CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_007645	Hahella chejuensis KCTC 2396, complete sequence	5 crisprs	RT,WYL,Cas9_archaeal,DEDDh,csa3,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	2	18	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_007645_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007645_1

2010725-2010873

Orphan

Consensus_repeat	Method
CGAGTACAACGAACAGGGCCTGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_007645_1

>merge|NC_007645|1|2010725-2010873|CRISPRCasFinder
CGACTACAACGACGACGGCATGCCGGTGGCGATCACCAACGCCCTCGGCCATGTCTGGCGTCGCGAGTACAACGAACAGGGCCTGCTGGCCCGCATCACTGATCCGGAAGGCGCGCAGACCCAGTACGAATACAACGAACAGGGCCTGC

>NC_007645|1|1|2010725-2010873|CRISPRCasFinder
CGACTACAACGACGACGGCATGC	CGGTGGCGATCACCAACGCCCTCGGCCATGTCTGGCGTCG
CGAGTACAACGAACAGGGCCTGC	TGGCCCGCATCACTGATCCGGAAGGCGCGCAGACCCAGTA
CGAATACAACGAACAGGGCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007645.1\|WP_011395862.1\|1999916_2000504_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|372434
NC_007645.1\|WP_011395863.1\|2000565_2000868_-\|Dabb-family-protein	unknown	unknown	gnl\|CDD\|214884
NC_007645.1\|WP_148212525.1\|2015431_2016040_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_148212523.1\|2006995_2007403_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011395881.1\|2016855_2017635_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187604
NC_007645.1\|WP_011395878.1\|2014410_2014965_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011395875.1\|2013745_2014261_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011395884.1\|2019793_2020906_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|367920
NC_007645.1\|WP_041598527.1\|2016056_2016809_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|274729
NC_007645.1\|WP_011395868.1\|2005921_2006401_+\|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl\|CDD\|237976
NC_007645.1\|WP_011395861.1\|1999144_1999843_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_041598522.1\|2006485_2007025_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011395883.1\|2018640_2019477_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366132
NC_007645.1\|WP_011395865.1\|2001025_2002012_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NC_007645.1\|WP_011395867.1\|2004760_2005891_+\|ABC-2-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NC_007645.1\|WP_011395882.1\|2017995_2018577_+\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|133423
NC_007645.1\|WP_011395866.1\|2002008_2004759_+\|ribosome-associated-ATPase/putative-transporter-RbbA	unknown	unknown	gnl\|CDD\|224054
NC_007645.1\|WP_011395879.1\|2015102_2015435_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367234
NC_007645.1\|WP_011395872.1\|2007932_2008409_+\|macro-domain-containing-protein	unknown	unknown	gnl\|CDD\|394872
NC_007645.1\|WP_041598524.1\|2013286_2013742_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_007645.1\|WP_011395862.1\|1999916_2000504_+\|HD-domain-containing-protein	gnl\|CDD\|372434	pfam13023, HD_3, HD domain. HD domains are metal dependent phosphohydrolases.	1.74204e-58
NC_007645.1\|WP_011395863.1\|2000565_2000868_-\|Dabb-family-protein	gnl\|CDD\|214884	smart00886, Dabb, Stress responsive A/B Barrel Domain. The function of this domain is unknown, but it is upregulated in response to salt stress in Populus balsamifera (balsam poplar). It is also found at the C-terminus of a fructose 1,6-bisphosphate aldolase from Hydrogenophilus thermoluteolus.It is found in the pA01 plasmid, which encodes genes for molybdopterin uptake and degradation of plant alkaloid nicotine. The structure of one has been solved and the domain forms an alpha-beta barrel dimer. Although there is a clear duplication within the domain it is not obviously detectable in the sequence.	1.44195e-27
NC_007645.1\|WP_011395881.1\|2016855_2017635_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187604	cd05346, SDR_c5, classical (c) SDR, subgroup 5. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	7.41706e-121
NC_007645.1\|WP_011395884.1\|2019793_2020906_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|367920	pfam04389, Peptidase_M28, Peptidase family M28.	8.42641e-28
NC_007645.1\|WP_041598527.1\|2016056_2016809_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|274729	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	4.67831e-22
NC_007645.1\|WP_011395868.1\|2005921_2006401_+\|Cys-tRNA(Pro)-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	1.25196e-80
NC_007645.1\|WP_011395883.1\|2018640_2019477_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|366132	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3.	5.05045e-10
NC_007645.1\|WP_011395865.1\|2001025_2002012_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	8.80972e-35
NC_007645.1\|WP_011395867.1\|2004760_2005891_+\|ABC-2-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	9.22748e-25
NC_007645.1\|WP_011395866.1\|2002008_2004759_+\|ribosome-associated-ATPase/putative-transporter-RbbA	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.12732e-86
NC_007645.1\|WP_011395882.1\|2017995_2018577_+\|malate-dehydrogenase	gnl\|CDD\|133423	cd01338, MDH_choloroplast_like, Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	1.13454e-80
NC_007645.1\|WP_011395872.1\|2007932_2008409_+\|macro-domain-containing-protein	gnl\|CDD\|394872	cd02900, Macro_Appr_pase, macrodomain, Appr-1"-pase family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. The yeast protein Ymx7 and related proteins in this family contain a stand-alone macrodomain and may be specific phosphatases catalyzing the conversion of ADP-ribose-1"-monophosphate (Appr-1"-p) to ADP-ribose. Appr-1"-p is an intermediate in a metabolic pathway involved in pre-tRNA splicing.	1.50914e-34
NC_007645.1\|WP_011395879.1\|2015102_2015435_+\|hypothetical-protein	gnl\|CDD\|367234	pfam02893, GRAM, GRAM domain. The GRAM domain is found in in glucosyltransferases, myotubularins and other putative membrane-associated proteins. Note the alignment is lacking the last two beta strands and alpha helix.	2.50902e-06

>NC_007645.1|WP_011395872.1|2007932_2008409_+|macro-domain-containing-protein
MQLKCDALVSPSNSFGEMSGGLDKAIDDFYNGQAQTKASAAIRQEYLGELPVGAGLALDMRAQQFPVLILAPTMRVPGNVSATLNAYLAMRGLLLALARYNAKTERKIRNIAIPSLCTGVGGMDAVESATQMRAAFDNVVLRGWENVRHPAMAPFANR
>NC_007645.1|WP_148212523.1|2006995_2007403_-|hypothetical-protein
MLQQLEQIIEKNSDYSDFYILTMAIRRLEEQTPECQETADMFSEYGSFITLLPRIKIPLRPSPTEHYFKQRRHRAETIANIYKNKGTDTAIAYIKSLPVQEEDMDYKEWLRLQALREEHQHKNSSFLAKLLHHTT
>NC_007645.1|WP_041598522.1|2006485_2007025_+|hypothetical-protein
MYRKAMPKCEVKGALDPVLFSHMGIEELIPAKCAKCEYFLEGECLRAEEQIGGYLPLDYGACRVNGSCIPVQIESSRFYIPEKCVGCSFLAGETQSGYQCLQDKEIWKKGKPLDWGEWTPDLPNIGYAGLNIDESVLEAVKNGAEVFVIKRLRLLNNNLTLKFCRQAYADLRCMMEKFG
>NC_007645.1|WP_011395868.1|2005921_2006401_+|Cys-tRNA(Pro)-deacylase
MTPAINQAKKAKITYQVHEYAHDPRSESYGEEAAQAMGAPPERVFKTLLVSLTGGAQKLAVGIVPVSGKLDLKAVAKALGAKKAEMADPKEAERATGYIVGGISPLGQKKRLPTVLDDTSLNYATIFVSAGKRGLEIELAPQDLLSLTGGVSAAIGVSD
>NC_007645.1|WP_011395867.1|2004760_2005891_+|ABC-2-transporter-permease
MSSKLANIRRLGIKEIRSFLHDRALLIFVLAAFTIIVYSAATAASRELHNAPIAIVDEDQSQLSLRVANAFYPPHFKEPELISYADVDAGMDEGRYTFVVVIPSGLQKDVMAGASSDMQVNIDATAMTQAFIGATYIRSIVTAEVNEFVSGRRDEAALPIEQNVRVMFNPNLTGYWFGGVMEIISQITLLSIILTGAALIREKEHGTLEHLLVMPLSPLEIMAAKVWSNGLVVLLGAAMSLYVVIQGVLDVPIAGSVPLFLLGVALHLFSTTSMGIFLGTVARSMPQLGLLIILVILPMQLLSGGITPRESMPDIVQYIMLAAPTTHFVSFAQAIIYRSAGFSAVWPQFLAITVIGLALFLAALGRFRKMVETTQS
>NC_007645.1|WP_011395866.1|2002008_2004759_+|ribosome-associated-ATPase/putative-transporter-RbbA
MSPAAPVVEINGLEHRYGDLIALQTLSLNIPAGVIAGIIGPDGVGKSSLLNLISGAARIQCGSVSVLGGDISDDNVRDELSPRIAYMPQGLGKNLYFSLSVFENVDFFGRLFGLDRRERHHRINTLLRSTGLSRFRERPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRQFWRLIDALRGADGRMSVLVSTAYMDEAERFDWLVAMDQGRILATGAPAELKAQTGASNLDEAFIRLLPEESRKGHRELTIAPWRELSPVPAIEAQGLVKRFGAFTAVDQVSFSIRQGEIFGFIGSNGCGKTTTMKMLTGLSPPTSGVVRLFGAEMEPNDLAAKKNVGYMSQSFSLYAELTVRQNLMLHAKIFGLDARQSKIRTQELLNDFGLQAYEDEFAESLPLGIRQRLSLAVAVVHKPKILILDEPTSGVDPVARDRFWEHLIQLSRQDGVTIFISTHFMNEGERCDRVSLMHAGKVLACDSPQNIVAQREAESFEEAFVSCLSEAAGDGQEAETNAPEDSPAAEAAAPERSGKFLAQGFNVRRMLAYAHRESLEFLRDPIRLTFALLGSVILMFVLGYGVSLDVEDLAFAVYDQDQTPESRDYVQYLAGSRYFIQQPQAATYDEVDRRMRSGELSFVVEIPSGYGRDVKRGRQTGVAVWLDGAMPFRGETIKGYLSAAHYAYLGDLAIRSLGSAPALSPVNLEMRYRYNQDFRSIYAMVPAVIPMLLIFIPAILMALAVVREKELGSIVNLYVTPVTRLEFLLGKQAPYILVSMISFLLLVAQSVFFFDVPIKGSFAALCFAALLYVIATTGLGLLVSSFTRTQIAALAGTALATLVPAVQFSGMTDPVSSLEGAGAWIGSLYPTTYFLIISRGTFTKALEFADLYYYFLILAAFIPVITALSVLTLKKQGR
>NC_007645.1|WP_011395865.1|2001025_2002012_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MNSESQKKWIRFLAPALLLAAAGFAYMAYQPESLPDSIARGNGRLEAQEIDVATKLPGRVEAVLAEEGEMVKAGQVLARINVDDLQAELRQAQATLRQVQESAKYAEAVVDQYESELSFAEKELARSSQLSQKGHVSAEKLDLDKTSKLRAEAALKAARIKVVEAQAAIEAAQAAIERLHANIAESELKAPIDARVLYRLAEPGEVLGSGGKVLALLDLTDVYMTIFLPTYQAGVLSVGADARVVVDALPDLRIPAKVSYVAPRAQFTPKQVETQTEREKLMFRVKVKIDPDLLKAHQEKVKTGVTGVAYVKLEDDVEWPEDLQVRLQ
>NC_007645.1|WP_011395863.1|2000565_2000868_-|Dabb-family-protein
MIRHFVFVKFKDSLSDADVAEMVRLFARMADEIDEVAAFEYGPNNSTEGLTKGLEHCFNLTFATVADRDAYLPHPKHEAFKDVFVPTIADVMVFDYEVAE
>NC_007645.1|WP_011395862.1|1999916_2000504_+|HD-domain-containing-protein
MLQSDIHGVLEFLRGAEQLKNVIRSAWTSAGRKESTAEHTWRLCLMAMVFEKALPELDFAKLLKICIIHDLGEAISGDIPATEQSPDVDKSIQERQDLLQLLEPLPEHLQQDILALWDDYDQMQSLEAKVAKALDKMETILQHNQGKNPQDFDYAFNLEYGKKYANIDPFIQQLRDIVDQETLERSQSPRKGSPE
>NC_007645.1|WP_011395861.1|1999144_1999843_+|hypothetical-protein
MKTVLTIRSVAMALALITTLAAAEDDLASCDSDVIKWFSSKNYEAGDLTFYDGVWYRSRMRHSGMQPGIGFTWEKLDLPPCESILKAAGDESTTEQDQSHSAMGTENRLPVDAQTVEDVPARAETDGASTLTPEPAVDHSVEVQVEDVGSDDWREKESLISQIKNLLSPEPESNGLKCADIKPWSFAQSYYVSDLVSYKGHYYSAIRNSNGGYPDSMQTPPSWKPIELDCGD
>NC_007645.1|WP_041598524.1|2013286_2013742_+|hypothetical-protein
MNLFLGLIMKKMDFILNKIKVNGFCEGDECHQLFSLLTMSLAQKLGVKILFDVQPITNNYIVGCIGYTAESSFGCLDVSLLVNVIVNCCGDRPSIIADVMVYSGSVRLDQTYGFKHFSHFEYDYESSGEWIFIGWKADEYGGYDSFRQLDE
>NC_007645.1|WP_011395875.1|2013745_2014261_+|hypothetical-protein
MILFYAVDGIFAVNVGKRLENNIILGAVLNIVIDAINRIKERRFWVIPPYAYDWDEDEKSVEDYVDYYRRNIDCCICDAMAYRNSLFEFENVLSEESLSVVLDMRKRFISTFPFCDDKFDLYEDIGSDRCNSLYLQMRNSYYEFAGDDSISHIDRYIDNLVCIKEYMQDNP
>NC_007645.1|WP_011395878.1|2014410_2014965_+|hypothetical-protein
MINKLRNETKYPLSLINKAVDMSSGYEEAKLFFENEINKNLDVIKRSLCITEDEAVYAYEYYGLSLERCIDEERKKSLPVTIETKIRSISSRLKNGDLLVGEVYGLSEDCYYWVTAQKKGDEYIVCLIGFRKSDVENCLDLIYSDAVEFLQKIFLCEDDAIKGIEEYVDIFEFDTRKAYEKFPL
>NC_007645.1|WP_011395879.1|2015102_2015435_+|hypothetical-protein
MIHLTHGEDILKEGVANLQKSVETVGGKLYLTNQRLVFRAHALNVQGGVTEIPLAQVCKLTKCWTKLFGVIPLYPNSLAISTHDNAVFRFVLFGRDSWRAAIAERIGTRA
>NC_007645.1|WP_148212525.1|2015431_2016040_+|hypothetical-protein
MKWVFRALRAVWVGLILLVVLALFYPSIFPQEALHQTRMLLQSLPVSPEYIFGAVVICLLIIMWPLVSYSLAKKSGWKKLAEIYKSETNPTKERFSGIGSGKVGDVSYSNILSICADERYLYLKTFLLFRLGHPTLAIPWSDISEIRPTTSLLPAGAPQFLQAISPSGRFAKVELSTMPEQQLILPWDERFSRFSSSLIVSN
>NC_007645.1|WP_041598527.1|2016056_2016809_+|alpha/beta-fold-hydrolase
MPITTNVVMIHGLMGSLSYFEPQKRVPDLRWLTPDLPGYGATPMQDGGEGFSLRGQAEHVRDLILNLDEGPCWVLGHSVGGAIAMMLAEAHPELVRGLISVEGNFTLNDAFWCRKVAAMSVSEWRASYSEMQSDPEAWLTRAEIEPTVERLEWARRILVNQSTDTVHAVANAVVRETAGAEYQDSIRRVVDSGLPLYLLSGERSDAGWDVPEYVRATALQSVRQKNTGHMMMLEAPDEFCAIVADFIRFS
>NC_007645.1|WP_011395881.1|2016855_2017635_-|SDR-family-NAD(P)-dependent-oxidoreductase
MSKPGNHNRKVALVTGASVGLGEAIAERLAQEGYDLILLARRQDKLEALAARLSTNCHIIACDICDQDAVTKSIEDLPPAFANIELLVNNAGLALGLGPAQNVSWEDWSRMIEVNCTGLAFMTHLLLPGMVERNAGHIINIGSIAGSYAYFGGNVYGATKAFVEQFSRNLKADLLGTALRVTNIEPGMVGGSEFSLVRFKGDEDKVKATYENADALTPEHIADCVAWAATRPANVNINRIEVMPVCQAPERLAIHRAKS
>NC_007645.1|WP_011395882.1|2017995_2018577_+|malate-dehydrogenase
MDRMQQLQENPSIFVEQGKALGKVAKDTVKTLVVGNPANTNALIAWANARYLPHHQFSALMRLDHNRALGFLSRKIGINPRRIKRLTIWGNHASTLFPDASHLRIDGQPIRMALDMNWYRDIMIDQVQQRGTAVISCKGRTSSSSAAQAIIDHLRDWRFGTEEGDFVSMGVLSQGDRKPVADVAGATVGARPL
>NC_007645.1|WP_011395883.1|2018640_2019477_-|transporter-substrate-binding-domain-containing-protein
MRAQMTSQWFKILVVSFALIGASGAARTETGIVEISVCGIDVANPPIYRLTMADTKETTEYKGVAYEMLNEIELQASIRIIFERRPWKRCLAQLQSGQSDAVIGSSYVQEREQFSHYPRKLNGSVDYSKLVYSNTLWIYTSDPAVQWDGVSLKLPPGAQAAAGLGYSSADLLQRMGVEVIERYEPKHLANLLASRRVAIVASYAMQVEPYLDLSDPNSPVRRLPTPLMQDDMFLVFSRPFYARHQHLAERIWEICEDLHESGRYDEILALYFSFLDSQ
>NC_007645.1|WP_011395884.1|2019793_2020906_+|M20/M25/M40-family-metallo-hydrolase
MFPEISTKKLLPGLACLMLATGCSNNNDSNDGGSNANKSADDYLVDLAHPTKGIGARVAGTESERKAEAYLLAELKSLGYAPSAQAFTYKDRDNNEFNSSNVIFEKAGSNADKVLVLGAHYDTAGEDLGSTGATDNGTGVSTLLDVAKRIKDKTLPYTLRFVFFGAEEKGLHGSNYYVSQLSVDDLSKIVGMVNYDTVAGGDYLYVHSADSATPYECSGDNSSYAAGDTVRKGMLNASIALDGDNDFLIHPSVDGGYQAGETGDWSDHVAFACRGIPIAYVEATNFDIDGKYGKDGYSQTVNPQFWTCFDEATVGACDKDAEVKWGEIWHTGSDRIDAMESAFPGRVSSQMEQAVKATVEFVSFADYYLP

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Crispr_ID: NC_007645_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007645_2

2905515-2907663

TypeI

I-C

Consensus_repeat	Method
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	PILER-CR
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CRT

32 spacers

cas3,cas5,cas8c,cas7,cas4,cas1,cas2

The CRISPR arrays of NC_007645_2

>merge|NC_007645|2|2905515-2907663|PILER-CR,CRISPRCasFinder,CRT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAACCACCGTACAAGCAACATGCCGTGGACTGAGCACAGGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGTCGCCCCACCACGGCCAGCCGAAAAGGTTAGCCGGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTTCAACGTCTCGCTGGTTAGCGCAATGAATACGGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGACCGATATCACACAAATCACTGCACCTAACGTAGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGGGCGACTCGCATGTGTGGTACTACAGAGGCAAGGGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTCGATAACCTATAGCGGAGTGTGCGATGAGCGCAGGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTGAACGTGATATGCGGACTCAGAGATGATCCGTGTCGCCTCCCACGCGGAGGCGTGGATTGAAACCAGCTTTGCGTTGTGGTATTTGATGATATTTTCAGGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTTGCTACAACAGCTGGCTGGTCCATTCTTGTTGGGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGTGAGGATAGACAACCTGATAGACGGTTTTTTACGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGCGAAAAAATACCGGCGATACTTGGGGCCGGCCGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTCATCCGGCGACAGCTCCCACACCGAGAACGGCATGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTGGTCGCCGCTGTTGACGTTCAGGGTGGGGACTAGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTTAGGTCGCCACCCTTGCGCTTACCCCACGGACAGTCGCCTCCCACGCGGAGGCGTGGATTGAAACCAAATCAGCGCGGCGGCACCATCAGGGCGAAAATGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTCCGTCCAGCGCTGATTCTCGTTTCCATTTTGGCGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTCGGTAGACAACATCCCCAAACTATCCAATACGCGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTGCTATCGGGTTGTTGATAATCCTGATGTTATGAGTCGCCTCCCACGCGGAGGCGTGGATTGAAACATACAAACTCTCCGCTTGTTGCTGTAGCGCTGCCGTCGCCTCCCACGCGGAGGCGTGGATTGAAACAACATGGCTTATGGCCAAGGCCTGGATGATTATTGTCGCCTCCCACGCGGAGGCGTGGATTGAAACAGATTCCCCGTTGGCTTTGGACAAATAACCCGCCGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGGTAGTGTAAACGTCCTTGCCACCTTTCTAGGTATGTCGCCTCCCACGCGGAGGCGTGGATTGAAACACTGAGAGCGACATAGCGGACATGCTCGGTTACAGTCGCCTCCCACGCGGAGGCGTGGATTGAAACACGGTTACGGATGTAAGCTCACCTGCAATTCTCGTCGCCTCCCACGCGGAGGCGTGGATTGAAACATATCGCCGGACTGCTCGCCCAGCGTCAGGTGCGTCGCCTCCCACGCGGAGGCGTGGATTGAAACAATAAATGACGCGTAAAGTTTGTCAGGCACCTGAGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGTAACCTGTCATCGTCACCGATCCGTCACAGCGAGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGCCGCGCAAGTAGTTCCCATATTGGCCCGTCATGGGTCGCCTCCCACGCGGAGGCGTGGATTGAAACTCGGCCTCGCTCATGTCAGGCGGGAAATAGTCCGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGGCAAGTTTTCGTCTATCCAGTCCTGATCAAACTGTCGCCTCCCACGCGGAGGCGTGGATTGAAACCGGCCTTCCGGAGGATTACGAGGGGCGAGGATGATGTCGCCTCCCACGCGGAGGCGTGGATTGAAACGTAACGTAAGCCCGCACCCATAGAGCTAGGCAACGGGTCGCCTCACACGCGGAGGCGGGGATTGAAAC

>NC_007645|2|1|2905515-2907663|PILER-CR
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CACCGTACAAGCAACATGCCGTGGACTGAGCACAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTCGCCCCACCACGGCCAGCCGAAAAGGTTAGCCG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTCAACGTCTCGCTGGTTAGCGCAATGAATACG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GACCGATATCACACAAATCACTGCACCTAACGTA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGGCGACTCGCATGTGTGGTACTACAGAGGCAAGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGATAACCTATAGCGGAGTGTGCGATGAGCGCAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGAACGTGATATGCGGACTCAGAGATGATCCGT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CAGCTTTGCGTTGTGGTATTTGATGATATTTTCAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTGCTACAACAGCTGGCTGGTCCATTCTTGTTGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTGAGGATAGACAACCTGATAGACGGTTTTTTAC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GCGAAAAAATACCGGCGATACTTGGGGCCGGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCATCCGGCGACAGCTCCCACACCGAGAACGGCAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGGTCGCCGCTGTTGACGTTCAGGGTGGGGACTA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTAGGTCGCCACCCTTGCGCTTACCCCACGGACA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CAAATCAGCGCGGCGGCACCATCAGGGCGAAAAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCCGTCCAGCGCTGATTCTCGTTTCCATTTTGGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGGTAGACAACATCCCCAAACTATCCAATACGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGCTATCGGGTTGTTGATAATCCTGATGTTATGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ATACAAACTCTCCGCTTGTTGCTGTAGCGCTGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AACATGGCTTATGGCCAAGGCCTGGATGATTATT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AGATTCCCCGTTGGCTTTGGACAAATAACCCGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGTAGTGTAAACGTCCTTGCCACCTTTCTAGGTAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ACTGAGAGCGACATAGCGGACATGCTCGGTTACA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ACGGTTACGGATGTAAGCTCACCTGCAATTCTC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ATATCGCCGGACTGCTCGCCCAGCGTCAGGTGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AATAAATGACGCGTAAAGTTTGTCAGGCACCTGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTAACCTGTCATCGTCACCGATCCGTCACAGCGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GCCGCGCAAGTAGTTCCCATATTGGCCCGTCATGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGGCCTCGCTCATGTCAGGCGGGAAATAGTCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGCAAGTTTTCGTCTATCCAGTCCTGATCAAACT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CGGCCTTCCGGAGGATTACGAGGGGCGAGGATGAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTAACGTAAGCCCGCACCCATAGAGCTAGGCAACGG
GTCGCCTCACACGCGGAGGCGGGGATTGAAAC

>NC_007645|2|2|2905515-2907663|CRISPRCasFinder
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CACCGTACAAGCAACATGCCGTGGACTGAGCACAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTCGCCCCACCACGGCCAGCCGAAAAGGTTAGCCG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTCAACGTCTCGCTGGTTAGCGCAATGAATACG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GACCGATATCACACAAATCACTGCACCTAACGTA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGGCGACTCGCATGTGTGGTACTACAGAGGCAAGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGATAACCTATAGCGGAGTGTGCGATGAGCGCAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGAACGTGATATGCGGACTCAGAGATGATCCGT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CAGCTTTGCGTTGTGGTATTTGATGATATTTTCAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTGCTACAACAGCTGGCTGGTCCATTCTTGTTGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTGAGGATAGACAACCTGATAGACGGTTTTTTAC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GCGAAAAAATACCGGCGATACTTGGGGCCGGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCATCCGGCGACAGCTCCCACACCGAGAACGGCAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGGTCGCCGCTGTTGACGTTCAGGGTGGGGACTA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTAGGTCGCCACCCTTGCGCTTACCCCACGGACA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CAAATCAGCGCGGCGGCACCATCAGGGCGAAAAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCCGTCCAGCGCTGATTCTCGTTTCCATTTTGGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGGTAGACAACATCCCCAAACTATCCAATACGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGCTATCGGGTTGTTGATAATCCTGATGTTATGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ATACAAACTCTCCGCTTGTTGCTGTAGCGCTGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AACATGGCTTATGGCCAAGGCCTGGATGATTATT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AGATTCCCCGTTGGCTTTGGACAAATAACCCGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGTAGTGTAAACGTCCTTGCCACCTTTCTAGGTAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ACTGAGAGCGACATAGCGGACATGCTCGGTTACA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ACGGTTACGGATGTAAGCTCACCTGCAATTCTC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ATATCGCCGGACTGCTCGCCCAGCGTCAGGTGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AATAAATGACGCGTAAAGTTTGTCAGGCACCTGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTAACCTGTCATCGTCACCGATCCGTCACAGCGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GCCGCGCAAGTAGTTCCCATATTGGCCCGTCATGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGGCCTCGCTCATGTCAGGCGGGAAATAGTCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGCAAGTTTTCGTCTATCCAGTCCTGATCAAACT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CGGCCTTCCGGAGGATTACGAGGGGCGAGGATGAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTAACGTAAGCCCGCACCCATAGAGCTAGGCAACGG
GTCGCCTCACACGCGGAGGCGGGGATTGAAAC

>NC_007645|2|1|2905515-2907663|CRT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CACCGTACAAGCAACATGCCGTGGACTGAGCACAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTCGCCCCACCACGGCCAGCCGAAAAGGTTAGCCG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTCAACGTCTCGCTGGTTAGCGCAATGAATACG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GACCGATATCACACAAATCACTGCACCTAACGTA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGGCGACTCGCATGTGTGGTACTACAGAGGCAAGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGATAACCTATAGCGGAGTGTGCGATGAGCGCAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGAACGTGATATGCGGACTCAGAGATGATCCGT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CAGCTTTGCGTTGTGGTATTTGATGATATTTTCAG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTGCTACAACAGCTGGCTGGTCCATTCTTGTTGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTGAGGATAGACAACCTGATAGACGGTTTTTTAC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GCGAAAAAATACCGGCGATACTTGGGGCCGGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCATCCGGCGACAGCTCCCACACCGAGAACGGCAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGGTCGCCGCTGTTGACGTTCAGGGTGGGGACTA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TTAGGTCGCCACCCTTGCGCTTACCCCACGGACA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CAAATCAGCGCGGCGGCACCATCAGGGCGAAAAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCCGTCCAGCGCTGATTCTCGTTTCCATTTTGGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGGTAGACAACATCCCCAAACTATCCAATACGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TGCTATCGGGTTGTTGATAATCCTGATGTTATGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ATACAAACTCTCCGCTTGTTGCTGTAGCGCTGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AACATGGCTTATGGCCAAGGCCTGGATGATTATT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AGATTCCCCGTTGGCTTTGGACAAATAACCCGCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGTAGTGTAAACGTCCTTGCCACCTTTCTAGGTAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ACTGAGAGCGACATAGCGGACATGCTCGGTTACA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ACGGTTACGGATGTAAGCTCACCTGCAATTCTC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	ATATCGCCGGACTGCTCGCCCAGCGTCAGGTGC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	AATAAATGACGCGTAAAGTTTGTCAGGCACCTGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTAACCTGTCATCGTCACCGATCCGTCACAGCGA
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GCCGCGCAAGTAGTTCCCATATTGGCCCGTCATGG
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	TCGGCCTCGCTCATGTCAGGCGGGAAATAGTCC
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GGCAAGTTTTCGTCTATCCAGTCCTGATCAAACT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	CGGCCTTCCGGAGGATTACGAGGGGCGAGGATGAT
GTCGCCTCCCACGCGGAGGCGTGGATTGAAAC	GTAACGTAAGCCCGCACCCATAGAGCTAGGCAACGG
GTCGCCTCACACGCGGAGGCGGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007645.1\|WP_011396647.1\|2894322_2895540_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NC_007645.1\|WP_011396660.1\|2909786_2912018_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_007645.1\|WP_011396645.1\|2891969_2892929_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NC_007645.1\|WP_011396658.1\|2907997_2908765_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396661.1\|2912056_2912725_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NC_007645.1\|WP_049780940.1\|2898109_2899216_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259799
NC_007645.1\|WP_011396662.1\|2912721_2914500_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|187887
NC_007645.1\|WP_158304957.1\|2921592_2921823_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396653.1\|2901483_2902383_+\|cupin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|372651
NC_007645.1\|WP_011396651.1\|2899326_2901003_-\|cyclic-peptide-export-ABC-transporter	unknown	unknown	gnl\|CDD\|226968
NC_007645.1\|WP_011396665.1\|2916010_2917027_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_007645.1\|WP_011396655.1\|2903430_2905215_+\|carbamoyltransferase	unknown	unknown	gnl\|CDD\|225103
NC_007645.1\|WP_011396654.1\|2902494_2903409_+\|cupin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|372651
NC_007645.1\|WP_011396659.1\|2908992_2909460_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_148212557.1\|2895762_2896629_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366132
NC_007645.1\|WP_011396664.1\|2915399_2916014_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_007645.1\|WP_011396649.1\|2896843_2898094_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270308
NC_007645.1\|WP_011396646.1\|2893001_2894186_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NC_007645.1\|WP_011396666.1\|2917031_2917325_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_007645.1\|WP_011396663.1\|2914496_2915390_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458

Protein	Function_ID	Function_description	E-value
NC_007645.1\|WP_011396647.1\|2894322_2895540_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	2.92612e-119
NC_007645.1\|WP_011396660.1\|2909786_2912018_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.16548e-56
NC_007645.1\|WP_011396645.1\|2891969_2892929_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.20966e-09
NC_007645.1\|WP_011396661.1\|2912056_2912725_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	7.70734e-123
NC_007645.1\|WP_049780940.1\|2898109_2899216_-\|hypothetical-protein	gnl\|CDD\|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	1.59597e-54
NC_007645.1\|WP_011396662.1\|2912721_2914500_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0
NC_007645.1\|WP_011396653.1\|2901483_2902383_+\|cupin-like-domain-containing-protein	gnl\|CDD\|372651	pfam13621, Cupin_8, Cupin-like domain. This cupin like domain shares similarity to the JmjC domain.	3.33575e-34
NC_007645.1\|WP_011396651.1\|2899326_2901003_-\|cyclic-peptide-export-ABC-transporter	gnl\|CDD\|226968	COG4615, PvdE, ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	1.10913e-115
NC_007645.1\|WP_011396665.1\|2916010_2917027_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_007645.1\|WP_011396655.1\|2903430_2905215_+\|carbamoyltransferase	gnl\|CDD\|225103	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones].	1.39585e-151
NC_007645.1\|WP_011396654.1\|2902494_2903409_+\|cupin-like-domain-containing-protein	gnl\|CDD\|372651	pfam13621, Cupin_8, Cupin-like domain. This cupin like domain shares similarity to the JmjC domain.	5.17717e-44
NC_007645.1\|WP_148212557.1\|2895762_2896629_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|366132	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3.	1.31889e-28
NC_007645.1\|WP_011396664.1\|2915399_2916014_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.37748e-44
NC_007645.1\|WP_011396649.1\|2896843_2898094_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.518e-86
NC_007645.1\|WP_011396646.1\|2893001_2894186_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NC_007645.1\|WP_011396666.1\|2917031_2917325_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.4759e-31
NC_007645.1\|WP_011396663.1\|2914496_2915390_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	7.13257e-157

>NC_007645.1|WP_011396655.1|2903430_2905215_+|carbamoyltransferase
MSKPIYVLGTGLSHDGSACLLKDGEVCVAIEKERITRIKHDGFCDSEAMQYCLDAEGIGFDDVAVVVQNANFSNFDRGNKIFHGQPRIIPDHVKTVTISHHMAHAYSVVGTSPFDDMAVLVIDGCGSSWDDCLDLDGAQVPEVQPGADFNHLFFEKDSYYLYEKGKLRPVYKDFSPFGYFLKGYSMCPPTTKHSIGGLYSGVSQYVFQGMEDPGKLMGLAPYGRPDVYDFQAFDCRNGRVFVNYDWMKHFDRPRVRYEDLAENFDYYADIAYWMQREIERALLYLVNHRFEHQPHKNLGYAGGVALNAVANAKLLKQTGFEDFYFQPAAADNGLAIGCAYYGWLEVLGQERIKHDASPYFGKSYDAEQLYPAMQAYAGKISYRRLPEDEAINRTAELLAAGKVVAWFEKGSEFGPRALGHRSILADPRNPDIREHINRNVKFREDFRPFAPSVPLEKAGVYFDCDYPSPYMILVAPTREEWKKEIPAVVHADGSARVQTVTESVSPNYYRLLNKFGELTGVSVLLNTSFNKKGMPIVETPKEALDFFMECALDALVIDGCLIEKTAVAQQTRKVDEKKEWEKGLGSLYPENVGI
>NC_007645.1|WP_011396654.1|2902494_2903409_+|cupin-like-domain-containing-protein
MNKEKSYGLQSEIERLDAGDSERFAALCQESSKPVILTGGALAWPALQKWSPDYFRRRFASQRVRPSLQLPAYGAPYFSTEKHHRREMYLSEFVDILESGDACYVDQTDVHSFIGLEEDYRYQQFIPPGLNFISLWIGSKTRSGLHYDNMDNLFVQVYGEKKAILLAPREARNLYPFGDCISKSRVDPERPDLMHYPRFAKAQTLTARLQPGDILFFPRGWWHHFSSAGPSISLSCWYGAPLTIAEQARGVNLAGRHLWFRILRDFLWHGVLGRAYNQRLFSTPPTGKLLYDLLFAPKRLTKTE
>NC_007645.1|WP_011396653.1|2901483_2902383_+|cupin-like-domain-containing-protein
MEKLADVEACPVDRLDISQITPQLFHSEYRRKSRPLIITGALSDAKNWSLEFMCREVGDRKFPVRCYGPGHFNKPKSEWSKYCDYQEMKLSDYALQLTSDYARKNNHYMGQVAIGDTPLANVLRGALGNISERCDMQKATDMFLWLGPSGHTEPLHWDCGEGTVLMLHGAKKVVLFPPEQSENLYPFSLYGSPAAPWFSKVYVAKPDYDAYPKLREAMKHKIELVLRKGEVLFIPVYWWHELSSIGKDFYTCSVNRFWRVKPFSRLTSNKLGLALYLSQLGLMTVNGVIDGLRRPADVV
>NC_007645.1|WP_011396651.1|2899326_2901003_-|cyclic-peptide-export-ABC-transporter
MEFLNFIKREHADFNYYALAMVVVSGMLNGVIAVIVIHAAQHAAPHELNFRYLLMFAVALAAFWLSKRYTLNYNTTQVEHVLERIRTRIADKIRKTDLRAFEKVGRGRMYSVLNTETLTLSQYTPFIINAIGSFVMVIFALMFIAYVSTTALLLTVLTTSLCLFYFFARQRVLNRKLHMASEKQNEYFDALGELLDGFKELKINPSKSNCFYQERLLPLSNSMETLKIETGLAYNNLNVFTQSFTFILMASVIFLIPMISASSTESIPKLAAIMLFVIGPLSEIVGVAPLIAKSNVAIVNIQRLETELDGLRSIESDQLEHFSDAESLAQNQEAPFQEIRCDHLKFSYNENGLPGPGQAKGFTVGPIDLTIKRGEIIFMVGGNGSGKSTFLKLLTALYKPDEGGIQMDGQPLHANNMLQYRSLYSVIFSDFHLFKHLYGVDVKDRSKVSRLLELMKLSERCQIKDNEISDIKLSTGQKKRMALIVSLLEDKQIYVFDEWAADQDPDFRRYFYETILPEMKAQGKTIIAATHDDHYFDVADRVIKLDAGKIITNPGLHI
>NC_007645.1|WP_049780940.1|2898109_2899216_-|hypothetical-protein
MTRWRPFWRRAKVPLIVLFFIILFLVAYLFHRIFINIYPGEAGVLWKRFDDGVEQRVYGGGLHIINPFNIMYKYEVRVQQRETIFTVLSKNGLLIRVRASVRFSPNRKTLYLLHEYVGPEYIDRVVIPETQAIIRRVLGEYEPDDIYATQGNIIQNIVLMALTELQQRHIVLDDLLIKEIHLPDTVASAIETKLEEEQKALAYTYILEREQLEIQRKQFESLGIQQFQKNVNEGLTPEYLRYQGIRATLELAKSNNAKLVVIGGSGTDGLPLILNTGGEASTAAATNAPVGISNLSSVFASSVKSVGAGVDQSDISTPLTTPAPKTRTSDPSAPTNAILSSTSSAKPSAKNLGEGIEQRQEAIGVAVD
>NC_007645.1|WP_011396649.1|2896843_2898094_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MKKHGTLFFLVVFTAIMALMVGVYWQEIERGVDANDTLALGGTKMKYRETLKVLLWRGYIPDSVHKKIQQDLNINIEVTTFDSDAEFKKHLNLHGNDDKNPSDPEIPFDIIMPTDYMVLSLAEKGLIEKINYDEIPNYRNIAMNLRRQDFARSLFDYSVPYIYGSLGIGYNYWEIGNIVFNWKMLFEPKSNTSLKGLISISPDARISLGIALLAMGKSPNSRDEDDVKQAGEYLKEAIAKYDIRMMNSGMGDMLASQDLLLTMAWSGEIAEALNEDPDASGVNSLAAKIVRFSLPDEGALVYFDALAIPNTSTKQALALKYINSLLDPFISADVTNHSYFATVNEQAEPYVKTEIVNGPAYFLPTSSGPVFIRQYLGDDEKIYDTVWRDVTRFYFEHLRKQNYYKTERSQHQLWKF
>NC_007645.1|WP_148212557.1|2895762_2896629_+|transporter-substrate-binding-domain-containing-protein
MSPVKVFKLVAALMLSLLFLAAPAHSACSKSLVINQANWKPYMYVKENGELAGLDYELVKAILDLAGCEYTFVRIPSKRALLELEKGRVDMVAGASITPEREMYGRFTVSYRDETMVIFVRKEQQNYFPASTLNDLLNNHQLIFGAVIGAYYGAEYELLDHASLAKNNRLILMKDNERLLDLLVLNRLDAIAGDRVSLSVMAKALGIADKVAIHDHLLNQDFVHFLLSKKSTTPQDREVVNTAIQTFVKSDEYKYILSRYGLEPYTRPGSDKVLHEFYLDQLEKVEQN
>NC_007645.1|WP_011396647.1|2894322_2895540_-|GTP-binding-protein
MRKLPVTVLSGFLGAGKTTLLNHILQNRDGLKVAVIVNDMSEINIDASQVNREVNLNRAEEKLVEMSNGCICCTLREDLLQEVSRLARENRFDYLVIESTGVSEPLPVAETFTFRDEHGVSLADIARLDTLVTVVDGVNFMRDYENAETLQEVGESLGAEDERNVAELLVDQIEFSDVLVVSKLDLISQAEREELFSVLRKLNPEADIVPALMGQTPLSKVLNTGRFDFERAARAPGWLQELRGEHTPETEEYGIGSISYRARRPFHPQRFHQFLEREWNNGRLLRSKGYFWLASRPYEAGGWSQAGGVMRYSYAGLFWAGAPQEYWPQDEESLRLIRNNWLEPYGDRRQELVFIGQGIDWDRLRSELDACLLTDEELAQGEKVWVNYPDPLPIWRSFQDERESA
>NC_007645.1|WP_011396646.1|2893001_2894186_+|aspartate/tyrosine/aromatic-aminotransferase
MFERLSAPKQDPILSISVAFKEDPRPNKIDLGIGVYRNSEGQTPIMAAVREAQLVLANTQQSKSYVGLAGDEVFNKAMVDLLLQGTKLHSRAAGVQTPGASGALRMLADLLKQARPDATVWISSPSYVNHRPVMEAAGLTVKEYPYFIAETKAVDEAAMLAQVEQLGESDVLLLHGCCHNPTGADISLDAWKRIAELANSKGFLPFVDIAYQGFGDGLMEDAAGLRILADSVEEMIIATSCSKNFGLYRERTGAAIVIGKTMEETMKARGRILEMARSTYTMPPDHGAAIVAMILNNPQLKETWLTELQDMNARIKRLREQLASAFQAATGSDRFDYFKRHKGMFSVTSLSDEQIATLRQEHGVYLVGGGRLNVAGLKESDIDAVVKAFIAVGA
>NC_007645.1|WP_011396645.1|2891969_2892929_+|DMT-family-transporter
MSASASINAHSEASLTRVTPILSDSKQKLLGYGAACLTVLIWSSYFLSLKFGALSPLGIFDLALFRFCIPGLILTPLLIKRRHRILAAPKLYLLGVMLGAGLPFFLLSAAAMGWAPVADGSTLIPGAAPLFVTGMAVLIFKEPLSVWRRYGLLAVAVGASCFLYSSLSNPSGDLWRGHVLFLFCSAMWAVFTISVRQSGLKPLEAAAVVTTPNAALLLIWALWSQPELAWSSLPVMELTAQMLVQGIGVGLGAGFLYSFAISRLGAEITSAIGSMTPVCATLLAAVLLQESVEFASLLGLGLVTSGVICASGLLNREKA
>NC_007645.1|WP_011396658.1|2907997_2908765_+|hypothetical-protein
MIKQLVRPVLTGKGPNFSDLTAKECGIGDFRLQYKLPGNSIYTGRPRKPTPERVNLQRDLFDTYRVQQKFNRTFVQMEFEWWAYRGLFLQGYFGKLSELIMDIDVNRGESHTPFVAGDLDSLESYLKKDYWEYYETEKNRDGEPGANWQARYNFDNPDEVRAKGYIPFDTLVLVRLPENYDRVSINGEEWLHYAIRGEGIPGPRITYYWAYPLTESYYLTFSFWLTTEIGNRDMRAQRMYEDAKRIMSMVELMKG
>NC_007645.1|WP_011396659.1|2908992_2909460_+|hypothetical-protein
MNERQFEELNEHLQRVMPCMDRFCEIAGYEYVNRRALGRYPRIRIQQPGEICRWIELWMELDENGDRYERFFEDIPYELSAGAKVEITDGTPYGHRYFKTFVLFSRKPFREVPLALEAQLRKAHVLLSGWDKAFVMAQGRKVVLGGAPGSNVSQF
>NC_007645.1|WP_011396660.1|2909786_2912018_+|CRISPR-associated-helicase/endonuclease-Cas3
MKMFYAHSTPDTSKQDWQLLSEHLSEVGRLAKKFAAVFGCGVENLADISGLLHDLGKYTDEFQRRLTGETLRVDHATAGAKLVVEKYQSLGYLLAYAIAGHHAGLANGVNGVNRTSLEDRLKSETYKLSEVWRSELNIPEQLPLPTRFHARQNRNFFQLAFLTRMLFSCLVDADFLDTEAFYLQAEGESNSRGEYPSLADLKPELDSFLSGFKDEGKPVNRRRREILQTVRCNAELDPGLFSLTVPTGGGKTLASLAFALDHALMHKLERVIYVIPFTSIVEQNAAVFRQALGKRGEGAVLEHHSAFIEDRSKDPEAREKLKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIANSAVILDEAQTLPLKLLKPCVAALDELALNYRTSIVLCTATQPALHECDNVEDSFVGGFRNVRELAPNPEQLYRDFKRVSVRHIGVLDDEALTSMLLERKQALCIVNNRRHAKAVFESIRSEPGARHLSTLMCAKHRSQVLAQIRKDLKQGKPCRLVSTSLIEAGVDIDFPTVLRAEAGLDSIAQAAGRCNREGMLPADECEVLVFNPANEDWAPPVELEQFASVSRGVMRHHADPLSLAAIEDYFQHLYWRKEKELDAHDLLGLIASAGIKGLPFETLSSKFRLIESQQMPVIIPFDDIARKGLDALDYAEGCVGISRCLQPYIVQIPQVAYQALFDAGAIVAKAEERFEQQFVYLANMDLYDKECGLSWDNPTFIRAEKQVW
>NC_007645.1|WP_011396661.1|2912056_2912725_+|type-I-C-CRISPR-associated-protein-Cas5
MSYGIRLLVWGERACFTRPEMKVERVSYDVITPSAARGIIEAIHWKPAIRWVIDRIHVLNPIRFESIRRNEVGGKLSARNVAKAMKAGRVDGVAFFVEEDRQQRAATVLRDVAYVIDAHFELTEKAGVDDSEGKHLDIFNRRARKGQYFHAPCLGVREFPAYFRLLDADESPPQPHTSLEGEVDLGWMLHDIDFVNGMTPRFFRARMVNGVIEAPSFAEAIA
>NC_007645.1|WP_011396662.1|2912721_2914500_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSALNEYYQRLAECDEVPQYGFSREKVSYVIVLNEEGDIKDVADIRRTSGKKATPVSIEVPSPPKRASNIEPCFLWDKTSYVLGVSAKGSDRMAREHEAFKSTHFRLLAGSEDPGLKAVNLFLKNWSPDQFCPPHFKEEMRDANFAFQLDGHKQYVHERTAARDLMSKVKKNDDATEGRCLVTGVYGPLARLHPAIKGVNGAQSSGASIVSFNLDAFTSYSKSQGENAPVSEQAAFAYTTVLNHLLRRDEQNRQRLQIGDASVVFWALSENVGAAMAAENAFALLLDPPTDDGQETAKLHSILEKIAQGRPLSDVNPDLDESTRFYVLGLAPNASRLSIRFWHTGTLGVFARRMAEHYQDLDIHPRPWKTEPAMWRLLKALAVLGKTENIPSKLAGEMTRAILNGSRYPRSLLTGALMRMRADGDVSGLRVALCKAVISREYRLNANRSQTEEVPVSLDTENSNPGYRLGRLFAVLEKIQRSALGEKLNATIRDRYFGAASSAPGSIFPLLLRNAQHHLSKIRKEKVGLAKALERDVSEIIDGLGSSFPRSLRLDDQGCFAIGYYHQSHSRLNQKDSGEIEASHNEGEIA
>NC_007645.1|WP_011396663.1|2914496_2915390_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTAIANRYEFVFLFDVTNGNPNGDPDAGNLPRLDPETNHGLVTDVCLKRKVRNFVALEKSDMNGSAPGFNIYVQEKSVLNNQHKQAWEALGIPPDAKDKYKKLPKDEAKARELTAWMCNNFFDIRAFGAVMTMEVNCGQVRGPVQFAFATSVDPVTPLEISITRMAVTNERDLESERTMGRKHIVPYGLYRAHGFISAKLAERTGFSEEDLQLLWRALINMFEHDRSAARGEMAARKLIVFKHEHPMGDAPSHVLFDKVKVERSEGEADTPARSYNDYRVTVDSESIPVGVCVQELL
>NC_007645.1|WP_011396664.1|2915399_2916014_+|CRISPR-associated-protein-Cas4
MEEERLIPLSALQHYVYCPRQCALIHIERFWAENYWTAQGRVLHQRTDEGKPEQRANTRIERSVEVISHELGVQGVLDVLEIDLRDMTFTPVEYKRGKPKVTNCDRVQLCAQALCLEEMRGVKIDRAALWYWEVRQREWVELDAALRAETLDVISQVQALFSSQRTPRAVYGKHCLACSLRDECQPKAMQEDRVDQYLRGMLEP
>NC_007645.1|WP_011396665.1|2916010_2917027_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLQNSLYVTRQESYLHKERETIVIKQGKDKLAQFPAHAVANIFCFGQISVSPFLMGYCGEQGIGLVFFTEYGKFLARIQGRQSGNVLLRREQYRVSDKDTPRLDIARSIVLAKIANSRRVLQREVRNKGAHPSLDEAIARLANCLRRCERPDNLDILRGLEGEAAAIYFGVFNQLLKQDGFDFKGRVRRPPTDPVNALLSFLYTLVAQEISSALQGVGLDPYVGYLHVDRPGRVGLALDILEEFRAWWCDRLVLTLINRKEVKASDFDIEASGAVRLKEDARRKVLVAYQEKKQEEISHPFLNEKVQVGLLPHCQALLLARHLRGDLQHYPPFSTR
>NC_007645.1|WP_011396666.1|2917031_2917325_+|CRISPR-associated-endonuclease-Cas2
MLVLITYDVSVITSEGQRRLRHIAKVCVDYGMRVQNSVFECEVDPAQFTFLKQKLLDIYHPDEDSLRFYFLGKKGRQKVEHYGAKPTPDIFRDSLII
>NC_007645.1|WP_158304957.1|2921592_2921823_-|hypothetical-protein
MPKRKYNPQWIRSSKPDESGQYLVAVDSVLGMGAIMCYEYSVINGWSHKDPNETIFAYMKLEDAVSALPYPWDDDE

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Crispr_ID: NC_007645_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007645_3

2917501-2921171

TypeI

I-C

Consensus_repeat	Method
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CRT

55 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_007645_3

>merge|NC_007645|3|2917501-2921171|CRISPRCasFinder,CRT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAACATGTGCGGATCTGAAGCACCGTATCGCCGTGCTGGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCAGCGAAAGTCGATCTCGGATACAATCAATGAAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACACTAATAAACTTGATGATTGGGAAACTTACACAAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACACTAGAGCACGGCTTCACTAGAGCACGGCTTCACTGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCTGAGAAGCCGGTCAAGAAATCCGCCAAGAAAGAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTTCATGTACAAGCGCGGTCCGCTAGTCACCCCGACGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTGGTCCATCTGTGCGGCCATGGCGAGCATCTCAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTTCAGCTCCAAAGCCGTATTCGTTTCTCATTTATCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCGGTATTTGCGCAGAATACCAAGTCACCAACTTAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGTGTCAGCCTGGGCAGGTCAACGCGGTGCCAGCTGTCGCCTCCCATGCGGAGGCGTGGATTGAAACATTTACAGGCCCTTTTGATACTGGGTGCGAAAAAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACAGTCAGGCCGGCCCGCGATGGATGATGCTTTAAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTTGACGGCGCTATCCTGTGCGCGGCGGGCAAGGCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACATCATGAAAAAGAAGATGGTAGAGGATCTCTATGTCGCCTCCCATGCGGAGGCGTGGATTGAAACAGCGAATAACCATGCAGGTCAGAGTCCTTAAGCGAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTGTGTCCGCATGAGCGAGACAGTATTCATAGACCAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACACCGCCAACCAAAGTATTAGTCGACGACATAACCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTTCTAACTTTATTTACAACAGACGTAAATTGATCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACACCGCAAGCAAGCTATCAACTTTAGAAAATGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCGGTGAGCCTGTCACAGATACCTTGGTTATTGCCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGCGAATGTTTATTTCGAGGCGGGAGAGATCCCTGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTAACAATCAGGGTTGTTGACAAAGTGAACAAAATGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCCCTTGGCAACAAGTGGAGACGAATTACCATAACGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGATCCAGCGGCGGGGAGATACACAATTGTCTCGCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACAATCGTAATAGCGGCGGGTTTGGCCGCTTATATAAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGGCGACAGTGTGTGTAAGGTGGGCGTTTTGTTGTGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCTTTTGGGGGTGGGAATGATCGCGCTCCCGTATGCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGACTGGTCTGCGACCATTGGCGGCATTAAGTTTGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGACTGGTCTGCGACCATTGGCGGCATTAAGTTTGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTCCGATCTTGCGATCAGTTATATGGATTAGCTCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCTGCGATTAAAGAAGGCCGGACCGTTGTTACTAAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACATGATGATCCACAACCCGTCAACCATTGCGTGGGGCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCGAAGCTGGCGCGGGAGCTGATTACGGCCCATGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACAGGATTTCAGGCATAAGGAAAATTCCCCCTCTCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCAAACACTGAGAAAAGCCCTAACGCAGCTAAATCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTGACCCTGATCCTTGTATTGCCGTTATCAACGAAAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGAAGGCTCAATACGTAACCCTAGGTCAATCGTTCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACAGGGGAAAAAGAAAAAACAAACAGCGGTGAAAAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACATGAGACCACCTCTATCTTCGAGCCGTAGAATTTGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGCCCCTTAGCTCTACACCGGGGCGATCAATCACGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGAATGAAAGCTATTGACGGACTGGGTAGAGCATTGTCGCCTCCCATGCGGAGGCGTGGATTGAAACACTGCTCTGCGACCCCGGCATCAATGGATATCGGAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGACTCAGGAGGTCATAAAGACAATGCAAAAAAAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCTGCTCTTTGTCTGTTAGTCGAACGGTAGATGGCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTTAAGCATCGAGCGAAGCGAGCTGCCGAAGCGCAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGCGTCCGTCGATCTGGATCTACCTAACACCGAGCGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTGCAAGCGCCGGAAGAGAAAACCGTCGCAGCCGGGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACAGGAATTTGAACCGCGTGAAAAATGGGAACCGTAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACTGCAATTGCATTAACAGCTGTTGAAAGCATTTGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCATGCATGGCATTGCGCCTCAGACGGTCCACCAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACATCCATTTAGATACGGTTGTGGTGTGAACACCCAAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGGCTCAGCGCCCTTAACCCTTTTTATTACAAGTGAGTCGCCTCCCATGCGGAGGCGTGGATTGAAACAGCATAAATTCCACCGGCATTAACATGAGTCCAGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACGTAAAGTCTAATGATTTGGTCGCTTTTATTCGGGGGTCGCCTCCCATGCGGAGGCGTGGATTGAAACCATGCCAAGGATACCTCCAACATTGTCCCGATGAGTCGCCTCCCATGCGGAGATATGGGTTGAAAC

>NC_007645|3|3|2917501-2921171|CRISPRCasFinder
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATGTGCGGATCTGAAGCACCGTATCGCCGTGCTGG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CAGCGAAAGTCGATCTCGGATACAATCAATGAAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACTAATAAACTTGATGATTGGGAAACTTACACAAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACTAGAGCACGGCTTCACTAGAGCACGGCTTCACT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CTGAGAAGCCGGTCAAGAAATCCGCCAAGAAAGA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTCATGTACAAGCGCGGTCCGCTAGTCACCCCGAC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGGTCCATCTGTGCGGCCATGGCGAGCATCTCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTCAGCTCCAAAGCCGTATTCGTTTCTCATTTATC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CGGTATTTGCGCAGAATACCAAGTCACCAACTTAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GTGTCAGCCTGGGCAGGTCAACGCGGTGCCAGCT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATTTACAGGCCCTTTTGATACTGGGTGCGAAAAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGTCAGGCCGGCCCGCGATGGATGATGCTTTAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTGACGGCGCTATCCTGTGCGCGGCGGGCAAGGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATCATGAAAAAGAAGATGGTAGAGGATCTCTAT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGCGAATAACCATGCAGGTCAGAGTCCTTAAGCGA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGTGTCCGCATGAGCGAGACAGTATTCATAGACCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACCGCCAACCAAAGTATTAGTCGACGACATAACC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTCTAACTTTATTTACAACAGACGTAAATTGATC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACCGCAAGCAAGCTATCAACTTTAGAAAAT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CGGTGAGCCTGTCACAGATACCTTGGTTATTGCC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GCGAATGTTTATTTCGAGGCGGGAGAGATCCCTG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TAACAATCAGGGTTGTTGACAAAGTGAACAAAAT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CCCTTGGCAACAAGTGGAGACGAATTACCATAAC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GATCCAGCGGCGGGGAGATACACAATTGTCTCGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AATCGTAATAGCGGCGGGTTTGGCCGCTTATATAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GGCGACAGTGTGTGTAAGGTGGGCGTTTTGTTGT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CTTTTGGGGGTGGGAATGATCGCGCTCCCGTATGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GACTGGTCTGCGACCATTGGCGGCATTAAGTTTG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GACTGGTCTGCGACCATTGGCGGCATTAAGTTTG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TCCGATCTTGCGATCAGTTATATGGATTAGCTC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CTGCGATTAAAGAAGGCCGGACCGTTGTTACTAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATGATGATCCACAACCCGTCAACCATTGCGTGGGGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CGAAGCTGGCGCGGGAGCTGATTACGGCCCATG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGGATTTCAGGCATAAGGAAAATTCCCCCTCTC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CAAACACTGAGAAAAGCCCTAACGCAGCTAAATC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGACCCTGATCCTTGTATTGCCGTTATCAACGAAAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GAAGGCTCAATACGTAACCCTAGGTCAATCGTTC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGGGGAAAAAGAAAAAACAAACAGCGGTGAAAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATGAGACCACCTCTATCTTCGAGCCGTAGAATTT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GCCCCTTAGCTCTACACCGGGGCGATCAATCAC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GAATGAAAGCTATTGACGGACTGGGTAGAGCATT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACTGCTCTGCGACCCCGGCATCAATGGATATCGGA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GACTCAGGAGGTCATAAAGACAATGCAAAAAAAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CTGCTCTTTGTCTGTTAGTCGAACGGTAGATGGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTAAGCATCGAGCGAAGCGAGCTGCCGAAGCGCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GCGTCCGTCGATCTGGATCTACCTAACACCGAGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGCAAGCGCCGGAAGAGAAAACCGTCGCAGCCGGG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGGAATTTGAACCGCGTGAAAAATGGGAACCGTA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGCAATTGCATTAACAGCTGTTGAAAGCATTTG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CATGCATGGCATTGCGCCTCAGACGGTCCACCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATCCATTTAGATACGGTTGTGGTGTGAACACCCAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GGCTCAGCGCCCTTAACCCTTTTTATTACAAGTGA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGCATAAATTCCACCGGCATTAACATGAGTCCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GTAAAGTCTAATGATTTGGTCGCTTTTATTCGGGG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CATGCCAAGGATACCTCCAACATTGTCCCGATGA
GTCGCCTCCCATGCGGAGATATGGGTTGAAAC

>NC_007645|3|2|2917501-2921171|CRT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATGTGCGGATCTGAAGCACCGTATCGCCGTGCTGG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CAGCGAAAGTCGATCTCGGATACAATCAATGAAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACTAATAAACTTGATGATTGGGAAACTTACACAAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACTAGAGCACGGCTTCACTAGAGCACGGCTTCACT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CTGAGAAGCCGGTCAAGAAATCCGCCAAGAAAGA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTCATGTACAAGCGCGGTCCGCTAGTCACCCCGAC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGGTCCATCTGTGCGGCCATGGCGAGCATCTCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTCAGCTCCAAAGCCGTATTCGTTTCTCATTTATC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CGGTATTTGCGCAGAATACCAAGTCACCAACTTAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GTGTCAGCCTGGGCAGGTCAACGCGGTGCCAGCT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATTTACAGGCCCTTTTGATACTGGGTGCGAAAAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGTCAGGCCGGCCCGCGATGGATGATGCTTTAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTGACGGCGCTATCCTGTGCGCGGCGGGCAAGGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATCATGAAAAAGAAGATGGTAGAGGATCTCTAT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGCGAATAACCATGCAGGTCAGAGTCCTTAAGCGA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGTGTCCGCATGAGCGAGACAGTATTCATAGACCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACCGCCAACCAAAGTATTAGTCGACGACATAACC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTCTAACTTTATTTACAACAGACGTAAATTGATC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACCGCAAGCAAGCTATCAACTTTAGAAAAT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CGGTGAGCCTGTCACAGATACCTTGGTTATTGCC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GCGAATGTTTATTTCGAGGCGGGAGAGATCCCTG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TAACAATCAGGGTTGTTGACAAAGTGAACAAAAT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CCCTTGGCAACAAGTGGAGACGAATTACCATAAC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GATCCAGCGGCGGGGAGATACACAATTGTCTCGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AATCGTAATAGCGGCGGGTTTGGCCGCTTATATAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GGCGACAGTGTGTGTAAGGTGGGCGTTTTGTTGT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CTTTTGGGGGTGGGAATGATCGCGCTCCCGTATGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GACTGGTCTGCGACCATTGGCGGCATTAAGTTTG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GACTGGTCTGCGACCATTGGCGGCATTAAGTTTG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TCCGATCTTGCGATCAGTTATATGGATTAGCTC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CTGCGATTAAAGAAGGCCGGACCGTTGTTACTAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATGATGATCCACAACCCGTCAACCATTGCGTGGGGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CGAAGCTGGCGCGGGAGCTGATTACGGCCCATG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGGATTTCAGGCATAAGGAAAATTCCCCCTCTC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CAAACACTGAGAAAAGCCCTAACGCAGCTAAATC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGACCCTGATCCTTGTATTGCCGTTATCAACGAAAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GAAGGCTCAATACGTAACCCTAGGTCAATCGTTC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGGGGAAAAAGAAAAAACAAACAGCGGTGAAAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATGAGACCACCTCTATCTTCGAGCCGTAGAATTT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GCCCCTTAGCTCTACACCGGGGCGATCAATCAC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GAATGAAAGCTATTGACGGACTGGGTAGAGCATT
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ACTGCTCTGCGACCCCGGCATCAATGGATATCGGA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GACTCAGGAGGTCATAAAGACAATGCAAAAAAAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CTGCTCTTTGTCTGTTAGTCGAACGGTAGATGGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TTAAGCATCGAGCGAAGCGAGCTGCCGAAGCGCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GCGTCCGTCGATCTGGATCTACCTAACACCGAGC
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGCAAGCGCCGGAAGAGAAAACCGTCGCAGCCGGG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGGAATTTGAACCGCGTGAAAAATGGGAACCGTA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	TGCAATTGCATTAACAGCTGTTGAAAGCATTTG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CATGCATGGCATTGCGCCTCAGACGGTCCACCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	ATCCATTTAGATACGGTTGTGGTGTGAACACCCAA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GGCTCAGCGCCCTTAACCCTTTTTATTACAAGTGA
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	AGCATAAATTCCACCGGCATTAACATGAGTCCAG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	GTAAAGTCTAATGATTTGGTCGCTTTTATTCGGGG
GTCGCCTCCCATGCGGAGGCGTGGATTGAAAC	CATGCCAAGGATACCTCCAACATTGTCCCGATGA
GTCGCCTCCCATGCGGAGATATGGGTTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007645.1\|WP_011396676.1\|2926633_2926999_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396673.1\|2923452_2924190_-\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NC_007645.1\|WP_011396660.1\|2909786_2912018_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_007645.1\|WP_011396658.1\|2907997_2908765_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396663.1\|2914496_2915390_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_007645.1\|WP_011396662.1\|2912721_2914500_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|187887
NC_007645.1\|WP_041598620.1\|2928050_2928578_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396675.1\|2925622_2926363_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396678.1\|2927707_2927986_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396665.1\|2916010_2917027_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_007645.1\|WP_011396674.1\|2924317_2925529_-\|chromate-efflux-transporter	unknown	unknown	gnl\|CDD\|273350
NC_007645.1\|WP_011396655.1\|2903430_2905215_+\|carbamoyltransferase	unknown	unknown	gnl\|CDD\|225103
NC_007645.1\|WP_158304957.1\|2921592_2921823_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396671.1\|2922189_2922936_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NC_007645.1\|WP_011396659.1\|2908992_2909460_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396664.1\|2915399_2916014_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_007645.1\|WP_011396677.1\|2927028_2927571_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011396672.1\|2922932_2923412_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|176643
NC_007645.1\|WP_011396666.1\|2917031_2917325_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_007645.1\|WP_011396661.1\|2912056_2912725_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534

Protein	Function_ID	Function_description	E-value
NC_007645.1\|WP_011396660.1\|2909786_2912018_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.16548e-56
NC_007645.1\|WP_011396663.1\|2914496_2915390_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	7.13257e-157
NC_007645.1\|WP_011396662.1\|2912721_2914500_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0
NC_007645.1\|WP_011396661.1\|2912056_2912725_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	7.70734e-123
NC_007645.1\|WP_011396665.1\|2916010_2917027_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_007645.1\|WP_011396674.1\|2924317_2925529_-\|chromate-efflux-transporter	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	1.15149e-88
NC_007645.1\|WP_011396655.1\|2903430_2905215_+\|carbamoyltransferase	gnl\|CDD\|225103	COG2192, COG2192, Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones].	1.39585e-151
NC_007645.1\|WP_011396671.1\|2922189_2922936_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	3.42038e-17
NC_007645.1\|WP_011396664.1\|2915399_2916014_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.37748e-44
NC_007645.1\|WP_011396672.1\|2922932_2923412_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|176643	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea. PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.	1.3812e-59
NC_007645.1\|WP_011396666.1\|2917031_2917325_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.4759e-31
NC_007645.1\|WP_011396673.1\|2923452_2924190_-\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	5.68818e-38

>NC_007645.1|WP_011396666.1|2917031_2917325_+|CRISPR-associated-endonuclease-Cas2
MLVLITYDVSVITSEGQRRLRHIAKVCVDYGMRVQNSVFECEVDPAQFTFLKQKLLDIYHPDEDSLRFYFLGKKGRQKVEHYGAKPTPDIFRDSLII
>NC_007645.1|WP_011396665.1|2916010_2917027_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLQNSLYVTRQESYLHKERETIVIKQGKDKLAQFPAHAVANIFCFGQISVSPFLMGYCGEQGIGLVFFTEYGKFLARIQGRQSGNVLLRREQYRVSDKDTPRLDIARSIVLAKIANSRRVLQREVRNKGAHPSLDEAIARLANCLRRCERPDNLDILRGLEGEAAAIYFGVFNQLLKQDGFDFKGRVRRPPTDPVNALLSFLYTLVAQEISSALQGVGLDPYVGYLHVDRPGRVGLALDILEEFRAWWCDRLVLTLINRKEVKASDFDIEASGAVRLKEDARRKVLVAYQEKKQEEISHPFLNEKVQVGLLPHCQALLLARHLRGDLQHYPPFSTR
>NC_007645.1|WP_011396664.1|2915399_2916014_+|CRISPR-associated-protein-Cas4
MEEERLIPLSALQHYVYCPRQCALIHIERFWAENYWTAQGRVLHQRTDEGKPEQRANTRIERSVEVISHELGVQGVLDVLEIDLRDMTFTPVEYKRGKPKVTNCDRVQLCAQALCLEEMRGVKIDRAALWYWEVRQREWVELDAALRAETLDVISQVQALFSSQRTPRAVYGKHCLACSLRDECQPKAMQEDRVDQYLRGMLEP
>NC_007645.1|WP_011396663.1|2914496_2915390_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTAIANRYEFVFLFDVTNGNPNGDPDAGNLPRLDPETNHGLVTDVCLKRKVRNFVALEKSDMNGSAPGFNIYVQEKSVLNNQHKQAWEALGIPPDAKDKYKKLPKDEAKARELTAWMCNNFFDIRAFGAVMTMEVNCGQVRGPVQFAFATSVDPVTPLEISITRMAVTNERDLESERTMGRKHIVPYGLYRAHGFISAKLAERTGFSEEDLQLLWRALINMFEHDRSAARGEMAARKLIVFKHEHPMGDAPSHVLFDKVKVERSEGEADTPARSYNDYRVTVDSESIPVGVCVQELL
>NC_007645.1|WP_011396662.1|2912721_2914500_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSALNEYYQRLAECDEVPQYGFSREKVSYVIVLNEEGDIKDVADIRRTSGKKATPVSIEVPSPPKRASNIEPCFLWDKTSYVLGVSAKGSDRMAREHEAFKSTHFRLLAGSEDPGLKAVNLFLKNWSPDQFCPPHFKEEMRDANFAFQLDGHKQYVHERTAARDLMSKVKKNDDATEGRCLVTGVYGPLARLHPAIKGVNGAQSSGASIVSFNLDAFTSYSKSQGENAPVSEQAAFAYTTVLNHLLRRDEQNRQRLQIGDASVVFWALSENVGAAMAAENAFALLLDPPTDDGQETAKLHSILEKIAQGRPLSDVNPDLDESTRFYVLGLAPNASRLSIRFWHTGTLGVFARRMAEHYQDLDIHPRPWKTEPAMWRLLKALAVLGKTENIPSKLAGEMTRAILNGSRYPRSLLTGALMRMRADGDVSGLRVALCKAVISREYRLNANRSQTEEVPVSLDTENSNPGYRLGRLFAVLEKIQRSALGEKLNATIRDRYFGAASSAPGSIFPLLLRNAQHHLSKIRKEKVGLAKALERDVSEIIDGLGSSFPRSLRLDDQGCFAIGYYHQSHSRLNQKDSGEIEASHNEGEIA
>NC_007645.1|WP_011396661.1|2912056_2912725_+|type-I-C-CRISPR-associated-protein-Cas5
MSYGIRLLVWGERACFTRPEMKVERVSYDVITPSAARGIIEAIHWKPAIRWVIDRIHVLNPIRFESIRRNEVGGKLSARNVAKAMKAGRVDGVAFFVEEDRQQRAATVLRDVAYVIDAHFELTEKAGVDDSEGKHLDIFNRRARKGQYFHAPCLGVREFPAYFRLLDADESPPQPHTSLEGEVDLGWMLHDIDFVNGMTPRFFRARMVNGVIEAPSFAEAIA
>NC_007645.1|WP_011396660.1|2909786_2912018_+|CRISPR-associated-helicase/endonuclease-Cas3
MKMFYAHSTPDTSKQDWQLLSEHLSEVGRLAKKFAAVFGCGVENLADISGLLHDLGKYTDEFQRRLTGETLRVDHATAGAKLVVEKYQSLGYLLAYAIAGHHAGLANGVNGVNRTSLEDRLKSETYKLSEVWRSELNIPEQLPLPTRFHARQNRNFFQLAFLTRMLFSCLVDADFLDTEAFYLQAEGESNSRGEYPSLADLKPELDSFLSGFKDEGKPVNRRRREILQTVRCNAELDPGLFSLTVPTGGGKTLASLAFALDHALMHKLERVIYVIPFTSIVEQNAAVFRQALGKRGEGAVLEHHSAFIEDRSKDPEAREKLKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIANSAVILDEAQTLPLKLLKPCVAALDELALNYRTSIVLCTATQPALHECDNVEDSFVGGFRNVRELAPNPEQLYRDFKRVSVRHIGVLDDEALTSMLLERKQALCIVNNRRHAKAVFESIRSEPGARHLSTLMCAKHRSQVLAQIRKDLKQGKPCRLVSTSLIEAGVDIDFPTVLRAEAGLDSIAQAAGRCNREGMLPADECEVLVFNPANEDWAPPVELEQFASVSRGVMRHHADPLSLAAIEDYFQHLYWRKEKELDAHDLLGLIASAGIKGLPFETLSSKFRLIESQQMPVIIPFDDIARKGLDALDYAEGCVGISRCLQPYIVQIPQVAYQALFDAGAIVAKAEERFEQQFVYLANMDLYDKECGLSWDNPTFIRAEKQVW
>NC_007645.1|WP_011396659.1|2908992_2909460_+|hypothetical-protein
MNERQFEELNEHLQRVMPCMDRFCEIAGYEYVNRRALGRYPRIRIQQPGEICRWIELWMELDENGDRYERFFEDIPYELSAGAKVEITDGTPYGHRYFKTFVLFSRKPFREVPLALEAQLRKAHVLLSGWDKAFVMAQGRKVVLGGAPGSNVSQF
>NC_007645.1|WP_011396658.1|2907997_2908765_+|hypothetical-protein
MIKQLVRPVLTGKGPNFSDLTAKECGIGDFRLQYKLPGNSIYTGRPRKPTPERVNLQRDLFDTYRVQQKFNRTFVQMEFEWWAYRGLFLQGYFGKLSELIMDIDVNRGESHTPFVAGDLDSLESYLKKDYWEYYETEKNRDGEPGANWQARYNFDNPDEVRAKGYIPFDTLVLVRLPENYDRVSINGEEWLHYAIRGEGIPGPRITYYWAYPLTESYYLTFSFWLTTEIGNRDMRAQRMYEDAKRIMSMVELMKG
>NC_007645.1|WP_011396655.1|2903430_2905215_+|carbamoyltransferase
MSKPIYVLGTGLSHDGSACLLKDGEVCVAIEKERITRIKHDGFCDSEAMQYCLDAEGIGFDDVAVVVQNANFSNFDRGNKIFHGQPRIIPDHVKTVTISHHMAHAYSVVGTSPFDDMAVLVIDGCGSSWDDCLDLDGAQVPEVQPGADFNHLFFEKDSYYLYEKGKLRPVYKDFSPFGYFLKGYSMCPPTTKHSIGGLYSGVSQYVFQGMEDPGKLMGLAPYGRPDVYDFQAFDCRNGRVFVNYDWMKHFDRPRVRYEDLAENFDYYADIAYWMQREIERALLYLVNHRFEHQPHKNLGYAGGVALNAVANAKLLKQTGFEDFYFQPAAADNGLAIGCAYYGWLEVLGQERIKHDASPYFGKSYDAEQLYPAMQAYAGKISYRRLPEDEAINRTAELLAAGKVVAWFEKGSEFGPRALGHRSILADPRNPDIREHINRNVKFREDFRPFAPSVPLEKAGVYFDCDYPSPYMILVAPTREEWKKEIPAVVHADGSARVQTVTESVSPNYYRLLNKFGELTGVSVLLNTSFNKKGMPIVETPKEALDFFMECALDALVIDGCLIEKTAVAQQTRKVDEKKEWEKGLGSLYPENVGI
>NC_007645.1|WP_158304957.1|2921592_2921823_-|hypothetical-protein
MPKRKYNPQWIRSSKPDESGQYLVAVDSVLGMGAIMCYEYSVINGWSHKDPNETIFAYMKLEDAVSALPYPWDDDE
>NC_007645.1|WP_011396671.1|2922189_2922936_+|class-I-SAM-dependent-methyltransferase
MDIQKLFDDKAEIYAKARPHYPKALYQWLADACDGHERVWDAGCGNGQAAAHLREYFSVVEASDVSAAQIENAPTYHGVHYSVRPSEDTGYPDDYFDPVCVALALHWFDYEKFWPEVKRVLRPGGLFAAWGYSWPHLGMELDGVLEQSLLQVIEPYWAPQNLLLWNEYKDVPFPLEPIRTPRFELIMPWTLDEFFSYLHSWSATRRCMEDRGDSFFADSYARMKEAWGGMKTRPVTMDVFILAGRHGG
>NC_007645.1|WP_011396672.1|2922932_2923412_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MGFALSNMQLTSAAFSNDGRIPSKHTGEGEDVSPALSWSGEPAGTQSFAVICHDPDAPLIGAQGTYGFVHWALYNIPADVHSLPEGVNAYATGRTDFGKTGYGGPMPPPGHGTHRYYFWILALNAQLDLPEGLTLWQLLEKVEPHVIGMNRLVGVYSRS
>NC_007645.1|WP_011396673.1|2923452_2924190_-|dienelactone-hydrolase-family-protein
MRKPLLTLLSLVFSCGALAAGKTVTYKVDGDAYEGYYVSPGKDAPLVLLVHDWDGLTDYEVKRAEMLSDMGYAVFAVDLFGAGVRPTKDEDKRQHTGELYKDRNKMRKLLQASLDTAKSEGGNVNNAVAMGYCFGGAAVLEMARSGADLKGFASFHGGLQTPDGQDYSKAQGQLLVLHGSADSAITMEQFAALANELEKSGVSHEMITYSGAPHAFTVFGSDRYREDADKKSWRRFGEFLASVTQ
>NC_007645.1|WP_011396674.1|2924317_2925529_-|chromate-efflux-transporter
MNDLTDTPAQTSTTGDIFRAFLKLGLTSFGGPVAHLGYFRDEFVTRRRWLSEESYADLVALCQFLPGPASSQVGFALGMRRGGLQGALAAWTAFTLPSALFLLLFALSADVFAGDVGQSLIHGLKLVAVAVVAQAVWGMARSLCPDRQRAGIAVGAVILTAALPSAFGQIGVIALGAGAGLLLCGHAQRKVEEHRPVEFPHGKSYVALATFFLLLLILPALTLATGSQALALFEAFYRTGALVFGGGHVVLPLLEASVVDPGWISADSFIAGYGAAQAVPGPLFTFAAYLGASVSSSPNGLLGAAISLIAIFLPGMLLVIAVLPHWDRFRKQARAQAAMAGANAAVVGLLGSALYHPVWTSSVLSAQDFAIALTAFTLLTIWKLAPWKVVVATTLAGALFAYF
>NC_007645.1|WP_011396675.1|2925622_2926363_-|hypothetical-protein
MKELEQLLTASAIQDANWASDLLAHMTTDDDDAVEAANEACSAILAHPDAIAHPRWPELVEAAINASRDFEDVAEEVYGERISFEDDEGGLCQGFDGYSTTYSVALLLGEKTTRAHPQWFDLVLALMDFSDCSEHQAPVVEETILPAILDNYPQWDQLIPHVLEFDAHTFIGDLLPLPQVLSHPDLMQWVEPLTSYRMMVDAVVHPDVAAHERWRELALLVNGDPSIRSYSEYPALQKLLQERGLE
>NC_007645.1|WP_011396676.1|2926633_2926999_+|hypothetical-protein
MVRIIGPATPRYRFEKCPVQDKYILVENAPFETAAATLGEALTQYANAFSASIRPFDGDDNIPLPEGESKYFYYLDKNSVHGEAIVDIHIHRHNGEHLCPGQDMNFQLCSGDAVTIGALAC
>NC_007645.1|WP_011396677.1|2927028_2927571_+|hypothetical-protein
MFTDQQIHLLHNQQPITDEPPWSGGDERAIDGFYKFIFARVSQLTMAKVHAEWEHYGSGYASFIDACFHKDKAHLHGQIEPEQRRLQVLFSRLSPYFVMLETEAPLSGFKLLPSFSGLDQLSGPDILNLAQAVQPVLEDFGLVRLYQSDLETTLSRKVKVPTVLNEGACREFDALFYWED
>NC_007645.1|WP_011396678.1|2927707_2927986_+|hypothetical-protein
MKNNKVPLSEKEKSDIAYLKNLVRELRSENAKLSKKTARLEAKCETLGNRVSVLEKLKVPKQARQLSDYEFARRIAFLLNKVGVNINGEKGV
>NC_007645.1|WP_041598620.1|2928050_2928578_+|hypothetical-protein
MKEARKILKKFYGFIYFLFLFQGCALSGLTQMEMLEAETSDMLSDEIAIEFYCGPKTYSVMASLIVPLPPIIPVFIDSDPQIFLTHPSWVTVESMSLQNQDGKQIELQFVEDRPKLKSDDRIVSLYIAKGGCDCLGDSNLEFKAINRETGVITHIKVKIIYSAGELTFEWDYLSA

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Crispr_ID: NC_007645_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007645_4

3275972-3276050

Orphan

Consensus_repeat	Method
CCTTCGACAGGCTCAGGGCGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007645_4

>merge|NC_007645|4|3275972-3276050|CRISPRCasFinder
CCTTCGACAGGCTCAGGGCGAACGGGGGTTACCCAGTTGGGTAGTCTTCAGGATGGCCTTCGACGGGCTCAGGGCGAAC

>NC_007645|4|4|3275972-3276050|CRISPRCasFinder
CCTTCGACAGGCTCAGGGCGAAC	GGGGGTTACCCAGTTGGGTAGTCTTCAGGATGG
CCTTCGACGGGCTCAGGGCGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007645.1\|WP_041598665.1\|3281544_3282075_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|227020
NC_007645.1\|WP_011397022.1\|3282642_3283158_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|227020
NC_007645.1\|WP_011397005.1\|3265221_3265521_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011397015.1\|3275034_3275952_+\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|107209
NC_007645.1\|WP_011397007.1\|3267147_3267921_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NC_007645.1\|WP_011397003.1\|3263954_3264926_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011397023.1\|3283547_3284369_+\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
NC_007645.1\|WP_011397018.1\|3277911_3278412_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_041599572.1\|3272214_3273933_+\|bifunctional-protein-serine/threonine-kinase/phosphatase	unknown	unknown	gnl\|CDD\|270916
NC_007645.1\|WP_011397021.1\|3282093_3282621_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|227020
NC_007645.1\|WP_041598663.1\|3269447_3271070_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011397006.1\|3265575_3267039_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|294013
NC_007645.1\|WP_011397020.1\|3279582_3281163_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NC_007645.1\|WP_011397008.1\|3268185_3268926_-\|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|377877
NC_007645.1\|WP_148212570.1\|3271430_3271760_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011397017.1\|3277107_3277680_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011397016.1\|3276667_3277111_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011397014.1\|3274025_3274829_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NC_007645.1\|WP_148212571.1\|3278843_3279119_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011397024.1\|3284432_3291107_+\|DUF4347-domain-containing-protein	unknown	unknown	gnl\|CDD\|372982

Protein	Function_ID	Function_description	E-value
NC_007645.1\|WP_011397023.1\|3283547_3284369_+\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	8.4877e-06
NC_007645.1\|WP_011397022.1\|3282642_3283158_-\|phage-tail-protein	gnl\|CDD\|227020	COG4675, MdpB, Microcystin-dependent protein [Function unknown].	2.79149e-51
NC_007645.1\|WP_011397015.1\|3275034_3275952_+\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|107209	cd06448, L-Ser-dehyd, Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.	3.30399e-140
NC_007645.1\|WP_011397007.1\|3267147_3267921_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.52408e-13
NC_007645.1\|WP_041598665.1\|3281544_3282075_-\|phage-tail-protein	gnl\|CDD\|227020	COG4675, MdpB, Microcystin-dependent protein [Function unknown].	3.72378e-49
NC_007645.1\|WP_041599572.1\|3272214_3273933_+\|bifunctional-protein-serine/threonine-kinase/phosphatase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.35186e-56
NC_007645.1\|WP_011397021.1\|3282093_3282621_-\|phage-tail-protein	gnl\|CDD\|227020	COG4675, MdpB, Microcystin-dependent protein [Function unknown].	4.01255e-51
NC_007645.1\|WP_011397006.1\|3265575_3267039_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	3.39843e-24
NC_007645.1\|WP_011397020.1\|3279582_3281163_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	6.5956e-107
NC_007645.1\|WP_011397008.1\|3268185_3268926_-\|PEP-CTERM-sorting-domain-containing-protein	gnl\|CDD\|377877	pfam07589, VPEP, PEP-CTERM motif. This motif has been identified in a wide range of bacteria at their C-terminus. It has been suggested that this is a protein sorting signal. Based on phylogenetic profiling it has been suggested that the EpsH family of proteins mediate this function.	5.4779e-06
NC_007645.1\|WP_011397024.1\|3284432_3291107_+\|DUF4347-domain-containing-protein	gnl\|CDD\|372982	pfam14252, DUF4347, Domain of unknown function (DUF4347). This domain family is found in bacteria and eukaryotes, and is approximately 160 amino acids in length. There are two completely conserved residues (C and G) that may be functionally important.	3.21709e-46
NC_007645.1\|WP_011397014.1\|3274025_3274829_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	5.6474e-31

>NC_007645.1|WP_011397015.1|3275034_3275952_+|pyridoxal-phosphate-dependent-enzyme
MSLHIETPLLESLPLSVKSGRAVWLKMEALQPPGSFKIRGVGAACEHHKAQGAQRFISSSGGNAGLAVAYAGRRLGIPVTVFVPETTTERAIELLRLEQAEVIVHGGTWQEANERAQAFVGASDAFIHPFDDPLLWRGHATMIDEVAKAGMKPDAVLLCVGGGGMLSGVVEGLQRNQWANVPVIAVETQGAASFHAALEAGHSVELERIDSIATSLGAKRVSTRALECAKQHPVHSVVVSDASALSACERFLTDHRILVEPACGASLAVVYENHPVLASFDRVLVIVCGGATATIDQIRKWAEAG
>NC_007645.1|WP_011397014.1|3274025_3274829_-|AraC-family-transcriptional-regulator
MNDSVHYQRLPHIPGLVLGAGRFAKFDFGRHYHLDYHIGIVTEGVQRQQYKGETQVLGPGFISLMPPGEIHDGACDSDAYTLRTFRVSQKLMLEASAELSDAHTGPELLGNVFEDPQTAARLFRLHNVMCSEAVSTLAIQSEWLSVLDALFTQTGAIRSGRDPNALSHAQWRRMQDYCLANLSEKITLDDLATLCGLGRFLFLRQFKRTVGMTPHAWLLRLRLEQACALLTQGSLSVAHIAQRVGFYDQSHFNRAFKQAFGVAPSGY
>NC_007645.1|WP_041599572.1|3272214_3273933_+|bifunctional-protein-serine/threonine-kinase/phosphatase
MRNELMLSFGQWTDKGRKEINQDFHGGYVPKGAQLTVKGAAFAMADGVSSSSVSQIASETAVKSFLEDYFCTSDAWTVQHSAQRVLRATNSWLYAEGQRSVYRYDKEKGYVCTFSAVIFKSDVAHILHVGDTRVYRLRDGALEQLTHDHRLWVSQSQSCLSRALGFREHIEIDYQPLRLRLGDIFIMATDGVYEYCDAHTLIEALQEPDDLDAIAKRMVDHALEQGGKDNLTLQIIRVEALPGDVDSLFQQQVETIPLPPILQAGAEFDGYQILRCLQTSRRSHVYLALDIVSKTKVIIKTPATDQQGDPAYLERLLMEEWIARRINSLHVAKAAQFERPRAYLYTVSEYIEGRTLSQWLRDHPRPDLETVRGIVEQAARGLMAFHRMDMLHQDLKPDNLMIDASGIVKIIDFGSTRVGGVAENDQGVRQPNLLGAALYAAPEYFLGEVGSPGSDLYSLGVLTYHMLSGGFPYGADVAKTRTAGAQKRLTYKPVLSEERDIPAWIDATLKRAVHPNPHKRYTELSEFLHDLRHPNPAYLNQTRPPILERNPVMFWQGVSLVLMAVLIWQVMS
>NC_007645.1|WP_148212570.1|3271430_3271760_+|hypothetical-protein
MQVRLVDHSWLAAGDGTLDTGTMLSLVNRKLEQIKDIAQWIVRKSGECALERVLNYTALMNALLRCKDSLSDHDDGFSQEVFCALNAHATVQLLTAERKIHYEFGHLGL
>NC_007645.1|WP_041598663.1|3269447_3271070_-|hypothetical-protein
MAISAAAVVTIAHADESAQKASTMRFEDYHFSNPLRKDLQSGAITEAQASSLFYSNPKEFARRYYPKITLPVERKKFRGIWRYYDHSHTSSTQPYDGDASKPVYDGHSGTDFWTSFIDFGKTGESGNYLVNPFPKGADTFVTGIYDGVEDAPNQPVGSSGNHLFLTTYLNKTPEDCARAFPSGSAFKQCVDDIPSWSKMSMRLLHLECGTVMINDVTGYPDNCAPAPSSRIQLPARVSSLQRLARIGYSGDAGLRGTHTHMDMSPRLVAPFKGRYNTGVNESLFFDQSWVERIENFAGGGDPHFRINGSFFPQVVNQASNNYKFTSLTPIKRLWLTEKPNGVSVPAKTIDLLTTAVTSSAPAFSSRVEYDADYRSYTLYSVSFKTKDNLLPQTGEWGVVAEDDRGKLSNSAFINITGEGSFKLSQASVSPSRVSKSDNSNVLFRWNVKSNDKMSRFQRKITRNGQCINPTTGSTTSQCWSDWNVLTTTSSNAPYSYNYSVELAPASAYRNWRTGSYVISIKGEHATRVWSEEKTVNFYLQ
>NC_007645.1|WP_011397008.1|3268185_3268926_-|PEP-CTERM-sorting-domain-containing-protein
MLKTLTKGLLLSALTVSSAYASQITWDLTEGVPYGSYNNSLSYSKDGLNLTVTGWSDTKGPADDKIEDARLGRWNGLGVCNDDEYSKTRCASPEHSTDNDPGRDGDFDMIMLSFSEAVSLSSFQNGWYAYDSDVSLLAYTGGSSSYNLNDKDWEGLLSDGWSVAGNYSNTMTKETATSTDLVSKFWLIGAYNPAFGELGELCNELNDHFKLRMLTIDTVECPEPATLGMFGLGLAGLLAARRRKAS
>NC_007645.1|WP_011397007.1|3267147_3267921_-|helix-turn-helix-transcriptional-regulator
MDQSLYYHWNNLCLYMGRFDGTYHWRHIADSFIVSLDNEFDVKLASGEIISTRCLMIPANARCDFIISNQRIAFVSSHFWRNIKTTLIYNYYCCEQDGLLFDFLDACDIARAFRDLYKRRPSADDAREILDQILNPKQYPLAPPLMDRRVRKLIELLLKNPDLSQSIDDYAELMPISAAHLSRLFKQETHISFSRFRLGVRVLYFIKQFSRSRNLTTAAHDSGFADLAHLNKCHKLLFGICPSQLWLSESELKICVA
>NC_007645.1|WP_011397006.1|3265575_3267039_-|winged-helix-turn-helix-transcriptional-regulator
MTDRDYEEMQIGEWRINVETNRLYREAAEHQLSDKVCKVLLALAENPGRTVSRETLIQKVWNENEYVGEQALNTAIWQLRKAFNDSSEAPEYIETIPKKGYRLLKEVSVIPYAPRQDITPPPSAEPAPAPTPEPETSTPDNAPEPPPEPITEVTPYPHTMTPGAPPRRARSMMLGGALLLLAGTALIGKLMYGREDAPPAQAYWCGVDTGRMERLGIDPASACMLETEQGQFGLAIGERMAKINSSYYQSPDAGDIAGDIFFCESNHKRLGHKSNTLLSFVTLKNHCMTQRDGEVDIAERSGARASLVCAEYQPQSIHLQTPTAEKHCPLPPALTMNHPNAVKDPDYWYGVRRDELADFGIDEDASCTLNAEDPTWIDTIEFGWIWGARRCADSGSNPVGCGVVSHNAQRTGATVSDFFTQDQLHNHCAAGADKLALTPAGWWRPEHNDKTSLDAYLLCEQQQPKAIQLSFKPVVGAVVEKTCALYY
>NC_007645.1|WP_011397005.1|3265221_3265521_-|hypothetical-protein
MNAKTWLLGFLIALVSTTPLSAEPKLVIKENDSLQDVLRGQADKKIGVLLNSGVELHGVLKEVGAKVIRLQELRNREAFDAVIPLSEVSAVLIDNHLFD
>NC_007645.1|WP_011397003.1|3263954_3264926_+|hypothetical-protein
MATLKYVLAPLCLLFAAAHVNAEYWCGYSDDNIRDWRVNKASECRLPTGAGELVLIEAEKHFNVSSNTWFTPVKGRHPGAMLRKCEGGKATTLSGDTMLTTAKLQKICSLQKDGAHDLLTSEGVQATVECQSYQATNIKIQTEAGEKDCGVPEVLKVATPHFKIESAKYGLDSADVTRRGIAPEEELCSLAVTDPTYPEDLTIAFVWGDAACHLTTYYKDKHACGWFANDNGMRGSKMSNFYAQPILARLCQKTKNGEVAVTKPFRRLDNHDESLSYVKGYIQCAKGAPTGIRLAIKPLVGETQEKQCPIPEALLKDKPVHKS
>NC_007645.1|WP_011397016.1|3276667_3277111_-|hypothetical-protein
MKITLYDVVGTAIIISCKSGVVYSNQTGGTACLQPEYEGVLIPIANTIGIPDLNLVSPENELENYFTGPPWFGGGATRGISEDDALAIEAILQEYALDDQISVDRSRLRQSHEAWIHINIVEVEGRSLFSGFGPYPRKGVLTWQNSD
>NC_007645.1|WP_011397017.1|3277107_3277680_-|hypothetical-protein
MELHKLGYHDKWLEYQILDPELFKRQWQVYEETGDSNTEHYRYAAFLHWITTRVAAPDEALNHFVDLTLNDPDSMMGGSAFIQLLSAPWLTDAQFDLLSRRSQEFGNWTTDKVERVALMRRLRAGGLTPSLFRDCLQLQDSGLHEILLERSDMDRDMMKQLADQGANKRIRNLAKQYSASKKRWVDAAQP
>NC_007645.1|WP_011397018.1|3277911_3278412_+|hypothetical-protein
MSIESFVGTWLLVSSISVSSEIAQEPGAVRHDKIKSGLRGAGQELIEKAKPTSGLALTIDDNGEFKEEKEGEPQVKWFDTDGVLTPKVVPFSGVVRANKSGVFLQADDIPSWAAPTDRYSVILRFDDGDTTISDQIYLIDDKLVRTVNVVTDEAYLDRTVIVYSRL
>NC_007645.1|WP_148212571.1|3278843_3279119_+|hypothetical-protein
MKGINDTIKAFMQHYAEEFKDSEVLLVLEKESIESENEANSVLNFLDSMCKKVQEDMESGVVVLNQKVHTTDAEKVCDVVEDYIEGLGYEF
>NC_007645.1|WP_011397020.1|3279582_3281163_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MASISVQNLTYRFDNGDTLFSDLTFTLDDKITGLVGRNGAGKSVLAALLTRDKKPYSGSVTQFCRVGWLRQIGAEEKLVQYETVADFMGVRDKLEALSRVAAGGCDPHDFELIGDNWLLREELEQQLPVLGLPVDPLLPCQALSGGQLTRLALHQLFQSDYGYLILDEPGNHLDEQGKRWLVEQMRRFPGGVLIISHDRDILRCVDDILELNSLGVRHYGGAYDVYAEQRANELASQERRIEHAKTQIKQMRQTMQKNREKAQQRAGQGKQVARSGSQAKVLLNTRKQDAERAGGARESNQNRQMAQVQDQLSKLNKQHEMLKQQSLSLGQTEKRVSRILDITEVRLPYIQQESDITFSVNFGEKIRLSGANGSGKSTLLKAIAGRLSPVHGEIQVRAGLCYLDQHFTLLDSAKSAQENLAHYCPHLSETDQRTLLAGIGLRRERADQAAATLSGGEKMKVAMLAISHQPGDTLLLLDEPDNHLDLDSRLMLAQALRDFTGSLLVVSHDQDFIDDIGVSEEVCLDG
>NC_007645.1|WP_041598665.1|3281544_3282075_-|phage-tail-protein
MSEPFYGEIRMFTYQFAPANWAYCSGQIYPINQNPGLYAVIGTLYGGNGSTTFGLPNLEGRAPIAWGTGVGLSSYQPGQSGGASTIQLTSSQIPSHNHTLSAVTSAGTTPEPGNQLFAYQGGDAQPDYKQPPLGTLVTMSNQMLAVTGASAGHENKQPYLSIPFCIALDGVFPQRN
>NC_007645.1|WP_011397021.1|3282093_3282621_-|phage-tail-protein
MSDSFLGEIRMFAGAYVPQQWSFCNGEILTIAQQSALYSLLGIAYGGDGAVNFALPDMRGRAPIHTGTGTGLTTRPLGSATGTETVTLTMANIPPHTHALQASNNAVTVNVSPSNQVTGVTAISFYTTTTDPTGITTLSPQAIGNNSGGGAHSNIMPYLALAFIISMSGTYPTRN
>NC_007645.1|WP_011397022.1|3282642_3283158_-|phage-tail-protein
MTPYIGQISMMGFGFPPEDWAQCDGQIQQITQNQALYSLIGIYFGGNGTSTYALPDLRGRTPVHLGASYSSQVGVTGGLEQVTITESTMGAHNHPVYASSSPADKGGPKSDRILAETPDIYCPADNLTTMNSQAIGLNGGSSGSVTPHANMQPSLTINFCIALSGAYPQRN
>NC_007645.1|WP_011397023.1|3283547_3284369_+|sulfotransferase
MESQVHFIAGLPRSGSTLLSGIFRQNPRFYAAISSPVCALMSGCLEQMGAESEFYTLFDENRRKLICRGIFDAYYQPNSDYALIFDTNRMWPARLHQLVELFDNFKVICCVRNPAWVMDSFERVCRSNPFEYSRMFNPQSRQTVYTRCEALAAESGSVGMALTALKEAFYGELSERLLLIDYDLLTQYPQKTISLLYQFIGQREFPHDFNHVEFDADEFDHAIGVKGLHRVRKKVEFRPRPSILPPDLFKKYSELAFWLDTSGTNASCIAPRQ
>NC_007645.1|WP_011397024.1|3284432_3291107_+|DUF4347-domain-containing-protein
MSRFLLNGLTSVFVSLGLTGASHAAGGGYSYQGGRRGSSRGADSGLMTLASVDALSVREVLRAGWKRDGTKPAGADELEITNAAAIRELVIIDDAVPEKRRIYEKLEPGVAFATLRPGEDGLAQLRAILSRYRDLRALHVFSHAEDGALYLGDSVVTKETLSREINTLASLDQAMQDGADVMFYGCNLAQSEKGEALLELVSAKARVDVAASDDLTGAERLGGDWDLEIKKGDIDAKPRFDSIAMVDFTAVLPYTGTLGLGGVTPGYANAKSYTIGGTSYTIKFKSGGSGSKDLYNYNAGYIYIGTRDSTQTSSSVYFTSGETFSLNSLYVYHGFGAPTKTIRITSSKGGTQDSTGPVAASTGATINFSGAQWTDITSFTVQYSDNASLDWLKLDNISIANLQSSMDSDGTLTASAVVTEPVGLSSTVDTIGEAVDLFDFTLTDGGGGDGLPMTVSQVVLNVTGTSSDTERGNIIWRLNGNDASFVAGSYNGVSDTITFSSLSISVADNTSETYTVSGYYGTPTGLTEDHTVILSVDGDSDLVVGSSGTQMASGQSAVTNGSGATLDVTASKLTFSTQPAGSTSGSALTTQPVVAATDIFSNVDVDYASNISLSESSSGFLSGTTTMTPVSGVATFTNVAYTASADQENFALTAAASGLSDGTSNTVTSDVVATQLRFSTQPAPTSIDSGSSTSFTTVPVVQAVDGANTLDVGYSTDIVLSVTDPNDSVLDGTVNSLSGSGDGDGSGTTVTLTPSSGSVTYTNLALQYTNGGATDTIALRAASGGLSSANSSSITSTVNNAPVISNLNGDSVSWAGVGGTVNLDAGGDAGGSDTELDALNGGNGDYSGGTLTVQRVGGAVTSDLFGFDVDGAAFSVNGSDLQSFGQSFASFTNANGVLSITFNSSSTAATTALVSNVISRITYRNDTPGGDASVRFTLSDGSKSTTADASVQSDSIYITNTTDTASIDRTDGVSFSEAIAIANADGTGTQTLILAGALAAQTISATSASSLVESLTLDLDSASGATISGGTLTLGGGVTLTMNNGSGDTGSIGTVFAGTGSLSKTGAGALTLTGAQTYSGTTTISAGALSIASDSNVGSGQLVLNGGTLTVTGSTTINNAIHVAADSTFSVSSNVTASGLLSGSNPLTKTGASTLTLSNTGNAASFSGAMTVSAGTLAVSSDANLSSGVITLDSGVLNLTGATFTVDNAIVLGAGGGTVGALAGTKVLSGVVSGSGSFSKTGGPALTLSATNTYTGGTSINGTNGLIITDSANLGSGNVTLKVNSLLSVTGSGVTIANNLVMEGDATLSNANDITWSGVISGSGALAKSGAGTLTLSGSQTQTGGLSITTGSVSIAGDSNLGSGTLTLDGGSLIVTGSGITVDNALSLGGSNGTISNASSLTWSGVISGSGGLTKTGAGTLTLSATNTNTGTIALSAGTLDVSGAVGGAVSVASGTTLQGGGSIGGLVTVSSGGTLQIGSSPGDLTLGNGLTVNSGGALVTRINGTTAGSGYDQYNVTGAVTLGGTLSVIGSYTGNGGDSFVIINNDASDAVSGIFNGLSEGDKSTTLNGVPLTVSYLGSSGNDVTLTVVPPTVTDARISISGASGTSGAFKIGDVVTTTWDDTAATGDNNGDIASVSVDYSAFGGGASVAASNSANTWTATYTITAGVVDGTNLNVSITATDSGGVSKTTADSTNATVDNIAPTVTAGNISLSGASGTSSAYKIGDIVTATWNNTGGGDSNSDTISGVSVDFSAFGGSSVAASNSSDTWTATYTILSGAVDSTNLNVLVTATDNAGNAKTTSGSNNVTVDNIAPTLTDAKISIAGATGTSGAYKIGDTVTATWNDTAATGDNNSDTISAVSVNFTAFGGGAAVGASNSSDTWTASYTLVAGAIDSSNLNVSVTATDNAGNTALVADTSNATVDTQAPTVSSVTSSTANGSYKTGDGVSIQILFDQSVVVSGTPQLQLETGITDRNVDYASGSGGSTLNFAYTVQSGDASADLDYTGTGALGLNGGTIVDDAGNAATLTLAAPGAANSLGANKALVIDAIAPSLSLITPVTTPTTDSTPNITFSTDEVGTLSMGGSCGTSSSTTISSTGNHSITLTQTDNSSALGDGTYSDCTVTVTDAVGNASTALAITAFTVDTTAPSGHSVSFDDSTISSTEASSQSFTFASAEVGASYSYSISSSGGGTAVSGSGSVTSASQQVTGLNLSGLNDGTLTLS

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Crispr_ID: NC_007645_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007645_5

7147051-7147200

Orphan

Consensus_repeat	Method
TACAAAAAAGTATCATACTTAAT	PILER-CR

2 spacers

The CRISPR arrays of NC_007645_5

>merge|NC_007645|5|7147051-7147200|PILER-CR
TGTAGAAACACAAAAAAGTATCATACTTAATAGATTATAACCCATTGATTCTATTATGGTGACCGTTTAACCAGAATCTAAAAGTATCATACTTAATCGAAGCCCTTTACTTGCAAAGCCAAAATTCCCATACAAAAAAGTATCATACTT

>NC_007645|5|2|7147051-7147200|PILER-CR
TGTAGAAACACAAAAAAGTATCATACTTAATA	GATTATAACCCATTGATTCTATTATGGTGACCGTTTAACCAGAATCT
AAAAGTATCATACTTAATCGAAGCCCTTTACT	TGCAAAGCCAAAATTCCCATACAAAAAAGTATC
ATACTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_007645.1\|WP_011400689.1\|7134030_7135113_-\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|237999
NC_007645.1\|WP_041599063.1\|7145294_7145936_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011400707.1\|7161627_7162728_+\|DNA-sulfur-modification-protein-DndB	unknown	unknown	gnl\|CDD\|163189
NC_007645.1\|WP_011400694.1\|7143087_7145271_+\|transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273954
NC_007645.1\|WP_011400691.1\|7136129_7136543_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_041599065.1\|7146606_7146933_+\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011400703.1\|7154625_7159590_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|372468
NC_007645.1\|WP_011400693.1\|7136955_7143078_+\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|225248
NC_007645.1\|WP_011400700.1\|7148279_7148981_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011400705.1\|7160265_7160703_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011400710.1\|7166350_7166686_+\|DNA-sulfur-modification-protein-DndE	unknown	unknown	gnl\|CDD\|274474
NC_007645.1\|WP_011400701.1\|7148984_7151987_-\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|380297
NC_007645.1\|WP_011400697.1\|7146097_7146517_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011400709.1\|7164307_7166299_+\|DNA-sulfur-modification-protein-DndD	unknown	unknown	gnl\|CDD\|274475
NC_007645.1\|WP_083769854.1\|7135213_7136119_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NC_007645.1\|WP_011400708.1\|7162724_7164308_+\|DNA-phosphorothioation-system-sulfurtransferase-DndC	unknown	unknown	gnl\|CDD\|235877
NC_007645.1\|WP_011400688.1\|7131643_7133959_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NC_007645.1\|WP_011400704.1\|7159861_7160044_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011400702.1\|7153174_7154629_-\|hypothetical-protein	unknown	unknown	unknown
NC_007645.1\|WP_011400687.1\|7130762_7131647_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656

Protein	Function_ID	Function_description	E-value
NC_007645.1\|WP_011400689.1\|7134030_7135113_-\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	8.43957e-23
NC_007645.1\|WP_011400694.1\|7143087_7145271_+\|transglycosylase-domain-containing-protein	gnl\|CDD\|273954	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	1.11883e-131
NC_007645.1\|WP_011400707.1\|7161627_7162728_+\|DNA-sulfur-modification-protein-DndB	gnl\|CDD\|163189	TIGR03233, DNA_S_dndB, DNA sulfur modification protein DndB. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase. [DNA metabolism, Restriction/modification].	0
NC_007645.1\|WP_011400701.1\|7148984_7151987_-\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|380297	NF033455, BREX_6_MTaseX, BREX-6 system adenine-specific DNA-methyltransferase PglX.	3.72271e-08
NC_007645.1\|WP_011400703.1\|7154625_7159590_-\|AAA-family-ATPase	gnl\|CDD\|372468	pfam13087, AAA_12, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins.	7.34258e-46
NC_007645.1\|WP_011400693.1\|7136955_7143078_+\|DUF1311-domain-containing-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	1.12671e-86
NC_007645.1\|WP_011400710.1\|7166350_7166686_+\|DNA-sulfur-modification-protein-DndE	gnl\|CDD\|274474	TIGR03184, putative_phosphoribosylaminoimidazole, DNA sulfur modification protein DndE. This model describes the DndE protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndE is a putative carboxylase homologous to NCAIR synthetases. [DNA metabolism, Restriction/modification].	1.47212e-39
NC_007645.1\|WP_083769854.1\|7135213_7136119_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.46838e-09
NC_007645.1\|WP_011400709.1\|7164307_7166299_+\|DNA-sulfur-modification-protein-DndD	gnl\|CDD\|274475	TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria. [DNA metabolism, Restriction/modification].	0
NC_007645.1\|WP_011400708.1\|7162724_7164308_+\|DNA-phosphorothioation-system-sulfurtransferase-DndC	gnl\|CDD\|235877	PRK06850, PRK06850, hypothetical protein; Provisional.	0
NC_007645.1\|WP_011400688.1\|7131643_7133959_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.28209e-17
NC_007645.1\|WP_011400687.1\|7130762_7131647_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	8.52153e-30

>NC_007645.1|WP_041599065.1|7146606_7146933_+|hypothetical-protein
MNSLRLWIVQSKQTNPSDFYVRVENSEFYSAYWIARSSSTQRAEALVLETAEELALGDTEIIKTQPYDPEALIKDAMVTAKIRSMSTKLRGQEDAQLAAWISSEGRLW
>NC_007645.1|WP_011400697.1|7146097_7146517_-|hypothetical-protein
MVIQLQYKLRSEAQWHCKNLSVIEYFDLEEGEVPEVDSVPHNMHAEEYLDHSREEVEHTLLQVADETGSERLEVKETFWSAGENRIIEVLRTSGNDVLHNELIIQTIRSNPAMGEEIETVRFNREKLCNTLNFHSIDYI
>NC_007645.1|WP_041599063.1|7145294_7145936_-|hypothetical-protein
MSFTSWKTISALKQFRVAKFKQRRQIMTRPLLQQMKNIQVGGCTGLSFSWVQRHQRQRGETPANRIDYLNTDIAWKNTDYFAGYFNNTKHHSYADRIASVAPTSLGMRHGGVVIEKNYDTYGSALQHLSNNPGHHIVMMVLSGKGISTNHVCALYVDADGMKFFDPNSGEYRCTTGKRLDFFKQLTAQYHTYVSSGGVAIDITFKEVQFHHVG
>NC_007645.1|WP_011400694.1|7143087_7145271_+|transglycosylase-domain-containing-protein
MLRKLMRARKKLAAGVAVTVTLSCAALAGATYFAIKPLPEDLSAVISSASKNTYLDRRGKRLNITYENEWNIYDVNDFHNIPEFLRRAFILSEDKRFYSHGGVDWLARLNAARQNVMSGGVVRGASTISEQVVRMLHPRPRTPWSRWIEGFEAANLEAQFSKVEILEFYLNQVPYSARRRGVIQAAQYYFGRDLSTLNYKEMLALAVLVRSPRWLDPQRQLRNLNRAIDNLLDRLDLDDDERAAIAAQTLELQKTDIHYDLSHFIRFAENRLNAQNLENGAVYTTIDTELQTKIQQTLDNRLDNLASYRVQNGAVLVIDHENNEILSWVVGYAGRDDKPFNRIDAITTPRQPGSTLKPLLYANAIRKGWTAATMLDDSPLQESVGLGMHTYHNYSRGYYGLISLREALGNSLNIPAVLAVQYVGPGEFLNFLHDLGVDSLSGHPNVYGDGLALGNGEMTLYELVQAYSVMARMGDFRPLSFTEGGRSYQGHRVLSEDISSLVADIMSDPAAREKEFGWDSVLNFPHQTAVKTGTSSDYRDAWSVGFNDKYTVGVWMGNLDYAEMNKVTGSMGPAYVLRSVFNELNKNREVKPLYLSNNLQKLPVCITTGELAANGCESRDEWFLPGTVPGGASKSIDEVRIRKPSKGLLMAMDPRIPDESEYFEFALTEADNIESVKWFINGALVATTNKPTYNWKLSKGDFSTRAEIAFTDGAQPVITEEIQYRVN
>NC_007645.1|WP_011400693.1|7136955_7143078_+|DUF1311-domain-containing-protein
MTSARSGFLFLLAISGSGLSWAGQPSFDCAKASQQVEHIICDSEPLAAQDAKLAKLYGNVMKSLEQSAKDKLKSEQREWLRNRNRDCDLNGDAGESCLLGRYRQRNAELSAMLAFDSSNQPEDGELRIMRITPSGADVPAAQQLVFQFDRPVVPIGRMERDSKDIPVTITPALKCEWRWLNTSALACQLRNEDKMQQATYYEITMRPGIKTVTGAQLKQPVEHSFTTARPKVTYERFVNWLSPGAPMIQVTFNQPVTKSSVEKTLTMSAENTGLPPVNVIAYPDNLPRQQPWWMAIANDEEQPKVNDQLTQLDGDEARSVWVIEPKKELPLDQNITLQIKPGLVSSEGSEPGAENRILERFDTYPDFRFVGIRCTPKGANEAMDIELDLLLSMREGYEEFIQCAPLRSVALLFTSPVTNSMVRDQVTFEPPLNGGRKDYDPWENTQDWTHLTSPHRNGRFYQVWLPELLKADQKYAVNLDINDLTDEFGRKLKNTVSFNFFTGHREPRLEVAHDVAVLEKGVESDVPLYVTNLNKIDIAYNSLGANQSGRNQRKVISVAPAEDISYATPMGVRDLLGDASGVLFGSLTPSPTPPDWYYDPKIFAEVTPYQVHFKLGHFNSMAWVTSFSSGEPVVDANVSLWFGSYENLPGLRNLNITAKTDASGMASMPGLEQIDPQLESIYGGRSADREGFFVKVEQAGDIAIVPLNSNFSVWDRDLYPSLQRKGGHAHAWGTTAQGVYKLGDKVQFKIYVREQSNKHWVEPYESNYSLKVFDPQNKVVYERNNIGLNKFGAFDGEFTLPEQGAVGWHQFQLTLNAPSGSEVQETSWTPVTVLVSDFTPSPFKVKTELNGNLFRANDSVQVTSLATLHSGGPYTEAEVRLTAKLTPKEFSTNNPVAKGFTFGGDNNAGGESNLLDIRRQLDDAGQYVEAFTLPDSGVFYGSLMVEAAVKDERGKFVASSTTADYAGRTRYVGLRNTQWLYKKGEPARLETLVVDQSGASIAGEPVRIAINHREYKASRVKGPGNAYLTQNIMEWVEETQCELKSDKTAATCEFKPQKLGYYQFVATVKDTENRDHSTTLYGWVTGSGSVVWDQSNDATLQIVPEQTKFKIGDTARYLIKNPFPGAQALISIERYGILDSWVQTLDSSTPVIEVPVKADYLPGFYLSVVVVSPRVEKPLGPGHVDLGKPSYRMGYVAAKVVDPLKELDISVATDKEVYKPREQVKAKIRINRKKTDPAEGYEIAVAVIDESVLALNRSGDNYYDPYAGFNRLDQPDVYNYNLISRLVGRQKFEKKGANPGGGGAASAQLRNEFKFVSYWNPAIEPDDNGEAEIEFKVPDNLTGWRIFAFAVTKEDRMGLGDVTFKVNRPTEIRPVMPNQVIEGDRFKAGFNVMNRTDKERTIKMDVRVKGPLAEGAEHAFTRELKIGPYKRENIWLPIDTKGGGELVFIAKGGDQLDTDALEHKTIVNKRRSLETAATYGTTTAASVSENVQVPEGIFEDVGYIGAVLSPSVIGNLDGAFAYIRDYPYMCWEQRLTKAAVARSYLELKEYLAEDTQWPDAQKDIDSAMNAAANFQAPNGGMAYWVASNAYVSPYLSAYTAMAFNWMRASGHEAPAGVEQRLHEYLLTLLRQDSFPTFYSKGMSSSVRAVALAALAEAGKIDQSDVSRYERHTPEMDLFGKAHFLQAAVRTEHVPQTVISKSMDDILSHASQSGGKFQFNEAWDDSYSYILATPLRSNCAVLSSLLGAQTEAGMGSTIGDIPFKLVRSITQSRGSRDHWENTQENVFCLNALVNYASIYEKEDPAMKISVSFDGKNLGSASFNKKSDPMTTVSRPLTAADPGKAATLTIEKEGEGRLYYSARIAYDLKEDNAARINSGIEIRREYSVERNGKFELLKSPMQIRRGELVKVDLFVSLPTARHFVVVNDPIPGGLEPVNADLATASQVDADKGEFKAAEGSWFYTFSDWSYYGRYFWSFYHKELRHDSARFYADYLPAGNYFLSYTAQAIAEGEFSVMPVHAEEMYDPDVYGKGLPATLNVGE
>NC_007645.1|WP_011400691.1|7136129_7136543_+|hypothetical-protein
MSPRRYPVLTALALGLSACVADPGIPHPDSGLVFSHLRLQPEITDLNGFRCQPVNKTDLNHILQTGEFVSHRQIHDEYSISGCSVTGTLSINGSATPFSFDYSGIFYFADGRILACGEACCDAGFEHCGWYDPEAQE
>NC_007645.1|WP_083769854.1|7135213_7136119_+|CPBP-family-intramembrane-metalloprotease
MMEIFTDMVSFTLTPAVIWVFSLYALALIALILARSRQIPAYAWTLPASASLGAAFYFDLAAWIALLPLAALWAAGLAMVKLSGWKKALAWLATTALSLALALHLAPGFTHQTVIPTLHLGAATLPFALSAKLDKALAGLLLVALFLPYLPTLRQTGADLRRHWPLLVASLGVIFGVGALLGVDLDPKTGSYILVFAFFNLLVTCIAEETFFRLLVQRSFVSCFPNLNKVGLWGVWVAGTLFGLAHFHTGPDAALRMALITLAGYCYAWVYYKTQNFWLSVLLHFLVNVIHLCLFVYPADF
>NC_007645.1|WP_011400689.1|7134030_7135113_-|cyclic-nucleotide-binding-domain-containing-protein
MSLHASLNITDQLMSRYSPLSQLSRKYLNQVIKRSKVMTFGGGEVVFDKSAKRTDTYYLLKGALKIKKNILSSTTIDSTDPDCLFPLNGKMPEGVTVTAQEPGHMLAVDGVFLDRALAWTEAEAKQDQEDEAAREQLQEEAEVVEEISGDFDEAYFDWMASLLEFPLFFNLPPANVEKVFARFERIEVKKGQVIIEEGDEGDYFYLLIDGSARVVIGGDESKPIRVSKGSYFGEEALVSDTVRSATIIMSEDGVLARLDKKSFQSLLHDPLVNYVSLAEFRKRAAEDSKSTLLDIRSTAEFEHSPLPKCLHVPLADLRDKISGLDKSAIYYLSQEGGRRNDVAAHILYQNGIQAFVIRDE
>NC_007645.1|WP_011400688.1|7131643_7133959_-|CPBP-family-intramembrane-metalloprotease
MKVVLSLLLGVFFYAGSAFGATPDFADFEKEVTRLYQKEVASLTSLDTSTFKRAEDLIALCQFIENATYLEDLYIEPAEEDYSKCLDELSSRYSSEPVTQLYLLESEYGESLLDKAVELNRIALEDWDATDIAKLYEQLAYSLRYDKEYKAQSVVYAVSAFQKKPTVRLAEVIVDYYAKNNEVEHAKLFAEKIIPMSFSEEERTLAIKIFVKAGLLEEAAKIFSILDEEKRGNLHTLSHARLLAHLKESGALRELMQEKLDSAYHSKSPELSAIWLDYELESGDEENAVKAYRAFAVGHYSRDPFLLYWFDLATKYPGAAAQLFVENPQVLLYSLCRYMALALAPLCIFLPVHYIGLWRMRRNKFLNSPNEPIFSGWGMGQAWFLLGLVLVVSSVLYEHFYPGATSQKNVMQAPSGNGPNYMVIFVLVMFVSVICVTGRTLRRGIFHSYRHVLLGTVTPLALAVGLLFMTPILCLPDLKLIVIADVDDYIKSTYEAYGLAVSLLLFGVMVPIYEEILCRGVILNATQRYVGFWFANIIQAAIFMSMHSNQSLYPYYFVLGFIAAILYRYIGGLYAPILMHMAVNFIAVTTLVVGVVADNGVKSQALLECEQGVQNAQHEKAFLSCLPAALQGDAEAQGYVADLYLTETFVVRNVQESYSWYERALEGGDERIRNNLAWLLATSSNSSIRDGKRAIAIAEGIPSEMRNSSVLDTLAAAYASDGRYESAVSLQKSAIEKLKEDNSDAKDVLENMEKQLQLYREGKPIVHEVTL
>NC_007645.1|WP_011400687.1|7130762_7131647_+|LysR-family-transcriptional-regulator
MKSDWIESFLVFSECMNFTHAAERLHISQPALHVKIKKLSEQLQTPLYRKSGKELVLTEEGKKVQTFAREMRDRSSTFFEELRHGGSAQPVVLAAGEGAFLYLLGMAIQGFKNESEHPLRLITADKAATISAVEDGSAHLGVAALSAIPEGLELTLLTEVEQSLAVPTSHRLAKRRHLSLKDLNGEKLILPPPGMPQRMAVEQALMSNGVNWTPSVEARGWELMLHFVKLGVGVSIVNGCCNIPSALTAITIQDLPKISYYIIERKGRWKTTGAQELKNCLLKHKGDWRERRGG
>NC_007645.1|WP_011400700.1|7148279_7148981_-|hypothetical-protein
MAFSSLGKAPVALQCNPRWHRTLLEATEAAIYLAWTRLKEQSDSVIEAKDEDRITNELLKELRRVRKNGDIARFIPEIFSVPTRDSKVESLNGDSIDQMPDITIYPANPREVVTDETQDALFYECKVLDGKRNLDRYRKDGIDRFLDGRYAWAMPHAGMIAYVFERRNTCPVSSLQSYFSRLLDGVPIAELVGCEEQPSKVFDALGVNVADVALTRHKRKKLPMIDLRHLWLF
>NC_007645.1|WP_011400701.1|7148984_7151987_-|SAM-dependent-DNA-methyltransferase
MNTDDLVGQLISAGVAETSIVRLDQQATPRHLRYLDLLKECPKVDAMGPDVVVESGGQPQVYVVRQDRLGGSQGRSRQALFELIRVLGCRSDARFLVVVQHGGLDVYPVGVFTSVPQPLITDREEPAALWRSLLGGVEFSRQTSPGLKANYHWIENLLFKLLVAAATDIKAACSDLTARQVLSLVGRSLFFRFLVDRNIVKETDLPSISQKAESLSELFSTPQAMEDTCLWLDKTFNGDLLSLEDNGYQRIFRHIDDNIEKVCWSLSNIQHHAANGQLQLDWGWIKFQHVPVDVLSQVYEDFAHQFVPDLARKTSVHFTPRQIAEVVIEGAFSAVKSALPHEARVLDPSAGAGVFLVLALRRLVAEHWLHTGVRPTRQVIRQVLANQLSGFDINLDALNIAALSLYLAALELDPKPSPLTDLKFKKLIGSVLRLVDNESLGTKTDLGSLSQPIIQGIENHYDIVVGNPPWTGFKGGAAKSLNETLAQLIRHEADTTVAKSEADGVVARYGSPDIAFLLAARLWTKPEGAIALALHGRFLFQKDAYALRRHVFSVLRVTGIMNFAALRQDKRLWPTNDAQFILLVAENSQPKQSDRFYFISPRQEPQLAAVGQFRVDPSAAIPVSCQVPCKHLDAFKALYKGGPLGFELISRIQHENRHSVKTQLDQLNLKFKSGYQLGKVENRIRSAQHLVGCPTADLNMCYRVDERFAETFDIETLQWPRTPDIYEGPLLLFRESPKLDRAVRGALVSETKTAFSESFFGLSFRGKVQYRSLMDLLYILSYSDLLIYYQLLTSAKFGVERDSSLQCDLENFPLVDWESLDREMNHRVRKVASKLSAGDPCWKEVDEIVADIYELSHADQQLIKDTLSVELPFVGARHFANQSVSETDLIAFTDAFNRIAGPFSNSEHAVAMPLGKHRGWSFIQIGGNQNREDLFTMFKELERLCVTGDSYWASQLRYHVADGIEILGRIDQMRYWTKTEARIQALEWLRQCAEVAEQEV
>NC_007645.1|WP_011400702.1|7153174_7154629_-|hypothetical-protein
MMSDNKVTYHEVDFLLPAQRFNIQFSYVSQRGLPFIREFVLRLVHVAPMSKAQISTYFGLSRRETDEAISDLVQRGELTLSPEGRLTLTEKSNGYFSQIGEIPQLSAVQDSGVNLSFDLATFSCFSNQDVQDKWKTGISLKIDDNNASQSERLVEKHFQRQFNQILDKGYLSQLLAQDGKEQPTVYTVNSVNKLRQLPLRLATEFQMDNDGKAVEREDYEELNSSECVHELIAIELSRLTTSNNTMSIFKSMVSLSDEETLKLFDSRTNLINPKYVEDMQALEEHADSGRTTFLGPIYSKSNWEKLQKALAPLINKRIKSKVDTGVSRFIWIAPSDPYWAKNGRFSSSLSDFIRRSSTKEKKLYDPILYVPVSDDKDFRVARQWKHELGQFHDHARGLAEGFLDGNVEILLLEDEVAVVIYHFTQPETLPVTMPLGFITKNKKLVTKLGKLVNDYVKGSSAFDKPNDCGAISSIAKGSKWRGVT
>NC_007645.1|WP_011400703.1|7154625_7159590_-|AAA-family-ATPase
MEVEIWDGGLQEQEVAAIEKIKAAFSDSVNAPKAPVRGGSLRDQLQSSYGNNKVMLPWKGYAGFRFVEAKKEGEFDLVIVTHCNVIIVELKDWNHQPVTARGDTWYKGDQNMGRSPVSVTRGKKFTLDNKLKRLAQRFTNKGYPPFVHFFVVMTGNADFSQLPEDQLHHTISLTDFLKFADRNTFNKHFRPHPNAQVLNQDFPIFDNLFIGPQTGPKALRVDGYEAKDKIFEHPKKVYKEYIAKSEISTNTEALLRVWKFKNVEGNKAYTPEGRAEIVSREREVLQHINHQNRDLYNHCLRSLTSFQKDEVTAEYSEVYELPPGHVRFNEFIGKYGKAFSELDRLNVTKLLIAKFGDLHEMKIAHRDIADHSLWISPSKEVALSNFISAYHQPIGTVGDYRKSLSVGAVEAQDMLDGGELTPFQQDVHALGLVAWHLLSGKRMSPKSLETVQDDMLNSGQWFSEALLDAVAAKFATATEFFDALKQAEPAGEAIPTFDDAELDPYRHAINHSRQYREDDDFLVETAEKEVYVSGGRLVKAWLNAGGQGDDSAANFQILKFLKLLDKLSSVKPTYLPEIREFGIASKSSSLYMVTDQVQGATWDKALIADDEKIELIGKFVAAVEHLHGLGVAHGDIHPGNVMLETESRSLYLIDIPDFSPAGEELKNHSYSPEYIDGCTSFERDNFAVMKMSCELLGLSWGHESETYPALADAIRAELEDPHFGFKDLGRFKKAIDSGNASSEQSLIEITAGNADEAITILPDNGHLYVKIEPNHKEPTEVKVTFIGIGGSFSAMFCKQQQALLVGFKPWPRSSIRKQDIDDSHFEIGIGIRVIPGRTQEMSALTKLLNEDESFARAIELATAPEEKPEEDTLTLQLKEAFSRLDKQAVEPASAKTLEIPTAKLWRAILDTETESYPNIEVSGETIPVADAHGELLIPYSADVDPLGGFSSSDEVEALLVDKEGVERFIGEVSLKKSALKEIRLVKSRAAAYKLTDTDIVFFRTKQDRASYRKRKRALERLLDREGVMPELMDLFDPSCEKAALNYGISLSDADFARYDREDHHGNKISLNEQQREAFAKLVNNGPLSLLQGPPGTGKTEFIAAFVHYLVEMQNTKRILLVSQSHEAVNTAAERIRKHCARLNTDLEVVRFSNREGAVSPGLKDVYSNAITTEKRELFNAESKYRVEALSEAIGLEPEFISSVVLAELKLFKQIDHLETLLYQVNDLSDEKDIKELKEISVKLDLSIRSKLSTEYGISLDAGARVSEAKDILISKLCREYGVRPDEARRVKALAKISRDMQEALSGERVNVDEFYARSRQLVAGTCVGIGQGHIGIQENIYDWVIIDEAARSIASELAIAMQSASRVLLVGDHLQLPPLYSDAHKAALARKLGIHSSRTEIDEVLRSDFARAFNSTYGDQASAALLTQYRMAPPIGDLVSKTFYEGKLRNGERAIPDVYQHAPRALRSMVTWLDTSSLGQRAHHSEDRGRSIYNRSEADQIISVLKQVSEDAEFVAELSKLTSEDEAAIGVICMYAEQKRLLRQKFNQEIWSDGFKDIVKIDTVDSYQGKENRIIILSLTRSDKQHSPGFLRAPNRINVAMSRAMDRLLIVGNADIWKGNNKELPLGSVVRYMTERGQEAGYTFISAKQDGKQK
>NC_007645.1|WP_011400704.1|7159861_7160044_-|hypothetical-protein
MAEEVFNMEQAGRAHIDAPTFSLNTAYAVLVGDHVAIPVDGGWNLSDIQKLAPNATLFEL
>NC_007645.1|WP_011400705.1|7160265_7160703_-|hypothetical-protein
MTKLFLSFWHVQLDNFPEGAFSRRSLKSAEARELILQAQSEGLFQGACADDLFAPYKETERKKHDELRRTLQEDYDIPLSASDFSMKGEDYVIVYPLDLVTVSNDSSLMVVTCGYTFSNFDDTNMFSIAADSVNFCLFEAIPVQH
>NC_007645.1|WP_011400707.1|7161627_7162728_+|DNA-sulfur-modification-protein-DndB
MVSSLLNEYTHKFPAVRGMQAGRPCYIAMCPMRLIPKLFVFDEDVVPPELRAQRRLNESRVPDITHYLVENPDSYTLSAITASIDGSVIFEPVADTGPAINLGMLSIGMDTQILVNDGQHRRKAIEQAVKEAHELGHDNIPVLFFVDEGLTRSQQMFADLNKHAVRPSDSLSTLYDHRDGGSKLARYVFECVPCFKSLTDLESSSLSKRSSKLFTLSSLKQASKALLGKRGKDPISEPEMQLACEYWEAVCSNMPHWHDALERNISTSDLREQYIHAHGIGLGALGEAGSDLLRQFPNNWKDKLTHLSEIDWSRSNIKQWRGRAMDNHGKISKTRSSTVLTANIIRHALGVSLGAEQQHIEDQLTS
>NC_007645.1|WP_011400708.1|7162724_7164308_+|DNA-phosphorothioation-system-sulfurtransferase-DndC
MSQRKTLYPSMDKMLEASAFAGRPALDLILEIQSLYLENDKPWVIGFSGGKDSTTVLSLIYVALTGLPEAKRHKHIYVISSDTLVETPMVVDMINDSIEAINRNAQDKKLPISAHVVYPAWNETFWVNLLGKGYPAPTQNFRWCTERMKIDPVSTFIKDKIARFGEVIVVLGARSQESSSRAQVIAKHKIEGSSLSRHSSLPGAFTYMPIEDWTFDEVWMYLLGAPAPWGGDHFELFELYKDSSAGECPLVIDTNTPSCGNSRFGCWTCTVVTKDRAIEGLIDSGEVWLKKLKSFRNKLFKTTLPENKNEYRNFKRRTGRIQYARGAIDNDNIAEIKTIPGPYLLEYRKQWLKELLTIEKNLIEEGRKIQLIHPEELHAIRKEWMFDPNEPDWSDELPKIYHSVYGEDLDWVEHDSGAFSQADADLIAELSAENGVPAELVMKLLELELSMDGLSRRKGLFNKIENLLKNDWGSKEDIQAAKAAATHTSDFKNKLKTELNTESSDLHLKSVYDEQLKALTKEYEALS
>NC_007645.1|WP_011400709.1|7164307_7166299_+|DNA-sulfur-modification-protein-DndD
MILKSLYLQNFGVFQGSFDDNHVDLEPRVKYNRKRPIILFGGLNGAGKTTTLTAIRLALYGKQSLGRSVSVQIYHQFLVDAIHKPKGKVLAPNTAGIKLDFNFGRQGEVIDYTVERVWTVRGKSVFENVEIYQNDEHLKSLTDHQKQAFLNELIPIGVADLFFFDGEKIADLAEDNNNSALADAINRLLGLDIIDRLKADLGVYLRDRKRDKLPSAIQKEMEALENSYKSLYSKYQSQLADIEALRIESTELETTKERLNQIINDLGGAWASNRQEAETKEKMLRAKRNELQVQIRNLIADAAPLALATNQIAALLKQLTDEQQSKRQLVLQVELRKQLNKIQSALIKSLGKEHKKAIETSIEESLPAATSIDTNIIHDISDSEFNRLNHLITKVVPEQQAKVKALSSELEEVEEELAHVGLNISRAPDERRISNFVSELGEIENSLGQRQVEIKQRTEAAKATLREAMDSLRKLREKEKEFGNVTNLDQAVTLADRTRGLLESFSSKSRETRINTLEQEFIKSFAKLARKDDLMITAKIDPETFSVSLIDGTGHIIDKKKLSAGEKQIYAIAMLEALGRTSGRNLPIIIDTPLGRLDSHHRENLVKNYFPTASHQVLILSTDTEVDEDFYKELSPEISHAFEVAYDPEAGSSVYYEGYFWRH
>NC_007645.1|WP_011400710.1|7166350_7166686_+|DNA-sulfur-modification-protein-DndE
MLPQKMKISEKAFTSLRRLQNNTGLTVNIGARLAFFASIERGFTWNGDDIQLTQRELDKYSWLGDHGDIIEMLLKQKYPNLDNKDYYKAWAIHVDDGAIVIENKSSLESLM

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_007645_1	1.1\|2010748\|40\|NC_007645\|CRISPRCasFinder	2010748-2010787	40	NC_007645.1	3914818-3914857	0	1.0
NC_007645_1	1.2\|2010811\|40\|NC_007645\|CRISPRCasFinder	2010811-2010850	40	NC_007645.1	3914755-3914794	1	0.975

1. spacer 1.1|2010748|40|NC_007645|CRISPRCasFinder matches to position: 3914818-3914857, mismatch: 0, identity: 1.0

cggtggcgatcaccaacgccctcggccatgtctggcgtcg	CRISPR spacer
cggtggcgatcaccaacgccctcggccatgtctggcgtcg	Protospacer
****************************************

2. spacer 1.2|2010811|40|NC_007645|CRISPRCasFinder matches to position: 3914755-3914794, mismatch: 1, identity: 0.975

tggcccgcatcactgatccggaaggcgcgcagacccagta	CRISPR spacer
tggcccgcatcactgatccagaaggcgcgcagacccagta	Protospacer
*******************.********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_007645_3	3.19\|2918728\|30\|NC_007645\|CRISPRCasFinder,CRT	2918728-2918757	30	NZ_CP046903	Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence	31935-31964	7	0.767
NC_007645_3	3.45\|2920442\|35\|NC_007645\|CRISPRCasFinder,CRT	2920442-2920476	35	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	850150-850184	7	0.8
NC_007645_2	2.18\|2906672\|34\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2906672-2906705	34	NZ_CP021280	Legionella pneumophila subsp. fraseri strain F-4198 plasmid unnamed, complete sequence	40244-40277	8	0.765
NC_007645_2	2.25\|2907134\|33\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2907134-2907166	33	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	24056-24088	8	0.758
NC_007645_3	3.7\|2917933\|34\|NC_007645\|CRISPRCasFinder,CRT	2917933-2917966	34	NC_005307	Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome	71746-71779	8	0.765
NC_007645_3	3.19\|2918728\|30\|NC_007645\|CRISPRCasFinder,CRT	2918728-2918757	30	NC_048003	Pseudomonas phage phCDa, complete genome	32312-32341	8	0.733
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK359343	Mycobacterium phage Pollywog, complete genome	50597-50630	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KC701493	Mycobacterium phage CASbig, complete genome	10731-10764	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MF919501	Mycobacterium phage DaWorst, complete genome	48551-48584	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK524525	Mycobacterium phage Ringer, complete genome	43070-43103	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KX550443	Mycobacterium phage Magnito, complete genome	41296-41329	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MN234212	Mycobacterium phage Paphu, complete genome	41939-41972	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK814754	Mycobacterium phage Sumter, complete genome	41283-41316	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH371110	Mycobacterium phage Magnar, complete genome	41432-41465	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH576959	Mycobacterium phage Pita2, complete genome	41182-41215	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH230878	Mycobacterium phage Oogway, complete genome	42128-42161	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	AP018478	Mycobacterium phage A6 DNA, complete sequence	38915-38948	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK112532	Mycobacterium phage Bones, complete genome	42263-42296	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MG962370	Mycobacterium phage Kykar, complete genome	41763-41796	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KX683876	Mycobacterium phage CactusRose, complete genome	41179-41212	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MN585985	Mycobacterium phage Watermelon, complete genome	40663-40696	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_042326	Mycobacterium virus KSSJEB, complete genome	40594-40627	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH576975	Mycobacterium phage Target, complete genome	41128-41161	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MN586000	Mycobacterium phage Sagefire, complete genome	42832-42865	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MG925344	Mycobacterium phage Ichabod, complete genome	42397-42430	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MN062710	Mycobacterium phage Ajay, complete genome	41487-41520	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_029059	Mycobacterium phage Edtherson, complete genome	41666-41699	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_028828	Mycobacterium phage TheloniousMonk, complete genome	43570-43603	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH744414	Mycobacterium phage Arcanine, complete genome	42301-42334	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MN585997	Mycobacterium phage Traft412, complete genome	42144-42177	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MT776812	Mycobacterium phage HarryOW, complete genome	40968-41001	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH338239	Mycobacterium phage Mryolo, complete genome	40841-40874	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK524506	Mycobacterium phage Zeuska, complete genome	44164-44197	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KP027203	Mycobacterium phage Treddle, complete genome	42569-42602	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MF919508	Mycobacterium phage ILeeKay, complete genome	41175-41208	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	AY500152	Mycobacteriophage U2, complete genome	41893-41926	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	AP018477	Mycobacterium phage BK1 DNA, complete sequence	38915-38948	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK967387	Mycobacterium phage Big3, complete genome	42556-42589	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KR080201	Mycobacterium phage Nerujay, complete genome	42398-42431	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MN119379	Mycobacterium phage Anglerfish, complete genome	41577-41610	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK524499	Mycobacterium phage Tripl3t, complete genome	44052-44085	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH590595	Mycobacterium phage NEHalo, complete genome	41052-41085	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK359304	Mycobacterium phage SpikeBT, complete genome	40909-40942	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KX702320	Mycobacterium phage Bigfoot, complete genome	40159-40192	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH000606	Mycobacterium phage Fascinus, complete genome	40673-40706	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MN617845	Mycobacterium phage BaconJack, complete genome	44018-44051	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_028941	Mycobacterium phage Turj99, complete genome	42068-42101	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK359312	Mycobacterium phage Fushigi, complete genome	39207-39240	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MN119377	Mycobacterium phage Buttons, complete genome	38727-38760	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_009877	Mycobacterium phage U2, complete genome	41893-41926	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH651180	Mycobacterium phage Maroc7, complete genome	41663-41696	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	EU744249	Mycobacterium phage Lockley, complete genome	40966-40999	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KF560331	Mycobacterium phage Graduation, complete genome	42505-42538	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MT639654	Mycobacterium phage Jerm2, complete genome	42541-42574	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_031067	Mycobacterium phage Makemake, complete genome	43203-43236	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH536816	Mycobacterium phage DrFeelGood, complete genome	40435-40468	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MK359300	Mycobacterium phage AFIS, complete genome	39984-40017	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KJ409696	Mycobacterium phage Lamina13, complete genome	42551-42584	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH020236	Mycobacterium phage GageAP, complete genome	41651-41684	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_042327	Mycobacterium virus BBPiebs31, complete genome	41828-41861	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_023695	Mycobacterium phage Violet, complete genome	42927-42960	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	EU744252	Mycobacterium phage DD5, complete genome	41804-41837	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_023726	Mycobacterium phage Euphoria, complete genome	40823-40856	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MT310897	Mycobacterium phage Manatee, complete genome	40923-40956	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH399782	Mycobacterium phage Niza, complete genome	43068-43101	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	NC_028784	Mycobacterium phage Tasp14, complete genome	43220-43253	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH020244	Mycobacterium phage Lopton, complete genome	43213-43246	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	KF024724	Mycobacterium phage Trouble, complete genome	41670-41703	8	0.765
NC_007645_3	3.39\|2920046\|34\|NC_007645\|CRISPRCasFinder,CRT	2920046-2920079	34	MH450130	Mycobacterium phage Rohr, complete genome	42617-42650	8	0.765
NC_007645_3	3.40\|2920112\|33\|NC_007645\|CRISPRCasFinder,CRT	2920112-2920144	33	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	491097-491129	8	0.758
NC_007645_2	2.15\|2906474\|34\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2906474-2906507	34	NZ_CP041653	Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence	100165-100198	9	0.735
NC_007645_2	2.18\|2906672\|34\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2906672-2906705	34	NZ_CP021273	Legionella pneumophila strain D-5265 plasmid unnamed, complete sequence	10549-10582	9	0.735
NC_007645_2	2.18\|2906672\|34\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2906672-2906705	34	NZ_CP021275	Legionella pneumophila strain D-4040 plasmid unnamed1, complete sequence	30154-30187	9	0.735
NC_007645_2	2.23\|2907003\|34\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2907003-2907036	34	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	594238-594271	9	0.735
NC_007645_2	2.25\|2907134\|33\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2907134-2907166	33	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	849083-849115	9	0.727
NC_007645_3	3.19\|2918728\|30\|NC_007645\|CRISPRCasFinder,CRT	2918728-2918757	30	MK448738	Streptococcus phage Javan355, complete genome	16027-16056	9	0.7
NC_007645_3	3.19\|2918728\|30\|NC_007645\|CRISPRCasFinder,CRT	2918728-2918757	30	NC_015386	Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete sequence	147154-147183	9	0.7
NC_007645_3	3.33\|2919651\|33\|NC_007645\|CRISPRCasFinder,CRT	2919651-2919683	33	NZ_CP013052	Sinorhizobium americanum CCGM7 plasmid A, complete sequence	315074-315106	9	0.727
NC_007645_3	3.33\|2919651\|33\|NC_007645\|CRISPRCasFinder,CRT	2919651-2919683	33	KY940711	Bradyrhizobium phage BDU-MI-1, complete genome	18735-18767	9	0.727
NC_007645_3	3.50\|2920773\|34\|NC_007645\|CRISPRCasFinder,CRT	2920773-2920806	34	NC_005250	Vibrio anguillarum 775 plasmid pJM1, complete sequence	61098-61131	9	0.735
NC_007645_3	3.50\|2920773\|34\|NC_007645\|CRISPRCasFinder,CRT	2920773-2920806	34	NZ_LK021128	Vibrio anguillarum strain NB10 plasmid p67vangNB10, complete sequence	23523-23556	9	0.735
NC_007645_3	3.50\|2920773\|34\|NC_007645\|CRISPRCasFinder,CRT	2920773-2920806	34	NC_022225	Vibrio anguillarum M3 plasmid unnamed, complete sequence	19730-19763	9	0.735
NC_007645_3	3.50\|2920773\|34\|NC_007645\|CRISPRCasFinder,CRT	2920773-2920806	34	NZ_CP023210	Vibrio anguillarum strain ATCC-68554 plasmid p65, complete sequence	24143-24176	9	0.735
NC_007645_3	3.50\|2920773\|34\|NC_007645\|CRISPRCasFinder,CRT	2920773-2920806	34	NZ_CP020532	Vibrio anguillarum strain 425 plasmid pEIB1, complete sequence	49478-49511	9	0.735
NC_007645_2	2.8\|2906011\|35\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2906011-2906045	35	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	716625-716659	10	0.714
NC_007645_2	2.16\|2906540\|34\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2906540-2906573	34	NZ_CP032928	Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence	506130-506163	10	0.706
NC_007645_3	3.11\|2918199\|34\|NC_007645\|CRISPRCasFinder,CRT	2918199-2918232	34	NZ_CP020911	Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence	129541-129574	10	0.706
NC_007645_3	3.18\|2918662\|34\|NC_007645\|CRISPRCasFinder,CRT	2918662-2918695	34	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	55228-55261	10	0.706
NC_007645_3	3.38\|2919981\|33\|NC_007645\|CRISPRCasFinder,CRT	2919981-2920013	33	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	104810-104842	10	0.697
NC_007645_3	3.38\|2919981\|33\|NC_007645\|CRISPRCasFinder,CRT	2919981-2920013	33	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	94402-94434	10	0.697
NC_007645_3	3.38\|2919981\|33\|NC_007645\|CRISPRCasFinder,CRT	2919981-2920013	33	LR214959	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 5	13341-13373	10	0.697
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP026282	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence	52758-52791	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP041047	Citrobacter sp. CF971 plasmid pBM527-1, complete sequence	222435-222468	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP011133	Citrobacter amalonaticus Y19 plasmid unnamed, complete sequence	16829-16862	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP050835	Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-1, complete sequence	26706-26739	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP037735	Citrobacter freundii strain CAV1857 plasmid pCAV1857-208, complete sequence	163360-163393	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP035215	Klebsiella michiganensis strain M82255 plasmid pKOCBH-A, complete sequence	25390-25423	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	CP045556	Citrobacter sp. S39 plasmid pS39-1, complete sequence	216289-216322	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP045203	Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence	105306-105339	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP042535	Citrobacter freundii strain E51 plasmid pE51_001, complete sequence	260882-260915	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP022152	Citrobacter freundii strain 705SK3 plasmid p705SK3_1, complete sequence	248774-248807	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP019987	Citrobacter werkmanii strain BF-6 plasmid unnamed, complete sequence	103170-103203	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP030224	Salmonella enterica strain SA20083039 plasmid pSA20083039.1, complete sequence	200589-200622	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP041248	Raoultella electrica strain DSM 102253 plasmid unnamed1, complete sequence	258563-258596	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP026058	Citrobacter freundii strain FDAARGOS_73 plasmid unnamed2, complete sequence	141107-141140	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP029436	Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence	171345-171378	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP029431	Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence	292000-292033	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP011611	Citrobacter freundii strain CAV1321 plasmid pKPC_CAV1321-244, complete sequence	198442-198475	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	CP052139	Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence	250752-250785	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP026234	Citrobacter freundii complex sp. CFNIH4 plasmid pCFR-4109, complete sequence	105529-105562	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP018017	Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656L, complete sequence	19226-19259	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_MG387191	Citrobacter freundii strain 2262 plasmid pTEM-2262, complete sequence	220431-220464	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP029442	Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence	263199-263232	10	0.706
NC_007645_3	3.43\|2920310\|34\|NC_007645\|CRISPRCasFinder,CRT	2920310-2920343	34	NZ_CP048383	Citrobacter freundii strain 62 plasmid p6_A, complete sequence	226249-226282	10	0.706
NC_007645_3	3.11\|2918199\|34\|NC_007645\|CRISPRCasFinder,CRT	2918199-2918232	34	NZ_CP045406	Roseovarius sp. THAF9 plasmid pTHAF9_b, complete sequence	69466-69499	11	0.676
NC_007645_2	2.15\|2906474\|34\|NC_007645\|PILER-CR,CRISPRCasFinder,CRT	2906474-2906507	34	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	923027-923060	12	0.647
NC_007645_3	3.11\|2918199\|34\|NC_007645\|CRISPRCasFinder,CRT	2918199-2918232	34	NZ_CP010312	Geoalkalibacter subterraneus strain Red1 plasmid pGSUB1, complete sequence	159824-159857	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NC_009726	Coxiella burnetii Dugway 5J108-111 plasmid pQpDG, complete sequence	52395-52428	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NZ_CP013668	Coxiella burnetii strain 3262 plasmid QpH1, complete sequence	35533-35566	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NC_010258	Coxiella burnetii 'MSU Goat Q177' plasmid QpRS, complete sequence	37497-37530	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NZ_CP020617	Coxiella burnetii strain RSA 439 plasmid, complete sequence	35531-35564	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NC_002118	Coxiella burnetii plasmid QpH1, complete sequence	738-771	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NC_002131	Coxiella burnetii strain R1140 plasmid QpDV, complete sequence	738-771	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NZ_CP035111	Coxiella burnetii strain nine mile phase II plasmid unnamed, complete sequence	6392-6425	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NZ_CP040060	Coxiella burnetii strain RSA439 plasmid pQpH1, complete sequence	21089-21122	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NC_010115	Coxiella burnetii RSA 331 plasmid QpH1, complete sequence	24565-24598	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	LN833191	Coxiella burnetii Cb175_Guyana plasmid QpH1, complete sequence	35526-35559	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NC_004704	Coxiella burnetii RSA 493 plasmid pQpH1, complete sequence	35531-35564	12	0.647
NC_007645_3	3.20\|2918790\|34\|NC_007645\|CRISPRCasFinder,CRT	2918790-2918823	34	NC_011526	Coxiella burnetii CbuK_Q154 plasmid pQpRS_K_Q154, complete sequence	37496-37529	12	0.647

1. spacer 3.19|2918728|30|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP046903 (Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence) position: , mismatch: 7, identity: 0.767

accgcaagcaagctatcaactttagaaaat	CRISPR spacer
accgcaagcaagcaatcgactttgcaatcc	Protospacer
************* ***.*****. **  .

2. spacer 3.45|2920442|35|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.8

ttaagca--tcgagcgaagcgagctgccgaagcgcag	CRISPR spacer
--aaccaatgcgagcgaagcgagcttccgaagcgccc	Protospacer
  ** **   *************** *********

3. spacer 2.18|2906672|34|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021280 (Legionella pneumophila subsp. fraseri strain F-4198 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

tgctatcgggttgttgataatcctgatgttatga	CRISPR spacer
tacgaagatgttgtagataatcctgattttatga	Protospacer
*.* *  . ***** ************ ******

4. spacer 2.25|2907134|33|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

atatcgccggactgctcgcccagcgtcaggtgc	CRISPR spacer
ggatcgccggcctgctctcccagcgtctcgccc	Protospacer
. ******** ****** *********  *. *

5. spacer 3.7|2917933|34|NC_007645|CRISPRCasFinder,CRT matches to NC_005307 (Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome) position: , mismatch: 8, identity: 0.765

-tggtccatctgtgcggccatggcgagcatctcag	CRISPR spacer
tcggtgta-ctgggcggccatggcgaacatctctt	Protospacer
 .*** .* *** *************.******

6. spacer 3.19|2918728|30|NC_007645|CRISPRCasFinder,CRT matches to NC_048003 (Pseudomonas phage phCDa, complete genome) position: , mismatch: 8, identity: 0.733

accgcaagcaagctatcaactttagaaaat	CRISPR spacer
tccgcaagtaagctatcaacttcagctttg	Protospacer
 *******.*************.**

7. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK359343 (Mycobacterium phage Pollywog, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

8. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KC701493 (Mycobacterium phage CASbig, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

9. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MF919501 (Mycobacterium phage DaWorst, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

10. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK524525 (Mycobacterium phage Ringer, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

11. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KX550443 (Mycobacterium phage Magnito, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

12. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MN234212 (Mycobacterium phage Paphu, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

13. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK814754 (Mycobacterium phage Sumter, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

14. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH371110 (Mycobacterium phage Magnar, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

15. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH576959 (Mycobacterium phage Pita2, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

16. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH230878 (Mycobacterium phage Oogway, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

17. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to AP018478 (Mycobacterium phage A6 DNA, complete sequence) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

18. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK112532 (Mycobacterium phage Bones, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

19. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MG962370 (Mycobacterium phage Kykar, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

20. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KX683876 (Mycobacterium phage CactusRose, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

21. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MN585985 (Mycobacterium phage Watermelon, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

22. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_042326 (Mycobacterium virus KSSJEB, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

23. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH576975 (Mycobacterium phage Target, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

24. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MN586000 (Mycobacterium phage Sagefire, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

25. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MG925344 (Mycobacterium phage Ichabod, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

26. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MN062710 (Mycobacterium phage Ajay, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

27. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_029059 (Mycobacterium phage Edtherson, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

28. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_028828 (Mycobacterium phage TheloniousMonk, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

29. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH744414 (Mycobacterium phage Arcanine, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

30. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MN585997 (Mycobacterium phage Traft412, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

31. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MT776812 (Mycobacterium phage HarryOW, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

32. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH338239 (Mycobacterium phage Mryolo, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

33. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK524506 (Mycobacterium phage Zeuska, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

34. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KP027203 (Mycobacterium phage Treddle, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

35. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MF919508 (Mycobacterium phage ILeeKay, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

36. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to AY500152 (Mycobacteriophage U2, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

37. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to AP018477 (Mycobacterium phage BK1 DNA, complete sequence) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

38. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK967387 (Mycobacterium phage Big3, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

39. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KR080201 (Mycobacterium phage Nerujay, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

40. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MN119379 (Mycobacterium phage Anglerfish, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

41. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK524499 (Mycobacterium phage Tripl3t, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

42. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH590595 (Mycobacterium phage NEHalo, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

43. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK359304 (Mycobacterium phage SpikeBT, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

44. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KX702320 (Mycobacterium phage Bigfoot, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

45. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH000606 (Mycobacterium phage Fascinus, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

46. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MN617845 (Mycobacterium phage BaconJack, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

47. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_028941 (Mycobacterium phage Turj99, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

48. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK359312 (Mycobacterium phage Fushigi, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

49. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MN119377 (Mycobacterium phage Buttons, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

50. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_009877 (Mycobacterium phage U2, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

51. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH651180 (Mycobacterium phage Maroc7, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

52. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to EU744249 (Mycobacterium phage Lockley, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

53. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KF560331 (Mycobacterium phage Graduation, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

54. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MT639654 (Mycobacterium phage Jerm2, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

55. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_031067 (Mycobacterium phage Makemake, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

56. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH536816 (Mycobacterium phage DrFeelGood, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

57. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MK359300 (Mycobacterium phage AFIS, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

58. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KJ409696 (Mycobacterium phage Lamina13, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

59. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH020236 (Mycobacterium phage GageAP, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

60. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_042327 (Mycobacterium virus BBPiebs31, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

61. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_023695 (Mycobacterium phage Violet, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

62. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to EU744252 (Mycobacterium phage DD5, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

63. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_023726 (Mycobacterium phage Euphoria, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

64. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MT310897 (Mycobacterium phage Manatee, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

65. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH399782 (Mycobacterium phage Niza, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

66. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to NC_028784 (Mycobacterium phage Tasp14, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

67. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH020244 (Mycobacterium phage Lopton, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

68. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to KF024724 (Mycobacterium phage Trouble, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

69. spacer 3.39|2920046|34|NC_007645|CRISPRCasFinder,CRT matches to MH450130 (Mycobacterium phage Rohr, complete genome) position: , mismatch: 8, identity: 0.765

atgagacc---acctctatcttcgagccgtagaattt	CRISPR spacer
---aatccttaatctccatcttcgagccgtcgaattt	Protospacer
   *. **   *.***.************* ******

70. spacer 3.40|2920112|33|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gccccttagctctacaccggggcgatcaatcac	CRISPR spacer
acgcccacgctcttcaccggggcgaccaatcag	Protospacer
.* **.  ***** ***********.******

71. spacer 2.15|2906474|34|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041653 (Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence) position: , mismatch: 9, identity: 0.735

caaatcagcgcggcggcaccatcagggcgaaaat	CRISPR spacer
tgtcccagcgcggcggcaccatctggtcgaagaa	Protospacer
..  .****************** ** ****.*

72. spacer 2.18|2906672|34|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021273 (Legionella pneumophila strain D-5265 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

tgctatcgggttgttgataatcctgatgttatga	CRISPR spacer
tatgaagatgttgtagataatcctgattttatga	Protospacer
*.. *  . ***** ************ ******

73. spacer 2.18|2906672|34|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021275 (Legionella pneumophila strain D-4040 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

tgctatcgggttgttgataatcctgatgttatga	CRISPR spacer
tatgaagatgttgtagataatcctgattttatga	Protospacer
*.. *  . ***** ************ ******

74. spacer 2.23|2907003|34|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 9, identity: 0.735

actgagagcgacatagcggacatgctcggttaca	CRISPR spacer
gatcggagcgacacagcggaaatgctcggtcaac	Protospacer
. * .********.****** *********.*

75. spacer 2.25|2907134|33|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 9, identity: 0.727

atatcgccggactgctcgcccagcgtcaggtgc	CRISPR spacer
atatcgccggaccgcccgcccagcagccacacc	Protospacer
************.**.********. * .   *

76. spacer 3.19|2918728|30|NC_007645|CRISPRCasFinder,CRT matches to MK448738 (Streptococcus phage Javan355, complete genome) position: , mismatch: 9, identity: 0.7

accgcaagcaagctatcaactttagaaaat	CRISPR spacer
tgcgcaagcaagctatcaaattttgctctg	Protospacer
  ***************** *** *

77. spacer 3.19|2918728|30|NC_007645|CRISPRCasFinder,CRT matches to NC_015386 (Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete sequence) position: , mismatch: 9, identity: 0.7

accgcaagcaagctatcaactttagaaaat	CRISPR spacer
gccgcaagcaagctatcagcttcttcccct	Protospacer
.*****************.***.      *

78. spacer 3.33|2919651|33|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP013052 (Sinorhizobium americanum CCGM7 plasmid A, complete sequence) position: , mismatch: 9, identity: 0.727

cgaagctggcgcgggagctgattacggcccatg	CRISPR spacer
gacggctggcgagggagctgattgcggccggcg	Protospacer
 . .******* ***********.***** ..*

79. spacer 3.33|2919651|33|NC_007645|CRISPRCasFinder,CRT matches to KY940711 (Bradyrhizobium phage BDU-MI-1, complete genome) position: , mismatch: 9, identity: 0.727

cgaagctggcgcgggagctgattacggcccatg	CRISPR spacer
cgttcctggcgcaggagctgatgacggccttct	Protospacer
**   *******.********* ******. .

80. spacer 3.50|2920773|34|NC_007645|CRISPRCasFinder,CRT matches to NC_005250 (Vibrio anguillarum 775 plasmid pJM1, complete sequence) position: , mismatch: 9, identity: 0.735

catgcatggcattgcgcctcagacggtccaccag	CRISPR spacer
cgtccatcgcattgcgccccagacggtcaagttt	Protospacer
*.* *** **********.********* * .

81. spacer 3.50|2920773|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_LK021128 (Vibrio anguillarum strain NB10 plasmid p67vangNB10, complete sequence) position: , mismatch: 9, identity: 0.735

catgcatggcattgcgcctcagacggtccaccag	CRISPR spacer
cgtccatcgcattgcgccccagacggtcaagttt	Protospacer
*.* *** **********.********* * .

82. spacer 3.50|2920773|34|NC_007645|CRISPRCasFinder,CRT matches to NC_022225 (Vibrio anguillarum M3 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

catgcatggcattgcgcctcagacggtccaccag	CRISPR spacer
cgtccatcgcattgcgccccagacggtcaagttt	Protospacer
*.* *** **********.********* * .

83. spacer 3.50|2920773|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP023210 (Vibrio anguillarum strain ATCC-68554 plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.735

catgcatggcattgcgcctcagacggtccaccag	CRISPR spacer
cgtccatcgcattgcgccccagacggtcaagttt	Protospacer
*.* *** **********.********* * .

84. spacer 3.50|2920773|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP020532 (Vibrio anguillarum strain 425 plasmid pEIB1, complete sequence) position: , mismatch: 9, identity: 0.735

catgcatggcattgcgcctcagacggtccaccag	CRISPR spacer
cgtccatcgcattgcgccccagacggtcaagttt	Protospacer
*.* *** **********.********* * .

85. spacer 2.8|2906011|35|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 10, identity: 0.714

cagctttgcgttgtggtatttgatgatattttcag	CRISPR spacer
tcagtaaactttatggtatttgatgaaattttcag	Protospacer
. . *  .* **.************* ********

86. spacer 2.16|2906540|34|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032928 (Agrobacterium tumefaciens strain 1D1460 plasmid pAt1D1460, complete sequence) position: , mismatch: 10, identity: 0.706

tccgtccagcgctgattctcgtttccattttggc	CRISPR spacer
gcgtgccggcgctgattctcgttgccatttccct	Protospacer
 *   **.*************** ******.  .

87. spacer 3.11|2918199|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 10, identity: 0.706

atttacaggcccttttgatactgggtgcgaaaaa	CRISPR spacer
tggcgcaggcccttttgatcctgggtgagaatgc	Protospacer
   ..************** ******* *** .

88. spacer 3.18|2918662|34|NC_007645|CRISPRCasFinder,CRT matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 10, identity: 0.706

----ttctaactttatttacaacagacgtaaattgatc	CRISPR spacer
acaatt----ctttatttacaaaagacataaattctaa	Protospacer
    **    ************ ****.******

89. spacer 3.38|2919981|33|NC_007645|CRISPRCasFinder,CRT matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 10, identity: 0.697

aggggaaaaagaaaaaacaaacagcggtgaaaa	CRISPR spacer
acatactaaagaaaaaacaaaaagaggtgaacc	Protospacer
* . .  ************** ** ******

90. spacer 3.38|2919981|33|NC_007645|CRISPRCasFinder,CRT matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 10, identity: 0.697

aggggaaaaagaaaaaacaaacagcggtgaaaa	CRISPR spacer
acatactaaagaaaaaacaaaaagaggtgaacc	Protospacer
* . .  ************** ** ******

91. spacer 3.38|2919981|33|NC_007645|CRISPRCasFinder,CRT matches to LR214959 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.697

aggggaaaaagaaaaaacaaacagcggtgaaaa	CRISPR spacer
acatactaaagaaaaaacaaaaagaggtgaacc	Protospacer
* . .  ************** ** ******

92. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP026282 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

93. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP041047 (Citrobacter sp. CF971 plasmid pBM527-1, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

94. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP011133 (Citrobacter amalonaticus Y19 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

95. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP050835 (Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-1, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

96. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP037735 (Citrobacter freundii strain CAV1857 plasmid pCAV1857-208, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

97. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP035215 (Klebsiella michiganensis strain M82255 plasmid pKOCBH-A, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

98. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to CP045556 (Citrobacter sp. S39 plasmid pS39-1, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

99. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP045203 (Citrobacter sp. NMI7904_11 plasmid pCTEL-2, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

100. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP042535 (Citrobacter freundii strain E51 plasmid pE51_001, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

101. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP022152 (Citrobacter freundii strain 705SK3 plasmid p705SK3_1, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

102. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP019987 (Citrobacter werkmanii strain BF-6 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

103. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP030224 (Salmonella enterica strain SA20083039 plasmid pSA20083039.1, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

104. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP041248 (Raoultella electrica strain DSM 102253 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

105. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP026058 (Citrobacter freundii strain FDAARGOS_73 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

106. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP029436 (Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

107. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP029431 (Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

108. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP011611 (Citrobacter freundii strain CAV1321 plasmid pKPC_CAV1321-244, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

109. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to CP052139 (Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

110. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP026234 (Citrobacter freundii complex sp. CFNIH4 plasmid pCFR-4109, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

111. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP018017 (Kosakonia radicincitans DSM 16656 plasmid pKrDSM16656L, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

112. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_MG387191 (Citrobacter freundii strain 2262 plasmid pTEM-2262, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

113. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP029442 (Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

114. spacer 3.43|2920310|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP048383 (Citrobacter freundii strain 62 plasmid p6_A, complete sequence) position: , mismatch: 10, identity: 0.706

gactcaggaggtcataaagacaatgcaaaaaaag	CRISPR spacer
tcattttgtagtcataaagaccaagcaaaaaaag	Protospacer
   *.  * .*********** * **********

115. spacer 3.11|2918199|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP045406 (Roseovarius sp. THAF9 plasmid pTHAF9_b, complete sequence) position: , mismatch: 11, identity: 0.676

atttacaggcccttttgatactgggtgcgaaaaa	CRISPR spacer
cagccccggcccttttgatcctgggtgagaacgc	Protospacer
   . * ************ ******* *** .

116. spacer 2.15|2906474|34|NC_007645|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 12, identity: 0.647

caaatcagcgcggcggcaccatcagggcgaaaat	CRISPR spacer
tcgtctcgcgcggcggctccatcatggcgaagtg	Protospacer
. . .. ********** ****** ******.

117. spacer 3.11|2918199|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP010312 (Geoalkalibacter subterraneus strain Red1 plasmid pGSUB1, complete sequence) position: , mismatch: 12, identity: 0.647

atttacaggcccttttgatactgggtgcgaaaaa	CRISPR spacer
ggaaccagcaccttttgatactgggtgcggtccc	Protospacer
.    ***  *******************.

118. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NC_009726 (Coxiella burnetii Dugway 5J108-111 plasmid pQpDG, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

119. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP013668 (Coxiella burnetii strain 3262 plasmid QpH1, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

120. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NC_010258 (Coxiella burnetii 'MSU Goat Q177' plasmid QpRS, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

121. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP020617 (Coxiella burnetii strain RSA 439 plasmid, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

122. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NC_002118 (Coxiella burnetii plasmid QpH1, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

123. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NC_002131 (Coxiella burnetii strain R1140 plasmid QpDV, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

124. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP035111 (Coxiella burnetii strain nine mile phase II plasmid unnamed, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

125. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NZ_CP040060 (Coxiella burnetii strain RSA439 plasmid pQpH1, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

126. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NC_010115 (Coxiella burnetii RSA 331 plasmid QpH1, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

127. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to LN833191 (Coxiella burnetii Cb175_Guyana plasmid QpH1, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

128. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NC_004704 (Coxiella burnetii RSA 493 plasmid pQpH1, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

129. spacer 3.20|2918790|34|NC_007645|CRISPRCasFinder,CRT matches to NC_011526 (Coxiella burnetii CbuK_Q154 plasmid pQpRS_K_Q154, complete sequence) position: , mismatch: 12, identity: 0.647

cggtgagcctgtcacagataccttggttattgcc	CRISPR spacer
accagagactgtcacagacaccttggtttccttt	Protospacer
    *** **********.********* .. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

386105 : 418518

Pseudomonas_phage(50.0%)

head,portal,capsid,tRNA,integrase,plate,holin,terminase,tail

attL 383094:383112|attR 416096:416114

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
383094:383112	attL	NA	NA	NA	NA
WP_011394361.1\|386105_387191_-	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	3.7e-59	38.7
WP_011394362.1\|387166_387880_-	hypothetical protein	A0A2I7RNK1	Vibrio_phage	1.1e-35	36.5
WP_011394363.1\|387876_388398_-	hypothetical protein	A0A0U4J942	Pseudomonas_phage	1.3e-25	45.5
WP_011394364.1\|388394_389294_-	hypothetical protein	NA	NA	NA	NA
WP_011394365.1\|389293_389635_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_011394366.1\|389651_391466_-\|tail	phage tail protein	A0A0U4K5K2	Pseudomonas_phage	7.9e-62	47.3
WP_011394367.1\|391479_392076_-\|tail	phage tail protein	A0A0U4JVX3	Pseudomonas_phage	2.0e-70	73.6
WP_011394368.1\|392072_393242_-\|plate	baseplate J/gp47 family protein	A0A0U4JJ14	Pseudomonas_phage	1.2e-124	59.5
WP_011394369.1\|393238_393556_-	DUF2590 family protein	A0A0U4B0N5	Pseudomonas_phage	1.4e-14	43.1
WP_011394370.1\|393559_395584_-\|tail	phage tail tape measure protein	A0A2I7RNI7	Vibrio_phage	3.5e-119	41.3
WP_011394371.1\|395767_396052_-\|tail	putative phage tail assembly chaperone	A0A0U4B0P2	Pseudomonas_phage	1.9e-10	44.4
WP_011394372.1\|396023_396254_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_011394373.1\|396257_396737_-	hypothetical protein	A0A2I7R2B5	Vibrio_phage	2.7e-38	55.5
WP_011394374.1\|396733_397321_-	hypothetical protein	NA	NA	NA	NA
WP_011394375.1\|397317_397554_-	DnaK suppressor protein	G3EN77	Psychrobacter_phage	9.7e-05	36.8
WP_011394376.1\|397557_398013_-	DUF2597 family protein	A0A0U3TH58	Pseudomonas_phage	4.6e-43	54.8
WP_011394377.1\|398031_399135_-	DUF2586 domain-containing protein	A0A0U4KLE6	Pseudomonas_phage	2.4e-98	52.9
WP_011394378.1\|399137_399800_-	phage virion morphogenesis protein	A0A1D9C9S1	Salinivibrio_phage	5.3e-40	42.5
WP_011394379.1\|399774_400263_-\|tail	phage tail protein	NA	NA	NA	NA
WP_011394380.1\|400262_400727_-\|head	head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	6.5e-29	47.4
WP_011394381.1\|400826_401528_-\|terminase	terminase	F1BUM0	Cronobacter_phage	2.9e-20	32.1
WP_011394382.1\|401531_402569_-\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	3.2e-84	52.5
WP_011394383.1\|402594_403410_-\|capsid	GPO family capsid scaffolding protein	Q94MZ5	Haemophilus_virus	6.7e-37	60.6
WP_011394384.1\|403569_405315_+	hypothetical protein	A0A1L5C295	Pseudoalteromonas_phage	6.3e-149	47.0
WP_011394385.1\|405329_406316_+\|portal	phage portal protein	A5X9H1	Aeromonas_virus	3.1e-76	50.0
WP_011394386.1\|406380_406644_+	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	2.0e-11	39.8
WP_011394387.1\|407178_407979_-	hypothetical protein	NA	NA	NA	NA
WP_011394388.1\|407972_409346_-	hypothetical protein	NA	NA	NA	NA
WP_011394389.1\|409541_410120_-	3'-5' exonuclease	A2I2Z6	Vibrio_virus	3.4e-35	46.2
WP_011394390.1\|410184_410373_-	hypothetical protein	NA	NA	NA	NA
WP_011394391.1\|410520_411075_-	hypothetical protein	NA	NA	NA	NA
WP_011394392.1\|411532_414187_-	toprim domain-containing protein	A0A0U3TH43	Pseudomonas_phage	2.0e-159	35.8
WP_041598355.1\|414201_414399_-	hypothetical protein	NA	NA	NA	NA
WP_041598356.1\|414659_414977_+	hypothetical protein	NA	NA	NA	NA
WP_011394393.1\|414976_415987_+\|integrase	tyrosine-type recombinase/integrase	F1BUN9	Cronobacter_phage	3.2e-81	48.2
WP_011394394.1\|416062_417172_+	hypothetical protein	NA	NA	NA	NA
416096:416114	attR	NA	NA	NA	NA
WP_011394395.1\|417262_418093_+	hypothetical protein	NA	NA	NA	NA
WP_011394396.1\|418098_418518_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA

DBSCAN-SWA_2

2460287 : 2468215

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041598574.1\|2460287_2462204_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	7.4e-18	28.2
WP_011396286.1\|2462330_2463395_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.1e-98	51.5
WP_011396287.1\|2463478_2464351_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.4e-109	65.6
WP_011396288.1\|2464362_2464902_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.3e-56	59.2
WP_011396289.1\|2464901_2465813_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.2e-26	34.8
WP_011396290.1\|2465944_2466781_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_011396291.1\|2466805_2468215_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	2.4e-58	31.6

DBSCAN-SWA_3

2931442 : 2983051

Marinobacter_phage(30.0%)

head,portal,capsid,integrase,terminase,tail,bacteriocin,transposase

attL 2929595:2929611|attR 2968552:2968568

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2929595:2929611	attL	NA	NA	NA	NA
WP_148212560.1\|2931442_2932030_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_011396684.1\|2932052_2932379_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_148212561.1\|2932562_2932931_+	hypothetical protein	NA	NA	NA	NA
WP_011396687.1\|2934420_2934903_+	hypothetical protein	NA	NA	NA	NA
WP_011396688.1\|2934957_2936871_-	TonB-dependent receptor	NA	NA	NA	NA
WP_041598624.1\|2936910_2937381_-	copper uptake system-associated protein	NA	NA	NA	NA
WP_011396690.1\|2937540_2938704_-	hypothetical protein	NA	NA	NA	NA
WP_011396691.1\|2938700_2939897_-	MFS transporter	NA	NA	NA	NA
WP_148212781.1\|2939893_2941123_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_041598625.1\|2941149_2942799_-	acyl--CoA ligase	NA	NA	NA	NA
WP_011396694.1\|2942795_2944715_-	CoA transferase	NA	NA	NA	NA
WP_011396695.1\|2944720_2945011_-	MoaD/ThiS family protein	NA	NA	NA	NA
WP_011396696.1\|2944946_2945465_-	M67 family metallopeptidase	NA	NA	NA	NA
WP_011396697.1\|2945483_2946656_-	adenylyltransferase/sulfurtransferase MoeZ	NA	NA	NA	NA
WP_011396698.1\|2947174_2948269_+\|integrase	site-specific integrase	L7TP61	Pseudomonas_virus	6.2e-54	38.3
WP_083769763.1\|2948198_2948498_-	pyocin activator PrtN family protein	A0A1W6JP35	Morganella_phage	3.8e-14	51.2
WP_041598626.1\|2948494_2948776_-	hypothetical protein	A0A2I7R567	Vibrio_phage	1.8e-10	54.5
WP_011396699.1\|2948772_2949015_-	hypothetical protein	NA	NA	NA	NA
WP_011396700.1\|2949018_2949624_-	hypothetical protein	NA	NA	NA	NA
WP_011396701.1\|2949620_2951288_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	3.3e-147	44.9
WP_011396703.1\|2951533_2951935_-	hypothetical protein	NA	NA	NA	NA
WP_011396704.1\|2951945_2952389_-	hypothetical protein	NA	NA	NA	NA
WP_083769764.1\|2952402_2953047_-	3'-5' exonuclease	A2I2Z6	Vibrio_virus	3.4e-28	41.2
WP_011396706.1\|2953043_2953241_-	hypothetical protein	NA	NA	NA	NA
WP_011396707.1\|2953286_2954132_-	YfdQ family protein	I3PUY7	Vibrio_phage	6.5e-43	40.4
WP_011396708.1\|2954135_2954468_-	hypothetical protein	I3PUY8	Vibrio_phage	1.1e-25	54.3
WP_011396709.1\|2954523_2954799_-	hypothetical protein	NA	NA	NA	NA
WP_011396710.1\|2954795_2954966_-	hypothetical protein	NA	NA	NA	NA
WP_011396711.1\|2954962_2955289_-	hypothetical protein	NA	NA	NA	NA
WP_011396712.1\|2955299_2955644_-	hypothetical protein	NA	NA	NA	NA
WP_011396713.1\|2955734_2956076_-	phage antirepressor KilAC domain-containing protein	NA	NA	NA	NA
WP_011396714.1\|2956079_2956529_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011396715.1\|2956611_2956770_-	hypothetical protein	NA	NA	NA	NA
WP_011396716.1\|2956809_2956971_-	hypothetical protein	NA	NA	NA	NA
WP_011396717.1\|2957109_2957532_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041598627.1\|2957576_2957846_-	hypothetical protein	NA	NA	NA	NA
WP_148212562.1\|2957842_2958391_-	hypothetical protein	NA	NA	NA	NA
WP_011396720.1\|2958550_2958997_-	response regulator	NA	NA	NA	NA
WP_041598628.1\|2959108_2959792_-	S24 family peptidase	NA	NA	NA	NA
WP_011396723.1\|2960947_2961310_+	hypothetical protein	NA	NA	NA	NA
WP_158304958.1\|2961445_2961595_+	hypothetical protein	NA	NA	NA	NA
WP_011396725.1\|2961718_2964190_+	toprim domain-containing protein	A0A2H4JF22	uncultured_Caudovirales_phage	7.3e-119	43.5
WP_011396727.1\|2964570_2964957_+	hypothetical protein	NA	NA	NA	NA
WP_011396728.1\|2965223_2965730_+	hypothetical protein	NA	NA	NA	NA
WP_011396729.1\|2965733_2966429_+	phage protein	A0A0R6PCH4	Moraxella_phage	1.1e-11	29.9
WP_011396730.1\|2966659_2967079_+	N-acetylmuramoyl-L-alanine amidase	L7TML5	Rhizobium_phage	4.4e-40	55.6
WP_011396731.1\|2967085_2967415_+	hypothetical protein	NA	NA	NA	NA
WP_011396732.1\|2967411_2967786_+	hypothetical protein	NA	NA	NA	NA
WP_011396734.1\|2967939_2969304_+	hypothetical protein	NA	NA	NA	NA
2968552:2968568	attR	NA	NA	NA	NA
WP_011396735.1\|2969303_2970464_+	hypothetical protein	NA	NA	NA	NA
WP_041598633.1\|2970460_2970814_+	hypothetical protein	NA	NA	NA	NA
WP_011396736.1\|2970931_2971456_+\|terminase	terminase small subunit	A0A2D1GMW4	Marinobacter_phage	9.6e-37	54.1
WP_083769765.1\|2971430_2973365_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	3.7e-243	65.1
WP_041598634.1\|2973364_2973574_+	hypothetical protein	K7PM10	Enterobacteria_phage	1.2e-09	54.5
WP_011396738.1\|2973570_2975139_+\|portal	phage portal protein	A0A2D1GMV5	Marinobacter_phage	2.3e-203	65.7
WP_011396739.1\|2975179_2976463_+	S49 family peptidase	A0A2D1GN02	Marinobacter_phage	8.0e-101	47.7
WP_011396740.1\|2976502_2976865_+\|head	head decoration protein	A0A2D1GMY6	Marinobacter_phage	6.7e-21	47.4
WP_011396741.1\|2976920_2977928_+\|capsid	major capsid protein	A0A2D1GN39	Marinobacter_phage	6.1e-88	49.4
WP_011396742.1\|2977990_2978182_+	hypothetical protein	NA	NA	NA	NA
WP_011396743.1\|2978181_2978475_+	hypothetical protein	NA	NA	NA	NA
WP_011396744.1\|2978471_2979056_+\|tail	phage tail protein	NA	NA	NA	NA
WP_011396745.1\|2979052_2979499_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_011396746.1\|2979513_2980257_+	hypothetical protein	G8DCS4	Silicibacter_phage	3.2e-09	30.8
WP_011396747.1\|2980272_2980590_+	hypothetical protein	A0A1B0YZV7	Pseudomonas_phage	3.9e-09	40.3
WP_011396748.1\|2980699_2983051_+	hypothetical protein	A0A0F7L9V3	uncultured_marine_virus	1.5e-12	29.3

DBSCAN-SWA_4

4658283 : 4680174

Pseudomonas_phage(33.33%)

head,portal,capsid,protease,integrase,terminase,tail

attL 4653265:4653279|attR 4667499:4667513

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4653265:4653279	attL	NA	NA	NA	NA
WP_148212633.1\|4658283_4658865_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	8.8e-15	35.5
WP_011398303.1\|4659749_4660463_-	hypothetical protein	NA	NA	NA	NA
WP_041598825.1\|4660531_4661098_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_011398304.1\|4661185_4661425_-	hypothetical protein	NA	NA	NA	NA
WP_041598827.1\|4661490_4661772_-	hypothetical protein	NA	NA	NA	NA
WP_011398305.1\|4661889_4662339_-	hypothetical protein	NA	NA	NA	NA
WP_041598828.1\|4662439_4662892_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_011398307.1\|4662988_4663318_-	hypothetical protein	NA	NA	NA	NA
WP_011398308.1\|4663632_4668876_-	fibronectin type III domain-containing protein	NA	NA	NA	NA
4667499:4667513	attR	NA	NA	NA	NA
WP_011398309.1\|4669083_4669827_-	hypothetical protein	NA	NA	NA	NA
WP_011398311.1\|4670211_4670604_-	hypothetical protein	NA	NA	NA	NA
WP_011398312.1\|4670603_4672469_-	hypothetical protein	A0A1J0GWA6	Alteromonas_phage	4.0e-45	29.7
WP_011398314.1\|4672722_4673088_-	hypothetical protein	G9FHI3	Rhodococcus_phage	6.7e-21	44.6
WP_011398315.1\|4673101_4673518_-	hypothetical protein	NA	NA	NA	NA
WP_011398316.1\|4673520_4673895_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_011398317.1\|4673891_4674392_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_011398318.1\|4674388_4674727_-\|head	phage head closure protein	K7PH08	Enterobacteria_phage	1.8e-15	40.0
WP_011398319.1\|4674723_4675011_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_011398320.1\|4675010_4676204_-\|capsid	phage major capsid protein	A0A2D1GNH4	Pseudomonas_phage	1.6e-127	56.9
WP_011398321.1\|4676209_4676767_-\|head,protease	HK97 family phage prohead protease	A0A2D1GNL2	Pseudomonas_phage	7.8e-61	69.8
WP_011398322.1\|4676756_4677965_-\|portal	phage portal protein	U5P411	Shigella_phage	7.7e-106	49.5
WP_011398323.1\|4677964_4679683_-\|terminase	terminase large subunit	A0A1V0E8C2	Vibrio_phage	1.0e-212	62.2
WP_011398324.1\|4679697_4680174_-\|terminase	phage terminase small subunit P27 family	A0A2D1GNP3	Pseudomonas_phage	1.2e-49	59.4

DBSCAN-SWA_5

5067328 : 5077087

Bacillus_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011398692.1\|5067328_5068678_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.6e-86	41.2
WP_011398693.1\|5068703_5069693_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.1e-52	37.0
WP_049781057.1\|5069736_5070261_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	7.2e-08	48.0
WP_011398695.1\|5070338_5072216_-	acyltransferase	B5WZU0	Pseudomonas_phage	4.3e-95	41.1
WP_011398696.1\|5072350_5073931_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.9e-19	34.4
WP_011398697.1\|5074115_5075585_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	7.5e-95	42.6
WP_011398698.1\|5075752_5077087_+	exodeoxyribonuclease VII large subunit	A0A1B3AYB4	Gordonia_phage	2.7e-35	31.6

DBSCAN-SWA_6

5735067 : 5806328

Acidithiobacillus_phage(37.5%)

head,portal,capsid,tRNA,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011399332.1\|5735067_5735484_-\|transposase	transposase	NA	NA	NA	NA
WP_011395272.1\|5735674_5736073_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041598922.1\|5736513_5737197_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_041598923.1\|5737722_5738424_+	hypothetical protein	NA	NA	NA	NA
WP_041598924.1\|5738505_5739459_-	hypothetical protein	NA	NA	NA	NA
WP_011399338.1\|5739458_5740634_-	hypothetical protein	NA	NA	NA	NA
WP_011399339.1\|5740885_5741206_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011399340.1\|5741399_5741816_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_041598925.1\|5741987_5742581_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011399344.1\|5742995_5743487_+	DUF2924 domain-containing protein	NA	NA	NA	NA
WP_011399345.1\|5743483_5744839_+	recombinase family protein	K4ICM1	Acidithiobacillus_phage	6.4e-133	56.0
WP_011399346.1\|5744835_5745264_+	hypothetical protein	NA	NA	NA	NA
WP_011399347.1\|5745279_5745798_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011399348.1\|5745794_5746073_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_011399350.1\|5746437_5747580_-	hypothetical protein	NA	NA	NA	NA
WP_011399351.1\|5747720_5748272_+	DNA repair protein RadC	NA	NA	NA	NA
WP_011399353.1\|5748621_5749146_+	hypothetical protein	NA	NA	NA	NA
WP_011395130.1\|5749499_5751041_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	1.6e-143	50.0
WP_011395129.1\|5751052_5751808_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	3.1e-68	54.5
WP_148212661.1\|5752312_5752777_+	hypothetical protein	NA	NA	NA	NA
WP_158304993.1\|5752906_5753080_+	hypothetical protein	NA	NA	NA	NA
WP_011399356.1\|5753239_5753959_-	HNH endonuclease	NA	NA	NA	NA
WP_148212662.1\|5754096_5754528_-	hypothetical protein	NA	NA	NA	NA
WP_085944396.1\|5755657_5756480_-\|transposase	IS5-like element ISHch3 family transposase	A0A0N9SHJ4	Paenibacillus_phage	9.6e-07	33.8
WP_011399357.1\|5756723_5757680_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_011399358.1\|5757936_5758506_-	hypothetical protein	NA	NA	NA	NA
WP_148212663.1\|5771524_5772013_+	hypothetical protein	NA	NA	NA	NA
WP_083769887.1\|5772523_5772769_-	hypothetical protein	A0A2I7RR25	Vibrio_phage	3.9e-09	43.5
WP_049781088.1\|5773062_5773467_-	hypothetical protein	A0A0F7L7H5	uncultured_marine_virus	3.2e-08	38.3
WP_011399364.1\|5773485_5773776_-	hypothetical protein	K4I011	Acidithiobacillus_phage	4.1e-21	65.4
WP_011399365.1\|5773835_5774189_-	DUF2793 domain-containing protein	A0A248XD01	Klebsiella_phage	6.9e-23	42.3
WP_011399366.1\|5774188_5776375_-	hypothetical protein	A0A2K8HP68	Pseudomonas_phage	1.1e-179	46.1
WP_011399367.1\|5776364_5776580_-	hypothetical protein	A0A2D0W9W6	Bordetella_phage	3.6e-14	62.9
WP_011399368.1\|5776576_5776810_-	hypothetical protein	A0A0S0N2N8	Pseudomonas_phage	3.4e-18	59.7
WP_011399369.1\|5776819_5777629_-	phage BR0599 family protein	A9J4Y0	Pseudomonas_phage	1.1e-63	43.9
WP_011399370.1\|5777625_5779317_-	hypothetical protein	J9SU43	Pseudomonas_phage	2.4e-89	38.4
WP_011399371.1\|5779319_5780252_-	hypothetical protein	NA	NA	NA	NA
WP_011399372.1\|5780251_5781496_-	phage protein	A0A2D1GMZ0	Marinobacter_phage	2.6e-32	36.0
WP_011399373.1\|5781505_5784715_-	tape measure protein	A0A125RN77	Pseudomonas_phage	2.9e-35	27.9
WP_011399374.1\|5784717_5785365_-	hypothetical protein	NA	NA	NA	NA
WP_011399375.1\|5785354_5785546_-	hypothetical protein	NA	NA	NA	NA
WP_011399376.1\|5785542_5785932_-	hypothetical protein	NA	NA	NA	NA
WP_011399377.1\|5785940_5786693_-	hypothetical protein	A0A2D2W2E0	Stenotrophomonas_phage	4.6e-56	47.6
WP_011399378.1\|5786695_5786875_-	hypothetical protein	NA	NA	NA	NA
WP_011399379.1\|5786871_5787306_-	hypothetical protein	NA	NA	NA	NA
WP_011399380.1\|5787302_5787602_-	hypothetical protein	NA	NA	NA	NA
WP_011399381.1\|5787598_5788600_-\|capsid	major capsid protein	A0A1B2LRS0	Wolbachia_phage	1.3e-114	67.6
WP_011399382.1\|5788622_5788994_-\|head	head decoration protein	A0A1B2LRT0	Wolbachia_phage	9.5e-23	52.0
WP_011399383.1\|5788997_5790221_-	S49 family peptidase	E9P618	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	2.1e-50	37.1
WP_011399384.1\|5790228_5791701_-\|portal	phage portal protein	A0A1B2LRR5	Wolbachia_phage	2.2e-147	57.5
WP_011399385.1\|5791700_5791904_-	hypothetical protein	A0A2H4JCJ9	uncultured_Caudovirales_phage	8.0e-16	72.3
WP_011399386.1\|5791911_5793879_-\|terminase	phage terminase large subunit family protein	A0A2H4JIC6	uncultured_Caudovirales_phage	0.0e+00	78.6
WP_011399387.1\|5793875_5794388_-	hypothetical protein	A0A2H4JCL4	uncultured_Caudovirales_phage	1.1e-64	73.7
WP_041598929.1\|5794712_5795231_-	hypothetical protein	NA	NA	NA	NA
WP_011399389.1\|5795571_5796084_+	DUF3489 domain-containing protein	K4HZZ2	Acidithiobacillus_phage	3.7e-25	45.7
WP_011399390.1\|5796160_5796436_+	hypothetical protein	NA	NA	NA	NA
WP_011399391.1\|5796495_5796777_+	hypothetical protein	NA	NA	NA	NA
WP_011399393.1\|5796930_5797290_+	hypothetical protein	NA	NA	NA	NA
WP_011399394.1\|5797385_5797742_+	hypothetical protein	K4ICP1	Acidithiobacillus_phage	6.1e-35	64.9
WP_011399395.1\|5797745_5798423_-	hypothetical protein	NA	NA	NA	NA
WP_041599949.1\|5798477_5799716_-	site-specific DNA-methyltransferase	A0A2H4JGF1	uncultured_Caudovirales_phage	9.2e-179	75.8
WP_011399397.1\|5800111_5800507_-	RNA polymerase subunit sigma	NA	NA	NA	NA
WP_011399398.1\|5800499_5800712_-	hypothetical protein	NA	NA	NA	NA
WP_011399399.1\|5800698_5801178_-	hypothetical protein	K4ICN3	Acidithiobacillus_phage	7.2e-55	66.7
WP_011399400.1\|5801294_5803571_-	hypothetical protein	K4HZY1	Acidithiobacillus_phage	6.9e-297	64.7
WP_011399401.1\|5803567_5804314_-\|tRNA	isoleucyl-tRNA synthetase	K4HZA0	Acidithiobacillus_phage	2.2e-103	71.7
WP_011399402.1\|5804310_5804769_-	hypothetical protein	K4I3X7	Acidithiobacillus_phage	1.5e-38	49.7
WP_011399403.1\|5804844_5805456_-	hypothetical protein	K4ICM8	Acidithiobacillus_phage	1.5e-65	62.8
WP_011399404.1\|5805452_5806328_-	ATP-binding protein	K4HZX9	Acidithiobacillus_phage	8.6e-107	68.4

DBSCAN-SWA_7

6084374 : 6091719

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011399663.1\|6084374_6084851_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.1e-28	48.6
WP_011399664.1\|6084872_6086009_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	M4QPK3	Synechococcus_phage	1.3e-38	43.2
WP_011399665.1\|6086057_6086726_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.7e-30	39.7
WP_041598961.1\|6086727_6087846_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.3e-43	31.8
WP_011399667.1\|6087845_6088358_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_011399668.1\|6088415_6089672_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	3.7e-95	51.0
WP_011399669.1\|6090057_6091719_+	energy-dependent translational throttle protein EttA	A0A2K9L3Z8	Tupanvirus	4.1e-41	27.7

DBSCAN-SWA_8

6867572 : 6898516

Pseudomonas_phage(45.83%)

head,portal,capsid,integrase,plate,holin,terminase,tail

attL 6861361:6861376|attR 6896079:6896094

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6861361:6861376	attL	NA	NA	NA	NA
WP_011400426.1\|6867572_6868586_-\|integrase	tyrosine-type recombinase/integrase	F1BUN9	Cronobacter_phage	1.4e-76	45.5
WP_011400427.1\|6868585_6868903_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_011400428.1\|6869397_6872052_+	toprim domain-containing protein	A0A0U3TH43	Pseudomonas_phage	4.4e-162	36.0
WP_011400429.1\|6872509_6873064_+	hypothetical protein	NA	NA	NA	NA
WP_011400431.1\|6873211_6873400_+	hypothetical protein	NA	NA	NA	NA
WP_011400432.1\|6873464_6874034_+	3'-5' exonuclease	A0A1D9C9N8	Salinivibrio_phage	6.3e-34	46.7
WP_041599035.1\|6874402_6874975_+	hypothetical protein	NA	NA	NA	NA
WP_011400435.1\|6875003_6875360_+	hypothetical protein	NA	NA	NA	NA
WP_041599036.1\|6875364_6876225_-	hypothetical protein	NA	NA	NA	NA
WP_041599037.1\|6876719_6877241_-	hypothetical protein	NA	NA	NA	NA
WP_011400437.1\|6877621_6877828_+	hypothetical protein	NA	NA	NA	NA
WP_011400438.1\|6877820_6878084_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	2.7e-11	42.2
WP_011400439.1\|6878142_6879135_-\|portal	phage portal protein	A5X9H1	Aeromonas_virus	6.9e-76	50.0
WP_011400440.1\|6879149_6880895_-	hypothetical protein	A0A1L5C295	Pseudoalteromonas_phage	1.6e-149	47.0
WP_011400441.1\|6881054_6881867_+\|capsid	GPO family capsid scaffolding protein	Q94MZ5	Haemophilus_virus	2.2e-35	38.8
WP_011400442.1\|6881892_6882930_+\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	2.5e-84	52.8
WP_011400443.1\|6883021_6883723_+\|terminase	terminase	U3PCG2	Vibrio_phage	1.1e-11	30.6
WP_011400444.1\|6883822_6884287_+\|head	head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	2.5e-28	47.4
WP_011400445.1\|6884286_6884775_+\|tail	phage tail protein	NA	NA	NA	NA
WP_011400446.1\|6884749_6885412_+	phage virion morphogenesis protein	A0A1D9C9S1	Salinivibrio_phage	1.2e-39	41.6
WP_011400447.1\|6885414_6886518_+	DUF2586 domain-containing protein	A0A0U4KLE6	Pseudomonas_phage	1.2e-100	53.1
WP_011394376.1\|6886536_6886992_+	DUF2597 family protein	A0A0U3TH58	Pseudomonas_phage	4.6e-43	54.8
WP_041599039.1\|6886995_6887232_+	hypothetical protein	G3EN77	Psychrobacter_phage	9.7e-05	35.1
WP_011400448.1\|6887228_6887822_+	hypothetical protein	NA	NA	NA	NA
WP_011400449.1\|6887818_6888298_+	hypothetical protein	A0A2I7R2B5	Vibrio_phage	6.1e-38	54.2
WP_011400450.1\|6888301_6888532_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_011400451.1\|6888503_6888788_+\|tail	putative phage tail assembly chaperone	A0A1D9C9R9	Salinivibrio_phage	7.8e-09	36.8
WP_011400452.1\|6888971_6890996_+\|tail	phage tail tape measure protein	A0A2I7RNI7	Vibrio_phage	5.1e-118	41.2
WP_011400453.1\|6890999_6891317_+	DUF2590 family protein	A0A0U4B0N5	Pseudomonas_phage	4.0e-14	41.2
WP_011400454.1\|6891313_6892483_+\|plate	baseplate J/gp47 family protein	A0A0U4JJ14	Pseudomonas_phage	2.7e-124	59.5
WP_011400455.1\|6892479_6893004_+\|tail	phage tail protein	A0A0U4JVX3	Pseudomonas_phage	4.1e-64	65.5
WP_011400456.1\|6893013_6894711_+\|tail	phage tail protein	A0A0U4K5K2	Pseudomonas_phage	2.4e-60	45.9
WP_011400457.1\|6894725_6895322_+	hypothetical protein	NA	NA	NA	NA
WP_011400458.1\|6895318_6896221_+	hypothetical protein	NA	NA	NA	NA
6896079:6896094	attR	NA	NA	NA	NA
WP_011400459.1\|6896217_6896739_+	hypothetical protein	A0A0U4J942	Pseudomonas_phage	9.9e-26	45.5
WP_011400460.1\|6896735_6897449_+	hypothetical protein	A0A2I7RNK1	Vibrio_phage	4.2e-35	35.5
WP_011400461.1\|6897424_6898516_+	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	2.7e-57	40.4

DBSCAN-SWA_9

7101708 : 7116649

Roseobacter_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011400653.1\|7101708_7103745_-	elongation factor G	A0A1S5SF82	Streptococcus_phage	1.4e-59	27.5
WP_011400657.1\|7104382_7105762_-	nicotinate phosphoribosyltransferase	A0A1B0V392	Roseobacter_phage	2.2e-149	59.3
WP_011400658.1\|7105843_7106917_-	bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase	A0A1B0V161	Roseobacter_phage	2.0e-89	48.2
WP_011400659.1\|7107060_7108062_-	AAA family ATPase	A0A218KBV7	Bacillus_phage	2.3e-23	28.4
WP_011400660.1\|7108048_7108678_-	nicotinamide mononucleotide transporter	NA	NA	NA	NA
WP_011400661.1\|7108801_7109542_+	NUDIX hydrolase	G3MA14	Bacillus_virus	8.0e-29	32.5
WP_011400662.1\|7109557_7110037_+	NADAR family protein	A0A141ZK81	Faustovirus	4.7e-38	52.5
WP_011400663.1\|7110014_7110362_+	hypothetical protein	NA	NA	NA	NA
WP_011400664.1\|7110449_7113770_+	DEAD/DEAH box helicase	Q9YNZ9	Choristoneura_fumiferana_nuclear_polyhedrosis_virus	1.6e-47	29.6
WP_011400665.1\|7113781_7114717_+	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	2.5e-80	50.3
WP_011400666.1\|7114745_7115510_+	thioesterase	NA	NA	NA	NA
WP_011400669.1\|7115779_7116649_+	RNA ligase family protein	U5J9W3	Bacillus_phage	9.5e-05	30.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_007645

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection