CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_008024	Streptococcus pyogenes MGAS10750, complete sequence	1 crisprs	DinG,csm6,cas9,cas1,cas2,csn2,cas4,cas7,cas8c,cas5,cas3,DEDDh,RT,csa3	2	8	6	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_008024_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008024_1

1317063-1317423

TypeI

I-C

Consensus_repeat	Method
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRISPRCasFinder
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	CRT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	PILER-CR

5 spacers

cas2,cas1,cas4,cas7,cas8c,cas5

The CRISPR arrays of NC_008024_1

>merge|NC_008024|1|1317063-1317423|CRISPRCasFinder,CRT,PILER-CR
CTTTCAATCCACTCACCCATGAAGGGTGAGACCACTCTTACTTTGAGAGTAAAGAAGCTCATGAAATTTCAATCCACTCACCCATAAAGGGTGAGACTATGTGGGTGTATTGGCTAGTCATGTAATTATTTATTTCAATCCACTCACCCATGAAGGGTGAGACGCTTAAAATCGGTATTGTAACTGGTATCATCTTAGATTTCAATCCACTCACCCATGAAGGGTGAGACTGACTCTATTATTGATTGAGGAGGTGACGAAATATTTCAATCCACTCACCCATGAAGGGTGAGACGGTAAGATTAATACCGGCTATCTCAACGCTAGTAATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NC_008024|1|1|1317063-1317423|CRISPRCasFinder
CTTTCAATCCACTCACCCATGAAGGGTGAGAC	CACTCTTACTTTGAGAGTAAAGAAGCTCATGAA
ATTTCAATCCACTCACCCATAAAGGGTGAGAC	TATGTGGGTGTATTGGCTAGTCATGTAATTATTT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTTAAAATCGGTATTGTAACTGGTATCATCTTAG
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	TGACTCTATTATTGATTGAGGAGGTGACGAAAT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GGTAAGATTAATACCGGCTATCTCAACGCTAGTA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NC_008024|1|1|1317063-1317423|CRT
CTTTCAATCCACTCACCCATGAAGGGTGAGAC	CACTCTTACTTTGAGAGTAAAGAAGCTCATGAA
ATTTCAATCCACTCACCCATAAAGGGTGAGAC	TATGTGGGTGTATTGGCTAGTCATGTAATTATTT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GCTTAAAATCGGTATTGTAACTGGTATCATCTTAG
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	TGACTCTATTATTGATTGAGGAGGTGACGAAAT
ATTTCAATCCACTCACCCATGAAGGGTGAGAC	GGTAAGATTAATACCGGCTATCTCAACGCTAGTA
ATTTCAATCCACTCACCCATGAAGGGTGAGAC

>NC_008024|1|1|1317064-1317423|PILER-CR
TTTCAATCCACTCACCCATGAAGGGTGAGACC	ACTCTTACTTTGAGAGTAAAGAAGCTCATGAAA
TTTCAATCCACTCACCCATAAAGGGTGAGACT	ATGTGGGTGTATTGGCTAGTCATGTAATTATTTA
TTTCAATCCACTCACCCATGAAGGGTGAGACG	CTTAAAATCGGTATTGTAACTGGTATCATCTTAGA
TTTCAATCCACTCACCCATGAAGGGTGAGACT	GACTCTATTATTGATTGAGGAGGTGACGAAATA
TTTCAATCCACTCACCCATGAAGGGTGAGACG	GTAAGATTAATACCGGCTATCTCAACGCTAGTAA
TTTCAATCCACTCACCCATGAAGGGTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008024.1\|WP_011528827.1\|1315556_1316180_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NC_008024.1\|WP_011528825.1\|1313579_1314320_-\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NC_008024.1\|WP_011284984.1\|1318897_1319572_-\|CRISPR-associated-protein-Cas4	cas4	COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B	gnl\|CDD\|224385
NC_008024.1\|WP_021299338.1\|1327985_1328549_-\|ATPase-AAA	unknown	unknown	gnl\|CDD\|223637
NC_008024.1\|WP_002983750.1\|1329566_1329821_-\|DUF1912-family-protein	unknown	unknown	gnl\|CDD\|286073
NC_008024.1\|WP_011528831.1\|1322321_1323050_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NC_008024.1\|WP_011528830.1\|1320426_1322322_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
NC_008024.1\|WP_002983795.1\|1308505_1309186_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NC_008024.1\|WP_002989018.1\|1329150_1329546_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181104
NC_008024.1\|WP_002983792.1\|1309327_1309801_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NC_008024.1\|WP_011284983.1\|1317875_1318901_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_008024.1\|WP_011528822.1\|1309967_1310684_-\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
NC_008024.1\|WP_002983803.1\|1306996_1308232_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NC_008024.1\|WP_011528826.1\|1314407_1315514_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|184456
NC_008024.1\|WP_011528824.1\|1311849_1313583_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NC_008024.1\|WP_002989044.1\|1317571_1317865_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|224262
NC_008024.1\|WP_011528823.1\|1310697_1311777_-\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NC_008024.1\|WP_011528828.1\|1316192_1316903_-\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	unknown	unknown	gnl\|CDD\|223856
NC_008024.1\|WP_021299321.1\|1319573_1320422_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NC_008024.1\|WP_011528834.1\|1325335_1327984_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582

Protein	Function_ID	Function_description	E-value
NC_008024.1\|WP_011528827.1\|1315556_1316180_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.52991e-34
NC_008024.1\|WP_011528825.1\|1313579_1314320_-\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.6473e-83
NC_008024.1\|WP_011284984.1\|1318897_1319572_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	3.0744e-43
NC_008024.1\|WP_021299338.1\|1327985_1328549_-\|ATPase-AAA	gnl\|CDD\|223637	COG0563, Adk, Adenylate kinase and related kinases [Nucleotide transport and metabolism].	0.00782951
NC_008024.1\|WP_002983750.1\|1329566_1329821_-\|DUF1912-family-protein	gnl\|CDD\|286073	pfam08930, DUF1912, Domain of unknown function (DUF1912). This domain has no known function. It is found in various Streptococcal proteins.	3.74168e-47
NC_008024.1\|WP_011528831.1\|1322321_1323050_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	1.63992e-116
NC_008024.1\|WP_011528830.1\|1320426_1322322_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	0
NC_008024.1\|WP_002983795.1\|1308505_1309186_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.46736e-40
NC_008024.1\|WP_002989018.1\|1329150_1329546_-\|hypothetical-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	0.000151325
NC_008024.1\|WP_002983792.1\|1309327_1309801_+\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.23847e-66
NC_008024.1\|WP_011284983.1\|1317875_1318901_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_008024.1\|WP_011528822.1\|1309967_1310684_-\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	2.72904e-105
NC_008024.1\|WP_002983803.1\|1306996_1308232_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NC_008024.1\|WP_011528826.1\|1314407_1315514_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	1.00806e-161
NC_008024.1\|WP_011528824.1\|1311849_1313583_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	4.25578e-64
NC_008024.1\|WP_002989044.1\|1317571_1317865_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|224262	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms].	1.60225e-34
NC_008024.1\|WP_011528823.1\|1310697_1311777_-\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	4.76739e-34
NC_008024.1\|WP_011528828.1\|1316192_1316903_-\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	1.43593e-43
NC_008024.1\|WP_021299321.1\|1319573_1320422_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	6.49658e-159
NC_008024.1\|WP_011528834.1\|1325335_1327984_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0

>NC_008024.1|WP_011528828.1|1316192_1316903_-|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2
MTLSLVLMVSVFGAGLLSFFSPCIFPVLPVYLGILLDADDSKTITIFDKKLYWYGIVKTLAFIFGLSTIFVILGYGAGFLGNILYAVWFRYLLGALVIILGIHQMGLITIKSLQFQKSLTFHNNKNRNGLFNAFILGLTFSFGWTPCVGPVLSSVLALVASGGNGAWQGGVLMIIYTLGLGIPFLLISFASGIVLKQFNKLKPHMLLLKKVGGVLIIVMGILLMTGTLNNLAQLFG
>NC_008024.1|WP_011528827.1|1315556_1316180_-|TlpA-family-protein-disulfide-reductase
MKKGLLVTTGLACLGLLTACSTQDNMAKKEITQDKMSMAAKKKDEMSTSKDKSMMADKTSDKKMTNDGPMAPDFELKGIDGKTYRLSEFKGKKVYLKFWASWCSICLSTLADTEDLAKMSDKDYVVLTVVSPGHQGEKSEADFTKWFQGTDYKDLPVLLDPDGKLLEAYGVRSYPTEVFIGSDGVLAKKHIGYAKKSDIKKTLKGIH
>NC_008024.1|WP_011528826.1|1314407_1315514_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MEHKWKLWLFIVGVVLLIGGASVLIQKGQAKAFSQGKPQLPAKKVKSTKVDPNAPVDQKMIYLAGGCFWGVEEYFSQVDGVLDAVSGYANGRGDTTNYQLIHQTGHAETVEVAYDANRISLKELLLHFFRIIDPTSLNKQGNDRGSQYRTGIYYTDKADLAIIDEVFKEKAKDYKKKIVVEKAPLKHFIKAEEYHQDYLKKNPNGYCHIDINQATYPVIDESKYPKPSATEIKAKLSADEYRVTQKNETEKAFSNRYWDSFDAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPLSPDVVRYKEDKSFNMTRTEVRSRSGNSHLGHAFTDGPKDQGGLRYCINSLSITFIPKADMEAKGYGYLLSSVE
>NC_008024.1|WP_011528825.1|1313579_1314320_-|response-regulator
MYSLLIVEDEYLIRQGIRSLVDFSQFKIDRVNEAENGQLAWDLFQKEPYDIVLTDINMPKLNGIQLAELIKEHAPQTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKADVEDMLGKLRKKLDLSKKTETIQELVEQPQKEVSAIAMAIHEQLADSDLTLKSLAQQLGFSPNYLSVLIKKELGMPFQDYLVQERLKKAKLLLLTSNLKIYEIAEQVGFEDMNYFSQRFKQLVGVTPSQYKKGGQA
>NC_008024.1|WP_011528824.1|1311849_1313583_-|sensor-histidine-kinase
MKRYPLLVQLISYVFVIVIALITTLGLLYYQTSSRNIRQLIERDTRQSIRQSSQFIDAYIKPLKETISVLAKNSEIKDFASQIHQENDKQVFQLMKMVLATNSDLQAAVLVTKDGRTVSTNPQLIMKTSSDMMAEPWYKAAIDRQAMPILTPARQLSLSSKKEWVVSVTQEVVDAVGHNLGVLRLDIAYPTIKASLDQLQLGRQGFAFIVNDKHEFVYHPKKSVYSSSKEMAAMKPYLAIQNGYTKDKTSFVYQKLIPNSQWTLVGVASLDQLHRVQRQIFWSFLGTGLLACLICSFATVLALRRWIRPIQQLQQVILAIQKGDRQLRAQETGSPELTDLVQQFNALLDQIDSLMVAVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSKRVVEVTKSLAKYFRLALNQGNEYIRLADELDHVSQYLFIQKQRYGDKLSYEVQGLDVYADFVIPKLILQPLVENAIYHGIKEVDRKGMIKVTVSDTAQHLMLTVWDNGKGIEDSSLTNSQSLLARGGVGLKNVDQRLKLHYGEGYHMTIHSQSDQFTEIQLSLPKMHELMADDTQENE
>NC_008024.1|WP_011528823.1|1310697_1311777_-|MmcQ/YjbR-family-DNA-binding-protein
MSLASDYFSRQTPIVEKLMAYGFEKRNNGYFYNERFMEEEFEAQLRIDEAGNIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEATPFQSMQANRLAKHITKEWSDPMDYPFEKHPDLATYRVGGKWYAMIFSLLADKLDQIPERLVGQTCEVMTVKVNPKDLPQLLQQEGIYPAYHMSKKNWISIILDDKITDDKLWTLVTQSRQLVNPNGLSNPNGPDYWVIPANLKYYDIDAEFAANDVILWTQKAGIAVGDYVLIYITAPVKSIRYVCQVLETDIPNEGYRKNPNIDKLMRLRKCQQYKDGLLSFDLMKEHGVAAVRGPRRLSPQLIAFLKEKEYFKENN
>NC_008024.1|WP_011528822.1|1309967_1310684_-|B3/4-domain-containing-protein
MVEFVADQSFWELFPDAKLGVVLLKDVQNQAESPEDVKQLLADSHELAKAYLTADNFSDNQVVQVYRKAYQHFKTKKGARSSIEALLKRVSNGQSIPSINPLVDIYNAASLRFGLPAGAEDSDSFIGDLRLTITDGGDDFYLIGDADNNSTLPNELCYKDDIGAVCRCLNWRDGERTMVTEHTKNAFLIIEALDQEGQNRLQEALKFIEGSAKMYLHAITSVHVLDKDNPHVPLFTEN
>NC_008024.1|WP_002983792.1|1309327_1309801_+|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATICGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK
>NC_008024.1|WP_002983795.1|1308505_1309186_-|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLNDFRYFSIEQFDKIVGQMEFRKAKKDHILFFEGDKRDKLFLVTSGYFKVEQSDQSGTFMYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPVDLFEDYSLENRLQMKHLYSKMSKLLELHELRVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQISGTTRETVSHVLRDLKKQELITIKGKYLTYLDKDYFLQYTK
>NC_008024.1|WP_002983803.1|1306996_1308232_-|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI
>NC_008024.1|WP_002989044.1|1317571_1317865_-|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVDIKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>NC_008024.1|WP_011284983.1|1317875_1318901_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYLGVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDREESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALEMVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDCVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGCASLALDLVEEFRSYIVDRFVFSLINKGQLQKKHFEVKENGSILMTENGRAIFIDLWQKRKHTEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>NC_008024.1|WP_011284984.1|1318897_1319572_-|CRISPR-associated-protein-Cas4
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKADNPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGKWLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQRVIVPMTSALRQEVKELAAEMQEVYQSQMLPKAAYFKNCQLCSLVDICKPRLSKKTRSVSRYINEAMTSEEMDL
>NC_008024.1|WP_021299321.1|1319573_1320422_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRNRLQDMGKSIFVQANERIEDDFRSLERRFSQHFTAKTPDKEIEEKANALWFDVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAKNNSGRSSDTMGTKHFVDYGVYVLEGSINAYFAEKTGFSQEDAEAIKEVLVSLCENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSIEEKSTYDAYQIHLNQEKLAKYEAKGLTVEILEGL
>NC_008024.1|WP_011528830.1|1320426_1322322_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFTSLLKTYEKAELADLVDHQKRSNEPVLLPIYHTSLKSNGKNIISVKLDKDGQFHKAEFMADKQMIIFPVTADSVARSGSHPAPHPLVDKFAYYSAEMGQSQYDSFHKQLNNWIDYCEEGDVKRFLTIVQQFILKPEFLTLILDSLIAPDYQHNQLKVIYFDATGKEKLIDLSACFLEFSIDQFQGFKNESVSTFKALHQSYISFVEANRENLGICNISGREEQLTDKHRGLMGNAKIISVSNKREAYKGRFREREDVFSVGYETSEKIHLMIKYLLENKNTSTWLGSSQYLINWFSDDLTNDSRLDIVSPIFDDGLEEDDDDDTPPVITLATEDNKRIGKSFIKGQKLFANDATYYVAILNKTSNGRIALKYFRQLQASQLLTNLNKWQETYSWESRSKFGKSRLRTPTFHDILNVSYGVDRDRFLELDNDNFKSDQIQKLVASLIDGKPMPQSIVKKLGNNVKERHRYRKHWYQVEQVCLAILHKQNGEEFSPMLDHTNQNRSYLFGRLLAIFELIETLRYGLDGNNNDRITNAERYWTAYTGQPTKLMMLLENKIKPYEEPLKLNRRGSWMKLEKEKEEILELLNPLLETETMEKPLDYRFIFGYYAEKNYYYTKQNTEVTESEE
>NC_008024.1|WP_011528831.1|1322321_1323050_-|type-I-C-CRISPR-associated-protein-Cas5
MYRSRDFYVRVSGQRALFTNPASKGGSERSSYSVPTRQALNGIVDAIYYKPTFTNIVTEVKVINQIQTELQGVRALLHDYSADLSYVSYLSDVVYLIKFHFVWNEDRKDLNSDRLPAKHEAIMERSIRKGGRRDVFLGTRECLGLVDDISQEEYETTVSYYNGVNIDLGIMFHSFAYPKDKKTPLKSYFTKTVMKNGVITFKAQSECDIVNTLSSYAFKAPEEIKSVNDECMEYDAMEKGEN
>NC_008024.1|WP_011528834.1|1325335_1327984_-|valine--tRNA-ligase
MTELSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEERLRGQGITRYDLGRDKFLDKVWEWKDEYATTIKEQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVDLYKKGWIYRGEFIINWDPAARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALQVATTRPETMFGDVAVAVNPEDPRYKDLIGKHVILPIVNKLIPIVGDEHADPEFGTGVVKITPAHDPNDFEVGQRHNLPQVNVMNDDGTMNELAGDFAGMDRFEARQATVAKLEELGALVNIEKRVHSVGHSERSGAVVEPRLSTQWFVKMDELAKQAMDNQETDDRVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNAEGEIYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTDVEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIEKYGADSLRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLEDAESNVAKVAASEAGNVTDQWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWEEFANWYVELTKEVLYSDNEAEKVITRSVLLYTLDKIVRLLHPIMPFVTEEIYAQYAQGSIVTVDYPVVRPAFENEAAHKGVERLKDLIRAVRNARAEVNVAPSKPITILVKTADSELEDFFTSNVNYIKRFTNPEKLEISSAIAAPELAMTSIITGAEIYLPLADLLNVEEELARLDKELAKWQKELDMVGKKLGNERFVANAKPEVIQKEKDKQADYQAKYDATQERIAEMQKIKS
>NC_008024.1|WP_021299338.1|1327985_1328549_-|ATPase-AAA
MNLIIIGAQASGKMTIGQEVARQTGMTLFHNHDSIDFVLRFMPWSQESTALIERIRFAFFETFAKTGQDMIFTIVIDFNDPNDVAMLEKIQAVFQSYDQEVLFVELKTDIEERLTRNRTENRLKHKPLKRNIEWSEQDIQSTMAYAVFNPEEPPKTLTHYQKINNTHLTAAETAQLIIQKMTHIKEN
>NC_008024.1|WP_002989018.1|1329150_1329546_-|hypothetical-protein
MAKQKNRKKALKLEMKRNGLLKKAGQVFDKAVESVETAVDKTISAGKNLVEKGSQTVENLTASKERLTLDEFAGQPVVAGIRSDLVETLYAEGIHSAQAFKEWTEKDLLALKGIGPATVKKLVENGASFKK
>NC_008024.1|WP_002983750.1|1329566_1329821_-|DUF1912-family-protein
MSYEKEFLKDFEDWVKTQIQVNQLAMATSQEVAQEDGDERAKDAFIRYESKLDAYEFLLGKFDNYKNGKAFHDIPDELFGARHY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	NC_008024.1	1249267-1249299	2	0.939
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	NC_008024.1	1249267-1249299	2	0.939

1. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to position: 1249267-1249299, mismatch: 2, identity: 0.939

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagggtaaaaaagctcatgaa	Protospacer
***************.*****.***********

2. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to position: 1249267-1249299, mismatch: 2, identity: 0.939

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagggtaaaaaagctcatgaa	Protospacer
***************.*****.***********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448771	Streptococcus phage Javan481, complete genome	6934-6966	0	1.0
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448681	Streptococcus phage Javan141, complete genome	6532-6564	0	1.0
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448944	Streptococcus phage Javan452, complete genome	11198-11230	0	1.0
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448672	Streptococcus phage Javan117, complete genome	6780-6812	0	1.0
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448849	Streptococcus phage Javan128, complete genome	6683-6715	0	1.0
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448774	Streptococcus phage Javan487, complete genome	6919-6951	0	1.0
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448958	Streptococcus phage Javan486, complete genome	9163-9195	0	1.0
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448742	Streptococcus phage Javan37, complete genome	9155-9187	0	1.0
NC_008024_1	1.2\|1317160\|34\|NC_008024\|CRISPRCasFinder,CRT	1317160-1317193	34	MK448762	Streptococcus phage Javan447, complete genome	55-88	0	1.0
NC_008024_1	1.2\|1317160\|34\|NC_008024\|CRISPRCasFinder,CRT	1317160-1317193	34	MK448798	Streptococcus phage Javan533, complete genome	55-88	0	1.0
NC_008024_1	1.2\|1317160\|34\|NC_008024\|CRISPRCasFinder,CRT	1317160-1317193	34	MK448793	Streptococcus phage Javan523, complete genome	55-88	0	1.0
NC_008024_1	1.2\|1317160\|34\|NC_008024\|CRISPRCasFinder,CRT	1317160-1317193	34	MK448967	Streptococcus phage Javan510, complete genome	55-88	0	1.0
NC_008024_1	1.2\|1317160\|34\|NC_008024\|CRISPRCasFinder,CRT	1317160-1317193	34	MK448954	Streptococcus phage Javan476, complete genome	55-88	0	1.0
NC_008024_1	1.2\|1317160\|34\|NC_008024\|CRISPRCasFinder,CRT	1317160-1317193	34	NC_004588	Streptococcus prophage 315.5, complete genome	204-237	0	1.0
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448771	Streptococcus phage Javan481, complete genome	8314-8348	0	1.0
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK449010	Streptococcus phage Javan90, complete genome	10748-10782	0	1.0
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK449012	Streptococcus phage Javan94, complete genome	9759-9793	0	1.0
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448972	Streptococcus phage Javan520, complete genome	8239-8273	0	1.0
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448763	Streptococcus phage Javan451, complete genome	9432-9466	0	1.0
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448845	Streptococcus phage Javan118, complete genome	10042-10076	0	1.0
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448833	Streptococcus phage Javan87, complete genome	10748-10782	0	1.0
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448771	Streptococcus phage Javan481, complete genome	6934-6966	0	1.0
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448681	Streptococcus phage Javan141, complete genome	6532-6564	0	1.0
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448944	Streptococcus phage Javan452, complete genome	11198-11230	0	1.0
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448672	Streptococcus phage Javan117, complete genome	6780-6812	0	1.0
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448849	Streptococcus phage Javan128, complete genome	6683-6715	0	1.0
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448774	Streptococcus phage Javan487, complete genome	6919-6951	0	1.0
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448958	Streptococcus phage Javan486, complete genome	9163-9195	0	1.0
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448742	Streptococcus phage Javan37, complete genome	9155-9187	0	1.0
NC_008024_1	1.7\|1317161\|34\|NC_008024\|PILER-CR	1317161-1317194	34	MK448762	Streptococcus phage Javan447, complete genome	55-88	0	1.0
NC_008024_1	1.7\|1317161\|34\|NC_008024\|PILER-CR	1317161-1317194	34	MK448798	Streptococcus phage Javan533, complete genome	55-88	0	1.0
NC_008024_1	1.7\|1317161\|34\|NC_008024\|PILER-CR	1317161-1317194	34	MK448793	Streptococcus phage Javan523, complete genome	55-88	0	1.0
NC_008024_1	1.7\|1317161\|34\|NC_008024\|PILER-CR	1317161-1317194	34	MK448967	Streptococcus phage Javan510, complete genome	55-88	0	1.0
NC_008024_1	1.7\|1317161\|34\|NC_008024\|PILER-CR	1317161-1317194	34	MK448954	Streptococcus phage Javan476, complete genome	55-88	0	1.0
NC_008024_1	1.7\|1317161\|34\|NC_008024\|PILER-CR	1317161-1317194	34	NC_004588	Streptococcus prophage 315.5, complete genome	204-237	0	1.0
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448771	Streptococcus phage Javan481, complete genome	8314-8348	0	1.0
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK449010	Streptococcus phage Javan90, complete genome	10748-10782	0	1.0
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK449012	Streptococcus phage Javan94, complete genome	9759-9793	0	1.0
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448972	Streptococcus phage Javan520, complete genome	8239-8273	0	1.0
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448763	Streptococcus phage Javan451, complete genome	9432-9466	0	1.0
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448845	Streptococcus phage Javan118, complete genome	10042-10076	0	1.0
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448833	Streptococcus phage Javan87, complete genome	10748-10782	0	1.0
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448767	Streptococcus phage Javan467, complete genome	6872-6904	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448973	Streptococcus phage Javan522, complete genome	8839-8871	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448862	Streptococcus phage Javan178, complete genome	6908-6940	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448942	Streptococcus phage Javan448, complete genome	6871-6903	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK449010	Streptococcus phage Javan90, complete genome	9367-9399	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK449012	Streptococcus phage Javan94, complete genome	8201-8233	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	6977-7009	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448969	Streptococcus phage Javan514, complete genome	9627-9659	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448943	Streptococcus phage Javan450, complete genome	6872-6904	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448972	Streptococcus phage Javan520, complete genome	6681-6713	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448786	Streptococcus phage Javan509, complete genome	6872-6904	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448778	Streptococcus phage Javan493, complete genome	8854-8886	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448963	Streptococcus phage Javan498, complete genome	3461-3493	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448773	Streptococcus phage Javan485, complete genome	9627-9659	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448851	Streptococcus phage Javan14, complete genome	12140-12172	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448833	Streptococcus phage Javan87, complete genome	9367-9399	1	0.97
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448673	Streptococcus phage Javan119, complete genome	9946-9978	1	0.97
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448862	Streptococcus phage Javan178, complete genome	8290-8324	1	0.971
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448681	Streptococcus phage Javan141, complete genome	8090-8124	1	0.971
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448672	Streptococcus phage Javan117, complete genome	8159-8193	1	0.971
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448849	Streptococcus phage Javan128, complete genome	8063-8097	1	0.971
NC_008024_1	1.3\|1317226\|35\|NC_008024\|CRISPRCasFinder,CRT	1317226-1317260	35	MK448850	Streptococcus phage Javan132, complete genome	12888-12922	1	0.971
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448767	Streptococcus phage Javan467, complete genome	6872-6904	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448973	Streptococcus phage Javan522, complete genome	8839-8871	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448862	Streptococcus phage Javan178, complete genome	6908-6940	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448942	Streptococcus phage Javan448, complete genome	6871-6903	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK449010	Streptococcus phage Javan90, complete genome	9367-9399	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK449012	Streptococcus phage Javan94, complete genome	8201-8233	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	6977-7009	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448969	Streptococcus phage Javan514, complete genome	9627-9659	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448943	Streptococcus phage Javan450, complete genome	6872-6904	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448972	Streptococcus phage Javan520, complete genome	6681-6713	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448786	Streptococcus phage Javan509, complete genome	6872-6904	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448778	Streptococcus phage Javan493, complete genome	8854-8886	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448963	Streptococcus phage Javan498, complete genome	3461-3493	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448773	Streptococcus phage Javan485, complete genome	9627-9659	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448851	Streptococcus phage Javan14, complete genome	12140-12172	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448833	Streptococcus phage Javan87, complete genome	9367-9399	1	0.97
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448673	Streptococcus phage Javan119, complete genome	9946-9978	1	0.97
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448862	Streptococcus phage Javan178, complete genome	8290-8324	1	0.971
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448681	Streptococcus phage Javan141, complete genome	8090-8124	1	0.971
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448672	Streptococcus phage Javan117, complete genome	8159-8193	1	0.971
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448849	Streptococcus phage Javan128, complete genome	8063-8097	1	0.971
NC_008024_1	1.8\|1317227\|35\|NC_008024\|PILER-CR	1317227-1317261	35	MK448850	Streptococcus phage Javan132, complete genome	12888-12922	1	0.971
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448964	Streptococcus phage Javan502, complete genome	6851-6883	2	0.939
NC_008024_1	1.4\|1317293\|33\|NC_008024\|CRISPRCasFinder,CRT	1317293-1317325	33	MK448955	Streptococcus phage Javan478, complete genome	13965-13997	2	0.939
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448964	Streptococcus phage Javan502, complete genome	6851-6883	2	0.939
NC_008024_1	1.9\|1317294\|33\|NC_008024\|PILER-CR	1317294-1317326	33	MK448955	Streptococcus phage Javan478, complete genome	13965-13997	2	0.939
NC_008024_1	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	MK448845	Streptococcus phage Javan118, complete genome	8661-8693	5	0.848
NC_008024_1	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	MK448845	Streptococcus phage Javan118, complete genome	8661-8693	5	0.848

1. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

2. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

3. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

4. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

5. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

6. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

7. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

8. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

9. spacer 1.2|1317160|34|NC_008024|CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

10. spacer 1.2|1317160|34|NC_008024|CRISPRCasFinder,CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

11. spacer 1.2|1317160|34|NC_008024|CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

12. spacer 1.2|1317160|34|NC_008024|CRISPRCasFinder,CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

13. spacer 1.2|1317160|34|NC_008024|CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

14. spacer 1.2|1317160|34|NC_008024|CRISPRCasFinder,CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

15. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

16. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

17. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

18. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

19. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

20. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

21. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

22. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

23. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

24. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

25. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

26. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

27. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

28. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

29. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagaagctcatgaa	Protospacer
*********************************

30. spacer 1.7|1317161|34|NC_008024|PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

31. spacer 1.7|1317161|34|NC_008024|PILER-CR matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

32. spacer 1.7|1317161|34|NC_008024|PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

33. spacer 1.7|1317161|34|NC_008024|PILER-CR matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

34. spacer 1.7|1317161|34|NC_008024|PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

35. spacer 1.7|1317161|34|NC_008024|PILER-CR matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 0, identity: 1.0

tatgtgggtgtattggctagtcatgtaattattt	CRISPR spacer
tatgtgggtgtattggctagtcatgtaattattt	Protospacer
**********************************

36. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

37. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

38. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

39. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

40. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

41. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

42. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 0, identity: 1.0

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggtatcatcttag	Protospacer
***********************************

43. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

44. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

45. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

46. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

47. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

48. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

49. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

50. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

51. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

52. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

53. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

54. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

55. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

56. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

57. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

58. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

59. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

60. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggcattgtaactggtatcatcttag	Protospacer
************.**********************

61. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggcatcatcttag	Protospacer
************************.**********

62. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggcatcatcttag	Protospacer
************************.**********

63. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgttactggtatcatcttag	Protospacer
****************** ****************

64. spacer 1.3|1317226|35|NC_008024|CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggcatcatcttag	Protospacer
************************.**********

65. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

66. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

67. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

68. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

69. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

70. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK449012 (Streptococcus phage Javan94, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

71. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

72. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

73. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

74. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

75. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

76. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

77. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

78. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

79. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

80. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaaaaagctcatgaa	Protospacer
*********************.***********

81. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 1, identity: 0.97

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagctcatgaa	Protospacer
********************** **********

82. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggcattgtaactggtatcatcttag	Protospacer
************.**********************

83. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggcatcatcttag	Protospacer
************************.**********

84. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggcatcatcttag	Protospacer
************************.**********

85. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgttactggtatcatcttag	Protospacer
****************** ****************

86. spacer 1.8|1317227|35|NC_008024|PILER-CR matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 1, identity: 0.971

gcttaaaatcggtattgtaactggtatcatcttag	CRISPR spacer
gcttaaaatcggtattgtaactggcatcatcttag	Protospacer
************************.**********

87. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 2, identity: 0.939

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagggtaaaaaagctcatgaa	Protospacer
***************.*****.***********

88. spacer 1.4|1317293|33|NC_008024|CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 2, identity: 0.939

tgactctattattgattgaggaggtgacgaaat	CRISPR spacer
tgactctattatttattgaggagttgacgaaat	Protospacer
************* ********* *********

89. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 2, identity: 0.939

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagggtaaaaaagctcatgaa	Protospacer
***************.*****.***********

90. spacer 1.9|1317294|33|NC_008024|PILER-CR matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 2, identity: 0.939

tgactctattattgattgaggaggtgacgaaat	CRISPR spacer
tgactctattatttattgaggagttgacgaaat	Protospacer
************* ********* *********

91. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 5, identity: 0.848

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagcttattcc	Protospacer
********************** ****.**

92. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 5, identity: 0.848

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagagtaaagcagcttattcc	Protospacer
********************** ****.**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

352078 : 397686

Mycobacterium_phage(15.38%)

tRNA,bacteriocin,protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011528307.1\|352078_354079_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	3.5e-87	35.3
WP_011528309.1\|354573_355587_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	1.9e-97	53.7
WP_011528310.1\|355590_356025_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	1.2e-11	37.5
WP_011528311.1\|356044_358225_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.6e-170	43.1
WP_021299376.1\|358430_359183_-	ADP-ribosyltransferase	NA	NA	NA	NA
WP_044555125.1\|359641_360136_+	hypothetical protein	NA	NA	NA	NA
WP_136278216.1\|360445_360811_+	hypothetical protein	NA	NA	NA	NA
WP_011017435.1\|361043_361295_+	hypothetical protein	NA	NA	NA	NA
WP_011528316.1\|361388_362096_-	hypothetical protein	NA	NA	NA	NA
WP_002990844.1\|364276_364513_+	DUF2829 domain-containing protein	NA	NA	NA	NA
WP_011528320.1\|364505_365204_+	3-oxoacyl-ACP reductase	A0A0N9R355	Chrysochromulina_ericina_virus	2.3e-09	24.4
WP_044555074.1\|365279_366239_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002985796.1\|366571_367909_+	MFS transporter	NA	NA	NA	NA
WP_011528322.1\|368081_369464_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L4K9	Tupanvirus	1.3e-32	36.4
WP_002990829.1\|369494_370049_+	NUDIX hydrolase	NA	NA	NA	NA
WP_002990826.1\|370048_370300_+	hypothetical protein	NA	NA	NA	NA
WP_011528323.1\|370319_371015_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_011528324.1\|371165_371507_+	hypothetical protein	NA	NA	NA	NA
WP_011528325.1\|371603_372251_-	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_004218965.1\|372396_373329_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021299377.1\|373392_374118_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.1e-17	32.6
WP_011528326.1\|374118_374973_+	metal ABC transporter permease	NA	NA	NA	NA
WP_002990808.1\|375120_375927_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.5e-20	36.6
WP_011528327.1\|376143_378549_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	3.8e-88	51.7
WP_011528328.1\|378618_378972_-	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_002990800.1\|379215_379641_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_002985768.1\|379746_380436_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_002985765.1\|380757_381486_+	UMP kinase	NA	NA	NA	NA
WP_002985763.1\|381514_382072_+	ribosome recycling factor	NA	NA	NA	NA
WP_011528329.1\|382180_383038_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_079891229.1\|383103_383619_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002985757.1\|383615_383831_+	YozE family protein	NA	NA	NA	NA
WP_011528331.1\|383986_385168_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	5.6e-16	40.5
WP_042769843.1\|385483_387256_+	oleate hydratase	NA	NA	NA	NA
WP_010921967.1\|387414_388467_+	PhoH family protein	W8D063	Erwinia_phage	1.2e-46	50.0
WP_009880369.1\|388512_389088_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_002985748.1\|389246_389744_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_002985746.1\|389724_390132_+	diacylglycerol kinase	NA	NA	NA	NA
WP_003047080.1\|390251_391148_+	GTPase Era	NA	NA	NA	NA
WP_014635332.1\|391167_391644_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_011528335.1\|392804_393251_-	ATP-binding cassette domain-containing protein	F2Y302	Organic_Lake_phycodnavirus	2.0e-11	35.1
WP_011528336.1\|393473_394184_-\|bacteriocin	bacteriocin ABC transporter	NA	NA	NA	NA
WP_002994577.1\|394288_394525_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_002994580.1\|394822_395047_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_002994581.1\|395024_395201_+	hypothetical protein	NA	NA	NA	NA
WP_157261042.1\|395557_395806_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_042769846.1\|396416_396644_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_021299375.1\|396692_397010_+	hypothetical protein	NA	NA	NA	NA
WP_011528340.1\|397075_397357_+\|transposase	transposase	NA	NA	NA	NA
WP_011528341.1\|397389_397686_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	6.5e-06	42.0

DBSCAN-SWA_2

531277 : 588618

Streptococcus_phage(60.32%)

terminase,capsid,tRNA,head,holin,tail,portal,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042769882.1\|531277_532402_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_096466706.1\|532470_533568_+	peptide chain release factor 2	NA	NA	NA	NA
WP_002985455.1\|533587_534280_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	1.0e-30	35.6
WP_002990498.1\|534272_535202_+	ABC transporter permease	NA	NA	NA	NA
WP_002985449.1\|535511_536147_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	7.2e-79	62.9
WP_012560563.1\|536378_537143_+	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA
WP_011528429.1\|537250_539752_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	3.0e-205	48.4
WP_011528430.1\|540087_541281_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_011528431.1\|541301_542648_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.4e-55	30.8
WP_002985434.1\|543061_543952_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	8.8e-06	29.8
WP_011017561.1\|543948_544926_+	YvcK family protein	A1IMD5	Streptococcus_phage	1.2e-138	74.2
WP_002990485.1\|544922_545834_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.9e-105	64.4
WP_011017563.1\|546030_547446_-	recombinase family protein	A5GZ62	Lactococcus_phage	1.4e-109	47.2
WP_021299479.1\|547596_548139_-	PH domain-containing protein	Q4ZA70	Staphylococcus_virus	3.9e-33	41.9
WP_011527535.1\|548164_548914_-	helix-turn-helix domain-containing protein	A0A097PBE5	Streptococcus_pyogenes_phage	4.5e-80	63.8
WP_002985414.1\|549300_549459_+	hypothetical protein	J7KH24	Streptococcus_phage	7.1e-20	88.5
WP_001008979.1\|549557_550199_-	hypothetical protein	J7KJ31	Streptococcus_phage	1.5e-116	100.0
WP_001157159.1\|550291_550498_+	helix-turn-helix domain-containing protein	A0A1X9I5S3	Streptococcus_phage	1.1e-17	64.7
WP_002984292.1\|550743_550953_-	hypothetical protein	NA	NA	NA	NA
WP_011527536.1\|551115_551346_-	hypothetical protein	NA	NA	NA	NA
WP_008087494.1\|551490_551676_+	helix-turn-helix transcriptional regulator	J7KH19	Streptococcus_phage	3.5e-18	68.9
WP_011527538.1\|551748_551994_+	hypothetical protein	NA	NA	NA	NA
WP_011527539.1\|551990_552131_+	hypothetical protein	A0A1P8VVR9	Streptococcus_phage	4.2e-16	91.1
WP_011527540.1\|552140_552353_+	hypothetical protein	NA	NA	NA	NA
WP_008087492.1\|552340_552523_+	hypothetical protein	A0A2P0ZLA4	Lactobacillus_phage	4.0e-06	43.8
WP_011527541.1\|552632_552944_+	hypothetical protein	A0A1S5PRW6	Streptococcus_phage	8.0e-23	48.5
WP_011527542.1\|552930_553623_+	AAA family ATPase	J7KC09	Streptococcus_phage	5.9e-127	96.1
WP_011527543.1\|553718_554954_+	DEAD/DEAH box helicase	J7KK96	Streptococcus_phage	3.3e-229	95.4
WP_011527544.1\|554969_555428_+	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	2.2e-77	94.1
WP_011527545.1\|555430_556243_+	bifunctional DNA primase/polymerase	J7KH42	Streptococcus_phage	1.9e-153	97.4
WP_011527546.1\|556232_557708_+	DNA primase family protein	A0A1P8VVM0	Streptococcus_phage	2.4e-242	84.2
WP_011527547.1\|557969_558383_+	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	1.6e-15	51.1
WP_011527548.1\|558379_558700_+	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	1.9e-51	95.3
WP_011527549.1\|558683_559040_+	hypothetical protein	A0A1P8VVP9	Streptococcus_phage	7.7e-54	87.3
WP_011527550.1\|559164_559446_+	DUF1599 domain-containing protein	J7KDH9	Streptococcus_phage	2.5e-31	75.0
WP_011527551.1\|559438_559624_+	hypothetical protein	A3F626	Streptococcus_phage	1.7e-12	94.7
WP_002987593.1\|559620_559890_+	hypothetical protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
WP_011017569.1\|559899_560313_+	hypothetical protein	Q938M1	Temperate_phage	6.4e-36	65.2
WP_011017570.1\|560309_560594_+	hypothetical protein	A3F628	Streptococcus_phage	4.6e-33	79.8
WP_011017571.1\|560597_561080_+	class I SAM-dependent methyltransferase	A0A097PAU8	Streptococcus_pyogenes_phage	9.6e-92	98.8
WP_021299463.1\|561069_561834_+	site-specific DNA-methyltransferase	A0A1S5SE41	Streptococcus_phage	4.2e-134	92.3
WP_011017573.1\|561881_562607_+	DUF1642 domain-containing protein	Q938L9	Temperate_phage	3.1e-25	44.8
WP_002987493.1\|562603_562774_+	hypothetical protein	A0A097PAS8	Streptococcus_pyogenes_phage	2.9e-27	100.0
WP_011017574.1\|563049_563487_+	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	6.7e-76	97.9
WP_019418843.1\|564069_565035_+	DNA adenine methylase	A0A126HDT5	Lactococcus_phage	4.7e-98	60.6
WP_002987543.1\|565161_565539_-	type II toxin-antitoxin system HicB family antitoxin	I3NLB2	Bifidobacterium_phage	3.3e-15	44.0
WP_001132273.1\|565590_565776_-	type II toxin-antitoxin system HicA family toxin	D6PSW1	Lactobacillus_phage	1.7e-09	54.0
WP_002985375.1\|566011_566350_+	HNH endonuclease	J7KH36	Streptococcus_phage	3.0e-55	90.7
WP_002985371.1\|566520_566988_+\|terminase	phage terminase small subunit P27 family	J7KC46	Streptococcus_phage	3.9e-82	98.7
WP_002985368.1\|566990_567221_+	hypothetical protein	NA	NA	NA	NA
WP_024623442.1\|567224_568979_+	amino acid transporter	J7KKD1	Streptococcus_phage	0.0e+00	96.1
WP_002985365.1\|568975_569146_+	hypothetical protein	J7KK43	Streptococcus_phage	2.3e-08	62.5
WP_002985363.1\|569138_569363_+	hypothetical protein	Q938K9	Temperate_phage	3.6e-17	61.4
WP_011017578.1\|569396_570617_+\|portal	phage portal protein	J7KDU3	Streptococcus_phage	6.9e-187	81.9
WP_011017579.1\|570594_571260_+\|protease	Clp protease ClpP	M1Q115	Streptococcus_phage	3.5e-92	78.1
WP_011017580.1\|571284_572472_+\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	1.3e-158	74.7
WP_011017581.1\|572616_572919_+\|head,tail	phage head-tail connector protein	J7KC36	Streptococcus_phage	1.3e-41	88.8
WP_011017582.1\|572915_573263_+\|head	phage head closure protein	J7KJ42	Streptococcus_phage	2.9e-50	88.2
WP_011527557.1\|573259_573637_+	HK97 gp10 family phage protein	J7KDM3	Streptococcus_phage	1.8e-45	72.8
WP_011017584.1\|573633_574059_+	hypothetical protein	J7KBZ9	Streptococcus_phage	7.2e-67	84.4
WP_011017585.1\|574074_574683_+	hypothetical protein	J7KKC8	Streptococcus_phage	6.7e-74	71.9
WP_011017586.1\|574735_575062_+	hypothetical protein	J7KK85	Streptococcus_phage	8.3e-39	75.0
WP_021299462.1\|575109_575259_+	hypothetical protein	J7KBS0	Streptococcus_phage	1.7e-15	85.7
WP_011527558.1\|575271_579195_+\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	1.9e-238	48.5
WP_011527559.1\|579194_579902_+\|tail	phage tail family protein	Q938K2	Temperate_phage	6.8e-94	71.9
WP_011527560.1\|579898_582043_+\|tail	phage tail protein	Q938K1	Temperate_phage	0.0e+00	94.7
WP_011017589.1\|582039_583050_+	hyaluronoglucosaminidase	Q938K0	Temperate_phage	7.8e-136	75.8
WP_011527561.1\|583062_584949_+	gp58-like family protein	Q938J9	Temperate_phage	3.1e-218	84.7
WP_002983467.1\|584960_585392_+	DUF1617 family protein	Q938J8	Temperate_phage	1.3e-63	89.5
WP_011017592.1\|585394_586012_+	DUF1366 domain-containing protein	Q938J7	Temperate_phage	5.0e-77	89.3
WP_000609113.1\|586294_586522_+\|holin	phage holin	A7J2B3	Streptococcus_phage	5.8e-31	98.7
WP_002985329.1\|586637_587843_+	glucosaminidase domain-containing protein	Q938J4	Temperate_phage	1.6e-204	83.3
WP_011528435.1\|587910_588618_-	streptococcal pyrogenic exotoxin SpeC	A0A097PAT7	Streptococcus_pyogenes_phage	3.9e-09	27.1

DBSCAN-SWA_3

684323 : 694906

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011054348.1\|684323_686534_-	LTA synthase family protein	W6LM83	Streptococcus_phage	2.9e-268	69.1
WP_002985142.1\|686641_687805_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	3.4e-143	65.1
WP_002985140.1\|687801_688488_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	7.0e-88	68.9
WP_002990262.1\|688581_689748_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-34	32.8
WP_011528484.1\|689808_690150_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	5.9e-19	41.1
WP_011284677.1\|690371_691724_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-29	24.7
WP_021299160.1\|691811_693080_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_021299165.1\|693109_693550_-	hypothetical protein	NA	NA	NA	NA
WP_011528487.1\|693784_694906_+	cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	5.3e-24	27.4

DBSCAN-SWA_4

789748 : 841762

Streptococcus_pyogenes_phage(48.21%)

integrase,terminase,capsid,tRNA,holin,tail,portal

attL 804055:804100|attR 841930:841975

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011528534.1\|789748_790648_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_010922191.1\|790720_791959_+	GTPase HflX	NA	NA	NA	NA
WP_002990114.1\|791951_792587_+	cystathionine beta-lyase	NA	NA	NA	NA
WP_009881223.1\|792601_793531_+	ribonuclease Z	NA	NA	NA	NA
WP_002984893.1\|793530_794295_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_011528535.1\|794291_796502_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.5e-70	30.0
WP_002990109.1\|796652_797171_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.9e-30	42.4
WP_011184446.1\|797251_797935_+	DnaD domain-containing protein	Q938N2	Temperate_phage	2.2e-09	36.8
WP_002990106.1\|797931_798588_+	endonuclease III	NA	NA	NA	NA
WP_002990104.1\|798659_799346_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_021299315.1\|799335_800124_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_011528537.1\|800163_801270_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_002992970.1\|801327_802197_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	2.4e-101	64.6
WP_002990099.1\|802196_802790_+	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	3.7e-08	28.2
WP_002984881.1\|803033_804074_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.1e-68	43.9
804055:804100	attL	NA	NA	NA	NA
WP_011528538.1\|804156_805296_-\|integrase	site-specific integrase	A1EAB7	Streptococcus_phage	4.4e-119	55.8
WP_011528539.1\|805417_806104_-	hypothetical protein	A0A1P8VVT3	Streptococcus_phage	5.7e-122	100.0
WP_011054825.1\|806274_806427_-	hypothetical protein	A0A1P8VVQ0	Streptococcus_phage	5.2e-20	100.0
WP_011054824.1\|806437_806815_-	ImmA/IrrE family metallo-endopeptidase	A0A1P8VVK5	Streptococcus_phage	4.0e-69	100.0
WP_011528540.1\|806798_807158_-	helix-turn-helix transcriptional regulator	A0A1P8VVN3	Streptococcus_phage	1.8e-58	98.3
WP_009881062.1\|807346_807565_+	helix-turn-helix transcriptional regulator	A0A1P8VVR5	Streptococcus_phage	4.1e-34	100.0
WP_011528542.1\|807659_807911_+	hypothetical protein	A0A1P8VVV6	Streptococcus_phage	2.8e-42	100.0
WP_011528544.1\|808091_808406_+	helix-turn-helix transcriptional regulator	A0A1P8VVN6	Streptococcus_phage	1.7e-52	100.0
WP_011528545.1\|808632_809115_+	siphovirus Gp157 family protein	A0A1P8VVS5	Streptococcus_phage	1.2e-78	100.0
WP_002995975.1\|809115_809796_+	AAA family ATPase	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
WP_011528546.1\|809897_811127_+	DEAD/DEAH box helicase	A0A1P8VVM2	Streptococcus_phage	3.3e-237	100.0
WP_002995969.1\|811142_811601_+	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	3.8e-82	100.0
WP_011528547.1\|811603_812416_+	bifunctional DNA primase/polymerase	A0A1P8VVM6	Streptococcus_phage	7.2e-156	99.3
WP_002995960.1\|814130_814451_+	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	2.0e-53	100.0
WP_011018138.1\|814434_814791_+	hypothetical protein	A0A1P8VVP9	Streptococcus_phage	5.0e-61	100.0
WP_011017568.1\|815032_815317_+	DUF3310 domain-containing protein	A0A1P8VVP5	Streptococcus_phage	7.0e-50	100.0
WP_002987593.1\|815313_815583_+	hypothetical protein	A0A1P8VVR6	Streptococcus_phage	3.1e-47	100.0
WP_011054753.1\|815592_815997_+	hypothetical protein	Q938M1	Temperate_phage	6.0e-71	100.0
WP_011054752.1\|815993_816164_+	hypothetical protein	Q938M0	Temperate_phage	4.2e-26	100.0
WP_011054751.1\|816160_816667_+	DUF1642 domain-containing protein	Q938L9	Temperate_phage	9.8e-95	100.0
WP_164997036.1\|816663_816834_+	hypothetical protein	A0A097PAS8	Streptococcus_pyogenes_phage	1.1e-26	98.2
WP_011017866.1\|817107_817548_+	ArpU family transcriptional regulator	Q938L8	Temperate_phage	5.0e-79	100.0
WP_011528550.1\|817911_818130_-	hypothetical protein	NA	NA	NA	NA
WP_011285571.1\|818216_818597_+	hypothetical protein	A0A097PAR5	Streptococcus_pyogenes_phage	1.0e-64	100.0
WP_021299302.1\|818586_819861_+\|terminase	PBSX family phage terminase large subunit	A0A097PAV9	Streptococcus_pyogenes_phage	1.9e-251	99.8
WP_011528552.1\|819860_821186_+\|portal	phage portal protein	A0A097PAT2	Streptococcus_pyogenes_phage	6.3e-234	95.6
WP_011528553.1\|821154_822063_+\|capsid	minor capsid protein	A0A097PBF2	Streptococcus_pyogenes_phage	2.4e-83	94.5
WP_011528554.1\|822069_822300_+	hypothetical protein	Q938K9	Temperate_phage	4.0e-19	62.5
WP_021299309.1\|822411_822981_+	DUF4355 domain-containing protein	A0A097PAW3	Streptococcus_pyogenes_phage	1.4e-60	90.5
WP_011528556.1\|822999_823890_+	hypothetical protein	A0A097PAW2	Streptococcus_pyogenes_phage	8.6e-86	99.4
WP_011528557.1\|823901_824195_+	Rho termination factor N-terminal domain-containing protein	A0A097PBF3	Streptococcus_pyogenes_phage	1.3e-46	99.0
WP_011528558.1\|824208_824553_+	hypothetical protein	A0A097PAS2	Streptococcus_pyogenes_phage	1.5e-54	99.1
WP_011528559.1\|824549_824861_+	hypothetical protein	A0A097PAW7	Streptococcus_pyogenes_phage	4.6e-47	94.2
WP_011528560.1\|824857_825253_+	hypothetical protein	A0A097PAT9	Streptococcus_pyogenes_phage	1.8e-56	93.0
WP_011528561.1\|825254_825665_+	DUF5072 family protein	A0A097PAW5	Streptococcus_pyogenes_phage	1.8e-70	99.3
WP_079890482.1\|825676_826183_+\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	8.3e-78	98.7
WP_011528563.1\|826195_826513_+	hypothetical protein	A0A097PAS6	Streptococcus_pyogenes_phage	1.9e-51	98.1
WP_011528564.1\|826485_826944_+	hypothetical protein	A0A097PAX1	Streptococcus_pyogenes_phage	7.0e-76	93.4
WP_011528565.1\|826936_828742_+\|tail	tail protein	A0A097PAU2	Streptococcus_pyogenes_phage	9.1e-252	95.5
WP_011528566.1\|828742_830227_+\|tail	phage tail family protein	A0A097PAW9	Streptococcus_pyogenes_phage	1.8e-290	98.8
WP_011528567.1\|830227_833677_+\|tail	phage tail protein	A0A097PBF5	Streptococcus_pyogenes_phage	0.0e+00	98.9
WP_011528568.1\|833681_835544_+	hypothetical protein	A0A097PAT0	Streptococcus_pyogenes_phage	0.0e+00	99.8
WP_009880247.1\|835554_835902_+	DUF1366 domain-containing protein	A0A097PAX5	Streptococcus_pyogenes_phage	3.5e-59	100.0
WP_015055952.1\|836051_836375_+	hypothetical protein	A0A097PAX2	Streptococcus_pyogenes_phage	7.7e-53	100.0
WP_011054798.1\|836374_836707_+\|holin	phage holin	A0A097PBF6	Streptococcus_pyogenes_phage	5.7e-51	100.0
WP_011054797.1\|836708_837473_+	CHAP domain-containing protein	A0A097PAT3	Streptococcus_pyogenes_phage	1.5e-150	100.0
WP_011054796.1\|837484_838087_+	hypothetical protein	A0A097PAX9	Streptococcus_pyogenes_phage	7.8e-91	98.8
WP_011528569.1\|838097_838871_+	hypothetical protein	A0A097PAV0	Streptococcus_pyogenes_phage	4.6e-128	94.6
WP_009880241.1\|838880_839102_+	hypothetical protein	A0A097PAX7	Streptococcus_pyogenes_phage	2.5e-18	84.5
WP_011528570.1\|839101_839761_+	hypothetical protein	A0A097PBF7	Streptococcus_pyogenes_phage	6.3e-118	96.3
WP_011017966.1\|839829_840264_-	hypothetical protein	NA	NA	NA	NA
WP_011285611.1\|840535_841336_-	streptodornase Sda3	NA	NA	NA	NA
WP_011528571.1\|841573_841762_+	hypothetical protein	A3F673	Streptococcus_phage	6.1e-18	73.3
841930:841975	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1218454 : 1258863

Streptococcus_phage(68.75%)

integrase,terminase,capsid,holin,tail,portal

attL 1220659:1220678|attR 1256236:1256255

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011528775.1\|1218454_1220317_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	7.0e-90	33.8
1220659:1220678	attL	NA	NA	NA	NA
WP_011528776.1\|1220847_1221030_-	hypothetical protein	A3F673	Streptococcus_phage	5.3e-19	75.0
WP_002988472.1\|1221142_1221925_-	enterotoxin type C3 EntC3	A0A097PAT7	Streptococcus_pyogenes_phage	4.3e-49	45.8
WP_002988467.1\|1222172_1223297_-	Fic family protein	D7RWK9	Brochothrix_phage	3.1e-93	49.1
WP_011528778.1\|1223432_1224650_-	glucosaminidase domain-containing protein	A0A1P8VVM5	Streptococcus_phage	1.4e-163	60.1
WP_003058873.1\|1224768_1224996_-\|holin	phage holin	A7J2B3	Streptococcus_phage	2.0e-31	100.0
WP_011017397.1\|1224992_1225265_-	hypothetical protein	A7J2B2	Streptococcus_phage	5.5e-36	91.0
WP_011528779.1\|1225276_1225909_-	hypothetical protein	Q938J7	Temperate_phage	4.0e-45	50.5
WP_011528780.1\|1225911_1226340_-	DUF1617 family protein	Q938J8	Temperate_phage	3.7e-63	87.9
WP_011528781.1\|1226348_1228130_-	hypothetical protein	Q938J9	Temperate_phage	1.5e-65	40.2
WP_011528782.1\|1228144_1229260_-	hyaluronoglucosaminidase	A7J2A8	Streptococcus_phage	4.8e-110	66.6
WP_011528783.1\|1229256_1231233_-\|tail	phage tail protein	M1PKG3	Streptococcus_phage	1.4e-99	49.9
WP_002992579.1\|1231214_1231910_-	hypothetical protein	A0A1B1P761	Bacillus_phage	4.7e-07	32.2
WP_011528784.1\|1231906_1234264_-	hypothetical protein	M1NRG5	Streptococcus_phage	2.6e-134	50.3
WP_011528785.1\|1234263_1234635_-	DUF5361 domain-containing protein	M1PL84	Streptococcus_phage	1.2e-33	59.2
WP_003047548.1\|1234649_1234913_-	hypothetical protein	A0A0B5A2F3	Streptococcus_phage	1.7e-18	54.7
WP_014635577.1\|1234923_1235502_-	hypothetical protein	A0A1X9I5X2	Streptococcus_phage	2.9e-58	62.9
WP_011528787.1\|1235513_1235849_-	hypothetical protein	A0A1P8BMR5	Lactococcus_phage	1.7e-34	64.9
WP_000032787.1\|1235849_1236086_-	hypothetical protein	A0A1P8BMT2	Lactococcus_phage	2.5e-21	66.7
WP_011054681.1\|1236078_1236417_-	hypothetical protein	A0A0B5A086	Streptococcus_phage	8.1e-45	75.0
WP_011054682.1\|1236376_1236799_-	phage Gp19/Gp15/Gp42 family protein	A0A0B5A2F6	Streptococcus_phage	8.2e-47	67.2
WP_010922460.1\|1236808_1237009_-	hypothetical protein	NA	NA	NA	NA
WP_011528788.1\|1237008_1237920_-\|capsid	phage major capsid protein	M1PFL0	Streptococcus_phage	2.2e-113	67.0
WP_010922462.1\|1237944_1238406_-	DUF4355 domain-containing protein	M1Q1L0	Streptococcus_phage	4.5e-38	53.2
WP_021299324.1\|1238485_1239901_-\|terminase	phage terminase large subunit-like protein	A0A0B5A091	Streptococcus_phage	2.0e-214	74.6
WP_011054745.1\|1240220_1240487_-	hypothetical protein	Q938K9	Temperate_phage	1.5e-38	100.0
WP_002994100.1\|1240538_1240763_-	hypothetical protein	NA	NA	NA	NA
WP_010922467.1\|1240768_1242262_-	hypothetical protein	M1Q184	Streptococcus_phage	2.0e-87	55.0
WP_010922468.1\|1242254_1243523_-\|portal	phage portal protein	M1PFL4	Streptococcus_phage	2.2e-188	75.6
WP_002994106.1\|1243519_1243876_-	hypothetical protein	M1PRL3	Streptococcus_phage	2.4e-07	57.8
WP_011054690.1\|1244023_1244368_-	HNH endonuclease	M1Q0W7	Streptococcus_phage	3.2e-41	69.4
WP_011528791.1\|1244475_1244895_-	DUF1492 domain-containing protein	A0A1X9I5B5	Streptococcus_phage	6.7e-57	79.9
WP_011054692.1\|1244970_1245222_-	hypothetical protein	M1PF60	Streptococcus_phage	1.6e-18	59.0
WP_011054693.1\|1245218_1245374_-	hypothetical protein	NA	NA	NA	NA
WP_011054694.1\|1245370_1245688_-	DUF1372 family protein	A1EAD7	Streptococcus_phage	9.0e-30	71.4
WP_011528792.1\|1245723_1246236_-	hypothetical protein	M1PFM2	Streptococcus_phage	4.9e-78	85.3
WP_011184741.1\|1246232_1246565_-	hypothetical protein	M1NS23	Streptococcus_phage	8.8e-36	67.0
WP_011054697.1\|1246575_1247922_-	PcfJ domain-containing protein	A8ATM0	Listeria_phage	1.0e-122	49.4
WP_011054698.1\|1247918_1248314_-	hypothetical protein	A8ATL9	Listeria_phage	1.4e-19	52.3
WP_011528793.1\|1248678_1249476_-	PD-(D/E)XK nuclease-like domain-containing protein	J7KGZ1	Streptococcus_phage	2.1e-131	84.2
WP_000594115.1\|1249468_1249669_-	hypothetical protein	NA	NA	NA	NA
WP_011528796.1\|1250589_1250919_-	hypothetical protein	J7KGX3	Streptococcus_phage	7.1e-46	84.4
WP_002988357.1\|1250974_1251181_-	hypothetical protein	NA	NA	NA	NA
WP_002988354.1\|1251189_1251330_-	hypothetical protein	A0A1X9I6Y1	Streptococcus_phage	3.4e-05	54.5
WP_011017564.1\|1251541_1251928_-	DnaD domain-containing protein	Q938N2	Temperate_phage	8.1e-25	51.9
WP_010922477.1\|1252416_1252602_-	hypothetical protein	Q938N3	Temperate_phage	1.3e-20	83.6
WP_010922478.1\|1252603_1252915_-	excisionase	A0A1S5SA25	Streptococcus_phage	5.3e-43	77.7
WP_010922479.1\|1253184_1253397_-	helix-turn-helix transcriptional regulator	A0A1X9I583	Streptococcus_phage	1.1e-10	56.7
WP_010922480.1\|1253597_1254353_+	helix-turn-helix transcriptional regulator	A0A1S5S8S8	Streptococcus_phage	2.8e-77	60.8
WP_011528799.1\|1254364_1254883_+	HIRAN domain-containing protein	E8ZDN5	Streptococcus_phage	1.6e-31	45.9
WP_003051793.1\|1255006_1256149_+\|integrase	site-specific integrase	M1NRJ9	Streptococcus_phage	2.4e-173	77.4
WP_002983920.1\|1256237_1256513_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.6e-25	73.0
1256236:1256255	attR	NA	NA	NA	NA
WP_002989129.1\|1256611_1257199_-	YpmS family protein	NA	NA	NA	NA
WP_002992620.1\|1257176_1258019_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_002983913.1\|1258011_1258863_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	5.4e-13	35.7

DBSCAN-SWA_6

1859558 : 1882076

Streptococcus_phage(47.06%)

tRNA,integrase,holin

attL 1862757:1862777|attR 1876622:1876642

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011529098.1\|1859558_1860779_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	1.6e-05	23.3
WP_021299132.1\|1860789_1862772_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	2.3e-62	30.1
1862757:1862777	attL	NA	NA	NA	NA
WP_021299091.1\|1862866_1864012_-\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	2.7e-84	44.9
WP_011185066.1\|1864214_1864358_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_011529101.1\|1865255_1865903_-	helix-turn-helix transcriptional regulator	A0A2H4JGT9	uncultured_Caudovirales_phage	4.4e-15	28.1
WP_011529102.1\|1866068_1866266_+	helix-turn-helix transcriptional regulator	A0A1X9I5U5	Streptococcus_phage	3.7e-18	72.3
WP_021299093.1\|1866279_1866894_+	Bro-N domain-containing protein	A0A1W6JPC3	Staphylococcus_phage	1.1e-36	42.0
WP_021299105.1\|1866920_1867163_+	hypothetical protein	NA	NA	NA	NA
WP_011529105.1\|1867418_1867751_+	hypothetical protein	NA	NA	NA	NA
WP_011529106.1\|1867747_1867969_+	hypothetical protein	NA	NA	NA	NA
WP_011529107.1\|1867971_1868163_+	hypothetical protein	NA	NA	NA	NA
WP_000206026.1\|1868174_1868537_+	hypothetical protein	NA	NA	NA	NA
WP_011529108.1\|1868533_1868863_+	hypothetical protein	NA	NA	NA	NA
WP_011529109.1\|1868865_1869138_+	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	3.6e-19	60.0
WP_011529110.1\|1869138_1869999_+	primase alpha helix C-terminal domain-containing protein	A0A1X9I6L2	Streptococcus_phage	2.5e-119	72.0
WP_042769766.1\|1870073_1871513_+	DNA primase family protein	Q9AZI5	Lactococcus_phage	1.1e-69	38.0
WP_042769761.1\|1871789_1871963_+	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	3.3e-10	57.9
WP_011529113.1\|1871968_1872142_+	hypothetical protein	NA	NA	NA	NA
WP_011529114.1\|1872143_1872410_+	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	8.9e-15	46.2
WP_011529115.1\|1872416_1872575_+	DUF2292 domain-containing protein	NA	NA	NA	NA
WP_011529116.1\|1872675_1873278_+	hypothetical protein	NA	NA	NA	NA
WP_011529117.1\|1873261_1873597_+	hypothetical protein	NA	NA	NA	NA
WP_011529118.1\|1873731_1874139_+	hypothetical protein	A0A1X9I6S2	Streptococcus_phage	4.7e-07	30.8
WP_012560493.1\|1874244_1874658_+	DUF1492 domain-containing protein	A0A1S5S8W3	Streptococcus_phage	5.1e-09	30.8
WP_011529120.1\|1874732_1874933_+	hypothetical protein	S6C469	Thermus_phage	5.1e-07	43.9
WP_011285285.1\|1875168_1875552_+	ArpU family transcriptional regulator	Q938L8	Temperate_phage	3.7e-14	41.7
WP_011285286.1\|1875716_1876370_+	hypothetical protein	NA	NA	NA	NA
WP_011529121.1\|1876765_1879321_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	6.8e-43	23.3
1876622:1876642	attR	NA	NA	NA	NA
WP_002982171.1\|1879656_1880094_-	arginine repressor	NA	NA	NA	NA
WP_011529123.1\|1880384_1882076_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	1.1e-73	32.4

Anti-CRISPR protein detection

Acr_ID: NC_008024.1|WP_003047548.1|1234649_1234913_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_008024.1|WP_003047548.1|1234649_1234913_-|hypothetical-protein

1234649_1234913_-

87 aa aa

1218454-1258863

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_008024_1	TypeI	1.1\|1317095\|33\|NC_008024\|CRISPRCasFinder,CRT	1317095-1317127	33	1249299-1249267	2
NC_008024_1	TypeI	1.6\|1317096\|33\|NC_008024\|PILER-CR	1317096-1317128	33	1249299-1249267	2

1. spacer 1.1|1317095|33|NC_008024|CRISPRCasFinder,CRT matches to NC_008024 position: 1249299-1249267, mismatch: 2

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagggtaaaaaagctcatgaa	Protospacer
***************.*****.***********

2. spacer 1.6|1317096|33|NC_008024|PILER-CR matches to NC_008024 position: 1249299-1249267, mismatch: 2

cactcttactttgagagtaaagaagctcatgaa	CRISPR spacer
cactcttactttgagggtaaaaaagctcatgaa	Protospacer
***************.*****.***********

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_008024

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information