CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_007947	Methylobacillus flagellatus KT, complete genome	2 crisprs	csa3,DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DEDDh	1	21	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_007947_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007947_1

175783-175935

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCACATGCGGGGATGAACCGGC	PILER-CR
GTGTTCCCCGCACATGCGGGGATGAACCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_007947_1

>merge|NC_007947|1|175783-175935|PILER-CR,CRISPRCasFinder
GTGTTCCCCGCACATGCGGGGATGAACCGGCATAGAGCTAATAAGAGTAACGGCAATGTAAGTGTTCCCCGCACATGCGGGGATGAACCGGCTCATTGGGACCAGAGCGGCTTTATGGCGTGGTGTTCCCCGCACATGCGGGGATGAACCGCC

>NC_007947|1|1|175783-175935|PILER-CR
GTGTTCCCCGCACATGCGGGGATGAACCGGC	ATAGAGCTAATAAGAGTAACGGCAATGTAA
GTGTTCCCCGCACATGCGGGGATGAACCGGC	TCATTGGGACCAGAGCGGCTTTATGGCGTG
GTGTTCCCCGCACATGCGGGGATGAACCGCC

>NC_007947|1|1|175783-175933|CRISPRCasFinder
GTGTTCCCCGCACATGCGGGGATGAACCG	GCATAGAGCTAATAAGAGTAACGGCAATGTAA
GTGTTCCCCGCACATGCGGGGATGAACCG	GCTCATTGGGACCAGAGCGGCTTTATGGCGTG
GTGTTCCCCGCACATGCGGGGATGAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_007947.1\|WP_048811475.1\|183810_184539_+\|CerR-family-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|378136
NC_007947.1\|WP_011478530.1\|173954_174920_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|378820
NC_007947.1\|WP_011478526.1\|168845_171179_+\|N,N-dimethylformamidase	unknown	unknown	gnl\|CDD\|379155
NC_007947.1\|WP_011478534.1\|177213_178338_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NC_007947.1\|WP_011478541.1\|186596_187172_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NC_007947.1\|WP_011478535.1\|178377_181143_-\|ribosome-associated-ATPase/putative-transporter-RbbA	unknown	unknown	gnl\|CDD\|224054
NC_007947.1\|WP_011478539.1\|184556_185549_+\|DUF4105-domain-containing-protein	unknown	unknown	gnl\|CDD\|379156
NC_007947.1\|WP_011478521.1\|163538_164255_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223488
NC_007947.1\|WP_011478523.1\|165032_165920_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324
NC_007947.1\|WP_011478542.1\|187293_187701_+\|hypothetical-protein	unknown	unknown	unknown
NC_007947.1\|WP_048811473.1\|171546_172617_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|99777
NC_007947.1\|WP_011478522.1\|164302_165028_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213191
NC_007947.1\|WP_011478524.1\|165922_167560_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
NC_007947.1\|WP_011478537.1\|182224_183706_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|182103
NC_007947.1\|WP_011478536.1\|181139_182210_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NC_007947.1\|WP_011478540.1\|185680_186448_+\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197320
NC_007947.1\|WP_011478533.1\|176154_177165_+\|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF	unknown	unknown	gnl\|CDD\|236964
NC_007947.1\|WP_011478529.1\|173299_173791_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367797
NC_007947.1\|WP_048811474.1\|172701_173238_+\|YaeQ-family-protein	unknown	unknown	gnl\|CDD\|377782
NC_007947.1\|WP_011478525.1\|167613_168762_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_007947.1\|WP_048811475.1\|183810_184539_+\|CerR-family-C-terminal-domain-containing-protein	gnl\|CDD\|378136	pfam09209, DUF1956, Domain of unknown function (DUF1956). Members of this family are found in various prokaryotic transcriptional regulator proteins. Their exact function has not, as yet, been identified.	2.70158e-25
NC_007947.1\|WP_011478530.1\|173954_174920_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	6.56973e-11
NC_007947.1\|WP_011478526.1\|168845_171179_+\|N,N-dimethylformamidase	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	0.00074663
NC_007947.1\|WP_011478534.1\|177213_178338_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	9.13653e-25
NC_007947.1\|WP_011478541.1\|186596_187172_+\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	1.11454e-41
NC_007947.1\|WP_011478535.1\|178377_181143_-\|ribosome-associated-ATPase/putative-transporter-RbbA	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.15512e-88
NC_007947.1\|WP_011478539.1\|184556_185549_+\|DUF4105-domain-containing-protein	gnl\|CDD\|379156	pfam13387, DUF4105, Domain of unknown function (DUF4105). This is a family of uncharacterized bacterial proteins. There is a highly conserved histidine residue and a well-conserved NCT motif.	3.88313e-47
NC_007947.1\|WP_011478521.1\|163538_164255_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223488	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	9.78767e-72
NC_007947.1\|WP_011478523.1\|165032_165920_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	8.26584e-52
NC_007947.1\|WP_048811473.1\|171546_172617_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	1.20363e-10
NC_007947.1\|WP_011478522.1\|164302_165028_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213191	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter. LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.	2.23921e-61
NC_007947.1\|WP_011478524.1\|165922_167560_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	1.16988e-61
NC_007947.1\|WP_011478537.1\|182224_183706_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|182103	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein.	9.50342e-114
NC_007947.1\|WP_011478536.1\|181139_182210_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	9.07003e-42
NC_007947.1\|WP_011478540.1\|185680_186448_+\|exodeoxyribonuclease-III	gnl\|CDD\|197320	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Escherichia coli ExoIII, Neisseria meningitides NExo,and related proteins. These are ExoIII family AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiencies. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity. For example, Neisseria meningitides Nape and NExo, and exonuclease III (ExoIII) and endonuclease IV (EndoIV) in Escherichia coli. NExo and ExoIII are found in this subfamily. NExo is the non-dominant AP endonuclease. It exhibits strong 3'-5' exonuclease and 3'-deoxyribose phosphodiesterase activities. Escherichia coli ExoIII is an active AP endonuclease, and in addition, it exhibits double strand (ds)-specific 3'-5' exonuclease, exonucleolytic RNase H, 3'-phosphomonoesterase and 3'-phosphodiesterase activities, all catalyzed by a single active site. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes ExoIII and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	3.07503e-147
NC_007947.1\|WP_011478533.1\|176154_177165_+\|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF	gnl\|CDD\|236964	PRK11727, PRK11727, 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF.	0
NC_007947.1\|WP_011478529.1\|173299_173791_-\|hypothetical-protein	gnl\|CDD\|367797	pfam04073, tRNA_edit, Aminoacyl-tRNA editing domain. This domain is found either on its own or in association with the tRNA synthetase class II core domain (pfam00587). It is involved in the tRNA editing of mis-charged tRNAs including Cys-tRNA(Pro), Cys-tRNA(Cys), Ala-tRNA(Pro). The structure of this domain shows a novel fold.	2.61801e-33
NC_007947.1\|WP_048811474.1\|172701_173238_+\|YaeQ-family-protein	gnl\|CDD\|377782	pfam07152, YaeQ, YaeQ protein. This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialized transcription elongation protein. YaeQ is known to compensate for loss of RfaH function.	1.46178e-105

>NC_007947.1|WP_011478530.1|173954_174920_+|alpha/beta-fold-hydrolase
MRAYIGSFFIAICLMLCMSGRAYSALEESIVQLQTANGVLEGTLLVPEASRGMPVVLLVAGSGPTDRNGNQPGLHHNALLQLSGALAQYGIASLRYDKRGVGQSMGAAPREEDLRFEQYAADVRDWVKWLARDKRFGKITVIGHSEGSLLGMLAARQAKVANFISIAGPGRPADQLLQMQLASQPAEIQAMALPVLERLKQGKTVSPVNPALQALFRPSVQPYLISWFKYDPAKEIAKLKMPILIVQGTADIQVGEEDARLLGFANQDAAVVLIDGMNHILKQSVPDRAQNWNTYTQPELPVMPELTAVLARFIRQDGKLD
>NC_007947.1|WP_011478529.1|173299_173791_-|hypothetical-protein
MTSLASPVTDLLNAHSIPFTVIEIPLSEDKKPVRNLEELLESQGLDPKSVVRSVLFRTGSDQFILLAVAGGGRADWAILRNHLNERKLRMAEYDEVPEATGYVVGAVPPVALPEGLKVLVDNSVKDYETVVIGSGVLGYALALKGTDLLKLLGDAEQGSFAKV
>NC_007947.1|WP_048811474.1|172701_173238_+|YaeQ-family-protein
MALKSTVFKVTLQVADMDRHYYQDHALTLARHPSETDERMMVRLLAFALQAHELLAFGQGMTEDEEADLWRKDLTGKIEQWIDVGLPDEKLVRKACGRADEVLVYAYGGRTAEMWFEQNRNAFARLRNLGVFNLPQAQTKALAALAQRTMTLQCTIQDGQTWLSDGARSVEVSCDRVK
>NC_007947.1|WP_048811473.1|171546_172617_+|helix-turn-helix-transcriptional-regulator
MTSTVEAFSNVLLKLHDIAEYAPIDRYQELALDTVQEILPFDTAWWGIMSPNEISFSLHGSHLHNLPNSFVPMWEELKYDDALAKAVEVKPAQTVYFDQPAFDDAPGLATLMGEHAVKQAFCTSHYLPSENAFVFLSLYREQGSPRFTVREGLLNKFLMPHLCALWESNRMRYSEQYKDRLQDESIYLAIVDRQFQIFDADNTFFDILRQEWPKLNSLTLPQAMIAQMSRETRIAEIKFSKIIARYEFIGDFCILAIRQRQRIDLLTKRELMVAQAFSTGASYKDIAKSANLSPTTIRYYLRVIYDKLNVNNKAEMATVLRNTSLSESQKTWMQSYRVIQRVSGRASGPIFSLPGK
>NC_007947.1|WP_011478526.1|168845_171179_+|N,N-dimethylformamidase
MSQIKIFGYTDKISVKPGDEIGFHVSVDGTKKVTAQLVRLIHGDAYPDGPGFIEQEVPCPVNGEWDVQKQFTQVGSFLRVADPGNKLAHDGSFTLYAYIWPTLPTIGLRQALLGRWDCYHNQGYCLGINKQGVLEFWLGDGKEVDYVAAEVPLIAKMWYFVAVSYDASTGKATLYQESVANRYNSLLGKVVPMDYRSHVMEVMRFRARNIPEVPFLIAGSQDWHELRGHFVNQTYCGKIDRPGMYGRALSRAELDELKSGKPPSTEGLLAHWDTTAGYTDNGIGDTVVDVSGNGLHAHGYNRPVRGQTGWNWSGRNDSFRLAPQEYGGVEFHADAMIDCNWKQTKTMRIPEDLRSGVYAIRLRADNSKQNTQGLDEEYVVFFVRAKQPKSTLALLIPTGSYLAYANEHLSFDAQIVQPMSGRPPIISAVDVEMYQNPEFGFSTYDSYMDGAGVCFSSYHRPIINMRPKFRMSGFGSTWQFPADLSIVGWLEHMQYDYEVITEEDVHREGLSAMAPYRCIISGTHPEYISERILDAHEDFIEQGGRFIYMGGNGYYWNVAYRDDEPWVMEVRKLDSGMRAWAARPGEHYLQTTGQKSGIWKNLGRPPQKLLGVGFIGEGFESGRPFRRMPDSYHRTVSWITEGIEGEILGDFGLAHGGAAGVEVDRYDLSLGTPPHAKIIASSGGHTDNYVLSTEELLYAYPGTGGTQDYRVRADIVYFTAPNHGGVFSTGSIAFGQALPAYNFDNNISKLLSNVVNAFIKPGALPGGLWISQEKQWR
>NC_007947.1|WP_011478525.1|167613_168762_+|hypothetical-protein
MKNRLGSNILPSVMLACSMGFASTAQAGGTINFGEDKWISLGFGIRTTFTSTEDAAPNASSRSKDFELDIARIYLSGSLNQYIKGTVTLDKIGDDDFRVIDAYGQLEFMPEFNIWVGLLLPPSDRVNMNGHFFMNGWSFPGVVSQYQNKQTGRDNGILFWGKVLDKRLVYSAGIYEGNQASSFAGNNILDPNRSDNLMYAGRLQYDFWEANLDPGFYTSSAYFGKDVLSLGFSGRYQKDAVGSVIARDDYLGYNVDFLLEKVLPGGVLDIEAAAYRYDFDNDAVLAGMDINGVSRVQAGKAYLGVLSWMFPQTVGWGRFQPYTRYQKFAADGNASLDVREYDIGLNYIIDGHNARISGVYTKNKTENQDSYDKFVVGLQLQF
>NC_007947.1|WP_011478524.1|165922_167560_+|branched-chain-amino-acid-ABC-transporter-permease
MANLWKNPVANWSIKGEADNVPTIPWTSPLKPWIETTKAKQKLYKVGRLRYYYKFPGHGARTWHRWRYPFTRRRILNIRGEYNAKSLRREKTILDRRPVYWMLSFIAMVIAPLLMPGGLESTLLNAGAVFFIYAAINLCWTLVIGTAGIFSLASMAIVGAGAYGAAYLSLTYGLPWWSLPMVGSVIGLVFGILIALPATRLEGFYYALLTLGLVELCRVYVIQSRTFGSATGGVYGADSYLPDGISEISGLTISYYVCFAVMLAVLFMFRFIQGKRLGRILRMAPEKREAFAEATGVNFRWARIQVFIITSVVLGALGGVYASHFHGASPSLFSMDSVLLGLAMLVIGGIGRSEGAVFGTLVVVMIDKVFIDWGPLRLILIGVIMLSVVLFLKGGVFGIKQQFRAWRNKKKSENRSTRAEKGGEMLPEEATETHDKDQIFLRRFDKMQRDYLKTLVSEEVIEEHRRSPLGQHSEALERLLNYFRRQPQSDKYALEAIEPFKSYRIIAMSGQRGVPPRVVEDKIYKSESEALHAVFVRRVQDLMES
>NC_007947.1|WP_011478523.1|165032_165920_+|branched-chain-amino-acid-ABC-transporter-permease
MDIDIGFVAITAVTLACIYGTLAIGVSITWSSLGLINMSYGFTFATAGYGAWLVSEYISSLGPVVILGGILTGALVGVLVCAVAFIPIHDKPNFTVRGLIASLALSLIGTQALLYFFGPQSKTLPPLFGDWELELGEVVLTADKGGAILTSILMLTLALWWLRSSRRGLEIRAMMMNPHAASLVGIGVRRTGFYVMALTGGLAGLASVLLSQTYFVSPFSGVTPLIKGLSVALCGGLGSVGGAMIAAVMIGVNEALTADILGGQYILITQFLLIILVLIIRPRGIAGILDKQREA
>NC_007947.1|WP_011478522.1|164302_165028_+|ATP-binding-cassette-domain-containing-protein
MSERKEILNIQGLSAGWGPMRVIHDLDLVVYAGERIGIVGLNGHGKSTLFSAIAGMTDWQRGSIKLNGKEVGGTRSQGPGRYTHLVVRQGLALMPQGDEIFTGLTVEEHLDSGAFTPAAWRDRKARKEKILEIFPPLRKLMSTPVGRLSGGERRMVSLGRGLMSDASLLLVDEPSLGLAPKIGKGVMKALMEIELGNSAMIIAEQNMALLEGQVDRVIGMHVGKLKGEASTSLAHEMKREI
>NC_007947.1|WP_011478521.1|163538_164255_+|ABC-transporter-ATP-binding-protein
MTALFEGRDIKLELGGREILKGISLSVEKGEVMGIIGPNGAGKTSLFEVLSGRIFPKSGQVTFKGQDVTSLPLFKRARLGIGRTYQTPLVPDELKVGEVLKAARQAYLPYLTSHDAEWGLDLVNLHVDFDQYARELETLNRRKLLLACLLMRRPPLLLLDEPAAGLINSEVDELDHLMRKLSKEMGVSIIIVEHRMELLEMIADRVMVMDAGEQIAEGTLASVLANPQVHAAYFENVE
>NC_007947.1|WP_011478533.1|176154_177165_+|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF
MSQRSLPDEKSGLHPRNRHRQRYDFALLVEAHPPLAAFVRLNQYEDASIDFADAQAVKTLNQALLKCYYGIAAWDIPPQFLCPPIPGRADYVHCLADLLAAGNDGNMPYGGNVRVLDIGTGANLVYPIIGQKEYGWHFVGTDINVEALENAQGIVAANPGLAGAIELRLQRNVGAVFSGVVQESERFDLTMCNPPFHASQAAAMAGTERKWHHLERSRGKPTGKGVRRVRSGRMSGNRLNFGGQAAELYCEGGEEGFISRMIKESAAVGAQCLWFTTLVSKAATLPAVYRSLRAVDAYKVKTIDMAQGQKKSRFVAWTFHDTAGQRAWRRQHWRDV
>NC_007947.1|WP_011478534.1|177213_178338_-|ABC-transporter-permease
MRHLANIYRLGVKELWSLIRDPVMLVLIGYTFTLMIYSSATAVPETLHKAPIAIVDEDASPLSARIISAFYPPHFSTPPLITQSQIDPGMDAGEYTFALHIPPDFQRDVLAGKSPALQLNVDATRMSQAFSGNRYIQEIVLTEVNEFVQRYRSATELPVELALRMRFNPSLIQSWFGAMNEIINNITMLSIILTGAALIREREHGTIEHLLVMPVTPTEIMLAKVWSMALVVLVASTCSLVFVVEGLLKVPIQGSIGLFLLGATLHLFATTSMGIFMATLARNMPQFGMLLILTLLPLQMLSGGLTPRESMPEFVQNIMLLAPTTHFVELGQAILFRGAGLDVVWGSFLALLLIGTVLFIVSLTRFRNTISRMA
>NC_007947.1|WP_011478535.1|178377_181143_-|ribosome-associated-ATPase/putative-transporter-RbbA
MSDTRQQVASAVRLQDVSLHYGKTIALDGISLDIPASCMVGMIGPDGVGKSSLLSLVAGARAVQTGKVEALGGDMSSKQHRDDVCPRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGHDAQERRRRIDDLTRSTGLQKFLDRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIKRIRQERNSMSVIVATAYMDEAQRFDWLVAMDEGQVLATGTPQELLERTGSSSLETAFIALLPEEKKQGHEEVTIPPLPEGDGSNADIAIEAKDLTMRFGDFVAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQAWLFGHEIDPRDIDTRRRVGYMSQAFSLYTELTVRQNLVLHARLFHVPEADIPARVNEMVQRFDLEEALDSLPDGLPLGIRQRLSLAVAMVHKPELLILDEPTSGVDPVARDNFWRLLIELSRRDRVTIFISTHFMNEAERCDRMSLMHAGKVLVSDTPANIVAQRNADTLEQAFIDYLVEAGGGTDTGTNDTQQTTPSTPDIAQGSHQAKLRFFSFNRMFSYLWREMLELQRDPVRGGLALAGSMLLMFVMGFGISMDVEDLTYAVLDRDQTTLSQNYALNLSGSRYFIEQPPIRDYQELDQRMRSGELSLAIEIPPGFARDVQRGSRAEIGAWVNGAMPQRAETVQGYVQGIHQQWLQQQAQERLGVTVASAATIETRYRYNPDVRSLPAMVPAVIPLLLLMLPAMLSALSVVREKELGSIINLYVTPVTRTEFLLGKQLPYVALAMLNFLLMVLLAVTVFDVPVKGSFATLALAAFLYSIVATGIGLLASTFTRSQIAALFFTMIASIVPAVQFAGMLNPVSSLEGAGRIVGEIYPTTYMLIITRGVFSKALDFSDLQASFWPLLAAIPVVLVTTVLLLKKQDK
>NC_007947.1|WP_011478536.1|181139_182210_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MNPRVKKIVPIVIIAALAAAGLYAWQAMNGDDNTKGLASGNGRIEAVEIDVATKLPGRVEDILVNEGDFVEKGQLLARMQIDVLNAQRDEARAQYQQALNSAVAAQAQVALRESDKRATQALVAQRESELDAAQRRLARSETLSAEGASSIQELDDDRARVRSAQAAVEAAKAQVSAAQAAIDAAKAQVIGARSTVAAAEATIARIEADIADSQLTAPRDGRVQYRIAQPGEVLAGGGKVLNLVDLSDVYMTFFLPQAAAGRLAMGEDARIILDAAPQYVIPATISFVASTAQFTPKTVETESERQKLMFRVKAQIDRGLLHKHLKLVKTGLPGVAWVKVDKQTEWPAELAVKVPE
>NC_007947.1|WP_011478537.1|182224_183706_-|efflux-transporter-outer-membrane-subunit
MKTPPPLPFPRSRHQHWQIAIAALCLALAGCQSMAPDYERPAAPVAEHFPQAGTGTADAPSLAWQDYFADTTLQDLIQEALANNRDLRSAIQRVEGARALYGVQRADLFPGLNAQGSFGRSRTPEDMSLIGRPMVLSEYRVGFGITNWELDFWGRIRSLRDAALETFLAAESAQRASAISLVAQVANSYLNLRELDQRILIAEKTIESRQESVRIFQRRFDVGSTSKLDLKQVQALLAQAQTLRYQLQQSRAIELNALTLLVGKPVDLPPASHAFSETKMLHQLKPGLPSDVLTQRPDIIAAEHILKSANANIGAARAAFFPRVTLTTSLGTASRELDGLFDTGSHAWSFAPSISLPIFDGWRNRSNLELANVRRDLAVTSYEQTIQTAFREVADALAAQHSIRQQLVSQQEMLDAQAERARLAKLRYDHGATSYFEVLDAERSLLEVEQQLVQMQRALFSSQVSLYAALGGGSHSITVPPPSTTPAARQPSN
>NC_007947.1|WP_048811475.1|183810_184539_+|CerR-family-C-terminal-domain-containing-protein
MKLFLPGGIVTPGHGDPPLIRHNMNVSSPLSQPLAVREIRSDGLATRKQLLQSAGEVFAERGYSDTTSKEICERANATVGSVNYHFGSKAGLYHAILAEVTQYLLRMDMLEAIAASQRPAKEKLEKILDLVLVAQASQDWQIRLFFRELTSPSPEFINYLRLDTSPKTGIIKQILSEIVGAPADSAMVDHCLLSIFSLCSFPFMADPRVLGHCVSPTSCEVAPLHQHIKRFILAGLDAFAVR
>NC_007947.1|WP_011478539.1|184556_185549_+|DUF4105-domain-containing-protein
MRRCLHFFKRVLLSTAFVLSAGWGAMALLYQFPFPALKALVVAGWLGVAGLSIFVGRRHGVLRGSLLYMVALAVLLGWWMNLKPSNTREWADDVAETTTAVRHGDVVTFSHVRNFDWRSETDYTSRWEQRQYDLGQLRSVDMLLSYWTVPAIAHTLVSFGFADGRQLVFSVEIRKERHEAFSEIGGFFKQFETSLIVADERDIVRVRTNIRGEDVYLYRINMPQDAMRELFLAYADEANQLAAKPRFYHTVTANCTTVVYEMVRKIIPGLPMDYRLLLSGYLPEYLYGIGGLDKRFPLEVLRQHGRITDRAKAADQDPDFSRLIRSNMPD
>NC_007947.1|WP_011478540.1|185680_186448_+|exodeoxyribonuclease-III
MKLATWNVNSLNVRLPQVLDWIAVEKPDVLCLQETKQEDSKFPFDALKEAGYNAVHSGQKTYNGVAILSPHEIEDVTYGIPGLNDEQKRLVAATINDIRIVCAYIPNGQSLDSDKYQYKLGWLEALTAYLKTELAAHPKLALLGDYNIAPEDRDVHDPVAWAGQVLVSEPERAAFRAIMALGLHDGFRLFDQEPDSFSWWDYRMAGFRRNLGLRIDHILVSEALKSECMRCWIDKGPRKLERPSDHTPVVLQLAC
>NC_007947.1|WP_011478541.1|186596_187172_+|nitroreductase
MRSTDEQTLEAILARRSAWPLSEPAPAPAELESILQAAAVAPDHAGLRPWHFKVVQGDDRQALLHRVLQHPDAQNEQVQVLQGKYTMKLTTAPVVIVLAARITVHPKVPEFEQLLAAGAAVMNMLNAAHLLGYSGFWSSTPEPLAALLHNVMGFGSQERIIGLLNVGMPASAARTAVARPSWQEYAQLWHA
>NC_007947.1|WP_011478542.1|187293_187701_+|hypothetical-protein
MNIASHYEEVVPAALFRRPQSLFIYVKIPIRSRARPDPFHQREHELARLLQEADAGTVIGWGQSFSDAGQDGYQRVVYQRVDITTSDIGKARPVLRTMLETLAVPAGTEVHYTHQGQALMDIYTHGGWRLDQPYT

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Crispr_ID: NC_007947_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007947_2

632592-638820

TypeI

I-C

Consensus_repeat	Method
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	PILER-CR
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CRISPRCasFinder
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CRT

93 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_007947_2

>merge|NC_007947|2|632592-638820|PILER-CR,CRISPRCasFinder,CRT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAACATGTTTGGCACAAGACCAGCGGTTGAACGCACCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACATGAGGTCGCGGAAATCATCCAGGGCGCCGGTGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGAGTCAAAGACAAGCACCGTCCGCTGCTCAATCAAAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAACCAGAAGGGCTGTAAGGGATTCCAGACTGAAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGATTCAACGTGAATGGCGCAGTGGCCGGGCAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACACCATCATGGCAGACGGTGAGGATGACAAAGAAGGGCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGCTTCAGCGCTAGGTGCCGTTAGGCGTTGGGGAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTTTGCGTAATAGGTTCTGCTGGAATAGTGACTCGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGCCTTCGGCCCACGTTTTATAGTCGTCGTACAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTGCGACACCCATCCGCCAGACTGCTTGCCGTCAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCATCCGGGTACGTCTTGCCGCCCATAATGCCAACGTCGCACCCTGCGCGGGTGCGTGAATTGAAACATATCTGACACCCGTTGATTTCCGTCCGTCCGACGTCGCACCCTGCGCGGGTGCGTGAATTGAAACATCTCGAAACTAGCCACCGCAACGGGTTCACCTTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTTGTCTTTGTTGCTCCATACCACCAGGGAGTTATGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTTCTCAACCCGGTTTCTCATTTCTCCAAGCTGACGCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGCACTGTCATGCGCTCAACCAGGTAATATGGCTGAGGGCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGCACAGGACAGAATGACCCCGGATCTGTTCGGTAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTGCGCGTTGTGCAACAGCCAGCTTCGACTCCAGAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACACCATCATGGCAGACGGTGAGGATGACAAAGAAGGGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACATAAGTGTTCAATCTGTGGTCACTGCGGTGAGTGGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTAAGGTTGTGTGCTCTAACGGTTAGAGTGTGCCTGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTGTGCTGCCAGCTTGTAGTTTTCAAAGCTAAGTGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTGACGGCGCTCCCGCATGAAGTCCTCCAGGTCGCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTGCGGCAACTATTCAGCTTGCTGATGGCGAGCGCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCAGACTGAATCCATCGGTTAAGTAGAGTAGATAGCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTACGATCTTACGCACCCTTGCCCGACGGGTTTATGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGAATGCCATTGATATGGTCAACCTGATGGGGCCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTTTTAGCTGGTCGTTTGCAATTTCATAAACAGTCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTCCAAGCTGACGCTTGTATGAGCGTTCCATGGCGGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAACGACAAAGCAGAGAGTGTCGCTAAGTTTATCCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAAATTGATTTAATTCAAACTCGAAAACATACCGGCCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTGAAGCCTGTTTGCTGGATCCAGAAAATTGCATGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTTAAGAGGTGTTTCGATGGTGGTGATTGACATGCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGCGCGTTGCTGGCATGGGTGCCCGATGAGGATCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGAGTACATGATCTTGATGTTTTGCCGCTCGCACTCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGCGCCGCCACGCTCGCCATTGCGCCCACACCTCGGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCAGGCCTGGGGCGGGGCCTCAAAATTAGAGAGCGAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTGCCCTTATGGTGTCGGTTCGCGGGAAGTGTATTCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTGGGACAAGACCAACTGGCAGAGCCTGTGCGATGAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAGGCGAATCAATTAATTCCCTCGGTTTAAAATATCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAGTAGTGGATCGCGGCAGGGCCATTCCCCGGGCCTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTGGGATAAGGACAACTGGCAGAGTCTGTGCGATGAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTGCTTGTCGTTGCTATCTATATCAATGGCTGGCTCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAAACTAATCAATGAATGTCGCCCGCGCTGCCAGGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAGTCAACCCGCAAGGTGATCTGTTTGGCAACTCCGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGACAATCAATAACATCACGGGATTAGTTAGAAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTGACAATTGGGAGTTGTTCGATACTCTCGGAAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTTCATACAAACAGCAAGGATTTTACTTTGTATTTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTTCACTGAGCATGGTATGATTATTGGCCTTGCTTCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTGAGTTGAACGCCAGTCCCAATGTCTCGCAAAAAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGGCCAATATCAAGTGCTGGAACCCCAACCAAGCGAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTGGAAATCATGGGCCTGCCTCCGTTTACACATGAAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTCGGTACGGCTTACAAGCACCGGCACGTTGGCAACAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGGTGTCGATGTCTGGGGCGATGCGAACTACAGCAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTGCCCGCCGTGGCCCAAACCGATCAACCCAGAAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTGTGACCGTCATCAGCATGTCCAGAATTGGTGTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTCGACATCATGGGCCTCCCTCCGTTCACACATGAACGTCGCACCCTGCGCGGGTGCGTGAATTGAAACACCATATCTGCGATGGCCTCAACATGCTTCGACCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAATCAGAGGCGGGGTGACTTCGATGGTGGTGCCGGTGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTCGTCATCACGCAGTTTCCGCACCTGGTGCATGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTGTCGCCCCATACATCAATGCCTTGACGCCAAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTTGTTGCTCCTGGTCGTGGTGCCGATGATGGGCTAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACACACATGAACGGGACATCCCGTCGAGCGGCGATTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTGAGATACGGGACAACAAACGGGTTGCGCAGGACGTCGCACCCTGCGCGGGTGCGTGAATTGAAACACGGAACACTACCCACCCAAGTAAACCAATGAGAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTGCCTCAACAGGCCCGGATGTTTTGAACTGCGAATGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTCAATAATTTCACCTGTACTGGAATCAATCAAATGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTGTGATGAGGGAGAGCATGCCTTGCCAGATCAATGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCTGCATGGCCGCTTGGACATGGCCGACTTGCCGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACATGAATCATGCCATTGCCGAAGATGTCTTAATGACGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTTGCAGTGAGCGTAATTCTTGACCGGCGGCTTCAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACACCCATAAAACGGGGCCAGTTGTCCCATACTAAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTGGATTTGAGAATCATTCATTTGAGCGACATAAGGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGGTTTTCATCCCTTACAGCTACCGCGACCAGGCTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCAGTACTACCACCAGAACAGAAACGCCGGCGACAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACACGCCGATGGAAACCAATGGCGTCGACCGTGACCTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAGACTCAGGAACAGACAATTTGTCAAGAAGTAATGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGCAGACTCTCGCCATTGGCTATCCGTACGCAGATGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGCACAATCAGATCAGGAGCTACATTCCCCACTGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACAAATCAGCAACTTGACGTTGATGAGCAGTATTGGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCCTTGCTGCGGCAGCAGCCGAACAAACGCCGCCTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGAGCCGACCAGCTTGAGGAAACCACCCGGAAACTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTCATAGCTGAGGGCTATCAGATCGCCAGTATAGAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTCTGGATGGCCTCGAATCCGTTGTAATCAGTCTCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCAGGCTGGATCCCGGATATTACTCGCCAACAACAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGTGAACAGGTCACGACTTTAAATCTTAATCGTTTTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGCCCGGGCGCACCTCCCAAGGTCGCGCGAGCACGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCACCGCGATGATGAGCGTTTCCTGCGCTGGTTGCGTCGCACCCTGCGCGGGTGCGTGAATTGAAACTTTTGTGTAGGCAAGATTCTAGTATCGTGCTTGCTGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCGCACAGGGGAGATGATGAGCGGCGTTACGGGCTGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGCCATCCGCGGCACGGGCAATGTCGACAATATTGAGTCGCACCCTGCGCGGGTGCGTGAATTGAAACCCAGTCAATGTTCGACCACGGGTCAAATACCCAGGTCGCACCCTGCGCGGGTGCGTGAATTGAAACGGTTGCCTGGCTGAATGGATAGAAAGGGGACATTGTCGCACCCTGCGAGTGAGTGGCTGGTGAGCA

>NC_007947|2|2|632592-638754|PILER-CR
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGTTTGGCACAAGACCAGCGGTTGAACGCACC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGAGGTCGCGGAAATCATCCAGGGCGCCGGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGTCAAAGACAAGCACCGTCCGCTGCTCAATCAAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AACCAGAAGGGCTGTAAGGGATTCCAGACTGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGATTCAACGTGAATGGCGCAGTGGCCGGGCAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATCATGGCAGACGGTGAGGATGACAAAGAAGGGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCTTCAGCGCTAGGTGCCGTTAGGCGTTGGGGAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTTGCGTAATAGGTTCTGCTGGAATAGTGACTCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCCTTCGGCCCACGTTTTATAGTCGTCGTACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGCGACACCCATCCGCCAGACTGCTTGCCGTCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CATCCGGGTACGTCTTGCCGCCCATAATGCCAAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATATCTGACACCCGTTGATTTCCGTCCGTCCGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATCTCGAAACTAGCCACCGCAACGGGTTCACCTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGTCTTTGTTGCTCCATACCACCAGGGAGTTATG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTCTCAACCCGGTTTCTCATTTCTCCAAGCTGACGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCACTGTCATGCGCTCAACCAGGTAATATGGCTGAGGGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCACAGGACAGAATGACCCCGGATCTGTTCGGTA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCGCGTTGTGCAACAGCCAGCTTCGACTCCAGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATCATGGCAGACGGTGAGGATGACAAAGAAGGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATAAGTGTTCAATCTGTGGTCACTGCGGTGAGTGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TAAGGTTGTGTGCTCTAACGGTTAGAGTGTGCCTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGTGCTGCCAGCTTGTAGTTTTCAAAGCTAAGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGACGGCGCTCCCGCATGAAGTCCTCCAGGTCGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCGGCAACTATTCAGCTTGCTGATGGCGAGCGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGACTGAATCCATCGGTTAAGTAGAGTAGATAGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TACGATCTTACGCACCCTTGCCCGACGGGTTTAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGAATGCCATTGATATGGTCAACCTGATGGGGCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTTTTAGCTGGTCGTTTGCAATTTCATAAACAGTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCCAAGCTGACGCTTGTATGAGCGTTCCATGGCGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AACGACAAAGCAGAGAGTGTCGCTAAGTTTATCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAATTGATTTAATTCAAACTCGAAAACATACCGGCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAAGCCTGTTTGCTGGATCCAGAAAATTGCAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTTAAGAGGTGTTTCGATGGTGGTGATTGACATGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCGCGTTGCTGGCATGGGTGCCCGATGAGGATC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGTACATGATCTTGATGTTTTGCCGCTCGCACTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCGCCGCCACGCTCGCCATTGCGCCCACACCTCGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGGCCTGGGGCGGGGCCTCAAAATTAGAGAGCGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCCTTATGGTGTCGGTTCGCGGGAAGTGTATTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGGACAAGACCAACTGGCAGAGCCTGTGCGATGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGGCGAATCAATTAATTCCCTCGGTTTAAAATATC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGTAGTGGATCGCGGCAGGGCCATTCCCCGGGCCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGGATAAGGACAACTGGCAGAGTCTGTGCGATGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCTTGTCGTTGCTATCTATATCAATGGCTGGCTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAACTAATCAATGAATGTCGCCCGCGCTGCCAGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGTCAACCCGCAAGGTGATCTGTTTGGCAACTCCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGACAATCAATAACATCACGGGATTAGTTAGAAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGACAATTGGGAGTTGTTCGATACTCTCGGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTCATACAAACAGCAAGGATTTTACTTTGTATTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTTCACTGAGCATGGTATGATTATTGGCCTTGCTTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGAGTTGAACGCCAGTCCCAATGTCTCGCAAAAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGGCCAATATCAAGTGCTGGAACCCCAACCAAGCGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGAAATCATGGGCCTGCCTCCGTTTACACATGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTCGGTACGGCTTACAAGCACCGGCACGTTGGCAACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGGTGTCGATGTCTGGGGCGATGCGAACTACAGCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCCGCCGTGGCCCAAACCGATCAACCCAGAAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGTGACCGTCATCAGCATGTCCAGAATTGGTGT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCGACATCATGGGCCTCCCTCCGTTCACACATGAAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATATCTGCGATGGCCTCAACATGCTTCGACC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AATCAGAGGCGGGGTGACTTCGATGGTGGTGCCGGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTCGTCATCACGCAGTTTCCGCACCTGGTGCAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGTCGCCCCATACATCAATGCCTTGACGCCAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGTTGCTCCTGGTCGTGGTGCCGATGATGGGCTA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACACATGAACGGGACATCCCGTCGAGCGGCGATT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAGATACGGGACAACAAACGGGTTGCGCAGGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACGGAACACTACCCACCCAAGTAAACCAATGAGAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCTCAACAGGCCCGGATGTTTTGAACTGCGAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCAATAATTTCACCTGTACTGGAATCAATCAAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGTGATGAGGGAGAGCATGCCTTGCCAGATCAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCATGGCCGCTTGGACATGGCCGACTTGCCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGAATCATGCCATTGCCGAAGATGTCTTAATGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGCAGTGAGCGTAATTCTTGACCGGCGGCTTCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCCATAAAACGGGGCCAGTTGTCCCATACTAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGATTTGAGAATCATTCATTTGAGCGACATAAGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GGTTTTCATCCCTTACAGCTACCGCGACCAGGCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGTACTACCACCAGAACAGAAACGCCGGCGACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACGCCGATGGAAACCAATGGCGTCGACCGTGACCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGACTCAGGAACAGACAATTTGTCAAGAAGTAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCAGACTCTCGCCATTGGCTATCCGTACGCAGATG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCACAATCAGATCAGGAGCTACATTCCCCACTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAATCAGCAACTTGACGTTGATGAGCAGTATTGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CCTTGCTGCGGCAGCAGCCGAACAAACGCCGCCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGCCGACCAGCTTGAGGAAACCACCCGGAAACT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCATAGCTGAGGGCTATCAGATCGCCAGTATAGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCTGGATGGCCTCGAATCCGTTGTAATCAGTCTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGGCTGGATCCCGGATATTACTCGCCAACAACA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAACAGGTCACGACTTTAAATCTTAATCGTTTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCCCGGGCGCACCTCCCAAGGTCGCGCGAGCAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CACCGCGATGATGAGCGTTTCCTGCGCTGGTTGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTTTGTGTAGGCAAGATTCTAGTATCGTGCTTGCTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCACAGGGGAGATGATGAGCGGCGTTACGGGCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCCATCCGCGGCACGGGCAATGTCGACAATATTGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CCAGTCAATGTTCGACCACGGGTCAAATACCCAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC

>NC_007947|2|2|632592-638754|CRISPRCasFinder
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGTTTGGCACAAGACCAGCGGTTGAACGCACC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGAGGTCGCGGAAATCATCCAGGGCGCCGGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGTCAAAGACAAGCACCGTCCGCTGCTCAATCAAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AACCAGAAGGGCTGTAAGGGATTCCAGACTGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGATTCAACGTGAATGGCGCAGTGGCCGGGCAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATCATGGCAGACGGTGAGGATGACAAAGAAGGGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCTTCAGCGCTAGGTGCCGTTAGGCGTTGGGGAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTTGCGTAATAGGTTCTGCTGGAATAGTGACTCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCCTTCGGCCCACGTTTTATAGTCGTCGTACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGCGACACCCATCCGCCAGACTGCTTGCCGTCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CATCCGGGTACGTCTTGCCGCCCATAATGCCAAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATATCTGACACCCGTTGATTTCCGTCCGTCCGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATCTCGAAACTAGCCACCGCAACGGGTTCACCTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGTCTTTGTTGCTCCATACCACCAGGGAGTTATG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTCTCAACCCGGTTTCTCATTTCTCCAAGCTGACGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCACTGTCATGCGCTCAACCAGGTAATATGGCTGAGGGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCACAGGACAGAATGACCCCGGATCTGTTCGGTA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCGCGTTGTGCAACAGCCAGCTTCGACTCCAGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATCATGGCAGACGGTGAGGATGACAAAGAAGGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATAAGTGTTCAATCTGTGGTCACTGCGGTGAGTGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TAAGGTTGTGTGCTCTAACGGTTAGAGTGTGCCTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGTGCTGCCAGCTTGTAGTTTTCAAAGCTAAGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGACGGCGCTCCCGCATGAAGTCCTCCAGGTCGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCGGCAACTATTCAGCTTGCTGATGGCGAGCGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGACTGAATCCATCGGTTAAGTAGAGTAGATAGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TACGATCTTACGCACCCTTGCCCGACGGGTTTAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGAATGCCATTGATATGGTCAACCTGATGGGGCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTTTTAGCTGGTCGTTTGCAATTTCATAAACAGTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCCAAGCTGACGCTTGTATGAGCGTTCCATGGCGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AACGACAAAGCAGAGAGTGTCGCTAAGTTTATCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAATTGATTTAATTCAAACTCGAAAACATACCGGCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAAGCCTGTTTGCTGGATCCAGAAAATTGCAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTTAAGAGGTGTTTCGATGGTGGTGATTGACATGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCGCGTTGCTGGCATGGGTGCCCGATGAGGATC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGTACATGATCTTGATGTTTTGCCGCTCGCACTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCGCCGCCACGCTCGCCATTGCGCCCACACCTCGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGGCCTGGGGCGGGGCCTCAAAATTAGAGAGCGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCCTTATGGTGTCGGTTCGCGGGAAGTGTATTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGGACAAGACCAACTGGCAGAGCCTGTGCGATGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGGCGAATCAATTAATTCCCTCGGTTTAAAATATC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGTAGTGGATCGCGGCAGGGCCATTCCCCGGGCCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGGATAAGGACAACTGGCAGAGTCTGTGCGATGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCTTGTCGTTGCTATCTATATCAATGGCTGGCTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAACTAATCAATGAATGTCGCCCGCGCTGCCAGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGTCAACCCGCAAGGTGATCTGTTTGGCAACTCCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGACAATCAATAACATCACGGGATTAGTTAGAAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGACAATTGGGAGTTGTTCGATACTCTCGGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTCATACAAACAGCAAGGATTTTACTTTGTATTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTTCACTGAGCATGGTATGATTATTGGCCTTGCTTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGAGTTGAACGCCAGTCCCAATGTCTCGCAAAAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGGCCAATATCAAGTGCTGGAACCCCAACCAAGCGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGAAATCATGGGCCTGCCTCCGTTTACACATGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTCGGTACGGCTTACAAGCACCGGCACGTTGGCAACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGGTGTCGATGTCTGGGGCGATGCGAACTACAGCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCCGCCGTGGCCCAAACCGATCAACCCAGAAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGTGACCGTCATCAGCATGTCCAGAATTGGTGT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCGACATCATGGGCCTCCCTCCGTTCACACATGAAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATATCTGCGATGGCCTCAACATGCTTCGACC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AATCAGAGGCGGGGTGACTTCGATGGTGGTGCCGGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTCGTCATCACGCAGTTTCCGCACCTGGTGCAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGTCGCCCCATACATCAATGCCTTGACGCCAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGTTGCTCCTGGTCGTGGTGCCGATGATGGGCTA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACACATGAACGGGACATCCCGTCGAGCGGCGATT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAGATACGGGACAACAAACGGGTTGCGCAGGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACGGAACACTACCCACCCAAGTAAACCAATGAGAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCTCAACAGGCCCGGATGTTTTGAACTGCGAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCAATAATTTCACCTGTACTGGAATCAATCAAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGTGATGAGGGAGAGCATGCCTTGCCAGATCAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCATGGCCGCTTGGACATGGCCGACTTGCCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGAATCATGCCATTGCCGAAGATGTCTTAATGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGCAGTGAGCGTAATTCTTGACCGGCGGCTTCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCCATAAAACGGGGCCAGTTGTCCCATACTAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGATTTGAGAATCATTCATTTGAGCGACATAAGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GGTTTTCATCCCTTACAGCTACCGCGACCAGGCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGTACTACCACCAGAACAGAAACGCCGGCGACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACGCCGATGGAAACCAATGGCGTCGACCGTGACCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGACTCAGGAACAGACAATTTGTCAAGAAGTAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCAGACTCTCGCCATTGGCTATCCGTACGCAGATG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCACAATCAGATCAGGAGCTACATTCCCCACTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAATCAGCAACTTGACGTTGATGAGCAGTATTGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CCTTGCTGCGGCAGCAGCCGAACAAACGCCGCCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGCCGACCAGCTTGAGGAAACCACCCGGAAACT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCATAGCTGAGGGCTATCAGATCGCCAGTATAGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCTGGATGGCCTCGAATCCGTTGTAATCAGTCTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGGCTGGATCCCGGATATTACTCGCCAACAACA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAACAGGTCACGACTTTAAATCTTAATCGTTTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCCCGGGCGCACCTCCCAAGGTCGCGCGAGCAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CACCGCGATGATGAGCGTTTCCTGCGCTGGTTGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTTTGTGTAGGCAAGATTCTAGTATCGTGCTTGCTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCACAGGGGAGATGATGAGCGGCGTTACGGGCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCCATCCGCGGCACGGGCAATGTCGACAATATTGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CCAGTCAATGTTCGACCACGGGTCAAATACCCAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC

>NC_007947|2|1|632592-638820|CRT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGTTTGGCACAAGACCAGCGGTTGAACGCACC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGAGGTCGCGGAAATCATCCAGGGCGCCGGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGTCAAAGACAAGCACCGTCCGCTGCTCAATCAAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AACCAGAAGGGCTGTAAGGGATTCCAGACTGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGATTCAACGTGAATGGCGCAGTGGCCGGGCAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATCATGGCAGACGGTGAGGATGACAAAGAAGGGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCTTCAGCGCTAGGTGCCGTTAGGCGTTGGGGAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTTGCGTAATAGGTTCTGCTGGAATAGTGACTCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCCTTCGGCCCACGTTTTATAGTCGTCGTACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGCGACACCCATCCGCCAGACTGCTTGCCGTCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CATCCGGGTACGTCTTGCCGCCCATAATGCCAAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATATCTGACACCCGTTGATTTCCGTCCGTCCGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATCTCGAAACTAGCCACCGCAACGGGTTCACCTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGTCTTTGTTGCTCCATACCACCAGGGAGTTATG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTCTCAACCCGGTTTCTCATTTCTCCAAGCTGACGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCACTGTCATGCGCTCAACCAGGTAATATGGCTGAGGGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCACAGGACAGAATGACCCCGGATCTGTTCGGTA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCGCGTTGTGCAACAGCCAGCTTCGACTCCAGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATCATGGCAGACGGTGAGGATGACAAAGAAGGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATAAGTGTTCAATCTGTGGTCACTGCGGTGAGTGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TAAGGTTGTGTGCTCTAACGGTTAGAGTGTGCCTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGTGCTGCCAGCTTGTAGTTTTCAAAGCTAAGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGACGGCGCTCCCGCATGAAGTCCTCCAGGTCGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCGGCAACTATTCAGCTTGCTGATGGCGAGCGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGACTGAATCCATCGGTTAAGTAGAGTAGATAGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TACGATCTTACGCACCCTTGCCCGACGGGTTTAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGAATGCCATTGATATGGTCAACCTGATGGGGCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTTTTAGCTGGTCGTTTGCAATTTCATAAACAGTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCCAAGCTGACGCTTGTATGAGCGTTCCATGGCGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AACGACAAAGCAGAGAGTGTCGCTAAGTTTATCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAATTGATTTAATTCAAACTCGAAAACATACCGGCC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAAGCCTGTTTGCTGGATCCAGAAAATTGCAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTTAAGAGGTGTTTCGATGGTGGTGATTGACATGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCGCGTTGCTGGCATGGGTGCCCGATGAGGATC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGTACATGATCTTGATGTTTTGCCGCTCGCACTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCGCCGCCACGCTCGCCATTGCGCCCACACCTCGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGGCCTGGGGCGGGGCCTCAAAATTAGAGAGCGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCCTTATGGTGTCGGTTCGCGGGAAGTGTATTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGGACAAGACCAACTGGCAGAGCCTGTGCGATGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGGCGAATCAATTAATTCCCTCGGTTTAAAATATC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGTAGTGGATCGCGGCAGGGCCATTCCCCGGGCCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGGATAAGGACAACTGGCAGAGTCTGTGCGATGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCTTGTCGTTGCTATCTATATCAATGGCTGGCTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAACTAATCAATGAATGTCGCCCGCGCTGCCAGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGTCAACCCGCAAGGTGATCTGTTTGGCAACTCCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGACAATCAATAACATCACGGGATTAGTTAGAAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGACAATTGGGAGTTGTTCGATACTCTCGGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTCATACAAACAGCAAGGATTTTACTTTGTATTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTTCACTGAGCATGGTATGATTATTGGCCTTGCTTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGAGTTGAACGCCAGTCCCAATGTCTCGCAAAAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGGCCAATATCAAGTGCTGGAACCCCAACCAAGCGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGAAATCATGGGCCTGCCTCCGTTTACACATGAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTCGGTACGGCTTACAAGCACCGGCACGTTGGCAACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGGTGTCGATGTCTGGGGCGATGCGAACTACAGCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCCGCCGTGGCCCAAACCGATCAACCCAGAAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGTGACCGTCATCAGCATGTCCAGAATTGGTGT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCGACATCATGGGCCTCCCTCCGTTCACACATGAAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCATATCTGCGATGGCCTCAACATGCTTCGACC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AATCAGAGGCGGGGTGACTTCGATGGTGGTGCCGGTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTCGTCATCACGCAGTTTCCGCACCTGGTGCAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGTCGCCCCATACATCAATGCCTTGACGCCAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGTTGCTCCTGGTCGTGGTGCCGATGATGGGCTA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACACATGAACGGGACATCCCGTCGAGCGGCGATT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAGATACGGGACAACAAACGGGTTGCGCAGGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACGGAACACTACCCACCCAAGTAAACCAATGAGAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGCCTCAACAGGCCCGGATGTTTTGAACTGCGAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCAATAATTTCACCTGTACTGGAATCAATCAAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGTGATGAGGGAGAGCATGCCTTGCCAGATCAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CTGCATGGCCGCTTGGACATGGCCGACTTGCCG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ATGAATCATGCCATTGCCGAAGATGTCTTAATGAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTGCAGTGAGCGTAATTCTTGACCGGCGGCTTCA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACCCATAAAACGGGGCCAGTTGTCCCATACTAA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TGGATTTGAGAATCATTCATTTGAGCGACATAAGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GGTTTTCATCCCTTACAGCTACCGCGACCAGGCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGTACTACCACCAGAACAGAAACGCCGGCGACAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	ACGCCGATGGAAACCAATGGCGTCGACCGTGACCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AGACTCAGGAACAGACAATTTGTCAAGAAGTAAT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCAGACTCTCGCCATTGGCTATCCGTACGCAGATG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCACAATCAGATCAGGAGCTACATTCCCCACTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	AAATCAGCAACTTGACGTTGATGAGCAGTATTGG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CCTTGCTGCGGCAGCAGCCGAACAAACGCCGCCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GAGCCGACCAGCTTGAGGAAACCACCCGGAAACT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCATAGCTGAGGGCTATCAGATCGCCAGTATAGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TCTGGATGGCCTCGAATCCGTTGTAATCAGTCTC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CAGGCTGGATCCCGGATATTACTCGCCAACAACA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GTGAACAGGTCACGACTTTAAATCTTAATCGTTTT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCCCGGGCGCACCTCCCAAGGTCGCGCGAGCAC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CACCGCGATGATGAGCGTTTCCTGCGCTGGTTGC
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	TTTTGTGTAGGCAAGATTCTAGTATCGTGCTTGCTG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CGCACAGGGGAGATGATGAGCGGCGTTACGGGCT
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GCCATCCGCGGCACGGGCAATGTCGACAATATTGA
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	CCAGTCAATGTTCGACCACGGGTCAAATACCCAG
GTCGCACCCTGCGCGGGTGCGTGAATTGAAAC	GGTTGCCTGGCTGAATGGATAGAAAGGGGACATT
GTCGCACCCTGCGAGTGAGTGGCTGGTGAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NC_007947.1\|WP_011478975.1\|639058_640609_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|227279
NC_007947.1\|WP_011478974.1\|632122_632416_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_007947.1\|WP_011478982.1\|645881_646835_+\|serine-acetyltransferase	unknown	unknown	gnl\|CDD\|200082
NC_007947.1\|WP_011478976.1\|640654_641734_-\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
NC_007947.1\|WP_011478969.1\|627025_627703_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NC_007947.1\|WP_011478965.1\|622015_622663_-\|deoxynucleoside-kinase	unknown	unknown	gnl\|CDD\|238836
NC_007947.1\|WP_011478971.1\|629532_630414_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_007947.1\|WP_011478983.1\|646893_647811_+\|hypothetical-protein	unknown	unknown	unknown
NC_007947.1\|WP_011478972.1\|630451_631102_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NC_007947.1\|WP_011478973.1\|631098_632115_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_007947.1\|WP_011478985.1\|649741_649957_-\|transporter	unknown	unknown	gnl\|CDD\|226113
NC_007947.1\|WP_011478981.1\|644536_645526_-\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529
NC_007947.1\|WP_011478970.1\|627699_629514_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|187887
NC_007947.1\|WP_011478984.1\|647797_649663_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|99746
NC_007947.1\|WP_011478986.1\|649999_650359_-\|DUF2325-domain-containing-protein	unknown	unknown	gnl\|CDD\|226813
NC_007947.1\|WP_011478977.1\|641769_642666_-\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
NC_007947.1\|WP_011478978.1\|642679_643519_-\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
NC_007947.1\|WP_011478966.1\|622659_623151_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|238269
NC_007947.1\|WP_011478967.1\|623152_624511_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997
NC_007947.1\|WP_011478968.1\|624681_626919_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688

Protein	Function_ID	Function_description	E-value
NC_007947.1\|WP_011478975.1\|639058_640609_+\|EAL-domain-containing-protein	gnl\|CDD\|227279	COG4943, COG4943, Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms].	3.15483e-99
NC_007947.1\|WP_011478974.1\|632122_632416_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.77386e-30
NC_007947.1\|WP_011478982.1\|645881_646835_+\|serine-acetyltransferase	gnl\|CDD\|200082	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase. Cysteine biosynthesis [Amino acid biosynthesis, Serine family].	5.57389e-56
NC_007947.1\|WP_011478976.1\|640654_641734_-\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.88932e-172
NC_007947.1\|WP_011478969.1\|627025_627703_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.05905e-124
NC_007947.1\|WP_011478965.1\|622015_622663_-\|deoxynucleoside-kinase	gnl\|CDD\|238836	cd01673, dNK, Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC 2.7.1.21) kinases. They are key enzymes in the salvage of deoxyribonucleosides originating from extra- or intracellular breakdown of DNA.	1.31449e-63
NC_007947.1\|WP_011478971.1\|629532_630414_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.39453e-150
NC_007947.1\|WP_011478972.1\|630451_631102_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.60028e-42
NC_007947.1\|WP_011478973.1\|631098_632115_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_007947.1\|WP_011478985.1\|649741_649957_-\|transporter	gnl\|CDD\|226113	COG3585, MopI, Molybdopterin-binding protein [Coenzyme metabolism].	8.75621e-17
NC_007947.1\|WP_011478981.1\|644536_645526_-\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
NC_007947.1\|WP_011478970.1\|627699_629514_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0
NC_007947.1\|WP_011478984.1\|647797_649663_+\|cysteine-desulfurase	gnl\|CDD\|99746	cd06453, SufS_like, Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.	0
NC_007947.1\|WP_011478986.1\|649999_650359_-\|DUF2325-domain-containing-protein	gnl\|CDD\|226813	COG4378, COG4378, Uncharacterized protein conserved in bacteria [Function unknown].	3.16466e-20
NC_007947.1\|WP_011478977.1\|641769_642666_-\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	4.03051e-153
NC_007947.1\|WP_011478978.1\|642679_643519_-\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	1.12999e-148
NC_007947.1\|WP_011478966.1\|622659_623151_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|238269	cd00483, HPPK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is HPPK which catalyzes pyrophosphoryl transfer from ATP to 6-hydroxymethyl-7,8-dihydropterin (HP). The functional enzyme is a monomer. Mammals lack many of the enzymes in the folate pathway including, HPPK.	1.21677e-64
NC_007947.1\|WP_011478967.1\|623152_624511_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	1.69486e-153
NC_007947.1\|WP_011478968.1\|624681_626919_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.658e-60

>NC_007947.1|WP_011478974.1|632122_632416_+|CRISPR-associated-endonuclease-Cas2
MLILITYDVSVLTKSGQRRLRAIARTCLDYGMRVQNSVFECEVTPDQYVRLKNELLNIYDPHQDSLRFYMLGSKGRQKIEHWGAKVIPDPIKDALII
>NC_007947.1|WP_011478973.1|631098_632115_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYVTRQETYVHKERDTIVINSAGEKLAQFPALTISNILCFGQVSVSPPMMGYCGENGIGLVFYTEYGRFLARMIGKQTGNVLLRRTQYRLADDPEKANAIARVMVGAKIANARTVLMREIRNHGEHANISRAVEQLGYSLKSCQFSQSVPQTMGIEGDAAATYFSVFNGLIRGSRFQFNGRIRRPATDPVNALLSFIYSLITQECVSALMGVGLDPYVGFLHQDRPGRPSLALDLLEEFRASWADRFVLTLLNRRQLSPQAFVTEASGAVRLTDDTRKQVLVAFQERKQEEVVHPYLQEKVPYGLLPHCQALLLARHLRGDMEFYTPYLIK
>NC_007947.1|WP_011478972.1|630451_631102_+|CRISPR-associated-protein-Cas4
MMVAEAKEMEVLTISALQHVAYCPRQFALIHVEQVWEENFFTAHGQVLHQRVDAGAAEQRGNVRSERAVSVYSTKLGLSGKLDLLEVDVSGENTRYFPVEYKRGKPKVEDWDRIQLCAQAMCLEEMRGIRITEGAMWYWQERKRQSVQIDQTLRDATVSAIKLAREILLSGRTPSPVKEKSRCKACSLNELCVPDAIRKDNSANYVEQMFHQGVHA
>NC_007947.1|WP_011478971.1|629532_630414_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MAITNRYEFVYFFDVTNGNPNGDPDAGNMPRLDPDSSKGLVTDVCLKRKIRNFVELTEEGHPGFEIYVKEKGILNLQNKKAYEALSITPEPKKLPKDEAKAREVTAWMCANFFDVRTFGAVMTTEVNSGQVRGPVQLAFAKSIDPIIPLELSITRMAVTTEKEAEAQSGGNRTMGRKHIVPYGLYRVHGFVSAKLSEKTGFSDDDLAKLWQALTLMFEHDRSAARGEMAARKLVVFKHADALGSAPAHLLFDRVKVERVSGERDTPATTFSDYRIVLDTNGLDALGVTVEEKF
>NC_007947.1|WP_011478970.1|627699_629514_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSALVGYYQRLLNHPDPNTGQPKVPAYGYSAEKIAYVILLSRDGEVVDVQSNLDTTGKKPVPRLISVPRPEKRTSGIKPNFMWDKTAYVLGVESNKDKSAAKEQPWVVADKTFQAFKQLHLEKLQSVEDVGLQALCKFLQSWQPTEFAQAPFSAEMVDANVVFRLDGDYEFLHEKPETRQIWGAMLVPDDDALIAPCLVTGEASAVARLHPPIKGVYGGQSSGGSIVSFNADAYASYGKVQGENAPVSEAAAFAYTTALNYLLRRDNRQCVSIGDASTVFWAVASDETSAQEAEQFFAACFDRPVDDAEEQARIRPFLEKISHGRPLAECNPGVDLQTRFYILGLAPNAARISIRYWMDTTFGELAEHVAQHFRDMQLEPCAWREPPSIWRLLIQTAAQGKSENIPPQLAGELMRSIVTGQRYPRMLLSQLTQRVRVDGDVTGLRAALIKAVLQRDYRKRLIQEEVPVGLDRDNKNVAYLLGRLFAVIERIQEATLGDVNSSVVDKYYGSASSIPFSVFPRLLAGSQNHLAKLRRDKHGYAVLLGRDMGEIVDGLGGTFPKHFSMEDQGRFAIGYYQQKQHYFTTRGSKNEKVLEADAVPED
>NC_007947.1|WP_011478969.1|627025_627703_+|type-I-C-CRISPR-associated-protein-Cas5
MAYGVRLHVWGDYACFTRPEMKVERVSYDVMTPSAARGILTAIHWKPAIRWVVDSIHVLKPIRFESIRRNEVGSKASASKASGGMARGSVEGIYTLIEEDRQQRASTVLRDVAYVIEAHFELTELAGEGDNPGKHLDIFNRRARRGQCHHQPCMGVREFPAFFSLIEPEMALPASILSDEQKSRDLGWMLHDIDFDHGATPRFFRAALVNGVMSVPPFHSEEAKS
>NC_007947.1|WP_011478968.1|624681_626919_+|CRISPR-associated-helicase/endonuclease-Cas3
MAYFAHSGIAEDLSDGQRLADHLHAVAKLARESATWFGWQDWAYIAGLLHDLGKYCPEFQARLHGSLKRVDHATAGAKQSVERWGKSGKLLAYCIAGHHTGLANGREGGQDRYALDKRLSTEYGKQLPVLDPVWQEELSLPEHLPMAEFIWHQSPAQAGLQLALLTRMIFSCLIDADRTDTRRHYDKLDGKQVTTHSLPTLEQLREALDATLDCFKAVPAPEGSVNQLRQEILGHARSQALQKPGLFSLTVPTGGGKTYTSMAFALDHAIAHGMRRVIYVIPFTSIIEQNAKVLREAFGPLGDDAVLEHHSAFDASKLPTQTARDHLKQAMESWNKPVVVTTAVQFFESLFSDRPSQCRKLHNIAGSVVILDEAQVLPLKLLRPIMAVIDELARNYKCSVVLCTATQPALKKDQGFINGFDGVREIVPVPEALFKKFKRTEVKSIGLQQDEDLVRHLTEREQVLMIVNNRRHARALYDAVAHLPEAMHLTTLMCARHRSQVLARVRLNLRDGKPCRLISTSLIEAGVDVDFPCVMRAEAGLDSIAQAAGRCNREGRRSPEQSEVLVFQSPEWKAPPELDQLAGNMREVMRNHAGDLLAPEALTMYFKGVYWAQGAELDSKRLLEIHREHARDFSFPFQDIARDFCMIEAHMKPVIVPFDDEARELIDALPHAEHIGGIARKLQQYLVQVPEKSFAELVKSGSVQAIAPEVLGDQFWRLVNESLYDAEAGLSFDNPFYIKAENLAI
>NC_007947.1|WP_011478967.1|623152_624511_-|polynucleotide-adenylyltransferase-PcnB
MIKKLLQRVFKSPKKPASTTPVHSQANIERIPAAVHRIDRRLISNAAIKTTDALQKAGFEAFIVGGAVRDLLLKKRPKDFDVATDATPEQVHRIFRRSRIIGRRFRLVHVMFGDETIEVSTFRGSHLAEAGDAKVTDSGRILRDNVFGSQEEDAARRDFTANALYYDPSTEEVLDFHRGVADLQAGVLRMIGDPVTRYREDPVRMLRAVRLSAKLGLKLAPETERPILELAELLHDVPPSRLFDEMLKLFLSGHAIESANALRQHGLHHGLLPLLDVVLEQPMGERFVRLALKNTDERVLADKPVSPGFLFAALLWHEVLLAWKKFEQQGNKPIPALHMAMDEVCDIQAEKMAIHKRYSVTMREIWSLQPRFEQRAGRRPYSLLENPRYRAGYDFLLLRCESGELPNEIGQWWTDFANADGEQRQAMLLPDTAPRKRRRRRSRKPSSSAAEE
>NC_007947.1|WP_011478966.1|622659_623151_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MALAYIALGSNLRDPMHEVGQAMTELDTLPETRLVKASSLYCTAPVGYDNQPDFINAVAAIDTGLEPMALLQAILDLENRHGRERPFPNAPRVLDLDLLLYEQVVMNTPALTLPHPRMHQRGFVLLPLAEIAPELHIAGYGSVADLAKQCADQGVVLLQEQST
>NC_007947.1|WP_011478965.1|622015_622663_-|deoxynucleoside-kinase
MSIFDRFHYIVVEGPIGSGKTTLANKLADMFPVNLLLENAGANPFLPKFYQDAPRYALPTQMFFLFQRVEQIRDLIQRDMFNQATIADFFLEKDPLFAQMNLNDEEYALYRQMYKHLHVQVPTPDLVIYLQSPVETLHERVNQRGNAYEQEIPREYLARLSDAYSDFFHRYDGAPVLIVNNEKLDITEKQGAIQMLLDRIMQMRSRREFFNPNLE
>NC_007947.1|WP_011478975.1|639058_640609_+|EAL-domain-containing-protein
MIGRGWVGTFKQWLEFSLVAFAVLFFAMAFLFLGNVVMLQGDRQDLQSYSNDLFARAVAVAAETEKILDSDWGTEAPCSEDDLDRMRYVIFYSRMLRDVGRLEVNRLLCSAGWGALPDELQALPPSQYHIGAVRFWSKIINPAHPQVISDIAAKGDIFVATSPAAFDRFSSPPSGIGAKVVTSDGQYVFEKFGEADAINYVPAEQWRDQGSTLRFVRCDEKYALCVVSQKTDGGLFSREIVLPVVLALAGTLFGLFAGLVGVIQLRHQQSLPVRLRKMLREKSLVLHYQPLRVLSSGKLVGAEALARWPLHNGSSVSPDKFIPLAEELGLMSELTRLVVEKALAEMGARLREDPGFYISINITAADLLDHDFGKVLDASVKHHGVSPAQVVLEITERTTSDYSQLDGAMRSLSQKGFRFYMDDFGTGYSNLGSLAQLPLDAIKVDKVFVKAIGTDSPVAEMFGPISKIAQDLRVNIVAEGIETAEQSSGVLQWVPDAIGQGWLLGRPVPAAMFPAN
>NC_007947.1|WP_011478976.1|640654_641734_-|sulfate-ABC-transporter-ATP-binding-protein
MSIEIRNIKKEFGSFTALGNVSLDVPSGELVALLGPSGCGKTTLLRIIAGLETPDSGSIHFHGEEATNRDVRERQVGFVFQHYALFRHMTVFENVAFGLRVRPKKTRPSDAEIHRRVHQLLSLVQLDWLADRYPPQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKDLRRWLRRLHDELHITSVFVTHDQEEALEVADRIVVMNQGKIEQIGSPQEVYDNPASPFVYKFLGNVNQFYSRVDQGQAHIGNIALNLNEHHTVQNSDALAYVRPHDIDIYTEQNGHPALQAVVSYIHAAGPLVRLELQPVNEADIIEAEITRERFRELGIDQGSHVYLRPRSVQVFLEGNTSNAA
>NC_007947.1|WP_011478977.1|641769_642666_-|sulfate-ABC-transporter-permease-subunit-CysW
MSTTVSQLAHYNAKVARSRATSEPTWVRWALIISSLLFLSLFLFIPLAAVFTEALRKGFDTYVAALVEPDAVSAIKLTLIAAAISLPLNLVFGIAAAWAIAKFEFKGKSILITLIDLPFAVSPVIAGLIYVLIFGLQGWFGEWLIDHDLKVIFALPGIVLATIFVTFPFIARELIPLMQAQGKEEEEAGLVLGASGWQILWHITLPNIKWGLLYGVILTNARAMGEFGAVSVVSGHIRGLTNTMPLHVEILYNEYNYAAAFAVASLLAFLALITLALKSYIEWQSSRSAIAREKASDQ
>NC_007947.1|WP_011478978.1|642679_643519_-|sulfate-ABC-transporter-permease-subunit-CysT
MAKKHKPHRVLPGFNLSLGYTLLYLSLIVLIPLSAAFIKTTELSFSEFWHTVTTPRVVASYKLTFGASLLAAIINAIFGLLTAWVLTRYTFPGKKLVDALVDLPFALPTAVAGIAFTAVYSTNGWIGSLLEPYGLKVAFTPLGVVVALTFIGLPFVVRTVQPVLEDMEAEAEEAAASLGANRWQTFHRIILPALWPALLTGFALAFARAIGEYGSVIFIAGNMPMISEITPLIIITKLEQYDYTGATAVAVVMLVISFLLLLTINGLQWWSSRRNSTSR
>NC_007947.1|WP_011478981.1|644536_645526_-|sulfate-ABC-transporter-substrate-binding-protein
MLNKILAVSLLVAASLAHAGTTLLNVSYDVTREFYKDFNPAFSQYWKQKTGESVTINQSHGGSSKQARSVADGLQADVISMNQSNDIDILFERGKLIPADWQKRLPHASSPTTSTTVFLVRKGNPKNIKDWEDLVQPGIGVVIPNPKTSGNGRYSYLAAWGAVIKKGGDEAKARDFVTKLFKNVPVLDAGGRGATTTFVQRGIGDVLLTFENEVFLIKKELGNHNFDVVYPSSSILAENPIALVDKVVDKRKTRQVAQAYLEFHYSQEGQEIAARHYLRPRSAEVLAAHQADFKPLQLFTVDELFGGWQKAQKTHFSDGGTFDQIYVNK
>NC_007947.1|WP_011478982.1|645881_646835_+|serine-acetyltransferase
MSQLRNNAELGDELGISQIVTSLREVRLTALEHRNRLNRPPKLPARKALAGVVEGLGAALFPNRLGLPDLREEGIDYFVGHTLDVALRELVAQVRLELSFIAELDQVEDLKVRATALVREFASQLPAIRHLLDSDIRAAYEGDPAARSVDEVLVCYPGINAITHYRIAHVLHQLGVPLIARMITEIAHSATGIDIHPGAQIGEGFFIDHGTGVVIGETSIIGRHVRLYQAVTLGAKRFPVDADGTLVKGNARHPIVEDDVVIYAGATILGRITIGRGSVIGGNVWLTYSVPPNSNITQAQMGEGAPAGPRNGTVTHQ
>NC_007947.1|WP_011478983.1|646893_647811_+|hypothetical-protein
MSDIHQGQTALGDVAARTLANATKTVPMLGSITPRWLVHLLQWVPVEAGIYRVNKVKDNHHVEVDCSNKDERELPATFVDYEEWGREYVLNAVNTVVDVHTRISDLYSSPHNQIREQLRLTIETVKERQESELINNKEYGLLHNIADGQKVKSRSGSPTPDDFDELISRVWKEPAFFLAHPQAIAAFGRECTRRGVPPPTVSLFGSQFITWRGIPIIPCDKLRVTKGKTNILLLRTGESRQGVVGLYQPNLPGQQSMGLSVRFMGINHKAIASYLVSLYCSLAVLTEDAIAVLENVDVGNYYDYK
>NC_007947.1|WP_011478984.1|647797_649663_+|cysteine-desulfurase
MTTSNIHDLSSFEPEAILAAFPGEHPRMAAAIVVGREAQASGHLDIDELTRIANEIYAEGFPHGAPELPSTASLTDSAVPYAAGSPGIGAPVPPVPSAVSALPAGAPAAANVVPGIELAQVTPPSLGVSPSRLPPEFSQERVEAVGPAPAFPGLDISSLLGGVDIPYPVDLQGLLTLPVNSLYPHGSGNPGAGNASPYYFVAERPGIPDVAASAHPPFDVSLVRKDFPILSELVNGRPLIWLDNAATTQKPQAVIDRLSYFYQHENSNIHRAAHELAARATDAYEGARETVRRFINAPAVENIVFVRGTTEAINLVAKTWGRKHLGEGDEVVVTHLEHHANIVPWQQLCQETGAKLKVVPVDDTGQVLLDEYQKLLTSRTKLVSFTQVSNALGTVTPAREMIAMAHAVGAKVLLDGAQSVSHMRTDVQSLDCDFLVFSGHKIFGPTGIGALYGKAEVLDDMPAWQGGGNMIQDVTFEKTVYHGAPAKFEAGTGNIADAVGMGAALEYVERLGIENIARYEHELLVYATAALNKVPGLRLIGTAQHKASVLSFNLQGYKSEEVGAALNQEGIAVRSGHHCAQPILRRFGVEATVRPSLAFYNTYAEVDVLQGVLSKLASAKR
>NC_007947.1|WP_011478985.1|649741_649957_-|transporter
MAIHAINVRNQFRGRVKEIVLGPVVSEIDVETPVGIVTSVITTRSVNELNLQVGTEVLALIKATEVSLAKV
>NC_007947.1|WP_011478986.1|649999_650359_-|DUF2325-domain-containing-protein
MSTALIVGGDQIEGIKQELSNFGVTHINHWSGRKVGDGKKVIPHDTDLIVLVTDWISHTFTHKIKQTAAKRGVRIVYTPNGPTALRTRLKQLNPDYVAEGECSEGIHANARRQDRLFLN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_007947_2	2.69\|637164\|33\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637164-637196	33	NC_007947.1	506464-506496	0	1.0

1. spacer 2.69|637164|33|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to position: 506464-506496, mismatch: 0, identity: 1.0

ctgcatggccgcttggacatggccgacttgccg	CRISPR spacer
ctgcatggccgcttggacatggccgacttgccg	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH649032	Microviridae sp. isolate ctbf007, complete genome	1726-1759	2	0.941
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH617083	Microviridae sp. isolate ctca675, complete genome	1774-1807	3	0.912
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH617758	Microviridae sp. isolate cteh020, complete genome	2157-2190	3	0.912
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH617760	Microviridae sp. isolate ctba734, complete genome	2105-2138	3	0.912
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH617100	Microviridae sp. isolate ctbd63, complete genome	1685-1718	3	0.912
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH617478	Microviridae sp. isolate ctic107, complete genome	1903-1936	3	0.912
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MG945487	UNVERIFIED: Microviridae sp. isolate 1128-1801, complete genome	3777-3810	3	0.912
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH572287	Microviridae sp. isolate SD_SC_46, complete genome	1676-1709	4	0.882
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MG945758	UNVERIFIED: Microviridae sp. isolate 3147-1711, complete genome	3880-3913	4	0.882
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MG945134	UNVERIFIED: Microviridae sp. isolate 156-1801, complete genome	3912-3945	4	0.882
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH622931	Microviridae sp. isolate ctbi780, complete genome	1823-1856	4	0.882
NC_007947_1	1.3\|175812\|32\|NC_007947\|CRISPRCasFinder	175812-175843	32	NZ_CP019366	Borrelia turicatae 91E135 isolate Oz1 plasmid lpF33.5, complete sequence	5064-5095	5	0.844
NC_007947_1	1.3\|175812\|32\|NC_007947\|CRISPRCasFinder	175812-175843	32	NZ_CP015636	Borrelia turicatae strain BTE5EL plasmid lp48	2817-2848	5	0.844
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH572307	Microviridae sp. isolate SD_SC_52, complete genome	1755-1788	5	0.853
NC_007947_1	1.1\|175814\|30\|NC_007947\|PILER-CR	175814-175843	30	NZ_CP019366	Borrelia turicatae 91E135 isolate Oz1 plasmid lpF33.5, complete sequence	5064-5093	6	0.8
NC_007947_1	1.1\|175814\|30\|NC_007947\|PILER-CR	175814-175843	30	NZ_CP015636	Borrelia turicatae strain BTE5EL plasmid lp48	2817-2846	6	0.8
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH572501	Microviridae sp. isolate SD_HF_34, complete genome	1770-1803	6	0.824
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH572493	Microviridae sp. isolate SD_HF_33, complete genome	1705-1738	6	0.824
NC_007947_2	2.2\|632689\|33\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	632689-632721	33	NZ_CP010724	Phaeobacter piscinae strain P18 plasmid pP18_i, complete sequence	534-566	7	0.788
NC_007947_2	2.34\|634825\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	634825-634858	34	MH059639	Dickeya phage Ninurta, complete genome	15817-15850	7	0.794
NC_007947_2	2.46\|635628\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	635628-635661	34	KC013022	Leuconostoc phage phiLN03, complete genome	26363-26396	7	0.794
NC_007947_2	2.61\|636632\|33\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636632-636664	33	MN329677	Gordonia phage Keitabear, complete genome	40241-40273	7	0.788
NC_007947_2	2.61\|636632\|33\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636632-636664	33	MH976507	Gordonia phage Ailee, complete genome	38610-38642	7	0.788
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MK496726	Capybara microvirus Cap1_SP_143, complete genome	2083-2116	7	0.794
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MG945333	UNVERIFIED: Microviridae sp. isolate 2135-1801, complete genome	3819-3852	7	0.794
NC_007947_2	2.8\|633087\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	633087-633120	34	MN694786	Marine virus AFVG_250M645, complete genome	36258-36291	8	0.765
NC_007947_2	2.30\|634558\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	634558-634591	34	NC_021776	Vibrio phage vpms1, complete genome	22642-22675	8	0.765
NC_007947_2	2.49\|635825\|36\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	635825-635860	36	MH617216	Microviridae sp. isolate ctcb794, complete genome	1164-1199	8	0.778
NC_007947_2	2.49\|635825\|36\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	635825-635860	36	MH616718	Microviridae sp. isolate ctda801, complete genome	1128-1163	8	0.778
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MH617731	Microviridae sp. isolate ctdb081, complete genome	1792-1825	8	0.765
NC_007947_2	2.80\|637893\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637893-637926	34	MG945571	UNVERIFIED: Microviridae sp. isolate 3515-1801, complete genome	3009-3042	8	0.765
NC_007947_2	2.82\|638025\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	638025-638058	34	MH669006	Streptomyces phage LibertyBell, complete genome	42758-42791	8	0.765
NC_007947_1	1.2\|175875\|30\|NC_007947\|PILER-CR	175875-175904	30	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	576851-576880	9	0.7
NC_007947_2	2.10\|633219\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	633219-633252	34	KT870145	Roseobacter phage DSS3P8, complete genome	69923-69956	9	0.735
NC_007947_2	2.10\|633219\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	633219-633252	34	MH015255	Ruegeria phage vB_RpoS-V10, complete genome	69971-70004	9	0.735
NC_007947_2	2.35\|634891\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	634891-634925	35	NC_013785	Zymomonas mobilis subsp. mobilis ZM4 plasmid pZZM402, complete sequence	30450-30484	9	0.743
NC_007947_2	2.35\|634891\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	634891-634925	35	NZ_CP003716	Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid pZM1402301, complete sequence	2258-2292	9	0.743
NC_007947_2	2.35\|634891\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	634891-634925	35	NZ_CP003710	Zymomonas mobilis subsp. mobilis NRRL B-12526 plasmid pZM1252601, complete sequence	22577-22611	9	0.743
NC_007947_2	2.49\|635825\|36\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	635825-635860	36	MH622913	Microviridae sp. isolate ctdb613, complete genome	1128-1163	9	0.75
NC_007947_2	2.60\|636567\|33\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636567-636599	33	NZ_CP050096	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence	187735-187767	9	0.727
NC_007947_2	2.60\|636567\|33\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636567-636599	33	NZ_CP050102	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence	168971-169003	9	0.727
NC_007947_2	2.60\|636567\|33\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636567-636599	33	NZ_CP050107	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence	206199-206231	9	0.727
NC_007947_2	2.60\|636567\|33\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636567-636599	33	NZ_CP050112	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence	206198-206230	9	0.727
NC_007947_2	2.81\|637959\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637959-637992	34	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1298637-1298670	9	0.735
NC_007947_2	2.81\|637959\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	637959-637992	34	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1458198-1458231	9	0.735
NC_007947_2	2.84\|638157\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	638157-638190	34	NZ_CP020372	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence	306504-306537	9	0.735
NC_007947_2	2.88\|638422\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	638422-638455	34	NZ_CP009293	Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence	75447-75480	9	0.735
NC_007947_2	2.93\|638755\|34\|NC_007947\|CRT	638755-638788	34	NC_007641	Rhodospirillum rubrum ATCC 11170 plasmid unnamed, complete sequence	7046-7079	9	0.735
NC_007947_2	2.49\|635825\|36\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	635825-635860	36	MK496800	Capybara microvirus Cap3_SP_468, complete genome	1128-1163	10	0.722
NC_007947_2	2.49\|635825\|36\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	635825-635860	36	MH572504	Microviridae sp. isolate SD_HF_58, complete genome	1113-1148	10	0.722
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	NC_031070	Bacillus phage Nemo, complete genome	50770-50804	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	KU737344	Bacillus phage Nigalana, complete genome	51087-51121	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	KJ489399	Bacillus phage Hakuna, complete genome	49049-49083	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	KX349902	Bacillus phage Kida, complete genome	49750-49784	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	KX156152	Bacillus phage Smudge, complete genome	50237-50271	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	MF288917	Bacillus phage PPIsBest, complete genome	50298-50332	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	MN038179	Bacillus phage ALPS, complete genome	49941-49975	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	KU737351	Bacillus phage NotTheCreek, complete genome	50098-50132	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	MH638311	Bacillus phage OmnioDeoPrimus, complete genome	50704-50738	10	0.714
NC_007947_2	2.62\|636697\|35\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	636697-636731	35	MF288918	Bacillus phage Bubs, complete genome	50799-50833	10	0.714
NC_007947_2	2.88\|638422\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	638422-638455	34	NC_022590	Brevibacterium sp. Ap13 plasmid pAP13, complete sequence	84707-84740	10	0.706
NC_007947_1	1.4\|175873\|32\|NC_007947\|CRISPRCasFinder	175873-175904	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	576849-576880	11	0.656
NC_007947_2	2.88\|638422\|34\|NC_007947\|PILER-CR,CRISPRCasFinder,CRT	638422-638455	34	NC_015378	Burkholderia gladioli BSR3 plasmid bgla_3p, complete sequence	31837-31870	11	0.676

1. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH649032 (Microviridae sp. isolate ctbf007, complete genome) position: , mismatch: 2, identity: 0.941

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aaatcagcaacttcacgttgatgagcagtatttg	Protospacer
************* ****************** *

2. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH617083 (Microviridae sp. isolate ctca675, complete genome) position: , mismatch: 3, identity: 0.912

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aaatcagcaacttcacgttgatgggcagtattag	Protospacer
************* *********.********.*

3. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH617758 (Microviridae sp. isolate cteh020, complete genome) position: , mismatch: 3, identity: 0.912

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aaatccgcaacttcacgttgatgagcagtattag	Protospacer
***** ******* ******************.*

4. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH617760 (Microviridae sp. isolate ctba734, complete genome) position: , mismatch: 3, identity: 0.912

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aaatcagcaacttcacgctgatgagcagtattag	Protospacer
************* ***.**************.*

5. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH617100 (Microviridae sp. isolate ctbd63, complete genome) position: , mismatch: 3, identity: 0.912

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
atatcagcaacctgacgttgatgagcagtattag	Protospacer
* *********.********************.*

6. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH617478 (Microviridae sp. isolate ctic107, complete genome) position: , mismatch: 3, identity: 0.912

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
agatcagcaacttcacgttgatgagcagtactgg	Protospacer
*.*********** ****************.***

7. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MG945487 (UNVERIFIED: Microviridae sp. isolate 1128-1801, complete genome) position: , mismatch: 3, identity: 0.912

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aaatcatcaacttcacgttgatgagcagtattag	Protospacer
****** ****** ******************.*

8. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH572287 (Microviridae sp. isolate SD_SC_46, complete genome) position: , mismatch: 4, identity: 0.882

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aaatcagcaacttcacgttgatgagcagtagaag	Protospacer
************* ****************  .*

9. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MG945758 (UNVERIFIED: Microviridae sp. isolate 3147-1711, complete genome) position: , mismatch: 4, identity: 0.882

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aaatcagcaacttcacgctgatgagcagtatcgc	Protospacer
************* ***.*************.*

10. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MG945134 (UNVERIFIED: Microviridae sp. isolate 156-1801, complete genome) position: , mismatch: 4, identity: 0.882

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
agatcagcgacttcacgttgatgagcagtattcg	Protospacer
*.******.**** ****************** *

11. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH622931 (Microviridae sp. isolate ctbi780, complete genome) position: , mismatch: 4, identity: 0.882

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
agatcagcgacttcacgttgatgagcagtatttg	Protospacer
*.******.**** ****************** *

12. spacer 1.3|175812|32|NC_007947|CRISPRCasFinder matches to NZ_CP019366 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpF33.5, complete sequence) position: , mismatch: 5, identity: 0.844

-gcatagagctaataagagtaacggcaatgtaa	CRISPR spacer
tgca-attgctaataagagtaacggaaatgtta	Protospacer
 *** *  ***************** ***** *

13. spacer 1.3|175812|32|NC_007947|CRISPRCasFinder matches to NZ_CP015636 (Borrelia turicatae strain BTE5EL plasmid lp48) position: , mismatch: 5, identity: 0.844

-gcatagagctaataagagtaacggcaatgtaa	CRISPR spacer
tgca-attgctaataagagtaacggaaatgtta	Protospacer
 *** *  ***************** ***** *

14. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH572307 (Microviridae sp. isolate SD_SC_52, complete genome) position: , mismatch: 5, identity: 0.853

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
agatcagccacttggcgttgatgagcagtactag	Protospacer
*.****** *****.***************.*.*

15. spacer 1.1|175814|30|NC_007947|PILER-CR matches to NZ_CP019366 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpF33.5, complete sequence) position: , mismatch: 6, identity: 0.8

atagagctaataagagtaacggcaatgtaa	CRISPR spacer
caattgctaataagagtaacggaaatgtta	Protospacer
  *  ***************** ***** *

16. spacer 1.1|175814|30|NC_007947|PILER-CR matches to NZ_CP015636 (Borrelia turicatae strain BTE5EL plasmid lp48) position: , mismatch: 6, identity: 0.8

atagagctaataagagtaacggcaatgtaa	CRISPR spacer
caattgctaataagagtaacggaaatgtta	Protospacer
  *  ***************** ***** *

17. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH572501 (Microviridae sp. isolate SD_HF_34, complete genome) position: , mismatch: 6, identity: 0.824

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
atatcagcaacttgacgttgatgtgcagtggaag	Protospacer
* ********************* *****.  .*

18. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH572493 (Microviridae sp. isolate SD_HF_33, complete genome) position: , mismatch: 6, identity: 0.824

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
agatccgtaacttgacgttgatgagcagtacggc	Protospacer
*.*** *.**********************. *

19. spacer 2.2|632689|33|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010724 (Phaeobacter piscinae strain P18 plasmid pP18_i, complete sequence) position: , mismatch: 7, identity: 0.788

atgaggtcgcggaaatcatccagggc--gccggtg	CRISPR spacer
aagagttcccggaaatcatccagggcaaaccgt--	Protospacer
* *** ** *****************  .***

20. spacer 2.34|634825|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH059639 (Dickeya phage Ninurta, complete genome) position: , mismatch: 7, identity: 0.794

cgcgcgttgctggcatgggtgcccgatgaggatc	CRISPR spacer
tttgcgttgatggcatgggtgcacgatgaggtgc	Protospacer
. .****** ************ ********  *

21. spacer 2.46|635628|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to KC013022 (Leuconostoc phage phiLN03, complete genome) position: , mismatch: 7, identity: 0.794

cgacaatcaataacatcacgggattagttagaag	CRISPR spacer
tgacaatcaataacatcattggattagtacaaac	Protospacer
.*****************. ********  .**

22. spacer 2.61|636632|33|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MN329677 (Gordonia phage Keitabear, complete genome) position: , mismatch: 7, identity: 0.788

gtgtcgccccatacatcaatgccttg-acgccaa	CRISPR spacer
cgatcgccccatagatgaatgccttgaacgcct-	Protospacer
  .********** ** ********* *****

23. spacer 2.61|636632|33|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH976507 (Gordonia phage Ailee, complete genome) position: , mismatch: 7, identity: 0.788

gtgtcgccccatacatcaatgccttg-acgccaa	CRISPR spacer
cgatcgccccatagatgaatgccttgaacgcct-	Protospacer
  .********** ** ********* *****

24. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MK496726 (Capybara microvirus Cap1_SP_143, complete genome) position: , mismatch: 7, identity: 0.794

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aggtctttaacttcacgttgatgagcagtattag	Protospacer
*..**  .***** ******************.*

25. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MG945333 (UNVERIFIED: Microviridae sp. isolate 2135-1801, complete genome) position: , mismatch: 7, identity: 0.794

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
agatctcgaacttctcgttgatgagcagtattcg	Protospacer
*.***   *****  ***************** *

26. spacer 2.8|633087|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MN694786 (Marine virus AFVG_250M645, complete genome) position: , mismatch: 8, identity: 0.765

tttgcgtaataggttctgctggaatagtgactcg--	CRISPR spacer
ctttcgtaataggttctgctggcat--tacctagtc	Protospacer
.** ****************** **  *. ** *

27. spacer 2.30|634558|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NC_021776 (Vibrio phage vpms1, complete genome) position: , mismatch: 8, identity: 0.765

aacgacaaagcagagagtgtcgctaagtttatcc	CRISPR spacer
agcgacaaagctgagagtgtagctaaagttgtag	Protospacer
*.********* ******** *****. **.*

28. spacer 2.49|635825|36|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH617216 (Microviridae sp. isolate ctcb794, complete genome) position: , mismatch: 8, identity: 0.778

cttcactgagcatggtatgattattggccttgcttc	CRISPR spacer
ttttactgagcatggcatgattattggtatggtttg	Protospacer
.**.***********.***********. * *.**

29. spacer 2.49|635825|36|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH616718 (Microviridae sp. isolate ctda801, complete genome) position: , mismatch: 8, identity: 0.778

cttcactgagcatggtatgattattggccttgcttc	CRISPR spacer
ttttactgagcatggtgtgattattggtatggtttg	Protospacer
.**.************.**********. * *.**

30. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH617731 (Microviridae sp. isolate ctdb081, complete genome) position: , mismatch: 8, identity: 0.765

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
aggtcagcaacttcacgttgatgggcagtggagc	Protospacer
*..********** *********.*****.  *

31. spacer 2.80|637893|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MG945571 (UNVERIFIED: Microviridae sp. isolate 3515-1801, complete genome) position: , mismatch: 8, identity: 0.765

aaatcagcaacttgacgttgatgagcagtattgg	CRISPR spacer
ttgtcttcagcttcacgttgatgagcagtattag	Protospacer
  .**  **.*** ******************.*

32. spacer 2.82|638025|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH669006 (Streptomyces phage LibertyBell, complete genome) position: , mismatch: 8, identity: 0.765

gagccgaccagcttgaggaaaccacccggaaact	CRISPR spacer
tcgacgaccaggtcgaggaaaccacccggcagat	Protospacer
  * ******* *.*************** *. *

33. spacer 1.2|175875|30|NC_007947|PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 9, identity: 0.7

tcattgggaccagagcggctttatggcgtg	CRISPR spacer
cacctgggtccagagcggctttctggcact	Protospacer
.  .**** ************* ****..

34. spacer 2.10|633219|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to KT870145 (Roseobacter phage DSS3P8, complete genome) position: , mismatch: 9, identity: 0.735

gtgcgacacccatccgccagactgcttgccgtca	CRISPR spacer
gcccgacaccctcccgccagactgcttcgccttt	Protospacer
*. ******** .**************  * *.

35. spacer 2.10|633219|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH015255 (Ruegeria phage vB_RpoS-V10, complete genome) position: , mismatch: 9, identity: 0.735

gtgcgacacccatccgccagactgcttgccgtca	CRISPR spacer
gcccgacaccctcccgccagactgcttcgccttt	Protospacer
*. ******** .**************  * *.

36. spacer 2.35|634891|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NC_013785 (Zymomonas mobilis subsp. mobilis ZM4 plasmid pZZM402, complete sequence) position: , mismatch: 9, identity: 0.743

gagtacatgatcttgatgttttgccgctcgcactc	CRISPR spacer
tggtacatgatcttgatctttttccgcaggcgttg	Protospacer
 .*************** **** ****  **..*

37. spacer 2.35|634891|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP003716 (Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid pZM1402301, complete sequence) position: , mismatch: 9, identity: 0.743

gagtacatgatcttgatgttttgccgctcgcactc	CRISPR spacer
tggtacatgatcttgatctttttccgcaggcgttg	Protospacer
 .*************** **** ****  **..*

38. spacer 2.35|634891|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP003710 (Zymomonas mobilis subsp. mobilis NRRL B-12526 plasmid pZM1252601, complete sequence) position: , mismatch: 9, identity: 0.743

gagtacatgatcttgatgttttgccgctcgcactc	CRISPR spacer
tggtacatgatcttgatctttttccgcaggcgttg	Protospacer
 .*************** **** ****  **..*

39. spacer 2.49|635825|36|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH622913 (Microviridae sp. isolate ctdb613, complete genome) position: , mismatch: 9, identity: 0.75

cttcactgagcatggtatgattattggccttgcttc	CRISPR spacer
gtttactgagcatggtatgattattggtatcgtgaa	Protospacer
 **.***********************. *.*.

40. spacer 2.60|636567|33|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 9, identity: 0.727

gtcgtcatcacgcagtttccgcacctggtgcat	CRISPR spacer
atgctcatcacgcagtttccggacatggcgacg	Protospacer
.*  ***************** ** ***.*

41. spacer 2.60|636567|33|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 9, identity: 0.727

gtcgtcatcacgcagtttccgcacctggtgcat	CRISPR spacer
atgctcatcacgcagtttccggacatggcgacg	Protospacer
.*  ***************** ** ***.*

42. spacer 2.60|636567|33|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 9, identity: 0.727

gtcgtcatcacgcagtttccgcacctggtgcat	CRISPR spacer
atgctcatcacgcagtttccggacatggcgacg	Protospacer
.*  ***************** ** ***.*

43. spacer 2.60|636567|33|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 9, identity: 0.727

gtcgtcatcacgcagtttccgcacctggtgcat	CRISPR spacer
atgctcatcacgcagtttccggacatggcgacg	Protospacer
.*  ***************** ** ***.*

44. spacer 2.81|637959|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 9, identity: 0.735

ccttgctgcggcagcagccgaacaa----acgccgcct	CRISPR spacer
acttgcttcggcagcagccgaataaggagacgat----	Protospacer
 ****** **************.**    *** .

45. spacer 2.81|637959|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 9, identity: 0.735

ccttgctgcggcagcagccgaacaa----acgccgcct	CRISPR spacer
acttgcttcggcagcagccgaataaggagacgat----	Protospacer
 ****** **************.**    *** .

46. spacer 2.84|638157|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020372 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence) position: , mismatch: 9, identity: 0.735

tctggatggcctcgaatccgttgtaatcagtctc	CRISPR spacer
tctggatcgcctcgaagccgttgtagtgatcgat	Protospacer
******* ******** ********.* * .  .

47. spacer 2.88|638422|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 9, identity: 0.735

caccgcgatgatgagcgtttcctgcgctggttgc	CRISPR spacer
cgccgcgatgatgagcgtcccctgcgcggagacg	Protospacer
*.****************..******* *.

48. spacer 2.93|638755|34|NC_007947|CRT matches to NC_007641 (Rhodospirillum rubrum ATCC 11170 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ggttgcctggctgaatggatagaaaggggacatt	CRISPR spacer
gatcctctggctgattggatagaacggggatctc	Protospacer
*.*. .******** ********* *****. *.

49. spacer 2.49|635825|36|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MK496800 (Capybara microvirus Cap3_SP_468, complete genome) position: , mismatch: 10, identity: 0.722

cttcactgagcatggtatgattattggccttgcttc	CRISPR spacer
ttctgtagagcatggtatgatcattggtcttgctgt	Protospacer
.*.... **************.*****.****** .

50. spacer 2.49|635825|36|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH572504 (Microviridae sp. isolate SD_HF_58, complete genome) position: , mismatch: 10, identity: 0.722

cttcactgagcatggtatgattattggccttgcttc	CRISPR spacer
ttttactgagcatggtattattattggattatgtag	Protospacer
.**.************** ******** .*   *

51. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NC_031070 (Bacillus phage Nemo, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgtcaaa	Protospacer
.*.  *** ****** **************    *

52. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to KU737344 (Bacillus phage Nigalana, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgttaaa	Protospacer
.*.  *** ****** **************    *

53. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to KJ489399 (Bacillus phage Hakuna, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgttaaa	Protospacer
.*.  *** ****** **************    *

54. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to KX349902 (Bacillus phage Kida, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgttaaa	Protospacer
.*.  *** ****** **************    *

55. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to KX156152 (Bacillus phage Smudge, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgttaaa	Protospacer
.*.  *** ****** **************    *

56. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MF288917 (Bacillus phage PPIsBest, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgttaaa	Protospacer
.*.  *** ****** **************    *

57. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MN038179 (Bacillus phage ALPS, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgttaaa	Protospacer
.*.  *** ****** **************    *

58. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to KU737351 (Bacillus phage NotTheCreek, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgttaaa	Protospacer
.*.  *** ****** **************    *

59. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MH638311 (Bacillus phage OmnioDeoPrimus, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgttaaa	Protospacer
.*.  *** ****** **************    *

60. spacer 2.62|636697|35|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to MF288918 (Bacillus phage Bubs, complete genome) position: , mismatch: 10, identity: 0.714

ttgttgctcctggtcgtggtgccgatgatgggcta	CRISPR spacer
ctagagctactggtcttggtgccgatgatgtcaaa	Protospacer
.*.  *** ****** **************    *

61. spacer 2.88|638422|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NC_022590 (Brevibacterium sp. Ap13 plasmid pAP13, complete sequence) position: , mismatch: 10, identity: 0.706

caccgcgatgatgagcgtttcctgcgctggttgc	CRISPR spacer
ctgggcgatgatgatcgtttccagcgcttcgatc	Protospacer
*   ********** ******* *****     *

62. spacer 1.4|175873|32|NC_007947|CRISPRCasFinder matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 11, identity: 0.656

gctcattgggaccagagcggctttatggcgtg	CRISPR spacer
agcacctgggtccagagcggctttctggcact	Protospacer
. .  .**** ************* ****..

63. spacer 2.88|638422|34|NC_007947|PILER-CR,CRISPRCasFinder,CRT matches to NC_015378 (Burkholderia gladioli BSR3 plasmid bgla_3p, complete sequence) position: , mismatch: 11, identity: 0.676

caccgcgatgatgagcgtttcctgcgctggttgc	CRISPR spacer
gtgcgcgatcatgagcgcttcctgcgcctcgatc	Protospacer
   ****** *******.*********.     *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2140679 : 2151184

Escherichia_phage(42.86%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011480224.1\|2140679_2142587_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.1e-129	38.4
WP_011480225.1\|2142805_2143864_-	TIGR03790 family protein	NA	NA	NA	NA
WP_011480226.1\|2143934_2144381_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_048811682.1\|2144385_2144826_-	hypothetical protein	NA	NA	NA	NA
WP_011480228.1\|2145040_2146045_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	2.0e-83	47.1
WP_011480229.1\|2146246_2147347_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	8.1e-86	47.2
WP_011480230.1\|2147343_2148222_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.9e-98	59.9
WP_011480231.1\|2148221_2148770_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.0e-53	54.7
WP_011480232.1\|2148769_2149690_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.9e-28	32.6
WP_011480233.1\|2149744_2151184_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	7.4e-47	29.0

DBSCAN-SWA_2

2479187 : 2487386

Vibrio_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048811725.1\|2479187_2481110_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	7.4e-34	33.1
WP_011480543.1\|2481209_2482940_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	7.3e-65	38.9
WP_011480544.1\|2483027_2483474_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	1.4e-25	48.6
WP_011480545.1\|2483492_2483705_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_011480546.1\|2483791_2484811_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.5e-98	52.5
WP_011480547.1\|2484829_2485420_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_011480548.1\|2485489_2485864_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_048811726.1\|2486017_2486911_-	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	8.4e-33	30.6
WP_048811727.1\|2486897_2487386_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A2P1EL10	Moumouvirus	4.3e-15	31.6

DBSCAN-SWA_3

2897101 : 2906722

Achromobacter_phage(33.33%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011480901.1\|2897101_2900617_-\|tail	Phage-related protein tail component-like protein	A5A3R1	Burkholderia_phage	7.2e-128	33.2
WP_011480902.1\|2900613_2901015_-	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.6e-15	38.9
WP_011480903.1\|2901011_2901554_-	DUF1833 domain-containing protein	A0A0B5A6M7	Achromobacter_phage	4.8e-31	42.5
WP_048811772.1\|2901563_2901878_-	hypothetical protein	NA	NA	NA	NA
WP_011480905.1\|2901961_2905132_-	tape measure protein	A0A0M5MTI3	Ralstonia_phage	3.6e-46	51.2
WP_011480906.1\|2905243_2905549_-	DUF1799 domain-containing protein	D6PFD7	uncultured_phage	1.1e-05	39.7
WP_011480907.1\|2905551_2905893_-	hypothetical protein	NA	NA	NA	NA
WP_011480908.1\|2905960_2906722_-	hypothetical protein	A0A2D2W2E0	Stenotrophomonas_phage	2.0e-38	38.0

DBSCAN-SWA_4

2915092 : 2932887

Burkholderia_phage(27.78%)

lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011480917.1\|2915092_2916880_-	Mu-like prophage FluMu protein gp28-like	Q6QIC1	Burkholderia_phage	4.8e-96	43.0
WP_011480918.1\|2916882_2917440_-	DUF3486 family protein	Q6QIC2	Burkholderia_phage	1.8e-41	51.4
WP_011480919.1\|2917432_2917741_-	hypothetical protein	NA	NA	NA	NA
WP_011480920.1\|2917737_2918073_-	DUF2730 family protein	NA	NA	NA	NA
WP_011480921.1\|2918060_2918279_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
WP_048811773.1\|2918275_2918809_-\|lysis	lysis protein	NA	NA	NA	NA
WP_048811774.1\|2918801_2919056_-	hypothetical protein	NA	NA	NA	NA
WP_011480923.1\|2919052_2919607_-	N-acetylmuramoyl-L-alanine amidase	F6MIJ9	Haemophilus_phage	2.7e-37	44.2
WP_011480924.1\|2919659_2920220_-	hypothetical protein	Q6QID0	Burkholderia_phage	6.3e-18	31.6
WP_048811775.1\|2920476_2920797_-	hypothetical protein	NA	NA	NA	NA
WP_011480925.1\|2920799_2921687_-	hypothetical protein	NA	NA	NA	NA
WP_048811776.1\|2921730_2922075_-	helix-turn-helix transcriptional regulator	K4NXA8	Burkholderia_phage	4.4e-14	46.4
WP_011480927.1\|2922204_2922396_+	DNA-binding protein	A4JWN7	Burkholderia_virus	9.2e-22	86.0
WP_048811777.1\|2922392_2922611_+	hypothetical protein	NA	NA	NA	NA
WP_048811778.1\|2922635_2922983_+	hypothetical protein	NA	NA	NA	NA
WP_011480929.1\|2922985_2923471_+	hypothetical protein	A4JWN5	Burkholderia_virus	3.1e-37	45.4
WP_011480930.1\|2923474_2923789_+	hypothetical protein	J9SUN0	Pseudomonas_phage	9.9e-13	40.4
WP_011480931.1\|2923803_2924775_+	hypothetical protein	J9RW58	Pseudomonas_phage	8.3e-50	54.9
WP_011480932.1\|2924774_2926559_+	hypothetical protein	Q5ZR04	Pseudomonas_phage	4.4e-73	33.0
WP_048812021.1\|2927098_2927953_+	AAA family ATPase	A4JWN1	Burkholderia_virus	1.5e-63	49.0
WP_048811779.1\|2927962_2928142_+	hypothetical protein	NA	NA	NA	NA
WP_011480934.1\|2928128_2928410_+	hypothetical protein	NA	NA	NA	NA
WP_011480935.1\|2928399_2928708_+	hypothetical protein	NA	NA	NA	NA
WP_011480936.1\|2928710_2929217_+	hypothetical protein	A0A2H4JFV8	uncultured_Caudovirales_phage	2.1e-28	51.2
WP_011480937.1\|2929213_2929831_+	DUF3164 family protein	J9STG3	Pseudomonas_phage	2.2e-64	60.2
WP_048811780.1\|2929827_2930061_+	hypothetical protein	NA	NA	NA	NA
WP_048811781.1\|2930304_2930643_+	hypothetical protein	F8TVM9	EBPR_siphovirus	1.2e-08	34.3
WP_011480940.1\|2930672_2930945_+	HU family DNA-binding protein	F8TVE1	EBPR_siphovirus	3.1e-07	43.9
WP_011480941.1\|2931144_2931378_+	hypothetical protein	NA	NA	NA	NA
WP_011480942.1\|2931374_2931800_+	hypothetical protein	A0A0K1LN87	Citrobacter_phage	9.3e-14	39.6
WP_011480943.1\|2931788_2932082_-	hypothetical protein	NA	NA	NA	NA
WP_011480944.1\|2932103_2932538_+	regulatory protein GemA	A0A2H4J581	uncultured_Caudovirales_phage	1.5e-11	38.8
WP_011480945.1\|2932539_2932887_+	hypothetical protein	Q6QIE8	Burkholderia_phage	2.8e-16	53.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_007947

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection