CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_007777	Frankia casuarinae, complete sequence	13 crisprs	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,WYL,csa3,DEDDh,RT,cas4,cas3,cas8c	1	31	15	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_007777_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_1

32161-34505

TypeI-E

Consensus_repeat	Method
GTCGTCCCCGCACGCGCGGGGATCTTCC	PILER-CR
GTCGTCCCCGCACGCGCGGGGATCTTCC	CRISPRCasFinder
GTCGTCCCCGCACGCGCGGGGATCTTCC	CRT

38 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_007777_1

>merge|NC_007777|1|32161-34505|PILER-CR,CRISPRCasFinder,CRT
GTCGTCCCCGCACGCGCGGGGATCTTCCTGTCAGCCCGAAAGATCTCCGGTGGCCGTCGGCGTCGTCCCCGCACGCGCGGGGATCTTCCCCGCAGCAGTGTTCACCCGCGCATGTCTGTTACGTCGTCCCCGCACGCGCGGGGATCTTCCCGAGATGAAACACAGCAGCTCGACAGGGGTGCCGTCGTCCCCGCACGCGCGGGGATCTTCCCTCGGCCCAGCCCATCCGCTCGATGGCGCAGCGGTCGTCCCCGCACGCGCGGGGATCTTCCCTCCCTCGCCGAGATGTGGGTGCTCACCCGCTGGTCGTCCCCGCACGCGCGGGGATCTTCCCGGCTCTACGCCCTGCACCACGTCGACATCGCCGTCGTCCCCGCACGCGCGGGGATCTTCCCCAGAACATGACCACGGTCGGCTGTCGCGCGCTGTCGTCCCCGCACGCGCGGGGATCTTCCCCGTCTCCGCGGACTCGACCAGTCACCCATGCCGTCGTCCCCGCACGCGCGGGGATCTTCCGGTTCCCGAGCATCGACCGGGCGGCCTGCGACCGTCGTCCCCGCACGCGCGGGGATCTTCCGGTCTCGTGCATTCCGATCGCGGCCGCGGCGGCGTCGTCCCCGCACGCGCGGGGATCTTCCTATTTTCCGGAGCTTTGAAACCCATTGCTTAGTCGTCCCCGCACGCGCGGGGATCTTCCCATTGCGGTCCTGCACAGTCATCCAGACCAGGGGTCGTCCCCGCACGCGCGGGGATCTTCCTCCCAGAGGGCAGTCCTGGAGTGGTGGCGCCCGGTCGTCCCCGCACGCGCGGGGATCTTCCCCTCGACGTACACCACAAGCGGCTACACGCCGAGTCGTCCCCGCACGCGCGGGGATCTTCCGAGCATCCGTCGGCTCCAGCTCGGCTGAGGCCGGTCGTCCCCGCACGCGCGGGGATCTTCCTTCGGGTGAAGAAAGCCGCGCGCAATCGCATTCGTCGTCCCCGCACGCGCGGGGATCTTCCGCGGGGGATGAGGTCGGCGGGCACGTGCCAGTGGTCGTCCCCGCACGCGCGGGGATCTTCCTTGAGATGGACGCCGACCACACGGCGCGGATCGGTCGTCCCCGCACGCGCGGGGATCTTCCTCTGCTGTCATATCTGGTGGGTGGAAACCGCCCGTCGTCCCCGCACGCGCGGGGATCTTCCCAGATCGGACCGGCCGGCTGGGGCTCCCACCGCGTCGTCCCCGCACGCGCGGGGATCTTCCGCGCATGGGGTTGCAACTCCGCACCGCCCGGCAGTCGTCCCCGCACGCGCGGGGATCTTCCGGACGAGATTGCGGCGATCGGAAACGAGATCGTGTCGTCCCCGCACGCGCGGGGATCTTCCGCCTGGCCCGGCCCGGCCGCGGGGTCGGGATGAGTCGTCCCCGCACGCGCGGGGATCTTCCCTTCCCATCGACCCACAGCTAGGCATCCTGGACGTCGTCCCCGCACGCGCGGGGATCTTCCTGGCCCAGACGTGGGCCGACGACCAGCGCAATCGTCGTCCCCGCACGCGCGGGGATCTTCCTTCCAGCCTCATCCCGCCACCAACGTCCCGCAGGTCGTCCCCGCACGCGCGGGGATCTTCCCCCGAGGTCTTCGAGAAGGTAGAGGCTTCCCGGGTCGTCCCCGCACGCGCGGGGATCTTCCTAGCGGGACCGTCCGGGGCTGCAACCCCCGGACGGTCGTCCCCGCACGCGCGGGGATCTTCCCCCGTCGTCGCTGACCGCGCCCAACTTCGCGGCGTCGTCCCCGCACGCGCGGGGATCTTCCCCGTGCCCGTTCCCGGGCGATCCGCGCGCGCATGTCGTCCCCGCACGCGCGGGGATCTTCCTCTCGCCATCCAGAAAGTTGCCGGTTCCAGAGGGTCGTCCCCGCACGCGCGGGGATCTTCCTGCGCCGCGATGCGGCATGAGCGGCTTGTCGTCGTCGTCCCCGCACGCGCGGGGATCTTCCCCTACACCATGGACGACGTCAACGCTATGGCTGGTCGTCCCCGCACGCGCGGGGATCTTCCTTCGGGTGAAGAAAGCCGCGCGCAATCGCATTCGTCGTCCCCGCACGCGCGGGGATCTTCCCCTCAGATGAGGTGGGAAAGCTTGCCTTCGCGGGTCGTCCCCGCACGCGCGGGGATCTTCCTTGAGATGGACGCCGACCACACGGCGCGGATCGGTCGTCCCCGCACGCGCGGGGATCTTCCCCCCCACCCCTGTTTTCGAGGAGACCCCACGATGTCGTCCCCGCACGCGCGGGGATCTTCCCATCCAGGAAGGAGCAGACCGTGACCGTCGAGCGTCGTCCCCGCACGCGCGGGGATCTTCC

>NC_007777|1|1|32161-34505|PILER-CR
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGTCAGCCCGAAAGATCTCCGGTGGCCGTCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGCAGCAGTGTTCACCCGCGCATGTCTGTTAC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CGAGATGAAACACAGCAGCTCGACAGGGGTGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTCGGCCCAGCCCATCCGCTCGATGGCGCAGCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTCCCTCGCCGAGATGTGGGTGCTCACCCGCTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CGGCTCTACGCCCTGCACCACGTCGACATCGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCAGAACATGACCACGGTCGGCTGTCGCGCGCT
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGTCTCCGCGGACTCGACCAGTCACCCATGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGTTCCCGAGCATCGACCGGGCGGCCTGCGACC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGTCTCGTGCATTCCGATCGCGGCCGCGGCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TATTTTCCGGAGCTTTGAAACCCATTGCTTA
GTCGTCCCCGCACGCGCGGGGATCTTCC	CATTGCGGTCCTGCACAGTCATCCAGACCAGGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCCCAGAGGGCAGTCCTGGAGTGGTGGCGCCCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTCGACGTACACCACAAGCGGCTACACGCCGA
GTCGTCCCCGCACGCGCGGGGATCTTCC	GAGCATCCGTCGGCTCCAGCTCGGCTGAGGCCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCGGGTGAAGAAAGCCGCGCGCAATCGCATTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCGGGGGATGAGGTCGGCGGGCACGTGCCAGTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTGAGATGGACGCCGACCACACGGCGCGGATCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCTGCTGTCATATCTGGTGGGTGGAAACCGCCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CAGATCGGACCGGCCGGCTGGGGCTCCCACCGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCGCATGGGGTTGCAACTCCGCACCGCCCGGCA
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGACGAGATTGCGGCGATCGGAAACGAGATCGT
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCCTGGCCCGGCCCGGCCGCGGGGTCGGGATGA
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTTCCCATCGACCCACAGCTAGGCATCCTGGAC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGGCCCAGACGTGGGCCGACGACCAGCGCAATC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCCAGCCTCATCCCGCCACCAACGTCCCGCAG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCGAGGTCTTCGAGAAGGTAGAGGCTTCCCGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TAGCGGGACCGTCCGGGGCTGCAACCCCCGGACG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCGTCGTCGCTGACCGCGCCCAACTTCGCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGTGCCCGTTCCCGGGCGATCCGCGCGCGCAT
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCTCGCCATCCAGAAAGTTGCCGGTTCCAGAGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGCGCCGCGATGCGGCATGAGCGGCTTGTCGTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTACACCATGGACGACGTCAACGCTATGGCTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCGGGTGAAGAAAGCCGCGCGCAATCGCATTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTCAGATGAGGTGGGAAAGCTTGCCTTCGCGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTGAGATGGACGCCGACCACACGGCGCGGATCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCCCACCCCTGTTTTCGAGGAGACCCCACGAT
GTCGTCCCCGCACGCGCGGGGATCTTCC	CATCCAGGAAGGAGCAGACCGTGACCGTCGAGC
GTCGTCCCCGCACGCGCGGGGATCTTCC

>NC_007777|1|1|32161-34505|CRISPRCasFinder
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGTCAGCCCGAAAGATCTCCGGTGGCCGTCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGCAGCAGTGTTCACCCGCGCATGTCTGTTAC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CGAGATGAAACACAGCAGCTCGACAGGGGTGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTCGGCCCAGCCCATCCGCTCGATGGCGCAGCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTCCCTCGCCGAGATGTGGGTGCTCACCCGCTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CGGCTCTACGCCCTGCACCACGTCGACATCGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCAGAACATGACCACGGTCGGCTGTCGCGCGCT
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGTCTCCGCGGACTCGACCAGTCACCCATGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGTTCCCGAGCATCGACCGGGCGGCCTGCGACC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGTCTCGTGCATTCCGATCGCGGCCGCGGCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TATTTTCCGGAGCTTTGAAACCCATTGCTTA
GTCGTCCCCGCACGCGCGGGGATCTTCC	CATTGCGGTCCTGCACAGTCATCCAGACCAGGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCCCAGAGGGCAGTCCTGGAGTGGTGGCGCCCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTCGACGTACACCACAAGCGGCTACACGCCGA
GTCGTCCCCGCACGCGCGGGGATCTTCC	GAGCATCCGTCGGCTCCAGCTCGGCTGAGGCCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCGGGTGAAGAAAGCCGCGCGCAATCGCATTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCGGGGGATGAGGTCGGCGGGCACGTGCCAGTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTGAGATGGACGCCGACCACACGGCGCGGATCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCTGCTGTCATATCTGGTGGGTGGAAACCGCCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CAGATCGGACCGGCCGGCTGGGGCTCCCACCGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCGCATGGGGTTGCAACTCCGCACCGCCCGGCA
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGACGAGATTGCGGCGATCGGAAACGAGATCGT
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCCTGGCCCGGCCCGGCCGCGGGGTCGGGATGA
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTTCCCATCGACCCACAGCTAGGCATCCTGGAC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGGCCCAGACGTGGGCCGACGACCAGCGCAATC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCCAGCCTCATCCCGCCACCAACGTCCCGCAG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCGAGGTCTTCGAGAAGGTAGAGGCTTCCCGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TAGCGGGACCGTCCGGGGCTGCAACCCCCGGACG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCGTCGTCGCTGACCGCGCCCAACTTCGCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGTGCCCGTTCCCGGGCGATCCGCGCGCGCAT
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCTCGCCATCCAGAAAGTTGCCGGTTCCAGAGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGCGCCGCGATGCGGCATGAGCGGCTTGTCGTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTACACCATGGACGACGTCAACGCTATGGCTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCGGGTGAAGAAAGCCGCGCGCAATCGCATTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTCAGATGAGGTGGGAAAGCTTGCCTTCGCGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTGAGATGGACGCCGACCACACGGCGCGGATCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCCCACCCCTGTTTTCGAGGAGACCCCACGAT
GTCGTCCCCGCACGCGCGGGGATCTTCC	CATCCAGGAAGGAGCAGACCGTGACCGTCGAGC
GTCGTCCCCGCACGCGCGGGGATCTTCC

>NC_007777|1|1|32161-34505|CRT
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGTCAGCCCGAAAGATCTCCGGTGGCCGTCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGCAGCAGTGTTCACCCGCGCATGTCTGTTAC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CGAGATGAAACACAGCAGCTCGACAGGGGTGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTCGGCCCAGCCCATCCGCTCGATGGCGCAGCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTCCCTCGCCGAGATGTGGGTGCTCACCCGCTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CGGCTCTACGCCCTGCACCACGTCGACATCGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCAGAACATGACCACGGTCGGCTGTCGCGCGCT
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGTCTCCGCGGACTCGACCAGTCACCCATGCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGTTCCCGAGCATCGACCGGGCGGCCTGCGACC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGTCTCGTGCATTCCGATCGCGGCCGCGGCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TATTTTCCGGAGCTTTGAAACCCATTGCTTA
GTCGTCCCCGCACGCGCGGGGATCTTCC	CATTGCGGTCCTGCACAGTCATCCAGACCAGGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCCCAGAGGGCAGTCCTGGAGTGGTGGCGCCCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTCGACGTACACCACAAGCGGCTACACGCCGA
GTCGTCCCCGCACGCGCGGGGATCTTCC	GAGCATCCGTCGGCTCCAGCTCGGCTGAGGCCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCGGGTGAAGAAAGCCGCGCGCAATCGCATTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCGGGGGATGAGGTCGGCGGGCACGTGCCAGTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTGAGATGGACGCCGACCACACGGCGCGGATCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCTGCTGTCATATCTGGTGGGTGGAAACCGCCC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CAGATCGGACCGGCCGGCTGGGGCTCCCACCGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCGCATGGGGTTGCAACTCCGCACCGCCCGGCA
GTCGTCCCCGCACGCGCGGGGATCTTCC	GGACGAGATTGCGGCGATCGGAAACGAGATCGT
GTCGTCCCCGCACGCGCGGGGATCTTCC	GCCTGGCCCGGCCCGGCCGCGGGGTCGGGATGA
GTCGTCCCCGCACGCGCGGGGATCTTCC	CTTCCCATCGACCCACAGCTAGGCATCCTGGAC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGGCCCAGACGTGGGCCGACGACCAGCGCAATC
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCCAGCCTCATCCCGCCACCAACGTCCCGCAG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCGAGGTCTTCGAGAAGGTAGAGGCTTCCCGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TAGCGGGACCGTCCGGGGCTGCAACCCCCGGACG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCGTCGTCGCTGACCGCGCCCAACTTCGCGGC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCGTGCCCGTTCCCGGGCGATCCGCGCGCGCAT
GTCGTCCCCGCACGCGCGGGGATCTTCC	TCTCGCCATCCAGAAAGTTGCCGGTTCCAGAGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TGCGCCGCGATGCGGCATGAGCGGCTTGTCGTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTACACCATGGACGACGTCAACGCTATGGCTG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTCGGGTGAAGAAAGCCGCGCGCAATCGCATTC
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCTCAGATGAGGTGGGAAAGCTTGCCTTCGCGG
GTCGTCCCCGCACGCGCGGGGATCTTCC	TTGAGATGGACGCCGACCACACGGCGCGGATCG
GTCGTCCCCGCACGCGCGGGGATCTTCC	CCCCCACCCCTGTTTTCGAGGAGACCCCACGAT
GTCGTCCCCGCACGCGCGGGGATCTTCC	CATCCAGGAAGGAGCAGACCGTGACCGTCGAGC
GTCGTCCCCGCACGCGCGGGGATCTTCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_011434497.1\|29207_30038_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
NC_007777.1\|WP_023840580.1\|35870_37079_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|367570
NC_007777.1\|WP_023840578.1\|22463_25316_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NC_007777.1\|WP_011434513.1\|45031_45817_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_035957990.1\|43652_45029_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
NC_007777.1\|WP_083503373.1\|39978_41922_-\|conjugal-transfer-protein-TraC	unknown	unknown	gnl\|CDD\|273346
NC_007777.1\|WP_108913672.1\|25696_27331_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|378189
NC_007777.1\|WP_011434504.1\|34524_34953_-\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NC_007777.1\|WP_108913673.1\|18666_20655_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133045
NC_007777.1\|WP_011434514.1\|45886_46303_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_023839952.1\|17126_17810_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NC_007777.1\|WP_011434495.1\|27357_27978_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NC_007777.1\|WP_011434509.1\|39395_39938_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|182339
NC_007777.1\|WP_011434500.1\|31863_32142_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NC_007777.1\|WP_011434507.1\|37684_38491_+\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|182775
NC_007777.1\|WP_011434499.1\|30874_31867_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_007777.1\|WP_011434511.1\|42110_43613_-\|membrane-protein	unknown	unknown	gnl\|CDD\|274857
NC_007777.1\|WP_011434498.1\|30045_30873_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NC_007777.1\|WP_011434508.1\|38910_39249_-\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|198006
NC_007777.1\|WP_011434496.1\|28056_29211_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011434497.1\|29207_30038_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.76876e-47
NC_007777.1\|WP_023840580.1\|35870_37079_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|367570	pfam03583, LIP, Secretory lipase. These lipases are expressed and secreted during the infection cycle of these pathogens. In particular, C. albicans has a large number of different lipases, possibly reflecting broad lipolytic activity, which may contribute to the persistence and virulence of C. albicans in human tissue.	6.74805e-15
NC_007777.1\|WP_023840578.1\|22463_25316_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.27551e-81
NC_007777.1\|WP_035957990.1\|43652_45029_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.000517418
NC_007777.1\|WP_083503373.1\|39978_41922_-\|conjugal-transfer-protein-TraC	gnl\|CDD\|273346	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family. Type IV secretion systems are found in Gram-negative pathogens. They export proteins, DNA, or complexes in different systems and are related to plasmid conjugation systems. This model represents related ATPases that include VirB4 in Agrobacterium tumefaciens (DNA export) CagE in Helicobacter pylori (protein export) and plasmid TraB (conjugation).	1.92735e-11
NC_007777.1\|WP_108913672.1\|25696_27331_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	5.12607e-105
NC_007777.1\|WP_011434504.1\|34524_34953_-\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	2.04106e-65
NC_007777.1\|WP_108913673.1\|18666_20655_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133045	cd06423, CESA_like, CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.	1.12696e-36
NC_007777.1\|WP_023839952.1\|17126_17810_-\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	7.10666e-63
NC_007777.1\|WP_011434495.1\|27357_27978_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	5.09382e-40
NC_007777.1\|WP_011434509.1\|39395_39938_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.57896e-64
NC_007777.1\|WP_011434500.1\|31863_32142_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	9.25338e-43
NC_007777.1\|WP_011434507.1\|37684_38491_+\|VTT-domain-containing-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	7.78997e-57
NC_007777.1\|WP_011434499.1\|30874_31867_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.13285e-133
NC_007777.1\|WP_011434511.1\|42110_43613_-\|membrane-protein	gnl\|CDD\|274857	TIGR03923, T7SS_EccE, type VII secretion protein EccE. This model represents the transmembrane protein EccB of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccE1, EccE2, etc. This model represents a conserved core region, and many members have 200 or more additional C-terminal residues. [Protein fate, Protein and peptide secretion and trafficking].	0.00239322
NC_007777.1\|WP_011434498.1\|30045_30873_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.70408e-65
NC_007777.1\|WP_011434508.1\|38910_39249_-\|P-II-family-nitrogen-regulator	gnl\|CDD\|198006	smart00938, P-II, Nitrogen regulatory protein P-II. P-II modulates the activity of glutamine synthetase.	6.15865e-32
NC_007777.1\|WP_011434496.1\|28056_29211_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.54346e-144

>NC_007777.1|WP_011434500.1|31863_32142_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MTVIVLIATADGLRGHLTRWMIEISAGVFVGNPSARVRDRLWTLLSQRVGDGQAIMIEPATNEQGWAARTAGRNRTQPVDYDGLILFARSRR
>NC_007777.1|WP_011434499.1|30874_31867_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MWWLSNPQDLHRVEDRVSTLYVEKCHVDRDDNAVVLVNKERTVRVPAAFVATVLLGPGTRITSAAVRLLADSGTALCWVGDRGVRMYAAGLGPSRGAGLLMRQAYLVTRTSERLDVARRMYAKRFPDDDVTTATMQQLRGREGARIKKIYRDHATRTGVTWNKRVYTHGDPFADSDDINRLLSAGHSCLYGICHAAIVGIGASPALGFVHTGAATSFVLDIADLYKADYTIPLAFDLAAAGLTDERDIRTAFRDKVADGHLMARIIHDIKDLLIEEGTRDNDEDALHLWDELDGHVPGGVNWAADLADQTDDTTILGVTGPDTDQPPPPW
>NC_007777.1|WP_011434498.1|30045_30873_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTYLSRIWLNPLRTGAQALLKNPQRMHAAVLGGLSRQPVTERVLWRLETGEGLRGADRPHRAEVLVLTESTPSWEHLIEQAGWIHTDEPQVLVRDYQPLLDRLHTGREFRFRLRANTVSATRTPDNPSPAQKEHLAAPRPRGVRVGHRTAAHQTTWLTDRIDRWGFTLLTTADLDGPRNQPDGPRNQPDGPGDTDEPAPALRLTARERLTFPKKAKNTEKTGRRVVLNTATFEGALRVTDPARARATLLHGVGPAKAYGCGLITLAPLHTEQAGR
>NC_007777.1|WP_011434497.1|29207_30038_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQDPPRHCLVLRLAGPLQSWGSRSMFNRRDTLTEPTKSGIIGLLAAAQGRRRTDPIEDLLSLTLGIRTDQPGTLLRDYHTVSDYRGRPLPSAAVSAKGLQKPTSPAKHTHVTERFYLQDAVFVAALAAPEPVLTTLADALRTPAFPLALGRRACPPTHPLLLVPDSEPDAALWSGSALEVLRQVPWQARPDHRDALARRRPPRLRRIDLPVTVDDPDGDDVRIDLPTTFDPHQRGFTSRRVHQSWVHLPPPYELTDADNVEGTTPHHDPFAILGW
>NC_007777.1|WP_011434496.1|28056_29211_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MRCYIDVHILQTVPPSNLNRDDAGTPKQAVYGGVKRARVSSQAWKRATRTAFADHIDQAQLGTRTKRISALLAERLATRCALDAETSTRIATSLLTALKISAGKKAAETAYLLFFGRPQLERLIDLIVEDVPRLADLSDGDLLAAVKDVPVLATLGSDHPIDVALFGRMVADLASLNVDAATQVAHALSTHAVDVEFDYYTAVDDQNAKDETGAGMIGTVEFQSATLYRFATVGLHQLAENLGGDIEATVEALRVFLTAFTTSMPTGHQNSFAHRTVPNLLTIAIRPDQPVNLVSAFEKPVLPRGRGVLTGSLEQFAIELNSASTLWGLQPDILASTYRAPDDTNTNTDTTAMIVKALGEPKPFDEVLDTVVAAARDRLMSSVR
>NC_007777.1|WP_011434495.1|27357_27978_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTEVTAAPSASSTSSETTSPRETTSPRHFWERDHKGDRPDGADLAVLRRGVGREPGSVPEMWRYYSTLTVDGRRTWSLTAEHVALTLFAVHQQSLPTAAYQPGIGLGEAALRLRSSDKFSPEAVDRRFNAVATATTLDEAAYHLRGLVRQFRQVPVGLDYTQLWRDLIAWQTPERIGDVRRRWGAQYFYRPPKDKAATPAAASGTS
>NC_007777.1|WP_108913672.1|25696_27331_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDGQWIPVIKRGRRLEVGIRKALVDAHTIDGLALDDPLEAVAVLRQVLLPVVLDVFGAPRTDEEWSQRWEAGCFDRIIRKDRAEDEEGIESYLIRQAARFHLFHPTAPFAQVAGLRTAKDETKPVSLLVPRLASGNNVPLFSSRTENDPPSLTPAAAARALLAAHCWDTAAIKTGAADDPKVKTGKTMGNPTGPLGQFGIVLPLGETLFHTLMLSIPVLRHGLRQKDRPQWRSESSATSRWETRAPEGLLDLLTWQSRRIRLVPEADPTAVEDVSVRRVVLTAGDRLTGSVHALEPHTAWRQVDKPKADEPPVRPVRHQPGRSAWRGLEALLTTTPLSSDKVFAPTALSQLARLRDDGYVPDDLPLQVLTVGVKYGTQSAVIDEVMADEIPLPVTALARDSAVRETVLAVAAQAESLRIAANRLGDDLREAAGATDKLPWDKGQRLGEILIHSFNPTVHRLLAGLQQHPEDAKRAELAWRILARRLAWEVVDPVLSAAGPETFLGRDPGEPFGARLAGAEMSFRRTLNDVLGKDEDNRLALAAA
>NC_007777.1|WP_023840578.1|22463_25316_+|CRISPR-associated-helicase/endonuclease-Cas3
MDDEFFGMIWGKSAEKAGGSMHLLLGHLLDTAAVGELVWDRFLASTIRDRLDDCSDGRGRSLFALLCGLHDVGKATPAFQMKDEGLAQRVRAAGLGWRGVTPQQGRQWHHARAGAVIVRKYLPQVGWSRPGCDWVWPLVAGHHGLIPDRGRLVHKPAVHGAGPWLDVQRAFVDRVAGDLNVDLASFSELRTPSRGGQLALSGMIIMADWVASDKEHFGGLSDLAEISMKGSRERAQRAWAQLGLRGGWRSDRPAPGNQSDLVHHRFGKPARPAQRAAVQAVREMPGPGLLILEAPMGEGKTEAALAAAEVLAGKVGADGVFVGMPTQATSDPMFSRVRGWLTAVDPEVPIGLLHGRARFNKEWAALRSQVRFVDVHDDLDEYGMADDFGTGTSGPGRRDAPLAGAAAAAEWFFGSKRGLLAAVTVGTVDHLLQAATRTKHVMLRHAGLAGRVVILDEVHAYDVYMAQFLFEALRWLADTGVPVIVLSATLPPVLRAQLAGAYLQGALQRPDVDLADLPRPTGYPSTTAVYMADGKPRFSVTSQSPWRESVPVAVEILAEPTDFAPVSIAAAVSAEVSEGGCALVVCNTVQRAQVVYAELRTTFGDDVVLLHSRFTAAERASRTEDVVDKLGPPGRENAQDRPARLVVVATQVAEQSFDVDVDILVTDLAPIDLLLQRVGRLHRHDRPTGQRPARLRDPKVIVSGLRLPDGAVPLWPAGSRAVYGDHLLLRSAALVAEAATGGGWSIPADVPGLVALGYGDEPLGPARWADAAAEARQEWEAKERRRRVNATGFLLSGEDGLGLTTLEGLHDKATAPLETEERLTAVVRDSDESVEVVLVRRGPAGYLTLAGRSLGHIGEVAVSDDAVLEEVVGATIRLPANKEITAAAHAELTPLAGWDGDSWLRRTRALILDDRMSAILGGRHLTYDNKLGLSLAPRPAADTRPAAGKG
>NC_007777.1|WP_108913673.1|18666_20655_+|glycosyltransferase-family-2-protein
MRVPGRRHYHHEHHDRAIATVQQARSRTRSTGRSCVVGLLYIAEFGRLRERLAPGACLSLLDQVAALAGDLHRWRGSAIGQGRPGEVVVVLPTRPGRSAEAAFGEIVRTVASCDFAVNGERLRVTPVPGFVQVDDTIDDATALRRARLAMGLAAGQLDMVPVCYDPKMEPAENQPRRSGRPLHTRLRPSDAVQIVVSTAICLGLPFGIYSTLFTLGLDPTHVVFALLAIALAGTTLTTYLEQLSALEPEKCPDAPAAPFPAASAIIAAYLPNESATIVDTVKAFLRLDYPGPLQIILAYNTPRYLPVEETLARIADSDPRFIPMHVPTSTSKAQNVNAAMPMITGEFVGVFDADHHPAPDAFRRAWRWLSHGAAVVQGHCVIRNGEASRISRTVAVEFESIYAVSHPGRARMHGFGIFGGSNGYWRTDLLHQTRMRGSMLTEDIDASLRTIMSGERIVADPELVSYELAPTTMSALWRQRLRWAQGWYQVSQRHLWKAVGSPDLTARQKLGLLWLLGWREIYPWLSLQMYPLIVFGLLHPQSGHGFRLNVSLYVVATLFSAMAGPIQALFAYALADPTIRRHRSWFVQFCLMNIVYSEFKNVIARLAPVKELLREREWHVTPRAVPQPDPVTPDGATAPPAGSAPPAGSAAGGVVPYPEARS
>NC_007777.1|WP_023839952.1|17126_17810_-|peptide-deformylase
MASRLTRSDEKDEKDEKIDRRVRVLGEPVDSYPQLPPEVGRGSIRRITVVGEPVLHRPCKKITEFGTAELAALIDDMFTTMYGAEGVGLAANQIDVDAAVFVYDCTDEDGVRHVGHLVNPVLEEAPPAERRLVKGDEGCLSVPGAYMEVARLEHAAVRGQDQHGAPLRLEGTGYFARCLQHETDHLYGSLYLDRLSSRGRKKALREMEERTEEIFARRVEVAARLGR
>NC_007777.1|WP_011434504.1|34524_34953_-|organic-hydroperoxide-resistance-protein
MANTIYSATSTAWGGRDGRVVSSDNRVDLQLSAPKGLGGDDGPGTNPEQLFATGYAACFHGALKAIARGKKIDIKDSAVSVTVGLIRNDNGSLGLSTRIEAQIPGIERASAQEILEAAHALCPYSVATRGNIPSEVVLVESD
>NC_007777.1|WP_023840580.1|35870_37079_-|alpha/beta-fold-hydrolase
MVLLLLGLLLGLLPLAACGKRDGNDGSSPAISAGGPDERGASLPPGTRGEILSSQVVAPAPTGIRAWRVMYRSHATSGVDIPVSGIILAPEENVPVPPGGRRIVAFGHGTTGLKDACAPSAARPALIAAASTFPLVRAGYVVALTDYPGLGSPGEHAIYVAEPEGRAVLDAARAAAALKATGAGRDVVLWGYSQGGQAVLAAGAIAAAYAPELRIRGVVATAPLADLPASLATLQHNADGVAYVLLAMIGLSVEDRTINLDRVLTPTGRRLLSIARDRCATDLIRASIGTSVSTAFTVNPLDHQPFAAGFARQREVALRKMAPTLVLQGDLDLVIRRPVTDSVVTGLCRKGTTVDYRRYPDADHGTVLGASMAELTAWVAQRFAPHPPPVTDICEMRAARFG
>NC_007777.1|WP_011434507.1|37684_38491_+|VTT-domain-containing-protein
MNAFASNTLALGPGVLSADSLAKAGLAVVLLIVFAESGLLVGFFLPGDSVLFTVGMLIARDELSTPLPVAAVLIGLAAVTGDQVGYLIGRRVGPALFRRPDSRLFKQEYVEQAHEFFEKYGPRSIILARFVPVVRTFTPVIAGVSRMNYRLFITYNIVGGVVWGCGITVLGFYLGKIDFVRNNIEPMLILIVVVSVLPIAFEFLRARRRKRAGNGAVREGSAGFGGSAPVADEAETFAVRPRRGGGRHSVAHQRQTPGLTEADREDRG
>NC_007777.1|WP_011434508.1|38910_39249_-|P-II-family-nitrogen-regulator
MRLVTAILRPHRIDDVRTALETFGIQGMTVSQVTGFGIELWRTQTYRGQTFHDESVSAVRVECVVADCDVEDVIEVIRRSGGSAASGAGKIWVLPVDAIARVRTGERGPDAL
>NC_007777.1|WP_011434509.1|39395_39938_+|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MSLLDRGTPPDPFDVLPAKPLFTVTSTDLVDGGVVPSDQVHTSAGGADISPQLAWSGQPAETRSFVVTCYDPDAPTGSGFWHWVLVDIPAAATELPRGAGSGDFTGLPAGAYHVRSDWGSKAYGGAAPPQGDVPHRYIFTVHAVDVPKLEINDEVSPAVVGFNLTFHTLARAVLRVTFQR
>NC_007777.1|WP_083503373.1|39978_41922_-|conjugal-transfer-protein-TraC
MPAGYPAGEAVAGHPERADSSPGGPDDEGPDGDFGDGDFDDSDFDDSDFDDPPSYDETGYDPDGYEAADYEATSHDPGRDAEGYVDLGGGPRRRREGRLSAEPPRRSRRAERAAAATEKAAMRRAQIALRRGAQPPRLFGPFGGRTFHKLRLPAHMETTAQIAGIYPFVVDSGLAAPGMYIGRHVWSGNSFDFDVFELYRQQVIENPNFAVFGAVGSRKSALLKTLISRGAAFGYQAAVPCDPKGEYTRLARRLGCEPTYIGPGMATRLNPLDAPPRPMGIADEDWAREVKRARSALLSSLIETAKGVPLTPAEHTAVDLALDVVTRQITGASPDRWATPILPHVLEAMTDPTEEDCVNLPMTATELRDASRDATLTLRRLTHGALGGLFDGPTTSPLDFDRPIAVLNLERVQGSDEMIALIMTCAQAWMEAALMRQDGVQRYVVYDECWRLMRFAGLVRRLSAQQKLARQWGCANAIVAHRISDLLSASPDSVEIAKGLLAETAIRILYKQASDQIADTQAALGLTDVAADLLPRLDPGYALWLIGARAFYVEHVVGDLEIPVVLNGSKMHGEVDDTNLTPDDLDPAELDPPDLGPGRLRRMADELLGDRELAGRELAGGPAVPRAADLTGGFGYPPVEPSPSSTG
>NC_007777.1|WP_011434511.1|42110_43613_-|membrane-protein
MIAERSYRFGPLERGGVMLGMRWPQLGLMIGVMLCVLGALRSPLLFIPLWVLVGVTLLFVAFVRVEDRNLDQWVPILFGFTMQKVTGETVFRGAFFRLGAGEDQLSRTVLPGPLSSLVMLSVPVGGGRYVAVVKDAKQQTYTAVLQVQGSQFALLESGDQQARVDAWGELLAGLTAGGGKLSRIQWLERTLPDSGDQLQRHWRVRGHHDDSWAADAYQQVIDAAGPVAQRHETYLSFQLRTRDARRAIQRAGGGDQAACAVLLGELRTMEAALARASINTVGWLPPRALAAVIRTTYDPYSIEMIDARGGASTDLAGGLKGLASGIDPAVAGPVRAVTAWDHYRTDSGFHTTYWINGWPRVPSPAAFLAPLLMETTCRRTVSLMVEPLPGRKAEKAVNRRRMAHLGEQQMRDKVGKVTTQRDVAEADEVERREQELIAGFGAFRFHGFVMVSADDLDGLADACGEAETLASRSRLEMVRLVGEQDQGFSVGALPLAVGVS
>NC_007777.1|WP_035957990.1|43652_45029_-|hypothetical-protein
MTVDNQLQALPFHPLGAIKDAIAGSADAYFNSTGKAFCGMAADLSSSVFSFAAQKTTINLNADYVVQNYNIAFGVAVLIVTGLFICACIMGAVRGDPHIFARALASTGTAILGSFVALTLLQMVLTASDGIADAFGDGKPLGSALVTQLRALPEQGNFALDIVLSLLVALFSFALFVVLYIRKVAIIVMAVFIPVYLAGQPTMSTSAWIKRATEILLALIFAKPVIYAIFTLGAGVASDSSGSTVDQTLTILGGAVVMIAAVFAPFVLLHLMGFADIHLMRAVGSAGRRSAASFGQGAGALLGSTSRETFRGIGARLQTRNRGMLGDAGGVGGVGSEPALPRPAGLRTGRGSGLGAPAGTSSRTGAATAAVRGSTAGRPRAGGGSTRQPARAATPTRATVTVGSNSRPVGATRTMRPGSATGGARGTGQATRRVPVPPPASRPPKMTAAVPPSRTGGT
>NC_007777.1|WP_011434513.1|45031_45817_-|hypothetical-protein
MVSLVEWAARRLIIIIVTTGTVSVIGGLVIGRYVVPDNGSNGPDTASVAPQTSPSATPPGVTPTLVPSPKPSSQPANTAATTSVPGVPTRINEFGIPVGYPHTEAGAVSACANYDRAYGNPANRTPSRVKDVFKSMALPEEADRLANTVISIDKENAKYFKLNSLQSPAVNWIGRVTGYTVRSYRNDEANITLWGLVGIGLYGNPDPRLAPHEGWGTDNCQVVWSSGDWKLKDASDGPWTPAITERAAESFRDFLLVGAGQ
>NC_007777.1|WP_011434514.1|45886_46303_-|hypothetical-protein
MILDAAAVKATVVLAEVQVKPDDSKAPGINALKDLVNGLAAYAVIAAVAAVLLGGIAWALGERMGLERASMVGKSGVIAGFGLAFLVGAAAAFVNFFLATGATATAPDPNPAGQRQPAVELTVAVDPGVVHDPSSTLF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_2

382720-382806

Orphan

Consensus_repeat	Method
CCGACGCCACCCGAGCCCTCGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007777_2

>merge|NC_007777|2|382720-382806|CRISPRCasFinder
CCGACGCCACCCGAGCCCTCGCCGCCCTCGCCGATCCCCGATCCTGTTCTGCCCGGTCCCGAGCCGACGCCACCCGAGCCCGCGCCG

>NC_007777|2|2|382720-382806|CRISPRCasFinder
CCGACGCCACCCGAGCCCTCGCCG	CCCTCGCCGATCCCCGATCCTGTTCTGCCCGGTCCCGAG
CCGACGCCACCCGAGCCCGCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_011434797.1\|388582_389458_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|225040
NC_007777.1\|WP_011434784.1\|371214_373602_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|379080
NC_007777.1\|WP_175443354.1\|381298_382549_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|226951
NC_007777.1\|WP_011434783.1\|369430_370813_-\|bifunctional-glycosyltransferase-family-2/GtrA-family-protein	unknown	unknown	gnl\|CDD\|133031
NC_007777.1\|WP_108913583.1\|383198_385262_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|379243
NC_007777.1\|WP_023840871.1\|377112_379443_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|238121
NC_007777.1\|WP_011434798.1\|389472_390369_-\|Rieske-(2Fe-2S)-protein	unknown	unknown	gnl\|CDD\|239550
NC_007777.1\|WP_167534323.1\|373643_375248_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NC_007777.1\|WP_041257733.1\|387512_388586_+\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|379721
NC_007777.1\|WP_011434800.1\|391005_391272_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011434789.1\|380495_381302_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NC_007777.1\|WP_011434801.1\|391281_391533_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_035733635.1\|376580_377000_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_139140053.1\|376204_376399_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011434788.1\|379819_380425_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_082456696.1\|385456_386185_-\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133025
NC_007777.1\|WP_173645796.1\|386623_387040_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NC_007777.1\|WP_023840873.1\|375328_376084_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_007777.1\|WP_011434799.1\|390495_390924_+\|DUF2795-domain-containing-protein	unknown	unknown	gnl\|CDD\|378655
NC_007777.1\|WP_011434791.1\|382913_383162_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011434797.1\|388582_389458_+\|metallophosphoesterase	gnl\|CDD\|225040	COG2129, COG2129, Predicted phosphoesterases, related to the Icc protein [General function prediction only].	4.22927e-18
NC_007777.1\|WP_011434784.1\|371214_373602_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	9.30475e-32
NC_007777.1\|WP_023840873.1\|375328_376084_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.6199e-92
NC_007777.1\|WP_082456696.1\|385456_386185_-\|nucleotidyltransferase-family-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.89518e-45
NC_007777.1\|WP_108913583.1\|383198_385262_-\|VWA-domain-containing-protein	gnl\|CDD\|379243	pfam13531, SBP_bac_11, Bacterial extracellular solute-binding protein. This family includes bacterial extracellular solute-binding proteins.	2.47674e-20
NC_007777.1\|WP_023840871.1\|377112_379443_-\|Hsp70-family-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	9.19581e-87
NC_007777.1\|WP_011434798.1\|389472_390369_-\|Rieske-(2Fe-2S)-protein	gnl\|CDD\|239550	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.	5.14865e-21
NC_007777.1\|WP_011434789.1\|380495_381302_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.02589e-17
NC_007777.1\|WP_173645796.1\|386623_387040_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	7.26547e-18
NC_007777.1\|WP_175443354.1\|381298_382549_-\|ATP-binding-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.43341e-15
NC_007777.1\|WP_167534323.1\|373643_375248_-\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.90147e-57
NC_007777.1\|WP_041257733.1\|387512_388586_+\|nucleotidyltransferase	gnl\|CDD\|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	3.7397e-08
NC_007777.1\|WP_011434799.1\|390495_390924_+\|DUF2795-domain-containing-protein	gnl\|CDD\|378655	pfam11387, DUF2795, Protein of unknown function (DUF2795). This family of proteins has no known function.	8.73452e-08
NC_007777.1\|WP_011434783.1\|369430_370813_-\|bifunctional-glycosyltransferase-family-2/GtrA-family-protein	gnl\|CDD\|133031	cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.	7.99922e-74

>NC_007777.1|WP_175443354.1|381298_382549_-|ATP-binding-protein
MTGLVGSAASSCDVIQRTEQRMSRMVGYTRAACATFVIIPLFGWARLRHPWIAVLIVAAAAVEASWFTWRVWRRPGRLSPRLVLADVAFCVALMLVGSRAAQPDERNKIMTELVPFSLVAPAGIGFGLGLTLLAVGAVAVLMAAWSLAVLPDVSLKLGSDLLGFALWYVVAMLIARELRALCAATAAAQDEAAAAGRLAIEQEKEAESLRQREITHREIHDYLLPVVDHVAAGGVPSPALVREARRGAQRARRIIMDPRGMDPRALAVDGTASPDSTQNGLEEMMSAVVDALADEGLALVPFVSIKGEPPAEVREALVAATREALRNVVRHSASTDEVHLFVEGDADSVLVVVRDRGVGFDPGSVRAGGGMTGSYSALRRYGGETLVTAWPGDGTKVTFRWPAAEPTGAGAPGTGR
>NC_007777.1|WP_011434789.1|380495_381302_-|response-regulator-transcription-factor
MSVDRRPVSVAIIDDHPIATESLAARFAGAGFSVLAPAPSLETFDRDTTPGIVVCDLHLPGVSGAAAVADLHRRGLRVLATSGVATPDEVLDAVAAQARGFVEKTAPAQQFVAAVTAVAGGSFHVSARLAGFLLEDAHRRPLSRGEIGPGERNLLRGLAQGDLIDELRGEWGMTAAAVHDLLDRIFDAARRRRRLHRPSPREAEVMVLVGCRGMSHREAARAMNVKASVVADYLRTAKAKYVASHPDAPATIPPSTAAALWARELGFG
>NC_007777.1|WP_011434788.1|379819_380425_-|hypothetical-protein
MGGGGGEDEGHPRSCRLWAAFRGSFLGPEALPVGMWRIRSPDVATAHPADQPIPGDGTNPEADGREIQAVHRGHAIWLGTPDADLYRLDDSRWLLRNNRRAAALTRRLVARARPVTDGTAGSAHLHLVTGDSLAGYLQIIRLGPVVARLRTIPGEGSSLPRTVAVDLGKQAAEQVAGLAAAMGDLRRAPWRPSRWITRTDR
>NC_007777.1|WP_023840871.1|377112_379443_-|Hsp70-family-protein
MGEPILAIDYGTCSASAALAVDGRIEPVKEPASGSASWPASVFVDGGSLIVGTLAERRKRIWPAAYRGEVKRDLARDSAVSLDGRSYPAHVLVTAVLSALKAEAEQQLGGAALSRAVVTIPASYDPAGPLRRTMIAAAEAAGFVDVDLLAEPVAAAWSPVVGVAPEPGSLMLVYDLGGGTFEGALVAVGEDGRHEMLSHSALHDCGGRELDQILFDEILGLYGPGLEPLLNPPGIGETFQTTANRTRHELLDFARAVKHQLSDIAVVEDVFSPAGLLVSMQRDRFAQLASPILARTMACCQHLLKSSGYGPDKLSGVLLVGGSSRIPVVTDILEGRLGVGTDWPGQQIYLPADPELAVVLGAAAWASSVSTRRTTAARPNPVLQPARWDIPGGRATMVRWLVEPGERFDASAVLARVRLTDGSLFDLAAEAPGSLIHTHAAPGTPVRDADWLATTLPSGPVPMGSAVPADLRGFERSSRPSHHVEVTARATLKGHERDVTSAAFSPDGKLLATTSKDGTRLWDVATGRTSVTLSGRKSLVVHGCAFSSDGKLLATTGSDKTARIWDVDAARQTVTLTGHRGPVYGCAFSPDGSLLATTSTDRTVRLWGSSTGKNLATLNGHRGSVYGCAFSPDGRLLVTAGAESTLLWNVTVGEIIMSLPGHTNFAGGCAFSPDGRLLATSGNEGTRLTDASSGTTVLTLPGSAQSCAFSPDGHLLATASTDDTAQLWDVATGSAIATLTGHSSTVMSCAFAPYGLLLATTSTDMTARLWDIIYTP
>NC_007777.1|WP_035733635.1|376580_377000_+|hypothetical-protein
MGTAFACSRSSSVASVPGETSRVVAAVARGAGTFPPSAGDADAIAEAVRTSSFTANVPPQNYEVTGTTLAASDPSWALTELRPTVADLDRAEGVLHHTGSGWELVQLGTYEVGCGVAPEAVLDDLGLQCPPRDGAVFPT
>NC_007777.1|WP_139140053.1|376204_376399_+|hypothetical-protein
MSIDETTGTPSNGSLSRGGGPDGLDGMDTTLDQVLHHILPRFYLGETNEGESSEGWVNLNEITM
>NC_007777.1|WP_023840873.1|375328_376084_-|response-regulator-transcription-factor
MQPVRVLVVDDETTLAELLSMALRYEGWEVRSAADGRGALRLARDFRPDAVVLDIMLPDMDGLEVLRRLRAESPDVPVLFLTARDAVEDRVAGLTAGGDDYVTKPFSLEELVARLRGLMRRAARTTEALQGARLVVGDLTMDEESREVQRAGQPVHLTATEFELLRFFMRNPRRVLSKAQILDRVWNYDFGGQANVVELYVSYLRKKIDAGRPPMIHTMRGAGYVLRPADPALAPRTSATPSSRGTSPGPA
>NC_007777.1|WP_167534323.1|373643_375248_-|HAMP-domain-containing-protein
MLLLATVSLVIVFVTAVALRGVLVDQLDRRLREASGRWDRPEPTFLQNLPSFPALPALPAPAAADSAATAAADSAATDSAATAAADQPSSLSPQQLRVRRFFRGPVDPGTLGAVVGEDGTYGAFIDTAGEGKELTTAETAVVAGIPAYLRPYTRAFGDQGDYRLLARTTHDDMIVVTGLPMKQVNATLTRMTMIAGVVALVGVAAAAIAGTAIVRVTLRPLRRVAATASRVAELPLDRGEVALSVRVPQVDTDPRTEVGQVGAALNRMLGHIGAALAARHASEMRMRQFLADVSHELRTPLAAISGYAELTRRTREHVPADVTYAMSRVESESARMTALVSDLLLLARLDSGRDLVREPVDVSRLIVNAVNDAHVAAPGHRFALDLPEEPVTVTGDPARLHQVLANLLANARTHTPPGTQVTASLTVSGPTAILAVVDDGPGIPPDLLPEVFQRFARGDSSRSRAAGSTGLGLAIVAAVVEAHHGHVRATSEPGRTAFMVELPRCLPPSETVPSEPARLTGPTHPDRASQPAHR
>NC_007777.1|WP_011434784.1|371214_373602_-|glycosyltransferase-family-39-protein
MSPILTDPVPLSGGGRAPGHRRRMPWTRDQPHHVPSPDAPTETGLPVGGSGGLVSAEDVSAEDARWVRPALVTLLVGTGVLYLWGLGASGWANAFYSAAVQAGSVSWKAFFYGSSDAANSITVDKPPASLWVMALSVRIFGLSAWSILVPQALMGVATVGLLYQTVRRQFSAGAGLLAGAVLALTPVAALMFRFNNPDALLVLLLVAAAYATLRAIEQASTRWLVFAGVLVSFAFLTKLLQALLVVPVFALVYLVTAPTSFWRRVRQTLAAGLGLLIPAGLFIAIVELVPASSRPYIGGSQHNSLLELTLGYNGLGRLTGNETGSVGGGRGGRMGGLPESIGNGAAGAAPGGGTVIFGPGGPGGHGGGMWGQAGWTRMFGSEVGGQISWLLPTALILLVAGLWITRRAPRTNRARAAFLLWGGWLLVTGIVFSQMKGIFHAYYTVALAPAVGALVGMGCALLWRHRRHPAAAVVSAATMAATAAWCYTLLNRTPQWHPWIRYAVLVAGIIAALGFLAAIRLPRRAALGVATVALVAGLLGPGSYAIATAATPHTGSIPAAGPAGAGFGGPGGGRFFRMGQGGLQAGRQRGFPPRGMGRGAQGGPQGGGIFPGGAFPGDGQQMPGGQGGMPGQAGGGAGTGTTTLGNGILGGRESRGGGPGGLLSAVTPSNTIVKLLRQNADSYTWVAAAVGSNSAAGYQLATQDPVMPVGGFNGSDPSPTLAQFKQYVAEGKIHYFIGGGGFGQANGGSSSSREISSWVTENFTSKTVDGVTLYDLTAPKTGATTGSTTGTGVTA
>NC_007777.1|WP_011434783.1|369430_370813_-|bifunctional-glycosyltransferase-family-2/GtrA-family-protein
MTGTFETTGSTGESIPVQHHQPGWLGPDGGRPRPVLDVVIPVYNEENDLAPCVRRLYAHLTGTFPYPFQITIADNASTDGTLAIAQALEKELPEVAAIHLEAKGRGRALRAAWGLSPAPVLAYMDVDLSTDLAALLPLVAPLISGHSDLAIGTRLSPASRVVRGPRREVISRCYNLILRRTLAARFSDAQCGFKAIRADAAAGLLPLVEDSGWFFDTELLVLAERAGMRIHEVPVDWIDDPDSRVDVLATAIADLKGVVRLLRAFGSGKLPLAKLHQEFGRGPLTAGHAEEGKVVEVPGVPKGLAGQLLRFAAIGVASTLSYLVLFVLLRTVTGAQIANLLSLLLTAVANTAANRRLTFGLTGPRRAGRHHLQGLVVFAVGLGLTSGSLALLHAASTNPGRGLELSVLVLANLASTVIRFLLLRAWVFRPDREARNVAGMPPATTPPRRRAPTGEIRNAE
>NC_007777.1|WP_011434791.1|382913_383162_+|hypothetical-protein
MMHRPAGIPAQELTDVDLVRELRHLHRTRHDAFIAGSEDAFETHTARMLELEREYLRRFPDAASPDPRRTRAGRRRAAGVPV
>NC_007777.1|WP_108913583.1|383198_385262_-|VWA-domain-containing-protein
MRDGLGGKRYADHRAGGGSGTDTTLARGKDVSVSDARHRSRRNRFRGGASHHGASRYGGSRAGGRGRAVTVGLGIVSGAALLVLGALTATGIGFAARAAWDAGSAGECADGGERATLTITTAPALAAPISRLAADFDRQRAGAEGSAGPCVTLAVSVVASDRVLDTLSRPESPDSPGPPDVWIPESADWLELGQESDPVTAKLPAKATTIAGSPVVIAMPRLMAQRLGWPEHHVTWAELAAAAGEADFWTHRGEPQWGDFRFAMANPEHSAAALRAVIATVGAARGLTAAEMTTGTFDQDRAAQLTVLRQERSIDWLPEYDQQLFDSVRTGGTENGAAGSAPSAFPALEADVIAYNRSLTSQNGNPPTTTLVASYPSDGMFTATVPYIVLKKTASSSSRRAAADAFAAFLRGDAGRAALSGAGFRTPTELAGHDDPGGLAGTLNATDGVRSVPPKLASTDASDSTLGTARRFFRHARQRGATLVALDSSGSMAEPVPGTDPSRTRLQAAVETSLAGLRLFAPDSQVGLWRFSGEQGAQGVQGYRDLVPMAALNAPGRGGTHRDELIAAQAGIVPGGATDLYATTLAAFRFLTQHYVPGRLNQVVILTDGRDTNRGAAAPSLDSLIEQLHAEYDPKRPVAIIMIAYSNDADLTALSRIAAATAGRSYLRPDPSQVVDIYLDALTRVRP
>NC_007777.1|WP_082456696.1|385456_386185_-|nucleotidyltransferase-family-protein
MNVAGLLLAAGAGRRMGRPKALVELGGVTLVERGVRLLTAGGCRPVVVVTGAAADEVGIVVRRLATRRVAGPAPAGWDAPEIGLEPTAGLIPEVRLVSAARWTEGVGASLRAGLAALVGTDTDAVVVTLVDQPSLGAAAVQRLISAAADPGSAHPAMTATYGGRPAHPVLLRRSVWPEVAALARGEAGARAWLRAHPGEVTGVPCDGTGSPADVNTPADLETPADLETPADLASGDTHTQPG
>NC_007777.1|WP_173645796.1|386623_387040_-|MarR-family-transcriptional-regulator
MSSHPGQLARRLQQVTYQLWTTTVSTETTPPQFVVLNSLLADPDIDQRTLGERASLDRSTVADVVARLVQRGLIRRVRDPRDGRRNVLRLTKRGESTHGQVADRIDQMNDKLLAPLSEEEQTALLSMLARIVDQDRPH
>NC_007777.1|WP_041257733.1|387512_388586_+|nucleotidyltransferase
MEDAPRGLRESLKRVAVTLKEAGIPFALGGSYACWARGGPEPVHDVDFMLREDDVPRAVEVLANAGLRPVDSPEDWLTKVFDGEVLVDLIHHPVGRAVTQQTLERSSEMSVDSVRMPVLDATDWFEMTLLALEERYCDLARVIPMIRAMREQVDWDQVRRATATSPFAEAALLVATRLNLIPAAGRAVSAEGAPSTEGAPSAGGTPTGSRPHGPLVPAGGAVPAGGAVPAGGAVPAGGAVPAGGAVPAGAAEQAGTAKRIADTAGYGALNLTEADEYLAGDLHERLAEDPRVAELGLEVVVDGQQILVEGEVATDARRRAVADVLAEALPGRLVSNEVTIADRGMPTEAPPNVETIS
>NC_007777.1|WP_011434797.1|388582_389458_+|metallophosphoesterase
MIRIAAVGDIHLGVDSRGTFAPLLRGLAGRADVLLLAGDLTQRGLPAEAEIVAAEVADAEVPVVAVLGNHDYHGGAENEIIEMLADAGVTVLEGGGTVLDIDGRRLGIAGVKGFGGGFAGASGSDFGEPLMKAFIRHTKDAGSRLRGALESLDCEIRVALMHYAPVPDTLIGERTEIFPFLGSYHLAEAVDAGAACLALHGHAHAGSEHGMTAGGVPVRNVARPVIRKAYALYGVGEMATTGRPGSDRAGLQRSAGAASPAVVPPAVPPTGPAAGTPRSAADSPSTLSRPS
>NC_007777.1|WP_011434798.1|389472_390369_-|Rieske-(2Fe-2S)-protein
MVRIPHNVLVRPAERLERAEALDPVAVKIRDMVRRSLHDGTIRDTLHGVPLGHPLHPALAALPIGTWISAGIVDLLAGRHEGSERAARVLIATGLLAAVSAAASGLADYSELHERQLRVGVAHAATNSLAACCYAASLGIRWRGNGRLGRRLALLGLATASTSAYLGGHLAYRQASGANHTEEVPHLLPPGWHPLALLDELADGRPEARLLRDVPVVLLRKGDHVDVLAGRCSHLSGPLHKGEIIRRDGFTCLRCPWHGSTFRVTDGAVVHGPATAPQPRFDVWISDGEVRVRLPGAG
>NC_007777.1|WP_011434799.1|390495_390924_+|DUF2795-domain-containing-protein
MAVDRGSTKHGPVRDDILAHEVEGLVRAGRDTRAEEWRSAEPFPEEATGGPQNLDAAGSRVGVPAGMTPVDVEERSELARWLGRAVFPANRDEIMDHLRHQHAPDRVVDEVAGAPPDIQFTSLGALWRVLRPGPPHVESRRH
>NC_007777.1|WP_011434800.1|391005_391272_+|hypothetical-protein
MGGGLAASVLLLVGFAMIGAFNVFAFGALAGLWALGIAWIMVLGPRAIDRRVVRARLREALRGVRRRRRWPGALFPWARDCVTRRWPG
>NC_007777.1|WP_011434801.1|391281_391533_+|hypothetical-protein
MGTSGFGYGDQRPGSGDLLQTLVAGLDQTEREDTLRLLRRRLVEDRAAACGGQRDRQVDVGPRTRAARGPTKSQAAGIHRHRG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_3

702503-702636

Orphan

Consensus_repeat	Method
ACGGCGCCTTCGGCGCAGTGTGGGGGCCCCTGGCATCGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007777_3

>merge|NC_007777|3|702503-702636|CRISPRCasFinder
ACGGCGCCTTCGGCGCAGTGTGGGGGCCCCTGGCATCGGGCGCCGTTCGGGGTTTCTGTCAGCTCGCCTTCGGCGAGCTTCCTGGGGTAGTCGACGGCGCCTTCGGCGCAGTGTGGGGCCCCTGGCATCGGGCT

>NC_007777|3|3|702503-702636|CRISPRCasFinder
ACGGCGCCTTCGGCGCAGTGTGGGGGCCCCTGGCATCGGGC	GCCGTTCGGGGTTTCTGTCAGCTCGCCTTCGGCGAGCTTCCTGGGGTAGTCG
ACGGCGCCTTCGGCGCAGTGTGGGGCCCCTGGCATCGGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_011435071.1\|702672_703233_-\|SWIM-type-zinc-finger-containing-protein	unknown	unknown	gnl\|CDD\|227059
NC_007777.1\|WP_011435077.1\|708437_709700_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NC_007777.1\|WP_011435063.1\|693355_694405_+\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
NC_007777.1\|WP_011435062.1\|692550_693180_+\|30S-ribosomal-protein-S4	unknown	unknown	gnl\|CDD\|235411
NC_007777.1\|WP_011435069.1\|699046_700414_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237672
NC_007777.1\|WP_035940875.1\|695366_696197_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NC_007777.1\|WP_076804041.1\|711161_711602_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|376771
NC_007777.1\|WP_011435074.1\|704903_706508_+\|NAD(P)H-hydrate-dehydratase	unknown	unknown	gnl\|CDD\|238576
NC_007777.1\|WP_082456576.1\|703390_704287_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NC_007777.1\|WP_011435067.1\|697992_698436_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NC_007777.1\|WP_011435064.1\|694537_695158_+\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
NC_007777.1\|WP_011435061.1\|692050_692455_+\|30S-ribosomal-protein-S11	unknown	unknown	gnl\|CDD\|180007
NC_007777.1\|WP_035729597.1\|711705_712479_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
NC_007777.1\|WP_011435078.1\|709860_711132_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NC_007777.1\|WP_011435075.1\|706512_707667_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143481
NC_007777.1\|WP_049760825.1\|696237_697707_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223039
NC_007777.1\|WP_011435070.1\|700551_702474_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NC_007777.1\|WP_011435076.1\|707721_708045_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011435073.1\|704465_704822_+\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|234610
NC_007777.1\|WP_011435068.1\|698529_698937_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011435071.1\|702672_703233_-\|SWIM-type-zinc-finger-containing-protein	gnl\|CDD\|227059	COG4715, COG4715, Uncharacterized conserved protein [Function unknown].	0.000314824
NC_007777.1\|WP_011435077.1\|708437_709700_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NC_007777.1\|WP_011435063.1\|693355_694405_+\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	0
NC_007777.1\|WP_011435062.1\|692550_693180_+\|30S-ribosomal-protein-S4	gnl\|CDD\|235411	PRK05327, rpsD, 30S ribosomal protein S4; Validated.	4.57129e-110
NC_007777.1\|WP_011435069.1\|699046_700414_+\|phosphoglucosamine-mutase	gnl\|CDD\|237672	PRK14318, glmM, phosphoglucosamine mutase; Provisional.	0
NC_007777.1\|WP_035940875.1\|695366_696197_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	1.73016e-109
NC_007777.1\|WP_076804041.1\|711161_711602_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	2.61589e-48
NC_007777.1\|WP_011435074.1\|704903_706508_+\|NAD(P)H-hydrate-dehydratase	gnl\|CDD\|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	1.68755e-60
NC_007777.1\|WP_082456576.1\|703390_704287_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	1.97073e-21
NC_007777.1\|WP_011435067.1\|697992_698436_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.27318e-96
NC_007777.1\|WP_011435064.1\|694537_695158_+\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	1.04843e-62
NC_007777.1\|WP_011435061.1\|692050_692455_+\|30S-ribosomal-protein-S11	gnl\|CDD\|180007	PRK05309, PRK05309, 30S ribosomal protein S11; Validated.	6.02927e-88
NC_007777.1\|WP_035729597.1\|711705_712479_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	1.91074e-47
NC_007777.1\|WP_011435078.1\|709860_711132_+\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	9.54835e-27
NC_007777.1\|WP_011435075.1\|706512_707667_+\|alanine-racemase	gnl\|CDD\|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	8.27363e-152
NC_007777.1\|WP_049760825.1\|696237_697707_-\|hypothetical-protein	gnl\|CDD\|223039	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional.	1.38566e-05
NC_007777.1\|WP_011435070.1\|700551_702474_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NC_007777.1\|WP_011435073.1\|704465_704822_+\|holo-ACP-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	1.88218e-41
NC_007777.1\|WP_011435068.1\|698529_698937_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	9.83281e-74

>NC_007777.1|WP_011435070.1|700551_702474_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIIGYVGDQAALDVALNGLRRLEYRGYDSSGVAVVGAGALRTARRAGKLSNLEKLLAENPDSRPMPGTTGMGHTRWATHGGPTDANAHPHTDCTGAIAVIHNGIIENFAALRVELETVGHELASETDTEVVAHLLEVELAGTGTGTGTGAGAGAGADRGYDGGAHPLTVALRRVCRRLEGAFTLVVLHRDFPEVVVGARRNSPLVVGLGQGETFLASDVSAFIAHTREALEIGQDQVVEARRDGATVTDFGGQIIEGRRYHVDWDASAAEKGGYPYFMLKEISEQPTALADTLRGRLSADGAIVLDEERLSGQDFRDVDKVFIVACGTAYHAGLIAKYAIEHWTRLPCEVEMASEFRYRDPVLDRSTLVIAISQSGETLDTLMAVKHAREQKARVLAICNTNGSTIPRESDAVLYTRCGPEVGVASTKTFLGQVAACLLVGLFLAQVRGVLYGDEVAAYVERLQRMPELIERTLGTVEPVRELARALADAKAVLFLGRHVGYPVALEGALKLKELAYMHAEGFPAGELKHGPIALIEPGLPVFVVVPSPRGRANLHGKIVSNIQEVRARGARTIVIAEESDTAVEPFADHLIRVPATASLFAPLVTTLPLQVFACELALARGLDVDQPRNLAKSVTVE
>NC_007777.1|WP_011435069.1|699046_700414_+|phosphoglucosamine-mutase
MVRLFGTDGVRGVANIDLTAEQALSLASAAVEVLAGPNRTSGPSGRGKPVVVVGRDTRPSGEFLEAAVVAGLAASGADVARIGVAPTPAVAHAVAASGAMFGVMLSASHNPMPDNGIKLFAAGGLKLPDEVEDAIERRMALPPSRRPVGADVGRVRDEPVLLDRYAAHLLATLPVPLDGLRVVVDCAQGAASTLAPRVLRAAGADVVALHADGDGIAINDGSGATHLDSLRAAVVAHGADVGIAHDGDADRCLAVDATGEVVDGDQILAMCALALAERGELVDDTVVVTVMSNLGFHHAMREAGITVVTTPVGDRYVLETMRAGGYVLGGEQSGHVVFLDHATTGDGLLTALRILGRVAETGQPLGELTKAMTRLPQVLVNVRGVDRTQVDTNEELLRAVALAKAELGDEGRVLLRSSGTEPLVRVMVEAGTDAAARAVAQRLAAVVRTALPPAR
>NC_007777.1|WP_011435068.1|698529_698937_+|30S-ribosomal-protein-S9
MAVVTDVQGNPRATGRRKEAVVRVRLLPGTGQWTLNGRTLEQYFPNKVHQQLVNEPLKALDRMESYDIVARLHGGGVSGQAGALRLALARALTLAEEESRPTLKKAGFLTRDARVKERKKYGLKKARKAPQYSKR
>NC_007777.1|WP_011435067.1|697992_698436_+|50S-ribosomal-protein-L13
MRTYQPKPADVQRVWHVIDATDVVLGRLATQAATLLRGKHKPYFAPHIDTGDFVVVINAGKVALSGNKREQAQYHRHSGFPGGLRSTSYGELLDTRPQIIVEKAIKGMLPKNKLGRAQGTKLKVYAGPTHPHQAQQPTPFEIIQVAQ
>NC_007777.1|WP_049760825.1|696237_697707_-|hypothetical-protein
MTEMGSGRSDGREGPGAPGHEGPTPLSGGACHDRASPAPAEGRRSAGASKGASEGGGPACRGGTTGPTAATIPRPGGAHPDLDGWTPPADDPLFGGSRTYSFSPKPTSLRITPPDTTPPDVTPSPTTTSLSTGPAGTGAASVPPSGPTRYERPASRPRDSDTPAYPGVSPRPGVFPDTDAVTGGPTLIGETGESHPPPAADSGFGDGDPVDGDPINGSAPSATAASSARGAYPPRWGRSTQDQAGDRGVRSARRLLAGVAGAVLVLIAAVAVVAVRSGDNGRSGDNGNKTPTTRQTLPPIPAGFLDSATLDSDPVTANEFFSDEQVEAEGRNYRRLARKLDNSCPDLTGDLVTQLKDRRCRQVVRTLFLSTPRDGERQVLAGVTVFVLDKLATATATADILNQGRGGIVPLPVPANSIPNARITGPGGNNSWRGAITRGHYLIYTQVAYTDGTQGAGIDPALRNAQTDLSTLATEPIGDRAVLGHGPRH
>NC_007777.1|WP_035940875.1|695366_696197_+|tRNA-pseudouridine(38-40)-synthase-TruA
MMMTDGLVRLRLDLSYDGTPFAGWARQPGQRTVQGDVEDALMRVARLPAVRLTVAGRTDSGVHAVGQVAHVDLPDDVPLGGLARRLNGVLDRAVRIIGLAPAPPGFDARFSALSRRYVYRITDAPYGAEPLRRFDTLAWPRPLDVPAMAAAALFLVGEHDFAAFCRRREGATTVRTLLRLDVLRRPEGVVVADVEADAFCHSMVRALVGALLAVGEGRKPPQWPAAVLHRGVRDPAVTVAPAHGLTLVDVRYPPDPELAARAEVTRAVRIPPTPSG
>NC_007777.1|WP_011435064.1|694537_695158_+|50S-ribosomal-protein-L17
MPTPTKGARLGGSPAHERLLLANLATALFEHGGITTTEAKAKRLRPYAERLVTFAKRGDLHARRRVMRQVRDNSVVHTLFTEIGPRYANRNGGYTRIVKIGNRKGDNAPLARIELVEALTVGQQAVSEAERARGTRFEARRKPTGATVEAAEELAQESPTAAAVAVEAAEPAETPAEGAAGKPTTAQTDDSGIGDDSGAGEQNSAN
>NC_007777.1|WP_011435063.1|693355_694405_+|DNA-directed-RNA-polymerase-subunit-alpha
MLIAQRPTLIEDPISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRIDGVLHEFSTVPGVKEDVTDLILNLKELVVSSDNDEPTVMYLRKQGPGEVTAADIAPPAGVEVHNPELRLATLNDKGKLEIELTVERGRGYVSAAQNKQAGQEIGRIPIDSIYSPVLKVTYKVEATRVEQRTDFDRLIVDVETKPSISPRDAMASAGKTLVGLFGLAQELNAEAEGVDIGPSAADAALAADLALPIEEMDLTVRSYNCLKREGIHTIGELVSRSEADLLDIRNFGQKSIDEVKTKLGAMGLQLKDSPPGFDPRQAVDTYGTDAYSPSFSDPSDDGAEFIETEQY
>NC_007777.1|WP_011435062.1|692550_693180_+|30S-ribosomal-protein-S4
MARYTGADCKRCRREKTKLFLKGSKCDTPKCPIEIRPYPPGEHGRGRTKDSEYLLQKREKQKCARIYGVLEKQFRGYYDEANRRAGKTGDELLKILESRLDNVVYRGGFAPSRDAARQAVRHGHVQVNGRKVDIPSYRISENDIVEIAPKARELTPFIVARETAGQGRAVPAWLEVIPSQLRILVHSLPARQVIDTQVQEQLIVELYSK
>NC_007777.1|WP_011435061.1|692050_692455_+|30S-ribosomal-protein-S11
MPPKTRAAGAKKVRRKEKKNVAHGHAHIKSTFNNTIVSITDPSGNVISWASAGHVGFKGSRKSTPFAAQMAAENAARKAQEHGMRKVDVFVKGPGSGRETAIRSLQAAGLEVGAIQDVTPTPHNGCRPPKRRRV
>NC_007777.1|WP_011435071.1|702672_703233_-|SWIM-type-zinc-finger-containing-protein
MIISGSGENGHGGDAVTPLEAAFEERACAQHAGTDVFMEGVNLALLGRVEQLRIRPTNASGTVDDDGSYEVRLEAADDGPRTGCTCTEGSTGSFCRHAVAVALVATGSAGLAEDDEGEDGTILGEETLFTDDPVHAAMRVFLSRAPRAELVETLLDAADDNDAVADALWEATVAWHGRQHGATPST
>NC_007777.1|WP_082456576.1|703390_704287_+|helix-turn-helix-transcriptional-regulator
MPGPWGHWGCEAGFGPSRLRDFFEAMSAWGQCGGRSEAVAGEQDHPESGRAGRVGRGGHGGHREHGGHREHGGHREHGGHAGGGPRGRRGGPGWPFGGFPGPGFGPGFGGPGFGGPGSFGGRGPKVGRGDVREALLALLAEEPMHGYQMIRELAERSGGIWRPSPGSVYPVLSLLADEGLVRAEEAEGKRVFHLTDAGRAHVEARAGERKPWETAAAAVDDDLTSLRTLAFAVGAAIVQVAQAGDEAQIAAARSLLAETRRGLYRILAGDDVEPPMRPEGAATGTGADKGRTAPDGDS
>NC_007777.1|WP_011435073.1|704465_704822_+|holo-ACP-synthase
MAVVGVGVDVVDVDRFAATLARTPGIAMRLFTATERGLARPERLAARFAAKEAVAKVLGAPPGLEWHDTEVVLGTGGRPSLRIIGTVAAAAARLGIASWHLSLTHDGGVAVAMVVAET
>NC_007777.1|WP_011435074.1|704903_706508_+|NAD(P)H-hydrate-dehydratase
MRNAHTVEQVRGAEAPLLASLPPGALMQRAVHGLVAHAARRLGRVYGARVVVLAGGGDNGGDALWAGARLAARGARIDAVAPGRTHPEGTAALLAAGGRLHHPGPVVGAGGPAGAGQPIDDERLRILFAAADLVLDGLLGIGGRGGLREPYARLAVLAPPERTVAVDVPSGVDADTGAVAGPAVRASSTVTFGTRKRGLWLMPGAAHTGPVELVDIGLDLPEPDLCALDDADVAAALPVPSPTASKYSRGVLGLVAGSDAYPGAAVLAVGGALRGGAGYLRVVTAGHAEKVAGEAVGAVVSRAGDFVRMAHPEAVVTVIEAGDADTMLAAGRVQAWAIGPGLAPGPAVRTLLTALLATDLPVLVDAGGLDPLAEIIAARPAVAERAAPVLITPHEGEFQRFVSVALGRDAQATVAELADDRLAVLRRAAAATGAVILLKGARTLVVRPDGSALVNTTGSAWLGTAGTGDVLTGLIGSLLAAGLAPATAGAVGAYLHGRAAERAPAPLAANDLPALLPQVIGDLLDRRRMPRGVA
>NC_007777.1|WP_011435075.1|706512_707667_+|alanine-racemase
MTEQRAGSPAGNDLRSCAVIDLDAVRTSVTALVARAGDAATMAVVKADGYGHGMIPCARAALEGGATWLGTAFLEEALALRAAGFTVPVLSWLAAPGESFAAAIAADVDLSASAGWALEEAAAAARRTGRTARVHLKADTGLGRAGATEADWPALCDAGAALEAEGVIEVIGVWSHFAFADAPGHPTVQGQIGRFRDAIDIATKAGLHPSVRHLANSAATLVSPEAHFDLVRPGVSVYGLSPGPEIGPPAAFGLRPAMTLTTHAALTKRVPAGTGVSYAHRYTTTRETTLAVVPLGYADGIPRSATNTAEVLFGGRRRRIAGTVCMDQFVLDVGDDQVAAGDEVLLFGPGDRGEPTADDWAAALGTINYEIVSRVGARVPRRYV
>NC_007777.1|WP_011435076.1|707721_708045_-|hypothetical-protein
MRLRWHRSKDIPASAGRRLTGPERAAALGVPDDTEPAEGPGAAAPAPVPAGPVMLTLTTRSRLEEAEREAAVSRPVRRRMERGSLGGHVSPTGGHGSGGACGPGGCG
>NC_007777.1|WP_011435077.1|708437_709700_+|serine-hydroxymethyltransferase
MHQPPIPHLAVADPELAGLVEAEATRQFSSIRLIASENYVSTAVLEASGSVLTNKYSEGYVGRRYYEGQQVIDPIETLAVDRAKALFGVEHANVQPYSGSPANLAVYLAFAEPGDTVMGLSLPMGGHLTHGWSVSATGTWFRSVRYGVRADTGRIDLDEVRDLALAERPRIIFCGGTAIPRTIDFPGFAAIAREVGAVLVADIAHIAGLIAGGAHPSPVGHAPVISTTTHKTLRGPRGAMLLSDAEHATAIDKAVFPGLQGGPHNHTTAAIAVALREAAAPAFRDYAHAVVANARALAEALVERGFDLVTGGTDNHLILIDLTSRDIGGKPAARALDQAGIELNYNAVPFDQRRPFDPSGIRLGTAAITTRGLGVGHMPVLAGWIDDVVKAAVVGDTATITRVREQVTELTAAFPMPGFA
>NC_007777.1|WP_011435078.1|709860_711132_+|alpha/beta-hydrolase
MAKTVGAIAGSRTARATGSLGVVGAAAVAAGLVAERRMIRRRRETADLASDARMGPIGGWVTTVIAGDGVPLYIEETGPSDAPVTLVFVHGFCVTADSWILQQRALTDLGRMVFYDQRAHGRSGPSEVKNCTIDALADDLFRVITERVPRGPIILVGHSMGGMTVLGLADTHPELFDDRIVGVALLATSAGELARLTFGLPASVTGVVRRVLPGFAVGMRHAPSLLERARRRGSDLSWELTRRIGFGSTELPPSVVSFLETMVADTPIPVIAAFLPTLLDHDRLAAAERLAEIPTVLIVGDVDLMTPLAHSRTLAEALPRAELIVEEGAGHAIMLERPDVVNAAIREIARQATAPRAMPRPRSGSAQTGRSAPAQTGRSAPAQTGRSGRTGRSGSGRTGRSARSETFSVSPRGPRSEATTEGA
>NC_007777.1|WP_076804041.1|711161_711602_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MREFGAWLATLLRPGDLLVLSGPLGAGKTVLAQGIAAGLGVRETVTSPTFVLARIYPDGRIPLVHVDAYRLGGVVEVDDLDLDADVDTSVTVVEWGAGLAERLTQDHLEIVISRPRADEVGETRIVRLVPSGASWIERLRARAPVS
>NC_007777.1|WP_035729597.1|711705_712479_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MLVMALDTSTAACSVALAELTSSDPARPVSGTGGERAAPGVHVWPRAVMVTVDARRHGELLAPSMRAVLAEGGARPTDLDAVVVGAGPGPFTSLRVGMVTAAAFADALGVPVHGVCSLDAIGAATGGSVAVVTDARRREVFWACYRDGVRVGDPAVGRPADVVRFLRGLGVDRVVGPGTVLYPEIFAELAGTTAGATAGEVPAPGAGQPDDGYPRPELLVGLAGADVLAGRAPQPLVPLYLRRPDAAEPHTPKPVTV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_4

1713659-1713766

Orphan

Consensus_repeat	Method
CCTGCGCCGGCAGCTCGACGAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007777_4

>merge|NC_007777|4|1713659-1713766|CRISPRCasFinder
CCTGCGCCGGCAGCTCGACGAGGCCCGGCGTTCCGGCGGTGGTGGTCCGGGCGTGCCCGCGCAGATCCTCGAGGAGAACCAGGGCCTGCGCCGCCAGCTCGACGAGGC

>NC_007777|4|4|1713659-1713766|CRISPRCasFinder
CCTGCGCCGGCAGCTCGACGAGGC	CCGGCGTTCCGGCGGTGGTGGTCCGGGCGTGCCCGCGCAGATCCTCGAGGAGAACCAGGG
CCTGCGCCGCCAGCTCGACGAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_011435861.1\|1710821_1711505_+\|peptidoglycan-editing-factor-PgeF	unknown	unknown	gnl\|CDD\|376831
NC_007777.1\|WP_011435874.1\|1724872_1725547_-\|LON-peptidase-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366967
NC_007777.1\|WP_023840530.1\|1725821_1726202_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011435871.1\|1722015_1722978_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NC_007777.1\|WP_076804224.1\|1722991_1723885_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NC_007777.1\|WP_148214906.1\|1711519_1712542_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143483
NC_007777.1\|WP_011435866.1\|1714743_1717953_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235681
NC_007777.1\|WP_035730579.1\|1713169_1713424_+\|YggT-family-protein	unknown	unknown	gnl\|CDD\|376765
NC_007777.1\|WP_011435873.1\|1724067_1724811_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011435855.1\|1702378_1703794_+\|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	unknown	unknown	gnl\|CDD\|179297
NC_007777.1\|WP_011435869.1\|1720048_1721131_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NC_007777.1\|WP_035730575.1\|1721321_1721966_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011435867.1\|1718524_1719130_+\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|237810
NC_007777.1\|WP_023840535.1\|1712552_1713095_+\|cell-division-protein-SepF	unknown	unknown	gnl\|CDD\|377370
NC_007777.1\|WP_011435856.1\|1703796_1705389_+\|putative-lipid-II-flippase-FtsW	unknown	unknown	gnl\|CDD\|274232
NC_007777.1\|WP_011435859.1\|1707363_1708872_-\|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl\|CDD\|234757
NC_007777.1\|WP_011435857.1\|1705392_1706523_+\|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase	unknown	unknown	gnl\|CDD\|234825
NC_007777.1\|WP_011435860.1\|1709307_1710798_+\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236468
NC_007777.1\|WP_011435868.1\|1719110_1720052_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|161659
NC_007777.1\|WP_011435858.1\|1706580_1707030_-\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|281995

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011435861.1\|1710821_1711505_+\|peptidoglycan-editing-factor-PgeF	gnl\|CDD\|376831	pfam02578, Cu-oxidase_4, Multi-copper polyphenol oxidoreductase laccase. Laccases are multi-copper oxidoreductases able to oxidize a wide variety of phenolic and non-phenolic compounds and are widely distributed among both prokaryotes and eukaryotes. There are two main active catalytic sites with conserved histidines that are capable of binding four copper atoms.	2.11888e-77
NC_007777.1\|WP_011435874.1\|1724872_1725547_-\|LON-peptidase-substrate-binding-domain-containing-protein	gnl\|CDD\|366967	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain. This domain has been shown to be part of the PUA superfamily. This domain represents a general protein and polypeptide interaction domain for the ATP-dependent serine peptidase, LON, Peptidase_S16, pfam05362. ATP-dependent Lon proteases are conserved in all living organisms and catalyze rapid turnover of short-lived regulatory proteins and many damaged or denatured proteins.	4.61442e-35
NC_007777.1\|WP_011435871.1\|1722015_1722978_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.14488e-73
NC_007777.1\|WP_076804224.1\|1722991_1723885_+\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	7.94437e-10
NC_007777.1\|WP_148214906.1\|1711519_1712542_+\|alanine-racemase	gnl\|CDD\|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	4.83243e-73
NC_007777.1\|WP_011435866.1\|1714743_1717953_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NC_007777.1\|WP_035730579.1\|1713169_1713424_+\|YggT-family-protein	gnl\|CDD\|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	0.00248017
NC_007777.1\|WP_011435855.1\|1702378_1703794_+\|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	gnl\|CDD\|179297	PRK01438, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.	0
NC_007777.1\|WP_011435869.1\|1720048_1721131_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	9.23639e-05
NC_007777.1\|WP_011435867.1\|1718524_1719130_+\|signal-peptidase-II	gnl\|CDD\|237810	PRK14764, PRK14764, lipoprotein signal peptidase; Provisional.	1.00125e-88
NC_007777.1\|WP_023840535.1\|1712552_1713095_+\|cell-division-protein-SepF	gnl\|CDD\|377370	pfam04472, SepF, Cell division protein SepF. SepF accumulates at the cell division site in an FtsZ-dependent manner and is required for proper septum formation. Mutants are viable but the formation of the septum is much slower and occurs with a very abnormal morphology. This family also includes archaeal related proteins of unknown function.	1.4255e-30
NC_007777.1\|WP_011435856.1\|1703796_1705389_+\|putative-lipid-II-flippase-FtsW	gnl\|CDD\|274232	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW. This family consists of FtsW, an integral membrane protein with ten transmembrane segments. In general, it is one of two paralogs involved in peptidoglycan biosynthesis, the other being RodA, and is essential for cell division. All members of the seed alignment for this model are encoded in operons for the biosynthesis of UDP-N-acetylmuramoyl-pentapeptide, a precursor of murein (peptidoglycan). The FtsW designation is not used in endospore-forming bacterial (e.g. Bacillus subtilis), where the member of this family is designated SpoVE and three or more RodA/FtsW/SpoVE family paralogs are present. SpoVE acts in spore cortex formation and is dispensible for growth. Biological rolls for FtsW in cell division include recruitment of penicillin-binding protein 3 to the division site. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	1.38831e-140
NC_007777.1\|WP_011435859.1\|1707363_1708872_-\|UDP-N-acetylmuramate--L-alanine-ligase	gnl\|CDD\|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	1.6033e-173
NC_007777.1\|WP_011435857.1\|1705392_1706523_+\|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase	gnl\|CDD\|234825	PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional.	4.59597e-134
NC_007777.1\|WP_011435860.1\|1709307_1710798_+\|cell-division-protein-FtsZ	gnl\|CDD\|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NC_007777.1\|WP_011435868.1\|1719110_1720052_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|161659	TIGR00005, Ribosomal_large_subunit_pseudouridine_synthase_D, pseudouridine synthase, RluA family. In E. coli, RluD (SfhB) modifies uridine to pseudouridine at 23S RNA U1911, 1915, and 1917, RluC modifies 955, 2504 and 2580, and RluA modifies U746 and tRNA U32. An additional homolog from E. coli outside this family, TruC (SP\|Q46918), modifies uracil-65 in transfer RNAs to pseudouridine. [Protein synthesis, tRNA and rRNA base modification].	1.5967e-101
NC_007777.1\|WP_011435858.1\|1706580_1707030_-\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|281995	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase. This family of proteins is found in the genera Mycobacterium and Streptomyces. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. Rv1558 is an F420H(2)-dependent quinone reductase involved in oxidative stress protection.	3.20769e-32

>NC_007777.1|WP_035730579.1|1713169_1713424_+|YggT-family-protein
MLTVYLLLLIARWIIDLVLALSRSFRPTGPLVLVFEIVYTVTDPPLRFIRRFLPPLRVGSVALDLGFLLLFLVVIVLRSYAQRL
>NC_007777.1|WP_023840535.1|1712552_1713095_+|cell-division-protein-SepF
MGLGRRAMVYLGLAEEDEDYLDDDYDDGRAVGRDDRRAMHEPVPMDRTVRRIDAREEPVAMPRRPPVEPLRPAGPVPMRRVAAVEESHPYRITTLQPRSYNEARQIGEEFRDGTPVIMNLTDMDDADAKRLVDFAAGLIFGLRGDLEKVTNKVFLLSPHNVEVTETDKRRIREGGFYNQS
>NC_007777.1|WP_148214906.1|1711519_1712542_+|alanine-racemase
MPARHGASGSGESDGPFDPDRPAPDRPAPDRPAPDRPAPDRPAPDRPAPDRPAPDRPAPDRPAPDRPAPIELDPARLDRLTQRLAEVRARIAGAARAAGRDPDHLTLIAVSKTYPPQDVVMMHTLGVRHFAENREQEAGPKVSLVTRLIGGERSVPAKGTGDGLSSGATGSDDPIWHFVGQLQRNKARSVLRWADWVQSVDRVSLVPVLSRLAMERGRPLSICLQVSLDLPGASDGKIGASIAGSRRGGIDPAGLSALADLVEEAPGLALRGVMAVAPRRGQPRPAFARLREVAERLKVGHPQATVISAGMSGDLEDAVAEGATHLRIGTALFGERPGVP
>NC_007777.1|WP_011435861.1|1710821_1711505_+|peptidoglycan-editing-factor-PgeF
MPVLVTSRSGGVSDPPFEGLNLGDHVGDADEAVAVNRRRLVDRLRMPVQYMRQVHGRQVAVLRRHGPPPQADALVTDVPGLVLAVMVADCAPVLFEAPAVVGVAHAGRVGMASGVIHATLGALERLGAARDELRVTIGPCICAGCYEVPEDLRCEVDTQVPGSAATTRVGTAAIDLRAGIRRQLAAAGVTDITISARCTAEDPELYSYRREGRTGRFAGLAWLGPTP
>NC_007777.1|WP_011435860.1|1709307_1710798_+|cell-division-protein-FtsZ
MAAPQNYLAVIKVVGIGGGGVNAVNRMIEVGLKGVEFIAINTDAQALLMSDADVKLDVGRELTRGLGAGADPEVGRQAAEDHREEIEEVLKGADMVFVTAGEGGGTGTGGAPVVANVARSLGALTIGVVTRPFTFEGRRRATQADTGIDTLRNEVDTLIVIPNDRLLAMTDRDISVLDAFRSADQVLLSGVQGITDLITTPGLINLDFADVKTVMSHAGSALMGIGRARGDDRATVAAEQAIASPLLEASMDGAQGVLLNISGGSDLGLFEINAAAELVADAAHPEANIIFGAVIDDALGDEVRVTVIAAGFDTVQDRRTRTLNAAGQRRPPGPAGGSAAGPPTVAAPATSPATTILPPLPTISTVPSRTPPAAPATPAAPPPVAPVPPPTPSYLQAPPPPIAPSNVGHYHPEPLPGAPASNEPAAAATAESTVIPTIESRLAPPNREPVEPPVDQAYGQHRPEPPRTAPRPTYPPRRPVRPVADDDELDVPDFLK
>NC_007777.1|WP_011435859.1|1707363_1708872_-|UDP-N-acetylmuramate--L-alanine-ligase
MTGQRTQHVHFLGIGGSGLSPLAQIHLAGGGTVSGSDSEDSPRVATLRARGVPIRIGATPGPAAFAAELAGADVVVASSALPDDHPEIVAARALGLPVRRRSEWLPELTAGYRLVAVAGSHGKSTTSAMLTLVLRAAGLDPTAVIGAEVSQLGGNALAGSGDVFVLESDEYGGAFAGLDPSIAVITNVEWEHPDVFPDEASVRTAFAAFARRVRPGGRLVVCGDHPGVVAVLTELGRQRPGNDVAVNDVAVIDYGFGAERHWRAVDVVTTAGDDMTRATVLRAGQEIGALTLTVPGRHSVLNALAVLATATELGVAPAQTLTTLTTFTGAARRFEFVGFWNGPADSTGVGPAGGPGSLEVIDDYAHHPTEVRLTLAAARSRARGRQIWTVLQPHTFSRFAALLDDFAAAFSDADRVYVTDIYAARETDDLGLHAVDLVKRVSEPAATYYVSWPELVERLATDVRVTLSDEASRGILLLTLGAGTITTVGPRLLAALGFSAAG
>NC_007777.1|WP_011435858.1|1706580_1707030_-|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MADTQDPRRPGFDVRAVNQTVIAEYRATGGVLEKTLPGSRLVLVTTTGRRSGKEHTTPLGYVMDGGPGRIVVFASNMAAPRHPDWYQNLTAEPKVVVELGTDRFEAEALTATGDERQRLYEALVETMPGIRGHQEQVEREIPVVVLVTL
>NC_007777.1|WP_011435857.1|1705392_1706523_+|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase
MLRSVVLAGGGTAGHVEPALAVADALRATDSRVRLTLLGTATGLEARLVPARGHELATVPKVPMPRRPTPAVFKLPARFLDAICQAGETLDLVRADVVVGFGGYVSAPAYLAARRRGIPIVVHEANPLPGLANRLGARLTPFVATSYPSTPLRGATLTGIPLRGEILTLDRSPAAMRAARARYGLDPHRPTLLVFGGSQGARSLNQVMTAAAHPLAAAGIQVLHATGPKNFDEVAAALPLDLPTPYELRPYLDHIPSAYAAADMTLCRSGAMTCAELAAAGLPAVYVPLPHGNGEQRRNALPTVEAGGGLLVDDAELSASWLLENALPVLISAERLAKMSAACAGSGHPQAAAAIVAMIRDAAATRRRSRPRHAAP
>NC_007777.1|WP_011435856.1|1703796_1705389_+|putative-lipid-II-flippase-FtsW
MAGSGASSPPSTGTSARPARAARGPKAVRTGSAAEPDSAGGGTGAADGAEARLPLLDRPLASYYLLLSSAALLLVLGLVMVLSASSVRSYADFGSSYTLFIRQVIWVAIGLPVVAVASRLPVRVFRAFAYPLLLGTVLMLMAVLIPGIGSVRGGARQWIVVGPITIQPSELAKIALALWCSDLLVRKRRLLSDPKHLLVPLVPVFLFIDLLLLLEPDLGGAICVTVVPLTVLWVIGTPMRLYTGILGSMVAAASVLAVVEPYRVRRLLSFTDPFADAHGDGFQAVQGIYALSTGGWWGEGLGASREKWPQLLPAVHTDFILAIIGEELGLVGSLVVVGLFGVLGYAGLRIAHRCDELFVRLAAAGVTAWILVQAVVNIGAVVGLLPITGVTLPLVSFGGSALLPTLAALGMLLSFARSEPAAAEFLSRRAEERHAARLAASGRRRQRWRRGRERRADATGVIPREERRPPGRRGHRPDLGLVPVDDARSGPVGPVPESGSGRSSGRISSRVRARVTGAGLPGRRRDVSSS
>NC_007777.1|WP_011435855.1|1702378_1703794_+|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase
MTGDGQGPGDGQGPGNLTTSISWAGLPVLVVGIGVSGLAAARALLARGARVRVVDAGDSPRHQGAAATLRALGAEVNLGGLPAGPGDSALVVTSPGVPPTAPLITGAAGAGIPVWGEVELAWRWRGGSRWLAVTGTNGKTTTTEMLGAMLAAGGRRSTTAGNIGTPIVDAVAAEPPYETLAVELSSFQLHYTHTMAPLAAAVLNVAPDHLDWHGGAAAYAAAKAGIWRRPGTTAIGNADDATSADLLAAAPGRRVLFGLDPAARPRPGLTVVDGHLVDDAFGGGRLVAVRDLVLTSPHMISNALAAAALARAEGVGPAAIGAALVAFRPGAHRNAEVAVIDGVRWVDDSKATNPHAAAASLAGYPSVVWIAGGLNKGLAFDDLVRDARRVLRAAVLIGRCADEIAAALARHAPDVPVERADGMDDAVKAAAAFATTGDTVLLAPAAASMDMFRDYAARGDLFAAAVRAREG
>NC_007777.1|WP_011435866.1|1714743_1717953_-|isoleucine--tRNA-ligase
MSTPLRHPTFAPLPAQVDLPALERETLARWRDTKVFHRSLEATADRPLWVFYEGPPTANGRPGAHHVEARVFKDLFPRYRTMKGYHVPRRAGWDCHGLPVELAVEKELGFTSKNDIEAFGIAEFNARCRESVLRHVADFSAMTERMGYWVDLDGAYRTMDTSYVESVWWSLKQIFDQGLLVEDFRVTPYCPRDETPLSDHEVSQGYSDVDDPSVYVRFPLVADALGLAGQGAQLLVWTTTPWTLVSNTAVAVHPEVEYVLARAGDGELFVVAEPLVTAALGEDAEIVERFRGAELAGARYTRPFELLAAERFAAGTGVPHSVVLADYVTTTDGTGLVHQAPAFGAEDLAVCRASGLPVVNPIGTDGRFLADVPLVGGMFFKDADAPLTADLRERGRLWRASTYTHSYPHCWRCHTPLIYYPLPSWYIRTTAIRDELLAQNERTTWHPERIKTGRYGEWLRGNVDWALSRNRYWGTPLPVWRCDDDPTHLVCVGSLAELSELAGRNLADLDPHRPFVDEVTGTCPTCGGASHRVPEVIDVWYDSGAMPFAQWGAPHHNLAAFTRQYPAQYICEAIDQTRGWFYTMMAVGTLVFGRSSYETVLCLGLLLDADGRKMSKHLGNVLDPFELFERHGADAVRWLMLAGGSPWADRRVSHEAIEDIVRKVLLTYWNTSSFFALYAGAAGWRPGADPAADPRATPPARRHVLDRWALSELAATVAEVDDALENFDSLRAGRRIARFVDDLSNWYVRRSRRRFWAGDADALSTLHTCLDALTRVMAPFTPFLTDWLWSRLFADASPRTPDSVHLAAWPELPAGLHTPELSEQMDLVRRIVELGRAARAASGVRTRQPLPRAVVGASAFDELSPELIAQITEELNVTTVEPATSEVVDISVKPNFRALGRRFGRNTKAAAAAIAAAGPPVNGRLTVTVDGEDVELSGDELIITETPRQGWAVTAESGLSVALDLEISPQLARAGLARDVVRVLQDARKAAGLEITDRVDVSWAATREETALALRTHGQTVAEEVLAVSFTEAARTELPAAQPRETAARSAAEELGLAFTLTRHETTGG
>NC_007777.1|WP_011435867.1|1718524_1719130_+|signal-peptidase-II
MSTKPSAPPGGSTPVPHGRDEARPTAGSRRAVATLTVAAAIVLLSDILTKHVAVATLSDRGPVEVIPGLLDLELTRNSGAAFSLAGGATVLLSLVALAVVAVVVFTARRLRSVGWALVLGALLGGAVGNLADRLFRAPGPLRGHVVDFVHLHYWPIFNVADSAIVCGGVLAVILSLRGVGLDGTRYAEHHPPGGGSDHHGR
>NC_007777.1|WP_011435868.1|1719110_1720052_+|RluA-family-pseudouridine-synthase
MTITGGDLRSLPVPDGLDGVRLDAAIARMFGLSRTVAAALVDDGQASLDGKVRGRSDRVSGGAWLEVRLPAPPRPVAVEPTPVEALGILYDDDDIIVVDKPVGVAVHPAPGFTGPTVIGALAAAGYRISTSGAAERQGVVHRLDVGTTGVMVVAKSERAYTLLKRAFRDRTVDKRYRAVVQGHPDPLRGTVDAPIDRHPRRPGLFAVVADGKPSITHYDLQEAFRAASLLSVRLETGRTHQIRVHMSALRHPCVGDLAYGADPTLAERLGLTRQWLHAARLSFDHPGHGGRVEFTSPDPADLAEAVERLRDQP
>NC_007777.1|WP_011435869.1|1720048_1721131_+|hypothetical-protein
MTEPATLGEATSAPVPAPAAPGGAVPAPAPACRGWSTVRPPVHGLGALLDRVDARTLPATSRAIAIVRVWMVGLAEREIGRVRRTRDRVRRTRDRVRPSPAGSDDDDGPPALLDVAGVTPGGVVDWGVRMLVLGLVALIVVSATAAILQGVDHAPSSGPSSSATEQAATSANQPAAPDQPVAPALPAVTIGPGPNDPVADYLGASRQNLALLTSAAPGADLYAVASLTAPRTPADLLEVFGDFRTVQVFFTAGIGGEQEQAVVRDPVADVRAAFGSAAAQADARAAADTQVGNTAAADRERRAANDLRAGCGCLFAVVVRAPAGRLSQLETDPRVRVVDPAPPGSGPPGVRFIPLSPDRR
>NC_007777.1|WP_035730575.1|1721321_1721966_+|hypothetical-protein
MKLAKGTREVFDAESLLEEYLGPRKRGLRYAYPYYDGLVTNSDPDLLCTGDLLAPCLLGVHVDLDRMHTLTALMPLLQRALDRLPPGIELIEADEVTLDLVAALYDPLDDPDVSDRDVKGSLIAKVLHRKRPALVPLFDSKVRIFYQHEDCVPPSPRDGRSWRQYMGLLIRAMQYDLRENAEEFRRLGALVPVAGPPITPLRMLDVVVWMSSAV
>NC_007777.1|WP_011435871.1|1722015_1722978_+|ABC-transporter-ATP-binding-protein
MVDVLSYAVRGLTRRHGTGEHAVLANDRIDLDVRQGEVFGVLGPNGAGKTTLVRQLMGLLRPDAGTITLFGRDVLAARGLPARLAAYLGQDDLALAELPVATAVATTARMRGVPRSAVRAVRDAVLGELGLEAVAHRPLSKLSGGQRRLACVATTLVGDRPMLVLDEPTTGLDPVARRAVWSALQRRRDTVGVTVLLITHNVLEAESVLDRVAVLDAGRVIACDTPGQLKASLSGDVRLDLAWRHDPPADDPTVATLAALAVVNGRRWTIRLAPAAARDALGRLTAGPAFAALDDFSLATPSLEDVYLTLGGRSRDLERA
>NC_007777.1|WP_076804224.1|1722991_1723885_+|ABC-transporter-permease
MTVVPDARGAPGGGAPGVPAPSVADGRPAPATRPVSASAPPSSAPPQLPPPTSFRTAFGAVYRGQLARSKVGRIPLLFVASFQSVGILVLLRGILDVGDTTAAGQVVAGSTVLVVAFVALNLLAQRFGALRAAGALDYYLTLPVPGVAVVLGTAASYATFAAPGTVVTAVLGALLYGLPLSGLWLLLPVVALAGICLSGLGAAIGLLAPRPELATVAGQLGMSIVLFFGVIPSGRLPEVGRWARDALPSSYAVDALAAAFQPGVDWAKVVLDLGICAAVGMVALSVAAMALRRVGTS
>NC_007777.1|WP_011435873.1|1724067_1724811_+|hypothetical-protein
MMERSSGIRGVEPVALSVPPGDVPPGDGPHHPGQPTLDPAIAVPAAGEPAPPGRNPGRAFGARSAAVAGLICAAAMALAGFPLGLLWAATAPHLDLAVALDGHESAFTVQSDIDVRFALICAVAGVIGGAVACWRVRDAGWPVPVGLAAGGIGGSLIAGWIGHLRRSPQLLHALPKDASPLLTDLVDMKVRAGGLYFVMPVTALLVLLVGLWVTSRAQSDAAEDRRGPTAPGDAPGHGAGAEVGAGD
>NC_007777.1|WP_011435874.1|1724872_1725547_-|LON-peptidase-substrate-binding-domain-containing-protein
MSERLPLFPLGTVLLPGLVLPLEIFEERYRILVRKLLEQPADQVRRFGVIAIRRGREVGPALPAIHDVGCTAVLRRVQEHSDGRFSLITVGGDRFRIRTVDRHSEPYLVGDVDYLPDDVGDTDDTDDTVPAVQRLLRTYADRLAATGTVQISLPDLPDDPIALSYVIAAAAVTDVTERQGLLAAPDAANRLRAERALLRREIGLLEKITTIGSSELRRVDPSPN
>NC_007777.1|WP_023840530.1|1725821_1726202_+|hypothetical-protein
MWETEPELLVVFHRPDRGFSTGTGVDPLAELAVLGTVTSALRPRLALVALPPSRAPEVAALPGVCGVFIDQVPPALRETLTAAESLFVDGWLARRGAKRRDPAGGEPWDTPGYLPPDRPPGAAPAG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_5

2634572-2634683

Orphan

Consensus_repeat	Method
CCGAGCTGGCCGGCTAGACCGGGCCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007777_5

>merge|NC_007777|5|2634572-2634683|CRISPRCasFinder
CCGAGCTGGCCGCGGTGACCGGGGTTCCCGAGCTGGCCGGCTAGACCGGGCCGGTACCGGGCGGGGGTGCGGTGACCGGGGTTTCCGAGCTGGCCGGCTAGACCGGGCCGGT

>NC_007777|5|5|2634572-2634683|CRISPRCasFinder
CCGAGCTGGCCGCGGTGACCGGGGTTCC	CGAGCTGGCCGGCTAGACCGGGCCGGTACCGGGCGGGGGTGCGGTGACCGGGGTTT
CCGAGCTGGCCGGCTAGACCGGGCCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_011436662.1\|2624633_2625302_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NC_007777.1\|WP_023841324.1\|2644415_2644667_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_085949871.1\|2630705_2631722_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NC_007777.1\|WP_011436672.1\|2636769_2637444_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NC_007777.1\|WP_108913809.1\|2641586_2642690_+\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|239582
NC_007777.1\|WP_011436660.1\|2620629_2623374_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225461
NC_007777.1\|WP_108913806.1\|2643815_2644376_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NC_007777.1\|WP_157858572.1\|2625360_2626527_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376607
NC_007777.1\|WP_011436671.1\|2634953_2636708_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225098
NC_007777.1\|WP_035958790.1\|2629443_2630706_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NC_007777.1\|WP_011436664.1\|2627117_2628080_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182137
NC_007777.1\|WP_011436669.1\|2632543_2633887_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226359
NC_007777.1\|WP_011436661.1\|2623436_2624588_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173847
NC_007777.1\|WP_011436676.1\|2642880_2643228_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_035941706.1\|2638579_2641126_-\|DUF3516-domain-containing-protein	unknown	unknown	gnl\|CDD\|378795
NC_007777.1\|WP_011436665.1\|2628356_2629178_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293802
NC_007777.1\|WP_108913559.1\|2631780_2632536_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NC_007777.1\|WP_011436677.1\|2643465_2643864_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_035733051.1\|2644969_2645218_-\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NC_007777.1\|WP_011436673.1\|2637634_2638501_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|252734

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011436662.1\|2624633_2625302_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.7e-16
NC_007777.1\|WP_085949871.1\|2630705_2631722_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.51275e-65
NC_007777.1\|WP_011436672.1\|2636769_2637444_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.30987e-72
NC_007777.1\|WP_108913809.1\|2641586_2642690_+\|acyl-CoA-desaturase	gnl\|CDD\|239582	cd03505, Delta9-FADS-like, The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide range of bacteria. These enzymes play essential roles in fatty acid metabolism and the regulation of cell membrane fluidity. Acyl-CoA desaturases are the enzymes involved in the CoA-bound desaturation of fatty acids. Mammalian stearoyl-CoA delta-9 desaturase is a key enzyme in the biosynthesis of monounsaturated fatty acids, and in yeast, the delta-9 acyl-CoA desaturase (OLE1) reaction accounts for all de nova unsaturated fatty acid production in Saccharomyces cerevisiae. These non-heme, iron-containing, ER membrane-bound enzymes are part of a three-component enzyme system involving cytochrome b5, cytochrome b5 reductase, and the delta-9 fatty acid desaturase. This complex catalyzes the NADH- and oxygen-dependent insertion of a cis double bond between carbons 9 and 10 of the saturated fatty acyl substrates, palmitoyl (16:0)-CoA or stearoyl (18:0)-CoA, yielding the monoenoic products palmitoleic (16:l) or oleic (18:l) acids, respectively. In cyanobacteria, the biosynthesis of unsaturated fatty acids is initiated by delta 9 acyl-lipid desaturase (DesC) which introduces the first double bond at the delta-9 position of a saturated fatty acid that has been esterified to a glycerolipid. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXXH, HXXHH, and H/QXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the rat stearoyl CoA delta-9 desaturase. Some eukaryotic (Fungi, Euglenozoa, Mycetozoa, Rhodophyta) desaturase domains have an adjacent C-terminal cytochrome b5-like domain.	6.63978e-68
NC_007777.1\|WP_011436660.1\|2620629_2623374_+\|AAA-family-ATPase	gnl\|CDD\|225461	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription].	2.47644e-142
NC_007777.1\|WP_108913806.1\|2643815_2644376_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	6.59396e-40
NC_007777.1\|WP_157858572.1\|2625360_2626527_-\|acyltransferase-family-protein	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	1.73744e-09
NC_007777.1\|WP_011436671.1\|2634953_2636708_+\|AAA-family-ATPase	gnl\|CDD\|225098	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown].	2.0726e-76
NC_007777.1\|WP_035958790.1\|2629443_2630706_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.77872e-86
NC_007777.1\|WP_011436664.1\|2627117_2628080_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182137	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional.	1.51625e-33
NC_007777.1\|WP_011436669.1\|2632543_2633887_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	9.08551e-123
NC_007777.1\|WP_011436661.1\|2623436_2624588_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	5.07021e-162
NC_007777.1\|WP_035941706.1\|2638579_2641126_-\|DUF3516-domain-containing-protein	gnl\|CDD\|378795	pfam12029, DUF3516, Domain of unknown function (DUF3516). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 460 to 473 amino acids in length. This domain is found associated with pfam00270, pfam00271.	0
NC_007777.1\|WP_011436665.1\|2628356_2629178_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293802	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain. The tRNA maturase RNase Z (also known as tRNase Z or 3' tRNase) catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors. Two forms of RNase Z exist in eukaryotes, one long (ELAC2) and one short form (ELAC1), the former may have resulted from a duplication of the shorter enzyme. Only the short form exists in bacteria. Members of this bacterial subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	2.90536e-63
NC_007777.1\|WP_108913559.1\|2631780_2632536_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.74922e-67
NC_007777.1\|WP_035733051.1\|2644969_2645218_-\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	0.00029575
NC_007777.1\|WP_011436673.1\|2637634_2638501_-\|SAM-dependent-methyltransferase	gnl\|CDD\|252734	pfam04672, Methyltransf_19, S-adenosyl methyltransferase. This family contains a SAM (S-adenosyl methyltransferase) domain, with a central beta sheet with 3 alpha-helices on both sides. Crystal packing analysis of the structure Structure 3giw suggests that a monomer is the solution state oligomeric form. An unidentified ligand (UNL, cyan) was found at the putative active site surrounded by the residues His57, His170, Phe171, Tyr216 and Met22. The UNL is likely to be a phenylalanine or phenylalanine-like molecule. (details derived from TOPSAN).	2.5135e-129

>NC_007777.1|WP_011436669.1|2632543_2633887_+|ABC-transporter-ATP-binding-protein
MTDTTVTSRPILGEAPPPELPAPSGGVHFRGIMRRYGGTGRPALDVADLHLPHRSFTVIVGPSGCGKSTALRVITGLETPDEGRLTINGVDVTATPPGARGVSMVFQDFALYPHLTVEQNIAFSLRLEAKHNRGRLGLLRRGAGGAGPSRGEISRRVTEACVLLGLADLRHRRPGQLSGGERQRVGLARAIVRRPSVLLLDEPLSALDAQLRQQARAELVRLHRELGNTVVLVTHDQLEALSMGTHLVVMNGGRVAQAGTPEQVYRRPADVFVAAFVGSPAMNLHLVEVTNGGGALAAPGLSARLAGPLTLPRAWLGWRPGDGVIEAGPDRAAAAGGLAGAGLAGAGLVMEGLVDVVEFTGDVVVVHCVSGAAAAGETGEWDAGPDEVGPARWAVTVPAQAGVPDVGTPLRVRVPARRLHLFDPVSGQRVDEIDDDADDLAVADEPT
>NC_007777.1|WP_108913559.1|2631780_2632536_+|carbohydrate-ABC-transporter-permease
MLFPMLWALTTSFKPPADIYGANPLPIPASLSNYRNAIDGFPIGRLLLNTFVMATGVTILHLVAGVLAAWSFVRFSHAGQRLVSALVVIALVVPPQALMIPQFLLVSRLGWRNTFAGLIVPQLATCSLAVLLLREHIRGIPPTLLGAATLDGASHAETLRHIVLPLLRPALAAVAVVVFITTWNEYLWPTLVAPHRDTTTIQPGLQMFETQEGPEYGPLLAGAMLASIPVTIVYLFASRRITDAFLQAGLR
>NC_007777.1|WP_085949871.1|2630705_2631722_+|sugar-ABC-transporter-permease
MIGTRPRAARPRGVLPATVARRAVPWLYQTPVLVSLAVFVYGPLLFEAYLSLTNWDLIKPDQDFVGLANFRGLFEGEEFPRALSRTGLYVLVMLPFATVVPMALAIMLWKRPGRTSDIYRALLFLPVMLAPVANALSWRFVLDPLGGIVNVVTGGLGLGERDWLGDPSTALAAISLVTAARFVALNMLLYGAALAAIDRRCLDAARVDGATEWEITRRLVVPQLRGTTILLSFLCAVFAGQWTFTNIAVLTQGGPDNTTDNVYYRLYTYAFTYFDAGTGAAAALTIVVVLCALFGLSTLARRVAGTFGAPGRDRPTTRLAAALAAPLTALTRRRRAAL
>NC_007777.1|WP_035958790.1|2629443_2630706_+|ABC-transporter-substrate-binding-protein
MLAVAACGSDSDTASGTPAATPQGDTPATITFLSYNYGTPGLGGTGTQALLDAFAKAHPKITVKPQGVAVKDVLTRLRTDTAAGDPPDVAQIGWSKMAEAVDALPITPVQKVAGSEWESATAGISKSILSAVSTNGVVAAMPFTMSIPVMYYNADLFRAAGLDPQHPPTTLADVKAAALKIKATGKQGVYISVVDSGKSDYLTQSVVNSNGGSLVDKNGGVTLDKQPAVEALATIADLTASGAQPGVKAEAALAAFTKGDLGMFVTSTALLASAQKAAAGKFELRTAGLPSFGTKPARPTYSGAGLAVLAKDPAKQRAAWEFIKFLTSDEGFEIITSKIGYLPLRQSVATKLAGTPIVKLLEPALDQLDTVTPYTSFRGAKANQAVVVLQDEAVEPIVLRGADPQATLSKAAEKIRALSS
>NC_007777.1|WP_011436665.1|2628356_2629178_+|MBL-fold-metallo-hydrolase
MRLTVLGCRSGMPTGGQCSSSYLVCTAETKMLLDCGPGAATALSALGHPAVLDGIVISHLHSDHCYDLLPVGKALLASRTRYPMRFPTLPARDIPTRSEPIPLYLPRGGLDTFRTLAGLFPVATIPLLDKAFEVAFDVREYDPGETFKIGDCLVSLHGLRHAVPNCGIRIETADASLAYTGDTGVTDALVDLARGVDLFLAEATLELTDDSDHGHLSALDAAEAARLAGVGQLVLTHFVTDDPEWLAARRAEAERVFDGPVHLAAPARKFDVA
>NC_007777.1|WP_011436664.1|2627117_2628080_+|LysR-family-transcriptional-regulator
MEFRYLVSFLAIAEELHFGRAAARLHLAQPSLSQQLQRLEREVGVELVSRTSHEVRLTAAGRAFEVEARRVLDTARRAVSAAREAASGRVGVLTIGFNFPAGQRVLQPTLVRLGADYPGISTVLWEARSGPTLAALHDRKVDVALVFGGAPAVGLQSRRILTLPLVAIVGHHHPWADRQQASFRELARQRCVLFRREQSPAMHDAILAAAGRAGISLTVADEVDDSGATGIIVTTKSVVGFASSVRSGFVPGKGLAAVRLVEPVPTVGVQVVWHPDPPPVVEAFLRSLDNAGPFGEDAVPAPAAPQVPVLAHDGQPASGG
>NC_007777.1|WP_157858572.1|2625360_2626527_-|acyltransferase-family-protein
MGRLVDSTPPSRARDVDFLRLASVCVVVLWHWALSIDHFRGGVLVMPNPIARIPFAWLATWLLQVMPVFFVIGGFAHLAAWDAAGRATGSPRDDPARPWGPRARRFLRGRLRRLLPPMAVFAVVWAAVDAVLLLAVPDYPGLLRYGRAVLVPLWFLAAYLGVILVVPVTAAVHRRFGRRFILLLGAVVALVDLARFGTGSTVFGYVNTGLVWVFAHQLGYFWRDGVLRGPRRALLTALCGLAGLALVTTLDEYPRSMVATEGARRGNMFPTTAAIAVLAVFQLGLILLAAPALNRMLARRRPWTAVVTGNAVIMTVFLWHMTALLLAMVTMRAVGLPMPDEPTATWWAGRPLWVILPALFLAPLIVLFAPVERGAAAPRGPARTGPDD
>NC_007777.1|WP_011436662.1|2624633_2625302_-|TetR/AcrR-family-transcriptional-regulator
MPTVSFSLEKPPPAGSRRERILAAAARLMAERGYHGVSINDIGRAAGVSGPALYKHFPSKQAILGELLIGISERLLAEGTRRAAAAPSPDGTPSPDGTPSPDGTLDALVRWHVSFALDSPELIRIHDRDLTSMNPADARTVRRLQRGYVELWVAQLRARSPELAEGTARAAVHATFGLLNSTPYSAVTMSRPQLADLLHRLGLAALLAAGARRPAPGPAATR
>NC_007777.1|WP_011436661.1|2623436_2624588_+|acyl-CoA-dehydrogenase-family-protein
MPDTRLSEEQEALRKAVEAFAREVVAPGAARHDEEKTFPYEVVAQMADMGLFGLPFPAEYGGQGADFFALCLAIEELARVDSAVAITLEAGVGLGAMPIYRFGTPAQREEWLPSLASGRALAAFGLTEPDAGSDAGGTRTTARLDGGDWIINGSKAFITNSGTDITRLVTVTAVTGRTPAGHKEISSVLVPVPTPGFTAGPAYSKVGWHASDTHPLTFDDVRVPAENLLGARGRGFANFLQILDEGRIAISALAVGLAQACVDESVKYAKQREAFGAPIGRNQAIAFKIAEMEARTYVARAAYYDAASRMLAGLPVKKEAAMAKLFSSEAAVTNAREATQIHGGYGFMNEYPVARHWRDAKILEIGEGTSEVQKMLIARELGL
>NC_007777.1|WP_011436660.1|2620629_2623374_+|AAA-family-ATPase
MDTKARPTLAVSTKFQAPTYDTQLVGRDRLLDVLRDGRARRLALIHAPAGFGKTTLAVQWQRVLRAEGVPVAWLSLDRDDNDAVWFLSHLIEAVRRVEPTLGGDLVEVLEGHSDDAQRYVLTELVNQLAEHRRPLAIVLDDWHLIDAPQAVAALEFLLEAGPANLHLIVTSRTRSPAVGRLKVRNQVTEIDATQLRFDHRESAAFLLELNELDLDSTDVHRLWSSTDGWVAALQLATLSLRDSADPSALIRGFSGRHHSLGDYLAENVFDALPADLLDFLLTTSVCDRLCGDLAAAVSGQRRGQALLEELERRDLFLRPLDDNREWFRYHHLFVGYLRRRLERDHADRVVTLHRTASAWFADHGLLGEAVTHALAAGNDAGAVDLVERQAMHLVEHSRMAVLLSLVNKLPSALLPGRSRLQIAIAWANCLLQRAQPAQVALDHVRAALTPDDTSDTGKDILGEADVVQACIDVYGDRIYRAADLIAPYIAKNSGYRPWLVAVSSNIRTFVDIHTFAYDTAQARQRWANAFHDTTRGPFAGVYGRCFAGLAAFAQLDLVTAERLYREAVALAREAAGPRSHAARLAGALLGRLYYERGDIDAAERLLEECHELGAESGVADLMIATYSTLARIKTLRGEIEDVWHLLDEGSEAASQLVLPRLSAAVDHERLRLHLARGDLGRAQNVLARQSDDVARGGDGIAMATRHYQLAMRARVMAAQADYDGALRLLSQMHQESSSVAWRYAETATRIDLAVVHSLTGDTDTALRTLVPAVVAGARCGLVRTVTDAGPELLKIIGELRDASRCRRWPVELPTVPSDYLSKLLATAHADAERAAIPIIDRPAERNPAPEEPLNAREIDILRLLDRGLSNKEIARNLGLTINTVKWYLKSIYTKLGVARRGESVSEARRRRILA
>NC_007777.1|WP_011436671.1|2634953_2636708_+|AAA-family-ATPase
MTIQYVRDATPSTGADDHHAAGGMLSPTNPPSPASTPAQPRLRALYLSELETFETYETHSATLHLAADRVYKRKKPVNLGFLDFTDRRTRESVCRSEVALNRRLAPDVYLGVADLLDDTGEVIDHLVVMRRMPASRRLSTLVRRRSRVGPALRTVARALAVFHQRCETSPEIAVAGQRATLEGLWREGLEGISPYRGTLLDAAVVDEIGELALRYLAGRETLLGDRVRAGWIRDGHGDLLADDIYCLGDGPRILDCIEFDPRLRFGDVLGDVAFLAMDLERLGAPEEAAEFLDAYREFSGEVHPRSLQHLYVAYRAFVRAKVTCIRGGQGDPDAAEEARRLLAVAHRHLRAGRVQLVVVGGLPGTGKTTLAGRLAGVGDGWVLLRSDVIRQELTGMPLREGGPAADTTAGGYASALRNASGTATRTGARRDAGTGAAATSDPATSDPADGDPATSDPRFGTGRYAPEITDATYAEMLRRAEAALARGERVVLDASWSSARHRRAAAELAASVCADLVELHCVTAPEVAAARIGRRAAAGTDPSEATMAIHRAMAARADPWPSATVVRTAVPVAEALQTVLAHLD
>NC_007777.1|WP_011436672.1|2636769_2637444_-|response-regulator-transcription-factor
MDGIVGTVSIVGTVSTVRVFLLDDHEIVRRGIREMLSENGDIEVVGEASTAAEALRRIPATRPDVAVLDARLEDGNGIDVCRDLRSAHPEIGCLILTSYDDDDALFAAIMAGAAGYLLKQIRGTDLVGAIRTIAAGRSLLDPAVTQRVLTRLREGPAEDRKLATLGERERQILVLIAEGLTNRQIAGRIHLSEKTVKNYVSAILEKLELSSRTQAAVYATRIEK
>NC_007777.1|WP_011436673.1|2637634_2638501_-|SAM-dependent-methyltransferase
MTSADRHDPEVGQWWKSLAEERSPVDLRTDQPHAARMYDYFLGGKDNFPVDREAAEQARAAFPGASIAAVENRAFLRRATRFLATEVGIRQFLDIGTGIPTSPNLHEVAQGIAPDARIVYTDNDPIVLAHARALLASTPEGRTAYLDADLRDPERILAAPELRDTLDLTQPVALSMIAIFHFIPDADDPYGILGRLLAALPSGSYLALTHATADVNPSMEQLFITYRSRGIPGQQRTRAEVERFFAGLELIDPGVEMVHRWRPEEPAAEGEGPTDAEVSVYGGVARLG
>NC_007777.1|WP_035941706.1|2638579_2641126_-|DUF3516-domain-containing-protein
MTGPDDGPGGGPDPDALYDAFTRWVAEQGLELYPAQSEALIEIVSGSNVILATPTGSGKSLVAAGAHFAALAARRRTFYTAPIKALVSEKFFALCAMFGAAQVGMMTGDASVNDTAPIICCTAEVLANIALRDGVAADVGQVVMDEFHYYADPDRGWAWQVPLLELPHTQFILMSATLGDVSLFEADLTRRTGRETTVVRSAQRPVPLFYRFVTTPMHETIGELLETHQAPVYVVHFTQAQALERAQALMSVNVSTRAEKDAIARTIGNFRFTAGFGKVLSRLVRHGIGVHHAGMLPKYRRLVEQLAQAGLLKVICGTDTLGVGINVPIRTVVFTSLSKYDGSRVRLLSAREFHQIAGRAGRAGYDPVGNVVVQAPEHVIENERALAKAGDDPKKRRKVVRKKPPEGSVGYGLATFERLIAAEPEPLTSQFTVNHAMLLNVINRPGDAFASMRHLLTDNHSDRATQRRLIHRAIAIYRALLAAGVVERLDTPDELGRGVRVTVDLQLDFALNQPLSPFALAALELLDPASPSYALDVLSVLEATLDNPRQVLHAQLSKAKGEAVAAMKAEGVDYDRRMELLEEVSYPQPLAELLGAAFGLYRRGHPWVDDYELAPKSVARELYERAMTFAEYVAFYGLARSEGLLLRYLADAYKALRQTVPEDARTEEVVDLTEWLGELVRQTDSSLLDEWERLSNPAGDGAGATAGTTASGGGVDERPPAVTGNIRAFRVLVRNALFRRVELAALRRYDTLGELDGGYDGGFDADGWRAALEPYFAEHGEIGTGPDARGPGLLILDEKPGTPGTWTARQIFDDPAGDHDWGFSAEIDLTASDEAGVAVVRVTAVDRF
>NC_007777.1|WP_108913809.1|2641586_2642690_+|acyl-CoA-desaturase
MPTTTLGSGTLGSGTLGSAAARVAASRPGDYDGCPPGRSRPDPTLPSGPPLPARATGPRRSTRPDVADQSKTLGEQVLLAFFIVVPLLALLAAVPLAWGWGLGWHDLVIGAVMYLITGFGVTVGYHRLFTHGSFRTGRPLRIILAVAGSLAIEMGVTDWVAAHRRHHKYSDQAADPHSPWRFGHHGRGLAKGFLHAHVGWLFHPERTAPETFCPDLLADRDIAAISARFPWLVAASVLLPPLVGGLWSMSWAGAATALFWGALVRIALLHHVTFSINSICHTIGTRPFAARDRSSNVWWLAIPSLGESWHNLHHADPTSARHGVLPGQIDPSAALIRLFEKLGWAHDVRWPTAKRIAARRVDAGAGR
>NC_007777.1|WP_011436676.1|2642880_2643228_-|hypothetical-protein
MAGRDSEYERPILLSCGGCDVRWTALTAAHCPSCHETFAGTTTGFDAHRVKGACLSPERAGLRRDRGYWLSGDEQPPGRILRVSDRQGGSAGPAGARGGAGGGARGGAGTVRMAG
>NC_007777.1|WP_011436677.1|2643465_2643864_+|hypothetical-protein
MTSASPSYPESGLLARLRADGFVRRDLLALVPLGGAGLGVAYRPRAASAPTVSGGTGREDTDGREGADSPEGLKGRDGPRGAGGAVAPGVVRLAVPLAGAGQAARVLAGIEALLAPRWVWWSARSATRVPLA
>NC_007777.1|WP_108913806.1|2643815_2644376_+|recombinase-family-protein
MGLVVGAVRDARAARLDGVEAERLFTDKASGKDADRPKLDEMLAFVREGDTVLVHSMDRLARNLDDLRRIVRTLTAKGVRVEFVKEGLTFIGEDSPMATLLLSVMGAFAEFERALILERRREGIAAAKQRGAYTGRKPALTPGQARDLVARAAAGEQKSDLAREFGVSRETVYSYLRATETAAAAG
>NC_007777.1|WP_023841324.1|2644415_2644667_-|hypothetical-protein
MRIIRCTVDAAVAHQRITTRAGLDPHRTAHGDRDLLDDIAAGRHSLDGFVDISLDLPRLPVDTSDGYRPGLDTIAAFLTESVP
>NC_007777.1|WP_035733051.1|2644969_2645218_-|DUF397-domain-containing-protein
MRDGGVITGHIPAEQVPADFHRDDKVFEPGRPAITMRGTAGLDGPVLYFTEVEWEAFVAGVTAGEFDDLPGGLAEEPGRPSR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_6

2690382-2690564

Orphan

Consensus_repeat	Method
GCCTCGGCCTCGACGCGGGCCGCCTCGGCGGCG	PILER-CR

2 spacers

The CRISPR arrays of NC_007777_6

>merge|NC_007777|6|2690382-2690564|PILER-CR
GCGTCGGCCTCGACGCGGGCCGCCTCGGCGGCGTCGTTGGCCGCGCGGACCGTCTCGGCGGAGTGCTCGACCACCTGCCGCCTGGCCGCCTCGGCGGCGGCCAGGCGGGTCTCGGCGTCCTCCAGGGCGCTCACCGCCTCGCCGGCGACGGCCTCGGCCTCGGCGCGGGCCGCCTCGGCGGCG

>NC_007777|6|2|2690382-2690564|PILER-CR
GCGTCGGCCTCGACGCGGGCCGCCTCGGCGGCG	TCGTTGGCCGCGCGGACCGTCTCGGCGGAGTGCTCGACCACCTGCCGCCT
GGCCGCCTCGGCGGCGGCCAGGCGGGTCTCGGC	GTCCTCCAGGGCGCTCACCGCCTCGCCGGCGACGGCCTCGGCCTCGGCGCG
GGCCGCCTCGGCGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_023841898.1\|2694971_2695460_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|368218
NC_007777.1\|WP_035732973.1\|2684587_2684767_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011436734.1\|2699903_2700347_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011436724.1\|2688412_2689009_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NC_007777.1\|WP_035959139.1\|2691709_2692516_+\|methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|223757
NC_007777.1\|WP_167534314.1\|2695626_2696151_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|376573
NC_007777.1\|WP_011436729.1\|2694043_2694559_-\|Tn3-family-transposase	unknown	unknown	gnl\|CDD\|376561
NC_007777.1\|WP_023841897.1\|2693117_2694047_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_041257896.1\|2683527_2684148_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NC_007777.1\|WP_011436719.1\|2686049_2686334_-\|Sec-independent-protein-translocase-subunit-TatA	unknown	unknown	gnl\|CDD\|234797
NC_007777.1\|WP_011436721.1\|2686687_2686966_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NC_007777.1\|WP_011436722.1\|2687063_2687747_+\|DUF2599-domain-containing-protein	unknown	unknown	gnl\|CDD\|378494
NC_007777.1\|WP_035733534.1\|2702164_2702512_-\|DUF190-domain-containing-protein	unknown	unknown	gnl\|CDD\|376875
NC_007777.1\|WP_011436723.1\|2687824_2688406_-\|TIGR03086-family-protein	unknown	unknown	gnl\|CDD\|274424
NC_007777.1\|WP_011436735.1\|2700552_2701782_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340928
NC_007777.1\|WP_011436725.1\|2689118_2689793_+\|formylglycine-generating-enzyme-family-protein	unknown	unknown	gnl\|CDD\|335469
NC_007777.1\|WP_011436736.1\|2701778_2702168_-\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|223317
NC_007777.1\|WP_108913407.1\|2684908_2685958_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271180
NC_007777.1\|WP_023841343.1\|2684220_2684397_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011436738.1\|2702508_2703030_-\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011436738.1\|2702508_2703030_-\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	3.08051e-33
NC_007777.1\|WP_011436724.1\|2688412_2689009_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.78086e-13
NC_007777.1\|WP_035959139.1\|2691709_2692516_+\|methylenetetrahydrofolate-reductase	gnl\|CDD\|223757	COG0685, MetF, 5,10-methylenetetrahydrofolate reductase [Amino acid transport and metabolism].	1.53979e-24
NC_007777.1\|WP_167534314.1\|2695626_2696151_-\|IS5-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.66993e-09
NC_007777.1\|WP_011436729.1\|2694043_2694559_-\|Tn3-family-transposase	gnl\|CDD\|376561	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain. This family includes transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from E-coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu895 (numbering as in Tn3) may correspond to the D-D-35-E motif previously implicated in the catalysis of numerous transposases.	4.65681e-26
NC_007777.1\|WP_023841898.1\|2694971_2695460_+\|DinB-family-protein	gnl\|CDD\|368218	pfam04978, DUF664, Protein of unknown function (DUF664). This family is commonly found in Streptomyces coelicolor and is of unknown function. These proteins contain several conserved histidines at their N-terminus that may form a metal binding site.	7.4018e-52
NC_007777.1\|WP_041257896.1\|2683527_2684148_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	3.16979e-44
NC_007777.1\|WP_011436719.1\|2686049_2686334_-\|Sec-independent-protein-translocase-subunit-TatA	gnl\|CDD\|234797	PRK00575, tatA, Sec-independent protein translocase subunit TatA.	1.85313e-31
NC_007777.1\|WP_011436721.1\|2686687_2686966_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.32274e-10
NC_007777.1\|WP_011436722.1\|2687063_2687747_+\|DUF2599-domain-containing-protein	gnl\|CDD\|378494	pfam10783, DUF2599, Protein of unknown function (DUF2599). This family is conserved in Actinobacteria. The function is not known.	9.9043e-06
NC_007777.1\|WP_035733534.1\|2702164_2702512_-\|DUF190-domain-containing-protein	gnl\|CDD\|376875	pfam02641, DUF190, Uncharacterized ACR, COG1993.	1.57855e-46
NC_007777.1\|WP_011436723.1\|2687824_2688406_-\|TIGR03086-family-protein	gnl\|CDD\|274424	TIGR03086, TIGR03086, TIGR03086 family protein. This family, like pfam07398 and TIGRFAMs family TIGR030834, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized.	7.17775e-21
NC_007777.1\|WP_011436735.1\|2700552_2701782_-\|MFS-transporter	gnl\|CDD\|340928	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily. This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.95205e-90
NC_007777.1\|WP_011436725.1\|2689118_2689793_+\|formylglycine-generating-enzyme-family-protein	gnl\|CDD\|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	1.01878e-32
NC_007777.1\|WP_011436736.1\|2701778_2702168_-\|CrcB-family-protein	gnl\|CDD\|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	4.36041e-30
NC_007777.1\|WP_108913407.1\|2684908_2685958_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271180	cd00799, INT_Cre_C, C-terminal catalytic domain of Cre recombinase (also called integrase). Cre-like recombinases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The bacteriophage P1 Cre recombinase maintains the circular phage replicon in a monomeric state by catalyzing a site-specific recombination between two loxP sites. The catalytic core domain of Cre recombinase is linked to a more divergent helical N-terminal domain, which interacts primarily with the DNA major groove proximal to the crossover region.	5.01684e-67

>NC_007777.1|WP_011436725.1|2689118_2689793_+|formylglycine-generating-enzyme-family-protein
MDAGVGNTLISIPPGRVTLSDRRTQRSWSVELAPYCLAAFPVTQEQYAAVGGQRPSSAHGDRLPVEGVSWWDAVRFCNALSHRDGMAPAYRVQADGEGVEWDTRAEGYRLPTEAEWEYAARAGTSGPRYGPLDDIAWYRGNSHGRIHDVGGKQPNSWGLYDMLGNVWDWCWDLYDTEVYGTYRVLRGGGWFDEHWSCRASVRRRGHPAFHLDDVGFRVARCAVP
>NC_007777.1|WP_011436724.1|2688412_2689009_-|TetR/AcrR-family-transcriptional-regulator
MRGVGVAPSRARLVDAAVACVLEQGWEATSMQAVRRRAGVSNGSLFHYFPTRGDLAAAVVGAGLADHQGALWGELHTSTGPRDGVTRLVTRHLRWVEEHPRLARLLLTAPVDVLRGSIDERTAADNRGFFAAVADWLRGHGWSDRPDLAVVVALWIGPAQEYSRHWLARPAGSPTLVADDLADAAWRTLGPLLTPRKE
>NC_007777.1|WP_011436723.1|2687824_2688406_-|TIGR03086-family-protein
MTRSLQCYRRALDTFTTIVTRVPADRWDAPSLCPVWTGRQLTGHVIDGQQQIVSLLTGHGPRPPVTDPALLTALAGPDPGASWQRTHQNTERTLAALDPATVVDTPLGARSVDEVLTVAVIEPLVHAWDLATTIGQTVQLDPDTVTATLPAVEALGGQLAATGMYAAAQPAPADSPPQDRLLAALGRRWTPRN
>NC_007777.1|WP_011436722.1|2687063_2687747_+|DUF2599-domain-containing-protein
MAGTAGSTASGIVGARLCALLVRVLLGVPAVGLLAVACGPDTPAGPHAIAGVHPPGGPTPAHSPSPSPEATHSPRAAGASTPYCGPSRYVEEIVVQQWADGRFRIQVRPTPEGRRAGDPGQVAAEIWQAVQGCVTGLRGEVADSLRDQLACHQNFAQLPALNGGKGFATGETYDLESWRPAPRPGGIRTWISTRCGNTLGTDPPGPPARIYRPDGVRPQRTVSGEQA
>NC_007777.1|WP_011436721.1|2686687_2686966_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MVWTLVSWMLLGLVAGAVARLLVPGPDPMSIPATILLGIVGSFVGGFLGYVLFNRDLSEGALQPSGIVGSIIGGIVVLLVWRAVGRRRTLHR
>NC_007777.1|WP_011436719.1|2686049_2686334_-|Sec-independent-protein-translocase-subunit-TatA
MGDIGAPELIIIILVVVVLFGSKRLPDAARSLGRSLRIFKSEIKGLHDDEAPAPTAAVAAAPTQVTGPAPAAPHTPPSAEPATPATGGSGNRSA
>NC_007777.1|WP_108913407.1|2684908_2685958_-|tyrosine-type-recombinase/integrase
MNDETTRPIAGPRALPAGSAGAAQPPVPVLAPGTDGQLTADLLARVGDYARAARSTATWRAYDSDLRQFRAWCERQTVPLCPLPATPATVAGYLATLADAGYKPSTIRRRLAAISVSHQLGRHPNPASAPEVCAVWDGIRRTRGVRPNRKAALDTSLLARVVAGLRDDDLADVRDRALLLIGFAGCLRRSELVGLDVADLLETPDGVVLTIRASKTDQEAAGALVGVAYGSYRPTCPVRAWRAWVDAAALTDGPAFRAVNRHGQVAPGRLYPGSVARIVQRRVAAAGLDPADFAGHSLRSGFATAAARAGVADRSIMRQGRWRSSASLDGYVRAGRLFDRDNPSGRVGL
>NC_007777.1|WP_035732973.1|2684587_2684767_+|hypothetical-protein
MAALSASVDAACEAEERMWEAARAARAGGVPIDLVAALTRRGRTTVYRHLPLGQDLGDA
>NC_007777.1|WP_023841343.1|2684220_2684397_-|hypothetical-protein
MMARYTCTYCGITSDRVATKAEASHLLATHMQVRHGGLGRGPQPAAIPRTGSRRVRRR
>NC_007777.1|WP_041257896.1|2683527_2684148_+|adenylate/guanylate-cyclase-domain-containing-protein
MARQDGTMAREDTGDIRQDPERDACITATSMFVGITGTTDIGRGIDPESLQEVLRRAFTLVRTIVSTHGGSVERFIGDAAFAVFGVPEPHVDDALRAVHAALEIRAATEALNTERHHNRDLRLRVRIGINTGEVTVAGGASGDPVNVASRLEHAAPAGEIFIGGTTYHLVRDSVTASEADPLVVQGRPVPLRVHRLIGLAAPSPAA
>NC_007777.1|WP_035959139.1|2691709_2692516_+|methylenetetrahydrofolate-reductase
MREPTAGHERPVRGFEMICEIEPPTRPDLTHARHQIGVLSPVTDAFLIPDNHIGRATVSSIAVAHEVATMGGRSIACVNSRDRNLLGFRRDLLTAAAYGVEEFLFVHGDKPTAGNRTGDLTVRAMMDEARAASEDPVFADMPAFRVGAAAGLRPLPTWKRAADFLFVQISYSVDALLRWRDAHPVELPIYAGVMVLASAGMARRLAAAIPDIDIPDNLVQAVERDQAAGVEAACDQVLRLRDSGAFAGVHLVPVSRYRQVATRLEDLL
>NC_007777.1|WP_023841897.1|2693117_2694047_-|hypothetical-protein
MTPTAPGSGGDSGGAWLTRIGELFGIVLAPVTVLTALLYDFGFVRAQALFGYFGLEVSQLDFSFQDLVLRSAQVVFRPLIFLAFLVLLTLAGHALLTRQLRRRPPTSRVARGASPATGLVAMLLFLTAAGSLDLINLKLIPVRVAPVALGMAAVLTEYAVHLAEQQCHRRRRRRARRGPPPPLMSAPLTRLRRATLAATLLIALFWGFSVEADRQGNQLARGIAATVGQRSAAIVYSTDRLPLSPDYQVDEVDLTPAKTIWRWRYTGLHVLAYRANRWFLLPTSWTKDNGAPVVILTEDPTRLRVDIVP
>NC_007777.1|WP_011436729.1|2694043_2694559_-|Tn3-family-transposase
MASIEEEAAGAADPIGEVSERAGRLVIKTLAEAGWKNLIRAAISIREGVRSSVTLLRRLGKVEAFHGFADWLMFGGDLIGHNDPDHHEKIVKFNELTANCVIHQNALDITDVVNQLVAEGQVVEPDDLATISPYIRENVRRFGEWGLDTTPPEQTVTRLDVTLPTSVDIRR
>NC_007777.1|WP_023841898.1|2694971_2695460_+|DinB-family-protein
MQASTAGERETLEAFLDFYRDVLVHKVRGVSDQDSARRMLPSLTTLAGLVKHLTVVERNWFGRLTDDPDTLPTGQEDTSWVLADTDTIDSLLAAYDQACAASRKAAAGYALDDIVATPVSRPDLPQVSLRWIYIHMIEETARHTGHADIVRELTDGATGVLG
>NC_007777.1|WP_167534314.1|2695626_2696151_-|IS5-family-transposase
MAAPVVIGDRGRGQPAGKKRGSLTGPNPVDRGKPGSKIHVLTDAGGLPLVVAVSPANPHDSGAFVPLVASIPAIRSRRGPRRRHPATLRAGKAYDQPERRRFLRRRGIAVRIARRGVDSTERLGRHRWKVERTLAWLGGYRRLSPRYERNGYNFLGFLCLAAAITCWKKLPHST
>NC_007777.1|WP_011436734.1|2699903_2700347_+|hypothetical-protein
MTRKHLVSTAASAALAAGLALTGAAPARATTAHVARSVATPDSRASYRLWTQRGYGYADVTKTWSAQKGYPGFYHGTVSGWVYHYHAPANRKVAVQVSADGRVFPPEGATSSYRYFSVKYAYTKRVLVRACLYRSGAKGVSFCGPWK
>NC_007777.1|WP_011436735.1|2700552_2701782_-|MFS-transporter
MIRPAHGTSTAPAAAVRLRPWRFVLVFGVVSMLADVVYEGARSVTGPLLASLGASAVVVGVVTGVGEAAALLPRLVCGPLAERTGRFWAWTIAGYTLTVAAVPLLGVTGVLWAAGLLVIAERVGKAVRSPAKDALLSHATAATGRGRGFAVHEAMDQLGALAGPLLVAAVLASGAGYGPALGVLALPGLGVLAVLLWLRARVPDPAGYEPDEPPAVPVPRTGPAAAPRARLPRAFWTYAGFTAATTTGLATFGVLSFHAVTRGLLPVAAVPVVYAAAMGVDALAALATGWAYDRHGPGVLAVLPPLAAAVPALAFTNTPALAVAGTLVWGAAIGVQESTLRATVADLVPPARRASAYGVFAGVVGATTAGGGALAGALYDLSIPALIAVTAAVQVAALALLAASRRIRP
>NC_007777.1|WP_011436736.1|2701778_2702168_-|CrcB-family-protein
MNWLLVIAGAAAGAPLRYLTDRAVQTRHDTVFPWGTFTVNVTASLLLGLVAGAAGAGAPPAWVASEQVVSLVGTGLCGALSTYSTFSYETLRLAEDGARLLAAANVAGSVLAAFGAAALGAALARAVWG
>NC_007777.1|WP_035733534.1|2702164_2702512_-|DUF190-domain-containing-protein
MMRLSGRALRLTVFVGESDVWHHRPLASEIVHRAHRAGLAGASVFRGVEGFGASSIVHTARLLSLSEDLPVAVVIVDDEQRVRAFLPQLDELVTEGLVILDEVEVIRYVGREASR
>NC_007777.1|WP_011436738.1|2702508_2703030_-|CrcB-family-protein
MDDTEQTVGAPTDPDGTDPDGDGPVPVRRRQLRHAPVAVLLLAVISAGGAVGACARYGASLVWPTMPGTFPWTTWAVNTAGCAAIGVLMVLITDVRTVHPLVRPFLGTGVLGGFTTFSTYALDAQRLVDGGRTGLALAYLVLSVLAALGAVWAAAAAMRWFVARTRRVAGRRA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_7

2855608-2855692

Orphan

Consensus_repeat	Method
GTAGGTCAGCGTGACGTACCGGTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007777_7

>merge|NC_007777|7|2855608-2855692|CRISPRCasFinder
GTAGGTCAGCGTGACGTACCGGTCCTGCGCAACCCAGTTCGCCGCCGTGTCCGGGTGCGTGTGGGTCAGCGTGACGTACCGGTCC

>NC_007777|7|6|2855608-2855692|CRISPRCasFinder
GTAGGTCAGCGTGACGTACCGGTCC	TGCGCAACCCAGTTCGCCGCCGTGTCCGGGTGCGT
GTGGGTCAGCGTGACGTACCGGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_011436867.1\|2862973_2863771_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|180591
NC_007777.1\|WP_011436868.1\|2863767_2865066_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|119339
NC_007777.1\|WP_108913397.1\|2860866_2861715_-\|prephenate-dehydrogenase	unknown	unknown	gnl\|CDD\|235824
NC_007777.1\|WP_011436859.1\|2843122_2843806_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NC_007777.1\|WP_011436861.1\|2845257_2846097_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_007777.1\|WP_108913868.1\|2859541_2860783_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NC_007777.1\|WP_035910892.1\|2835230_2835674_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367527
NC_007777.1\|WP_157858544.1\|2836711_2836870_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_148214911.1\|2841343_2843011_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NC_007777.1\|WP_011436869.1\|2865062_2865704_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|119339
NC_007777.1\|WP_011436856.1\|2838804_2839470_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_007777.1\|WP_011436866.1\|2861769_2862837_-\|4-hydroxyphenylpyruvate-dioxygenase	unknown	unknown	gnl\|CDD\|273528
NC_007777.1\|WP_035734592.1\|2859025_2859250_-\|MbtH-family-protein	unknown	unknown	gnl\|CDD\|377081
NC_007777.1\|WP_011436871.1\|2866868_2880338_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NC_007777.1\|WP_011436872.1\|2880334_2888152_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NC_007777.1\|WP_011436853.1\|2835958_2836702_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367527
NC_007777.1\|WP_011436855.1\|2837983_2838706_+\|phage-related-terminase-large-subunit	unknown	unknown	gnl\|CDD\|273684
NC_007777.1\|WP_108913519.1\|2839466_2840978_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NC_007777.1\|WP_011436870.1\|2865697_2866798_-\|type-III-polyketide-synthase	unknown	unknown	gnl\|CDD\|238427
NC_007777.1\|WP_011436860.1\|2843858_2845175_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011436867.1\|2862973_2863771_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|180591	PRK06494, PRK06494, enoyl-CoA hydratase; Provisional.	1.42343e-148
NC_007777.1\|WP_011436868.1\|2863767_2865066_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|119339	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.	3.61627e-32
NC_007777.1\|WP_108913397.1\|2860866_2861715_-\|prephenate-dehydrogenase	gnl\|CDD\|235824	PRK06545, PRK06545, prephenate dehydrogenase; Validated.	1.3823e-95
NC_007777.1\|WP_035734592.1\|2859025_2859250_-\|MbtH-family-protein	gnl\|CDD\|377081	pfam03621, MbtH, MbtH-like protein. This domain is found in the MbtH protein as well as at the N-terminus of the antibiotic synthesis protein NIKP1. MbtH and its homologs were first noted in gene clusters involved in non-ribosomal peptides and other secondary metabolites by Quadri et al. This domain is about 70 amino acids long and contains 3 fully conserved tryptophan residues. The structure of the PA2412 protein shows it adopts a beta-beta-beta-alpha-alpha topology with the short C-terminal helix forming the tip of an overall arrowhead shape. MbtH proteins have been shown to be required for the synthesis of antibiotics, siderophores and glycopeptidolipids.	2.30458e-32
NC_007777.1\|WP_011436861.1\|2845257_2846097_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.51725e-27
NC_007777.1\|WP_108913868.1\|2859541_2860783_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.13697e-76
NC_007777.1\|WP_035910892.1\|2835230_2835674_+\|hypothetical-protein	gnl\|CDD\|367527	pfam03496, ADPrib_exo_Tox, ADP-ribosyltransferase exoenzyme. This is a family of bacterial and viral bi-glutamic acid ADP-ribosyltransferases, where, in Aeromonas salmonicida AexT, E403 is the catalytic residue and E401 contributes to the transfer of ADP-ribose to the target protein. In clostridial species it is actin that is being ADP-ribosylated; this result is lethal and dermonecrotic in infected mammals.	5.44761e-10
NC_007777.1\|WP_011436866.1\|2861769_2862837_-\|4-hydroxyphenylpyruvate-dioxygenase	gnl\|CDD\|273528	TIGR01263, 4-hydroxyphenylpyruvate_dioxygenase, 4-hydroxyphenylpyruvate dioxygenase. This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see . In some bacterial species, this enzyme has been studied as a hemolysin. [Energy metabolism, Amino acids and amines].	1.77601e-124
NC_007777.1\|WP_148214911.1\|2841343_2843011_+\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	2.03337e-17
NC_007777.1\|WP_011436869.1\|2865062_2865704_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|119339	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.	1.92285e-17
NC_007777.1\|WP_011436856.1\|2838804_2839470_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.51782e-64
NC_007777.1\|WP_011436859.1\|2843122_2843806_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	4.06944e-99
NC_007777.1\|WP_011436871.1\|2866868_2880338_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NC_007777.1\|WP_011436872.1\|2880334_2888152_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NC_007777.1\|WP_011436853.1\|2835958_2836702_+\|hypothetical-protein	gnl\|CDD\|367527	pfam03496, ADPrib_exo_Tox, ADP-ribosyltransferase exoenzyme. This is a family of bacterial and viral bi-glutamic acid ADP-ribosyltransferases, where, in Aeromonas salmonicida AexT, E403 is the catalytic residue and E401 contributes to the transfer of ADP-ribose to the target protein. In clostridial species it is actin that is being ADP-ribosylated; this result is lethal and dermonecrotic in infected mammals.	8.60141e-07
NC_007777.1\|WP_011436855.1\|2837983_2838706_+\|phage-related-terminase-large-subunit	gnl\|CDD\|273684	TIGR01547, Uncharacterized_protein_YqaT, phage terminase, large subunit, PBSX family. This model detects members of a highly divergent family of the large subunit of phage terminase. All members are encoded by phage genomes or within prophage regions of bacterial genomes. This is a distinct family from pfam03354. [Mobile and extrachromosomal element functions, Prophage functions].	7.3532e-14
NC_007777.1\|WP_108913519.1\|2839466_2840978_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.87158e-41
NC_007777.1\|WP_011436870.1\|2865697_2866798_-\|type-III-polyketide-synthase	gnl\|CDD\|238427	cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.	2.70626e-93
NC_007777.1\|WP_011436860.1\|2843858_2845175_+\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	1.34996e-17

>NC_007777.1|WP_011436861.1|2845257_2846097_-|alpha/beta-hydrolase
MPVARINGINLSFDDYGVGAPVLLVTGTGAPGRVWRTHQVPALRAAGYRVITMDNRGIPPSDAGPEGFTLADMVADTAALIEHLGVEGCRVVGFSLGAMIVQELLVARPRLVGQAVLMATRGRSDALATAMSLAEIELYDSGVTVPARYAAFMHALQSLSPRTLNDERQIRDWLDVFEVSAVTLSAARGQLGLELIPDRRPGFAHIQCPCLVIGFQDDLIVRPPLCREVAEAIPGATYEEIPGCGHYGYLERPTEVNSAILGFFARQTTGAVPGQVIVT
>NC_007777.1|WP_011436860.1|2843858_2845175_+|ABC-transporter-permease
MFVLTYLRRELRHRSRQAMLVATGLAVGVGLVLATTATAAAVDDAQTAVLHTLNGIGTDLTVTATPSADRRAGATGSGSADGSGSADGASSTGLSVAGGAVLDSSTVRAIAGLAHVAGVADSLVLSEITLPPTGSGGIPTSTRIDGIDVTRLGLGPAASATLRSGRPLSRADSRGDVAVIDTQYAAAHHLGVGSTITVAGTRFAVVGIVSQPTATGAASIYLPLAAAQRLPAGQHSKPLAGKVSTIYVSASTAADVGAVETELAALLPSATLSSSRDLAEAVNGSLASATTLMHDLGTWLTVGVLLATVAAASLFTLASVTRRTRELGTLKAIGWTSWRVITQIMAESGTVGLAGAALGVAVGYAGIGLVNAVAPTLTATVGTGTGAHNLAVHLNAHTEPSTLAAAALIAIAAALIAGTLAAWRTTRLRPAHALAEVE
>NC_007777.1|WP_011436859.1|2843122_2843806_+|ABC-transporter-ATP-binding-protein
MYTLTGVSKTFRARGSTVTAVRDLNLSIADGEWLAIQGRTGSGKSTLLQLLGGMDRPSTGTVNLDGQDLATMSEKQLTEIRAARVGFVFQMFNLIPTLSAIENVEAALVPLRTPAVQRRERAAAALAAVGLADRAGHLPSELSGGQQQRVGIARALVKEPSVLLADEPTGNLDVDTRDEILTLLEQIWTANQLTLVLVTHDSAVAALAERVAVMHDGKLDITGTRIG
>NC_007777.1|WP_148214911.1|2841343_2843011_+|ABC-transporter-permease
MPGLEDVARSRVGYQLAGYQLAGYQLAGYQLARPGSGSAAATTAGPGWWIAARSGYPVHAVRAFVGEPAPAVRKRVMTALGTHRPAHAPATSSSRFFVTYLLRGLRGRARQTVIVAVGLAVGVAAVVTLTAASTGVSRAQTTVLHSLYGVGTDISVTTAATSGSGSSGSGSNQGLVTSGDAGKEFFRLPPGLGLLDSSALAPISKMSGVAEVAGGLSVGETVVGPTPSTGGLPSLTSTSIDGVDVAHLKLGPYASGTLTSGRSFTTADADADRAVIDARYAAAHNLGVGSTIVIAKTRFTVIGIISQPAASDPEDVFIPLGRARALASSARPDLAGKLTAIYVAAAGAADIPTVHDEVAKLLPSATVTSSSDLASRVSGSLASAADLARDLGRWLAVAMLLAAFALAALLTTAAVRRRVREFGTLKALGWHTRRIIAQIMAESLVTGLAGAAVGIGLGFAGAAVIDAIAPTLTAAVALNPGSTPPQGALIKNGSLETMTLPGGVHTLSVHLHATVGAATILLAVVLAIVGAVLAGALGSWRVARLRPAHALVRVA
>NC_007777.1|WP_108913519.1|2839466_2840978_-|HAMP-domain-containing-histidine-kinase
MRQQATVVSAHGGFSARWFQCGICERWQPSVSDLAERARTAAAASGTPAEPPEPARRAVSAAAAAPRSSGLVARLRRWPWARLLPRTVRLRLTLLYGSLFVLSGAALLAITYLLVLHVTATIQITTTPTGMPETQGGPLNGQPAPPRASSAVASQVHHSYLHQLLVESGIALAIMAVVSIWLGWLVAGRVLRPLRTMTATTLRISQENLHERLDLPGPQDELTDLGDTIDGLLARLETAFEAQRRFVANASHELRTPLTMMRTSLDVAEGKPQPVPREVTVLAGKLREGLDQADRLIENFLTLARAHQGAPGNDAAVSLTGLVVAALAAREPHAAELGVHIHRQLAAVEIIGNPTLLRRLVDNLLDNALRYNHPGGFVHVQVQVRCHPATGGTDDARIAHLTIENAGPPLDDADVQQLGQPFRRLAADRTTAGSVGLGLSIVAAIAAAHDGALHLSARPEGGLRAVITMPLVGRAPVSGVPRVPRVPGGRGEAGVAVRPGGSR
>NC_007777.1|WP_011436856.1|2838804_2839470_-|response-regulator-transcription-factor
MRVLVVEDVHRLADDIAEGLRDHGMAVDVSYDGLDAAAKLDVNRYDVVLLDRDLPGLNGDMLCRMIIDSEDPAMVLMLTAADTSADRVTGLSLGADDYLPKPFHFPELVLRVRALARRRPTAQPRVLKAGGVELDPLRHTAIRDGRRLDLSAKEFAVLEALLRAMPAPLSAERLLEQVWDEYADPFTKTVSVTIGRLRRKLGDPPVIETLAGVGYRIIPAD
>NC_007777.1|WP_011436855.1|2837983_2838706_+|phage-related-terminase-large-subunit
MDNPSLSPAYVEALKKEYVGLWYARFVEGRWIMAEGVVYDMWDEDRMVEDEIPSIVRWVGTGVDHGQVNPFNAIVGGIGVDRRLHLVAEYRYESKLARRQKTDAEYSMALQEFHAQVPIPGTSLRGVRPEYICVDPSAASFVTQLYRDGVSGVMNADNAVLDGIRMVASLMGNDRLRVHRSVKGWREEVGSYAWDDDASERGEERPVKTEDHAMDSARYLIKSTEPLWYSTLRQPLQPAA
>NC_007777.1|WP_157858544.1|2836711_2836870_+|hypothetical-protein
MSENPPPPKDDRLDRFVSNPGDSIIYGPDGKPWKPGDPIPARNKTDTDNSSK
>NC_007777.1|WP_011436853.1|2835958_2836702_+|hypothetical-protein
MRVPRPCGALTLRGTRCKNPAAPGMPICAVHEKTRKKLAELARHNRARNTGWRPLPSGTLRGKDADRYLVGLADASRIPEASRRAVWTYSGPHSPINPTLRARTLSDNPDIAHVVADLDAAFDAVPQTTRPISVHRGLRHVDRFLPPDATGFRDRDLGFRSMTTDVSVAEDFTRFGPPTATRMIVEVEIPAGSKVLPVETLGTQFPGQNEVLLPRNTVFEFFSDETRTDANGRPVRYAKARIVGPQQ
>NC_007777.1|WP_035910892.1|2835230_2835674_+|hypothetical-protein
MNGHDVLRHGGESSADTARIMADLDDAFEQVVPLDQPITVIRGIGSVTDIAGEPPADGFVFRDHGFVSTTISDHIAASFSSGYDTATLKITIPAGAKVLSLIPPAPPAFKSRHPEENEILLPRDTVFEIVTDTKINSNREIEINVII
>NC_007777.1|WP_035734592.1|2859025_2859250_-|MbtH-family-protein
MTNPFEDESASYFVLVNDEGQYSLWPVFAEVPGGWSIVHGEDSRKACLDFIEENWTDMRPKSLIAEMAEYETAD
>NC_007777.1|WP_108913868.1|2859541_2860783_-|PLP-dependent-aminotransferase-family-protein
MNFLNEVTVRFPTAISFAPGRPYDGFFDIEQIFTQVRRYLDHLAERGDSPAQIRDALFQYGPSAGQIRKLIAESLRVDEGIDVPPESIVVTVGCQEAMFLALRALMRDPGDVLVVSSPCYVGITGAARLLDIEVTPVEERADGLHCADLAAAVAAERARGRRVRAVYVVPDHSNPSGVTMPLPARRALLDLAVRLDLLILEDSPYRLVSPGPQVPTLKSLDPARRVIHLGSYSKTVFPGARVGFAVADQVVRDASGGTGLLADDLAKIKSMVTVNTSPLSQAAIAGALLAADGRISELNGETSAYYGDTMRAMLQCLDKHLPAERRAERGVSWNSPRGGFFLTMRVPFRADNAALTRSAQDFGVIWTPMSYFYPKGGGDHSIRLSTSYLTRFDIEEGIARLVGFVESQANPPR
>NC_007777.1|WP_108913397.1|2860866_2861715_-|prephenate-dehydrogenase
MVIGAGLIGTSIALAVRDHGADVLLTDRDPAAARLAAGLGAGVVLPGGPAAYRGAPADLAVLAVPPAAVPAALRDAQKHQVAHVYTDVASVKQAPIAEAAKLGCDLTAFVGGHPLGGREWSGPLAARAGLFRGRSWVLCPTGESGAAAAATVTALVRACGARPVLMDPAEHDRAMAVISHAPHVVASAMAARFVDTPETIMRLTGQGARDVTRIAAGDPRLWLGIMSANAHPIADVLDEVARDLARTASALRSEGNTAVTDLLVRGRVGHGRIPDPQKVEDS
>NC_007777.1|WP_011436866.1|2861769_2862837_-|4-hydroxyphenylpyruvate-dioxygenase
MDIHSIDHIELFVEDAAQAAAELCDSFGFTVTGRGGPRTGLKGCESVLLRQCDITVVVTAATSSDHRAAEFVRRHGDGVAVIGFAVDQAQAAFAEAVNRGAVPVTPPETLGTPGGRVTFASVAGFGDVEHRFTSREAVEGPFSPGLIEETVPDRSNEGLLRAIDHVAVCLPAGELHPTVRAYRDVFGFTRTFEERIVVGSQAMDSQVVRSPSGKVTFTIIEPDTTRAPGQIDEFVRSHGGAGIQHIAFRTDDITAAVRDSAKRGVRFLTTPASYYEALPARLGPVGVPVETLRELNILADRDHGGVMLQIFTASRHPRRTFFHELIDRRGAHTFGSNNIKALYEAVERQRAAESA
>NC_007777.1|WP_011436867.1|2862973_2863771_-|enoyl-CoA-hydratase/isomerase-family-protein
MNEPRVRYAKKGHVASIMIDRPEVFNALDQRTHQELAAIWNDVEADDEVWVAVLTGAGDRAFSVGQDLKERAELTERGTPATSLGSRGQPGWPRLTERFTLSKPVIARVNGYALGGGFELALACDLIVAAEHAVFGLPEARLGLIPGAGGAFRLARQLPLKTAMGYLLTGRRMTAATALRFGLVNDVVSYPELDGCVAEWTDDIIRSAPLSVRAIKEVVLRSLDMPLPEAFSARYHWEERRRHSLDSAEGVRAFVEKRDPEWAGR
>NC_007777.1|WP_011436868.1|2863767_2865066_-|enoyl-CoA-hydratase/isomerase-family-protein
MTAGVAAPQRAEKALAEAAERAEERLAALPEPAVRSPEQRAEAAAVVDGIRLLRVRFMDAHADQVYDRLTAGRTIRLRLGELVEAAATAVPGLVPTTGQLAVERERPQRNKEGREIDQGIFLRAVLRSPLSGPHLLDSMLHPTPRALALLPEFRRTGSLRLETVRLDRRDGVAHLTMCRDDCLNAEDEQQVEDMETVVDLALLDPAVRVGLLRGGEMSHPRYRGRRVFSVGINLKRLHAGEISLVGFLLRRELGYISKIVRGLVAGEGATWRGGVIEKPWVAAVDTFAIGGGAQLLLVFDHVLAAADSYFSLPATREGIIPGVSALRLSRCAGPRLARQVILGGRRIWATEPAARCVLDEVVEPHELDAAVDRSVARLDGPAVVANRRMLNLAEEPVAEFRRFVAEFVLQQALRLHDQDVIDKVGRFAGSLA
>NC_007777.1|WP_011436869.1|2865062_2865704_-|enoyl-CoA-hydratase/isomerase-family-protein
MVRAKEIVLRIDGAQPLSAESVRRVAEVCDRVEDSGGTAALVAHVSGAPRGGVPEDLTVGLVTKWERALRRLERQSATTVAIASGDCGGTALDVLLATDVRLATPGTRLLVMTDGGATWPGMALYRLVQQVGTAAARRAVMFGAPIDAVEALRLGLLDELSDDPEGVPVEAFPGRELAIRRQLMFDASTTSFEEALGAHLAAYDRALRRGAAS
>NC_007777.1|WP_011436870.1|2865697_2866798_-|type-III-polyketide-synthase
MTISLDRPEPPAAALPHVRPIARIAGVGTAVTATSYTQRELLDILGVTDPRVRSVFLNSAIDRRHLTLPPADAAGRRVCEPQGDLLDKHKRLAVGMGIEALTACLKDAGAELADLGHLCCVTSTGFLVPGLSALIIRELGIDRHCSRSDIVGMGCNAGLNALNVVAGWSAAHPGELSVVLCVEACSAAYALDSTMRTAVVNSLFGDGAAAVAMVAGTPGPGARILKFASCVITDAIDAMRYDWDRDQGRFSFFLDPQIPYVVGAHAELVADRLLAGTGLRRSDIAYWLVHSGGKKVIDAVVVNLGLTRHDVRHTTGVLRDYGNVSSGSFLFSYERLCQEGVTRPGDHGVLMAMGPGSTIEMALVQW
>NC_007777.1|WP_011436871.1|2866868_2880338_-|non-ribosomal-peptide-synthetase
MKRSALSEVWPLSPLQEGLLFHATFDEQAVDVYSGQHVMELEGPLDAEVLRASGQAMLDRHANLRAGFRQTAGLAQPVQVIAARVALPWREADVSALPSAGAEAEADRLAAEDLDRGFDPAVPPLLRFLLIRFGARRHRLVITNHHILLDGWSLPIFKRELFGVYRAGGDSSGLKPVPPYRDYLVWLSRQDRQAARAAWRRELDGKQEPTRVVVADPGRDPVMTELTELRLGPEPTGALRELAQAHGVTLNTVVQGAWAMLVSRLAGRSDVVFGAVVAGRPPELPGVEDMLGLFINTLPVRVPLDPAQRVCDMLAALQARQSALTAHQYLGLAEIQREAGPGAVFDTLVVYENYPFDPTVAPAAPAAADPDSLRVTSRGGRQAAHYPLTLGIRPGRDGLALHVDYRPDLFDQRTAAELLARLVRILEAVAADPGVLVGRVPVLGAAEWVRVVEEWNDTGVGVGVGTLPGVFGGWVAAGRDVVAVVSGGVRVTYGELEVAANRVARDLVAAGVRSGDRVGVVMERSVELVAVLVGVVKVGAAYVPVDVEWPVVRVGRVLAEAGVRVVVADVGVSDLPGSVGVVWAGGWVDGEGECGPPAVRVGADDVAYVMYTSGSTGVPKGVAVTHAGVVGLAADRCWSREVHGRVLFHASHAFDASTWELWVALLSGGQVVVAPAGRVDAGVLKGLISDFGPTVVHVTAGLFAAVAEEAPGCFVGVREVVTGGDVVSAAAVVRVVEACPGVVVRQLYGPTEVTVCATVFEVRPGDEVASVVPIGRPMDNTRVFVLDRFLQPVPPGVTGELYVAGVGLARGYFGRPGLTGERFVACPFSGSGERMYRTGDLGRWTGEGQLVFAGRVDGQVKVRGFRIELGEVEAVLGLYPGVGRCVVVVREDEPGQKRLVAYVVASEGEALDTVQIRDFVAGLLPEYMVPAVVVVLSGLPLTGQGKVDRGALPVPDFAGRVGGRSPRTAVEEVLCGLFAEVLRLERVGVEDSFFDLGGDSLLAMRLIARVRGALGAEVSIHDLFTAQTPAGVARLVGGDGTARTALVAGRRPAVLPLSFGQARMWFLNRLQEGSAVYNMPMALRLRGDLDRAALRAALADVATRHESLRTVFPDSDGLPFQQILAGGPELVVQDTDERELPGLLAAEASRPFDVRHELPWRASLFALSPQEHMLLLVMHHIAADGWSMGVLTRDLSAAYAARLSGQEPSWAPLPVQYADFAVWQREVLGSEDDPDSLISRQLAYWRSTLAELPAELTLPVDRQRPPVASFAGGSVPLRLGPQVHARLTGLAQDERATLFMVMQAAIAVLLSGLGAGTDIALGTPVAGRGDAAVDDLIGFFVNTLVLRTDLGGDPSFAELLGRVREMNLAAYAHQDVPFERLVEELQPARSLSRHPLFQVMLTFQNTHQDGGWELPGLSVRPERSGSDVAKFDLSFSLAENRTPDGELAGISGAVGYSADLFDQRTAEETANRLVRVLEAVAADPTLRVSQVPLLDETERARVVDGWNETGVVVPEVTLSELFEAQVRRSPGAVALVCEGRVVSYGELEVAANRLAWRLVGLGVGAERVVAVAVARSVELVVALLAVVKAGGAYLPVDPEYPASRVGLMLADADPVVVLCTAETVGGLPEHPAVRLMVDDGGVVRDCPGTSPGVVVRPGCPAYVMYTSGSTGVPKGVVVSHRGIVNRLLWMQGEYGLGGDDRVLQKTSSGFDVSVWEFFWPLVTGACLVVARPGGHRDPRYLVDLVVAERVTTVHFVPSMLGLFLDEEGAALCGGLRRVVCSGEVLPGELVERFQGVLPGVGLHNLYGPTEASVDVSFWACPPGVSGVVPIGGPIWNVRLFVLDGFLRPVPPGVVGELYIAGVGLARGYVGRSSLTGERFVACPFSGSGERMYRTGDLVRWRGDGVLVYVGRVDAQVKIRGLRIELGEVEAVLAGDGAVGRVAVVVREDQPGHRYLVAYVVAAAGRGVDAAGLREFAARRLPEYMVPAAVVELAELPLTLSGKLDRKALPAPDFAGLVTGRAPRTPAEELLCGLFAETLHLDRVGADDDFFNLGGDSLLAMRLIARVQAVLDVEVNIRELFAAPTPAGIARLASGGGSARTPLVAGQRPEEIPLSFGQTRMWFLNRLQEGSAVYNMPMALRLRGDLDRDALRAALKDVAQRHETLRTVFPDRDGVPFQKILDGGPELVVRATSERDLADLLAAEAARGFDVRSEPPWRAELLVLAEREHVLLLVVHHIAADGWSIGVLTRDLSTAYAARLAGREPSWAALPVQYADFSAWQRQILGSEDDPDSLISRQLAYWRQSLAGLPAELTLPVDRPRPAVASFTGGTVPLRVSAEAHARLAGIARDRKATMFMVVQAAVALLLSRLGAGTDIPLGTVIAGRGDPALDGLVGFFVNTLVLRTDAGGDPSFSDLVARVREVNLAAYAHQDVPFERLVEELQPDRSLARHPLFQVMMTFQTTHQDGGWELPGLSVQPQRSSSDAARFDLSFTVGEHHTAGGAPAGLDGAVGYSADLFDRATAEKLAGRLVRLLETVAADPALRASRVPVMDEAEWAQVVHAWNDTAWNDTALKVSDRTLPELFEAQVRRSPDAVAVVFQDVGLTYAELDAAAGRLAARLTEQGAGPERVVAVALPRSAEMLVALLAVLKTGAAYLPVDVGYPSSRVAFMLADADPAAVVCTAETARALPGHPAVRTVLDDPRTAEAPAARQPTASGRIDPRHPAYVIYTSGSTGTPKGVVISHRNLVTFLAAMRIRPGLTEADVLLAVTTLGFDIAGLELFLPLVVGGRVVVAEREVALDPRRLAAEIVRHSATVLQATPVTWRMLVDDGWAGSPGLKALCGGEALPPDLAEAMIERCAQVWNMYGPTETTIWSTCRQLTAGGGVSLGTPIAGTRTYVLDDLLQPVPPGVVGELYLAGPGLARGYWARAGLTGERFVACPFSGSGERMYRSGDLVRWTAAGELVFVGRADTQLKIRGFRVEVGEVEAVLAVFPGVTRVVVVAREDRPGHRYLVGYVVPGDVDGRAVREFAAERLPEYLVPAGVVALPALPVTPNGKLDRGALPAPDFGGLVTGGAPRTAVEEVLCSLFAEVLRLDRVGVDDGFFELGGDSLLAMRLIARVQAVLDVEVNIRALFAAPTPAGVARLLDGGGRPRAALVRAVRPAVVPLSYGQTRMWFLNRFQEGGAVYNMPFALRLTGELDVAALRAALGDVALRHESLRTVFPDTGGVPRQEVREGSPVLSVVEVAAEDVPLLLRAEVGRGFDVGRELPWRVSLFVVSAREHVLVVVVHHIAADGWSMGVLGRDLSAAYAARLSGRAPSWVGLPVQYADYALWQRAVLGSESDPGSLLSAQLGYWRSALAGLPVELVLPVDRPRPAVASYRGGAVPVRVGAGVHGRLVEVARAGQATLFMVVQAAVAVLLSRLGAGVDIPVGTAVAGRGAAALDDLVGFFVNTLVLRVGLGGDPSFAEVVGRVREVDLAAYAHQDVPFERLVEEVQPVRSLARHPLFQVMLTFQNAPRTSGWELPGLQVSQVRAGGGGAAKFDLSLALTEHRDAEGGAAGLAGVLEYSADLFDRSTAEGLVGRLVRLLEVVGADPGLRLSQVDVLADGEYDLVVRAWNGSAVGGSAVGGSAVGVSARTLPEMFQAQVVARPDAVAVVCEDVRLTYAELDAAVNRLARLLVGLGVGPERIVAVALPRSVEMVVALLAVLKAGAAYLPVDPEYPAARQAFMLADAAPVVTLGTARTVGALPEHGAVRVVVDAPDTVRVLAGLPGTAVRDAERVRSLRPGHPAYVIYTSGSTGTPKGVLIPQRNVAALIETAGRVYGLGADDVWSLFHSYAFDFSVWEMFGALLLGGRVVVVAHSVSRSPREFVELLSRTGVTVLSQTPSAFYQVIGELAAAGVGSSLRYVVFGGEALEPARLRQWYDRYPGDVPVLVNMYGITETTVHVTHIALDRERVVAGTGSVVGGPLPGVRTYVLDEFLRPVPPGVVGELYVAGAGLARGYLNRPALTGERFVACPFGGSGERMYRTGDLARWTGDGGLVFAGRADAQVKIRGFRIEPGEIEAVLSGHPAVDQVAVVMREDQPGHRHLVAYLVPHQEIGAAEIRAFVAGRLPEYMVPAVVVEVAELPLTANGKLDRAALPAPDFGALATGRGPRTAVEERLCALFAEVLDLARVGADDGFFDLGGDSLLAMRLIARIREVLGTELNVRTLFAEPTPAGVAASLETRGEDDDFDVLLPIRTEGTRPALFCVHPVEGISWRYTGLADHLPADLPIYGLQARGLARTEPLPRTVADMAADYFERIRSVQPTGPYHLLGWSLGGVVAHALATHIQARGEQVGLLAILDGYPASTAVRSRPEDGREVMPKVRGKMDQRLDRMIEQVVGRGDVGRGDVDGERLRRIRSVLDNTMRLGAEFTPDVLHGDLLLFVALLDRLPSQPAAEAPTLWRPYVDGRIDGHEISGAHQELMQAEHLAEIARVITEKLARHER
>NC_007777.1|WP_011436872.1|2880334_2888152_-|non-ribosomal-peptide-synthetase
MSQLDVEDLWPLSPLQEGLLFQTLYDGRTGDVYSGQRDLDLTGPLDPALLRASGEALLDRHANLRAGFQQLSGLDQPVQVIARKVRLPWREVDLAHLAEEAALEQAMRLAAEERDRGFDPAQPPLLRFLLIRFGARRHRLVLTIHHILLDGWSQPMFTRELFAVYQAGGTTGGLKPVSPYRDYLEWLGRQDRQAAREAWRVELAGTDEPTLVAQPDPVREPQPAERVNTSVSPELTAALRALARGHELTMNTVVQGAWALLVSRLAGRRDVVFGAVVAGRPPELPRVEDMVGLFINTVPIRVPLDPAQPVAEMLTALQARQTALMSCHYLGLAEIQRITGPGATFDTLLAYENYPLDSSWVSAMADDRDLTITPAGGHEAPHYPLALAVVPGRDRLELRLSYQPEVYEREMAEGLAAAMVRVLAAIAADPAARVGTVGILDETGRDLVIRRWNDTAVPVDAGSLVTAFERRVAEHPHAVAIDGDVTLTYQELNARADRLARLLATLGVGTESLVGVLMERSAELVVALLGVVKAGAAYVPLDAANPLERMKAVIAEAAPVALLVGQATIDHPMTREGGLPAANIVRVPSEVPAGDGPFPVAPAAANLAYVMYTSGSTGVPKGVAVTHGNVVGFCLDGAWPAEVTERVMVQANHAFDASTYEVWVPLLRGGTVVVAPAGDLDAADRERFIAAHRITNVHATAGLFAALGEQTPHIFAGVREVSTGGDVVSAAAVRTLLETHPDMVVRSTYGPTETTAFATHLPFTAGDQVPASVPIGRPLDNTRIYVLDGFLQPIPPGVGGELYVAGGGLARGYLNRPGLTSERFVACPFGTPGERMYRTGDLARWTGDGLLVFLGRADTQVKIRGFRIELSEIENVLSGCPGVARVAVVAHTSQADHSQLVAYVVPAEGESVTGSAVRRYAAGRLPDYMVPAAVVPLAELPLTGNAKLDRAALPAPDFGRMATGREPRTPIEEVLCSLFVDVLKLEWIGADDNFFELGGDSLLAMRLLARVRAVLDVEVGIRTLFTGATPAAVARVVEAGGRSRPELVAGVRPDPAPLSFGQARMWFLNQLEEGRAVYNVPLALKLTGQLDRWALQAALADVAARHESLRTVFPDVDGVPGQHLLDETVGRPELVMVAVTEAELPSLMAAELGRGFDVGSEPPLRVRLFTLSPREHVLLLVAHHIASDGWSMGVLARDLSVAYTARLRGRVPQWTRLPLQYADYAVWQRAVLGDLSDPASLISEQLAYWREALADIPAELALPVDRPRPPVPSFTGGAVPIRIGAQTHERLVRLARGRRATLFMVVQAAVALLLSRLGGGNDIPIGTAVAGRGEAALDDLIGFFVNTLVLRTDVGGDPSFNDLVARVRERNLAAYAHQDVPFERLVEELYPARSLSRHPLFQVSLGLRNTPQDTGWELPGLTIQPHRSGVNAAKFDLSFSLAEHRGADGEPAGIGGTVGYAADLFDRPTVQKVAERLVAVLDAVAADPALRVSQVPVLGAAEWVRVVEEWNDTGVGVGVGTLPGVFGGWVAAGRDVVAVVSGGVRVTYGELEVAANRVARDLVAAGVRSGDRVGVVMERSVELVAVLVGVVKVGAAYVPVDVEWPVVRVGRVLAEAGVRVVVADVGVSDLPGSVGVVWAGGWVDGEGECGPPAVRVGADDVAYVMYTSGSTGVPKGVAVTHAGVVGLAADRCWSREVHGRVLFHASHAFDASTWELWVALLSGGQVVVAPAGRVDAGVLKGLISDFGPTVVHVTAGLFAAVAEEAPGCFVGVREVVTGGDVVSAAAVVRVVEACPGVVVRQLYGPTEVTVCATVFEVRPGDEVASVVPIGRPMDNTRVFVLDRFLQPVPPGVTGELYVAGVGLARGYFGRPGLTGERFVACPFSGSGERMYRTGDLGRWTGEGQLVFAGRVDGQVKVRGFRIELGEVEAVLGLYPGVGRCVVVVREDEPGQKRLVAYVVASEGEALDTVQIRDFVAGLLPEYMVPAVVVVLSGLPLTGQGKVDRGALPVPDFAGRVGGRSPRTAVEEVLCGLFAEVLRLERVGVEDSFFDLGGDSIMSMQLVARARRAGVVVSAQDVFEYKTPAGLAVVAQSSLAEVVPADVGIGEVPLTPAMCGLVRRAGVAGLDRFSQAMLVVVPAGIDLERLGVAVNALVDHHDVLRARLVCPDERDSATWKLDVPPAGEGAGGLVRRVDAVGLAEAPLTELIKVQQRAAAGRLDPVSGVMVQVVWLDRGVGVSGRLLLVVHHLVVDGVSWRILLPDLAAAYAACVAGGGVELEPVGTAFRRWALLARAQAQDPVRVAELPVWQRILTGDDVLLGDRPLDPARDVASSMRQLSFSVSLEVTAALLTTVPTLFHAGINDVLLAGLAAAVTEWRRRRGDGASEAIVIDLEGHGREPLAEDVELSRTVGWFTRVHPVRLELPDVDLADLRAGGPAAGRIIKEVKEQVRAVPGEGLGYGLLRHLNPATRPVLAALPTPQIAFNYLGRFAGARRTGEDTDWQPIGLDGEAGDLPAAHVLEAGGAVRDGADGPELTVSLAWPPGVLAEPAVRELGEGWVAMLTGLAEHAARPEAGGHTPSDFPLLELGQRQVEQFEAMAAEIEKGTSS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_8

3232705-3232791

Orphan

Consensus_repeat	Method
CGCCGGGCGGATGGTCGCGCCGGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007777_8

>merge|NC_007777|8|3232705-3232791|CRISPRCasFinder
CGCCGGGCGGATGGTCGCGCCGGGCGGATGGTCACGCCGGGCGGACGGGGCCGACAGTCACGCCGGGCGGATGGTCACGCCGGGCGG

>NC_007777|8|7|3232705-3232791|CRISPRCasFinder
CGCCGGGCGGATGGTCGCGCCGGGCGG	ATGGTCACGCCGGGCGGACGGGGCCGACAGTCA
CGCCGGGCGGATGGTCACGCCGGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_011437132.1\|3230988_3231393_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437126.1\|3224903_3225332_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184038
NC_007777.1\|WP_108913277.1\|3238639_3238762_-\|SHOCT-domain-containing-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437131.1\|3230034_3230712_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NC_007777.1\|WP_011437139.1\|3240331_3240871_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273167
NC_007777.1\|WP_011437140.1\|3240931_3241483_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437135.1\|3233965_3235897_-\|DUF2156-domain-containing-protein	unknown	unknown	gnl\|CDD\|235095
NC_007777.1\|WP_011437137.1\|3237976_3238609_-\|GAP-family-protein	unknown	unknown	gnl\|CDD\|378566
NC_007777.1\|WP_049760933.1\|3222961_3223276_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_007777.1\|WP_011437138.1\|3239400_3240342_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NC_007777.1\|WP_108913771.1\|3236919_3237723_-\|ribonuclease-BN	unknown	unknown	gnl\|CDD\|377085
NC_007777.1\|WP_011437142.1\|3242444_3243941_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NC_007777.1\|WP_011437128.1\|3225809_3226445_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437129.1\|3226441_3228724_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437143.1\|3244402_3244825_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NC_007777.1\|WP_157858561.1\|3241987_3242356_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NC_007777.1\|WP_049760935.1\|3231648_3232512_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437130.1\|3228716_3229841_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437123.1\|3222649_3222922_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NC_007777.1\|WP_011437125.1\|3223275_3224532_+\|HipA-domain-containing-protein	unknown	unknown	gnl\|CDD\|377920

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_108913771.1\|3236919_3237723_-\|ribonuclease-BN	gnl\|CDD\|377085	pfam03631, Virul_fac_BrkB, Virulence factor BrkB. This family acts as a virulence factor. In Bordetella pertussis, BrkB is essential for resistance to complement-dependent killing by serum. This family was originally predicted to be ribonuclease BN, but this prediction has since been shown to be incorrect.	0.00923839
NC_007777.1\|WP_011437126.1\|3224903_3225332_-\|hypothetical-protein	gnl\|CDD\|184038	PRK13410, PRK13410, molecular chaperone DnaK; Provisional.	0.00965732
NC_007777.1\|WP_011437123.1\|3222649_3222922_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	9.59043e-10
NC_007777.1\|WP_011437139.1\|3240331_3240871_+\|hypothetical-protein	gnl\|CDD\|273167	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0.000343479
NC_007777.1\|WP_011437135.1\|3233965_3235897_-\|DUF2156-domain-containing-protein	gnl\|CDD\|235095	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX.	6.81427e-176
NC_007777.1\|WP_011437137.1\|3237976_3238609_-\|GAP-family-protein	gnl\|CDD\|378566	pfam11139, SfLAP, Sap, sulfolipid-1-addressing protein. SAP is a transmembrane transport protein with six predicted transmembrane helices, with a hydrophilic domain between helices 3 and 4. This hyrodphobic region is highly variable among identified Gap-like (GPL, peptidoglycolipid, addressing protein) proteins and may be involved in substrate recognition. SAP also belongs to the LysE protein superfamily (pfam01810), whose members have been implicated in small molecule transport in bacteria. Other Gap proteins export metabolites across the cell membrane so it is possible that Sap specifically may be involved in transport of sulfolipid-1 across the membrane.	2.79303e-33
NC_007777.1\|WP_049760933.1\|3222961_3223276_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.07378e-07
NC_007777.1\|WP_011437138.1\|3239400_3240342_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.66732e-37
NC_007777.1\|WP_011437142.1\|3242444_3243941_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	6.41878e-53
NC_007777.1\|WP_011437143.1\|3244402_3244825_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.14214e-19
NC_007777.1\|WP_157858561.1\|3241987_3242356_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.89827e-30
NC_007777.1\|WP_011437131.1\|3230034_3230712_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.24383e-18
NC_007777.1\|WP_011437125.1\|3223275_3224532_+\|HipA-domain-containing-protein	gnl\|CDD\|377920	pfam07804, HipA_C, HipA-like C-terminal domain. The members of this family are similar to a region close to the C-terminus of the HipA protein expressed by various bacterial species. This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis. When expressed alone, it is toxic to bacterial cells, but it is usually tightly associated with HipB, and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products.	8.33607e-54

>NC_007777.1|WP_049760935.1|3231648_3232512_-|hypothetical-protein
MTVRTPAPAGGDDGTARGDDGPAGAEHVHGAEGAASPWSGRPWSVVWRLPVTDSLLGALVAARVFQYVDPATATRWQWAMSTTFDQMRHHPLGVLVGSIPWLPEGPLAPWLMFAGLAVGGLEATAGGATALAVVLGGHAGATLISQGVLDLRVVTGGLPRTALHVLDVGPSYVVATALTALVVLPSRRSLRALASLTFVVVLPVMMKGVSRGELDAVGHTAALALGALAGLAPPVRRRAAARRDTARRGWWDVGGNRRAKSGHKARFGVRRYRWIRGRRESGLDLHF
>NC_007777.1|WP_011437132.1|3230988_3231393_-|hypothetical-protein
MASVIDGIYRISIAGQQTLTDVGGGNLVLLPDGNGGGQVWQVRRANDDTYTIRKPSGGAFVSFDGDPDTFERVRVLPEPREWKIADGPQSGTFTIGVPDNELTLGLHPALIYPPLVALSPIFREDRGWIFEGVE
>NC_007777.1|WP_011437131.1|3230034_3230712_-|Crp/Fnr-family-transcriptional-regulator
MTNSVRPARRGMQAILGDRLWQALLSCGSRCHFRSRQVLLRQGDPDDFLLLLTTGRVKVVRVDAEGSALLLALRSPGDMIGEMARIGTGRTATVQAIDRCEAHRVSAATLDSFLRRHGVQGALADYVVSKLSETVPYQHQLVHFSPRQRVARLLLELVALAGPELPDPMRVPFSLDAVAESLGLARSTVAAHVAALREEQVLRPGPRLAVADISRLRAEVGITTG
>NC_007777.1|WP_011437130.1|3228716_3229841_-|hypothetical-protein
MASTPVHGGTDSMAMPPYRALLVVDIKDFSGYPGRWHEDMTRAVPDILTGAFARSGWSESPSMERFSDTTGDGYVLGFEPSMLPLLVHPFLDNLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRLGDGSGAARIALHRQLDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSGLDDSLFVKAPVEVKTYRDEAYLYVPRPSGGLLHRGFRVPEVPAAPSRAAAEASTPSDRSRADLGQSGATRNISGIRNIGGISNVGGSVFGDNRPQTHVGIGDINTASGPIRTTRRDTHAPRGDQQIGPRTEHHGPEHYGQGHQFAAPLDRPNFGDSNFTQGSPTTAPDPGAVDEKGTSGVEGAHDD
>NC_007777.1|WP_011437129.1|3226441_3228724_-|hypothetical-protein
MTDIRSLMPGASPADETLPHEPPGNVPPDEKAAGAGAAAAAEPPGAGNTGNVSGAGKSGGAGNVGGSVSGDNRAQTHLGNGDIKNIVNLIDLAKKRVRRPEAISGATLRELSGVFVRPTGFADAAEKIEKHRLVLLSGSPGDGIHAAAWMLVAGAGGARAGTERIERIPADVEADDEPDIPQKALDDQARYLLDLSELMPSRSEELAKRLEALRDVVAGSARYLAVILPADSVRWLPAELRRLVPEMSRPDWRAVLQSHLAVSMQPSAQPDLATIVKIIEKSADLADLGAATLYQVSRVAVASAKLLGMRPGAALPDCLRLAWREVKRQDSDYGKEIDCLLENDRTGMNALLLITAAMLEDADRDLVFVAQRELARAGEFRLPDDHALTRPGFLARLGEIGVVRDEQRPIRFEKTGFGVAARHYAWDNYPTLRPAFLDWAERLPSPPGIFWPNDVLTRFAERFTEESLRSDRADDALDLAYHWIGRRRVAAIPACLGLLTKGLEEGAEGTGGRKFRQRIRAWSEDHRLDAYLARMCIELSGKIIYDIYPFQALTRLHNFAAHENPQVASAAIDAVETLASADRDNYRYVLGRSVRAPYAVRGSTGNAEVFLRLVSASRLYARDAVGWRPVDDPECGELFRGGWILVLEADAPPSKETIGLVHLWLDDVVQAVGRGPTILPDLLVDALRERFDLLSSLRAILGRWVDRPLGDPMAPDQAAVRTYLLDRIDKELFGEDVGLRPPSSPGDTQPSPAAGREEQR
>NC_007777.1|WP_011437128.1|3225809_3226445_-|hypothetical-protein
MTRSQWVVFVMNLFGLLATPLLLGWIVGGPLLIWVVLALALTGVTVVQAWPVRGILDAEKAPPSPVVVPTMAMTPVPVLSDEYQRELERRRDLAQVFSAADSAAVWHLARGDADIEATGRAMPVLDYLVSVISPKAESRLPRPRKWEHTVDDDMTFEKHAEAIIQAVLPDPADGRRGDLAAQLGIVLDRWNTSGEFGKLLKQLYPASQAIL
>NC_007777.1|WP_011437126.1|3224903_3225332_-|hypothetical-protein
MDKSVRRKAAVVAVSTAAAVFVTVGPAATSALASSYLGGPVDEKIAKDHWGKDGWDGWDGKDRWDGKDGWDGWNGKDGWDGWNGKDGWDGKDRWDGKDGKDRWDGKDGKDRWDGKDGKDRWDGKDGKDRRHKDDWDWDWDWD
>NC_007777.1|WP_011437125.1|3223275_3224532_+|HipA-domain-containing-protein
MAGRDPVEVTVEIDGQETAAGTLWLHNRGGQSATFRYADAYLTNPAGYDLDPALARAAGVFHTPAGSAIFNAFADSAPDRWGENLMRREERERARAAETTPRTLGKADFLLGVRDDTRQGGVRFRQPATATYYSTHRHAVPRLIDLARLMRAADRVRAEGDFDRDLADLIDAGSSLGGARPKAAVRDVSGRLSIAKFPRSDSDEWDVAGWEEVQLRLARRAGLTVAESELLTVTGRHVLLLSRFDRIGARRLGFASALTMLEASDGDLRSYLEIAEVIERYSPRADADLRELYRRILFSILTGNTDDHLRNHAFLRERDGWALSPAYDLNPNPDNPARLSTAVDLDNTDASIDLALSVGNYFRLSPPRARDLVREVETATAGWRQAAAGLGIPKSQADRMAAAYESEQRRIARALRVP
>NC_007777.1|WP_049760933.1|3222961_3223276_+|helix-turn-helix-transcriptional-regulator
MVGDRASHATPLSVARSLRLLGEHVSTWRKLNRLTAAQVAQRAGISRDTLRAIEQGKGTASTENLFRVLRTIGIMDAVVRATDPYETDVGRLRMDEILPKRVRR
>NC_007777.1|WP_011437123.1|3222649_3222922_+|transposase
MGATRRGFTEEYKEQAVAFVIDGSRPVAEVARNIGVHEMTLGKWVKKAKDVESGDRHWLRRLGWARDLPVMTVFAPACPTWSATTRRSRT
>NC_007777.1|WP_011437135.1|3233965_3235897_-|DUF2156-domain-containing-protein
MPVLPPWKQPWAPRIAALLALVVGLVDVISAVTPEWRSRLEDLRVLLPPAASQQAAAFTVVVGMLLVLLTPGLRRRKRRAWRAVVVLLGVSIVLHVAKGLDYEEAAGSAALLIALLLVHGEFRAKGDPSTRWRALGVGLLLTVVSIGIGFLLLYVRQDRIVGPHSLSAQFEQIVEGLVGIPGPLRFTSDRFSGLAARVLLTMGLLTIVTTGYLALRPPEPRPRLTDSDEERIRALLARHGKADSLGYFALRSDKSVIWSPTGKACVAYRVVSGVMLASGDPLGDREAWPGAIREFLREAADHAWTPAVLGCSEAGGFAWTRAGLCALEFGDEAIVDTASFTLEGRAMRNVRQAVARVERAGYTAVARRVGDLAPADIARLKAQAAAWRGTQTERGFSMALGRLGGGADGDCVAVMAFSHDAGPHDAGPHDADDPVNGAPGHPANDTTSGIEDGTSHADAAGTEPRLRALLHFVPWGPNGLSLDAMTRDRTADNGLNEFLIVSALRQARELGVERLSLNFAFFRSALERGERLGAGPVIRCWRSLLIFLSRWFQIDSLYRFNAKFQPTWQPRYICYPASSELPRIALAMLEAEAFLVWPCWRDHLSGLSRLSRLSRLSRLPRPGTAGLHHRARRKDTSTGPGPD
>NC_007777.1|WP_108913771.1|3236919_3237723_-|ribonuclease-BN
MASRLREADLINRAMNLAAMILMIFFPFVITLAALSPLRQGGAADIIIARMGLSHDAAMAVERLFTPRSGTVLTGWTVLGVLWLIIGGLSLAASVQSIYVRVFRLKPFGLRGLLAQVGWLCGLIFFLVATTSLGALLTGTVAGQVCYGLVATVILALFLWVGVRVLTIGRMSWRDSWPTALFTTIGLTGLGVVSRLAFSASIVANERSYGGIGVVFTILSWLIGFGVVLIGGVIVGTWYLDTELSVAGILRKFHIGRRTGRDQARKS
>NC_007777.1|WP_011437137.1|3237976_3238609_-|GAP-family-protein
MDGLQILPLAITMMIGPQIMSAIIFVTTPRAGRVSLGFLAGVAAATAAGVAVMMGLAALLDSAVDLGSSRSNGSAGQIIQYVLVGLLAVAAVKNWVRRETVEPPKWLTTLMAADLMKAFQVGLFVILLMPSDIVIMMTVGIHLQQNNASYAAALPFIGLTVTVAALPLLARLLFHRRAEVAAPRVRDWMNTHSWLINIIVCIIFIALIID
>NC_007777.1|WP_108913277.1|3238639_3238762_-|SHOCT-domain-containing-protein
MRAATRATIIADELAKLGDLHRRGLLNDQEFERERARSLA
>NC_007777.1|WP_011437138.1|3239400_3240342_+|ParA-family-protein
MKVVSVMNYKGGVGKTTLTANIGAEIARWGKRVLLIDLDPQASLTFSFYRPEDWRAHLAEGRTIKQWFEAWRMDGPVPGLEVLVTAPTVANSRIAHNGGRLDLIASHLALGDVEMDLAARLGGAQIHRSTRHYFDVYLRLAAGLATLPGRLYDLVLIDCPPNFGVITRSAVAASDQLLIPARPDELSTLGIDHLQSRLRRFTWEFNQVADLQADLRPAVKKLEPMILGVVFTMVQYYGGQPVSALRPYIAQTRSLGLPVFDAMLRESNKHFAGAARAQLPAILTEQLSRELAWELQSLVEEFLKRIRTANHGS
>NC_007777.1|WP_011437139.1|3240331_3240871_+|hypothetical-protein
MAPDSRPASHPGRDAARLGAVLLRQVSDLLDTLDVRQLDDLVAGRARLAVVPTPTAAPTPTAAPTPTAAPTPTAAPTPTATAADPGGRAAADGSRLPASVDVEKLHATLVAAASREEAREHLAALGRIPVPQLRALAGALGVDGVGGRDPKATVIRKIVDGTIGFRLSSRAMLAGESEL
>NC_007777.1|WP_011437140.1|3240931_3241483_-|hypothetical-protein
MAAPRRRSSSGSGRTSARRRQPTRSRRAASRTRSRRERKHVHLACYLAFGAAGLWLTLRGTWIALPVALLVITVMLGFRWPTLCRAYRTDDGICETPVNGWLTGCASHAPFKRRDLRAVAWPPNRVSPFHPIVLALRIPPREPEAQPDLDGAPRRVTMRNLVTSLVLAVAVLMTGFGLLLGAA
>NC_007777.1|WP_157858561.1|3241987_3242356_-|helix-turn-helix-transcriptional-regulator
MLDQHDESDCPAARALGLIGDHWSLLIIREAFGGARRYDDFRTRLKISDHTLTRRLDRLVDRGILQRRLYQPRPPRSEYELTSAGRDLAPILMELGRWGSRWTTGAGPDRSLPASLLRAMDE
>NC_007777.1|WP_011437142.1|3242444_3243941_+|MFS-transporter
MSRSAQPKESAASPLLLPVVCLGQFLVVFSLSSVNVALPSLAADLQMSRETQPYTVTAYGIALGSLLLLGGRAGDLLGRRRLFRLGTGVFAVGTVVCTLANVTGVLLAGRALEGLGAAMLAPAALGTINAIYPQGPSRNKALGVFGAVSSAAAGVGVLAGGVLTDGPGWRWAFAIKIPFCLLLLAVVGRIMPETRDTRSHHGFDIAGALTATGSMFSLVVAITQAEQRGFTSPAILALFGSAAVLLIAFIVIESRSDDPLMPLALFRRRGLSVANGATLLVWASFGSAFLLVALYVQQVLGYSPMKAGLTFVPMATAAALAANVAQATASRSARGPKPALLVGLVLLTVGVALLSRGDADTRYTAVLLPALVLCGAGLATSLTALNVAAFSGSNSDDSGVEAGLLSTSQEIGAALGVSILSTVSARVISDHLAAHPGDPTAMLSGTVDAFQVSFVVAAGMAAGAFLLSLIALSTRVDIPPASVSENPLAEPASIMPSR
>NC_007777.1|WP_011437143.1|3244402_3244825_+|rhodanese-like-domain-containing-protein
MVVLDQRLLESCRRYVDDMPPRFNYMTSPELAKALESHPDAYFVLDNRTPEAYAAGHIPGAVNMWFKDVLSDSNLALLPRDKTIVIVCWVGHTASQLVALLGLLGFTVAGLQYGMGESPVPDSPRAGWRDLGLPLEKKIG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_9

3904716-3905896

Orphan

Consensus_repeat	Method
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CRISPRCasFinder
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CRT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	PILER-CR

15 spacers

The CRISPR arrays of NC_007777_9

>merge|NC_007777|9|3904716-3905896|CRISPRCasFinder,CRT,PILER-CR
CTTGGGAACCTCGCCGGGCGCGGGCGCCCGGCGCTGCTTCTGGGTCGCGATATGGTGCCTTATCGTGACTCAGTTGTGATCCTCGGCGCTGCCCTCGCGGCAGATCCAGCCCAGTTCGCGCATCTTCGCGTTGCGATCCTCGCCGAGGGCGGTCCCTCGGCGCTGCTGGTGGGCGAGGTGGGCCTGCGCCAGCGTCAGGTTGTTGTGATCCTCGCCGAGGGCGGTCCCTCGGCGCTGCGACGACCTGGTGCTGATCTGCACCAACGGCACCGCCGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCCGTCCGCCGCGACAGCAAAGACCTACACGCCACCCACCGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCGTGTCCGCCTCCCGTGAGCTGCTCGTCCGCTGGTTGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCCTGGGACACGGCCCGGATCCTCGCCGAGCGCAACGCCGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCGATGGTGACGACCTGGTGCTGATCTGCACCAACGGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCTCGATGGTGCCGTCGGGCTGGTCAACGCCTTGGATGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCAAGTGCTCGAACATGTCGTCGACTGCATCCGGGTGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCCCCCGGCCGGCGCTCACCGTCGCCGCCTGGTCCTATGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCTCGCGAACACCAGCTGGTTGGAGCCACGCGGGTAGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCTGCGCCCCCGCTATCTGGTCCCGCTTTTCCTCGGGAGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCGACCGCTGCTTGAGCCGACCGGTCACAATGACCCGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCCCGCTCCGGCCTGGATCGCCAGATGTCCGCCCTTGCGGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGCCTGTAGGGGCACGTTGTAATGCTTTCCGGCCCGGAGGTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC

>NC_007777|9|8|3904716-3905896|CRISPRCasFinder
CTTGGGAACCTCGCCGGGCGCGGGCGCCCGGCGCTGC	TTCTGGGTCGCGATATGGTGCCTTATCGTGACTCAGTTGTGATCCTCGGCGCTGCCCTCGCGGCAGATCCAGCCCAGTTCGCGCATCTTCGC
GTTGCGATCCTCGCCGAGGGCGGTCCCTCGGCGCTGC	TGGTGGGCGAGGTGGGCCTGCGCCAGCGTCAGGTT
GTTGTGATCCTCGCCGAGGGCGGTCCCTCGGCGCTGC	GACGACCTGGTGCTGATCTGCACCAACGGCACCGCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CGTCCGCCGCGACAGCAAAGACCTACACGCCACCCACC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GTGTCCGCCTCCCGTGAGCTGCTCGTCCGCTGGTT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CTGGGACACGGCCCGGATCCTCGCCGAGCGCAACGCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GATGGTGACGACCTGGTGCTGATCTGCACCAACG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TCGATGGTGCCGTCGGGCTGGTCAACGCCTTGGAT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	AAGTGCTCGAACATGTCGTCGACTGCATCCGGGT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CCCCGGCCGGCGCTCACCGTCGCCGCCTGGTCCTAT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TCGCGAACACCAGCTGGTTGGAGCCACGCGGGTA
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TGCGCCCCCGCTATCTGGTCCCGCTTTTCCTCGGGA
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GACCGCTGCTTGAGCCGACCGGTCACAATGACCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CCGCTCCGGCCTGGATCGCCAGATGTCCGCCCTTGCG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CTGTAGGGGCACGTTGTAATGCTTTCCGGCCCGGAG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC

>NC_007777|9|2|3904771-3905896|CRT
TGCCTTATCGTGACTCAGTTGTGATCCTCGGCGCTGC	CCTCGCGGCAGATCCAGCCCAGTTCGCGCATCTTCGC
GTTGCGATCCTCGCCGAGGGCGGTCCCTCGGCGCTGC	TGGTGGGCGAGGTGGGCCTGCGCCAGCGTCAGGTT
GTTGTGATCCTCGCCGAGGGCGGTCCCTCGGCGCTGC	GACGACCTGGTGCTGATCTGCACCAACGGCACCGCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CGTCCGCCGCGACAGCAAAGACCTACACGCCACCCACC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GTGTCCGCCTCCCGTGAGCTGCTCGTCCGCTGGTT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CTGGGACACGGCCCGGATCCTCGCCGAGCGCAACGCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GATGGTGACGACCTGGTGCTGATCTGCACCAACG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TCGATGGTGCCGTCGGGCTGGTCAACGCCTTGGAT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	AAGTGCTCGAACATGTCGTCGACTGCATCCGGGT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CCCCGGCCGGCGCTCACCGTCGCCGCCTGGTCCTAT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TCGCGAACACCAGCTGGTTGGAGCCACGCGGGTA
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TGCGCCCCCGCTATCTGGTCCCGCTTTTCCTCGGGA
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GACCGCTGCTTGAGCCGACCGGTCACAATGACCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CCGCTCCGGCCTGGATCGCCAGATGTCCGCCCTTGCG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CTGTAGGGGCACGTTGTAATGCTTTCCGGCCCGGAG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC

>NC_007777|9|3|3904845-3905896|PILER-CR
GTTGCGATCCTCGCCGAGGGCGGTCCCTCGGCGCTGC	TGGTGGGCGAGGTGGGCCTGCGCCAGCGTCAGGTT
GTTGTGATCCTCGCCGAGGGCGGTCCCTCGGCGCTGC	GACGACCTGGTGCTGATCTGCACCAACGGCACCGCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CGTCCGCCGCGACAGCAAAGACCTACACGCCACCCACC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GTGTCCGCCTCCCGTGAGCTGCTCGTCCGCTGGTT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CTGGGACACGGCCCGGATCCTCGCCGAGCGCAACGCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GATGGTGACGACCTGGTGCTGATCTGCACCAACG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TCGATGGTGCCGTCGGGCTGGTCAACGCCTTGGAT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	AAGTGCTCGAACATGTCGTCGACTGCATCCGGGT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CCCCGGCCGGCGCTCACCGTCGCCGCCTGGTCCTAT
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TCGCGAACACCAGCTGGTTGGAGCCACGCGGGTA
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	TGCGCCCCCGCTATCTGGTCCCGCTTTTCCTCGGGA
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	GACCGCTGCTTGAGCCGACCGGTCACAATGACCC
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CCGCTCCGGCCTGGATCGCCAGATGTCCGCCCTTGCG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC	CTGTAGGGGCACGTTGTAATGCTTTCCGGCCCGGAG
GTTGTGATCCTCGCCGAGGGCGATCCCTCGGCGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_035958678.1\|3896184_3896937_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_007777.1\|WP_011437683.1\|3906198_3907908_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_167534317.1\|3911745_3913287_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437690.1\|3916362_3917253_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437671.1\|3893946_3895608_-\|potassium-transporting-ATPase-subunit-KdpA	unknown	unknown	gnl\|CDD\|235494
NC_007777.1\|WP_193359371.1\|3910747_3911617_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NC_007777.1\|WP_011437677.1\|3899961_3900321_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NC_007777.1\|WP_035958673.1\|3910382_3910751_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_049761108.1\|3913298_3914297_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437691.1\|3917674_3918844_+\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|273595
NC_007777.1\|WP_023840421.1\|3895608_3895698_-\|K(+)-transporting-ATPase-subunit-F	unknown	unknown	unknown
NC_007777.1\|WP_035958674.1\|3908607_3910386_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437678.1\|3900464_3900860_+\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|367503
NC_007777.1\|WP_035958672.1\|3917218_3917410_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_049761109.1\|3914293_3916333_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|378923
NC_007777.1\|WP_011437676.1\|3899156_3899564_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350248
NC_007777.1\|WP_011437673.1\|3897033_3897885_-\|DUF72-domain-containing-protein	unknown	unknown	gnl\|CDD\|376655
NC_007777.1\|WP_011437679.1\|3900856_3901765_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NC_007777.1\|WP_035733247.1\|3898923_3899160_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|198034
NC_007777.1\|WP_011437680.1\|3902287_3903724_+\|putative-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225420

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_035958678.1\|3896184_3896937_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.76001e-70
NC_007777.1\|WP_011437671.1\|3893946_3895608_-\|potassium-transporting-ATPase-subunit-KdpA	gnl\|CDD\|235494	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional.	0
NC_007777.1\|WP_193359371.1\|3910747_3911617_-\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00603991
NC_007777.1\|WP_011437677.1\|3899961_3900321_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	5.17859e-37
NC_007777.1\|WP_011437691.1\|3917674_3918844_+\|toprim-domain-containing-protein	gnl\|CDD\|273595	TIGR01391, DNA_primase, DNA primase, catalytic core. Members of this family are DNA primase, a ubiquitous bacteria protein. Most members of this family contain nearly two hundred additional residues C-terminal to the region represented here, but conservation between species is poor and the C-terminal region was not included in the seed alignment. This protein contains a CHC2 zinc finger (pfam01807) and a Toprim domain (pfam01751). [DNA metabolism, DNA replication, recombination, and repair].	2.29453e-23
NC_007777.1\|WP_011437678.1\|3900464_3900860_+\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|367503	pfam03446, NAD_binding_2, NAD binding domain of 6-phosphogluconate dehydrogenase. The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold.	3.6045e-12
NC_007777.1\|WP_049761109.1\|3914293_3916333_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|378923	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG. This family includes both TraG and TraD as well as VirD4 proteins. TraG is essential for DNA transfer in bacterial conjugation. These proteins are thought to mediate interactions between the DNA-processing (Dtr) and the mating pair formation (Mpf) systems. This domain interacts with the relaxosome component TraM via the latter's tetramerisation domain. TraD is a hexameric ring ATPase that forms the cytoplasmic face of the conjugative pore.	6.69216e-28
NC_007777.1\|WP_011437676.1\|3899156_3899564_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350248	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins. This subfamily includes Mycobacterium tuberculosis VapC27 and VapC40. It belongs to the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.17096e-42
NC_007777.1\|WP_011437673.1\|3897033_3897885_-\|DUF72-domain-containing-protein	gnl\|CDD\|376655	pfam01904, DUF72, Protein of unknown function DUF72. The function of this family is unknown.	8.75179e-65
NC_007777.1\|WP_011437679.1\|3900856_3901765_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	1.64299e-30
NC_007777.1\|WP_035733247.1\|3898923_3899160_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	7.01224e-06
NC_007777.1\|WP_011437680.1\|3902287_3903724_+\|putative-DNA-binding-domain-containing-protein	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	1.79101e-46

>NC_007777.1|WP_011437680.1|3902287_3903724_+|putative-DNA-binding-domain-containing-protein
MSQTIAFLRAAGGDTTEVEVKSAAGGLPASLTSTLSALANQPGGGTIILGLDERAGFRPVELSDPQVLKQGLAARARAFTPPVRLTIEDGEVDGAAVVVAQVQECDRSTKPCRVTATGRAYLRGYDGDYALSDVEEQGFLAARQPPLFDRSPVEDATIDELDTELVDAFLLAVRERDPAGLGRFPDDTELLRRAGVTMDGGQPTVAGLLALGVHPQQWFPRYVIQAAAQPLPTGSAATRARNQVTISGPVPRMLDAALLWARHTFDTAIVAEMDGSVRDRPIYPLVAFRELVANALIHRDLDHWSAGLAVEVRLLRDRLVVTNPGGLYGITVDRLGRDAVTSARNASLVAICQHVRSAQTGARVIEALASGIPTVTEALADCGLPSAHYVDSGIRFTVILHQFATATPVATAEPPLGATERRVYQALTRQGRTVSDLAEELGLSAPNIRKALRNLRGRGLILQLGGRGRATTYQRTDS
>NC_007777.1|WP_011437679.1|3900856_3901765_+|NAD(P)-dependent-oxidoreductase
MSGEGGLSPGTVVGLGPMGRAMAASLLRSGHPVTVWNRTEGRADDLIVRGATLAPTATAAVAASELTILSLTDYQAMYDILDPVAESSRPSAVLAGKVLVNLSSDTPDASRDAAGWAARHGASFVTGGVMVPAPAVGGPGAHVFYSGPRAVFDIHEPTLRLIGEPRYLGEDPGLAQLFYQAHLDVFLTALSSLLHATALVTAAGVPAADFLPGALNTLTDIPTMIGDGWDLARRLEAGEHPGDLSTARMMGATANHIVWTSEKAGIDTQLPKAVKAHYDQAVTAGRGTENWTVLYEMLKGCD
>NC_007777.1|WP_011437678.1|3900464_3900860_+|NAD(P)-binding-domain-containing-protein
MTTCTTFLGLGAMGSALAAATLDAGRPTVVWNHTPGRARALGDRGATVAETVEEAIIGGGVVVACLLDHRSVHSVVEFTEAALESLVTASLDQGVNVEVLRPVHDIVRRQITAGYGQQGTARIFEELRSSR
>NC_007777.1|WP_011437677.1|3899961_3900321_-|helix-turn-helix-transcriptional-regulator
MATSARRGPYVCGIDAGMDVVSGKWKSLILWELNNHGTRRFGELRRGLPGVSEKMLIQHLREMEEDALVHREVYRQVPPRVEYSLTEHGISLNEALRPLGEWGKRRCERLAVEDALESA
>NC_007777.1|WP_011437676.1|3899156_3899564_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MTIAVDTSVAVPLLVRSHTHHADVVQWWGGRELALSGYALVETYSVLTRMPGDARLSGPDAARLLDVRFTAPLTLSGPHARKVHATLSRVGIVGGAVYDGLVALAAKEHGLALATRDARARGTYDALGVKVIVVA
>NC_007777.1|WP_035733247.1|3898923_3899160_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MEAVVDQAGRIVLPKLLREALGLFPGTKVDISPYGAGVQIVPAGRTARLVEEDGVLVSAGDTPVDDDILFGLIDAGRR
>NC_007777.1|WP_011437673.1|3897033_3897885_-|DUF72-domain-containing-protein
MRLHVGCAMWAHKSWQGRFLAHPLPPHERLRNYASWCNAVEGNATFYATPARSAVASWAQQTDADFRFVIKLPKTITHERRLTGVDEALHAFLEAIEPLGPRAHALWIQLPGSFTPADVPVLARFLRRLTRSHRYAVEVRHPAFFNDPRAARLLEGVLAAATAEWIPFDTTTFFQSPPGSDAEREAWTRKPRVPLRSLALTDRPIVRYLGRDASTQTIKGWQRWIDTAIEWLREGRSPTVFIHTPDNADALLLARCFHDDVRVRVPELDALPQPIPTEPLTLF
>NC_007777.1|WP_035958678.1|3896184_3896937_-|response-regulator-transcription-factor
MTRLLFVEDEPQLLRAMRITLRARGFEVRTALDGRHALSEAASCPPDLVILDLGLPDMDGVEVIQGLRAWTGVPIIVLSGRASGHDKVAALDAGADDYVTKPFSIDELLARVRAVTRRATSAESVTVVDLGRYRIDLGEKRISSRDSADADADADAGSGHEDPSATGGEDKPDGPRLTPTEWRLLEALVRHPGKLVSHQQLISQVWGPGVADDSSSLRLYINKLRRKLEPDPTRPRYLTTEPGLGYRYQP
>NC_007777.1|WP_023840421.1|3895608_3895698_-|K(+)-transporting-ATPase-subunit-F
MSVENIAGLILAVALTIFLVAALLSPERF
>NC_007777.1|WP_011437671.1|3893946_3895608_-|potassium-transporting-ATPase-subunit-KdpA
MGTNAAGVIFIVSMVLALALTYRPFGDYMARVYMSGKHLRVERGIYRLVGVDPDAEQRWSVYARSVLAFSLVSVLFLYLFQRVQNHLWLALGLPAVKPDLAWNTAVSFTTNTNWQAYSGESTMGHLVQMSGLAVQNFVSAAVGIAVAIAVVRGFARKKTDQLGNFWVDLVRTVVRILLPVCALAAIVLIVGGAIQNFHGNTTVPTLAGGEQAVTGGPVASQEAIKDFGTNGGGFYNANSSHPFENPTSWTNWFEIYLLLSIGFALPRTFGKMVGSTRQGLAIVAVMAVLALGSLGANEVFQAIHHGTVPTAVGAAREATETRFGVPDSALFATGTTLTSTGSVDSFHDSYTSLGGATLLFNMMLGEVAPGGTGSGLYGILVLAVITVFVAGLMIGRTPEYLGKKIGSREIKFASLYFLTMPVIVLVGTGLAMALPGERAGMLNSGPHGLSEVLYAFTSAANNNGSAFAGITVNTDWYNTALGLAMAFGRFLPMVFVLGLAGSLAKQQPVPETAGTLPTHRPQFVGMLTGVTVIIVALTFFPALALGPLAEGLH
>NC_007777.1|WP_011437683.1|3906198_3907908_-|hypothetical-protein
MREPLTYGSLADEAARIAAAAATNPPRPGARLGEILDHAAGIGRLFATAGRHAKLLDAPFGGPGRSTTFVNRLVTAALVADQLYDQPTPGRTLWHRAADKLGAAHDLLASHVDRAGQQRSLDAVVLGDPLAVRGAMTRLTDITLPAALTARALPPLIAPFQTNAPSVIPAAQVLTRLGALTGPIRMSRERLHPTGDHALDPVGPLLGDPAAPPLDRAIHHVRRTLHQLSQPDALISQQALLAFATLALAISERTHRLTRQAATLVRGPERARLDIACEQAENTARSWHAIRTFLQQTASRGIDGHEAPGLVIDTGRYLVANTRTGKNPGRRDLARVLDVMRRTTLVLPEIAERSGLAVEVLLTHQALLGPATPTGHQTIGRNEQTWIVDAYRTATGHGGSTITHLLRLPGIHPQRARALYLVQRYAPEGDHDLLGLRDAHPATQETPRPGWHVPVLDEEPDGTLRLHDSRHGTLQIDNTTLSTAVTRSPQTLRGILADHPWIDLDGTETLVTLAALVAAHTPGALRTPAASEPADPPSQAALPTLTSQPPVASANLPHLQATEASDLDF
>NC_007777.1|WP_035958674.1|3908607_3910386_-|hypothetical-protein
MSRADDRPPGRDLPLDADSAALGRRDHGFFDDQHSPRGQRDLAHARTPWTGTRPRRVGAAAAHDRTLGLTRTPSMWPEHTPPATPLTRQDRRRRAAGIVNDLRRLPRPAPVLPTATPTLLLTALHTIARNAHRRPARRQLAAVRRIAADHRLDPDMLLGVAFGVGTLIARATPGNPPGARNGRRDGPTGRLGDGKPSLNALHDANLPLALDTYLARAHLRENAAFSDPDLPRLWMTANALTHGIPAQVILTVPATGRGPDAALHPRRTDLVGWLGIRNALGDLDAAVRTATEGRRWLARAGPARGGSDAVLLALGVLHASHPTIAAELALRGPGVLRLADLRTLAQRLPLPVHLVDLTDTALKAVCDRNGWLLGTPDERHHRELVERVLPTTVTDEIRARLARGDTTALAAALHQAAPTDSDLDARTWRWDPAADDAVQVRQLLAEASREAHARFADWHITPHPSRAVAFLARFPERSLRRALTLDPQRLHILATPPAVVAGQKTASLKPGAGPRTSTSTAPHAESAATPAHLGDGRGDPRPGPPGPVESGGGPPATRAGPDTDPAPGRPAGEPQLPPAELPAWPGPPIPGL
>NC_007777.1|WP_035958673.1|3910382_3910751_-|hypothetical-protein
MTAPQPAWDIRVLGRPVVIEVPTRIGDDPDPLLALAAVALERHLAGAPTASRIIGQLAHSGVVALRTISTVFEIREQRDGWLLVRSWGDPEPAELAAAAWIRAHRLARERADAAATLPDGLP
>NC_007777.1|WP_193359371.1|3910747_3911617_-|hypothetical-protein
MTDLAGPRLKVARLHPSGLLLDFPFAPPPGSAVYVATFWPEPAAPSGWSFAQWQRGPHHRGVQLPQIADLGDVVGFRAVTRPQLGNVPPPAVRSGVPQPPPAANVVEWWGYLHAVERGALVLHGPHPSLPAAYAAAQHALAAQVWAGEPAGTTPRGGPAGSLGVHPSRERAWREPAQPPAAVSLTWHGDTATVSDPRFGWLHVPADDLAAALTRRSDELVRALQPLIRGIDGTEPPVTLAALAALHLPDLPNIHAPTPPPGPSTPEPPAPEPSTPEPPASTGPDLDGPS
>NC_007777.1|WP_167534317.1|3911745_3913287_-|hypothetical-protein
MPEDPRSSYSYFTDPAPVRITVPTGWWRLLPTTGADGARDVTAQLVRWPGETSTPAVIVTVARLSLWELEQTLRFPFPRAVHTTFAASPRRDALVFPGPSGGWQVAHGQLLLDVGLDQDERPWRASRVDLTGREPATYGRLLHTDPPLRTWQRDLYQVDVVGAGTDDGVYGSRHDGSRHNLTYRVWLGGDVVFAGDDVMIPAGWDPRSDDAVREVIGQVIYQQWDRRELSFAQQSFLDVHRECLALESVGLPPPYPAGTRVRVDSPGGMTATGTIRRPVVRGGRTTGYLWRPDVADLPGHPGHGHPGYLLRADAAQVRATLEGKDTAVDGPDGPMIIAFGATVAAVDDPRFARGKVLRALDEEGRLAYDIQPDDDLRACHRLHADDVIPLTGTAWPTVDRLLQARDAAHVPLIAGEILVTVREIAVMPAVDPPVANALVRHGLLSPDRVLDPDTPDPISAAYPDPSGLPGVSSLPDVFTLSDAVDPDGPPPPRFPEPPSEPPDPGIGPMGMDL
>NC_007777.1|WP_049761108.1|3913298_3914297_-|hypothetical-protein
MIATAGPRQGTPRAVSVARRRERPAVVETPSGAWLVGVDPRTRLCVAAYRPAAPDAGVLFTVPARTVTAASSWELEPQIGMALGDEVHEALRLAAVTVRLDAEAEGVTVAARGADSPGPDEARVSRASDLVRVPGRGPVTYAESLACSRVLLRWEARGLEDLSDVYRLDVLALSRDIREGRRELTYRLSVNDRVMVAGNDIEVPGGIVVRSSDTVRGLMVMLTSPDPELALTAGQRDVLRRRDELMSLVAEKPGPLRPGERVEVALPDGRMLTGTVTAATRGADQDVRSYQWNPDQASLPGGFFGPHGLLRGGIVSPAPAVRATLLPDPAAG
>NC_007777.1|WP_049761109.1|3914293_3916333_-|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MPDPALLLVGVAVLAGVGGVWAGAQTAALLFGAHEPLPVGLGAAVVAVPRLVLRPGDPARAWPAEAAVLLPGPVGYWAGSVVPMAVAVLCGGVLFFLLQGRVGVARRRRMGLDPEARFARLWEIAPMWVRRPVRGRMILGRARSGIVTRLLATEDASLPVDDAVPRLLHRRVARRRGDRGAVLVVGPSRCGKTAALAVPAILEWDGPLIALSVKTDLLGATVRRRRALGQVRVFDPTGVTGELSATWSPLAESTGLAGARLAARSIANSTDWTSSGSDMSFWTTAGEDLLGLLFWVAATAGLGMDAVVGWTTSMDRDGVMRFAQAFARHDDPAIRVDGEQVLAGLSAVWKTDPKQVSSVFLVARQMIRPWQEPSVQYSAAGSEIGLDWLLGDEPDDEPDTALDPFTDNNPFTDGDPFTEDFGDAGQPGDGPRRRSNSVYLCADLDGAERLAPVLGGLVDDLIRSVYTRVGVTGKPLDPPLLVVIDEAGNWPMKNLPGRISTCAGMGIQLMLVYQSKAQIDAAYGSKADVIVSNAVTKVFFSGLSDKSTLDYAASLLGQEHVAARSLSSDIAPGGGRQGINDAPTRLELLPAHLLRQVAPGQALLLHNTLPPVHLHGRYWFRDPALLALAAGEPPPARPAAQGVRPAAPREGFGRVVRAVRVVRVRGLWNRRHRSNGTGR
>NC_007777.1|WP_011437690.1|3916362_3917253_-|hypothetical-protein
MSNDTYSDSDGERRRFVPRTAGLRRWQRDWERWSAGVEVTEGLRRWSLDPVLAAHCGSAVGLLAACGRDRAVAVAVADRRLAALIGHARAGDRAAARVVLERVMPALTVRAAERAGHADPAAMTGAGGGSAFGEVLVELVGAAWLVICTFPLDRRPRKIAANVVRDAVYRVFGYRPRMDRCTVYLDLLPEVPAGLDGRPVAGRGRGGASAELLDVLVEGRDGGVEPAHLRLLAELTLTGRSQAQVAARVGITDRGVRLRRDAAVRAVRAAVLPAAGSAPGESVAVPVPGGSAGVAA
>NC_007777.1|WP_035958672.1|3917218_3917410_-|hypothetical-protein
MAGRRDEVAMTVAMTWVMTVVMTFSMRVVAAMTWVMTVAMTWWMLPVRIVGSHVERHVFGFGW
>NC_007777.1|WP_011437691.1|3917674_3918844_+|toprim-domain-containing-protein
MPTIDRDAVLDATDLTALATEICGEPQGRGRAARWHCPNPAHPDEHPSMGIYQGHHGRWRWKCHACGDGGTAIDLLMTGTGMTVREALLDLADRAGITPAQHHTPHRPRSTAHPTPTPPAEQLTPVDPAIGTLVTAAADLLWRPIGSGARRYLHNRGLTDRLLAANRVGFDPGPRHLPRPDGLPRAGPGIVFPVLHPTDRRPVYYQLRYLNPELRRRYDQPAHDLAPNPKLAHLTTDRPAHPNLTVVCEGFPDALTAAHSGLAAVALLGTAHASPASAPTLARRLTEERPGSAFIICFDDDTAHDPGKLPAGQNAAARLADELAQHQRLVLNIQTPAGIKDLNAWWQQDPGAVHTVFRDLATLLELPHPAIGPPTDSPRPTGPALPEGP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_10

3971225-3972714

TypeI

Consensus_repeat	Method
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	PILER-CR
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CRISPRCasFinder
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CRT

20 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_007777_10

>merge|NC_007777|10|3971225-3972714|PILER-CR,CRISPRCasFinder,CRT
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACCTCGAAGCCGTCCTCGGCGGCCTCGGCGCACTGGCCGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACTGCAACACGGACAGGTTGGTGATCTGGTCGACGGAAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACAACACCGGCGGGACCATCCCAAAAAGTGATCACTTGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACTACTGGCTGCGGAACGTCGCCCCAGCCGATCTGGGGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACAACGAGAGGACGTTATGACCAGCCGTATAGATCAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACGCCCTGGAAGTCGACGAGATCGACGCTGCCGCGGCGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACCTGGTCGCCTACGTGGTGCCCGCCGAGGGGGAGAGGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACACCGGTTCGTTGACGAAATGCAGCCCGAATACGTCGCAGCGCCGGGCGTCCGCGCCCGGTGAGGTTCCCAACTGCACCGTTGACACATCCCCACTATTCGACACGGTCGAAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACGTCAACATCGCCGACGGATGGGCGCCGTCCTCGAACGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACGAGGTGTACACCACCTCAGACACTCTCGATGTCGTCGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACTCCGCGAGGAGGTCGGCGAGGGTGGTCAGGCCATCGGCGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACGCCATCCTGCTGTACGGCGTCGCGACGAAGATCGAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACACCAGCTCCTCGGCGCCGGGGATGTCCGCTGGGAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACGACAGCTCCGAGATCGGCCCGCTCGGGGACCGGCCGGGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACCCGATCTGCTGGTCGACATCGCCCCCGAGGGGGAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACACCTCGTGGCAGCAGGTCCAGGACTACGTCGAGCAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACCGCTCGACAGGTCGATCTCGTACAGGGCGCCGTCCAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACGATGGCGCACCGGCGCAGCTCGGCGTTGCGCTCGGCGAGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACTACTCCGGCACCGAGACCGCCGCGAACATCACAGGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC

>NC_007777|10|4|3971225-3972714|PILER-CR
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CTCGAAGCCGTCCTCGGCGGCCTCGGCGCACTGGCC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TGCAACACGGACAGGTTGGTGATCTGGTCGACGGAA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	AACACCGGCGGGACCATCCCAAAAAGTGATCACTT
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TACTGGCTGCGGAACGTCGCCCCAGCCGATCTGGG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	AACGAGAGGACGTTATGACCAGCCGTATAGATCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GCCCTGGAAGTCGACGAGATCGACGCTGCCGCGGC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CTGGTCGCCTACGTGGTGCCCGCCGAGGGGGAGAG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCGGTTCGTTGACGAAATGCAGCCCGAATACGTC
GCAGCGCCGGGCGTCCGCGCCCGGTGAGGTTCCCAAC	TGCACCGTTGACACATCCCCACTATTCGACACGGTCGAA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GTCAACATCGCCGACGGATGGGCGCCGTCCTCGAAC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GAGGTGTACACCACCTCAGACACTCTCGATGTCGTC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TCCGCGAGGAGGTCGGCGAGGGTGGTCAGGCCATCGGC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GCCATCCTGCTGTACGGCGTCGCGACGAAGATCGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCAGCTCCTCGGCGCCGGGGATGTCCGCTGGGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GACAGCTCCGAGATCGGCCCGCTCGGGGACCGGCCGG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CCGATCTGCTGGTCGACATCGCCCCCGAGGGGGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCTCGTGGCAGCAGGTCCAGGACTACGTCGAGCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CGCTCGACAGGTCGATCTCGTACAGGGCGCCGTCCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GATGGCGCACCGGCGCAGCTCGGCGTTGCGCTCGGCGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TACTCCGGCACCGAGACCGCCGCGAACATCACAG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC

>NC_007777|10|9|3971225-3972714|CRISPRCasFinder
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CTCGAAGCCGTCCTCGGCGGCCTCGGCGCACTGGCC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TGCAACACGGACAGGTTGGTGATCTGGTCGACGGAA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	AACACCGGCGGGACCATCCCAAAAAGTGATCACTT
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TACTGGCTGCGGAACGTCGCCCCAGCCGATCTGGG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	AACGAGAGGACGTTATGACCAGCCGTATAGATCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GCCCTGGAAGTCGACGAGATCGACGCTGCCGCGGC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CTGGTCGCCTACGTGGTGCCCGCCGAGGGGGAGAG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCGGTTCGTTGACGAAATGCAGCCCGAATACGTC
GCAGCGCCGGGCGTCCGCGCCCGGTGAGGTTCCCAAC	TGCACCGTTGACACATCCCCACTATTCGACACGGTCGAA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GTCAACATCGCCGACGGATGGGCGCCGTCCTCGAAC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GAGGTGTACACCACCTCAGACACTCTCGATGTCGTC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TCCGCGAGGAGGTCGGCGAGGGTGGTCAGGCCATCGGC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GCCATCCTGCTGTACGGCGTCGCGACGAAGATCGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCAGCTCCTCGGCGCCGGGGATGTCCGCTGGGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GACAGCTCCGAGATCGGCCCGCTCGGGGACCGGCCGG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CCGATCTGCTGGTCGACATCGCCCCCGAGGGGGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCTCGTGGCAGCAGGTCCAGGACTACGTCGAGCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CGCTCGACAGGTCGATCTCGTACAGGGCGCCGTCCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GATGGCGCACCGGCGCAGCTCGGCGTTGCGCTCGGCGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TACTCCGGCACCGAGACCGCCGCGAACATCACAG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC

>NC_007777|10|3|3971225-3972714|CRT
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CTCGAAGCCGTCCTCGGCGGCCTCGGCGCACTGGCC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TGCAACACGGACAGGTTGGTGATCTGGTCGACGGAA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	AACACCGGCGGGACCATCCCAAAAAGTGATCACTT
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TACTGGCTGCGGAACGTCGCCCCAGCCGATCTGGG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	AACGAGAGGACGTTATGACCAGCCGTATAGATCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GCCCTGGAAGTCGACGAGATCGACGCTGCCGCGGC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CTGGTCGCCTACGTGGTGCCCGCCGAGGGGGAGAG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCGGTTCGTTGACGAAATGCAGCCCGAATACGTC
GCAGCGCCGGGCGTCCGCGCCCGGTGAGGTTCCCAAC	TGCACCGTTGACACATCCCCACTATTCGACACGGTCGAA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GTCAACATCGCCGACGGATGGGCGCCGTCCTCGAAC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GAGGTGTACACCACCTCAGACACTCTCGATGTCGTC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TCCGCGAGGAGGTCGGCGAGGGTGGTCAGGCCATCGGC
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GCCATCCTGCTGTACGGCGTCGCGACGAAGATCGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCAGCTCCTCGGCGCCGGGGATGTCCGCTGGGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GACAGCTCCGAGATCGGCCCGCTCGGGGACCGGCCGG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CCGATCTGCTGGTCGACATCGCCCCCGAGGGGGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	ACCTCGTGGCAGCAGGTCCAGGACTACGTCGAGCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CGCTCGACAGGTCGATCTCGTACAGGGCGCCGTCCA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	GATGGCGCACCGGCGCAGCTCGGCGTTGCGCTCGGCGA
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TACTCCGGCACCGAGACCGCCGCGAACATCACAG
GCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_011437727.1\|3968224_3969112_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_007777.1\|WP_082456642.1\|3980136_3981585_-\|epoxide-hydrolase	unknown	unknown	gnl\|CDD\|377658
NC_007777.1\|WP_011437744.1\|3991809_3993081_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740
NC_007777.1\|WP_011437728.1\|3969108_3969774_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NC_007777.1\|WP_011437741.1\|3988031_3989669_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NC_007777.1\|WP_011437743.1\|3990507_3991809_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340846
NC_007777.1\|WP_108913811.1\|3982687_3984688_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_083494856.1\|3963363_3965589_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_007777.1\|WP_011437722.1\|3960903_3961641_+\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NC_007777.1\|WP_011437723.1\|3962522_3962765_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274852
NC_007777.1\|WP_108913880.1\|3973713_3975042_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271189
NC_007777.1\|WP_023841786.1\|3993077_3994118_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176196
NC_007777.1\|WP_011437725.1\|3965585_3966251_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
NC_007777.1\|WP_023840411.1\|3979843_3980047_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437730.1\|3970800_3971091_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_007777.1\|WP_035733244.1\|3975758_3976394_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NC_007777.1\|WP_035958778.1\|3962177_3962360_-\|AlpA-family-phage-regulatory-protein	unknown	unknown	gnl\|CDD\|225848
NC_007777.1\|WP_011437729.1\|3969766_3970801_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_007777.1\|WP_011437726.1\|3966250_3968134_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NC_007777.1\|WP_011437742.1\|3989593_3990511_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011437727.1\|3968224_3969112_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.05993e-117
NC_007777.1\|WP_082456642.1\|3980136_3981585_-\|epoxide-hydrolase	gnl\|CDD\|377658	pfam06441, EHN, Epoxide hydrolase N-terminus. This family represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (EC:3.3.2.3) comprise a group of functionally related enzymes that catalyze the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarization of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites which arise during the biotransformation of foreign compounds. This family is often found in conjunction with pfam00561.	1.47018e-39
NC_007777.1\|WP_011437744.1\|3991809_3993081_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	1.7214e-97
NC_007777.1\|WP_011437728.1\|3969108_3969774_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	2.78112e-19
NC_007777.1\|WP_011437741.1\|3988031_3989669_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	1.35928e-59
NC_007777.1\|WP_011437743.1\|3990507_3991809_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340846	cd03819, GT4_WavL-like, Vibrio cholerae WavL and similar sequences. This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.	5.06757e-72
NC_007777.1\|WP_083494856.1\|3963363_3965589_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.14326e-52
NC_007777.1\|WP_011437722.1\|3960903_3961641_+\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	2.56248e-08
NC_007777.1\|WP_011437723.1\|3962522_3962765_+\|hypothetical-protein	gnl\|CDD\|274852	TIGR03917, hypothetical_protein, Frankia-40 domain. This model describes a paralogous domain of length 40, restricted to smaller proteins of the genus Frankia, a member of the Actinobacteria. The function is unknown.	6.71025e-10
NC_007777.1\|WP_108913880.1\|3973713_3975042_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.45798e-12
NC_007777.1\|WP_011437725.1\|3965585_3966251_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	5.24041e-87
NC_007777.1\|WP_023841786.1\|3993077_3994118_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176196	cd08234, threonine_DH_like, L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.	7.07328e-72
NC_007777.1\|WP_011437730.1\|3970800_3971091_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.47559e-28
NC_007777.1\|WP_035733244.1\|3975758_3976394_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	6.23502e-23
NC_007777.1\|WP_035958778.1\|3962177_3962360_-\|AlpA-family-phage-regulatory-protein	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	0.000477267
NC_007777.1\|WP_011437729.1\|3969766_3970801_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	5.79531e-174
NC_007777.1\|WP_011437726.1\|3966250_3968134_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	1.27652e-76

>NC_007777.1|WP_011437730.1|3970800_3971091_+|CRISPR-associated-endonuclease-Cas2
MDLLVTYDVDTTTPDGNRRLRKVAKICEGHGIRVQKSVFEIVCTEPQRVLLEHKISQVIDETLDSIRIYQMPQHTLDNVHHLGAGVQPVHRADHII
>NC_007777.1|WP_011437729.1|3969766_3970801_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MAELLNTLYATTPGTSLHLDGDAVRIWHPDNDKGRRLLPLVRVDHIVVFGGVTITDDLLQRCATDRRSVTWLTGNGRFRARVEGPTGGNPHLRIAQHDHFRDDERRLTLAMSYIAGKLQNSRQLLLRAARDATGTRQTALRDTAAHLADALPTLRDTTNVAEAMGVEGQAARRYIATWPHLLTPHATVTAPAGRTSRPATDPVNAALSFGYGILRIAVHGALDHVGLDPHIGYLHGIRPGKPALALDLMEEFRALLVDRLVFTAFNQRQLTDADFEHHPGGSCQLTESGRKNYLTLWSQARARTWPHTLLTHDTPAATLPLLQARILARHLRGDIPRYIPWSPT
>NC_007777.1|WP_011437728.1|3969108_3969774_+|CRISPR-associated-protein-Cas4
MNPSDWWPGGDAHAGRLPISALEHHAYCPRQAALIHLDNVFADNIETMRGNVAHAHVHEPSPAVPTPQGNRIRQVTGLQVWSDRLGLYGVCDVVEISSTSAIPIEHKVGPYVPGGPADLQAGAQALCLRDMLTLDVPYAEVFSHTDRRRHRVDLTDTLATRIITAAERMRDILTTAALPEAVADRRCRRCSLHHDCLPELANAAAGTHDLFTPRPAGHWHG
>NC_007777.1|WP_011437727.1|3968224_3969112_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MAFNLDPEKKHDMVLLFDVTDGNPNGDPDNGNRPRTDDETGHGLVTDVAIKRKVRDTIGLAAEAEGLDLTRYQIFVEAGHALNTRLEESYLVKGLELGKKIDDAKAAKAREWLANRYVDIRLFGAVLSTGKTQSLGQIRGPIQVGMARSLDPVLPVDHAITRVTQTTQADIDKGERTEMGGKWTVPYGLYRAEIHYSAPRGRQTGVSAADLDLFLCTLVNMFDHDRSATRGEMATRGLYVFSHHNAFGVAPAHTLSARITARKISAGEPRSFGDYKIDVDDADLPDDVALTRVLG
>NC_007777.1|WP_011437726.1|3966250_3968134_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MLLQRLTEFQRPMISGVDDLPPFYQSRPMRWGLMIDADGQLAMPDLLDLSDPTDKLRRFGEPGPVPYLTRSSGASPLLGADDIQYVLGWADDDAKPDWVGRCHASFVDLVHRWATAFPADLIAQAVDGFFTRRGHNQVRRPEVWTSKQGIVLLVGDDGHWLPEERSVQIFWEREVQRRKAGGDSPDGGRRGVCLVCGQDGVLVERFPQGIPRRLVPLAGQAIAALVSANKKIHTYDFSDSLATVPICIGCARISVANLHYLLDHPDHSLSGSDGRMTWWTIGREVAVMTLMGQARAADVRVLGERVHSGRGTEDTDLEHERFCSVTISGSGARIAVRDWIDMPLAQLEENIIHWFGDHQTYGVNLARGGYVPLTRLVLATGRWIEQGGGDRSSGEYARFDDRSAQRPDGVRRDLLRIALKNLPVPPALFGHLLTRIRTDGHVDDARVALLRLALVRRARLADERNRPVPGPGLDPDNHDPAYLAGRIFAQLESIQYYASQMGREKGDRLNTTFADRYFAGAVANPKTALIQGWLLVHPWLKKIRRDSIARAVALENQLHGLNELLVASGGFPGRGNPDDQAMFILGYSHHRSDSMRRGGAANAAKTPGPGFPPNTPGMPADPGTPTP
>NC_007777.1|WP_011437725.1|3965585_3966251_+|type-I-C-CRISPR-associated-protein-Cas5
MTLTLPRSPSGDPPVAVQVWAEGALFTRPEFRVERVSYPVMTPTAAVGVLESIFWKPEFRWAPVAIEVLRPLHQFTLRRNETYDLPLLSDAASGVRRIDTVANRDQRSAVCLKDVAYRIHAHVELQDHATKDVAAYREQFRRRVSRGACFQQPYLGAREFPASFAPPDGTPVWKQDEDLGVMLHRIHHGPPVAFDWFTARLDAGVLYVPRAGIRGDVPAVA
>NC_007777.1|WP_083494856.1|3963363_3965589_+|CRISPR-associated-helicase/endonuclease-Cas3
MRHRLVDHLEGTALLAERFAAVFGAGEVGRFAGLAHDVGKASCAWQDGLLRAEATGVRVGEDHKTLGVLLAERRGAFPVLGLPLHGHHGGLTNPSEVRSMIKDRSKPRDVQDRAEAEAALRPLLPGLFDGPPVRLPVGFDEPGTSEMLMRFLFSALVDADGLDTAAHRSGGQPQVAAPADMAMLWDRFVGRRKEMLAGRPPAPAADRLRGEVYEACLAAAAGPTGIYRLPAPTGSGKTIAAAGFGLRHALEQGKSRVIVAVPFITITEQNHAVYRRLLDPVGAGKGAPVVLEHHSNVTVDDDGPAQRWRRLAAENWDAPFVVTTTVQLFDSLFGRKPAAMRKVHRLANSVIVLDEVQALPAPLLLPIVDGLRTLTARFGTTVLLASATQPELWALDPLESITPIEVISNPESLYKTSCRVRYEWWPDPKPTLEQVADRVADPAAAGADQSLTIVNTVANARQMRDLVAARVPATTPVLHLSTAMCPAHRREVLAEVKERLTARLPVRLVSTQLIEAGVDLDFPVVFRAMAPADSLQQAAGRANREGHLGPKGGLVVVFDPADGGRPRSYDLPVGITARYIGLGRADPDDLKALRLYYHSYLQNPRVSGRDSRGAAVQISRAALDFRAVAEGPKRTGEDPRPDRSKAFRMIDEDTVPVAVPYQGEEERVRQLVERIRMVPLPEPRLFRDLQPYLVMIQRRTRDRADVATLCQPVFGDLVEWAGSYDKNTGIVLEPSGEEFIA
>NC_007777.1|WP_011437723.1|3962522_3962765_+|hypothetical-protein
MTTVRPSEPPPSPQHASEFVTVTRIVHPPAVDIGLSVSPEATVEQVAAALASMPASAVFAEHFGDVDVTLVFRETASSGD
>NC_007777.1|WP_035958778.1|3962177_3962360_-|AlpA-family-phage-regulatory-protein
MTSSDIASLLGISQTAVNKMISKASDFPTPVIARPNFRAWRRPEVEAWLRQHRPGALDGQ
>NC_007777.1|WP_011437722.1|3960903_3961641_+|DUF2786-domain-containing-protein
MQPDVALDKIRKLLAMAEADGISEQARESYNLKATELIARYGIDQARLDARQNRPATPSDIRLDMDPPYARDKLNLLSSIAVPLGCQIVSHTRRDPDRLRQQAHLFGMTADLDRAQILYTSLLVQSSYGITAARIPTGENPRAFRRSWLAGFAVAVYKRLTAAEAAAKARALREDTTSTGPSTALVLADRATLVQRHLTHTYPRLRKGRARQLSGSGGRDGYHAGERADLGGTRLTPTQRPALGS
>NC_007777.1|WP_108913880.1|3973713_3975042_+|tyrosine-type-recombinase/integrase
MAELHGGGRPDDTGLTVARYLDDWLDGKASLAASTRRSYEEHVRLYLKPGLGHLRLADLRDHHIEQLYAAMRLIGRDLHGRKRSPLLVRLLEVRKDDPNHRRPLSASRLRRVHATTMSALNSAVKRKKLGVNPAEHVELPKARKPRPLVWTAPRIAAWERTGKRPSPVMVWTPQQAGAFLDFTVADRLYPLWHLIAHRALRRGEAVALGWTEIDIDDDSIYILDNLPGSVSGADDNLDLDGDEYTEPKSDAGYRTVSLDPATKNVLTTWQARQDEERAAYGKAWVDSGRMFTHPDGSRLTPNGVSQRFERLITRFATIRHEHAEHSWTVDQLAARHFMPEDAIQTALAFGPLPPIRLHDLRHTAASLTYRATKDLKVVSELLGHSSVHFTGDVYTSVFADADRAAAKAAADIVPRRHPPGQVEPDSLDDPTPPPANGPGLDL
>NC_007777.1|WP_035733244.1|3975758_3976394_+|Uma2-family-endonuclease
MVTTALPEDSWLRDLRPQPARVTAAEYEALSEEIARSIEIVDGYIIFCEAPAPDHQTAGRRLANLLERHARNAVKSGRYGCLTVNNDVDLRLRDIPLLNRRPDVILYRCLDRDRGERLRAEHALLVIEIVSPGSETQDTTDKLGEYARAGIQHYWIIRLDNDGVTSIERYALDRASMLYKHLGTLMKDEAGGPPEITNPIPITITWDDLAF
>NC_007777.1|WP_023840411.1|3979843_3980047_+|hypothetical-protein
MGRRDRPLTRSSRLHNLAPWKVLPDGRSPDSVTTGRPHPSDAQARREALHVLSLHVLSLHGLSLHGL
>NC_007777.1|WP_082456642.1|3980136_3981585_-|epoxide-hydrolase
MLPARHRRRRHEADAGVPGARARPGIGPGGAGPAGTARARLPRPAVPSLLPDHGRRGSAVPGPRRRAVHQHLRFLPAGPERPGPGGGPGTGARPGRTDRVLITPSRIRVPEDVLTGLRQRIARVRWPQPAPGPAWSQGTDLAFLQGMLADWATFDWRAAEERINGGYDQFVAEVSGLRVHYVHHRVPGADGPPVILTHGWPSSFVEMLPLVDRLRDPAAYGIDAPARDVVAVSLPGYPFSERPAGEHTLRDTARVWHDLMTGLGYPRYLAAGSDFGSGVSTFLALDHPDTVAGLYLTDLELDPVLDPAVDPTPLSPAERAYLDAGERWSLTEGGYHAIASTRPQTLAYGLTDSPAGLAAWLLEKWRAWSDCAEGRVPRVSREFLLTTLTLYWATGCVGSTLRDFHDNRQVQEGMTVGDRVLAPTAFGRFGNGLDDLRPPPPEFVGRLCRVVRSTVHDEGGHFPAVEVPDRLAADMLAFFAEC
>NC_007777.1|WP_108913811.1|3982687_3984688_+|hypothetical-protein
MDVRRVLNSFVPRRQAWARLDETVQDTGLADDTTGVLNPDFLALGLGATNMMGMLWSLALGRRVVGVELRGDPSLGVHWNIREDLYHHLGLIDQMMLERYGEAGIPRRGDGSLFILAECFYRPDTPAGAVTADEVVSGFLDALVGEPARIGGRIFHTEFIDDRWKDGKPHRTVTVLTPPEPPRRPDPTRVGRSTLEALEGPSTFQSAASEVMVLMRRYLEGVERMDLARGVTPRVRLFLSHRVVTTGTGSDAGYLKWLRREEGFGDASGGRKSIRIEQVRELDYNGRFHRVRVPGSKVIDIGIPELFMIAQGFNSTDADRLGFRQEDVLVDHHDGRGPVVAQADYLAGLLEVLVDGRLRRRIASDFDKEGNEYWVRQIAVGHEDDAEVGWILVQVPDYKTFDPILSGLVPPGTYRKSKQYRAGVQHLMREFYLDQVSQICEMPVSELERIQMPYGPKLFSLVERAGVDAQVAANGVVAGDTFGNGHFLTSGGAITGMIGHGHRVKLYWEARDAGVPHEQAIRGLADGIKQDTDDWFAVSAQEFSTALPINFGSERIATIEAAGGHRSSARATTIDATRRHRHTLVPLDPSDWRRLLVRSGRMHALALPPIPMTHPVVRGGGGLPDPADAQQDGATAGMGAGMGGCMVQPGGAMGGMDGAMAEVAAQ
>NC_007777.1|WP_011437741.1|3988031_3989669_+|GMC-family-oxidoreductase
MVPPGYGPAPTPQELADEYDICVVGSGAAGSVVAWLLARAGLSVAVVEQGGFVTDEDSYDDVLAAGESAWVRQENGTWAKVGSPWTTCNVGGGTLFFGGVLFRHRPLDFDPETVLGRADLPLRWPLEPAELTDYYDAVEDLIGVAGVADGDPSLPVRSRPYPLPPVATTAEGRRLTEAARSMGWAPFPTPLGVNSIEYRGRPVCAADAPCISRRCPIHAKGDALDRFLRPAMAAGARLFTGLKAEALLGDARRDATALRCVRMPDGERVVLRARHFVLCANAVQTAALLLRSTTVRHPAGLGNSHDMVGRGLCFKIGEYLVGYCHEPTSAPARSRLMGLGPISTCCVTDLYQDPAAPGGLGGLLYENRPERTYRLRDTEHLLRIEALVPDEPQPGNRVRLGPGTDAHGVPDVLMDYQAHPRDLARSEYMLGQGEALLRAAGCDVIVREASGWALGSGHLHGTCRMGEDPATSVTGPDGRLHDADNVFVADGGLLPFPGGVNPTLTIQALALRVAHRLLAERYATGRVPIGELVGPSVTAANRSPR
>NC_007777.1|WP_011437742.1|3989593_3990511_-|hypothetical-protein
MSAFIHPPDEDFLGRFVARNPWLGARQALLARWLDDPTDREEIAARLAVPLGRLLYSFNDTAPLQEPVRFGYRRTGYAVVGMAGVCDDIVGGRFPRFGSPVTLRCFLDPPGLLPRGMLEAADWNFMDAGRDGFLGYCYGVRHGDTLYLAGLQSDLAARYAYLFQAHGGRTHVRVGEEVVHGDTTVLAARWGSHVPLLRRTFQRYWIDVLLAGVLAWSVQDGGLDAVGVLRFPLTEAEGRSGHLVHRVYRDLPDRLGCSPRTVVVGARRHPYQVARLEQVADYLGDRFAAVTLGPTSSPIGTRPVA
>NC_007777.1|WP_011437743.1|3990507_3991809_-|glycosyltransferase-family-4-protein
MTTRTTGPRQAAAGPDGGSPPHVLRLTPYYFLADRELTHRELQYEPIGGMQVQIMQTTEQMSALGVRQSVLLPRRPGMPRSLMLDPRTRLELLTLPVAPIPTRSKGYIGLLVSWGLAVVVACVGKRLRGTRRQYSLIHVHCSELPWTFLFAVLARLLLGRPLVLTVHCSAIATFHPETPLGWVLIGPARFFERHAVRRADAVVVLTDRVRRAYLERGLTGPDRVHVVTDGVHLADFQRPGAEAPSEPPSEPPVVLYCGRFAPEKGWADFVDAAALIVAKGVPARFVMCGDGNELERCRARARRLGIADRIELPGHLDRSRLPDVVREAAVVVIPSRHEEMGGTVIEAMAAGRPVVVTDVGGLPTVVGHGMAGIIVPPCDPPALAEAVAELLDSPQRCARLGAAGAHRARQFDQESVTRRLLDVYRLVLAHSRG
>NC_007777.1|WP_011437744.1|3991809_3993081_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MSELALLGGTPVRRDRPWPKWPQYDAASEQALLDALRSRRWAVSWASDGTHACERRFAEAFAAYSDVPYGVSVDHGSSALVVALEALDIGPGDEVVVPTLTWVAPVTAVLRVGALPVLADSDPETGCLTAQSIRDAMGPRTKAVIVVHLAATVADLPAITALTEDAGIHLIEDCAQAHGARWGDRAVGSFGAIGAFSFQNGKVLAGGEGGAVITADERLYRRAQQLRADSRRYHPGPPVAGTLELVEDGEVMGANYCMSELTAALLLDQLPRLQDQHRHRAKTAADLEQGLARLGGFGPIPVPEQVQLRSIYEYGVRFPAGTFGAVPLDRVAQALTAELGMTWYPPDAPLHRSVMLRPHTKRRFAAAWTEAARDRAFSRDFGGARRYCETTLLFHHSALLGDSTDADDIVAALAKVRDRHPDL
>NC_007777.1|WP_023841786.1|3993077_3994118_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MTDDDMLALVVRGHRDHGLERRPRPEPGPGEALVATDFAAMCGTDLRLLDGTLHDAEYPVIPGHEWSGTVLAAPDRPELVGRAVVGDNFRLCGRCPACLAGRPNLCTDIDEVGFTRPGAFAQLFTIPAANLVALPPQVPGPQACLLEPLGVALHAVERAGAVSGRSVGVIGAGTIGLLVAQLARGAGASRVRVADPLQSRRRIAADLGVDADPGIEGWHPDLPEVVFDATGAAGVFPRGLTATAVGGVYVLVGYSGAEAVTVEPSTVMLRELTVQGVLSGQGQLRTALAKVVAGEVRLGPLTGDPVPLTSYRSVLERDGPAPLRLFFHVGGDRTAGATSQEQGVTA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_11

4015472-4015653

Orphan

Consensus_repeat	Method
GGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	CRISPRCasFinder
GGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACT	PILER-CR

2 spacers

The CRISPR arrays of NC_007777_11

>merge|NC_007777|11|4015472-4015653|CRISPRCasFinder,PILER-CR
GACGTCAGCCCGTGGCTGCGCCCGGCGAGGTTCCCAACTCCTCACACCAGGTGAGGCCACATGTGAGTCCGCGGGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAACTACTCCGGCACCGAGACCGCCGCGAACATCACAGGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC

>NC_007777|11|10|4015472-4015653|CRISPRCasFinder
GACGTCAGCCCGTGGCTGCGCCCGGCGAGGTTCCCAAC	TCCTCACACCAGGTGAGGCCACATGTGAGTCCGCG
GGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC	TACTCCGGCACCGAGACCGCCGCGAACATCACA
GGCAGCGCCGGGCGTCCGCGCCCGGCGAGGTTCCCAAC

>NC_007777|11|5|4015489-4015653|PILER-CR
GCGCCCGGCGAGGTTCCCAACTCCTCACACCAGGTGAGGCC	ACATGTGAGTCCGCGGGCAGCGCCGGGCGTCC
GCGCCCGGCGAGGTTCCCAACTACTCCGGCACCGAGACCGC	CGCGAACATCACAGGCAGCGCCGGGCGTCCGC
GCCCGGCGAGGTTCCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_035942159.1\|4013309_4014035_-\|IS5/IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372577
NC_007777.1\|WP_011437762.1\|4011098_4011473_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|376501
NC_007777.1\|WP_041257976.1\|4023285_4023558_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437769.1\|4018556_4019699_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NC_007777.1\|WP_023842153.1\|4014055_4014901_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NC_007777.1\|WP_011437760.1\|4009748_4010459_+\|7-cyano-7-deazaguanine-synthase-QueC	unknown	unknown	gnl\|CDD\|284031
NC_007777.1\|WP_023842148.1\|4007694_4008573_+\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|381175
NC_007777.1\|WP_023841973.1\|4022966_4023293_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NC_007777.1\|WP_011437771.1\|4021129_4022569_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_007777.1\|WP_011437774.1\|4025042_4027232_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_007777.1\|WP_108913880.1\|4016652_4017981_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271189
NC_007777.1\|WP_070133240.1\|4008609_4009746_+\|queuine-tRNA-ribosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376596
NC_007777.1\|WP_011437761.1\|4010460_4011099_+\|7-carboxy-7-deazaguanine-synthase	unknown	unknown	gnl\|CDD\|275301
NC_007777.1\|WP_023841509.1\|4024305_4024734_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374026
NC_007777.1\|WP_167534319.1\|4018014_4018194_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_035734610.1\|4019991_4020651_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437763.1\|4011469_4012336_+\|16S-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|336604
NC_007777.1\|WP_083771087.1\|4023643_4024309_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_085949899.1\|4012455_4012785_+\|preQ(1)-synthase	unknown	unknown	gnl\|CDD\|237320
NC_007777.1\|WP_011437757.1\|4005110_4005575_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_035942159.1\|4013309_4014035_-\|IS5/IS1182-family-transposase	gnl\|CDD\|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	6.44451e-31
NC_007777.1\|WP_011437762.1\|4011098_4011473_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	1.7263e-48
NC_007777.1\|WP_011437769.1\|4018556_4019699_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	9.19756e-26
NC_007777.1\|WP_023842153.1\|4014055_4014901_-\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.14657e-29
NC_007777.1\|WP_011437760.1\|4009748_4010459_+\|7-cyano-7-deazaguanine-synthase-QueC	gnl\|CDD\|284031	pfam06508, QueC, Queuosine biosynthesis protein QueC. This family of proteins participate in the biosynthesis of 7-carboxy-7-deazaguanine. They catalyze the conversion of 7-deaza-7-carboxyguanine to preQ0.	6.02244e-106
NC_007777.1\|WP_023842148.1\|4007694_4008573_+\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|381175	cd11648, RsmI, Ribosomal RNA small subunit methyltransferase I (RsmI), also known as rRNA (cytidine-2'-O-)-methyltransferase. RsmI is an S-AdoMet (S-adenosyl-L-methionine or SAM)-dependent methyltransferase responsible for the 2'-O-methylation of cytidine 1402 (C1402) at the P site of bacterial 16S rRNA. Another S-AdoMet-dependent methyltransferase, RsmH (not included in this family), is responsible for N4-methylation at C1402. These methylation reactions may occur at a late step during 30S assembly in the cell. The dimethyl modification is believed to be conserved in bacteria, may play a role in fine-tuning the shape and functions of the P-site to increase the translation fidelity, and has been shown for Staphylococcus aureus, to contribute to virulence in host animals by conferring resistance to oxidative stress.	4.2212e-112
NC_007777.1\|WP_023841973.1\|4022966_4023293_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	0.000759413
NC_007777.1\|WP_011437771.1\|4021129_4022569_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.00838718
NC_007777.1\|WP_011437774.1\|4025042_4027232_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.38888e-71
NC_007777.1\|WP_108913880.1\|4016652_4017981_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.45798e-12
NC_007777.1\|WP_070133240.1\|4008609_4009746_+\|queuine-tRNA-ribosyltransferase-family-protein	gnl\|CDD\|376596	pfam01702, TGT, Queuine tRNA-ribosyltransferase. This is a family of queuine tRNA-ribosyltransferases EC:2.4.2.29, also known as tRNA-guanine transglycosylase and guanine insertion enzyme. Queuine tRNA-ribosyltransferase modifies tRNAs for asparagine, aspartic acid, histidine and tyrosine with queuine. It catalyzes the exchange of guanine-34 at the wobble position with 7-aminomethyl-7-deazaguanine, and the addition of a cyclopentenediol moiety to 7-aminomethyl-7-deazaguanine-34 tRNA; giving a hypermodified base queuine in the wobble position. The aligned region contains a zinc binding motif C-x-C-x2-C-x29-H, and important tRNA and 7-aminomethyl-7deazaguanine binding residues.	2.13206e-109
NC_007777.1\|WP_011437761.1\|4010460_4011099_+\|7-carboxy-7-deazaguanine-synthase	gnl\|CDD\|275301	TIGR04508, queE_Cx14CxxC, 7-carboxy-7-deazaguanine synthase, Cx14CxxC type. In the pathway of 7-cyano-7-deazaquanine (preQ0) biosynthesis, the radical SAM enzyme QueE is quite variable. This model describes a variant form in which the three-Cys motif that binds the signature 4Fe-4S cluster takes the form Cx14CxxC, as in Burkholderia multivorans ATCC 17616. The crystal structure is known.	4.84747e-134
NC_007777.1\|WP_023841509.1\|4024305_4024734_+\|hypothetical-protein	gnl\|CDD\|374026	pfam15693, Med26_C, Mediator complex subunit 26 C-terminal. Med26_C is the C-terminal domain of subunit 26 of the Mediator complex in eukaryotes. Med19 and Med26 act synergistically to mediate the interaction between REST (a Kruppel-type zinc finger transcription factor that binds to a 21-bp RE1 silencing element present in over 900 human genes) and Mediator. The C-terminal domain is critical and sufficient for its assembly into Mediator and its interaction with Pol II. The most highly conserved C-terminal amino acids are critical for these interactions because deletion of the last eight amino acids from the Med26 C-terminus disrupted binding to Mediator and Pol II.	0.00453654
NC_007777.1\|WP_011437763.1\|4011469_4012336_+\|16S-rRNA-methyltransferase	gnl\|CDD\|336604	pfam07091, FmrO, Ribosomal RNA methyltransferase (FmrO). This family consists of several bacterial ribosomal RNA methyltransferase (aminoglycoside-resistance methyltransferase) proteins.	4.37176e-125
NC_007777.1\|WP_085949899.1\|4012455_4012785_+\|preQ(1)-synthase	gnl\|CDD\|237320	PRK13258, PRK13258, 7-cyano-7-deazaguanine reductase; Provisional.	3.22514e-42
NC_007777.1\|WP_011437757.1\|4005110_4005575_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	3.14132e-18

>NC_007777.1|WP_023842153.1|4014055_4014901_-|IS5-family-transposase
MAHAHRHRYPSDLSDSQWALVGPLLPPPAAVCRPEKHDRRDLVDAILYVVRSGCAWRALPSDYPPWQTVYYYFALWHDLGVTERVHDVLREQARRAEGRDVEPSAGIIDSQSVKGADTVPASSRGYDAGKKVNGRKRFIAVDTMGLLLAVLVVPASTHDTASGRQLLLDSFFAGRRLRLVFADAGFAGVFMDWAARILTLTLQVVRKPAGQKGFSVLPRRWVVERTWSWITGYRRHARDYERRPDHAESLIRWAMIATMVRRIDRRTPAQRPGPRPLQRII
>NC_007777.1|WP_035942159.1|4013309_4014035_-|IS5/IS1182-family-transposase
MTALLADDRERHGNWRKVPARDQALLALAHLRNGDTYTRLVEGFQVGVATVCRYVHEAVALLAGRGRTLLAAVWAFAWCRSNFLILDGTVIRINRIRAHNRLYYSGKHKHHGVNLQGLMDPYGRMIWISDGLPGSTHDITAARSHNILHLINQAETIYLYADKGYVGGESEQLLTPRKKPQNAELPDADKEKNRSLSATRAVGERGFAVLKNWHVLDRYRGCPRRVGTISQAILVLTHEGI
>NC_007777.1|WP_085949899.1|4012455_4012785_+|preQ(1)-synthase
METFPIDDTSQEIRIDCREFTCRCPITGQPDWATIRIDYRPGGRGLETKSLKLYLETFREEGIFHEHLATLIRDDLVAALAPVQLTVTVNFNARGGIALAASSTYRREA
>NC_007777.1|WP_011437763.1|4011469_4012336_+|16S-rRNA-methyltransferase
MTPPGADQEAVAAAAARIARSAKYRGVHPETIAHVVEQEASAGGTGPVEHRARVRLHRVAALHLLSGRTAVLRREVARLPTGDPQALKAGCRAVLARHVSTAERLADLDDFYPALLSILPAPDTVVDIACALNVLTVPWLLETCDATYTGYDLNADFVEIGNAFLAMVHPQGWVVHHDVVAQGPPPRADLALLLKTYHCLEDRRRGSGLRLVETVDARHVAVSFPTRAMNGRPAVFAPPMQEELERLADRRGWSVDRVRLSTEELVVLGRSPQDMSSPEALPTRAHQG
>NC_007777.1|WP_011437762.1|4011098_4011473_+|6-carboxytetrahydropterin-synthase-QueD
MEIFREFTFEAAHRLPEVPEGHKCARLHGHSFRIAIQVVGPVDPRAGWVMDFADLRAAFAPLHDQLDHRYLNEVPGLDNPTSENLARWIWDRLAGELPLSAVTVRETCTSGCIYRGDEPDRTPA
>NC_007777.1|WP_011437761.1|4010460_4011099_+|7-carboxy-7-deazaguanine-synthase
MVYRIKEIFYTLQGEGVRSGRPAVFCRFALCNLWTGRERDRHRAVCQFCDTDFVGTDGPDGGVFDTPDDLADAVAARWPSDAPGALPYVVCTGGEPLLQLDTPAVSALHTRGFEVAVETNGTCPAPAGLDWVCVSPKAGAPLRLTTGDELKLVFPQPGAGPELFAGLEFGHHLLQPMDGPHREANTRAALDYCLAHPRWRLSIQTHKILGIR
>NC_007777.1|WP_011437760.1|4009748_4010459_+|7-cyano-7-deazaguanine-synthase-QueC
MNPTRGAVGGTDPRPAAVVLLSGGLDSATVLAIANQQGFACHALSFRYGQRHEVELAAARRVASALGVVRHVVVDIDLGVFGGSALTDPTIAVPAAGTAEEIPVTYVPARNTIFLSFGLALAETAGAWDVFIGASSVDYSGYPDCRPEYLAAYQAMANLATKATVSGERTLSVHAPLMHLSKADTIRLGLSLGVDYGLTHSCYDPGPDGRPCGRCDSCSLRERGFTEVGVPDPAGG
>NC_007777.1|WP_070133240.1|4008609_4009746_+|queuine-tRNA-ribosyltransferase-family-protein
MPVVPAPVLATPHGTVELPTFLPDGTRAAVRSTDPRDLREVGIEAVMCNAFHLAQRPGVRPVKRVGGLRRFMAWDGVVVTDSGGFQVLSLLRRQGQHSAIRPGGVVFRNPADGTKVELTPQRVIEWQFGLGSGVVIALDDCTGPEDSPAEVVASVDRTIRWFRDTRTAFDLQCRQRRLENPPLLVGVVQGGADPDQRKRCVEALVEAGAQGFGFGGWPLDGNGVLEREMFALLSASTPPEAPLFALGVGKPEHLVALCQIDRRWVFDCTIPTRDARHGRLYAFNNAPLAADGSFYQNVHILDERNHRIDEPICPTCDCPTCTRYGRSYLHHLFRVRDGQADRLATLHNLRFYTRLIEQLRAGGRALAAGPAEIGDDDT
>NC_007777.1|WP_023842148.1|4007694_4008573_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MPGTLYLVPVPIGDPGDITARAVDVLRQVPVVAAEDTRNARRLLQPLGTSPRLLSYHDHNEQERGPQLLSLLQEGADVAVMSDAGTPLVNDPGYRLVAAAIEAGIPVRPLPGASAPVTALVGSGLPVHRFHFLGFLPRRPAARRAALEQVRGLDASLVLFEAPHRMTECLADLTAVLGERRAALARNLTKPDEQFIRGTLDEVRAVLAGEQPVRGQFTVVVEGAGTRAAAGETELADRVAEAMLRHGAGARLAREVVREVTGLPRNQVYALVGEAEGRVRSGTCPPAGGPAD
>NC_007777.1|WP_011437757.1|4005110_4005575_-|carboxymuconolactone-decarboxylase-family-protein
MAEKTLTSSSFRLRVDLLAPHIMSAMEAFDAATDKVSLPASLLELVRTRASQINGCAFCVGAHSPAALEAGATQKQLLALPVWRESPHFSAQERAALTLTEAITQMDRRPVTDEMWGEVSVVLTEVELAELVWVIAAINVWNRVAGTARPWPVA
>NC_007777.1|WP_108913880.1|4016652_4017981_+|tyrosine-type-recombinase/integrase
MAELHGGGRPDDTGLTVARYLDDWLDGKASLAASTRRSYEEHVRLYLKPGLGHLRLADLRDHHIEQLYAAMRLIGRDLHGRKRSPLLVRLLEVRKDDPNHRRPLSASRLRRVHATTMSALNSAVKRKKLGVNPAEHVELPKARKPRPLVWTAPRIAAWERTGKRPSPVMVWTPQQAGAFLDFTVADRLYPLWHLIAHRALRRGEAVALGWTEIDIDDDSIYILDNLPGSVSGADDNLDLDGDEYTEPKSDAGYRTVSLDPATKNVLTTWQARQDEERAAYGKAWVDSGRMFTHPDGSRLTPNGVSQRFERLITRFATIRHEHAEHSWTVDQLAARHFMPEDAIQTALAFGPLPPIRLHDLRHTAASLTYRATKDLKVVSELLGHSSVHFTGDVYTSVFADADRAAAKAAADIVPRRHPPGQVEPDSLDDPTPPPANGPGLDL
>NC_007777.1|WP_167534319.1|4018014_4018194_-|hypothetical-protein
MAGEGASVPVDADELLVALGGPAAVVGMAWSTGCLTDLDRARLVWSPALLVDQEPMRSV
>NC_007777.1|WP_011437769.1|4018556_4019699_+|site-specific-integrase
MARPSLDLGVGGKIFYSATAKGSRARCFYRDHDGVRREVERGGTSKAAATRALKLALRDRLRVAVGDGDITPETTMKVLGEAWFAEQQKKDRSPNTLAAYRTTLDRHVYPALGGVKARQVTVGTADRFFSAVTTKSGPGAARIARTVLSGMCAMAARLDAMDRNVVRDAGQITRPEPKPVSKALGAAQLRQLRALLTYDERARRRDIPDLVDMLIATGARIGEVCGIVWDAVDLDAGTVEIRSTVVRITGQGLINKPRPKSKAGHRLLLLPAWAVAMLRTRHHGQNSDEVVFPAQMGGLRDPSNTQADIRDAVNDAGFPGLTSHLFGRRSVATLLDGDGHTPRQIADVLGHANPSITLSTYMGRKVSNPGAAETLAVLAI
>NC_007777.1|WP_035734610.1|4019991_4020651_+|hypothetical-protein
MITIVPSYRPIAVDVHTWDGHDGMKLEAVLMLPGLDLRLIDGVSDVNAAAYWLQVAQAVLLAAGRLLRRAQTPIPDDELAAQTHALGPLVRLLGLFQTPRMSPDDYAHLYTLLRTVDDAMTARRAALPTENAPTDNGAGQTWATIACAALDAAMRAYGTTEDVSGDETPPDRGPRRDVMHLLWSLTHMAKDTDTTLDELDTMNRLLQTVQQTVILGQQP
>NC_007777.1|WP_011437771.1|4021129_4022569_-|helix-turn-helix-transcriptional-regulator
MPPQPSTHPGWNPGQLRRHREQLGLSRAALADKIANIDPVVAKEAGFTPPAAGPEMISKHERGVNFPGTSYQAAYCHFFQASEPELGFRYPYPHEHKDDHAGSVTPPLAGIPSQHQPTPQTEGVETANRRDLLSLTAAAIGLTATGTAAAMIAPADRLAILERATAGSGAASAAEGALQAVVADYLHHPPAETLRRAIALQQLTDAITAQYPLRPADQARVWRVSGVATGIRGWLENNAGHTTDARLSLREAHRRGELLEDNQLIAWTRFMQATIEDYAGNPAGAEQYALDGLRHAPSGPQRAILLVGSLAGARAAHGDIRGVDAAVSEAESIVSRLTPDERGPREDHRTVVDSLTSIGLPIFSLDVGRVYSRLGEIGRFMEVTADVRPAIEQGSSSRTSVFRADEAVAVARSKSPDLDRVAALARESLRLAGPFQTAHIASRVNVVLAVTDRDYPAIRSLADEAHTWRISRNRPIDLV
>NC_007777.1|WP_023841973.1|4022966_4023293_+|DUF397-domain-containing-protein
MGRWEDEHFARLECEVPVRGRDRLAWWRTARAGLGAVEVAAVPVGVLGLLDAPGVAVRHGRIPAGAGLLFEAGEWAVFLAGVGRGEFGFARLAALPVPPAAGAGAGDG
>NC_007777.1|WP_041257976.1|4023285_4023558_+|hypothetical-protein
MGEQACVGDGTGSGWSEAWSRILAGTGGREAATVWVVAVVDGPERDVDGVVGYFATPRDADRHACAHGYGEWLVVPALVLHRPDDPVVVL
>NC_007777.1|WP_083771087.1|4023643_4024309_+|hypothetical-protein
MGACPGRGTGGGTAHSGGRPAGTGDVDDRADLVHGDPLGGAAGRAGTTAGLPAPRWRPAGAGDTVTRLWEVQAGNVPDVELPGGDGLLLAGPVLEVDCNRAVQVRVRPVEDGPLLPAAVAATAQDGVATVTAHPRTCPPGSTRLAFLLGRYIHGDRVAAGVDMPVVTVGCALRPEEFGGVGIMPVSHRVRLLGGGGRWVEHTMWEVMSLPRYAALTAGDRL
>NC_007777.1|WP_023841509.1|4024305_4024734_+|hypothetical-protein
MNGTDRPESDKGSGLDESFVARLELALTARIRAEHPGRNADLIGLVVGRTVELLAGSAAHNMRHPLADAVVYLLAHGLRDGRYHQVLADTRLDLPGLTRDVDAFNREVALLDRLHERHRAPGGRGDDGSAATTPREPGGPGG
>NC_007777.1|WP_011437774.1|4025042_4027232_-|protein-kinase
MPQPATALRIDDPTHIGVYRLRGRLGVGGMGVVYLAEDPHHHPVAVKVIRVEFAADPEFRARFRHEAEAARRVPRFCTAAFLDADPNAERPYLVTDYVPGPTLAQAARRPLRGAELEQVAVHIAVALTVIHGAGVVHRDLKPSNVILSPTGARVIDFGIARAHGMTMFHIDEQIGTPAYTAPENIDGAPPDPAADIFAWGGVVLYAATGQPPFGDRSSELLLHRIRYDHPTHLNQLHGRLHDTVTAAMAKAPEQRPTAEQLYRMLTSTQPPTPPPAAPTRHGRQGPQPAPPPPAIPPHYARPIPPARRTRITILATATAVVLAAAVLLITDRPRHTPTTANRPDRHGAAAILADQATTDDPDLAVRLAVAAYRLNPDPAARIALLAAAARGLPPLATFRHSGKILSVAISPDGHTLATGSADHTARLWNPTHPDQPVATLGHDDGVNHVAFNPAGTLLATTSDDTTIRLWNITDPHHPDQVNTLTLHTGGTPYGAAFNPAGTLLAISTSTGAVLLIDITDPRATSTLATFTPHSYIAGNVAFSPDGHTLATASLDGTARLWDVTDPRTPRPLATLAPGPTFDATFSPDGTMLATAQQDGTTLLWTLTTPTQPQPAATIPETGMTTTAVFAPDGTTLATASTDGTAHLWDLTNPRTPRPLATLTGHTGPVETLAFDGTMLATAGDDTTARLWDLNPTSLTRRACTTPTGRLSEDEWHRYLPTFPYQPPCP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_12

4056539-4056625

Orphan

Consensus_repeat	Method
AGACCGGCAGGGTCGTCAAGACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007777_12

>merge|NC_007777|12|4056539-4056625|CRISPRCasFinder
AGACCGGCAGGGTCGTCAAGACCGGCAGGGTCGGGAACGGCGTCTTCAGGACGTGTGTCGTCGAGACCGGCAGGGTCGTCAAGACCG

>NC_007777|12|11|4056539-4056625|CRISPRCasFinder
AGACCGGCAGGGTCGTCAAGACCG	GCAGGGTCGGGAACGGCGTCTTCAGGACGTGTGTCGTCG
AGACCGGCAGGGTCGTCAAGACCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_035733690.1\|4061938_4062127_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437788.1\|4045288_4050550_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180777
NC_007777.1\|WP_139140041.1\|4066930_4067542_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380149
NC_007777.1\|WP_082456772.1\|4059276_4060290_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|274729
NC_007777.1\|WP_011437795.1\|4060597_4061644_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NC_007777.1\|WP_011437797.1\|4062258_4062696_-\|SsgA-family-sporulation/cell-division-regulator	unknown	unknown	gnl\|CDD\|377399
NC_007777.1\|WP_011437784.1\|4038702_4040217_-\|DUF839-domain-containing-protein	unknown	unknown	gnl\|CDD\|253386
NC_007777.1\|WP_023841517.1\|4057493_4058081_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437785.1\|4040631_4041969_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223540
NC_007777.1\|WP_082456771.1\|4043701_4045042_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237050
NC_007777.1\|WP_157858569.1\|4042319_4043345_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376263
NC_007777.1\|WP_011437782.1\|4035139_4037248_+\|FTR1-family-protein	unknown	unknown	gnl\|CDD\|271139
NC_007777.1\|WP_011437791.1\|4053574_4054945_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NC_007777.1\|WP_011437789.1\|4050546_4051671_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_007777.1\|WP_049761115.1\|4067836_4068406_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437783.1\|4037244_4038513_+\|deferrochelatase/peroxidase-EfeB	unknown	unknown	gnl\|CDD\|273606
NC_007777.1\|WP_011437790.1\|4051667_4053557_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
NC_007777.1\|WP_049761114.1\|4065879_4066473_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_023841518.1\|4058179_4058887_+\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437798.1\|4063070_4065767_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_011437797.1\|4062258_4062696_-\|SsgA-family-sporulation/cell-division-regulator	gnl\|CDD\|377399	pfam04686, SsgA, Streptomyces sporulation and cell division protein, SsgA. The precise function of SsgA is unknown. It has been found to be essential for spore formation, and to stimulate cell division.	4.34532e-36
NC_007777.1\|WP_011437788.1\|4045288_4050550_-\|hypothetical-protein	gnl\|CDD\|180777	PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional.	0.00128904
NC_007777.1\|WP_011437795.1\|4060597_4061644_+\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	2.14128e-155
NC_007777.1\|WP_011437784.1\|4038702_4040217_-\|DUF839-domain-containing-protein	gnl\|CDD\|253386	pfam05787, DUF839, Bacterial protein of unknown function (DUF839). This family consists of several bacterial proteins of unknown function that contain a predicted beta-propeller repeats.	1.13833e-63
NC_007777.1\|WP_139140041.1\|4066930_4067542_+\|hypothetical-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	0.00359387
NC_007777.1\|WP_011437785.1\|4040631_4041969_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223540	COG0464, SpoVK, ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].	8.79778e-42
NC_007777.1\|WP_082456771.1\|4043701_4045042_-\|threonine--tRNA-ligase	gnl\|CDD\|237050	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed.	3.79754e-173
NC_007777.1\|WP_157858569.1\|4042319_4043345_-\|hypothetical-protein	gnl\|CDD\|376263	pfam18844, baeRF_family2, Bacterial archaeo-eukaryotic release factor family 2. Bacterial family of the archaeo-eukaryotic release factor superfamily. Likely to play roles in biological conflicts or regulation under stress conditions at the ribosome. This family contains a well-conserved 'FP' motif in the catalytic loop.	1.81519e-38
NC_007777.1\|WP_011437782.1\|4035139_4037248_+\|FTR1-family-protein	gnl\|CDD\|271139	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon. This family includes the EfeO domain, an essential component of the EfeUOB operon which is highly conserved in bacteria. However, its biochemical function is unknown. EfeO contains an N-terminal cupredoxin (CUP)-like domain and C-terminal imelysin-like domain that may bind iron. Algp7, a member of EfeO family protein from Sphingomonas sp. A1, is found to bind alginate at neutral pH, but does not contain the CUP domain, thus having a role that does not seem to be related to iron uptake. Some members of this family are fused to an N-terminal putative EfeU ion permease domain. The imelysin-like domain of this family also contains the GxHxxE sequence motif and a highly conserved functional site, suggesting a similar role to other imelysin family proteins containing the same motif.	1.10847e-76
NC_007777.1\|WP_011437791.1\|4053574_4054945_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.32115e-09
NC_007777.1\|WP_011437789.1\|4050546_4051671_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	7.45612e-24
NC_007777.1\|WP_011437783.1\|4037244_4038513_+\|deferrochelatase/peroxidase-EfeB	gnl\|CDD\|273606	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme. This model represents a small family of proteins with a typical Tat (twin-arginine translocation) signal sequence, suggesting that the family is exported in a folded state, perhaps with a bound redox cofactor. Members of this family show homology to Dyp, a dye-decolorizing peroxidase from Geotrichum candidum that lacks any typical heme-binding site.	6.69126e-155
NC_007777.1\|WP_011437790.1\|4051667_4053557_-\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	1.17898e-05
NC_007777.1\|WP_082456772.1\|4059276_4060290_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|274729	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	4.00703e-29
NC_007777.1\|WP_011437798.1\|4063070_4065767_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.15734e-78

>NC_007777.1|WP_011437791.1|4053574_4054945_-|VWA-domain-containing-protein
MNDRDRLGVEGRMDRGVTKPGGVLRLTISVADPPRGRREVAVAVAVDASLSMLHPAAPDAVSKWELAQRVLERVHGLLPDGCPLVLVRFAREARVISAGRRPDRLPAVDGPTNSDADSYTNIGDALAVAGRELLAQAPDADVYRVLLITDGEANIGRWQPEQLAHIVAGLGDQGIGTDALGIGVDARDEVLAEMVGVCGQTQHVWAAAEDVDRIDAIVSSLIEPVVGAAAGRGELRVLIRPGWTVEALRRIKPQRHLMKVPPPTSRGTELRLPLPAVSTGEDRPVFLLRLRAPDTPLGAHTILQARGGVVAGGRRLAVDSRADPHAAQRFRATVEADVFPDAESSLEHEESIAEFDEEIAKRASFAHSRESVTELFRNAALWAADRGFDDLADHYNATLRALGQGVAPADAVSGARVRATRTRTRTRDLVEADPVSGRQHGGAASRRRLDDVLGNS
>NC_007777.1|WP_011437790.1|4051667_4053557_-|FHA-domain-containing-protein
MSSTTVLFDVSNITRDGSPGSFAQIGLGCAHGARCPRRCGVTARLFAVEAAARRAFGADATFRYVADNSLRGLLDDLAPLQRYYRDGALAWAAEADDILLEEARAVGGKVVSKDNFYGKRNIDAHAWIQGDASTFFGWKVLPAAPAGENVKLVRRAMNRIDTVTWERAARQDEVKASGLRGRPEVVAAARANAYRCVTPDCVNARLGPLVSPPMRVAGRGQGARLVCPLCRRPVQEIETDTGQAVGDASGAASPVPSASPMPPAPRDAPAPRGATEPLDLDAPDRQAGHGEPGEGSRRTLADALGDALADDATIFDAPAYIPPSGTVGAPTIVGLPVPSGAGWDARVVAGPVVLRIEGGGTHRLVTLEVGTTVVLGRHPDHNLGSEQLVDVTAGLGSSYDYISTRHVEITLTAAGTAMVVDRSHNGTSLGDDRLVRDLPREWRFDVPLHLAGSLVRVGRVNAAGTAGAAEATRAAEATRAAGRPGGTGWRLTVRRGDGSSFDTPNVGPGERIVLGRQPNAVQRTADDLIVVDVCDRLQIDAAGRVSRRHLMVGNERDGTVTLTDLSTNGSWVGARRLTPGVAERWDGEEPVWLVRDVVGLEVHVTGPWPAGGVLGNGGPGGGGVPGGGR
>NC_007777.1|WP_011437789.1|4050546_4051671_-|serine/threonine-protein-kinase
MSTVASDLEIVERLRYGASFASVPRTWGRGRYRCVRHLAEGGQGYVELARDEWSNALVVVKGAWWGGRDHDINPEYARTQYEKRSIDVEDAVAVQAALGEITHGVPALVDVVYGPSPTRHDHNALVTGGNEREVERYNREAFIVMQFIGDIGQMVPTTLDSRVTESGPLSARQVVELADQISATLEAMHTIRPQRLYQHEERIRGYWVHGDVKPENILVAGDPPRYSLVDLSTAAIVEPSAKVMPTTATPGYAPPGAEPLSPQYDLHCLAATLLFALTGDRPDDWLGGATEARSAADAAGSRADAEARDEKLRQLRGELAARRVHPMLIRLITDCLPADPRFRLGTATVLRAEIAAVRTALVAREVLSDEEPQP
>NC_007777.1|WP_011437788.1|4045288_4050550_-|hypothetical-protein
MSWWNRSAWGSQPDGESKSNPGAAPDRGAGSNGRAFQGGRTGSTGAASSGGGGYSGSAASSGGGGYPGGTAGPAGADDFDDFDDFADPEPLPAGPAGADDFDDFADPEPLPAGPADGAAQAQRGHRPARTAGARSAPGAPPAEVAEVAEVADQRPAVVGRSGRTWREMPRRIRGAGADCRVRLVSLAGLGFGALRTAGAGGPSTLRVGMELLSLGNPLTPLLLDIVDGPDGVPTGYEAPTGYITSWAAGPLTDPLERQRGDDSMAAQLANGEFVAPADVMDMLAPLGALLDDAATQLGVVPVELSPDHLVHCRGSLRLVGYGRHGYAPARGVIPPASERSQDTVELLGDDVPAPDAPLEEWRAAQARSLARLIGWLSTGRRPTAYGAVTGGSRATREQAVDRYLRGCGIDARVADLQPGRLREELTTLAAAARRAKITEDLAASDVIIAYHHDTAARGGFGDRNPRFERGLVGGTYLGTVDRVDPRFVVMKLRYGVRVFVPRSGTGFDVDLTTVLQAGEQRPVTVRRFDETLTPRGDPKGLRGVFAPTGTEVMTAERRVNPEPVRLAASLQSGRAAVGVAAFEAADLSSPLAGLLGGSGWLLCPPDDLARTLVALRRLRSAHRAPDGAVPDPARIIAFGVDPAALTEPKVLASAGQPVEFALPLLDEDGQAHAPRAWRDLPLVDDVSLQGLRRRIGATAGQSAARRLFAAAFAHLLVNPDESALAADTGSPQRGGRSAVMTMLQEIGRAFAGRPDLIVTVTAELAEQQSVLAARDSAKMLDELAAVLRPLPAERRIVIDVMRLVRRERIRPETRRMLLAETLPAIGVLTGCWGDVWQITAVGLTELTEALERVAATGQVLARAPRLDRDAVVSLAVAGAAPAVVRCAPLLPVDLIRELTERARVTPEVLRGGTSPVSGRPGSGIVHRIELLARAGADAVPGLTEDEVRRFVLDGGVDGGVDGGVDGGVEGGVEEGATASAEDVSAPVADPRAAFADTLVVARDPDWIPDWCAALAAAGGLAADEVRDRAIEENLLAGPGPVPPSRWDPDIARCLAERWETTSLAELIELGRVLAAGDLLWIRSVAVTVGVSVSEVVDAALAQRLLGQARPPSPSDWSHADVASYLTERWTAVPLVALLDVARDLTRSSVGWLRAVADAAAVPVSSAIDRAVAEGVLGEASPTDAALPPLIAGYVAARWDERSLRDIMATVRVLVDGDLEWLRSFGAALGANPGDLVDEAVTAGLHQADPPPDPVWWADPRVVAFARSRWGVLPLDTLLKIVRCLAVEDIVWTTQFAELVAADPSTVIETAFQENLLGRPGMSAWAVALLDDDVVGLYLSRRWGIHPLAETLNRASLIGAARDWLVRLARMSGQDVADVLDTAIAEGVLRRGAPSAPPSLEGVSAPYLAAHWGTMPLPRLLVEAARAARGESDPTGPLTTGPAGPATTGSSGSSGSSGRVAGSSASFAAEVASLVALDPATVAATCGARLVRVAAALHGAPRLVSALGALDPPARAWLLAVADLLPAGAAEVDLAVAATTDDPVAVVGLALEHGISVTEAAAAAACLGRVPEADRPVLAPLGGLLARIPVAVLATLASLDLEPAVRRALADVEQAHPGAVDVVARHGASAATIVTGPRSQAMISLLQRIEPTPGLVPWILTAGPEAAVAVATAGPGVIDVAARAADAWRRGDVTGPLAAIKAAWEATGPTDRVWPVPAAGVSRRGDNLIRLAITVYPLAARGRSASEILSILAR
>NC_007777.1|WP_082456771.1|4043701_4045042_-|threonine--tRNA-ligase
MPRGEETTVYDHRKLGRELELFDTDPLIGSGLPYWLPAGAVVRHTLEEYIRGVERRAGYRHVYSPVLGKRELYEISGHWSHYRDDMFPPMDLSGERLGGERLGGERLGGERLGGERLGGEQMVLRPSLCPHHALIYRSRAHSYRDLPLRMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCAPEQVADEARAALELIREAYGALGVSPARYRLSLPGPGGKYVGDPGMWRRSAALLTEVLDAAGVAYEAVEGEAAFYGPKIDVQIVDSAGREATLSTVQIDFHQPERFDLRYAGPDGAMRRPVMVHRSVIGSVERAVAHLIESHGGAFPPWLAPVQLVALPISDAEVPHALALVRQAADRGLRAEAAGPQRGTLGARVRAARLVPYQAIIGAREAADERVSLRLRDGRRLEARPAAEVLAGIDLLTSAHSTDLWTDPRGQAGGR
>NC_007777.1|WP_157858569.1|4042319_4043345_-|hypothetical-protein
MDGIAADRAVRWRRLRDSLAADGADGATLGALDEVVASLGPQNAALAACAADGRVVWCHRLRRQVADRAVWGSLPCTLPMLAYRQSSVPCVVVLTDRTGADLRVAGDGLRFAGEVVGSDDEIERNAPGGWSQRRYQDRAEDSWDHNAAQVAEAVTELTERVDAALVVLAGDARAVQLLRKHLPPRVTPLVHQLEHGGRHPGRSDRFHSQEVRELVEAEVRDRTRAVLDRFAEDRAHGRAIDGVPATLAALVRAQVGTLLVVDDPGDDRAAWYGPEPGDVATEPGALARLARRAGSPPTTGRLADLAVRAAWGTGAAVRVLPADLPGAPTDGLGALLRYPSP
>NC_007777.1|WP_011437785.1|4040631_4041969_+|GNAT-family-N-acetyltransferase
MPIWHIRPYETVDYAATVRLLEEVRSTPGGPPINLTDTVLALRHELPETESPAVVAVAGEHLVGAAVGRKEGGQGRVLTVAIAPAWRHHGIGSSLLQSVENLLLHAGCRRITTLITPGQPGEEAFLNRGFTATGQVLYDKQIPLRPADVSTVERWGGALLSASEWSNLAGMEEERALIEKRLLLPVRERELAEAYGVVIPTAMLLFGPPGTGKTSFARAVAARLEWPFVELLPSRLASGGSGLAAELRSAINDLMGVERVVVFIDEVDEIAQSRETRPENQSVVNELLKAIPQFRGVQGRLLICATNAVSALDPAFIRPGRFDLVLPVGPPDAKGRRVLLDGLLDRVANKEDIDLDAVVAATDLFTPADLSAVVQRSAAAAFHRAADGVKVGTGAGAESGGGGHGPTVTPLSTQDLLDAARLARPTISLTELDRFRRDAEAFTRI
>NC_007777.1|WP_011437784.1|4038702_4040217_-|DUF839-domain-containing-protein
MSELTRRNLFRHGTAAGAVVVLSAEAFNLLAASPVGAATGGYGPLVADPAGKLDLPAGFHYKVIAKAGTWGQAPYNEPFDRLDDPGSPPYPTKFDGTGSFPGTQGGTILVQNHEQDAVNPGAQFTPVVPKTTGAAVYDGSATNAFGGTTNIVLDVNANVQRRYVSLAGTIRNCAGGVTPWGAWLTCEETESIISGGKRHGYVFEVDSLGRRTTGAPLTALGRFAHEAVAVDPKTNFAYLTEDASGPNGLLYRFRPTRATGQFGDYAAGGCLEALQAWTAAGNPIDDLSQITKVGTSLTVKWVPVLAPDPDGTDASPSIRKQFAYPGRPATLAAASPDRVTRSKKFEGAFWARDAAWINASYAKKADLPASVSYPALPPTVHDGQVWKYQPAAETLTLVALLPSHEAADDYDTPGVFDGPDNLCITPHGGALLCEDGDGLNYVVGLDRQGSPFAFAQNKILFQDGADKIYREFVGSCFSTNGRYLFVATQDPGIAYAVTGPWHTV
>NC_007777.1|WP_011437783.1|4037244_4038513_+|deferrochelatase/peroxidase-EfeB
MSPGSDGGRMGRRSFLAGAFAAGAAAAGSATTVAAGTGAAVLTTAAPAAAAASGSSDEVVPFHGVHQAGILTPQPAAAMFASFDVIADDRAALTDLFKTITARARFLTAGGAPADLGTVAPPSDSGVLGPTVPPDALTVTVGVGASLFDGRFGLADRRPRRLAPMRTFPNDNLNPADCHGDLSLQLCANSRDTVLHALRDIARHTRGGMQLRWRIDGFHSQPRPAGAQRNLLGFKDGIVNPDVTSAADMDRLVWVDGAGEPRWTTGGSYQVVRIIRMLVEFWDRVSLNEQETMIGRRRDTGAPLDGTAETDIPNYARDPKGTAIPLTAHIRLANPRTAATDNSRILRRGFNYDRGTDSNGNLDMGLVFCCYQQDIIRQFEATQTRLIDEPLVDYISPTGGGYFFVLPGVRDASDHLGRSLLA
>NC_007777.1|WP_011437782.1|4035139_4037248_+|FTR1-family-protein
MWGDVLPNLLIGLREGLEAGLIVSILVATLVRADERSRLPLVWTGVLAAIALSASFGAVLTFAAASMSTAAQEVFSGSLSLVAVGFVTVMIFWMRRSARALSGEIKGKVTAALALGPGVLILTAFLAVAREGVETSLFIWTTTRGASESAGPLIGAAAGLLIAAGLCVGMYYRAVKINLTKFFTFTGIGLIVVASGVAGYGLRDLQEAGALPGFDTVLFDLRTTFDPSSWYARLVEGVFNITPRMTALQVTGYLAYLVVVLALFVRGTRAPQPAQPAQPGEPAAVPAAKSSDRTPAPTPLTPPPAPTGASAGHRLPRWALPAAIVAVPALAAGATILALGPSSSGGSGGTIEVTGGSCAAGWAAPRSGRQTFTVHNSSAQTAEVRLIDPATGAIHAEIELLAPGTTRTLSATIGGGTYAWECLPDGGKRLLSASQRVAGAASGAASILPVTAETMSGPLRGYRAFVTVGLVTLQGSVDTLRADVEHGDLDAARRDWLPAHLDYERLGAAYGTFGDFDSKINGLPAGLPGGVHDPDFTGFYRIEYGLWHGESAASLAASAVGLSSDVAGLRAAFPTQEFDPNDLALRTHEVLENTLQFQLTGAADQGSGTALATASANVDGTRELLTVIAPVLQTRSPAALTAARQQLGAFGALVRRVGNPHGTWIPPGRLPLADRQKLNGSLGALLETLAPIPDILEIRSTG
>NC_007777.1|WP_023841517.1|4057493_4058081_+|hypothetical-protein
MSEFNSRRAQRQVPARRSNPLQKLARDRARQARRRTRRDQPLPDYLARYASGPDGHPRSASTTMGKPRPSGNSLKHLRPVPWTSLGPATVLDARVDFSDCAGYKRRPVVAVRVENGVILAFPITTQVRRLSWVCGRLLAFPREAGLREAQSAILWRPVAIERSDVIRVLGRLIGSDLEEFQIHARAVRGVDGSDA
>NC_007777.1|WP_023841518.1|4058179_4058887_+|hypothetical-protein
MRLRFLVDDRVEFDQRLRRSDQLCVGAAPDDVCDDAASHRHLSASPPDRKLSRRAARLSAAPGGGWNVEIANLNQADVRNWGQPTYPVEQGGLVSVTDRPTAVWLRGTPQRSYLLLCEPEPTGVRRIARDRRVTESNEVDRLSEKETEAIRVVFEQHLRWPPLRNPDPRPKKSAADRLGIKQTSLNDRLAGALEKARRVGYQPPGGQVAPTRDADWVYWLVGIGALDFEMHAGIG
>NC_007777.1|WP_082456772.1|4059276_4060290_+|alpha/beta-fold-hydrolase
MVISVERRVAVAAGPEHLELHVEELRPEGFPLDDPPPEIPWSPAPPPPGHLRADGRPPNEARAPNETRIADRTQIADETRTMTSDDRPATIRGGGGDIPVLLLHGIAGSTADWAAVVPELATSRRVIAYDQRGHGASGWATTGRAGYSFDQLVADLATVVDVLGLPAVHLIGHSMGGVVALRYTLNHPGRVRSLVLADTAAAPATGTGGITKRVVSVLLAGAAAIATAVHAGRNRAVAGLGRMDPNAIVALWRDLSSYPSLTDRLGEICAPTTVIVGERDFSLRDAAETLARSVPDAHLAVIAGADHNPHASRPIAWLTAVEDHLTRADQIATDLIR
>NC_007777.1|WP_011437795.1|4060597_4061644_+|aldo/keto-reductase
MKYRKLARTGVEVSTQCLGAMMFGAFGNTDHDECERIIHRALDAGINFLDTADIYSQGESEEIVGRAIKTRRDDVVLATKCFSPMGDERNSRGGSRRWIIRAVEDSLRRLGTDYIDLYQVHRHDWDTDLEDTLGALSDLVHAGKVRYLGSSSFPADWIVEAQWAARRRNSERFVCEQPQYSIFARSIEEAVLPAAQRHTIGIIPWSPLAGGWLTGKYRRGEQAPAGSRYSSQGLLGRRQGQALSEDPHAPARFTVVEELTTLAKQAGVSLTHLALAFVDSHPAVTSTIIGPKTLTQLDDVLLAAEITLDQATLDAIDEIVTPGTDIAGTNHHSGNPALRPSCRRRTAH
>NC_007777.1|WP_035733690.1|4061938_4062127_+|hypothetical-protein
MHHRFLAGHGQVIILDEWDSTEAFQEFFTNQPEIAALMRDAGVEGPPEIQVWQPIEGAPDTF
>NC_007777.1|WP_011437797.1|4062258_4062696_-|SsgA-family-sporulation/cell-division-regulator
MLRHSSTPAHVVARDLSVDYVTEEGEREAIPGTLRYDPADPFAVELILRPGEEAITWIFARALLAEGIEVPAGTGDVRIRPTRSKGQTVITVSLSSPSGHADLELAKSKVTAFLADCHGQVPAGRESNGIDWNNELHMLLRTRNT
>NC_007777.1|WP_011437798.1|4063070_4065767_-|protein-kinase
MSHPPGRSGPADGPADRAASEPTEVGPYRLVRRLGAGGMGTVYLGENAAGGLVAVKLIRADLARLAEFRSRLKQEADNARRVARFCTAAVLDVDITADPPYLVTEYVDGPTLSEAVGTRGPLTPAELHQLAVSMTTALMAIHRAGLVHRDLKPSNILLSRLGPKVIDFGIARALDSATVLSGDRQLGTPAFMAPEQALGEQVTSAADVFAWGGVLIFAGTGRYPFGNGPAPSVLYRTVNDPPTLDGFEDSLRPLVSDAMRKAAAERPTAEKLYARLLDLRVEAPMAVKGLSLSEVTALIRPLNTSPGGASGTSASDADLAGPITPVTGHQPIGPPPPANLISFPGPGIPGAPARSGPSSVPGPSSVPGPSSVPGPTSSPGLGSSSSGSEASPSGPDARWLPGAGSSSRSRDFADALVTVWTEDEHSQDPGRGASPSSSSSSSQRSSSSQRSSSSSRRSSSAAPPGDRARNRRPLIIVALVAAVTVLVTTVAIVSTRGGGSRTEMSVPEAVAERALLLQDGDTGLARRLALAAYRAEPHSARTRSAMIALFGAGITPTTIPVGTGALLALAVSPDGHWIAAGSNNGTVTLWEVVGRTELVRRTSVSVPSRSWIESLAFNRDGGLLAAGHSDGTIRLWNLHDPDQMVRWSTIQAHTDAVQSVAFSPDSNTLGSASADGIVALWDVTDPARPKQRVRADGQTGGVRSMAFAPNGTLLAFAGEDGTVHLWNIRDAARPTAGGILRGHSRGVRSVVFTGDGGVLVSGGVDATVRLWEVRYPDNPARGVATGSLGGIQSVAFEPGADVVASAGDDETVRLTDISRLDTPILLTQWHGHTQPISAIAFVSGTGVVVSAGHDGTLRLWDAEPGRLADTACADPANRITAGEWSTAFRDMGYRAPCG
>NC_007777.1|WP_049761114.1|4065879_4066473_-|hypothetical-protein
MRAATLDCPAGRRLCPGGLAVPLDEQCAAPTPSRCPKGTVRVLGVCTPVSEPGVSEPDVGKPDVGEPVAREARPGELLFDRSAVTAGDTLFARGAGCRPGSQAVLTAGGELVGRTVADQDGTFETVVQFASFRPGYRPVTAACGANLSAGIDMVLVSADTSASPSSVLLPLFLALSFLAVHYQMAARGRRRARSQRR
>NC_007777.1|WP_139140041.1|4066930_4067542_+|hypothetical-protein
MLGGQVGPCWSQGPPALRVAAAGQVGELDVQRPPASVVVPDGQLVALGSEWGDGVPLGVSGFGAGFGMGGRDGEVDGSGDVDGGMDRVGDGSGDGDADGSGDGDADRVGAGDGDGSGDGGMDRDGEMDSDDVPVDVPGLTIAVATPAPLTKKNTTTNTVDTRPRDGRGTNRPDTRWPDTRAPPRVRLATRPLPAACPGPAETT
>NC_007777.1|WP_049761115.1|4067836_4068406_+|hypothetical-protein
MVSVQNLTRSNVPVDSVRLSGTVLGLTFFDYDTRVRTTIPARGSANWTVDLDVRDLDGRATGLMPVEVAIRGADLHTVARVAGTADIHGSLLSIYGLFGLGLVVLMGLLWAVALLPLGRHAVPATWWQRGLRFVPAGCGVGLFVIFALSATRLLSPGIPSDFGITITATAVCFGLGALLPQLVPTTRRG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_007777_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007777_13

4110195-4110283

Orphan

Consensus_repeat	Method
TCCCTCCAGGGATGATCAGCGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007777_13

>merge|NC_007777|13|4110195-4110283|CRISPRCasFinder
TCCCTCCAGGGATGATCAGCGACATCTTGATGTGCCGGACCGGCCGCGGTGGTACCGGTGTTGCGATCCCTCCAGGGATGATCAGCGAC

>NC_007777|13|12|4110195-4110283|CRISPRCasFinder
TCCCTCCAGGGATGATCAGCGAC	ATCTTGATGTGCCGGACCGGCCGCGGTGGTACCGGTGTTGCGA
TCCCTCCAGGGATGATCAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007777.1\|WP_035958387.1\|4122261_4124082_+\|endoglucanase	unknown	unknown	gnl\|CDD\|226609
NC_007777.1\|WP_011437838.1\|4124422_4125346_-\|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase	unknown	unknown	gnl\|CDD\|274584
NC_007777.1\|WP_011437825.1\|4098093_4098960_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NC_007777.1\|WP_035958893.1\|4102262_4106384_+\|ATP-dependent-RNA-helicase-HrpA	unknown	unknown	gnl\|CDD\|182986
NC_007777.1\|WP_011437820.1\|4092311_4093301_-\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|235468
NC_007777.1\|WP_011437824.1\|4096595_4096832_-\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NC_007777.1\|WP_011437832.1\|4113556_4114048_+\|redox-sensitive-transcriptional-activator-SoxR	unknown	unknown	gnl\|CDD\|133385
NC_007777.1\|WP_011437836.1\|4120716_4121733_+\|TerD-family-protein	unknown	unknown	gnl\|CDD\|349398
NC_007777.1\|WP_035731572.1\|4124156_4124363_-\|DUF1918-domain-containing-protein	unknown	unknown	gnl\|CDD\|378101
NC_007777.1\|WP_011437828.1\|4106415_4109586_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|379328
NC_007777.1\|WP_108913834.1\|4114206_4114926_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NC_007777.1\|WP_011437834.1\|4115136_4116393_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380564
NC_007777.1\|WP_139168522.1\|4099094_4101746_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NC_007777.1\|WP_011437822.1\|4094976_4095447_-\|heme-binding-protein	unknown	unknown	gnl\|CDD\|377163
NC_007777.1\|WP_108913531.1\|4093510_4094695_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380564
NC_007777.1\|WP_148214939.1\|4116417_4117158_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213191
NC_007777.1\|WP_011437829.1\|4109604_4110120_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237171
NC_007777.1\|WP_011437823.1\|4095636_4096410_-\|hypothetical-protein	unknown	unknown	unknown
NC_007777.1\|WP_011437830.1\|4110715_4112038_-\|galactokinase	unknown	unknown	gnl\|CDD\|179937
NC_007777.1\|WP_011437831.1\|4112104_4113322_-\|UDP-glucose--hexose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|236963

Protein	Function_ID	Function_description	E-value
NC_007777.1\|WP_035958387.1\|4122261_4124082_+\|endoglucanase	gnl\|CDD\|226609	COG4124, ManB, Beta-mannanase [Carbohydrate transport and metabolism].	1.12344e-09
NC_007777.1\|WP_011437838.1\|4124422_4125346_-\|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase	gnl\|CDD\|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	1.51746e-106
NC_007777.1\|WP_011437825.1\|4098093_4098960_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	4.63645e-09
NC_007777.1\|WP_035958893.1\|4102262_4106384_+\|ATP-dependent-RNA-helicase-HrpA	gnl\|CDD\|182986	PRK11131, PRK11131, ATP-dependent RNA helicase HrpA; Provisional.	0
NC_007777.1\|WP_011437820.1\|4092311_4093301_-\|malate-dehydrogenase	gnl\|CDD\|235468	PRK05442, PRK05442, malate dehydrogenase; Provisional.	0
NC_007777.1\|WP_011437824.1\|4096595_4096832_-\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	7.705e-20
NC_007777.1\|WP_011437832.1\|4113556_4114048_+\|redox-sensitive-transcriptional-activator-SoxR	gnl\|CDD\|133385	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator. Helix-turn-helix (HTH) transcriptional regulator SoxR. The global regulator, SoxR, up-regulates gene expression of another transcription activator, SoxS, which directly stimulates the oxidative stress regulon genes in E. coli. The soxRS response renders the bacterial cell resistant to superoxide-generating agents, macrophage-generated nitric oxide, organic solvents, and antibiotics. The SoxR proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the unusually long spacer between the -35 and -10 promoter elements. They also harbor a regulatory C-terminal domain containing an iron-sulfur center.	7.25484e-74
NC_007777.1\|WP_011437836.1\|4120716_4121733_+\|TerD-family-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	9.78602e-48
NC_007777.1\|WP_035731572.1\|4124156_4124363_-\|DUF1918-domain-containing-protein	gnl\|CDD\|378101	pfam08940, DUF1918, Domain of unknown function (DUF1918). This domain, found in various hypothetical bacterial proteins, has no known function.	7.34326e-17
NC_007777.1\|WP_011437828.1\|4106415_4109586_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	2.0116e-22
NC_007777.1\|WP_108913834.1\|4114206_4114926_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	6.69362e-26
NC_007777.1\|WP_011437834.1\|4115136_4116393_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380564	cd06341, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in transport of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in transport of amino acids, peptides, or inorganic ions. Members of this group are sequence-similar to members of the family of ABC-type hydrophobic amino acid transporters such as leucine-isoleucine-valine binding protein (LIVBP); however their ligand specificity has not been determined experimentally.	8.57389e-29
NC_007777.1\|WP_139168522.1\|4099094_4101746_-\|histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.85739e-11
NC_007777.1\|WP_011437822.1\|4094976_4095447_-\|heme-binding-protein	gnl\|CDD\|377163	pfam03928, Haem_degrading, Haem-degrading. Haem_bdg is a bacterial protein that is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein.	5.17405e-21
NC_007777.1\|WP_108913531.1\|4093510_4094695_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380564	cd06341, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in transport of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in transport of amino acids, peptides, or inorganic ions. Members of this group are sequence-similar to members of the family of ABC-type hydrophobic amino acid transporters such as leucine-isoleucine-valine binding protein (LIVBP); however their ligand specificity has not been determined experimentally.	5.50078e-116
NC_007777.1\|WP_148214939.1\|4116417_4117158_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213191	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter. LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.	1.88879e-85
NC_007777.1\|WP_011437829.1\|4109604_4110120_-\|hypothetical-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	0.0050133
NC_007777.1\|WP_011437830.1\|4110715_4112038_-\|galactokinase	gnl\|CDD\|179937	PRK05101, PRK05101, galactokinase; Provisional.	6.80158e-108
NC_007777.1\|WP_011437831.1\|4112104_4113322_-\|UDP-glucose--hexose-1-phosphate-uridylyltransferase	gnl\|CDD\|236963	PRK11720, PRK11720, UDP-glucose--hexose-1-phosphate uridylyltransferase.	0

>NC_007777.1|WP_011437829.1|4109604_4110120_-|hypothetical-protein
MSEETADPSGEPAAEREPGARSPAGREPSGQPAPDAEPGPDADAGADEAGATFAGRFDFRPVDWDGSFSRVWRARHGQELTNELAAEQERRENRKWFERYRQELLDRMDAESAREAARRRAEDRERAVAEGGRPARGAADEALLRKLELLDRFPPVDPGDPDEPAGPADPR
>NC_007777.1|WP_011437828.1|4106415_4109586_+|tetratricopeptide-repeat-protein
MTGGGDGHGAPDCFVSYADDGRAWAEWIAGTLEDAGYQVLLESWAPAGTHRVGWLDRAVSQARHTIAVVSDGYLRSSPAVAEWAAAWSADPTGGERRLLVTRVADRPLPGLLGQLVPVDLFDRSEIAVRASLLAALRGDRPQPEQPPGFPGRRGIFPPELPAVWNVPDQPARFVGRTAALARLDEALSRSPLVTVTGIAGIGKTSLVTEYVRQHRADLDAVWWVPAERPELIGERVRELAPAVGLPGHAEPAAVIANLGRADGRWLIVLDDAADADTLPDWLRPTEPGRLLLTSRNPGWDHLGPVVPVGPMDRAESVTLLAGRLPAVERTVADRIAERLGDHPLALDQAAHRISTGRTPAETYLQVLIDRPEVLLAQGEVSGRPGATAATLWDEPIRRLDAEAPAAGHLLRIVAHGDNEPIPIRLFTAEPDVIPDSGLRAAAGDPLALADTVGVLERYGLAHRDADTVTMHRLVRAAVHTHTGPDQADEIVATMARMLRASLPDAVTANPEAWPAWRELLPHTLAVLDATATDSTDADSTDADGPEADGPEADGPEAAWLAERSAAYLLGQGRADQALPLAARALAARERLDGPVHVDTLACRETLARVALGAGRIDAAGRLAEHTVADRERILGPEHPDTLVSRDTLAQLFQKVGQTDRAVEMFQRTLATRERILGPEHPDTLEGRHSLGRAYDAAGRDDEAARLLRDTLADQRRILGPEHPATLDTRHSLAVAYRRIGAVGDAVPLFEQTLAARERVLGPEHPAALGTRHQLAVTHHQAGRLDDATREFGRALTGRERTLGPDHPDTLETVDGLARAHLYAGRLDDAAREFGRALTGRERALGPDHPETTETRESLATAHLRLGRPGEAVPHLERALDRHEHVLGRAHPYTVEARNALATTYRRTGQLEAAVPLLERLLADRSRAHGVGDARTLRTADGLAEVYRTTGRLPQAVGLNERVLAVRERLLGPGHPDTRATRGALADTYRQAGRPADAVPLYRAALTDALREHGPFHPDSTRARRTLADTVGETRHDQPPPLERPIPVEPRFRHRDP
>NC_007777.1|WP_035958893.1|4102262_4106384_+|ATP-dependent-RNA-helicase-HrpA
MPPAGPVPPAELSARLTGLSPRDAHRLGRRLAESRRTREPAARQRALQAIAAEVDRASLRLERRRASVPTLDYPDILPVTQRKDEILAAIRDHQVVVVAGETGSGKTTQLPKICLELGRGVRAMIGHTQPRRIAARTVADRIAEELRTPAPQMGGVVGYQTRFTDQVHENTLVKLMTDGILLAEISSDRQLRRYDTLIIDEAHERSLNIDFILGYLRSLLPRRPDLKIVITSATIETARFSAHFAGAPVIEVSGRTYPVEVRYRPLVPAASGPAGGPASGPASGPADARRTGRENGEAERDQTQAISEAVDELCAEGPGDILVFLSGEREIRDTAEALTREQRPNTEIVPLYARLSAGEQHRVFQPHTGRRVVLATNVAETSLTVPGIHYVIDPGTARISRYSHRTKVQRLPIEPISQASANQRKGRCGRTADGICIRLYSEEDFAGRPEFTDPEILRTNLASVILRMADLGLGEMATFGFLDPPDPRQISDGELLLAELGAFDATASDPRHRITPLGRRLAQIPVDPRLARMVLAADEQGCLREVLVIAAALAIQDPRERPVEHQQAADARHARFADPTSDFLAYLNLWNYLRDARGELSANQFRRMCRTEFLNYLRIREWQDVHGQLAAVVRGLGLTPRDDSSGAADPRTVHRALLTGLLSHIGRYDPERREYAGARGGRFALWPGSVLARRSNRAERTGPTATSANPAAALADPGDPAGEDAPKRPSGPPAWVMAAELVETSRLWGRTAARIDPDWIEPLAAHLVHRTYSEPRWSRRQGAVLADEKVTLYGVTIVASRPVQYSRIDPVLCRELFLRHALVEGDWQTRHTFFHANRELLADVEELEHRARRRDIVVDDETLFHFYDERVPADIVSARHFDAWWRKARRTTPDLLDFPRSMLVTADATGITEADYPDVWQAGDLALPLSYQFEPGSAADGVTVHIPLAVLNQVGAEGFEWQVPGLREELVTALIRALPKAVRRSFVPAPNYAKAVLANITPRQAPLLTAVEHELRRMGGPEIPRDSWSLAGVPDHLRFTFRVEDAGGRVLAEGKDLDAIKERLRPRTREAVAAAADGLERAGLRAWGDLGTLPKVVELRRGGNVAGGHVVKAFPALVDEGGSVAVRAADTEAEQRQLMWAGTRRLVLLGVPSPVRGLNARLSNAAKLALSHNPHRDAADLLDDCVRAAADRLIAAAGGPAWDEAGFTALLAAVRAGLPEAAFEVVREVQQVLGLAHAVDLALRELRAPAVAASVADARDQLISLIYRGFVTDTGADRLADLVRYLTALERRLERLPRDPGRDRLNTATVGRVQDAYRELLATVPAGREPAPEIRRLRWMIEELRVSLFAQSLRTPYPVSEERVYRAIDAILG
>NC_007777.1|WP_139168522.1|4099094_4101746_-|histidine-kinase
MRSRPPPWSGRPPRAGQGVTADGREAASSGVREAVPSVAPATVPTVASASASASAGTVTAFGEGALELGRASVELGRAYQALEQVMGRVLVTLRAVAVLLTVCYVAVWRWYDHRPAAMAVAGLTAIGGLVFCVVGLRRGIRRSMTTVTVAMSAVLALTASSWLPPASVGDSGNFVFLTAINAGIVTVWTFPTAVASVLLLTLCGATLVGGWGHNPQVFSQTAMLLIIPGLLGLAIGRLRRIARTADQRWANVAARHRSEAVVLAVARDRRERERVIHDTVLNTLTGIAWGGGRDVELTRRRCAQSLTAVRGLLDRDDEVGPPIGERLAEVVRDATRRGLQVSLDDQRLPAIAGEPPGEPPAVVVEAFVGAVGEALVNVERHAGTRRASLLLGGGPGLLIVTVSDAGCGFDPRRVDSARLGLRESIVGRLVDVAGTARIDARPGQGTVVELQWRAPDATTGHVTRPHPSDDRDDRGDRDDHGAGRAGGRVADRRDVAAIAAELRDAYAAGLRRALGQIAGLWLIIMLVPLVGTGGWVRTMAGAGALWLLVAVLTVVFVRRGRSRPISGPEAAVLLFLAVAVAVAGIANTVGADIVRIADWPLLVLPLLLAFITASRPLWEWVGALLVAIAMMIVAVFLRGSTESLVLARLGVLIYGACGVQIVTAMLGPLLRGTAETTARALAAEAEVAAQVDASTMIRWERAQWLRTVGWEVLPLLDGVAGGWLDPREAAVRSRCAMRAAAVRRMITGGGPSSALADLDVVVADAEAAGMTVQIQLSGDLRLAPAPVRAMVADQVREVLAAVPGGRAIVTVLWTPAGGSVFVSLPWPQGLPPPQLGRGGEDAGGIEVAVELDDRCLSLELTWPAASAVTDPTGRVESIGGLAE
>NC_007777.1|WP_011437825.1|4098093_4098960_+|helix-turn-helix-domain-containing-protein
MTTAQPGSGPTVRRILLGSQLRRLREEKGISRETAGYHIRASESKISRMELGRVSFKERDVADLLTFYQVTDDAERAPLLALVREANAAGWWQNFNDVLPSWFQPYIGLEEAAQLIRTYELQFIPGLLQTEDYARAIITQGSGGLPVDVIERRVSVRLNRQKLLCRKDPPRLWIVIDEAALRRPIGGPKVMRAQLEHLIAVSELPNLTLQVMPFAFGGHAAEGGAFTILRFPEMDLPDVVYLEQLTGSAYLDKREDVDRYMEVYNRLSVDSTTPGDTAELLRRIITEL
>NC_007777.1|WP_011437824.1|4096595_4096832_-|DUF397-domain-containing-protein
MTKIYSGMSAAALQRVTWQKSRRSNSQGNCVEMAKLPGDEVAVRNSRHPNGPALVYTRAEIEALILGAKDGDFDNLLQ
>NC_007777.1|WP_011437823.1|4095636_4096410_-|hypothetical-protein
MPTSIPERIFSSEDLPLLSLPGADGLITCQWIHESMRVRTPSGRGCDAIRGCDAIEERRRAQVGFVLVEPAWLVRAAAERLRAPGVDAIVLHAQASPPGRSALALAFASHLRNALRRPGAGGTPAPGGPPGSGSEPEVGDNVVTAGVRPDLSGFADLIRVPHLVTVTDGTGAVADTVVWEIMTGARFDTWLDGAPRPDQRAIEAHLPGLLRLRGLHRVGRLDHPGAGALLDLLGGGYLSSRLIHRCPRAVLPLVAAT
>NC_007777.1|WP_011437822.1|4094976_4095447_-|heme-binding-protein
MTVSLEDARRIIAAGEKYAVHLGQPVNIAVVDHAGILVAHVRMDNARLETADISVDKACAARAWAPPAHLVSHTGGEGHAGGEAHAGGEAHAGGEAPATGDGRVGRERPSPAEPVVTGLPGALPLWRNGVIVGAVGVSGGPAPLDQAIARAAAAAF
>NC_007777.1|WP_108913531.1|4093510_4094695_-|ABC-transporter-substrate-binding-protein
MIGLGAVGCRVSTDGPTASPACAAPGVAPDAIRFGLLYPDTGNAASLFRSFRAGVDARLGVADKAGGVYGRKVVYVWRDDASNPAGNQAAARGLVENDQVFGIIESTSVASGSAGYLNSRRIPVTGTSLEAAWTHNDNMFSYSNMIFDGPSVTTWGEFVAERGGHRAIIAQSGFSATSVTLADKMALSLAAAGVRVLGRIDATGPIDIPGIGRKVRDSGADVLVGAVTGAAFGQVVLGARAARADLRVILSPTGYDQRLLQLFGGVLAGVYSFVDYLPFEQETPAHQRFLQAMLEYAPQVSPPAQQAALSGWISADMFLRGLVAAGPCPSRETFIRGLRAVRGYDADGLLPVPVNFATHFGQINRCYTFLQVTADAKRFALVPPVPRCGTEIGR
>NC_007777.1|WP_011437820.1|4092311_4093301_-|malate-dehydrogenase
MSSTPVNVTVTGAAGQIGYALLFRIASGQLLGADTPVKLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIKKITIWGNHSATQYPDIFHAEVGGRSGAEAVGDQAWIADEFIPRVAKRGAEIIEVRGASSAASAASAAIDHIFTWVNGTPAGDWTSAAIPSDGSYGVPEGLISSFPVTASGGRFEIVQGLELDAFSREKIDASVRELAEEREAVRALGLI
>NC_007777.1|WP_011437830.1|4110715_4112038_-|galactokinase
MRAAEYPATEHPATERAVRAFVETYGERPTHLVRAPARVNLIGEHTDYNDGFCLPVAIDRELCIALRRNEAPELRLVSEQDAVPAVIPLPPPGFDTPVSARAPGWVRYVEGIAVMLAAESASRAAAGSGGSRAAAGSGFPAGGGPVPWRGTLASDIPVGAGLSSSAALELAVALAGAHLAGLTPAPTELALLAQRAENLWVGAATGLLDQLACAAGVAGHALRIDCRTLTTEPVPLPGGLAVVVIDTGSRRQVVTSEYATRRAECERAARALGVAALRDLTPRSMDEAVARLGRSARSDGTTRPGGAAGGTGLDPVALRRARFVVAENARVDAVAAALRAGDAPTAGRLLLAGHRGIREDFEVSGPELDAAVQAASAAPGCFGARMTGGGFAGCAVALVDRSRLTAFTEAFEPAYAALTGRWAVLHVCSAVAGTSVLDLG
>NC_007777.1|WP_011437831.1|4112104_4113322_-|UDP-glucose--hexose-1-phosphate-uridylyltransferase
MAGFVAMDDITHRRFNPLTGRWVLVSPGRTRRPWHGGQEPPPVPAAVAHDPLCDLCPGNLRAGGERNPSYSGTYVFTNDFPALRPDPVRPAALLVAPPADPPVAPSADPAPVWPAGPGSGLLRSEPARGTCRVVCFGPRHDRGLVDMTPAEVRAVVDTWAAQEEELSRTWRWVQVFENRGTAMGASNPHPHGQIWACDALPDEPAAEDARQREHFARSGSSLLMDYAEIETAAGERVILAEEHWLVVVPFWALWPFETLLLPRHPVDRLAALSDDQRDGLSRLLGRLLTGYDALFDHPFPFSMGWHGAPGPHPAPGPRPGPELGSEPEPESGLGPDLDPGWGPGDPPAAFWQLHAHFYPPLLRSPTIRKHQVGYEMLADVQRDLTPEAAADRLRAVMAPVAANRT
>NC_007777.1|WP_011437832.1|4113556_4114048_+|redox-sensitive-transcriptional-activator-SoxR
MLPTDMMTVGELSQRSGFAASALRFYEQQGLLTATRTSGGQRRYERHVLRRLAFIRAATAVGLSLDEVRETLSTLPESRTPTKADWSAISRRWRGRLDDEIAALVALRDGLNSCIGCGCLSLRSCRISNPHDRIAELGPGARALPAALRRTRNPLDRCGQPVR
>NC_007777.1|WP_108913834.1|4114206_4114926_+|NAD(P)H-dependent-oxidoreductase
MFQPGASNGEPRSGRSQTVGTDPVSGLPSRVSAHRSPDMPPDGPGPVRARRRRPLIVGIGGSSRANSTTHQALATVLAMMGQAGAETMLLGAADLDLPMYAPERQERPAAALRLLAAVERADGLVIATPGYHGGISGQVKNALDYLEDLRGAPRPYLDGRAVALIVGARGTQAAGTTLTALRSTVHALRGWPTPLGVTLNTAVPLFDPHGRVLDRTVAARLDTLADQIMGFTYAWSQVL
>NC_007777.1|WP_011437834.1|4115136_4116393_+|ABC-transporter-substrate-binding-protein
MGRRYGLRWLAAAVLGAVLAGTLAACGGDSDGEATGTSSAGSTVKLMIIAPVGTSGTNYPEMVAAARAAVRGVNARGGIAGHRVELVHCNEKNDAAVARKCAQQAVDQHVLAVVGEVSGSGGIMPILENAGIPSIGSAGISADGSELSSPISYVISPLALYPAVCPSLLAKAGATRLGLVGYDLSASDRLIIMAEGGAKAVNRPINPKIRIPITTSDFTPAISQLTRSGADGAVLVVFDQAAYAVISQAGQRVRTCHAAGTLSPKYLSTLGPAADNLVVATAFPELSQAGQFPEVARMISELDAEQAGGDADAAPALRTTTTTTGAWLSVQIAEKVGNKVSGPLTARTLLDQLNRTTDLDLGGIVPRLNLTATTPIPGAERIFNTTLRGARWDSASKSFVPLGPETYSGLDILRRAAS
>NC_007777.1|WP_148214939.1|4116417_4117158_-|ABC-transporter-ATP-binding-protein
MLAARGLSAGYGNGPVVRDLNLEVHAGEVVTLLGPNGAGKTTTLLALAGAIPSAGGEVLLAGAVTTAALHERCRRGLSLVPEERSVIMDLTVRENLRVGRCDPDLALAVFPELAEHLDRRAGLLSGGQQQMVTLARALARRPTVLLADELSLGLAPRVVDRLLAAVRAAADDGLAVILVEQHVRSALSIADRVHVLRHGALAWSGTAAQARADRETLLGAYLSPGRPADSGNGAPSGNGALSGPRA
>NC_007777.1|WP_011437836.1|4120716_4121733_+|TerD-family-protein
MRDLVPGANGPLPAGPVSVRLAGPFDVCALVTGANGKVAADSDFVFYNQPRAPGVALSGGAVTVDPGRLRLGAERVVIAASPEDGTTPFGRLPALAVTIHNDHDDLIARFAPPPLSRETVVTLVEIYRRGPAWKIRAVGQGYADGLAGLARDFGVDIDDGDQGDQGHQGHQGHQGHQGHQGHQGHQGQGQRRDPPGYPDSTGRGTREGDLTLVLARVVTLTNAERAREGLAPLTVDDRLAAAAEAHSVDMATRGFFAHTSPEGRTVSDRVSALGYRYAQVAENIAAGQSSADEVVTGWMNSPGHRANILIPRLRQIGVGQATGGEYGRYWTQVFGTLL
>NC_007777.1|WP_035958387.1|4122261_4124082_+|endoglucanase
MTGALTGPARAQAPTIIEDSAIGTGLNQVSYTGTWTRCTGCIAGPLDDGFRYSSTYGSVASFQFIGTRVTIFGVKGPWSGQAAISIDGSTPQLVDTFATVAVASSIFTSNTLTAGTHTVQITNLHQRNAASRGYDVAFDRAEAINEVAPPPPTPPVPTALTIEDTTIGTGTNQVSYSTGWTKCTGCITSPNNSFYYSATAGAVATIRFSGTQINIYGAKGPIGGFSTIRLDGGQPVNVDTYAPTSSITLFYSSDKLAAGTHTLTLTNTGQRNTSSQGNNVGFDRAEVTTGANPPPAPPSYAGPRSGKGWLTGTYPDPVMNQQNLEAFCTWRGAPCDFTLLYTTRNSWANVSQPVDLLRTFANWPGRLIISIPPFPEHIGASNATCATGAYDEYWKTFGRVLNAYGRQNSYLRIAWEGNGDWYEWSATNPKDYVNCWRHVADAINSTAEPDPTLCWCLNAHYSQNPPSHNPMDMYPGDAWVDGVGLDAYDHWPPSRTKAEFDAQANAPGGLNYWFNFARAHNKLFGVGEWGVVSTSGNNGGGDNANYIQWMYDWFVAHAGKGLAYEYYFNNCDPNNVGSNLYRPLSATCLYLNRQAGARYKQLYSGQ
>NC_007777.1|WP_035731572.1|4124156_4124363_-|DUF1918-domain-containing-protein
MYARVGDRLVVRNSATGRTERHGVILKIRGESGRAPFIVRWDDGRESWYIPAAYESVELRPSRDRRPG
>NC_007777.1|WP_011437838.1|4124422_4125346_-|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase
MPVTQGSGALPARRIVFVHAHPDDETIATGATMACYAADPDTQVVLVTCTLGEMGEVLVPELTNLRADRADQLGGYRIGELEQACTELGVTDYRFLGGAGRWRDSGMLDSPANDDPRCFWRANMDDASEALVRIVREVRPQVIVTYDAIGDYGHPDHIRAHDVTVRAFADAADPDFAPDAGPTWQVSKLYETALSHSAVESAVDRIWRSDLAKTVPEGITMPSDMLLSVPDTKVTTTIEAPGFFAAKIAAMRAHRSQMTVDGFFFALVDGNGRSAKATENFVLARGAVGPGSGSGVETDLFDGVATR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_007777_10	10.7\|3971695\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971695-3971729	35	NC_007777.1	2885421-2885455	0	1.0

1. spacer 10.7|3971695|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to position: 2885421-2885455, mismatch: 0, identity: 1.0

ctggtcgcctacgtggtgcccgccgagggggagag	CRISPR spacer
ctggtcgcctacgtggtgcccgccgagggggagag	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_007777_1	1.20\|33346\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33346-33378	33	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	325641-325673	6	0.818
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	31140-31172	6	0.818
NC_007777_1	1.33\|34140\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	34140-34172	33	NC_019408	Caulobacter phage CcrRogue, complete genome	143496-143528	6	0.818
NC_007777_1	1.38\|34445\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	34445-34477	33	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	732138-732170	6	0.818
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	MG925347	Microbacterium phage Lucky3, complete genome	7291-7324	6	0.824
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	MG925343	Microbacterium phage Golden, complete genome	7291-7324	6	0.824
NC_007777_1	1.10\|32738\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	32738-32770	33	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	411383-411415	7	0.788
NC_007777_1	1.10\|32738\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	32738-32770	33	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	21485-21517	7	0.788
NC_007777_1	1.10\|32738\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	32738-32770	33	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	203734-203766	7	0.788
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	136446-136478	7	0.788
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	127241-127273	7	0.788
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	136450-136482	7	0.788
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	136380-136412	7	0.788
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	136378-136410	7	0.788
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1865944-1865976	7	0.788
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1872687-1872719	7	0.788
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1844597-1844629	7	0.788
NC_007777_1	1.30\|33957\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33957-33989	33	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	205850-205882	7	0.788
NC_007777_1	1.38\|34445\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	34445-34477	33	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	329858-329890	7	0.788
NC_007777_1	1.38\|34445\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	34445-34477	33	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	99105-99137	7	0.788
NC_007777_9	9.3\|3904954\|36\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3904954-3904989	36	NZ_CP021373	Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence	9065-9100	7	0.806
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP033968	Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed1, complete sequence	46307-46340	7	0.794
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP037902	Cupriavidus metallidurans strain BS1 plasmid p1, complete sequence	344466-344499	7	0.794
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP050105	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence	484665-484698	7	0.794
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	388870-388903	7	0.794
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP050110	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence	484667-484700	7	0.794
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	320304-320337	7	0.794
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	248774-248807	7	0.794
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	388857-388890	7	0.794
NC_007777_11	11.2\|4015583\|33\|NC_007777\|CRISPRCasFinder	4015583-4015615	33	NC_041927	Sphingobium phage Lacusarx, complete genome	91202-91234	7	0.788
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NC_041927	Sphingobium phage Lacusarx, complete genome	91202-91233	7	0.781
NC_007777_1	1.4\|32372\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	32372-32404	33	NZ_LN868940	Nocardia farcinica strain NCTC11134 plasmid 3, complete sequence	13441-13473	8	0.758
NC_007777_1	1.6\|32494\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	32494-32526	33	NC_021278	Mycobacteroides abscessus subsp. bolletii 50594 plasmid 1, complete sequence	111844-111876	8	0.758
NC_007777_1	1.18\|33224\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33224-33256	33	NZ_CP054033	Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence	252631-252663	8	0.758
NC_007777_1	1.29\|33896\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33896-33928	33	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	216023-216055	8	0.758
NC_007777_1	1.36\|34323\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	34323-34355	33	NZ_CP054033	Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence	252631-252663	8	0.758
NC_007777_9	9.6\|3905174\|37\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905174-3905210	37	NC_047992	Microbacterium phage Zeta1847, complete genome	44273-44309	8	0.784
NC_007777_9	9.7\|3905248\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905248-3905281	34	NZ_CP021373	Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence	9059-9092	8	0.765
NC_007777_9	9.7\|3905248\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905248-3905281	34	NZ_CP013381	Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence	101265-101298	8	0.765
NC_007777_9	9.7\|3905248\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905248-3905281	34	NZ_CP009547	Burkholderia sp. 2002721687 plasmid pBTU, complete sequence	16592-16625	8	0.765
NC_007777_9	9.7\|3905248\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905248-3905281	34	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	58015-58048	8	0.765
NC_007777_10	10.1\|3971262\|36\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971262-3971297	36	MH271318	Gordonia phage Trine, complete genome	38670-38705	8	0.778
NC_007777_10	10.7\|3971695\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971695-3971729	35	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	356929-356963	8	0.771
NC_007777_10	10.7\|3971695\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971695-3971729	35	NZ_CP010990	Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence	60238-60272	8	0.771
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	433733-433766	8	0.765
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	50264-50300	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	50539-50575	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	117801-117837	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1297908-1297944	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	190329-190365	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	1416956-1416992	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	963962-963998	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1006418-1006454	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	259916-259952	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	50307-50343	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	50264-50300	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	8461-8497	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	8461-8497	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1250723-1250759	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	8440-8476	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	8456-8492	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	274559-274595	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	338408-338444	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	260509-260545	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1572664-1572700	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	797249-797285	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	161942-161978	8	0.784
NC_007777_10	10.15\|3972279\|37\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972279-3972315	37	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	8455-8491	8	0.784
NC_007777_10	10.17\|3972424\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972424-3972458	35	MH588547	Caulobacter phage CcrSC, complete genome	173297-173331	8	0.771
NC_007777_10	10.20\|3972644\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972644-3972677	34	NC_041927	Sphingobium phage Lacusarx, complete genome	91201-91234	8	0.765
NC_007777_10	10.20\|3972644\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972644-3972677	34	NC_022599	Micrococcus sp. V7 plasmid pLMV7, complete sequence	79531-79564	8	0.765
NC_007777_11	11.2\|4015583\|33\|NC_007777\|CRISPRCasFinder	4015583-4015615	33	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	489432-489464	8	0.758
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NC_015178	Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence	181753-181784	8	0.75
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	489433-489464	8	0.75
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NZ_CP009825	Xylella fastidiosa strain J1a12 plasmid pXF51-J1, complete sequence	7869-7900	8	0.75
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NC_002490	Xylella fastidiosa 9a5c plasmid pXF51, complete sequence	7867-7898	8	0.75
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NZ_CP009791	Xylella fastidiosa strain U24d plasmid pXF51ud, complete sequence	7867-7898	8	0.75
NC_007777_1	1.4\|32372\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	32372-32404	33	MH155880	Streptomyces phage SendItCS, complete genome	40037-40069	9	0.727
NC_007777_1	1.9\|32677\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	32677-32709	33	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	254499-254531	9	0.727
NC_007777_1	1.10\|32738\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	32738-32770	33	MK279848	Gordonia phage Dorito, complete genome	12950-12982	9	0.727
NC_007777_1	1.16\|33102\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33102-33134	33	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	193540-193572	9	0.727
NC_007777_1	1.20\|33346\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33346-33378	33	NZ_CP020810	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence	69496-69528	9	0.727
NC_007777_1	1.22\|33468\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33468-33500	33	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	36892-36924	9	0.727
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	554133-554165	9	0.727
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	494400-494432	9	0.727
NC_007777_1	1.34\|34201\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	34201-34233	33	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	193540-193572	9	0.727
NC_007777_9	9.2\|3904882\|35\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3904882-3904916	35	NZ_CP054600	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed1, complete sequence	60917-60951	9	0.743
NC_007777_9	9.7\|3905248\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905248-3905281	34	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1462608-1462641	9	0.735
NC_007777_9	9.7\|3905248\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905248-3905281	34	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1751812-1751845	9	0.735
NC_007777_10	10.6\|3971623\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971623-3971657	35	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4968443-4968477	9	0.743
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NC_017833	Streptomyces sp. FR1 plasmid pFP4, complete sequence	16332-16365	9	0.735
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NC_006552	Pseudomonas phage F116, complete genome	24580-24613	9	0.735
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	AY625898	Pseudomonas aeruginosa phage F116, complete genome	24580-24613	9	0.735
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	LT603684	Pseudomonas phage phiC725A genome assembly	24911-24944	9	0.735
NC_007777_10	10.20\|3972644\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972644-3972677	34	NC_015178	Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence	181752-181785	9	0.735
NC_007777_10	10.20\|3972644\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972644-3972677	34	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	489432-489465	9	0.735
NC_007777_11	11.2\|4015583\|33\|NC_007777\|CRISPRCasFinder	4015583-4015615	33	NC_015178	Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence	181752-181784	9	0.727
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NC_022599	Micrococcus sp. V7 plasmid pLMV7, complete sequence	79532-79563	9	0.719
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	18633-18664	9	0.719
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1530817-1530848	9	0.719
NC_007777_1	1.18\|33224\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33224-33256	33	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	156490-156522	10	0.697
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	357086-357118	10	0.697
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	270285-270317	10	0.697
NC_007777_1	1.36\|34323\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	34323-34355	33	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	156490-156522	10	0.697
NC_007777_9	9.10\|3905462\|36\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905462-3905497	36	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	1371871-1371906	10	0.722
NC_007777_9	9.11\|3905535\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905535-3905568	34	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	851246-851279	10	0.706
NC_007777_9	9.11\|3905535\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905535-3905568	34	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	198890-198923	10	0.706
NC_007777_9	9.11\|3905535\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905535-3905568	34	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	148337-148370	10	0.706
NC_007777_9	9.11\|3905535\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905535-3905568	34	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	753004-753037	10	0.706
NC_007777_9	9.11\|3905535\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905535-3905568	34	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	202767-202800	10	0.706
NC_007777_9	9.11\|3905535\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905535-3905568	34	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	148338-148371	10	0.706
NC_007777_9	9.11\|3905535\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905535-3905568	34	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	752993-753026	10	0.706
NC_007777_9	9.11\|3905535\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905535-3905568	34	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	202756-202789	10	0.706
NC_007777_10	10.6\|3971623\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971623-3971657	35	MF377441	Arthrobacter phage Timinator, complete genome	15795-15829	10	0.714
NC_007777_10	10.6\|3971623\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971623-3971657	35	KU647629	Arthrobacter phage BarretLemon, complete genome	15796-15830	10	0.714
NC_007777_10	10.6\|3971623\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971623-3971657	35	MH825703	Arthrobacter phage LeeroyJ, complete genome	15795-15829	10	0.714
NC_007777_10	10.7\|3971695\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971695-3971729	35	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1613823-1613857	10	0.714
NC_007777_10	10.7\|3971695\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971695-3971729	35	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	199291-199325	10	0.714
NC_007777_10	10.14\|3972208\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972208-3972241	34	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	477800-477833	10	0.706
NC_007777_10	10.16\|3972353\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972353-3972386	34	NZ_CP007214	Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence	136433-136466	10	0.706
NC_007777_10	10.16\|3972353\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972353-3972386	34	NZ_CP049906	Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence	674047-674080	10	0.706
NC_007777_10	10.20\|3972644\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972644-3972677	34	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	366462-366495	10	0.706
NC_007777_10	10.20\|3972644\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972644-3972677	34	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	487454-487487	10	0.706
NC_007777_11	11.2\|4015583\|33\|NC_007777\|CRISPRCasFinder	4015583-4015615	33	NC_022599	Micrococcus sp. V7 plasmid pLMV7, complete sequence	79532-79564	10	0.697
NC_007777_11	11.2\|4015583\|33\|NC_007777\|CRISPRCasFinder	4015583-4015615	33	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	366462-366494	10	0.697
NC_007777_11	11.2\|4015583\|33\|NC_007777\|CRISPRCasFinder	4015583-4015615	33	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	487454-487486	10	0.697
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	366463-366494	10	0.688
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	487455-487486	10	0.688
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	179748-179779	10	0.688
NC_007777_11	11.4\|4015603\|32\|NC_007777\|PILER-CR	4015603-4015634	32	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	399343-399374	10	0.688
NC_007777_1	1.23\|33529\|33\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	33529-33561	33	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	758552-758584	11	0.667
NC_007777_9	9.7\|3905248\|34\|NC_007777\|CRISPRCasFinder,CRT,PILER-CR	3905248-3905281	34	MF975638	Streptomyces phage Abt2graduatex2, complete genome	23189-23222	11	0.676
NC_007777_10	10.6\|3971623\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971623-3971657	35	NZ_CP039909	Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence	34206-34240	11	0.686
NC_007777_10	10.7\|3971695\|35\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3971695-3971729	35	NZ_CP011667	Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence	84081-84115	11	0.686
NC_007777_10	10.16\|3972353\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972353-3972386	34	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	49566-49599	11	0.676
NC_007777_10	10.20\|3972644\|34\|NC_007777\|PILER-CR,CRISPRCasFinder,CRT	3972644-3972677	34	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	179747-179780	11	0.676
NC_007777_11	11.2\|4015583\|33\|NC_007777\|CRISPRCasFinder	4015583-4015615	33	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	179747-179779	11	0.667

1. spacer 1.20|33346|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.818

cagatcggaccggccggctggggct--cccaccgc	CRISPR spacer
cagatcggaccggacggctgggcctgggccgcc--	Protospacer
************* ******** **   **.**

2. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.818

gcctggcccggcccggccgcggggtcgggatga--	CRISPR spacer
acctggtccggcccggccgcggcgtc--gatggcc	Protospacer
.*****.*************** ***  ****.

3. spacer 1.33|34140|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_019408 (Caulobacter phage CcrRogue, complete genome) position: , mismatch: 6, identity: 0.818

cctacaccatggacgacgtcaacgctatggctg-	CRISPR spacer
cctacaccatcgacgacgtcatcggc-tggatgc	Protospacer
********** ********** ** . *** **

4. spacer 1.38|34445|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 6, identity: 0.818

catccaggaaggagcagaccgtga-ccgtcgagc	CRISPR spacer
catccaggagggagcagaccgtggcccggtggg-	Protospacer
*********.*************. *** .*.*

5. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to MG925347 (Microbacterium phage Lucky3, complete genome) position: , mismatch: 6, identity: 0.824

accagctcctcggcgccggggatgtcc--gctggga	CRISPR spacer
cgcagctcctcggagccgggggtgtccttgctgg--	Protospacer
  *********** *******.*****  *****

6. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to MG925343 (Microbacterium phage Golden, complete genome) position: , mismatch: 6, identity: 0.824

accagctcctcggcgccggggatgtcc--gctggga	CRISPR spacer
cgcagctcctcggagccgggggtgtccttgctgg--	Protospacer
  *********** *******.*****  *****

7. spacer 1.10|32738|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 7, identity: 0.788

ggtctcgtgcattccgatcgcggccgcggcggc	CRISPR spacer
cgttgggggcaatccgatcgcagccgcggcggc	Protospacer
 **.  * *** *********.***********

8. spacer 1.10|32738|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

ggtctcgtgcattccgatcgcggccgcggcggc	CRISPR spacer
cgttgggggcaatccgatcgcagccgcggcggc	Protospacer
 **.  * *** *********.***********

9. spacer 1.10|32738|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

ggtctcgtgcattccgatcgcggccgcggcggc	CRISPR spacer
cgttgggggcaatccgatcgcagccgcggcggc	Protospacer
 **.  * *** *********.***********

10. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
tccgcgccgggccccgccgcggggtcgggatcg	Protospacer
 **  *** ***** **************** .

11. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 7, identity: 0.788

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
tccgcgccgggccccgccgcggggtcgggatcg	Protospacer
 **  *** ***** **************** .

12. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
tccgcgccgggccccgccgcggggtcgggatcg	Protospacer
 **  *** ***** **************** .

13. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.788

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
tccgcgccgggccccgccgcggggtcgggatcg	Protospacer
 **  *** ***** **************** .

14. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
tccgcgccgggccccgccgcggggtcgggatcg	Protospacer
 **  *** ***** **************** .

15. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
tccgcgccgggccccgccgcggggtcgggatcg	Protospacer
 **  *** ***** **************** .

16. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
tccgcgccgggccccgccgcggggtcgggatcg	Protospacer
 **  *** ***** **************** .

17. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.788

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
tccgcgccgggccccgccgcggggtcgggatcg	Protospacer
 **  *** ***** **************** .

18. spacer 1.30|33957|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 7, identity: 0.788

ccgtgcccgttcccgggcgatccgcgcgcgcat	CRISPR spacer
gcaatcgccttcctgggcgatccgcgcgcgcat	Protospacer
 *.  * * ****.*******************

19. spacer 1.38|34445|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.788

catccaggaaggagcagaccgtgaccgtcgagc	CRISPR spacer
cgccgccgaaggagcagaccgtcaacgtcgagc	Protospacer
*..*   *************** * ********

20. spacer 1.38|34445|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.788

catccaggaaggagcagaccgtgaccgtcgagc	CRISPR spacer
cgccgccgaaggagcagaccgtcaacgtcgagc	Protospacer
*..*   *************** * ********

21. spacer 9.3|3904954|36|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 7, identity: 0.806

gacgacctggtgctgatctgcaccaacggcaccgcc-	CRISPR spacer
accgacctgatgctgatctgctccaacgtc-tcgccg	Protospacer
. *******.*********** ****** * .****

22. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033968 (Cupriavidus pauculus strain FDAARGOS_614 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

accagctcctcggcgccggggatgtccgctggga	CRISPR spacer
ggcagcacctcggcgccggggatggccgcagcca	Protospacer
. **** ***************** **** *  *

23. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037902 (Cupriavidus metallidurans strain BS1 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.794

accagctcctcggcgccggggatgtccgctggga	CRISPR spacer
ggcagcacctcggcgccggggatggccgcagcca	Protospacer
. **** ***************** **** *  *

24. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 7, identity: 0.794

accagctcctcggcgccggggatgt-ccgctggga	CRISPR spacer
gccagctcctcggcgccggcgatgtatcgatcag-	Protospacer
.****************** ***** .** * .*

25. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 7, identity: 0.794

accagctcctcggcgccggggatgt-ccgctggga	CRISPR spacer
gccagctcctcggcgccggcgatgtatcgatcag-	Protospacer
.****************** ***** .** * .*

26. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 7, identity: 0.794

accagctcctcggcgccggggatgt-ccgctggga	CRISPR spacer
gccagctcctcggcgccggcgatgtatcgatcag-	Protospacer
.****************** ***** .** * .*

27. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.794

accagctcctcggcgccggggatgt-ccgctggga	CRISPR spacer
gccagctcctcggcgccggcgatgtatcgatcag-	Protospacer
.****************** ***** .** * .*

28. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 7, identity: 0.794

accagctcctcggcgccggggatgt-ccgctggga	CRISPR spacer
gccagctcctcggcgccggcgatgtatcgatcag-	Protospacer
.****************** ***** .** * .*

29. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 7, identity: 0.794

accagctcctcggcgccggggatgt-ccgctggga	CRISPR spacer
gccagctcctcggcgccggcgatgtatcgatcag-	Protospacer
.****************** ***** .** * .*

30. spacer 11.2|4015583|33|NC_007777|CRISPRCasFinder matches to NC_041927 (Sphingobium phage Lacusarx, complete genome) position: , mismatch: 7, identity: 0.788

tactccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
tcagtcggcaccgagaccgtcgcgatcatcacg	Protospacer
*   .**************.***** ******.

31. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NC_041927 (Sphingobium phage Lacusarx, complete genome) position: , mismatch: 7, identity: 0.781

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
cagtcggcaccgagaccgtcgcgatcatcacg	Protospacer
   .**************.***** ******.

32. spacer 1.4|32372|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN868940 (Nocardia farcinica strain NCTC11134 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.758

ctcggcccagcccatccgctcgatggcgcagcg	CRISPR spacer
gacatcccagcccatgcgctcgatcgcgcacct	Protospacer
  *. ********** ******** ***** *

33. spacer 1.6|32494|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_021278 (Mycobacteroides abscessus subsp. bolletii 50594 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

cggctctacgccctgcaccacgtcgacatcgcc	CRISPR spacer
cgcgccgcggccctgcaccacgtcgacgtcccc	Protospacer
**  .*   ******************.** **

34. spacer 1.18|33224|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 8, identity: 0.758

ttgagatggacgccgaccacacggcgcggatcg	CRISPR spacer
ttgagatggacgccgagcacgcggctgtggcgg	Protospacer
**************** ***.****   *.. *

35. spacer 1.29|33896|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 8, identity: 0.758

cccgtcgtcgctgaccgcgcccaacttcgcggc	CRISPR spacer
cgccgccctgctgagcgcgcccaacgtcgcggc	Protospacer
* *  * ..***** ********** *******

36. spacer 1.36|34323|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 8, identity: 0.758

ttgagatggacgccgaccacacggcgcggatcg	CRISPR spacer
ttgagatggacgccgagcacgcggctgtggcgg	Protospacer
**************** ***.****   *.. *

37. spacer 9.6|3905174|37|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NC_047992 (Microbacterium phage Zeta1847, complete genome) position: , mismatch: 8, identity: 0.784

ctgggacacggcccggatcctcgccgagcgcaacgcc	CRISPR spacer
caagctcatcgcccgcatcctcgccgagcgcaccgcc	Protospacer
* .*  **. ***** **************** ****

38. spacer 9.7|3905248|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 8, identity: 0.765

gatggtgacgacctggtgctgatctgcaccaacg	CRISPR spacer
ctgggcaccgacctgatgctgatctgctccaacg	Protospacer
   **.. *******.*********** ******

39. spacer 9.7|3905248|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013381 (Burkholderia sp. Bp5365 strain MSMB43 plasmid pMSMB43, complete sequence) position: , mismatch: 8, identity: 0.765

gatggtgacgacctggtgctgatctgcaccaacg	CRISPR spacer
gacgcacttgacctgttggtgatctgcaccaacg	Protospacer
**.*    .****** ** ***************

40. spacer 9.7|3905248|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009547 (Burkholderia sp. 2002721687 plasmid pBTU, complete sequence) position: , mismatch: 8, identity: 0.765

gatggtgacgacctggtgctgatctgcaccaacg	CRISPR spacer
gacgcacttgacctgttggtgatctgcaccaacg	Protospacer
**.*    .****** ** ***************

41. spacer 9.7|3905248|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 8, identity: 0.765

gatggtgacgacctggtgctgatctgcaccaacg	CRISPR spacer
gccggagcggacctgcttctgatctgcaccaaca	Protospacer
* .** *  ****** * ***************.

42. spacer 10.1|3971262|36|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to MH271318 (Gordonia phage Trine, complete genome) position: , mismatch: 8, identity: 0.778

ctcgaagc--cgtcctcggcggcctcggcgcactggcc	CRISPR spacer
--gggagcaacggcctcggcggcctcggcgcgctggta	Protospacer
   *.***  ** ******************.****.

43. spacer 10.7|3971695|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

ctggtcgcctacgtggtgcccgccgagggggagag	CRISPR spacer
ctcgtcgcgtacgtggtgcccgccgccggcgcccg	Protospacer
** ***** ****************  ** *   *

44. spacer 10.7|3971695|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010990 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence) position: , mismatch: 8, identity: 0.771

ctggtcgcctacgtggtgcccgccgagggggagag	CRISPR spacer
ctggtcgcccacgtagtgcccgccggcgacgacgg	Protospacer
*********.****.**********. *. ** .*

45. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 8, identity: 0.765

accagctcctcggcgccggggatgtccgctggga----	CRISPR spacer
tccagccccttggcgccggggatgt----tgagatcca	Protospacer
 *****.***.**************    **.**

46. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

47. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

48. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

49. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

50. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 8, identity: 0.784

gacagctccgagatcggcccgctcggggaccggccgg	CRISPR spacer
gacgacgacgagatcggcccgcgcggcgaccggcacg	Protospacer
***..*  ************** *** *******  *

51. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

52. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

53. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

54. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccggaccg	Protospacer
 **. .* *************** ** ******* * *

55. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccggaccg	Protospacer
 **. .* *************** ** ******* * *

56. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

57. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

58. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggctg	Protospacer
 **. .* *************** ** ******* * *

59. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

60. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

61. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

62. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

63. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

64. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

65. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

66. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

67. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggctg	Protospacer
 **. .* *************** ** ******* * *

68. spacer 10.15|3972279|37|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.784

gacagct-ccgagatcggcccgctcggggaccggccgg	CRISPR spacer
-acgcttgccgagatcggcccgcgcgtggaccgggccg	Protospacer
 **. .* *************** ** ******* * *

69. spacer 10.17|3972424|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to MH588547 (Caulobacter phage CcrSC, complete genome) position: , mismatch: 8, identity: 0.771

----acctcgtggcagcaggtccaggactacgtcgagca	CRISPR spacer
gagagcc----gccagcaggtccaggactatgtcgatca	Protospacer
    .**    * *****************.***** **

70. spacer 10.20|3972644|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_041927 (Sphingobium phage Lacusarx, complete genome) position: , mismatch: 8, identity: 0.765

tactccggcaccgagaccgccgcgaacatcacag	CRISPR spacer
tcagtcggcaccgagaccgtcgcgatcatcacgc	Protospacer
*   .**************.***** ******.

71. spacer 10.20|3972644|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_022599 (Micrococcus sp. V7 plasmid pLMV7, complete sequence) position: , mismatch: 8, identity: 0.765

tactccggcaccgagaccgccgcgaacatcacag-	CRISPR spacer
gtctccggcaccgtgaccgccgcggac-ccggagc	Protospacer
  *********** **********.** .*. **

72. spacer 11.2|4015583|33|NC_007777|CRISPRCasFinder matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 8, identity: 0.758

tactccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
tgcaccggcaccgagaccgccgagatcaccggc	Protospacer
*.* ****************** ** **.*.

73. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 8, identity: 0.75

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
tgaccggcaccgagaccgccgcgttcatcggc	Protospacer
   ********************  ****.

74. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 8, identity: 0.75

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
gcaccggcaccgagaccgccgagatcaccggc	Protospacer
.* ****************** ** **.*.

75. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NZ_CP009825 (Xylella fastidiosa strain J1a12 plasmid pXF51-J1, complete sequence) position: , mismatch: 8, identity: 0.75

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
cctatgtcaacgacaccgccgcgaacatcatt	Protospacer
 ** .* ** *** ****************.

76. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NC_002490 (Xylella fastidiosa 9a5c plasmid pXF51, complete sequence) position: , mismatch: 8, identity: 0.75

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
cctatgtcaacgacaccgccgcgaacatcatt	Protospacer
 ** .* ** *** ****************.

77. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NZ_CP009791 (Xylella fastidiosa strain U24d plasmid pXF51ud, complete sequence) position: , mismatch: 8, identity: 0.75

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
cctatgtcaacgacaccgccgcgaacatcatt	Protospacer
 ** .* ** *** ****************.

78. spacer 1.4|32372|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to MH155880 (Streptomyces phage SendItCS, complete genome) position: , mismatch: 9, identity: 0.727

ctcggcccagcccatccgctcgatggcgcagcg	CRISPR spacer
gttctcccagaccatccgctcgatggcgccctt	Protospacer
 *.  ***** ******************  .

79. spacer 1.9|32677|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 9, identity: 0.727

ggttcccgagcatcgaccgggcggcctgcgacc	CRISPR spacer
gcagcccgagcatcatccgggcggcctgaacac	Protospacer
*   **********. ************ .  *

80. spacer 1.10|32738|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to MK279848 (Gordonia phage Dorito, complete genome) position: , mismatch: 9, identity: 0.727

ggtctcgtgcattccgatcgcggccgcggcggc	CRISPR spacer
cgccgtctgcattcccatcgcggtcgcggcgat	Protospacer
 *.* . ******** *******.*******..

81. spacer 1.16|33102|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgggtgaagaaagccgcgcgcaatcgcattc	CRISPR spacer
cccccaaaaagcacgccgcgcgcaatcgcattc	Protospacer
..*  . .*** * *******************

82. spacer 1.20|33346|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020810 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cagatcggaccggccggctggggctcccaccgc	CRISPR spacer
gccagtggaccggccgcctgggactcccacacc	Protospacer
   * .********** *****.*******  *

83. spacer 1.22|33468|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ggacgagattgcggcgatcggaaacgagatcgt	CRISPR spacer
agcttcgattgcggcgatcgaaaacaagatctc	Protospacer
.* .  **************.****.***** .

84. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 9, identity: 0.727

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
acgtggccgggcccggcagcggggtcgatgcca	Protospacer
.* ***** ******** *********. .. *

85. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 9, identity: 0.727

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
acgtggccgggcccggcagcggggtcgatgcca	Protospacer
.* ***** ******** *********. .. *

86. spacer 1.34|34201|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgggtgaagaaagccgcgcgcaatcgcattc	CRISPR spacer
cccccaaaaagcacgccgcgcgcaatcgcattc	Protospacer
..*  . .*** * *******************

87. spacer 9.2|3904882|35|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054600 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

tggtgggcgaggtgggcctgcgccagcgtcaggtt	CRISPR spacer
gtccagcccagttgcgcctgcgccagcgtcaggtt	Protospacer
   ..* * ** ** ********************

88. spacer 9.7|3905248|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.735

gatggtgacgacctggtgctgatctgcaccaacg	CRISPR spacer
tgcggcaccgacctggggctgatccgcaccaagg	Protospacer
 ..**.. ******** *******.******* *

89. spacer 9.7|3905248|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

gatggtgacgacctggtgctgatctgcaccaacg	CRISPR spacer
tgcggcaccgacctggggctgatccgcaccaagg	Protospacer
 ..**.. ******** *******.******* *

90. spacer 10.6|3971623|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.743

gccctggaagtcgacgagatcgacgctgccgcggc	CRISPR spacer
gacgactacttcgacgagatctacgctgccgcagc	Protospacer
* *    *  *********** **********.**

91. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_017833 (Streptomyces sp. FR1 plasmid pFP4, complete sequence) position: , mismatch: 9, identity: 0.735

accagctcctcggcgccggggatgtccgctggga	CRISPR spacer
accagctcctcggggccgggtatgtcgccccatt	Protospacer
************* ****** *****  *. .

92. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_006552 (Pseudomonas phage F116, complete genome) position: , mismatch: 9, identity: 0.735

accagctcctcggcgccggggatgtccgctggga	CRISPR spacer
atcttctcctcggcgccggagaagtccgcgcgct	Protospacer
*.*  **************.** ******  *

93. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to AY625898 (Pseudomonas aeruginosa phage F116, complete genome) position: , mismatch: 9, identity: 0.735

accagctcctcggcgccggggatgtccgctggga	CRISPR spacer
atcttctcctcggcgccggagaagtccgcgcgct	Protospacer
*.*  **************.** ******  *

94. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to LT603684 (Pseudomonas phage phiC725A genome assembly) position: , mismatch: 9, identity: 0.735

accagctcctcggcgccggggatgtccgctggga	CRISPR spacer
atcttctcctcggcgccggagaagtccgcgcgct	Protospacer
*.*  **************.** ******  *

95. spacer 10.20|3972644|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 9, identity: 0.735

tactccggcaccgagaccgccgcgaacatcacag	CRISPR spacer
ctgaccggcaccgagaccgccgcgttcatcggcg	Protospacer
.   ********************  ****.  *

96. spacer 10.20|3972644|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 9, identity: 0.735

tactccggcaccgagaccgccgcgaacatcacag	CRISPR spacer
tgcaccggcaccgagaccgccgagatcaccggca	Protospacer
*.* ****************** ** **.*.  .

97. spacer 11.2|4015583|33|NC_007777|CRISPRCasFinder matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 9, identity: 0.727

tactccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
ctgaccggcaccgagaccgccgcgttcatcggc	Protospacer
.   ********************  ****.

98. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NC_022599 (Micrococcus sp. V7 plasmid pLMV7, complete sequence) position: , mismatch: 9, identity: 0.719

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
tctccggcaccgtgaccgccgcggacccggag	Protospacer
 *********** **********.** . . .

99. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
tgatcagcaccgagaccgccgcggtcatcccc	Protospacer
   .*.*****************. **** *

100. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
actccggcaccgagcccgcggcgccggcctga	Protospacer
************** **** ***   ..*  *

101. spacer 1.18|33224|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 10, identity: 0.697

ttgagatggacgccgaccacacggcgcggatcg	CRISPR spacer
cctgcccgcaccccgaccacacggcgccgatcg	Protospacer
.. .  .* ** *************** *****

102. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
agctggcccggcccggccggggcgtcccggctg	Protospacer
. ***************** ** ***  *.. .

103. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 10, identity: 0.697

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
ctcatgcccggcacggccgcggggttgggcgtg	Protospacer
 .*  ******* ************.***   .

104. spacer 1.36|34323|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 10, identity: 0.697

ttgagatggacgccgaccacacggcgcggatcg	CRISPR spacer
cctgcccgcaccccgaccacacggcgccgatcg	Protospacer
.. .  .* ** *************** *****

105. spacer 9.10|3905462|36|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

ccccggccggcgctcaccgtcgccgcctggtcctat	CRISPR spacer
gaccgcccggcgctcaccgacgccgcctggaaacgc	Protospacer
  *** ************* **********   ...

106. spacer 9.11|3905535|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgaacaccagctggttggagccacgcgggta	CRISPR spacer
cgtcgaagacgagctggttggagccacggccgcc	Protospacer
.  **** ** *****************   *.

107. spacer 9.11|3905535|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgaacaccagctggttggagccacgcgggta	CRISPR spacer
cgtcgaagacgagctggttggagccacggccgcc	Protospacer
.  **** ** *****************   *.

108. spacer 9.11|3905535|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgaacaccagctggttggagccacgcgggta	CRISPR spacer
cgtcgaagacgagctggttggagccacggccgcc	Protospacer
.  **** ** *****************   *.

109. spacer 9.11|3905535|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgaacaccagctggttggagccacgcgggta	CRISPR spacer
cgtcgaagacgagctggttggagccacggccgcc	Protospacer
.  **** ** *****************   *.

110. spacer 9.11|3905535|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgaacaccagctggttggagccacgcgggta	CRISPR spacer
cgtcgaagacgagctggttggagccacggccgcc	Protospacer
.  **** ** *****************   *.

111. spacer 9.11|3905535|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgaacaccagctggttggagccacgcgggta	CRISPR spacer
cgtcgaagacgagctggttggagccacggccgcc	Protospacer
.  **** ** *****************   *.

112. spacer 9.11|3905535|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgaacaccagctggttggagccacgcgggta	CRISPR spacer
cgtcgaagacgagctggttggagccacggccgcc	Protospacer
.  **** ** *****************   *.

113. spacer 9.11|3905535|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

tcgcgaacaccagctggttggagccacgcgggta	CRISPR spacer
cgtcgaagacgagctggttggagccacggccgcc	Protospacer
.  **** ** *****************   *.

114. spacer 10.6|3971623|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to MF377441 (Arthrobacter phage Timinator, complete genome) position: , mismatch: 10, identity: 0.714

gccctggaagtcgacgagatcgacgctgccgcggc	CRISPR spacer
cttcaggaagtcgacgagatcgacgaagccgtcaa	Protospacer
 ..* ********************  ****. .

115. spacer 10.6|3971623|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to KU647629 (Arthrobacter phage BarretLemon, complete genome) position: , mismatch: 10, identity: 0.714

gccctggaagtcgacgagatcgacgctgccgcggc	CRISPR spacer
cttcaggaagtcgacgagatcgacgaagccgtcaa	Protospacer
 ..* ********************  ****. .

116. spacer 10.6|3971623|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to MH825703 (Arthrobacter phage LeeroyJ, complete genome) position: , mismatch: 10, identity: 0.714

gccctggaagtcgacgagatcgacgctgccgcggc	CRISPR spacer
cttcaggaagtcgacgagatcgacgaagccgtcaa	Protospacer
 ..* ********************  ****. .

117. spacer 10.7|3971695|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.714

ctggtcgcctacgtggtgcccgccgagggggagag	CRISPR spacer
ctggtcgcctacgtggtggcccccgacgccacacc	Protospacer
****************** ** **** *  . .

118. spacer 10.7|3971695|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.714

ctggtcgcctacgtggtgcccgccgagggggagag	CRISPR spacer
ctggtcgcctacgtggtggcccccgacgccacacc	Protospacer
****************** ** **** *  . .

119. spacer 10.14|3972208|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.706

accagctcctcggcgccggggatgtccgctggga	CRISPR spacer
cgcagcacctcgtcgccggggatgtcgggcagat	Protospacer
  **** ***** ************* * ..*.

120. spacer 10.16|3972353|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007214 (Burkholderia plantarii strain ATCC 43733 plasmid bpln_1p, complete sequence) position: , mismatch: 10, identity: 0.706

ccgatctgctggtcgacatcgcccccgaggggga	CRISPR spacer
aggacatgctgctcgacatcgccaccgaggaact	Protospacer
  **. ***** *********** ******..

121. spacer 10.16|3972353|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049906 (Diaphorobacter sp. HDW4B plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ccgatctgctggtcgacat-----cgcccccgaggggga	CRISPR spacer
tcgatctgctggtcgtcatcgacccgttcccaag-----	Protospacer
.************** ***     **..***.**

122. spacer 10.20|3972644|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.706

tactccggcaccgagaccgccgcgaacatcacag	CRISPR spacer
tcctccggcagcgacaccgccgcgaaggaggtcg	Protospacer
* ******** *** *********** .  .. *

123. spacer 10.20|3972644|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.706

tactccggcaccgagaccgccgcgaacatcacag	CRISPR spacer
tcctccggcagcgacaccgccgcgaaggaggtcg	Protospacer
* ******** *** *********** .  .. *

124. spacer 11.2|4015583|33|NC_007777|CRISPRCasFinder matches to NC_022599 (Micrococcus sp. V7 plasmid pLMV7, complete sequence) position: , mismatch: 10, identity: 0.697

tactccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
gtctccggcaccgtgaccgccgcggacccggag	Protospacer
  *********** **********.** . . .

125. spacer 11.2|4015583|33|NC_007777|CRISPRCasFinder matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.697

tactccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
tcctccggcagcgacaccgccgcgaaggaggtc	Protospacer
* ******** *** *********** .  ..

126. spacer 11.2|4015583|33|NC_007777|CRISPRCasFinder matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.697

tactccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
tcctccggcagcgacaccgccgcgaaggaggtc	Protospacer
* ******** *** *********** .  ..

127. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.688

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
cctccggcagcgacaccgccgcgaaggaggtc	Protospacer
 ******** *** *********** .  ..

128. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.688

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
cctccggcagcgacaccgccgcgaaggaggtc	Protospacer
 ******** *** *********** .  ..

129. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

actccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
cgggcgccagcgagaccgccgcgaacatgctc	Protospacer
    ** ** ******************  .

130. spacer 11.4|4015603|32|NC_007777|PILER-CR matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 10, identity: 0.688

actccggcaccgagaccgccgcgaacatcaca-	CRISPR spacer
cctcccgcaccgagaccgccg-agatgccccgt	Protospacer
 **** *************** ..*...* *.

131. spacer 1.23|33529|33|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 11, identity: 0.667

gcctggcccggcccggccgcggggtcgggatga	CRISPR spacer
cggcggcccggcccgcccgcgggggcggtcgtt	Protospacer
   .*********** ******** ***

132. spacer 9.7|3905248|34|NC_007777|CRISPRCasFinder,CRT,PILER-CR matches to MF975638 (Streptomyces phage Abt2graduatex2, complete genome) position: , mismatch: 11, identity: 0.676

gatggtgacgacctggtgctgatctgcaccaacg	CRISPR spacer
cttggtgacgacctggtggtgacctgatggcgca	Protospacer
  **************** ***.***     .*.

133. spacer 10.6|3971623|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039909 (Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence) position: , mismatch: 11, identity: 0.686

gccctggaagtcgacgagatcgacgctgccgcggc	CRISPR spacer
gtgtatctgttcgacgagatcgacgctctcgcggc	Protospacer
*. .    . ***************** .******

134. spacer 10.7|3971695|35|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 11, identity: 0.686

ctggtcgcctacgtggtgcccgccgagggggagag	CRISPR spacer
ctcgtcgcctacgtcgtgcccgccgtccccggcct	Protospacer
** *********** **********     *.

135. spacer 10.16|3972353|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 11, identity: 0.676

ccgatctgctggtcgacatcgcccccgaggggga	CRISPR spacer
agcacttgctggacgacatcgccgccgaggatct	Protospacer
   *..****** ********** ******.

136. spacer 10.20|3972644|34|NC_007777|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

tactccggcaccgagaccgccgcgaacatcacag	CRISPR spacer
acgggcgccagcgagaccgccgcgaacatgctcg	Protospacer
     ** ** ******************  . *

137. spacer 11.2|4015583|33|NC_007777|CRISPRCasFinder matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.667

tactccggcaccgagaccgccgcgaacatcaca	CRISPR spacer
acgggcgccagcgagaccgccgcgaacatgctc	Protospacer
     ** ** ******************  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

123142 : 179987

Mycobacterium_virus(33.33%)

transposase,integrase

attL 140139:140192|attR 159255:159308

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011434576.1\|123142_124507_-\|transposase	transposase	NA	NA	NA	NA
WP_011434577.1\|124772_125201_+	hypothetical protein	NA	NA	NA	NA
WP_011434578.1\|125241_125610_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_023840621.1\|125719_126277_-	hypothetical protein	NA	NA	NA	NA
WP_011434582.1\|128267_129806_-	hypothetical protein	NA	NA	NA	NA
WP_011434583.1\|130056_131040_-	intradiol ring-cleavage dioxygenase	NA	NA	NA	NA
WP_023840626.1\|131257_131458_-	hypothetical protein	NA	NA	NA	NA
WP_011434584.1\|131791_132205_-	hypothetical protein	NA	NA	NA	NA
WP_011434585.1\|132381_134361_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_157858535.1\|134395_134830_-\|transposase	transposase	Q19ZT4	Mycobacterium_virus	4.3e-14	45.9
WP_011434587.1\|135221_139001_-	methionine synthase	A0A140XBC7	Dickeya_phage	3.4e-14	61.3
WP_083282414.1\|139210_139558_-	hypothetical protein	NA	NA	NA	NA
140139:140192	attL	NA	NA	NA	NA
WP_083503369.1\|140304_141645_-\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	2.0e-30	26.9
WP_082456667.1\|142954_143365_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_035958968.1\|143541_144150_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_049761030.1\|144128_144617_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011434594.1\|144897_148125_+	NACHT domain-containing protein	NA	NA	NA	NA
WP_011434595.1\|148288_149023_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_011434596.1\|149098_150523_+\|transposase	transposase	NA	NA	NA	NA
WP_011434597.1\|151405_152596_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011434598.1\|153064_154531_-	SAVED domain-containing protein	NA	NA	NA	NA
WP_011434599.1\|154537_155449_-	AAA family ATPase	NA	NA	NA	NA
WP_011434600.1\|155445_155955_-	hypothetical protein	NA	NA	NA	NA
WP_011434601.1\|155957_156923_-	nucleotidyltransferase	NA	NA	NA	NA
WP_011434602.1\|157062_157398_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011434603.1\|157381_157909_+	ImmA/IrrE family metallo-endopeptidase	Q854W5	Mycobacterium_virus	2.5e-08	39.4
WP_011434604.1\|158018_158840_-	hypothetical protein	NA	NA	NA	NA
WP_011434605.1\|160041_161406_-\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	4.4e-41	31.5
159255:159308	attR	NA	NA	NA	NA
WP_011434606.1\|161701_162172_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_131728957.1\|162175_162826_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_023842162.1\|163069_163372_+	hypothetical protein	NA	NA	NA	NA
WP_049761031.1\|163403_163628_+	hypothetical protein	NA	NA	NA	NA
WP_139168599.1\|164303_164501_+	hypothetical protein	NA	NA	NA	NA
WP_023842166.1\|165030_165240_+	hypothetical protein	NA	NA	NA	NA
WP_131728958.1\|165333_165717_+	hypothetical protein	NA	NA	NA	NA
WP_011434612.1\|165716_165908_+	hypothetical protein	NA	NA	NA	NA
WP_157858587.1\|166634_167696_+	hypothetical protein	NA	NA	NA	NA
WP_023842169.1\|168190_168370_+	hypothetical protein	NA	NA	NA	NA
WP_023842171.1\|168613_169264_-	hypothetical protein	NA	NA	NA	NA
WP_011434616.1\|169564_170038_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_011434617.1\|170021_170291_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_011434618.1\|170919_171693_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_011434619.1\|171893_173606_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_157858537.1\|174167_174713_+	hypothetical protein	NA	NA	NA	NA
WP_011434621.1\|174884_175619_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_011434622.1\|175761_176376_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_011434623.1\|176372_176858_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_157858538.1\|177102_177582_+	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	3.6e-06	28.0
WP_011434625.1\|177774_179004_+	3-carboxy-cis,cis-muconate cycloisomerase	NA	NA	NA	NA
WP_011434626.1\|179234_179987_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1131989 : 1213914

Bacillus_phage(33.33%)

transposase,integrase

attL 1127271:1127288|attR 1217036:1217053

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1127271:1127288	attL	NA	NA	NA	NA
WP_011435410.1\|1131989_1132445_-\|transposase	transposase	NA	NA	NA	NA
WP_011435411.1\|1132522_1133056_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_011435413.1\|1133944_1134694_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_011435414.1\|1134956_1137977_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_108913785.1\|1137991_1138591_-	hypothetical protein	NA	NA	NA	NA
WP_023841309.1\|1140685_1140862_+	hypothetical protein	NA	NA	NA	NA
WP_023841308.1\|1141126_1142944_+	glycosyltransferase	NA	NA	NA	NA
WP_011435418.1\|1142940_1144623_+	4-amino-4-deoxy-L-arabinose transferase	NA	NA	NA	NA
WP_041257794.1\|1144854_1145085_+	hypothetical protein	NA	NA	NA	NA
WP_011435420.1\|1145166_1147803_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	3.8e-41	33.6
WP_011435421.1\|1147974_1148547_+	hypothetical protein	NA	NA	NA	NA
WP_011435422.1\|1148569_1149052_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA
WP_011435423.1\|1149112_1149664_+	FHA domain-containing protein	NA	NA	NA	NA
WP_011435424.1\|1149716_1150100_-	hypothetical protein	NA	NA	NA	NA
WP_011435425.1\|1150113_1150914_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011435426.1\|1151738_1152257_-	hypothetical protein	NA	NA	NA	NA
WP_011435427.1\|1152440_1153943_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_011435428.1\|1154593_1155637_-	SDR family NAD(P)-dependent oxidoreductase	A0A2H4UUK0	Bodo_saltans_virus	2.0e-25	28.5
WP_011435429.1\|1155742_1156882_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	7.7e-15	23.6
WP_148214905.1\|1156946_1157750_-	response regulator	W8CYM9	Bacillus_phage	3.0e-37	36.2
WP_011435431.1\|1157938_1158619_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_011435432.1\|1158630_1159353_+	DUF2064 domain-containing protein	NA	NA	NA	NA
WP_085949886.1\|1159430_1160072_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_011435434.1\|1160004_1160514_-	hypothetical protein	NA	NA	NA	NA
WP_173645825.1\|1160486_1161854_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_011435436.1\|1161852_1163328_+	DUF2029 domain-containing protein	NA	NA	NA	NA
WP_076806614.1\|1163650_1164466_-	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_063613394.1\|1165298_1165610_-	hypothetical protein	NA	NA	NA	NA
WP_131728922.1\|1165644_1166892_+	hypothetical protein	NA	NA	NA	NA
WP_011435438.1\|1167234_1167672_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_035730973.1\|1173721_1174708_-	beta-ketoacyl-ACP synthase 3	NA	NA	NA	NA
WP_011435442.1\|1174729_1177960_-	type I polyketide synthase	NA	NA	NA	NA
WP_131728921.1\|1178210_1180649_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_023841295.1\|1181215_1183123_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_011435445.1\|1183119_1184094_+	hypothetical protein	NA	NA	NA	NA
WP_011435446.1\|1184252_1185611_+	cation:proton antiporter	NA	NA	NA	NA
WP_023841293.1\|1186906_1187647_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_023841292.1\|1187789_1188311_-	lipocalin-like domain-containing protein	NA	NA	NA	NA
WP_011435450.1\|1188602_1189940_-	crotonyl-CoA carboxylase/reductase	NA	NA	NA	NA
WP_011435451.1\|1189980_1191759_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_011435453.1\|1193909_1194464_-	hypothetical protein	NA	NA	NA	NA
WP_035730986.1\|1194964_1195783_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011435455.1\|1195982_1198160_+	EAL domain-containing protein	G3MA91	Bacillus_virus	6.4e-18	31.6
WP_157493315.1\|1198532_1198685_+	hypothetical protein	NA	NA	NA	NA
WP_011435456.1\|1198730_1199582_+	GvpL/GvpF family gas vesicle protein	NA	NA	NA	NA
WP_011435457.1\|1199757_1200189_+	gas vesicle structural protein GvpA	NA	NA	NA	NA
WP_011435458.1\|1200194_1201013_+	GvpL/GvpF family gas vesicle protein	NA	NA	NA	NA
WP_011435459.1\|1201115_1201661_+	hypothetical protein	NA	NA	NA	NA
WP_082456736.1\|1201615_1202344_-	arsenate reductase ArsC	NA	NA	NA	NA
WP_023841286.1\|1202781_1203990_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_011435462.1\|1204483_1205935_+	alkaline phosphatase D family protein	NA	NA	NA	NA
WP_049760843.1\|1206167_1207571_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_011435464.1\|1207573_1207846_+	hypothetical protein	NA	NA	NA	NA
WP_011435465.1\|1207869_1209063_+	hypothetical protein	NA	NA	NA	NA
WP_082456848.1\|1210479_1210941_+\|integrase	tyrosine-type recombinase/integrase	S5MNZ2	Brevibacillus_phage	5.9e-06	42.4
WP_011435467.1\|1210972_1212196_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_108913766.1\|1212861_1213914_-\|transposase	IS630 family transposase	NA	NA	NA	NA
1217036:1217053	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1266361 : 1359078

Streptomyces_phage(28.57%)

integrase,transposase,bacteriocin,holin,protease

attL 1278634:1278650|attR 1372078:1372093

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011435513.1\|1266361_1268236_-\|holin	choline/carnitine O-acyltransferase	NA	NA	NA	NA
WP_108913794.1\|1268447_1269305_-	methyltransferase type 12	NA	NA	NA	NA
WP_011435515.1\|1269499_1270369_-	hypothetical protein	NA	NA	NA	NA
WP_011435516.1\|1270988_1271453_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_011435517.1\|1271802_1272426_-	hypothetical protein	NA	NA	NA	NA
WP_011435518.1\|1272428_1273040_-	hypothetical protein	NA	NA	NA	NA
WP_011435519.1\|1273234_1274296_-	hydrogenase expression/formation protein HypE	NA	NA	NA	NA
WP_011435520.1\|1274288_1275395_-	hydrogenase formation protein HypD	NA	NA	NA	NA
WP_011435521.1\|1275391_1275673_-	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA
WP_011435522.1\|1275676_1278223_-	carbamoyltransferase HypF	NA	NA	NA	NA
WP_011435523.1\|1278219_1279308_-	NHL repeat-containing protein	NA	NA	NA	NA
1278634:1278650	attL	NA	NA	NA	NA
WP_011435524.1\|1279454_1280705_-	hypothetical protein	NA	NA	NA	NA
1278634:1278650	attL	NA	NA	NA	NA
WP_011435525.1\|1280767_1281334_-\|protease	hydrogenase maturation protease	NA	NA	NA	NA
WP_011435526.1\|1281347_1282955_-	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA
WP_011435527.1\|1283030_1284002_-	hydrogenase	NA	NA	NA	NA
WP_023841586.1\|1284429_1284924_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_011435529.1\|1284930_1285824_+	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA
WP_035733742.1\|1286101_1286323_-	hypothetical protein	NA	NA	NA	NA
WP_011435531.1\|1286516_1287821_-	TIGR02679 family protein	NA	NA	NA	NA
WP_108913591.1\|1287817_1292131_-	TIGR02680 family protein	NA	NA	NA	NA
WP_011435533.1\|1292145_1293414_-	TIGR02678 family protein	NA	NA	NA	NA
WP_085949863.1\|1293410_1295288_-	TIGR02677 family protein	NA	NA	NA	NA
WP_011435535.1\|1296261_1297698_-	FAD-binding oxidoreductase	S4VXI2	Pandoravirus	7.7e-36	29.5
WP_011435537.1\|1300560_1301055_+	hypothetical protein	NA	NA	NA	NA
WP_193359378.1\|1301086_1301407_-	hypothetical protein	NA	NA	NA	NA
WP_011435539.1\|1303461_1303659_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_011435540.1\|1303655_1304036_+	type II toxin-antitoxin system death-on-curing family toxin	A0A1B3AYM0	Gordonia_phage	5.5e-18	46.7
WP_082456783.1\|1304712_1305375_+	DUF433 domain-containing protein	NA	NA	NA	NA
WP_011435543.1\|1305377_1305821_+	hypothetical protein	NA	NA	NA	NA
WP_011435544.1\|1305923_1306652_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_011435546.1\|1307961_1309959_-	hypothetical protein	NA	NA	NA	NA
WP_011435547.1\|1309955_1311128_-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_011435548.1\|1311130_1311880_-	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	1.3e-13	44.4
WP_011435549.1\|1312683_1313082_+	hypothetical protein	NA	NA	NA	NA
WP_011435550.1\|1313123_1316426_-	N-6 DNA methylase	NA	NA	NA	NA
WP_134351940.1\|1317511_1318846_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_011435553.1\|1318990_1320430_-\|transposase	transposase	NA	NA	NA	NA
WP_157858594.1\|1320594_1320828_-\|transposase	transposase	NA	NA	NA	NA
WP_011435555.1\|1321239_1322889_+\|transposase	ISAzo13-like element ISFsp13 family transposase	NA	NA	NA	NA
1322666:1322682	attR	NA	NA	NA	NA
WP_011435556.1\|1322973_1324188_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
1322666:1322682	attR	NA	NA	NA	NA
WP_011435557.1\|1324318_1325155_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011435558.1\|1325173_1325617_+	hypothetical protein	NA	NA	NA	NA
WP_082456844.1\|1325658_1326669_+	cytochrome P450	NA	NA	NA	NA
WP_011435560.1\|1326674_1327139_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_173645828.1\|1327153_1328095_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_035734604.1\|1329547_1330192_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011435565.1\|1330191_1330536_+	hypothetical protein	NA	NA	NA	NA
WP_011435566.1\|1330563_1331979_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	3.9e-40	33.0
WP_052154563.1\|1332154_1333237_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011435567.1\|1333246_1333606_+	hypothetical protein	NA	NA	NA	NA
WP_011435568.1\|1333772_1334150_-	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_011435569.1\|1334277_1335111_+\|transposase	IS5-like element ISFsp7 family transposase	NA	NA	NA	NA
WP_011435570.1\|1335453_1336731_-	hypothetical protein	NA	NA	NA	NA
WP_011435571.1\|1337563_1338466_-	hypothetical protein	NA	NA	NA	NA
WP_011435572.1\|1338465_1339506_-\|bacteriocin	thiopeptide-type bacteriocin biosynthesis protein	NA	NA	NA	NA
WP_011435573.1\|1339487_1340705_-	lanthionine synthetase C family protein	NA	NA	NA	NA
WP_011435574.1\|1340701_1343791_-	lantibiotic dehydratase	NA	NA	NA	NA
WP_023840439.1\|1343815_1343986_-	FxLD family lanthipeptide	NA	NA	NA	NA
WP_085949864.1\|1344034_1345216_-	methyltransferase, FxLD system	NA	NA	NA	NA
WP_035730121.1\|1346187_1346397_-	DUF397 domain-containing protein	NA	NA	NA	NA
WP_108913238.1\|1346701_1347994_+	hypothetical protein	NA	NA	NA	NA
WP_011435577.1\|1347996_1348569_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_023840445.1\|1349472_1350369_+	restriction endonuclease	NA	NA	NA	NA
WP_035730000.1\|1350706_1351036_-	hypothetical protein	NA	NA	NA	NA
WP_011435580.1\|1351543_1352092_+	HD domain-containing protein	NA	NA	NA	NA
WP_011435581.1\|1352079_1352550_-	NUDIX domain-containing protein	A0A1L6UW58	Biomphalaria_virus	1.3e-05	43.1
WP_011435582.1\|1352555_1353404_-	helix-turn-helix domain-containing protein	Q1WDJ8	Streptomyces_phage	6.4e-22	30.4
WP_011435583.1\|1353635_1353911_+	hypothetical protein	NA	NA	NA	NA
WP_035910131.1\|1353907_1354399_+	hypothetical protein	NA	NA	NA	NA
WP_011435585.1\|1354446_1354935_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011435586.1\|1355119_1355524_+	hypothetical protein	NA	NA	NA	NA
WP_011435587.1\|1355520_1355847_+	hypothetical protein	NA	NA	NA	NA
WP_011435589.1\|1357261_1357561_+	hypothetical protein	NA	NA	NA	NA
WP_011435590.1\|1357809_1359078_+\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	1.8e-33	27.7
1372078:1372093	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1997494 : 2006501

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023841555.1\|1997494_1998301_+	Fe-S cluster assembly ATPase SufC	W8CYL7	Bacillus_phage	1.4e-05	24.8
WP_011436103.1\|1998297_1999626_+	cysteine desulfurase	Q2XUY6	environmental_halophage	2.8e-109	47.1
WP_011436104.1\|1999622_2000141_+	SUF system NifU family Fe-S cluster assembly protein	A0A0K1LS29	Mycobacterium_phage	1.5e-21	45.2
WP_011436105.1\|2000137_2000587_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_011436106.1\|2000814_2002053_+	glucose-1-phosphate adenylyltransferase	A0A291LA53	Escherichia_phage	7.1e-06	23.8
WP_011436107.1\|2002165_2003401_+	glycogen synthase	NA	NA	NA	NA
WP_023841554.1\|2003423_2004428_-	dTDP-glucose 4,6-dehydratase	A0A140G5S6	Enterobacteria_phage	4.4e-62	40.3
WP_023841553.1\|2004431_2004680_+	hypothetical protein	NA	NA	NA	NA
WP_011436109.1\|2004887_2006501_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	3.6e-42	24.4

DBSCAN-SWA_5

2059526 : 2113885

Shigella_phage(12.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011436164.1\|2059526_2059817_+\|transposase	transposase	NA	NA	NA	NA
WP_083503472.1\|2059813_2060707_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.1e-48	39.8
WP_083282554.1\|2060970_2061150_-	hypothetical protein	NA	NA	NA	NA
WP_049761065.1\|2061086_2062328_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_011436167.1\|2063499_2063949_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011436168.1\|2063940_2066907_-	LysM peptidoglycan-binding domain-containing protein	A0A0U4B6X0	Arthrobacter_phage	2.9e-05	54.0
WP_131728943.1\|2066903_2067449_-	hypothetical protein	NA	NA	NA	NA
WP_011436170.1\|2067331_2067778_-	pilus assembly protein	NA	NA	NA	NA
WP_083503446.1\|2067774_2068236_-	pilus assembly protein	NA	NA	NA	NA
WP_035958833.1\|2068718_2068913_-	hypothetical protein	NA	NA	NA	NA
WP_011436172.1\|2068936_2069842_-	type II secretion system F family protein	NA	NA	NA	NA
WP_011436173.1\|2069838_2070747_-	pilus assembly protein TadB	NA	NA	NA	NA
WP_011436174.1\|2070743_2072189_-	CpaF family protein	NA	NA	NA	NA
WP_011436175.1\|2072185_2073007_-	hypothetical protein	NA	NA	NA	NA
WP_108913817.1\|2073011_2073701_-	flagellar biosynthesis protein FlgA	NA	NA	NA	NA
WP_108913818.1\|2073780_2074353_-	hypothetical protein	NA	NA	NA	NA
WP_167534327.1\|2074799_2075417_-	hypothetical protein	NA	NA	NA	NA
WP_035958835.1\|2075863_2076088_+	hypothetical protein	NA	NA	NA	NA
WP_011436180.1\|2076084_2076735_+	2'-5' RNA ligase family protein	NA	NA	NA	NA
WP_051569483.1\|2076807_2077500_-	hypothetical protein	NA	NA	NA	NA
WP_011436182.1\|2077502_2078234_-	hypothetical protein	NA	NA	NA	NA
WP_011436183.1\|2078347_2079004_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011436185.1\|2079852_2080584_-	HAD family hydrolase	NA	NA	NA	NA
WP_011436186.1\|2080580_2081159_-	GTP cyclohydrolase I	E7DN69	Pneumococcus_phage	1.9e-30	45.5
WP_131728945.1\|2081149_2081734_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_108913822.1\|2081733_2082912_-	UbiD family decarboxylase	NA	NA	NA	NA
WP_011436189.1\|2082992_2083529_-	phosphoribosyltransferase	NA	NA	NA	NA
WP_011436190.1\|2083525_2084683_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.4e-51	31.1
WP_011436191.1\|2084719_2085475_-	7-carboxy-7-deazaguanine synthase QueE	A0A2P1JXY9	Rhodococcus_phage	4.2e-33	38.2
WP_011436192.1\|2085471_2086419_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_035958845.1\|2086420_2086792_-	6-carboxytetrahydropterin synthase	S4U060	uncultured_phage	3.4e-12	40.2
WP_011436194.1\|2087129_2088554_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_011436196.1\|2089421_2089754_-	hypothetical protein	NA	NA	NA	NA
WP_011436197.1\|2089952_2090915_-	amidinotransferase	NA	NA	NA	NA
WP_011436198.1\|2090889_2092215_-	sulfotransferase	NA	NA	NA	NA
WP_011436199.1\|2092226_2094203_-	methyltransferase domain-containing protein	G3M9Z3	Bacillus_virus	1.4e-48	32.7
WP_011436200.1\|2094243_2094717_-	rubrerythrin	NA	NA	NA	NA
WP_049761068.1\|2096041_2097292_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_083282554.1\|2097228_2097408_+	hypothetical protein	NA	NA	NA	NA
WP_011436202.1\|2097792_2099217_-\|transposase	transposase	NA	NA	NA	NA
WP_011436203.1\|2099587_2100775_+	sulfatase	NA	NA	NA	NA
WP_011436204.1\|2100764_2101178_+	hypothetical protein	NA	NA	NA	NA
WP_011436205.1\|2101639_2102752_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_011436206.1\|2102800_2104114_+	MFS transporter	NA	NA	NA	NA
WP_011436207.1\|2104159_2105347_+	cytochrome P450	NA	NA	NA	NA
WP_035941816.1\|2105745_2106699_+	adenosine deaminase	NA	NA	NA	NA
WP_049760884.1\|2106923_2107880_-	phosphotransferase	NA	NA	NA	NA
WP_049760885.1\|2107933_2109283_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	9.4e-36	36.0
WP_023841610.1\|2109522_2110335_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011436212.1\|2110334_2111411_-	sulfotransferase	NA	NA	NA	NA
WP_011436213.1\|2111426_2112605_-	radical SAM protein	NA	NA	NA	NA
WP_049760812.1\|2112601_2113885_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2160883 : 2208209

Acidithiobacillus_phage(66.67%)

bacteriocin,transposase,integrase,tRNA

attL 2167059:2167075|attR 2208600:2208616

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011436259.1\|2160883_2161735_+\|bacteriocin	thiopeptide-type bacteriocin biosynthesis protein	NA	NA	NA	NA
WP_023842038.1\|2161731_2162907_+	hypothetical protein	NA	NA	NA	NA
WP_011436261.1\|2162860_2163715_-	DUF1932 domain-containing protein	NA	NA	NA	NA
WP_023842037.1\|2163730_2163928_-	hypothetical protein	NA	NA	NA	NA
WP_011436262.1\|2163951_2164266_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_011436263.1\|2164267_2165722_-	hypothetical protein	NA	NA	NA	NA
WP_011436264.1\|2165855_2166155_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_011436265.1\|2166147_2167707_-	hypothetical protein	NA	NA	NA	NA
2167059:2167075	attL	NA	NA	NA	NA
WP_023842254.1\|2168108_2168360_-	hypothetical protein	NA	NA	NA	NA
WP_011436267.1\|2168465_2168753_-	hypothetical protein	NA	NA	NA	NA
WP_011436268.1\|2168749_2169130_-	hypothetical protein	NA	NA	NA	NA
WP_011436269.1\|2169126_2169831_-	ATP-binding protein	NA	NA	NA	NA
WP_011436270.1\|2169950_2170199_+	hypothetical protein	NA	NA	NA	NA
WP_011436271.1\|2170275_2171514_-	hypothetical protein	NA	NA	NA	NA
WP_011436272.1\|2171510_2172314_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011436273.1\|2172930_2174460_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_011436274.1\|2174456_2175245_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_162865199.1\|2175845_2176007_+	hypothetical protein	NA	NA	NA	NA
WP_108913628.1\|2176269_2177028_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011436277.1\|2177076_2178006_+\|bacteriocin	thiopeptide-type bacteriocin biosynthesis protein	NA	NA	NA	NA
WP_023841963.1\|2178296_2178911_-	hypothetical protein	NA	NA	NA	NA
WP_011436281.1\|2179810_2180740_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_023841964.1\|2181001_2181373_-	hypothetical protein	NA	NA	NA	NA
WP_023841965.1\|2181451_2182120_-	hypothetical protein	NA	NA	NA	NA
WP_011436284.1\|2182246_2183383_-	hypothetical protein	NA	NA	NA	NA
WP_023841966.1\|2183561_2184002_+	hypothetical protein	NA	NA	NA	NA
WP_011436287.1\|2184557_2185370_-	hypothetical protein	NA	NA	NA	NA
WP_011436289.1\|2186393_2187029_+	ATP-binding protein	NA	NA	NA	NA
WP_011436290.1\|2187140_2188004_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011436291.1\|2188173_2189244_+	DUF4037 domain-containing protein	NA	NA	NA	NA
WP_085949889.1\|2189588_2189939_+	helix-turn-helix domain-containing protein	K4ICM4	Acidithiobacillus_phage	2.7e-11	44.6
WP_023841970.1\|2189944_2190544_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-25	44.1
WP_167534305.1\|2191113_2191254_+	hypothetical protein	NA	NA	NA	NA
WP_011436295.1\|2192616_2193231_+	hypothetical protein	NA	NA	NA	NA
WP_166793634.1\|2193274_2194867_+	cytochrome P450	NA	NA	NA	NA
WP_011436297.1\|2194928_2195882_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_011436298.1\|2196011_2197109_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	1.5e-15	26.6
WP_011436299.1\|2197227_2198688_+	RiPP maturation radical SAM C-methyltransferase	NA	NA	NA	NA
WP_011436300.1\|2198758_2200399_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_167534311.1\|2200367_2201003_+	hypothetical protein	NA	NA	NA	NA
WP_011436302.1\|2200999_2201743_+	hypothetical protein	NA	NA	NA	NA
WP_011436303.1\|2201880_2202993_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_011436304.1\|2203187_2203727_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_035959251.1\|2203651_2204269_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_023842211.1\|2204949_2206416_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_011436307.1\|2206546_2206990_-	hypothetical protein	NA	NA	NA	NA
WP_011436308.1\|2207078_2208209_+\|transposase	IS630 family transposase	NA	NA	NA	NA
2208600:2208616	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2258114 : 2309891

Orpheovirus(33.33%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011434743.1\|2258114_2259755_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_167534329.1\|2259920_2260412_+	sulfotransferase family protein	NA	NA	NA	NA
WP_035734094.1\|2260513_2262004_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_011436358.1\|2262411_2263227_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_011436359.1\|2263507_2264434_-	acyl-ACP desaturase	NA	NA	NA	NA
WP_011436360.1\|2264465_2265386_-	class I SAM-dependent methyltransferase	A0A2I2L5L3	Orpheovirus	1.6e-10	23.0
WP_011436361.1\|2265382_2265643_-	acyl carrier protein	NA	NA	NA	NA
WP_108913832.1\|2265643_2266309_-	PaaI family thioesterase	NA	NA	NA	NA
WP_108913607.1\|2266389_2268285_-	AMP-binding protein	NA	NA	NA	NA
WP_011436364.1\|2269042_2270332_+	cytochrome P450	NA	NA	NA	NA
WP_082456797.1\|2270517_2271531_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_108913608.1\|2271901_2273593_+	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	8.5e-42	23.1
WP_011436367.1\|2273685_2273922_+	hypothetical protein	NA	NA	NA	NA
WP_035734092.1\|2273975_2275211_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_023841713.1\|2275355_2275589_+	hypothetical protein	NA	NA	NA	NA
WP_011436370.1\|2275681_2276320_-	DUF4389 domain-containing protein	NA	NA	NA	NA
WP_011436371.1\|2276720_2277131_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_011436372.1\|2277082_2277934_+	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA
WP_035941907.1\|2278161_2279742_+	hypothetical protein	NA	NA	NA	NA
WP_011436374.1\|2279738_2280344_+\|protease	hydrogenase maturation protease	NA	NA	NA	NA
WP_011436375.1\|2280340_2281405_+	hydrogenase expression protein HypE	NA	NA	NA	NA
WP_011436376.1\|2281498_2283292_+	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA
WP_011436377.1\|2283284_2283860_+	NifU family protein	NA	NA	NA	NA
WP_023841716.1\|2284567_2284780_+	hypothetical protein	NA	NA	NA	NA
WP_082456798.1\|2284983_2287407_+	carbamoyltransferase HypF	NA	NA	NA	NA
WP_011436380.1\|2287414_2287717_+	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA
WP_011436381.1\|2287713_2288922_+	hydrogenase formation protein HypD	NA	NA	NA	NA
WP_011436382.1\|2288911_2289991_+	hydrogenase expression/formation protein HypE	NA	NA	NA	NA
WP_011436383.1\|2290593_2291019_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_148214935.1\|2291271_2292396_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011436385.1\|2292693_2293770_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_023840405.1\|2294295_2294601_+	hypothetical protein	NA	NA	NA	NA
WP_011436388.1\|2295482_2296895_-	hypothetical protein	NA	NA	NA	NA
WP_023840402.1\|2297226_2297568_+	DUF397 domain-containing protein	NA	NA	NA	NA
WP_070130442.1\|2297560_2297863_+	hypothetical protein	NA	NA	NA	NA
WP_083771071.1\|2297945_2298611_+	hypothetical protein	NA	NA	NA	NA
WP_011436391.1\|2298607_2299135_+	hypothetical protein	NA	NA	NA	NA
WP_157858598.1\|2300514_2300664_-	hypothetical protein	NA	NA	NA	NA
WP_011436393.1\|2300822_2302085_-\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	1.8e-36	28.8
WP_011436395.1\|2302995_2303139_-	hypothetical protein	NA	NA	NA	NA
WP_049760812.1\|2303458_2304742_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011436396.1\|2304751_2305471_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_011436397.1\|2305620_2306157_+	DUF1003 domain-containing protein	NA	NA	NA	NA
WP_011436398.1\|2306247_2307450_-	cytochrome P450	NA	NA	NA	NA
WP_108913766.1\|2308838_2309891_-\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

2379767 : 2451718

Ochrobactrum_phage(25.0%)

transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085949890.1\|2379767_2379944_-\|transposase	transposase	NA	NA	NA	NA
WP_085949870.1\|2380168_2380991_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_082456818.1\|2381013_2381676_-	FABP family protein	NA	NA	NA	NA
WP_035959116.1\|2381843_2385359_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_011436459.1\|2385577_2386546_+	ParA family protein	A0A240F4U1	Ochrobactrum_phage	8.9e-12	28.3
WP_011436461.1\|2387388_2388540_-	hypothetical protein	NA	NA	NA	NA
WP_011436462.1\|2388536_2389382_-\|bacteriocin	thiopeptide-type bacteriocin biosynthesis protein	NA	NA	NA	NA
WP_011436463.1\|2389394_2390633_-	lanthionine synthetase C family protein	NA	NA	NA	NA
WP_011436464.1\|2390629_2393725_-	lantibiotic dehydratase	NA	NA	NA	NA
WP_023841893.1\|2393810_2394005_-	FxLD family lanthipeptide	NA	NA	NA	NA
WP_011436465.1\|2394075_2395302_-	methyltransferase, FxLD system	NA	NA	NA	NA
WP_011436466.1\|2396438_2397497_+	NAD-dependent epimerase	NA	NA	NA	NA
WP_011436467.1\|2397526_2397970_-	hypothetical protein	NA	NA	NA	NA
WP_011435557.1\|2397988_2398825_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011436468.1\|2399580_2400405_-	DUF3050 domain-containing protein	A0A1L7N1A4	Ralstonia_phage	7.0e-34	37.2
WP_011436469.1\|2400556_2400871_+	hypothetical protein	NA	NA	NA	NA
WP_035959128.1\|2401613_2402066_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_011436471.1\|2402254_2402515_-	hypothetical protein	NA	NA	NA	NA
WP_011436472.1\|2402678_2403941_-	cytochrome P450	NA	NA	NA	NA
WP_011436473.1\|2403937_2405377_-	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase-like protein	NA	NA	NA	NA
WP_011436474.1\|2405392_2405806_-	PaaI family thioesterase	NA	NA	NA	NA
WP_035959124.1\|2405924_2407289_-	MFS transporter	NA	NA	NA	NA
WP_011436476.1\|2407410_2408898_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.9e-37	26.8
WP_131728960.1\|2408899_2409133_-	hypothetical protein	NA	NA	NA	NA
WP_011436477.1\|2409129_2410137_-	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_011436478.1\|2410133_2410421_-	acyl carrier protein	NA	NA	NA	NA
WP_157858590.1\|2410434_2412057_-	AMP-binding protein	Q75ZG1	Hepacivirus	1.1e-09	23.7
WP_167534312.1\|2412077_2413787_-	AMP-binding protein	NA	NA	NA	NA
WP_011434965.1\|2414274_2416008_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_049760812.1\|2416798_2418082_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_083494934.1\|2419164_2419896_+	HAD family hydrolase	NA	NA	NA	NA
WP_049760897.1\|2420136_2420733_-	response regulator transcription factor	NA	NA	NA	NA
WP_011436484.1\|2420933_2422574_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_011436485.1\|2422888_2423410_+\|transposase	transposase	NA	NA	NA	NA
WP_035734546.1\|2423539_2424106_+	hypothetical protein	NA	NA	NA	NA
WP_011436487.1\|2424174_2424618_-	hypothetical protein	NA	NA	NA	NA
WP_011436488.1\|2424706_2425804_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_011434618.1\|2425983_2426757_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_011436491.1\|2428606_2429926_-	tryptophan 7-halogenase	NA	NA	NA	NA
WP_011436492.1\|2429979_2431317_-	hypothetical protein	NA	NA	NA	NA
WP_011436493.1\|2431321_2432596_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_011436494.1\|2432595_2433753_-	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_011436495.1\|2433793_2434894_-	3-dehydroquinate synthase II family protein	NA	NA	NA	NA
WP_011436496.1\|2434927_2435746_-	2-amino-4,5-dihydroxy-6-one-heptanoic acid-7-phosphate synthase	NA	NA	NA	NA
WP_011436497.1\|2435761_2436988_-	aspartate kinase	NA	NA	NA	NA
WP_035959176.1\|2437070_2437892_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_011434965.1\|2437917_2439651_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_011436499.1\|2439715_2439955_-	hypothetical protein	NA	NA	NA	NA
WP_108913441.1\|2440106_2441372_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_011436501.1\|2441753_2442944_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_023841880.1\|2443118_2443502_-	hypothetical protein	NA	NA	NA	NA
WP_011434965.1\|2444290_2446024_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_011436503.1\|2447406_2448243_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011435558.1\|2448261_2448705_+	hypothetical protein	NA	NA	NA	NA
WP_023841846.1\|2449148_2450045_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011436505.1\|2450173_2450641_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_108913766.1\|2450665_2451718_-\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

2684908 : 2722411

Microcystis_virus(20.0%)

transposase,integrase

attL 2685031:2685047|attR 2728183:2728199

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_108913407.1\|2684908_2685958_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
2685031:2685047	attL	NA	NA	NA	NA
WP_011436719.1\|2686049_2686334_-	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA
WP_011436721.1\|2686687_2686966_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_011436722.1\|2687063_2687747_+	DUF2599 domain-containing protein	NA	NA	NA	NA
WP_011436723.1\|2687824_2688406_-	TIGR03086 family protein	NA	NA	NA	NA
WP_011436724.1\|2688412_2689009_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011436725.1\|2689118_2689793_+	formylglycine-generating enzyme family protein	A0A7F1	Microcystis_virus	1.9e-13	43.1
WP_011436726.1\|2689870_2691298_-	hypothetical protein	NA	NA	NA	NA
WP_035959139.1\|2691709_2692516_+	methylenetetrahydrofolate reductase	NA	NA	NA	NA
WP_023841897.1\|2693117_2694047_-	hypothetical protein	NA	NA	NA	NA
WP_011436729.1\|2694043_2694559_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_023841898.1\|2694971_2695460_+	DinB family protein	NA	NA	NA	NA
WP_167534314.1\|2695626_2696151_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011436734.1\|2699903_2700347_+	hypothetical protein	NA	NA	NA	NA
WP_011436735.1\|2700552_2701782_-	MFS transporter	NA	NA	NA	NA
WP_011436736.1\|2701778_2702168_-	CrcB family protein	NA	NA	NA	NA
WP_035733534.1\|2702164_2702512_-	DUF190 domain-containing protein	NA	NA	NA	NA
WP_011436738.1\|2702508_2703030_-	CrcB family protein	NA	NA	NA	NA
WP_035959142.1\|2703296_2703704_-	arsenate reductase ArsC	NA	NA	NA	NA
WP_049761082.1\|2703739_2704492_-	aquaporin	NA	NA	NA	NA
WP_011436741.1\|2704534_2705056_-	VOC family protein	NA	NA	NA	NA
WP_131728962.1\|2705414_2706041_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_049760812.1\|2706481_2707765_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011436744.1\|2707758_2708661_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_011436745.1\|2709150_2709531_-	hypothetical protein	NA	NA	NA	NA
WP_023840322.1\|2709527_2709785_-	hypothetical protein	NA	NA	NA	NA
WP_108913870.1\|2710039_2710249_+	hypothetical protein	NA	NA	NA	NA
WP_108913869.1\|2710321_2710669_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_035733467.1\|2710677_2710947_-	hypothetical protein	NA	NA	NA	NA
WP_011436750.1\|2711605_2712811_+	acyltransferase	A9YX16	Burkholderia_phage	8.5e-12	27.7
WP_082456631.1\|2712868_2713300_+	AMP-binding protein	NA	NA	NA	NA
WP_082456630.1\|2713324_2714224_+	tryptophan 7-halogenase	NA	NA	NA	NA
WP_049760907.1\|2714226_2714805_+	serine hydrolase family protein	NA	NA	NA	NA
WP_023840318.1\|2714892_2715057_+	hypothetical protein	NA	NA	NA	NA
WP_011436754.1\|2715938_2716403_+	NUDIX pyrophosphatase	NA	NA	NA	NA
WP_011436755.1\|2716387_2716999_-	hypothetical protein	NA	NA	NA	NA
WP_011436756.1\|2717073_2718042_-\|integrase	tyrosine-type recombinase/integrase	A0A1B1P7C7	Bacillus_phage	4.3e-22	30.4
WP_023840315.1\|2718071_2718365_-	hypothetical protein	NA	NA	NA	NA
WP_035941181.1\|2718363_2719314_+	site-specific DNA-methyltransferase	G1D1F5	Mycobacterium_virus	4.5e-85	52.6
WP_011436758.1\|2719346_2719664_-	hypothetical protein	NA	NA	NA	NA
WP_011436759.1\|2719660_2722411_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	2.3e-158	40.5
2728183:2728199	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2925823 : 2999480

Pandoravirus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049760812.1\|2925823_2927107_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_049760913.1\|2927327_2927762_-	hypothetical protein	NA	NA	NA	NA
WP_011436893.1\|2928136_2929261_+	CapA family protein	S4VS02	Pandoravirus	4.7e-105	53.1
WP_011436894.1\|2929338_2930742_-	DUF1298 domain-containing protein	NA	NA	NA	NA
WP_082456793.1\|2931020_2932106_-	prephenate dehydratase	NA	NA	NA	NA
WP_011436896.1\|2932142_2933435_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_011436897.1\|2933439_2934429_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_011436898.1\|2934425_2935592_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA
WP_011436899.1\|2936675_2938283_-	ubiquinol-cytochrome c reductase cytochrome b subunit	NA	NA	NA	NA
WP_023841669.1\|2938279_2939131_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_157493468.1\|2939223_2939400_-	hypothetical protein	NA	NA	NA	NA
WP_011436902.1\|2939489_2939933_-	cytochrome c oxidase subunit 4	NA	NA	NA	NA
WP_108913839.1\|2939929_2941696_-	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_011436904.1\|2941956_2943768_-	glycoside hydrolase family 15 protein	NA	NA	NA	NA
WP_011436905.1\|2944038_2945838_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA
WP_011436906.1\|2946252_2947761_+	hopanoid C-3 methylase HpnR	NA	NA	NA	NA
WP_011436907.1\|2947844_2949029_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_011436908.1\|2949055_2950384_-	Dyp-type peroxidase	NA	NA	NA	NA
WP_108913840.1\|2950380_2951112_-	SCO family protein	NA	NA	NA	NA
WP_011436910.1\|2951433_2951970_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_011436911.1\|2952050_2953931_+	chloride channel protein	NA	NA	NA	NA
WP_011436912.1\|2953900_2955085_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA
WP_011436913.1\|2955147_2955834_-	CoA transferase subunit B	NA	NA	NA	NA
WP_011436914.1\|2955835_2956627_-	CoA transferase subunit A	NA	NA	NA	NA
WP_011436915.1\|2956628_2957441_-	hypothetical protein	NA	NA	NA	NA
WP_011436916.1\|2957492_2959817_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
WP_011436917.1\|2959852_2961979_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
WP_023841948.1\|2962001_2962430_-	acetone carboxylase subunit gamma	NA	NA	NA	NA
WP_011436919.1\|2962482_2964396_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
WP_011436920.1\|2964578_2966426_+	GAF domain-containing protein	NA	NA	NA	NA
WP_011436921.1\|2966912_2967794_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_011436922.1\|2967790_2968999_+	metal cation transporter	NA	NA	NA	NA
WP_011436923.1\|2969277_2970927_-	chaperonin GroEL	A0A240F779	uncultured_virus	1.8e-134	49.2
WP_011436924.1\|2971116_2972142_-	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA
WP_011436925.1\|2972178_2972895_-	iron-sulfur cluster assembly protein	NA	NA	NA	NA
WP_011436926.1\|2972891_2973929_-	amidohydrolase	NA	NA	NA	NA
WP_049760914.1\|2974016_2974325_-	MmoB/DmpM family protein	NA	NA	NA	NA
WP_011436928.1\|2974378_2975482_-	aromatic/alkene monooxygenase hydroxylase subunit beta	NA	NA	NA	NA
WP_011436929.1\|2975538_2976591_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_011436930.1\|2976785_2978435_-	aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha	NA	NA	NA	NA
WP_049760915.1\|2978859_2979615_+	GAF domain-containing protein	NA	NA	NA	NA
WP_011436484.1\|2979611_2981252_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_049760916.1\|2981465_2982572_+	hypothetical protein	NA	NA	NA	NA
WP_011436931.1\|2982678_2984442_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.4e-15	35.7
WP_157858592.1\|2984640_2984805_-	hypothetical protein	NA	NA	NA	NA
WP_152987866.1\|2985539_2985869_-	hypothetical protein	NA	NA	NA	NA
WP_023842136.1\|2987094_2987670_-	hypothetical protein	NA	NA	NA	NA
WP_035734135.1\|2988793_2989669_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_011436935.1\|2989665_2990505_+	RNA polymerase sigma factor SigJ	NA	NA	NA	NA
WP_148214938.1\|2990755_2992210_-	recombinase family protein	A0A1B1PA72	Streptomyces_phage	4.6e-44	30.8
WP_011435569.1\|2992298_2993132_-\|transposase	IS5-like element ISFsp7 family transposase	NA	NA	NA	NA
WP_011434618.1\|2993559_2994333_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_011436937.1\|2994610_2995057_-	hypothetical protein	NA	NA	NA	NA
WP_023842285.1\|2995274_2995922_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011436484.1\|2996003_2997644_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_011434596.1\|2998055_2999480_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_11

3168785 : 3222922

uncultured_Mediterranean_phage(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011437080.1\|3168785_3169358_-\|transposase	IS607 family transposase	F9VHY9	Thermus_phage	1.8e-20	33.3
WP_193359370.1\|3170455_3170791_+	hypothetical protein	NA	NA	NA	NA
WP_049760926.1\|3171334_3171670_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_011437082.1\|3171674_3172805_+	Rieske 2Fe-2S domain-containing protein	F2Y2Q3	Organic_Lake_phycodnavirus	3.2e-05	32.9
WP_035941594.1\|3172864_3173872_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_108913605.1\|3173943_3174918_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_011437085.1\|3174910_3177526_+	phosphoenolpyruvate synthase	NA	NA	NA	NA
WP_011437086.1\|3177479_3178028_+	hypothetical protein	NA	NA	NA	NA
WP_011437087.1\|3178083_3179091_+	flippase-like domain-containing protein	NA	NA	NA	NA
WP_011437088.1\|3179136_3179457_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_108913606.1\|3179624_3180383_+	hypothetical protein	NA	NA	NA	NA
WP_011437090.1\|3180387_3181107_+	hypothetical protein	NA	NA	NA	NA
WP_076806164.1\|3181206_3181632_-	protein phosphatase	NA	NA	NA	NA
WP_011437092.1\|3181891_3182377_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_157493398.1\|3182517_3182685_+	hypothetical protein	NA	NA	NA	NA
WP_023840970.1\|3183090_3184626_-	hypothetical protein	NA	NA	NA	NA
WP_011437095.1\|3184937_3185465_-	hypothetical protein	NA	NA	NA	NA
WP_011437096.1\|3185482_3186106_-	ATP-binding protein	NA	NA	NA	NA
WP_011437097.1\|3186102_3186447_-	hypothetical protein	NA	NA	NA	NA
WP_011437098.1\|3186593_3187442_+	helix-turn-helix domain-containing protein	I4AZQ1	Saccharomonospora_phage	2.0e-44	42.3
WP_011437099.1\|3187438_3187642_+	DUF397 domain-containing protein	NA	NA	NA	NA
WP_049760812.1\|3188033_3189317_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011437100.1\|3189401_3191198_-\|tRNA	arginine--tRNA ligase	M1PAX3	Moumouvirus	2.5e-84	36.9
WP_011436467.1\|3191310_3191754_-	hypothetical protein	NA	NA	NA	NA
WP_011435557.1\|3191772_3192609_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_041257917.1\|3192674_3193187_-	hypothetical protein	NA	NA	NA	NA
WP_011434597.1\|3193245_3194436_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011437101.1\|3194666_3194969_-	hypothetical protein	NA	NA	NA	NA
WP_108913881.1\|3194965_3195781_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_148214915.1\|3195912_3197304_-	pyridoxal-dependent decarboxylase	S4W1T5	Pandoravirus	3.9e-08	25.8
WP_011434597.1\|3197529_3198720_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_131728915.1\|3198765_3199035_-	hypothetical protein	NA	NA	NA	NA
WP_108913773.1\|3199231_3199684_+	nucleoside deaminase	NA	NA	NA	NA
WP_011437106.1\|3200755_3201793_+	replication-relaxation family protein	NA	NA	NA	NA
WP_011437107.1\|3202097_3202613_+	hypothetical protein	NA	NA	NA	NA
WP_011437108.1\|3203106_3203442_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011437109.1\|3203443_3204160_+	cation transporter	NA	NA	NA	NA
WP_011437110.1\|3205290_3206085_+	hypothetical protein	NA	NA	NA	NA
WP_055725631.1\|3206960_3208529_-	recombinase family protein	A0A0K1Y917	Streptomyces_phage	2.1e-26	28.6
WP_035958605.1\|3208525_3209110_-	hypothetical protein	NA	NA	NA	NA
WP_108913772.1\|3209052_3209430_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_157493474.1\|3209682_3209859_-	hypothetical protein	NA	NA	NA	NA
WP_011437116.1\|3210653_3211067_-	hypothetical protein	NA	NA	NA	NA
WP_023841739.1\|3211357_3211585_-	hypothetical protein	NA	NA	NA	NA
WP_011437117.1\|3211647_3212193_-	hypothetical protein	NA	NA	NA	NA
WP_011437118.1\|3212636_3216959_-	hypothetical protein	A0A1B1IUC6	uncultured_Mediterranean_phage	1.7e-46	27.5
WP_035958600.1\|3216955_3220279_-	helicase	A0A1B1IUI1	uncultured_Mediterranean_phage	3.3e-98	29.4
WP_011437121.1\|3221029_3221947_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_011437123.1\|3222649_3222922_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_12

4007694 : 4080566

uncultured_Mediterranean_phage(20.0%)

transposase,integrase,tRNA

attL 4018326:4018365|attR 4032686:4032725

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023842148.1\|4007694_4008573_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.6e-44	39.0
WP_070133240.1\|4008609_4009746_+\|tRNA	queuine tRNA-ribosyltransferase family protein	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.7e-41	29.4
WP_011437760.1\|4009748_4010459_+	7-cyano-7-deazaguanine synthase QueC	A0A0D4D9V8	Escherichia_phage	1.7e-23	35.2
WP_011437761.1\|4010460_4011099_+	7-carboxy-7-deazaguanine synthase	A0A088FAQ4	Vibrio_phage	1.6e-14	30.3
WP_011437762.1\|4011098_4011473_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_011437763.1\|4011469_4012336_+	16S rRNA methyltransferase	NA	NA	NA	NA
WP_085949899.1\|4012455_4012785_+	preQ(1) synthase	E7DN65	Pneumococcus_phage	7.2e-14	42.6
WP_035942159.1\|4013309_4014035_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_023842153.1\|4014055_4014901_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	3.9e-11	43.0
WP_108913880.1\|4016652_4017981_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	1.1e-17	24.1
WP_167534319.1\|4018014_4018194_-	hypothetical protein	NA	NA	NA	NA
4018326:4018365	attL	NA	NA	NA	NA
WP_011437769.1\|4018556_4019699_+\|integrase	site-specific integrase	A0A0U4B2E0	Arthrobacter_phage	2.7e-52	37.2
WP_035734610.1\|4019991_4020651_+	hypothetical protein	NA	NA	NA	NA
WP_011437771.1\|4021129_4022569_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023841973.1\|4022966_4023293_+	DUF397 domain-containing protein	NA	NA	NA	NA
WP_041257976.1\|4023285_4023558_+	hypothetical protein	NA	NA	NA	NA
WP_083771087.1\|4023643_4024309_+	hypothetical protein	NA	NA	NA	NA
WP_023841509.1\|4024305_4024734_+	hypothetical protein	NA	NA	NA	NA
WP_011437774.1\|4025042_4027232_-	protein kinase	A0A1B1IUU3	uncultured_Mediterranean_phage	2.0e-11	33.1
WP_035733686.1\|4027234_4027648_-	hypothetical protein	NA	NA	NA	NA
WP_023841510.1\|4028166_4028340_+	hypothetical protein	NA	NA	NA	NA
WP_023841511.1\|4028339_4028597_+	hypothetical protein	NA	NA	NA	NA
WP_011437776.1\|4028578_4028914_+	hypothetical protein	NA	NA	NA	NA
WP_011437777.1\|4028998_4030681_+	cell division protein FtsK	NA	NA	NA	NA
WP_011437779.1\|4032226_4032430_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011437780.1\|4033154_4033517_+	hypothetical protein	NA	NA	NA	NA
4032686:4032725	attR	NA	NA	NA	NA
WP_011437781.1\|4034182_4034671_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_011437782.1\|4035139_4037248_+	FTR1 family protein	NA	NA	NA	NA
WP_011437783.1\|4037244_4038513_+	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
WP_011437784.1\|4038702_4040217_-	DUF839 domain-containing protein	NA	NA	NA	NA
WP_011437785.1\|4040631_4041969_+	GNAT family N-acetyltransferase	R4TQL5	Phaeocystis_globosa_virus	1.5e-22	32.0
WP_157858569.1\|4042319_4043345_-	hypothetical protein	NA	NA	NA	NA
WP_082456771.1\|4043701_4045042_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	6.2e-64	32.7
WP_011437788.1\|4045288_4050550_-	hypothetical protein	NA	NA	NA	NA
WP_011437789.1\|4050546_4051671_-	serine/threonine protein kinase	NA	NA	NA	NA
WP_011437790.1\|4051667_4053557_-	FHA domain-containing protein	NA	NA	NA	NA
WP_011437791.1\|4053574_4054945_-	VWA domain-containing protein	NA	NA	NA	NA
WP_131728931.1\|4054944_4057149_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_023841517.1\|4057493_4058081_+	hypothetical protein	NA	NA	NA	NA
WP_023841518.1\|4058179_4058887_+	hypothetical protein	NA	NA	NA	NA
WP_082456772.1\|4059276_4060290_+	alpha/beta fold hydrolase	R4JP33	Mycobacterium_phage	1.0e-05	27.4
WP_011437795.1\|4060597_4061644_+	aldo/keto reductase	NA	NA	NA	NA
WP_035733690.1\|4061938_4062127_+	hypothetical protein	NA	NA	NA	NA
WP_011437797.1\|4062258_4062696_-	SsgA family sporulation/cell division regulator	NA	NA	NA	NA
WP_011437798.1\|4063070_4065767_-	protein kinase	A0A1B1IUU3	uncultured_Mediterranean_phage	6.1e-10	30.4
WP_049761114.1\|4065879_4066473_-	hypothetical protein	NA	NA	NA	NA
WP_139140041.1\|4066930_4067542_+	hypothetical protein	NA	NA	NA	NA
WP_049761115.1\|4067836_4068406_+	hypothetical protein	NA	NA	NA	NA
WP_108913586.1\|4068655_4069081_+	hypothetical protein	NA	NA	NA	NA
WP_085949878.1\|4069432_4070560_+	twin-arginine translocation pathway signal protein	NA	NA	NA	NA
WP_011437802.1\|4070856_4071639_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_011437803.1\|4071719_4072847_-	phosphotransferase	NA	NA	NA	NA
WP_076806976.1\|4073687_4073870_-	hypothetical protein	NA	NA	NA	NA
WP_131728932.1\|4074693_4074978_+	hypothetical protein	NA	NA	NA	NA
WP_167534320.1\|4075185_4077648_+	helicase-associated domain-containing protein	NA	NA	NA	NA
WP_011437807.1\|4077788_4078208_-	ester cyclase	NA	NA	NA	NA
WP_131728933.1\|4078308_4078605_-	hypothetical protein	NA	NA	NA	NA
WP_011437809.1\|4078668_4079997_-\|transposase	transposase	A0A7P9	Microcystis_virus	8.1e-56	37.6
WP_035959263.1\|4079993_4080566_-\|transposase	IS607 family transposase	F9VHY9	Thermus_phage	1.2e-21	34.8

DBSCAN-SWA_13

4730358 : 4799617

Erysipelothrix_phage(14.29%)

transposase,bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011438325.1\|4730358_4730952_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_035732506.1\|4730985_4731606_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_035732552.1\|4731783_4732359_-	hypothetical protein	NA	NA	NA	NA
WP_011438328.1\|4732448_4733024_-	hypothetical protein	NA	NA	NA	NA
WP_085949903.1\|4733130_4733412_-	hypothetical protein	NA	NA	NA	NA
WP_035732549.1\|4733510_4733699_-	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_049760995.1\|4734205_4734703_-	hypothetical protein	NA	NA	NA	NA
WP_011438331.1\|4734699_4735185_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_049761137.1\|4735550_4736642_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_011438333.1\|4736638_4738477_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2I4R674	Erysipelothrix_phage	3.9e-40	27.8
WP_023840057.1\|4738502_4739522_-	acyl-CoA desaturase	NA	NA	NA	NA
WP_082456604.1\|4740131_4741835_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	NA	NA	NA
WP_011438336.1\|4742104_4743079_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	7.8e-48	38.0
WP_011438337.1\|4743190_4744216_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_082456606.1\|4744278_4745139_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_011438339.1\|4745150_4745975_-	TatD family hydrolase	NA	NA	NA	NA
WP_023840053.1\|4747429_4747981_+	hypothetical protein	NA	NA	NA	NA
WP_035732497.1\|4747994_4748909_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	5.4e-35	36.8
WP_011438343.1\|4748949_4750659_+	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA
WP_006541195.1\|4751060_4751258_+	hypothetical protein	NA	NA	NA	NA
WP_035909299.1\|4751299_4751848_-	hypothetical protein	NA	NA	NA	NA
WP_011438346.1\|4752238_4754023_+	glycoside hydrolase family 15 protein	NA	NA	NA	NA
WP_011438347.1\|4754236_4755577_+	FHA domain-containing protein	NA	NA	NA	NA
WP_011438348.1\|4755617_4756433_+	DUF305 domain-containing protein	NA	NA	NA	NA
WP_011438349.1\|4756543_4758124_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.5e-117	52.3
WP_011438350.1\|4758196_4759327_+	family 43 glycosylhydrolase	NA	NA	NA	NA
WP_011438351.1\|4759489_4759894_+	VOC family protein	NA	NA	NA	NA
WP_108913684.1\|4760047_4761061_+	thioesterase family protein	NA	NA	NA	NA
WP_108913688.1\|4761086_4762511_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	3.6e-54	37.6
WP_011438354.1\|4762820_4763627_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011438355.1\|4763863_4766062_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_011438356.1\|4766089_4766608_-	hypothetical protein	NA	NA	NA	NA
WP_108913600.1\|4766908_4767499_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_011438358.1\|4767648_4768056_+	TOBE domain-containing protein	NA	NA	NA	NA
WP_023840046.1\|4768265_4769102_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA
WP_108913689.1\|4769200_4769842_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.4e-24	36.3
WP_035909281.1\|4770101_4771430_-	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_049760996.1\|4772356_4772908_+	hypothetical protein	NA	NA	NA	NA
WP_011438364.1\|4774856_4776047_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011438365.1\|4776381_4776894_-	hypothetical protein	NA	NA	NA	NA
WP_157858593.1\|4776890_4777508_-	hypothetical protein	NA	NA	NA	NA
WP_043590376.1\|4778673_4779210_-	flavoprotein	NA	NA	NA	NA
WP_085949882.1\|4779224_4780817_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_035959242.1\|4780958_4781741_-\|bacteriocin	thiopeptide-type bacteriocin biosynthesis protein	NA	NA	NA	NA
WP_011438371.1\|4781755_4782484_-	hypothetical protein	NA	NA	NA	NA
WP_011435557.1\|4782394_4783231_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011438373.1\|4783249_4783693_+	hypothetical protein	NA	NA	NA	NA
WP_011434965.1\|4784115_4785849_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_011438374.1\|4785900_4786197_-	AMP-binding protein	NA	NA	NA	NA
WP_011438375.1\|4786270_4786891_-	hypothetical protein	NA	NA	NA	NA
WP_011438376.1\|4787363_4787897_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_049760998.1\|4787953_4789228_+	MFS transporter	NA	NA	NA	NA
WP_035959288.1\|4789311_4789506_-	hypothetical protein	NA	NA	NA	NA
WP_011438373.1\|4789581_4790025_-	hypothetical protein	NA	NA	NA	NA
WP_011435557.1\|4790043_4790880_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_108913871.1\|4792389_4793136_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_011438382.1\|4793297_4796630_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	5.0e-62	27.1
WP_011438383.1\|4796626_4797937_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_011434596.1\|4798192_4799617_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_14

4870448 : 4969345

Escherichia_phage(45.45%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011434597.1\|4870448_4871639_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_035959121.1\|4871697_4872105_+	hypothetical protein	NA	NA	NA	NA
WP_049761006.1\|4872457_4873222_-	PIG-L family deacetylase	NA	NA	NA	NA
WP_011438438.1\|4873985_4874981_-	MoxR family ATPase	NA	NA	NA	NA
WP_023841005.1\|4876160_4876325_+	hypothetical protein	NA	NA	NA	NA
WP_023841006.1\|4876435_4876753_-	hypothetical protein	NA	NA	NA	NA
WP_023841007.1\|4877199_4877739_-	hypothetical protein	NA	NA	NA	NA
WP_011438441.1\|4878336_4881006_+	FUSC family protein	NA	NA	NA	NA
WP_108913553.1\|4881082_4881745_-	hypothetical protein	NA	NA	NA	NA
WP_011438444.1\|4882549_4883365_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_162238926.1\|4883450_4885685_-	MMPL family transporter	NA	NA	NA	NA
WP_011438446.1\|4886730_4886877_-	hypothetical protein	NA	NA	NA	NA
WP_011438447.1\|4886964_4887372_-	hypothetical protein	NA	NA	NA	NA
WP_011438449.1\|4888402_4891954_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	0.0e+00	57.7
WP_011438450.1\|4892149_4892860_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.7e-36	39.4
WP_023842258.1\|4893130_4893358_+	DUF433 domain-containing protein	NA	NA	NA	NA
WP_011438451.1\|4893354_4893723_+	DUF5615 family PIN-like protein	NA	NA	NA	NA
WP_035912346.1\|4894048_4894366_+	recombinase family protein	NA	NA	NA	NA
WP_011438453.1\|4894547_4895555_+	recombinase zinc beta ribbon domain-containing protein	NA	NA	NA	NA
WP_011438454.1\|4895551_4895929_-	hypothetical protein	NA	NA	NA	NA
WP_108913846.1\|4895925_4897209_-	replication initiation protein	NA	NA	NA	NA
WP_011438456.1\|4897932_4898256_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_011438457.1\|4898271_4899783_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_162238925.1\|4900045_4900306_+	hypothetical protein	NA	NA	NA	NA
WP_011438458.1\|4900245_4900587_+	hypothetical protein	NA	NA	NA	NA
WP_011438459.1\|4900639_4901824_+	adenosylhomocysteinase	NA	NA	NA	NA
WP_011438460.1\|4901830_4902394_+	NUDIX hydrolase	NA	NA	NA	NA
WP_011438461.1\|4903545_4903812_-	hypothetical protein	NA	NA	NA	NA
WP_035958970.1\|4905008_4905899_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_011438465.1\|4905937_4906897_-	SRPBCC family protein	NA	NA	NA	NA
WP_011438466.1\|4906911_4907175_-	acyl carrier protein	NA	NA	NA	NA
WP_011438467.1\|4907250_4908453_-	ketosynthase chain-length factor	NA	NA	NA	NA
WP_011438468.1\|4908449_4909724_-	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	NA	NA	NA	NA
WP_011438469.1\|4909747_4910893_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_023841932.1\|4910922_4911708_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_011438471.1\|4911900_4912350_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_011438472.1\|4912418_4913333_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_011438473.1\|4913338_4914028_+	DsbA family oxidoreductase	NA	NA	NA	NA
WP_035912354.1\|4914060_4914738_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.5e-37	40.8
WP_011438475.1\|4914871_4915120_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_011438476.1\|4915116_4915500_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_023841936.1\|4915558_4916236_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	5.2e-35	39.8
WP_011438478.1\|4916316_4916844_+	cytochrome P450	NA	NA	NA	NA
WP_035958968.1\|4916859_4917468_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_049761030.1\|4917446_4917935_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041258026.1\|4917985_4918180_+	hypothetical protein	NA	NA	NA	NA
WP_049761007.1\|4918216_4918492_-	hypothetical protein	NA	NA	NA	NA
WP_049760812.1\|4918845_4920129_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_023842267.1\|4920468_4920897_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_011438481.1\|4920936_4921197_+	hypothetical protein	NA	NA	NA	NA
WP_011438482.1\|4921228_4921750_-	hypothetical protein	NA	NA	NA	NA
WP_011438483.1\|4921757_4922270_-	hypothetical protein	NA	NA	NA	NA
WP_023842273.1\|4922780_4923980_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011437816.1\|4924559_4925798_-\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	1.2e-40	28.3
WP_011438487.1\|4926106_4927405_+	recombinase family protein	A0A1B1PA72	Streptomyces_phage	4.5e-35	29.1
WP_011438488.1\|4927401_4927776_-	hypothetical protein	NA	NA	NA	NA
WP_011438489.1\|4927772_4929218_-	hypothetical protein	NA	NA	NA	NA
WP_108913848.1\|4929711_4930227_-	hypothetical protein	NA	NA	NA	NA
WP_035734445.1\|4930246_4930486_-	hypothetical protein	NA	NA	NA	NA
WP_157858584.1\|4930650_4931349_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
WP_131728953.1\|4931450_4932287_-	hypothetical protein	NA	NA	NA	NA
WP_049761008.1\|4932337_4932847_-	hypothetical protein	NA	NA	NA	NA
WP_011438495.1\|4932997_4934248_-	helix-turn-helix domain-containing protein	A0A142K650	Streptomyces_phage	1.4e-65	41.1
WP_011438496.1\|4935064_4935454_-	flavin reductase family protein	NA	NA	NA	NA
WP_011438497.1\|4935477_4936791_-	NDP-hexose 2,3-dehydratase family protein	NA	NA	NA	NA
WP_035734442.1\|4937109_4937817_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011438499.1\|4937859_4938318_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_011438500.1\|4938511_4939219_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_011438501.1\|4939457_4940369_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_011438502.1\|4940478_4941450_-	hydroxylacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_011438503.1\|4941538_4942603_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_011438504.1\|4942652_4943105_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_011438505.1\|4943149_4944283_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_011438506.1\|4944350_4945307_-	SRPBCC family protein	NA	NA	NA	NA
WP_011438508.1\|4945747_4947202_+\|transposase	IS66-like element ISFsp10 family transposase	NA	NA	NA	NA
WP_011438509.1\|4947320_4947881_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_011438510.1\|4947970_4948267_-	acyl carrier protein	NA	NA	NA	NA
WP_011438511.1\|4948291_4949206_-	beta-ketoacyl synthase	NA	NA	NA	NA
WP_041258031.1\|4949229_4949940_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.0e-36	42.3
WP_035942187.1\|4949867_4950491_-	DUF1205 domain-containing protein	NA	NA	NA	NA
WP_011438514.1\|4950606_4951554_-	aromatase/cyclase	NA	NA	NA	NA
WP_011438515.1\|4951638_4952730_-	hypothetical protein	NA	NA	NA	NA
WP_011438516.1\|4953358_4954309_+	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_011438517.1\|4954305_4955757_+	DHA2 family efflux MFS transporter permease subunit	A0A0M3UL24	Mycobacterium_phage	3.2e-21	28.0
WP_011434597.1\|4956006_4957197_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_083503478.1\|4957463_4957709_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_011438518.1\|4958180_4958489_+	hypothetical protein	NA	NA	NA	NA
WP_011438519.1\|4958488_4958881_+	hypothetical protein	NA	NA	NA	NA
WP_011438520.1\|4959582_4960794_-	helix-turn-helix transcriptional regulator	A0A0R8V0C3	Thermobifida_phage	1.0e-44	34.6
WP_083503477.1\|4960961_4961399_+	DUF397 domain-containing protein	NA	NA	NA	NA
WP_167534321.1\|4961391_4961664_+	hypothetical protein	NA	NA	NA	NA
WP_148214924.1\|4961821_4962412_+	hypothetical protein	NA	NA	NA	NA
WP_011438523.1\|4962408_4962936_+	hypothetical protein	NA	NA	NA	NA
WP_035959318.1\|4963791_4965078_+	hypothetical protein	NA	NA	NA	NA
WP_011438525.1\|4965074_4965581_+	hypothetical protein	NA	NA	NA	NA
WP_011438526.1\|4965577_4967083_-	recombinase family protein	NA	NA	NA	NA
WP_011438527.1\|4967114_4967456_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_041258044.1\|4968634_4969345_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	5.9e-37	39.9

DBSCAN-SWA_15

5014669 : 5075206

Brazilian_cedratvirus(12.5%)

bacteriocin,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_108913841.1\|5014669_5015668_+\|bacteriocin	thiopeptide-type bacteriocin biosynthesis protein	NA	NA	NA	NA
WP_011438563.1\|5015670_5016588_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	5.3e-22	34.5
WP_011438564.1\|5016638_5017376_+	ABC transporter permease	NA	NA	NA	NA
WP_035941780.1\|5017445_5019080_-	bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	NA	NA	NA	NA
WP_085949905.1\|5019373_5019526_+\|bacteriocin	thiazolylpeptide-type bacteriocin	NA	NA	NA	NA
WP_011438566.1\|5019606_5021232_+	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
WP_082456775.1\|5021117_5022065_+	2-amino-4,5-dihydroxy-6-one-heptanoic acid-7-phosphate synthase	NA	NA	NA	NA
WP_049761014.1\|5021988_5023158_+	3-dehydroquinate synthase II family protein	NA	NA	NA	NA
WP_011438569.1\|5023180_5024401_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_131728951.1\|5024435_5025500_+	hypothetical protein	NA	NA	NA	NA
WP_011438570.1\|5025555_5026161_-	response regulator transcription factor	NA	NA	NA	NA
WP_035958930.1\|5026683_5027682_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.6e-38	36.2
WP_011438575.1\|5030771_5032019_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_011435467.1\|5032856_5034080_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_049760812.1\|5034799_5036083_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_011438578.1\|5036962_5037415_+	hypothetical protein	NA	NA	NA	NA
WP_049760812.1\|5037635_5038919_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_083503475.1\|5040135_5040474_-\|transposase	transposase family protein	NA	NA	NA	NA
WP_041258262.1\|5041867_5043121_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_011438583.1\|5043484_5044075_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_011438585.1\|5045792_5047196_+	cyclic nucleotide-binding domain-containing protein	A0A2K9L690	Tupanvirus	3.5e-25	33.0
WP_011438586.1\|5047525_5049781_+	terpene synthase	NA	NA	NA	NA
WP_108913469.1\|5049781_5050456_-	SagB family peptide dehydrogenase	NA	NA	NA	NA
WP_011438588.1\|5050564_5051902_-	YcaO-like family protein	NA	NA	NA	NA
WP_108913844.1\|5051911_5053216_-	YcaO-like family protein	NA	NA	NA	NA
WP_011438590.1\|5053308_5054922_-	CocE/NonD family hydrolase	NA	NA	NA	NA
WP_108913843.1\|5054932_5055847_-	TOMM precursor leader peptide-binding protein	NA	NA	NA	NA
WP_083282201.1\|5056216_5057545_-	MFS transporter	NA	NA	NA	NA
WP_011438594.1\|5057601_5058603_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011438595.1\|5058635_5059493_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-12	30.0
WP_108913436.1\|5059489_5060575_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	2.9e-11	24.9
WP_011438597.1\|5060833_5062768_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.5e-30	26.6
WP_035941453.1\|5063025_5064399_+	lipase	NA	NA	NA	NA
WP_011438599.1\|5065286_5066936_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.5e-08	39.0
WP_011438600.1\|5067611_5067992_+	transglycosylase family protein	NA	NA	NA	NA
WP_011438601.1\|5068197_5069289_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_011438602.1\|5069531_5069855_+	hypothetical protein	NA	NA	NA	NA
WP_023840700.1\|5070279_5071395_+	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_011438605.1\|5071935_5073579_+	FHA domain-containing protein	NA	NA	NA	NA
WP_011438606.1\|5073631_5075206_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	1.2e-37	29.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_007777

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection