALANPELALDTIGNSFPDLRYTRHILETNLRWNISKNLALRLLHRYERGTIRDWHFEGLNPLINNHLFLMATPNDFEVNVIGLLIQYRIP
>NC_007484.1|WP_002814225.1|3113805_3114249_-|hypothetical-protein
MVDDFSFTTQGGPGSINFGHSGTWYNPSTSGQGFLIDVIPSRGELFVAWFTFNSDGTGQRWFTAQGPFENNRGELTLFETTGGVFNDPTPVATTEVGTLNIEFQSCTNGTVSFNIPDEGLQGIIPLVKLVPDVICNDLANGSLMVSE
>NC_007484.1|WP_011331056.1|3128882_3130355_+|hypothetical-protein
MANTYLVERFCAVFAALIMVVFLTSTQAMAQSCENACGDQHHLCLDDCTAHSPHNICVPLCRADRARCLEDCNNPIPHAPENVTLVEREATSIELRWRDRADNEDGYQLLRRVGASGPWSIQASWGPWSGTTTYTDTGLLPDTLYCYRVRAFNRNGGNNPLSRCAFTKDGNGYAVWRAQIIFHTANVSNANTDDKVYVNLNGYANAVPRNNSTWLDYGRNDFERGTTYAYDLNLDYLGEIGDINQINISKTGDDGWCIQDFTLQVNGLDLFTQDFSNLSGGCLWLDSEGGHSRTHIVSHGALRAHPDWNSYNHTGAKLLLANNGIKNEEMVSRLEGMVGDDIHDNKLYWGHLHGPAVEVSYGCPAGAASCQTLHIDLDLAASAPGPNPEVDVDFDLTFSCDNRQLLITSSNVEIDADSNWFWEILSLGLINFIDNAVEERIEKGWKAITEVIEVGADCRISVDTEGNLLIEEGESFNRAKNLPKLDLKVR
>NC_007484.1|WP_002812363.1|3130445_3131852_-|mercury(II)-reductase
MSHENNLHIAVIGSGGAAMAAALKGAERGARVTLVERGTLGGTCVNTGCVPSKILIRAAHIAHLRKESPFDGGISVQRPVIDRAALLAQQQGRVEELRDAKYERILRGHPAVTVLHGEARFMDAHQLAVTLTEGGEQTLRFDRAFIGTGARPAEPPVPGLADTPYLTSTRALTLESVPERLLVIGAGFVALELAQAFARLGSQVTVLARSRMLSREDPAVGEALEAAFCREGIQVLKETQASRVDYRDREFVLETNAGTWRAEQLLVATGRTPNTEALDLESIGVETARGAILVDEHLQTTVPGIYAAGDCTDQPEFVYVAAAGGSRAAVNMTGGEATLDLSAMPGVLFTDPQVGTVGLTEAQALEQGFNVESRVLDLENVPRALVNFDTAGFIKMVAERDSGRLLGVQAVAGEAGELIQTAVMALRTRMTVQEIGDEPFPYLTMVEGLKLCAQAFTKDVTQLSCCAG
>NC_007484.1|WP_002813332.1|3131841_3132102_-|mercury-resistance-system-transport-protein-MerF
MKNPQALLRVSVIGTILVALCCFTPILVILLGTLGLAALTGYLDVVLLPALAFFIGLTFYALWRKKQYDACCNHDAPPSRKSSHES
>NC_007484.1|WP_002811971.1|3132208_3132616_+|Hg(II)-responsive-transcriptional-regulator
MNEAPENLTIGTFAKAAGVNVETIRFYQHKGLLPTPERPPGGIRRYGNADVARVKFVKAAQRLGFSLDEIGQLLKLEDGMHCSEAAALASQRLDDVRAKLADLHRIEAVLTELVNECHTHQGDVSCPLITALHDG
>NC_007484.1|WP_002814243.1|3134885_3135164_+|plasmid-maintenance-system-killer-protein
MIKCFRCKETQRLFETGKSRRWQNIRAVAERKLAQINAARELRDLASPPGNQLEALEGDRAGQYGIRINKQWRVCFIWTDEGPEAVEIVDYH
>NC_007484.1|WP_002814171.1|3135176_3135479_+|HigA-family-addiction-module-antidote-protein
MFKNRMRPVHPGEILREDYLKPLEMSVNALAKALHAPTPRINDVVLERRGVTADTAMRLARYFDTTPQFWMTLQMEHDLRVAEIERANRIESEVQPRQVA
>NC_007484.1|WP_002814158.1|3135928_3138184_-|tetratricopeptide-repeat-protein
MPPTSRYGPHPNRPAANKQFTNRDGPIKAFQAARQALAPDQHDVLTFHGVGGQGKTALGKKFRQILEEETPRAALWGHVDLADTHLPTPDRILLELRRSLRRSGKIEFPAFDVAFAHYWQQAYPHLKFQDTHRDLLTDKEGVFAHALESASSYAEALPAGIGLTMIALNWVRQRMRDFDNRYRPALRGLETFSPTEILDRLPYYLGLDLCGYQRRQRAKQLIVFLDTYDALWETFTQGARWEVDAWARELVASAPGVLFVVFAREKLTWDTHEPDAWRGCLHHQPPLAPLTDEDADTFLRQIPIEEEAVRQTIIQAAEGHPFYLDLEVEHYLDLVADGATPQPEHFGQTKQAILARFLRYRAGEEQATLKVLSVVRSFDFELLEALVRAFQTGFPPTEFFNFVRYSFVAPESGERYRLHSLMQAHLLESLEPALQKKIHDFAFTYYDARCQPESPKDLQPAHEIALVEAFYHRDMTDPQEAAAWINQRTTVFYEAARYSLVEPLYQRALAIREQILGPDHPDTATSLNNLAELYRAQGRYAEAEPLYQRALAICEQVLGPDHPDTARSLNNLAGLYKAQGDYGQAEPLYRRALAICEQALGPDHPHTATSLNNLAGLYDSQGHYGQAKPLYQRALAIYEKTLGPDHPRTATSLNNLAALYDTQGDYARIEPLYQRALVIHEKTCGPDHPRTATSLNNLAGLYKDQGSYAQAEPFYQRALSICEKNLGPDHPDTHTVRQNYQALLAAMGQQK
>NC_007484.1|WP_002812282.1|3138260_3139313_-|DNA-binding-protein
MARPGVTYREVAEVATTLTHQGQPPTVDGVRAVLGTGSKSTIGPLLKQWKAQQAERVSEAETGLPAALVAVVKGLYESLQQQAQSQIDTVKEETQAQVEAARQAQAAAEAHQQALEKEVNRQQAAYQRLLEEKETLNIALEETQRAQLTLQAEAEGLRERLEDRTQVAQDLKQQLTQAQTNLEHYREAARQQREQERADFERQNRRLEQILKENRAERHLLQASCTQLEKDQAQLQAERDQLRAENASLHEQGGQLQQKLEQTQRQWAEGEGRYQVLAQTHQEVITKLDAQEKAFLEAEKQKARVQEKVAALSAALQNAQDKIEGLQNENRVLAQEKAAIEGQFKQRQQT
>NC_007484.1|WP_002812288.1|3139656_3140121_-|extradiol-dioxygenase
MSMQSPSATKARALGINHIALEVDDVNAALDFYGQIVEFSLRGRHEGMAFIDLGDQFIALTEKRTQEPDKHRHFGLVVDDKAMVKKTLEALNIETLPGAFLDFIDPWGNRVQIVQYSEIQFTKAPHVLRGMGIKQLDKSDEAVQALAEKGMAPE
>NC_007484.1|WP_002813888.1|3140258_3141542_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MLAAGKIRGKISAARGCLQHHLATCHRPNEKSIEAMTEHDSTTVQRSYTFRFYPTSVQRQQLAMEFGHARWVWNTCLTWRGRQYRVHDKRVTGVDFSRQLTFLKGLGPYAWLKEASATCLIQKLRDQDTAFRHFFAGRAKYPRFKKRTHTQSIRYQLDQRQVAGMYRAGEFLKLPKLGALKLKWSRKPQGIPKMVTVTQDCVGRYCVSFMCEETLQPLPRKPNGIGVDLGVCDVVVTSEGWKSGNPRHLRTHTRQLRKTQRRLSRKRKSSVRWHRQRIRVAKAHARVSNTRQDWLHKLTTALIRQAGFIAMETLNVRGMMANRRLSRALGDVGMHELKRQLAYKAQWYGRAFRQVDRWAPTSKACSECAAVQETMPLNIREWTCPDCKSVHDRDINAARNILRLATVGRTGSDARGGVHKPEVAYGC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_007484_1	1.1\|3128086\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128086-3128117	32	NZ_CP009218	Rickettsiales bacterium Ac37b plasmid 1, complete sequence	37684-37715	4	0.875
NC_007484_1	1.4\|3128266\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128266-3128297	32	JX195166	Pectobacterium phage My1, complete genome	34861-34892	7	0.781
NC_007484_1	1.6\|3128386\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128386-3128417	32	NZ_CP045274	Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence	15323-15354	7	0.781
NC_007484_1	1.3\|3128206\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128206-3128237	32	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	310962-310993	8	0.75
NC_007484_1	1.6\|3128386\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128386-3128417	32	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	166690-166721	9	0.719
NC_007484_1	1.6\|3128386\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128386-3128417	32	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	524080-524111	9	0.719
NC_007484_1	1.6\|3128386\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128386-3128417	32	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	287364-287395	9	0.719
NC_007484_1	1.6\|3128386\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128386-3128417	32	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	287404-287435	9	0.719
NC_007484_1	1.6\|3128386\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128386-3128417	32	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	274430-274461	9	0.719
NC_007484_1	1.6\|3128386\|32\|NC_007484\|PILER-CR,CRISPRCasFinder,CRT	3128386-3128417	32	MN497415	Vibrio phage vB_VhaM_VH-8, complete genome	6918-6949	10	0.688

1. spacer 1.1|3128086|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009218 (Rickettsiales bacterium Ac37b plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.875

-taccaagtacatcaatatctctggagttattt	CRISPR spacer
ctaccaaa-acatcaatatctcttgagttcttt	Protospacer
 ******. ************** ***** ***

2. spacer 1.4|3128266|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to JX195166 (Pectobacterium phage My1, complete genome) position: , mismatch: 7, identity: 0.781

acctact-caccaaagattggggtttatctatc	CRISPR spacer
-ccgaccgcaccaaacattggggtttagctaat	Protospacer
 ** **. ******* *********** *** .

3. spacer 1.6|3128386|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 7, identity: 0.781

gctataaaagttaattagtgagaaaaggggat	CRISPR spacer
cttataaaattttattagtgagaaaagaaaat	Protospacer
 .******* ** **************...**

4. spacer 1.3|3128206|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 8, identity: 0.75

----aatttaaaaagaacagaagtcccgtgttatcg	CRISPR spacer
ttccagtt----aagaaccgaattcccgtgttatca	Protospacer
    *.**    ****** *** ************.

5. spacer 1.6|3128386|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 9, identity: 0.719

gctataaaagttaattagtgagaaaaggggat	CRISPR spacer
agtataaaagataattagtgagtaaatatttt	Protospacer
. ******** *********** *** .   *

6. spacer 1.6|3128386|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.719

gctataaaagttaattagtgagaaaaggggat	CRISPR spacer
agtataaaagataattagtgagtaaatatttt	Protospacer
. ******** *********** *** .   *

7. spacer 1.6|3128386|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.719

gctataaaagttaattagtgagaaaaggggat	CRISPR spacer
agtataaaagataattagtgagtaaatatttt	Protospacer
. ******** *********** *** .   *

8. spacer 1.6|3128386|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.719

gctataaaagttaattagtgagaaaaggggat	CRISPR spacer
agtataaaagataattagtgagtaaatatttt	Protospacer
. ******** *********** *** .   *

9. spacer 1.6|3128386|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 9, identity: 0.719

gctataaaagttaattagtgagaaaaggggat	CRISPR spacer
agtataaaagataattagtgagtaaatatttt	Protospacer
. ******** *********** *** .   *

10. spacer 1.6|3128386|32|NC_007484|PILER-CR,CRISPRCasFinder,CRT matches to MN497415 (Vibrio phage vB_VhaM_VH-8, complete genome) position: , mismatch: 10, identity: 0.688

gctataaaagttaattagtgagaaaaggggat	CRISPR spacer
tatataaaagttaattagtaagcaattcagta	Protospacer
  *****************.** **   .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6934 : 52706

Moraxella_phage(16.67%)

tRNA,transposase,integrase,terminase

attL 6054:6068|attR 48140:48154

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6054:6068	attL	NA	NA	NA	NA
WP_002813691.1\|6934_7330_-\|transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	3.2e-16	45.6
WP_002812924.1\|7397_7565_-	hypothetical protein	NA	NA	NA	NA
WP_081430929.1\|7483_7750_-\|transposase	transposase	NA	NA	NA	NA
WP_166485282.1\|7888_7978_+\|transposase	transposase	NA	NA	NA	NA
WP_147094544.1\|8008_8404_+\|transposase	transposase	A0A077SK28	Escherichia_phage	2.8e-20	41.1
WP_002814102.1\|8400_8592_-	hypothetical protein	NA	NA	NA	NA
WP_002814173.1\|8631_8907_-	hypothetical protein	NA	NA	NA	NA
WP_002811878.1\|8986_9124_-	hypothetical protein	NA	NA	NA	NA
WP_011330202.1\|11318_12410_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_002812476.1\|12437_14861_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	1.9e-111	33.6
WP_002813440.1\|14919_15621_+	hypothetical protein	NA	NA	NA	NA
WP_002813313.1\|17143_18151_-	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.2e-59	40.2
WP_002812760.1\|18365_19184_-	formylmethanofuran dehydrogenase subunit C	NA	NA	NA	NA
WP_036497813.1\|19266_20175_-	formylmethanofuran--tetrahydromethanopterin N-formyltransferase	NA	NA	NA	NA
WP_002812455.1\|20171_21842_-	formylmethanofuran dehydrogenase subunit A	NA	NA	NA	NA
WP_002812230.1\|21856_23134_-	formylmethanofuran dehydrogenase subunit B	NA	NA	NA	NA
WP_011330203.1\|23321_23927_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_002813322.1\|23930_25688_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_002813849.1\|25793_28004_-	primosomal protein N'	NA	NA	NA	NA
WP_002812228.1\|28109_28664_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_011330204.1\|28737_30057_-	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	1.0e-26	26.9
WP_011330205.1\|30468_32022_-	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_002812587.1\|32677_33424_+	sulfurtransferase	NA	NA	NA	NA
WP_011330206.1\|33427_33685_+	glutaredoxin 3	A0A088C3W5	Shewanella_sp._phage	1.7e-07	35.4
WP_002813889.1\|33750_34245_+	protein-export chaperone SecB	NA	NA	NA	NA
WP_002812028.1\|34255_35290_+	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_011330207.1\|35306_36278_+	hypothetical protein	NA	NA	NA	NA
WP_002813041.1\|36272_37454_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_002814059.1\|37543_38032_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_002814298.1\|38037_38415_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_002812198.1\|38532_39126_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_002812606.1\|39122_40130_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.5e-105	58.7
WP_155814699.1\|40210_40429_-	hypothetical protein	NA	NA	NA	NA
WP_002813167.1\|40547_40763_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_002812733.1\|40800_41271_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	2.4e-26	54.5
WP_011330208.1\|41377_43102_+	DNA primase	A0A1S5RG58	Helicobacter_phage	6.0e-43	35.3
WP_002814013.1\|43211_45020_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	5.7e-36	35.3
WP_002812425.1\|45850_46606_+\|integrase	site-specific integrase	K7PHM9	Enterobacterial_phage	4.0e-28	34.3
WP_011330209.1\|46608_47358_+	hypothetical protein	NA	NA	NA	NA
WP_168023431.1\|47416_47731_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011330422.1\|47732_48230_+\|transposase	IS630 family transposase	NA	NA	NA	NA
48140:48154	attR	NA	NA	NA	NA
WP_011330211.1\|48775_49048_+	hypothetical protein	NA	NA	NA	NA
WP_011330212.1\|49044_49437_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011330213.1\|49433_50033_+	hypothetical protein	NA	NA	NA	NA
WP_002813586.1\|50042_51848_+	toprim domain-containing protein	A0A0F7L6A5	uncultured_marine_virus	7.0e-103	38.6
WP_147094561.1\|51908_52706_-\|terminase	terminase small subunit	NA	NA	NA	NA

DBSCAN-SWA_2

408396 : 446892

Geobacillus_virus(16.67%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002812808.1\|408396_409341_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_002813283.1\|409333_411409_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_002812196.1\|411468_412008_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_002811955.1\|412000_412813_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_002812942.1\|412857_414948_+	EAL domain-containing protein	NA	NA	NA	NA
WP_002813917.1\|414984_415872_-\|protease	protease HtpX	NA	NA	NA	NA
WP_049750826.1\|415948_419596_+	5-oxoprolinase	NA	NA	NA	NA
WP_002813444.1\|419629_421213_-	bifunctional aminoglycoside phosphotransferase/ATP-binding protein	NA	NA	NA	NA
WP_002813130.1\|421261_422377_-	CHAT domain-containing protein	NA	NA	NA	NA
WP_002813959.1\|422364_423495_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_002813680.1\|423972_425256_-	hypothetical protein	NA	NA	NA	NA
WP_011330318.1\|425252_425639_-	hypothetical protein	NA	NA	NA	NA
WP_002812707.1\|425945_426236_+	transcriptional regulator	NA	NA	NA	NA
WP_155814703.1\|426266_426416_+	hypothetical protein	NA	NA	NA	NA
WP_168023432.1\|426787_427285_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_011330421.1\|427286_427619_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_036498043.1\|427775_428171_+\|transposase	IS200/IS605 family transposase	A0A0H3UZM0	Geobacillus_virus	1.8e-32	49.6
WP_011330321.1\|428171_429293_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A191SB13	Nostoc_phage	9.9e-39	35.4
WP_002813116.1\|429380_430601_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	1.4e-83	44.3
WP_147094528.1\|430644_430977_+	hypothetical protein	NA	NA	NA	NA
WP_011330322.1\|430927_431890_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
WP_002812233.1\|432094_433459_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_002813159.1\|433620_434676_+	response regulator	B5LWA6	Feldmannia_species_virus	2.3e-05	30.4
WP_002814085.1\|435129_435981_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_011330323.1\|436046_437045_+	DUF1722 domain-containing protein	NA	NA	NA	NA
WP_011330324.1\|438538_439903_+	hypothetical protein	NA	NA	NA	NA
WP_011330325.1\|440143_440548_+	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA
WP_011330326.1\|440763_441813_+	ParA family protein	H2BD62	Pseudomonas_phage	8.6e-45	34.7
WP_011330327.1\|441898_442186_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_002813362.1\|442178_442400_-	hypothetical protein	NA	NA	NA	NA
WP_002813673.1\|442511_443507_-	hypothetical protein	NA	NA	NA	NA
WP_002812806.1\|443958_444114_+	hypothetical protein	NA	NA	NA	NA
WP_002812212.1\|444151_445306_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A2I7RIF3	Vibrio_phage	1.1e-69	45.5
WP_002813031.1\|445302_446892_+\|protease	M48 family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_3

843444 : 851565

Escherichia_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002811073.1\|843444_844917_+	glucose-6-phosphate dehydrogenase	A0A1D8KIX9	Synechococcus_phage	7.0e-85	39.2
WP_002809955.1\|844929_846006_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	2.8e-91	49.5
WP_002811087.1\|845998_846877_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	2.9e-94	60.1
WP_002810067.1\|846895_847441_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	8.2e-47	52.5
WP_002811113.1\|847437_848325_+	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	1.2e-31	34.3
WP_002811467.1\|848334_850347_-	asparagine synthase (glutamine-hydrolyzing)	F2Y1H0	Organic_Lake_phycodnavirus	1.7e-28	27.6
WP_002808586.1\|850482_851565_-	aspartate carbamoyltransferase	Q84489	Paramecium_bursaria_Chlorella_virus	1.7e-32	31.6

DBSCAN-SWA_4

1664389 : 1721534

Thermobifida_phage(16.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011330675.1\|1664389_1664803_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	8.4e-28	48.9
WP_002811516.1\|1664859_1666053_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A077SLN2	Escherichia_phage	1.3e-110	59.8
WP_002808990.1\|1666109_1666649_+	hypothetical protein	NA	NA	NA	NA
WP_002808642.1\|1666761_1668267_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_002811642.1\|1668280_1669333_+	DUF4351 domain-containing protein	S5VY82	Leptospira_phage	3.6e-06	24.8
WP_036497520.1\|1669868_1671158_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0R8V9X2	Thermobifida_phage	5.1e-71	41.6
WP_049750832.1\|1671270_1671471_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_011330678.1\|1672304_1673813_+	sugar transferase	NA	NA	NA	NA
WP_002811084.1\|1673928_1675149_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_002811302.1\|1675162_1675906_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_002810711.1\|1675978_1677751_+	hypothetical protein	NA	NA	NA	NA
WP_011330679.1\|1677790_1678093_+	hypothetical protein	NA	NA	NA	NA
WP_002811059.1\|1678085_1679351_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_002810218.1\|1679360_1680395_+	sulfotransferase	NA	NA	NA	NA
WP_011330680.1\|1680404_1681829_+	hypothetical protein	NA	NA	NA	NA
WP_011330681.1\|1681818_1682781_+	NAD-dependent epimerase/dehydratase family protein	A0A1V0SKV4	Klosneuvirus	4.5e-32	29.2
WP_011330682.1\|1682777_1684004_+	glycosyltransferase	NA	NA	NA	NA
WP_002810053.1\|1684033_1684747_+	FkbM family methyltransferase	Q58M88	Prochlorococcus_phage	6.8e-09	32.8
WP_002810351.1\|1684871_1685102_-	hypothetical protein	NA	NA	NA	NA
WP_011330683.1\|1685309_1686491_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0R8V9X2	Thermobifida_phage	2.3e-78	44.7
WP_002810571.1\|1686788_1686998_+	type II toxin-antitoxin system VapB family antitoxin	NA	NA	NA	NA
WP_002810666.1\|1686994_1687402_+	PIN domain nuclease	NA	NA	NA	NA
WP_002811106.1\|1687468_1688590_+	GDP-mannose 4,6-dehydratase	M1HAR7	Acanthocystis_turfacea_Chlorella_virus	8.1e-134	61.3
WP_002811741.1\|1688613_1689846_+	glycosyltransferase WbuB	NA	NA	NA	NA
WP_002810417.1\|1689982_1690759_+	polysaccharide export protein	NA	NA	NA	NA
WP_002809953.1\|1691229_1691658_+	hypothetical protein	NA	NA	NA	NA
WP_002811088.1\|1691835_1693341_+	TolC family protein	NA	NA	NA	NA
WP_011330686.1\|1693337_1694741_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_002810016.1\|1694737_1697941_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_011330687.1\|1698578_1699331_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_002809263.1\|1699726_1701901_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.7e-90	37.5
WP_011330688.1\|1701994_1702672_+	cation transporter	NA	NA	NA	NA
WP_002809496.1\|1702680_1705905_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_011330689.1\|1705898_1707776_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_002811697.1\|1707772_1709110_-	TolC family protein	NA	NA	NA	NA
WP_002809055.1\|1709199_1709640_-	hypothetical protein	NA	NA	NA	NA
WP_011330690.1\|1709695_1710067_-	hypothetical protein	NA	NA	NA	NA
WP_011330691.1\|1710103_1710313_-	hypothetical protein	NA	NA	NA	NA
WP_002808907.1\|1710394_1711855_+	TolC family protein	NA	NA	NA	NA
WP_002810873.1\|1711908_1713327_+	copper oxidase	NA	NA	NA	NA
WP_002811765.1\|1713399_1714107_-	CAP domain-containing protein	NA	NA	NA	NA
WP_002809668.1\|1714216_1714708_-	hypothetical protein	NA	NA	NA	NA
WP_002809532.1\|1715001_1716108_+	ferrochelatase	NA	NA	NA	NA
WP_002810127.1\|1716251_1716911_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.4e-31	50.0
WP_002810572.1\|1716917_1718261_+	MFS transporter	NA	NA	NA	NA
WP_002808697.1\|1718286_1719333_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_002810561.1\|1719336_1720242_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	1.2e-39	34.1
WP_002808965.1\|1720257_1720752_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_166485271.1\|1721399_1721534_-\|transposase	transposase	Q9G0F2	Phage_Gifsy-1	2.6e-07	58.1

DBSCAN-SWA_5

1740220 : 1777998

Saccharomonospora_phage(33.33%)

transposase,integrase,holin,protease,tRNA

attL 1739252:1739271|attR 1773895:1773914

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1739252:1739271	attL	NA	NA	NA	NA
WP_002811211.1\|1740220_1740565_-\|integrase	integrase	NA	NA	NA	NA
WP_147094535.1\|1741290_1741563_+	hypothetical protein	NA	NA	NA	NA
WP_147094534.1\|1742214_1742454_+	hypothetical protein	NA	NA	NA	NA
WP_036497337.1\|1742503_1742980_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_002809035.1\|1743104_1743347_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_002811207.1\|1743331_1743670_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_002810089.1\|1743752_1744106_+	hypothetical protein	NA	NA	NA	NA
WP_011330695.1\|1744384_1744693_+	hypothetical protein	NA	NA	NA	NA
WP_002808869.1\|1746347_1746500_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_011330696.1\|1746560_1747526_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_036497340.1\|1747690_1748209_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_002811152.1\|1748315_1748819_+	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_002808707.1\|1748845_1750342_-	sodium/proline symporter PutP	NA	NA	NA	NA
WP_002811552.1\|1751100_1751277_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_011330698.1\|1751450_1751669_+	DUF2945 domain-containing protein	NA	NA	NA	NA
WP_002810610.1\|1751677_1752220_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_002809910.1\|1752968_1754438_+	L-lactate permease	NA	NA	NA	NA
WP_002808657.1\|1754444_1754615_+	hypothetical protein	NA	NA	NA	NA
WP_011330700.1\|1754733_1755018_-	hypothetical protein	NA	NA	NA	NA
WP_002810120.1\|1755209_1755929_+	hypothetical protein	NA	NA	NA	NA
WP_002809298.1\|1755925_1756504_+	hypothetical protein	NA	NA	NA	NA
WP_002810329.1\|1756671_1756809_+	hypothetical protein	NA	NA	NA	NA
WP_002808659.1\|1756862_1759214_-	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_011330701.1\|1760579_1764092_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_002808608.1\|1764156_1764966_-	hypothetical protein	NA	NA	NA	NA
WP_011330702.1\|1765037_1766681_+	DNA mismatch repair protein MutS	NA	NA	NA	NA
WP_002809922.1\|1766750_1767416_-	flavodoxin reductase	NA	NA	NA	NA
WP_011330703.1\|1767729_1768821_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	I4AZM3	Saccharomonospora_phage	1.9e-26	37.1
WP_002809942.1\|1769684_1770242_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_002808571.1\|1770602_1771247_+	hypothetical protein	NA	NA	NA	NA
WP_002809508.1\|1771246_1771702_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_002809720.1\|1771688_1772672_+	DUF3618 domain-containing protein	NA	NA	NA	NA
WP_081430965.1\|1772930_1773236_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002808538.1\|1773441_1773765_+\|transposase	transposase	NA	NA	NA	NA
WP_036497531.1\|1773913_1774072_-	CopG family transcriptional regulator	NA	NA	NA	NA
1773895:1773914	attR	NA	NA	NA	NA
WP_036497533.1\|1774106_1775261_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	7.2e-85	46.8
WP_002809838.1\|1775766_1776279_+	DUF2141 domain-containing protein	NA	NA	NA	NA
WP_036497535.1\|1776323_1777235_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	2.7e-111	74.6
WP_011330422.1\|1777500_1777998_-\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2114575 : 2143516

Synechococcus_phage(25.0%)

tail,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147094443.1\|2114575_2116804_-\|tail	phage tail protein I	NA	NA	NA	NA
WP_002809796.1\|2116793_2117750_-	hypothetical protein	NA	NA	NA	NA
WP_011330781.1\|2117736_2118684_-	hypothetical protein	NA	NA	NA	NA
WP_002811532.1\|2118694_2120773_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_002809545.1\|2120744_2123987_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_002810469.1\|2123983_2124406_-	GPW/gp25 family protein	A0A0E3ETF4	Synechococcus_phage	5.8e-08	31.4
WP_002808915.1\|2124741_2125392_-	hypothetical protein	NA	NA	NA	NA
WP_002809011.1\|2125408_2126629_-	hypothetical protein	NA	NA	NA	NA
WP_002808938.1\|2126630_2127305_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_002811163.1\|2127316_2128249_-	hypothetical protein	NA	NA	NA	NA
WP_002811224.1\|2128390_2128756_-	hypothetical protein	NA	NA	NA	NA
WP_002810885.1\|2128808_2129249_-\|tail	phage tail protein	T2KSM5	uncultured_phage	3.9e-07	26.9
WP_011330783.1\|2129318_2131118_-\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	3.0e-37	34.2
WP_166485275.1\|2131114_2131279_-	hypothetical protein	NA	NA	NA	NA
WP_002808733.1\|2131307_2132189_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_011330784.1\|2132188_2135095_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_002808976.1\|2135096_2135771_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_002810821.1\|2135799_2137200_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_002811350.1\|2137196_2139560_-	ATP-binding protein	A0A0R6PCP6	Moraxella_phage	1.6e-25	30.5
WP_002809952.1\|2139692_2139950_-	hypothetical protein	NA	NA	NA	NA
WP_071414729.1\|2140583_2141624_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_147094444.1\|2142775_2142970_-	hypothetical protein	NA	NA	NA	NA
WP_081430972.1\|2143075_2143516_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2329571 : 2339987

Tupanvirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002809856.1\|2329571_2331200_-	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	3.3e-11	32.6
WP_002811754.1\|2332022_2334458_+	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	9.4e-18	33.3
WP_002809104.1\|2334507_2335113_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	9.8e-25	39.5
WP_002810166.1\|2335102_2336209_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2I2L4Y7	Orpheovirus	2.2e-38	32.7
WP_002808942.1\|2336215_2336872_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	8.1e-25	36.0
WP_002808953.1\|2336930_2338028_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	2.7e-49	37.0
WP_002808971.1\|2338194_2338719_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_002811316.1\|2338733_2339987_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	6.8e-97	50.9

DBSCAN-SWA_8

2527672 : 2587936

Virus_Rctr71(28.57%)

portal,transposase,integrase,protease

attL 2527109:2527126|attR 2588714:2588731

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2527109:2527126	attL	NA	NA	NA	NA
WP_002811500.1\|2527672_2528536_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_002809423.1\|2528647_2530450_-	hypothetical protein	NA	NA	NA	NA
WP_002809791.1\|2530497_2531664_-	hypothetical protein	NA	NA	NA	NA
WP_011330887.1\|2531710_2532040_-	hypothetical protein	NA	NA	NA	NA
WP_002808689.1\|2532071_2533274_-	hypothetical protein	NA	NA	NA	NA
WP_002811508.1\|2533326_2535738_-	hypothetical protein	NA	NA	NA	NA
WP_011330889.1\|2536268_2537993_+\|portal	portal protein	NA	NA	NA	NA
WP_011330890.1\|2538040_2538931_+	sulfotransferase family protein	NA	NA	NA	NA
WP_155814715.1\|2539431_2541375_+	DNA methylase	NA	NA	NA	NA
WP_002811547.1\|2541409_2541895_+	hypothetical protein	NA	NA	NA	NA
WP_011330892.1\|2541891_2542998_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1P8DJG9	Virus_Rctr71	3.0e-96	51.8
WP_011330893.1\|2543088_2543607_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_002811579.1\|2543711_2544602_-	alpha/beta hydrolase	A0A1V0SD13	Indivirus	1.1e-08	23.4
WP_002808612.1\|2544639_2546529_-	DUF4105 domain-containing protein	NA	NA	NA	NA
WP_002810928.1\|2546652_2547123_-	DUF3015 domain-containing protein	NA	NA	NA	NA
WP_002810632.1\|2547753_2547999_-	hypothetical protein	NA	NA	NA	NA
WP_011330895.1\|2548364_2549132_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_011330896.1\|2549374_2549827_-	PIN domain-containing protein	NA	NA	NA	NA
WP_011330897.1\|2549810_2550053_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_002810191.1\|2550192_2551644_-	bifunctional 2-methylcitrate dehydratase/aconitate hydratase	NA	NA	NA	NA
WP_002810615.1\|2551656_2552781_-	2-methylcitrate synthase	NA	NA	NA	NA
WP_002810778.1\|2552784_2553669_-	methylisocitrate lyase	NA	NA	NA	NA
WP_002809129.1\|2553887_2554337_-	universal stress protein	NA	NA	NA	NA
WP_011330898.1\|2554494_2555610_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1P8DJG9	Virus_Rctr71	1.7e-46	37.4
WP_002808593.1\|2555717_2556335_+	cyclase	NA	NA	NA	NA
WP_002810009.1\|2556355_2557579_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_011330899.1\|2557582_2558275_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-36	39.5
WP_002810604.1\|2558304_2559465_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_002811713.1\|2559466_2560633_+	ABC transporter permease	NA	NA	NA	NA
WP_011330900.1\|2560699_2561569_-	glutathione-dependent disulfide-bond oxidoreductase	NA	NA	NA	NA
WP_002810065.1\|2561974_2563258_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0R8V9X2	Thermobifida_phage	1.5e-75	43.8
WP_147094466.1\|2563363_2563636_+	hypothetical protein	NA	NA	NA	NA
WP_002808607.1\|2563943_2564882_+	hypothetical protein	NA	NA	NA	NA
WP_002808822.1\|2564884_2566918_+	CocE/NonD family hydrolase	NA	NA	NA	NA
WP_002810681.1\|2566975_2568040_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_002810338.1\|2568095_2568740_+	NfeD family protein	NA	NA	NA	NA
WP_002809537.1\|2568883_2569768_+	polyphosphate kinase 2 family protein	NA	NA	NA	NA
WP_002809445.1\|2569991_2572034_+	elongation factor G	NA	NA	NA	NA
WP_002810485.1\|2572073_2572415_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_002810030.1\|2572386_2573118_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_002809455.1\|2573227_2574019_+	DUF1499 domain-containing protein	NA	NA	NA	NA
WP_002810537.1\|2574114_2577720_-	DUF1631 family protein	NA	NA	NA	NA
WP_002809387.1\|2577887_2578616_+	hypothetical protein	NA	NA	NA	NA
WP_036497589.1\|2578626_2579643_+	polyprenyl synthetase	NA	NA	NA	NA
WP_002809961.1\|2579655_2580354_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_002811292.1\|2580486_2580792_+	hypothetical protein	NA	NA	NA	NA
WP_002808940.1\|2581501_2582245_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	4.8e-42	45.7
WP_002808810.1\|2582270_2582591_+	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_002810514.1\|2582651_2583272_-	hypothetical protein	NA	NA	NA	NA
WP_081430976.1\|2583287_2583650_-	hypothetical protein	NA	NA	NA	NA
WP_002809245.1\|2583931_2584633_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_081430977.1\|2584870_2585068_-	hypothetical protein	NA	NA	NA	NA
WP_002810553.1\|2585273_2585849_+	hypothetical protein	NA	NA	NA	NA
WP_011330904.1\|2585819_2586356_-	hypothetical protein	NA	NA	NA	NA
WP_002810512.1\|2586715_2587936_+\|integrase	integrase family protein	A0A0R6PHE0	Moraxella_phage	6.7e-57	33.4
2588714:2588731	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_007483

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_007484

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection