CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_008009	Candidatus Koribacter versatilis Ellin345, complete sequence	3 crisprs	cas3,PD-DExK,csa3,DinG,Cas9_archaeal,WYL	0	1	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_008009_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008009_1

50609-50720

Orphan

Consensus_repeat	Method
GATTCTTGGTTTGTATCAGGGCACGACTTCAGTCGTGCCGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008009_1

>merge|NC_008009|1|50609-50720|CRISPRCasFinder
GATTCTTGGTTTGTATCAGGGCACGACTTCAGTCGTGCCGATTCGCAGATGCCGCCGATAATTCGGTCGCGATTCTTGGTTTGTATCAGGGCACGACTTCGGTCGTGCCGAT

>NC_008009|1|1|50609-50720|CRISPRCasFinder
GATTCTTGGTTTGTATCAGGGCACGACTTCAGTCGTGCCGAT	TCGCAGATGCCGCCGATAATTCGGTCGC
GATTCTTGGTTTGTATCAGGGCACGACTTCGGTCGTGCCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_008009.1\|WP_011520864.1\|55119_56361_-\|UvrB/UvrC-motif-containing-protein	unknown	unknown	gnl\|CDD\|223399
NC_008009.1\|WP_011520852.1\|40784_41849_-\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NC_008009.1\|WP_011520861.1\|51555_51909_-\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NC_008009.1\|WP_041855300.1\|46846_47590_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011520868.1\|59075_59360_+\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011520865.1\|56938_57220_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011520850.1\|39494_40175_+\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011520851.1\|40289_40745_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379209
NC_008009.1\|WP_011520860.1\|51199_51559_-\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NC_008009.1\|WP_011520859.1\|50852_51200_-\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NC_008009.1\|WP_011520866.1\|57237_58062_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_187148912.1\|48025_48919_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200583
NC_008009.1\|WP_011520867.1\|58071_58854_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236153
NC_008009.1\|WP_148210256.1\|43955_46487_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273429
NC_008009.1\|WP_011520863.1\|52836_55080_-\|DPP-IV-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|366374
NC_008009.1\|WP_187148911.1\|43640_43796_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_148209965.1\|47594_48005_-\|DUF971-domain-containing-protein	unknown	unknown	gnl\|CDD\|377616
NC_008009.1\|WP_011520858.1\|49042_50599_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NC_008009.1\|WP_011520862.1\|51929_52826_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|187553
NC_008009.1\|WP_041855299.1\|41853_43407_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987

Protein	Function_ID	Function_description	E-value
NC_008009.1\|WP_011520864.1\|55119_56361_-\|UvrB/UvrC-motif-containing-protein	gnl\|CDD\|223399	COG0322, UvrC, Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair].	3.50945e-27
NC_008009.1\|WP_011520852.1\|40784_41849_-\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	7.33139e-130
NC_008009.1\|WP_011520858.1\|49042_50599_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NC_008009.1\|WP_148209965.1\|47594_48005_-\|DUF971-domain-containing-protein	gnl\|CDD\|377616	pfam06155, DUF971, Protein of unknown function (DUF971). This family consists of several short bacterial proteins and one sequence from Oryza sativa. The function of this family is unknown.	1.77703e-31
NC_008009.1\|WP_011520863.1\|52836_55080_-\|DPP-IV-N-terminal-domain-containing-protein	gnl\|CDD\|366374	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region. This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry.	8.96419e-90
NC_008009.1\|WP_011520851.1\|40289_40745_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379209	pfam13474, SnoaL_3, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	5.77315e-10
NC_008009.1\|WP_011520860.1\|51199_51559_-\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	2.30961e-11
NC_008009.1\|WP_011520859.1\|50852_51200_-\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	1.239e-08
NC_008009.1\|WP_187148912.1\|48025_48919_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200583	cd10960, CE4_NodB_like_1, Catalytic NodB homology domain of uncharacterized bacterial polysaccharide deacetylases. This family includes many uncharacterized bacterial polysaccharide deacetylases. Although their biological function still remains unknown, members in this family show high sequence homology to the catalytic NodB homology domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), which is an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Like SpPgdA, this family is a member of the carbohydrate esterase 4 (CE4) superfamily.	3.74975e-101
NC_008009.1\|WP_148210256.1\|43955_46487_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_008009.1\|WP_011520867.1\|58071_58854_-\|ATP-binding-protein	gnl\|CDD\|236153	PRK08116, PRK08116, hypothetical protein; Validated.	1.81192e-33
NC_008009.1\|WP_011520861.1\|51555_51909_-\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	1.80894e-09
NC_008009.1\|WP_011520862.1\|51929_52826_-\|TIGR01777-family-protein	gnl\|CDD\|187553	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8. This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.84351e-130
NC_008009.1\|WP_041855299.1\|41853_43407_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	3.45363e-123

>NC_008009.1|WP_011520858.1|49042_50599_+|glutamate--tRNA-ligase
MSDKKVRARFAPSPTGQLHVGNARTALFNWLFARQQGGTMILRIEDTDLERSEARYEQQLLDDLKWMGINWDEGPDVGGPFPPYRQSDKIDVYREHAERLVAEGKAYYCFCSQADLDAYREQALKDHRPPIYPGTCRSVDPAEAKRRRDSGEAGAIRLRIPERPIRFHDIVHGDVEFSNEVVSDPIILRSSGVPVYNYVVVVDDAEMQITHVIRGDDHLSNTPKQVALYEALGWAVPEFAHLSTILGPDRERLSKRHGATSIATFREMGVLPEALVNYIALLGWAPTGGTREIFRPEELVKEFDLRRVTPSPAIFDFEKLYWLNRHYIKEAATYRIAKLARHYWDRMMIDKIAHRVGMPKLDPIHVAQWGASNEVDEWLSKVTALVVPSVNKLDELPERGKVFFDYDAAAALANPDNAEVLAAPKTTDVLAAFTTRIANESAPLTAERFKAIVNEVKTETGVKGKDLFHPIRIAVTGTHSGPEFDKLVPLIEEGASLNLPIAVKSVKERVAEFASARN
>NC_008009.1|WP_187148912.1|48025_48919_-|polysaccharide-deacetylase-family-protein
MACAAAGDAFAEERARQIAFTFDDPKTDSGPGLTWQQVNDNLLAALDKANVKAALFVTGMRVDSEDGRKLVAKWNDAGHLIGSHSYSHLFFDSKKVTLAGFEADLLKNEPLVERYSQFQKLFRFPFFKEGNTKEKRDGMRAFLKEHGYRIGRATVDASDWAIDGRMRKRYEKDAKADLRPYRDFYLQHIWDRAQYYDSLAQRVLGRSPAHTVLLHHSPMNAMFLPDLIAQFKGKGWEPVDAAKAFADPVYDRQPDILPCGESLIWALAKETGKFDAELRYPGEDDVYENPKMDALGL
>NC_008009.1|WP_148209965.1|47594_48005_-|DUF971-domain-containing-protein
MSADPKSVKVHKTEGTGMEIEWKDGHRSAYTFPWLRDACPCALCIEEREKEGRKPGDPLKAIAGALPMFKALARPTEAEAVGKYAIRFTWNDGHQHGIYSWEYLRENCTCPECKMKRDAAAVAQGEAVDEGEGKPN
>NC_008009.1|WP_041855300.1|46846_47590_-|hypothetical-protein
MKRWFAVALAICALLAMGEAQEKVQETASFNPAKYPRNLYIVTRREFPLESASVRVIQARARNFVGAPADCNAFIEVRRDEAVVTRLSFLAIDPGGFSFGLFLPLRQPIPDALVIMKEGDYDGRMIVISGDGKVANLPGGLYFQTEDKRYLIGLHMRDDTGLAVVDVATRSMVLDEKALKDSGEIGEFYKDERGYFFTFHTEPPRDEFLRLDLEHRRLVKDSSAALRSARKVEWDFTPGEMVDCTTK
>NC_008009.1|WP_148210256.1|43955_46487_-|UvrD-helicase-domain-containing-protein
MNPQQREAVETVHGPVLILAGAGSGKTRVITYRIAYLIEKVGVSPDSILAMTFTNKAAAEMQERVEHLVGGRTLAKPVISTFHSFCVRVLRRDIEALQINGKGYRKDFAIYDESDQQSLVKSAMKRLGIDDKQLTVRNVLSRISHAKNHLLDPQEVYLQSGDPKVERIAQIYKVYESELAKANALDFDDLLLMTNKLLKTSTEVRERYNRRFQYVLIDEYQDTNRPQYEIMRALAGTLHNVCAVGDEDQSIYSWRGADIRNILEFEQDFPEAKIVRLEQNYRSTQNILEAASAVVKNNLKRKGKNLWTERMGGAKVGYYEAPDGENESLFVADYINKYLMIAHDEDDEPKRAAVLYRTNSQSRLFEEAMRRYGIKYNVVGGFSFYERAEIKDMISYLKLIQNPSDSVALLRTINTPTRGIGKTTVEQIERIALETNLPLWDALGHIVEQRLMQPRACAALKGFRELIQDARAMLYGKFEERLVETAQVSKPEESDAAEPEIADEDLQDNMAFDFGELEPDAEEFSPEALGTAEEAAPEKVEGFRSPGENANVSEVLKFLIDRTGYIKQLEAEDTPESLARIENLRELVNAAMDSRDRGETIADFLDHAALVADTDDIEAGAQVTLMTMHAAKGLEFPLVFIVGMEEGLFPSSRTLMNPDEVEEERRLCYVGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVPPQLFEDIGSPQKKTPVFGDDSYSTHYDYENEDQRPQYGRTKQKTSYGGGSTYNSIDNIAEFFASRGKKFNRPSVPMEEPHGKRGFRPGQKVKHPKYGEGTVYQREGEGEEAKITVQFPRFGLKKLVEKFAQLEKA
>NC_008009.1|WP_187148911.1|43640_43796_-|hypothetical-protein
MANTKKITDKDERKKVKRAARKKAAPKAKRTYIRGEKKRKVKKLVRGTSKR
>NC_008009.1|WP_041855299.1|41853_43407_-|amino-acid-permease
MANQLLACKSIDKLISDSEAPEHQLKKTLGPWSLTALGIGAVIGSGIFTVIGTAIAGQKFDTSSILNAPLLDYIIHHTATTGRPGAGPALALSLVLVALVCAFTALCYAELASMIPIAGSAYTYTYATMGELIAWIIGWDLILEYAVSNMAVSVGFAAHLVDAFDWFGWHPNPRWISPAYLPSGLTDLQGGTIYNTGWHFGFNIPAFLIVMLLTVVLVRGIRESAETNNIMVLLKIGAILAFVVAGMKYIHPTNYHPFAPQGWPGVLTGGSIIFFTYIGFDSVSTAAEEAKNPQRDLPIGIIATLVICTVLYIAVAVVLTGIVKWDTLIDDAAPVVNSLKKLGLMSHSKGLHWTRLVVLFGAMMGMISSLLVFQLGQARVWFAMSRDGLLPKLFGRVHPKFRTPSTATWIAGVLVGIPAGILDIGTLADLSNIGTLFAFVLVSLGVIILRFKQPERRRGFRAPGGLTAPILSVVFCILLMSGLPILTWLRFFAWLIIGMSVYWLYSRHRSEFAPVRK
>NC_008009.1|WP_011520852.1|40784_41849_-|adenosine-deaminase
MNSSTGSEKLSGPSSFIRSLPKAELHLHLEGTVDPATLAELSRRHPTTLPVLNNRYSDVSDSGRVLSEDDARAIYRYKDFIGFLMAFKAVTERLRDPDDYELITYRMCEELAREGCVYAEPYVSVGVIYWRGGEFDHLFDGMERGRERGERDFGVKINWIFDAVRHFGPDEGWKVVEKAIQLRERNVVGIGIGGDEAGGPAENFREIYENAAKNGLHLTAHAGESTGPESIWSAMNDLKAERIGHGLHAIEDPELVEHLAKSGTAIEVCVSSNVRTGCCRALAEHPVRKLFDAGVKITIATDDPEMFGCTLTGEYQILQDQFGFSDDDLRRVARNSFEASFLPETEKQKYLAAI
>NC_008009.1|WP_011520851.1|40289_40745_+|nuclear-transport-factor-2-family-protein
MKSIRVAVCLAVIFLIFAASGRAQSAPDKAYLQKIWDGWQTLNADNQTQYYAQGPHQFFDIAPVKYNNWDEYKKTVGEDLAQYSKATFKINDDAQIHKAGDIYWGSCTIDSDMLRKDGKSEKNTFRWTFIFQKQNGKWLIVHEHVSMAMPS
>NC_008009.1|WP_011520850.1|39494_40175_+|hypothetical-protein
MSEKITGKCVTASGLPLEIELEWPFRAASFGSDWYVLHGSARLDDASGLHADIAVHLTASIREILTAIDSQEALMASINTVRKAVDDKQLELLKTGKRQPCPLSSRQYSIKNKHWWFLEANDEQLKAFVKRKVYWLGVVNGSGSVEVSDAVDQAYLGAKDKNIAYRLREAAKALAGEGYLALDAAGEHASPTDMLRAEAPKMQAEKDAALDALMAKHAYESAHNRA
>NC_008009.1|WP_011520859.1|50852_51200_-|carboxypeptidase-regulatory-like-domain-containing-protein
MRWIVLMTMLFATLIAFAQQPVKIDHSLKRIQGVVQRENGEPIPNIDVEVYGGRSLVAATKTDSKGKFKADSLEPGEYEVWFLYKPRPVFHDAEYNVTVDAKGPKDAWVVVLKPL
>NC_008009.1|WP_011520860.1|51199_51559_-|carboxypeptidase-regulatory-like-domain-containing-protein
MKTLLVGLMLMAGCASVWAQSDVVEVKQVQHLRGINGIVRDAKGQPLPGALIALRLQGSSTVMATTSSHLDGHFVMRLLAPGLYDMDVREAGFKKALYHLKVDDQGTKELLIVTMQAAK
>NC_008009.1|WP_011520861.1|51555_51909_-|carboxypeptidase-regulatory-like-domain-containing-protein
MNRQVAALCVLFLTLLVPAFAEEQLAVHVNEMRVPQILGVVQNHKGEPVTGVTVEVIRRENGHTVGEAKTDAQGRFAFPAVKNGRFNIKVHHNGIADFYHVRVTEEHASPELVLKYK
>NC_008009.1|WP_011520862.1|51929_52826_-|TIGR01777-family-protein
MNVFVTGSTGLIGRAVSARLRSEGHTVTPLVRGTPKAREVQWSPGKTLDPAVLASADAVIHLAGKNVATRWTPEEKKELYESRVAGTKTISDAVAEAFRRTGKPTVLISASAIGYYGNRGDEVLTEESAPGSGFLHDICVAWEGAAQSAKDAGVRVVHPRIGVVLSKDGGALAQMLPIFKLGAGGRLSGGRQWWSWISIHDIVGAMMFALNNVQVSGPVNFTGPYPVTNAAFTKVLGMVLHRPTLFPVPRFALHIAMGKEAAEETALGSLRVLPKRLLDYGYQFQHADLREALHNVVN
>NC_008009.1|WP_011520863.1|52836_55080_-|DPP-IV-N-terminal-domain-containing-protein
MKAHLATFLLFTSSFTLVSAQEAPKPKQLTIEAIFAKGGVLGRAPESVEWSPDGTKVSFVQRDDSGDNGALYYVDVTTGAKPAVLVAQEKLTEMKPPAKTKSDDREKDNRERYSVAAYHWAPDSKHILFDSGGALWNYDLAAGKSAMIASAEGGLGDPKFSPSGDRISYLREHDLYVSGLDGKAKRITEGGNANVLNGEVDWVYAEELNVRSNYFWSPNGKQIVYLQMDQTKVPTYPITDYIPTQATVDEEKFPKPGDPNPSVKLGVVSATGGKTKWIELPATDAYISRFGWVHDGLLYAFVLNRPQNKLDLYLVDAKSGRTQVAMTETSPSWIETNDEYKFIANGEKLLWTSWRDGHTHIYLYDLDKSNALAPLKLERQLTRGDWDVVSIDGVNEKTGIVYYSSDQEDERQRQEYRVNLADGVSEKITKDHGTHEAKFAPEANWFVDNYSALTTPPALAVCTLKDECTTFWSGRSVKDYALLVPQFVDAKADDGTVMHGVLLMPTEGVAMVNGKVPLITNPYGGPGVPGDWDSWGSVDLFDQYMAKRGYAILKMENRGMAGRGEKFAAPIMHHMCELPLKDQLASVEQVLKQFPQLDRARLGWWGWSYGGTMTAWALEHSDWFKVGVSVAPVTDWRNYDSIYTERYMGMPKEQAADYDRTSVVLNAKQIHGRLLVVHGTSDDNVHMQNSMQFMYALINHGVPFDVQIYPRKTHSISGEETRVHLFHRIQRQFDDVLMPKTAASSTP
>NC_008009.1|WP_011520864.1|55119_56361_-|UvrB/UvrC-motif-containing-protein
MLRSSLQFEPAHDAEFFAAAPAKAAVFLLRGAEGTEPYVSKTSNLRRRMVRLLGAPEERTKRLNLRDRVQGLEYSLVASDFEAQFCLYRTLREIFPSTYTDRLKLRFAPLVRLILENEYPRVAVTTRIQSLKSKSAYYGPFASRVAAEKFSNDALDFFLLRRCTDDLNPDPAFPGCIYSEMKMCLAPCFKGCTDERYAAETASVREFFESGGRSLLRQIEIDRNIASENLEFEKAAELHTKIEKLKAVTQQASELVRNIERLDGVMVQPSQEAESVSLLKISGGFLHDPVPFNVTPRLQVGQVKTPQSMEARLSEALAAVPVQKPASAYEWMEHLALLKRWYYRTSKTGEIFLTDDKGELPYRRLVRGVSRVYKGEKPQADLSETAGDYWRFRAAEGGVPDRPSEARGGLGEK
>NC_008009.1|WP_011520865.1|56938_57220_-|hypothetical-protein
MKLPTPERSAQAGIILLFVVIIRSLAEYFRLEHAYGYAIPRQILSEYVGGALIAVVATGICVMFFFARRYRSVVVLVVVTIVALLVYKVRYIL
>NC_008009.1|WP_011520866.1|57237_58062_-|hypothetical-protein
MKKKVFLDTQILEYAATGNISKREWDHVTRYLQCEYRYYISLHTLYELLVGLALGSNDYFSHNQKRLKVLFSLGARRYLGLAGDFVRVHAFGLPGRIHHFDPEHLRIWARVIVGARDRWQLEREGVGLGTRAYGIKLDEVVSQVDRGKAQHVKSLEELRDGVSKRSNQEIWSTSLLNLIEVPATPENVTRILNATDAAFWYSSALYDLAKARNYNFDERDSDWLDYHQLLYLADPTVHFVTAEVKLPARIKKSVQRDRVLVWKDLISIAAKRGF
>NC_008009.1|WP_011520867.1|58071_58854_-|ATP-binding-protein
MIETTVKCEVCRDTGWKTVADEKGPRAVRCDCQQRLRNDRLLQHAYIPDRYKHCELSNFEHDGPFQTLSPAHLAASQFVEKYPVERAGLLLIGTIGVGKTHLAVGIIRELMMAKGVPCLFYDYRELLKEIQNSYNNSVAVTELDVLRPVFEAEVLVLDELGAVKPTEWVWDTVSHILNTRYNDRRTTIITTNYRDLPPGGAANGDEPPRRTYGAAERAAREETLGDRIGERMRSRLHEMCRIVTVQGEDFRIKWKSASWR
>NC_008009.1|WP_011520868.1|59075_59360_+|hypothetical-protein
MQSAVNPELPVAGALWSGVAAFFAFLGTAGACIAIVLIVSVGLGRDEGGVWLPMRYAAIWVPITALVAVSVAVVTFRRVARRFTHVAAEIFDRQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_008009_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008009_2

3525930-3526045

Orphan

Consensus_repeat	Method
AACAGCAGATCCTTCGCTGCGCTCTGGATGACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008009_2

>merge|NC_008009|2|3525930-3526045|CRISPRCasFinder
AACAGCAGATCCTTCGCTGCGCTCTGGATGACAAGAGGGGGTAGTGGGAGTGCGAGCGACCGTGTGGGCTGGCCGCTCGGCTCAACAGCAGATCCTTCGCTGCGCTCAGGATGACA

>NC_008009|2|2|3525930-3526045|CRISPRCasFinder
AACAGCAGATCCTTCGCTGCGCTCTGGATGACA	AGAGGGGGTAGTGGGAGTGCGAGCGACCGTGTGGGCTGGCCGCTCGGCTC
AACAGCAGATCCTTCGCTGCGCTCAGGATGACA

Protein	Signature genes	Signature genes Name	Protein_function
NC_008009.1\|WP_011523782.1\|3528378_3531759_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379864
NC_008009.1\|WP_148210340.1\|3524978_3525503_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011523781.1\|3526151_3528119_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NC_008009.1\|WP_041856784.1\|3532660_3533170_+\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011523776.1\|3520673_3521738_-\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|223646
NC_008009.1\|WP_011523775.1\|3519799_3520681_-\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|183065
NC_008009.1\|WP_011523773.1\|3518274_3518943_-\|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl\|CDD\|273990
NC_008009.1\|WP_011523785.1\|3533620_3534496_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NC_008009.1\|WP_148210341.1\|3534513_3535419_+\|ABC-transporter-permease	unknown	unknown	unknown
NC_008009.1\|WP_011523778.1\|3523470_3524190_-\|phosphate-uptake-regulator-PhoU	unknown	unknown	gnl\|CDD\|273990
NC_008009.1\|WP_011523774.1\|3518949_3519711_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224042
NC_008009.1\|WP_011523790.1\|3538906_3539398_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|225076
NC_008009.1\|WP_049761927.1\|3533200_3533617_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NC_008009.1\|WP_011523789.1\|3537315_3538812_+\|glycerol-kinase-GlpK	unknown	unknown	gnl\|CDD\|198361
NC_008009.1\|WP_187148836.1\|3523201_3523372_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011523779.1\|3524428_3524914_+\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_187148835.1\|3517946_3518087_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_187149009.1\|3522007_3522964_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl\|CDD\|273374
NC_008009.1\|WP_083763772.1\|3535458_3536439_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379279
NC_008009.1\|WP_041856787.1\|3536527_3537307_+\|aquaporin-family-protein	unknown	unknown	gnl\|CDD\|223653

Protein	Function_ID	Function_description	E-value
NC_008009.1\|WP_011523782.1\|3528378_3531759_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379864	pfam16640, Big_3_5, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold.	7.36892e-14
NC_008009.1\|WP_011523773.1\|3518274_3518943_-\|phosphate-signaling-complex-protein-PhoU	gnl\|CDD\|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	1.14425e-58
NC_008009.1\|WP_011523781.1\|3526151_3528119_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	2.6987e-50
NC_008009.1\|WP_011523789.1\|3537315_3538812_+\|glycerol-kinase-GlpK	gnl\|CDD\|198361	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subgroup is composed of mostly bacterial and archaeal glycerol kinases (GK), including the well characterized proteins from Escherichia coli (EcGK), Thermococcus kodakaraensis (TkGK), and Enterococcus casseliflavus (EnGK). GKs contain two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The high affinity ATP binding site of EcGK is created only by a substrate-induced conformational change, which is initiated by protein-protein interactions through complex formation with enzyme IIAGlc (also known as IIIGlc), the glucose-specific phosphocarrier protein of the phosphotransferase system (PTS). EcGK exists in a dimer-tetramer equilibrium. IIAGlc binds to both EcGK dimer and tetramer, and inhibits the uptake and subsequent metabolism of glycerol and maltose. Another well-known allosteric regulator of EcGK is fructose 1,6-bisphosphate (FBP), which binds to the EcGK tetramer and plays an essential role in the stabilization of the inactive tetrameric form. EcGK requires Mg2+ for its enzymatic activity. Members in this subgroup belong to the FGGY family of carbohydrate kinases.	0
NC_008009.1\|WP_011523776.1\|3520673_3521738_-\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	1.04551e-102
NC_008009.1\|WP_011523775.1\|3519799_3520681_-\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|183065	PRK11268, pstA, phosphate ABC transporter permease PstA.	1.57381e-87
NC_008009.1\|WP_041856787.1\|3536527_3537307_+\|aquaporin-family-protein	gnl\|CDD\|223653	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism].	1.94303e-72
NC_008009.1\|WP_011523785.1\|3533620_3534496_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.64143e-61
NC_008009.1\|WP_011523778.1\|3523470_3524190_-\|phosphate-uptake-regulator-PhoU	gnl\|CDD\|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	4.66123e-15
NC_008009.1\|WP_011523774.1\|3518949_3519711_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	8.66463e-168
NC_008009.1\|WP_011523790.1\|3538906_3539398_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	9.68094e-10
NC_008009.1\|WP_049761927.1\|3533200_3533617_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	1.75114e-25
NC_008009.1\|WP_187149009.1\|3522007_3522964_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl\|CDD\|273374	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88., phosphate ABC transporter, phosphate-binding protein. This family represents one type of (periplasmic, in Gram-negative bacteria) phosphate-binding protein found in phosphate ABC (ATP-binding cassette) transporters. This protein is accompanied, generally in the same operon, by an ATP binding protein and (usually) two permease proteins. [Transport and binding proteins, Anions].	4.72757e-132
NC_008009.1\|WP_083763772.1\|3535458_3536439_-\|ATP-binding-protein	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	2.34794e-29

>NC_008009.1|WP_148210340.1|3524978_3525503_-|hypothetical-protein
MIGTAQEKGAVETIDATAMGTSTQLGKNVSIKIRIERYATEEERKALVDAFMQGQSEGLIKKLEKMPSMGRISLPSTTGYQLAFVREIPTATGRKIRFVTDRPLAFGEVRQNTRSQAFGLTAGEIDINDSDKNKTTGVLFPAAQLIINAEGELQMELYQNPWKLVNIIEWKKKD
>NC_008009.1|WP_011523779.1|3524428_3524914_+|hypothetical-protein
MTVRTISRVACAFAILSVVALHAQKEPKRGKACSAPHPEQYCTAQNTCGGNGQACTVGVERTGDSAKVTASSSAKKGNALFCVKKGSEVSWEAAEKNLGFVIDVKPVFPFDKGEAIIGGSGRPVPLTADKTGCFTYTASACKSGSTYGMCKTVTGNFIIVE
>NC_008009.1|WP_011523778.1|3523470_3524190_-|phosphate-uptake-regulator-PhoU
MATLSAGGQQDAACMHIRELTMNACKVAHSAAGAVAEGIATGVNALLETVRPREIELDRLDREIDSAVTTHITGATEESAREMLACMKLSIGMERIGDLLLGFSNRALVAASRCEMEDVRDLTLMASRLEKMLSEVREAFEMRNLDKALAVLRSDAEIDRLRNLVFVRHLENPGGTHRSESFHVVFMTQALERAGDHVKNMAEEVCHLVSGQSVRHLLRSIDKPLEQMFLDQLRTKHAL
>NC_008009.1|WP_187148836.1|3523201_3523372_-|hypothetical-protein
MGEFATAKAPIRMINEPIVQEPARGFVERWVMIACAEILSALTNVERVGRDPLLAS
>NC_008009.1|WP_187149009.1|3522007_3522964_-|phosphate-ABC-transporter-substrate-binding-protein-PstS
MAFAQTTLNGAGATFPYPIYSKWFSEYHKAHGDVEINYQSIGSGGGIRQVTTGTVDFGASDGPMTDEQLQQSKVKIVHIPTVLGAVVPAYNVPGVSGEIKFPADVLANIFLNKISNWNDKAIAAANPGVKFPDQNIIVIHRSDGSGTTYIFTDFLSKVSPDWLQVAGKGTAVKWPVGLGGKGNEGVAGMIRQTPGAIGYIELIYALQNNIPYGSVKNSSGQFIKASLESVTAAAQGVKMPNDYRVSITNPPGKTAYPISSFTWLLIPQPYKDGAKGKIITDFLNWELDNGQGMAGSLSYAPLPKEVADKVRQTIKGLK
>NC_008009.1|WP_011523776.1|3520673_3521738_-|phosphate-ABC-transporter-permease-subunit-PstC
MAASEVPSNSPAVKPPKVATTVEIPKPKPESLKDFGVLGQSRFGSSAGVRVADNIFRGAMLVSALSIFGIVLLVLWELIQKSQMTLHQFGWKFFIGSDWDPVAGNFGALPFIYGTIVSSILALIIAVPLSVGVAVFTTEMCPKALRTPISFMVELLAAIPSVIYGLWAIFVLAPLLRNYVQPWLAKTLGWTGLFSGPPYGIGMLAAGVILAIMIIPIIASVTREVLIAVPQNQREGVLALGATRWEMIRTGVLRNARIGIVGGVILGLGRALGETMAVTMVIGNRPEIAKSLFAPGYTMASVIANEFSEASDDLYLSALVEIGLALFIVTMIVNALARLLVWSITRGTPARAHA
>NC_008009.1|WP_011523775.1|3519799_3520681_-|phosphate-ABC-transporter-permease-PstA
MPNGDIGIRPQSELSWSRKSANIMSNVAAVGAAALVLLPLGAIFVYLLMKGIGSINIAFLTQTPKPVGEPGGGMANAIAGSAMILAMASCIGVPLGIGSGIYLSEFGRNRFGDSVRFVADVLNGVPSIVIGIAVYSLVVVPQKHFSAFSGAVALGIMMIPTIARTTEEMLLMVPQSIREAAYGLGISQWRTTISIALRTATSGVITGVMLAFARVAGETAPLLFTAFGNQYWSHSLNQPTAALPLQIFTYAISPFEEWHRQAWAGALILIVLIVGAVTAVRVVAGRGMVRASN
>NC_008009.1|WP_011523774.1|3518949_3519711_-|phosphate-ABC-transporter-ATP-binding-protein
MGVGIQVRDLNAYYGKAHVLKHVDMKMAPNHVTALIGPSGCGKSTFVRCLNRMHETIPEAYAEGEVLVGDKDIYARGTAAVDVRRRVGMVFQKPNPFPTMSIYDNVASGLKLNGIRKKAVLDEAVQRSLEASALWNEVKDHLHKKSGASLSGGQQQRLCIARALAVQPDVLLMDEPASALDPISTSKIEELMFTLKENYTVVVVTHNMQQAARVAEYTGFFLMGSVIEFDTTQKIFTTPSDKRTEDYITGRFG
>NC_008009.1|WP_011523773.1|3518274_3518943_-|phosphate-signaling-complex-protein-PhoU
MRTRFQHGLDELKEKLLRMGGLAEQAIERAVEAYRKRDAKACQAVFDGERDINAAEREIDELALDLLAMQQPMAVDLRFILAVVKINADLERVGDQAVNIAQRVLDMISSPETEVPVDIPRMAETVATMVQRALESFIDGKAELAEAVLQMDNIVDRIKDEAFVVLVDQMNKYPETTRYSLDVLLIARNLERIADHATNIAEDVIFWVRGADVRHGGAHYPS
>NC_008009.1|WP_187148835.1|3517946_3518087_-|hypothetical-protein
MDFHHCKDLPVWAQILVDCDAKANRDTEGLAEPSEDLAVPDENVAA
>NC_008009.1|WP_011523781.1|3526151_3528119_-|serine-hydrolase
MRARAFLAFLFTLVLVSSLSSQNSAEKLAADTPKTTVLGNPFIAPKDWSVRVKGPATIIEAPEGDSWIALVDVKDAKTADEALAAAWKAYKPDAKWPVKVTSDLPDRDGWSKRREYDYQTSPNEKRGVGALTYYSGTAWTVIIEDLADATAEKRGGQADVIFSRLLPKGYSRETFAGKKANRLDQARIAELSRFVEQGIKETGVPGVSFGLVQDGKVVFADGFGVKELGKSDKPDADTLFMIASNTKALTTLMLARLVDEKKLNWDTPVTQLFPSFKLGDEATTKSVLVKHLICACTGMPRQDLEWLFEYGKMTPESSLALLGTMQPTSKFGELFQYSNLMAAAAGYTAAHVVHPDTELGKGYDEAMQSYVFDPLGMKATTLSFDRALAANHSEAHSPDINGKPAKAPMNVNEAVAPLRPAGGAWSNINDMLKYVSMELANGKLPDGSTYVSKEALLQRRAPQVAIGKDVTYGMGLEVDTTYGVPVVHHGGDLIGHHSDMIWLPDQNVGAVILTNGDPGWLIRGRFSRKLLEVVFDGRKEADAELKSDADSFYAALAAERKLMTVPADATESAKLAKHYSNASLGDVDVSQSGSATIFDFGEWKSEMSTRKNPDGTISFITILPGMEGSEFVVGSGPKKTLTMRDAQHEYVFESK
>NC_008009.1|WP_011523782.1|3528378_3531759_+|VCBS-repeat-containing-protein
MRQVAAVSFFLVFTAVFSAYSQDLTQAKRTPAASGSTQPNVFLTPKQYPAGPSGVTSIAKGDFNNDSYMDVAVTNVSGTITVLLGKGDGTFQAPVSYPALSSPVSIAAADLNGDGKLDLAVANSGSGSISVFLGNGDGTFQSHTDVAVGTSVQMLTVADFNGDGKPDLAVLVDGMVSVLIGKGDATFNAIGEYAKPCATYLATGDFNGDGKTDIVAGRQCVLLGNGDGTFQPPVGSQKIGNTVSTAVGDINGDGKLDLIEGGIGDSDGTPRALVVVLLGNGDGTFQPPQGFFGYGSGVQGLLLADVNGDSHPDIVLSSSENVEVVNGKGDGTFEPGVLYPVGNRPVAGGLVLSDFTGSGRLDLAVLTSCANPSICGDGAVTLLRGKGDGTYVAPASYYIFEGDERFDAVGGWVAVGDFDGDGKLDVLEVFDTRAFISLGNGDGTVQTGQRYYQVAYQSDGAVVGDFNGDGKLDAAILHSCDVFYSDPGPGNPPPYCVSAGSVGVLLGNGNGTWQRWPESLYFGVGDTPTSIATGDFNQDGKLDLVVSDGANAYILLGNGDGTFPVHQAYPTGAAADYLNPFLPNAQSVVVGDFNGDGAPDVAVSNSDGGIAVLLGNGDGTLRAPQLFPAIKSSQSLAIGDLNRDGKLDIVASDGSGSISIFLGNGDGTFQTSKVYAAVGSQSVTVGDFNGDGILDVASGTGHTVSLLLGNGDGSLQPPVNYIVGLSATGLAAGDFNGDGALDLVTEDFSILLNRQGTQLNVQSSRNPSNVGQPVTFTVTSAASLPETGLPSGTITLRDGSTVLGESGVSGVFDVKVSGLTAGTHQITATYSGDNNFQPHTTAILTEHVGAPATMISPALGSILTSTTVTFAWKAAAGASQYSLYLGTKPGRDDLGYVNAHSSTSATVKNLPSTGSSLYVTLFSLVGGVYYSNSYTYILPGTPAKAKMTSPLPGTMLVGKDATFTWSHGTGVTYYSLYVGTKGYGTHDLDFINATTTSASVSNLPADGSTIYVQVNSYIDGAWTSQSYTYISGSGTPAPATMISPTPGSSISGNSATFTWTSGVGVSEFSLYVGTGGVGSHNIAFIETGTTSATVTGLPATGATIYVRLNSFVNGAWQWVDYSYRNP
>NC_008009.1|WP_041856784.1|3532660_3533170_+|hypothetical-protein
MEHPMEKAAPSEAQQTFTQIKALAGEWEGAVAVEPPMPGMKDQPIKPLHLTMRVTSRGHTLVHEFQEAGTVLDATKYDHPVTMFYVDDNALSLVHYCDAGNRPHMVARKSADGKTIDFDFVDLSGSNQHGHMAHATFTMVDADHHVEEWTYMLPGDKPVHARMTLTRTK
>NC_008009.1|WP_049761927.1|3533200_3533617_+|GntR-family-transcriptional-regulator
MDQWNENQPIYRQLRDRVVAMILDGVLKDGDPLPSVRTVAAEYHVNPLTVLKSYQELVDEGLIEARRGLGMFVNSGASALLLNAEREKFLTEDWPRISETIERLGLKPADLLNGRSASSSAGGTSSKKKQGKSSQGGE
>NC_008009.1|WP_011523785.1|3533620_3534496_+|ABC-transporter-ATP-binding-protein
MICIQARGLRKTYGTTVALDGIDLEVKEGRIVGLIGPNGAGKTTALNAILGLTPCQGDLRVLGKHPWSARDELMREACFISDVAVLPRWMKVSQVLDYVAGVHPLFDRQKAEGFLKRTSIRHASKVSELSKGMITQLHLSVVMAINAKLLVLDEPTLGLDILFRKQFYESLLNDYFDGSRTIIVTTHQVEEIENILTDVIFMDRGRLVFNRSLDEIESRYVELTAKPENVVAARALRPVYERSSLGRTVLLFDGVDRAQLAGWGSTRTPNLADLFVAIMDSSQTGARGGLQ
>NC_008009.1|WP_148210341.1|3534513_3535419_+|ABC-transporter-permease
MMESQVTTTSPPAAQISAMRRFVWCVRRELWENRSIYLAPLAIGGVVLTGFAISLLRLPDKVRALSAGDPMRLRAVVEQPFLFAALILMMVDMVVAAFYCLDALYGERRDRSILFWKSLPVSDLMTVLAKASIPILVLPLVSFAVTVATQIIMLIVGSVVFAAHGMSASVLWTHVPVLQTAGIHFYHLVVYHGLWYAPFYGWLLLVSAWSKRTPLLWAVLPAVAVVVIEKIAFNTSYFGGLLLQRLGGSSQSGGGNGMTMDMLTPHHAGQFLVSPGLWFGFVLTAGFLLAAARLRRWRGAV
>NC_008009.1|WP_083763772.1|3535458_3536439_-|ATP-binding-protein
MQGGIVPSNESERLKALRQYKILDTQPEQAFDDLALIASHICETPIALITLVDEDRQWFKSRIGIDVQETARSISFCSHAIEQKGVFTVPDATLDPRFRDNPVVKGEPHIRFYAGAPLASRDGYALGTLCVIDYVPRTLTPEQKNALTALERQVAAQLELRRNLEELRVALEGIENLSAMIPYCSTCQMNIVIPADPEDMKKISAGVVELLNNKRWTQSEIADVQLALDEALINAIRYGCNNDRSKHVQCCVTFDDSGELVVVIKDPGPGFDVKAVPNPLEGEGLFRGSGRGVFLINKLMDTVEYADQGSKVLMRKRPEASLSPSQ
>NC_008009.1|WP_041856787.1|3536527_3537307_+|aquaporin-family-protein
MTARTTLAAELLAEFLGTLVLILFGTGVVAMVQLFPSAHPGETINGGYTNITIGWGLAVTMGMYIAARVSGAHLNPAVTLALAVFRGFPWRKVVPYSLVQTAGAFVAAAIVYLNYLPAFHKVDPGLARTAGVFTTFPAFGEIPLAGFLDQLIGTALLLLMIFAITDERNMPPQSNLTPLMIGLVVVAIGMSFGAMHGYAINPARDFGPRLFTVVAGFRQNGITDGSRVWWIPIVAPLLGGVIGAAIYDFGVRPFLPSSK
>NC_008009.1|WP_011523789.1|3537315_3538812_+|glycerol-kinase-GlpK
MRLPYILALDQGTTSSRAIVFDQDGVVRSVAQREFTQIFPQAGWVEHDPEEIWASQISVAVEALSRAELRSRHVAAIAITNQRETAVVWDRETGRPVYNAIVWQDRRTAGFCDQLKAAGHEEFVQQRTGLLIDSYFSGSKVRWILDNVPQARSLAERGRLAFGTVDSWLIWKLTSGKLHITDVSNASRTMLFNIHTCQWDEELLRLLEIPASMLPEVRSSSEVYGTVQTSLGLESIPIAGIAGDQQASLFGQRCTSPGMAKNTYGTGCFMLQNTGERAVPTSNRLVTTVAWKIGDVVEYALEGSVFIGGAVVQWLRDGLRLVRSSGEFQELANSVKDNGGVYVVPAFVGLGAPHWDQYARGGIFGITRGTTDGHVARAALESIAYQVADLLDAMQRDTGVPLPELRVDGGAAANETLLQFQADIMGVPVVRPSVTETTALGAAFLAGIAVGLWSDPQVIAKMPVEQKRFEPRMGSAEALALRHQWEKALSRVKGWEEA
>NC_008009.1|WP_011523790.1|3538906_3539398_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MAAEKGFSLIELLIVVAIILIIAAIAIPNLLRSRMAANEASAVGSLRTINTAEMTYSSAYPDVGFTLTLTNLAGPTRICDTGSRRATSTRACLIDNVLGAGTKSGYTFVLSGAAAATPQSLYSIAASPITVGSTGQRGFYSDETGVIRYNQTGSATSNDNALQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_008009_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008009_3

5221136-5221242

Orphan

Consensus_repeat	Method
CGTCGCGCTGCGCGCGACTCCGCTCAGGATGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008009_3

>merge|NC_008009|3|5221136-5221242|CRISPRCasFinder
CGTCGCGCTGCGCGCGACTCCGCTCAGGATGACAGAGCGAAAACTTTTGTTCGATCCGAAAGTGTTCGACTCCGTCGCGCTGCGCGCGACTTCGCTCAGGATGACAG

>NC_008009|3|3|5221136-5221242|CRISPRCasFinder
CGTCGCGCTGCGCGCGACTCCGCTCAGGATGACAG	AGCGAAAACTTTTGTTCGATCCGAAAGTGTTCGACTC
CGTCGCGCTGCGCGCGACTTCGCTCAGGATGACAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_008009.1\|WP_011525196.1\|5224893_5225457_+\|DUF4252-domain-containing-protein	unknown	unknown	gnl\|CDD\|379445
NC_008009.1\|WP_011525198.1\|5226132_5227065_+\|phosphoesterase	unknown	unknown	gnl\|CDD\|309350
NC_008009.1\|WP_011525187.1\|5206172_5208989_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_008009.1\|WP_011525201.1\|5228788_5230606_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NC_008009.1\|WP_041856013.1\|5204926_5205937_+\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011525191.1\|5218092_5218452_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|163261
NC_008009.1\|WP_011525200.1\|5227619_5228579_-\|HD-GYP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NC_008009.1\|WP_148210233.1\|5223913_5224438_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_008009.1\|WP_187148897.1\|5217813_5217981_+\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011525185.1\|5202293_5203865_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011525188.1\|5209085_5211833_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_008009.1\|WP_011525195.1\|5224555_5224897_+\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011525199.1\|5227093_5227594_-\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011525197.1\|5225453_5225966_+\|hypothetical-protein	unknown	unknown	unknown
NC_008009.1\|WP_011525192.1\|5218448_5221088_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|274576
NC_008009.1\|WP_011525186.1\|5204267_5204930_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NC_008009.1\|WP_011525193.1\|5221270_5223739_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_008009.1\|WP_011525189.1\|5211941_5214617_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NC_008009.1\|WP_187148898.1\|5230857_5231313_+\|TonB-family-protein	unknown	unknown	gnl\|CDD\|367555
NC_008009.1\|WP_011525190.1\|5214626_5217686_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NC_008009.1\|WP_011525196.1\|5224893_5225457_+\|DUF4252-domain-containing-protein	gnl\|CDD\|379445	pfam14060, DUF4252, Domain of unknown function (DUF4252). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 154 and 182 amino acids in length.	2.25653e-24
NC_008009.1\|WP_011525198.1\|5226132_5227065_+\|phosphoesterase	gnl\|CDD\|309350	pfam04185, Phosphoesterase, Phosphoesterase family. This family includes both bacterial phospholipase C enzymes EC:3.1.4.3, but also eukaryotic acid phosphatases EC:3.1.3.2.	4.21895e-17
NC_008009.1\|WP_011525187.1\|5206172_5208989_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.27232e-118
NC_008009.1\|WP_011525201.1\|5228788_5230606_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NC_008009.1\|WP_011525191.1\|5218092_5218452_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|163261	TIGR03433, padR_acidobact, transcriptional regulator, Acidobacterial, PadR-family. Members of this protein family are putative transcriptional regulators of the PadR family, as found in species of the Acidobacteria. This family of proteins has expanded greatly in this lineage, and where it regularly is found in the vicinity of a putative transporter protein [Regulatory functions, DNA interactions].	1.30754e-58
NC_008009.1\|WP_011525200.1\|5227619_5228579_-\|HD-GYP-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	2.56725e-60
NC_008009.1\|WP_148210233.1\|5223913_5224438_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.86986e-31
NC_008009.1\|WP_011525188.1\|5209085_5211833_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.98944e-113
NC_008009.1\|WP_011525192.1\|5218448_5221088_+\|ABC-transporter-permease	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	0
NC_008009.1\|WP_011525186.1\|5204267_5204930_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	4.27808e-11
NC_008009.1\|WP_011525193.1\|5221270_5223739_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.95129e-113
NC_008009.1\|WP_011525189.1\|5211941_5214617_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.15731e-117
NC_008009.1\|WP_187148898.1\|5230857_5231313_+\|TonB-family-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	8.9158e-16
NC_008009.1\|WP_011525190.1\|5214626_5217686_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	8.34329e-115

>NC_008009.1|WP_011525192.1|5218448_5221088_+|ABC-transporter-permease
MTPRRFFLRSRRDAEVTQEIQTHIAEETAENVARGMSAEEARRRAYLKFGNPEIVREQVWQQNTLTLLDSLWRDLKYAARSLRRAPAFSVMAIFVMALGIGGTVAMFTVVRNVLLNPLPYPESQNLYALWEHEDTGNFSPNLPVAGGSFLEWQKAAKGSAELALVSPWQGYNVSAEGGKLPEMIDSASISWNFFRVLGVQPALGRDFTADDDRKEAPATVILAHSFWVRRYSHDPNILGKSIYLDAKPYTVIGVLPESFTFSSAMSQSNAQAVWTTVGHEMPELLSIYDDHEFFGVARLAKGVTFAQLMSRVDTAQKQVKAEHPGAAVHPGAIGHSMLDDAVAKYKTPFYALLAATLCVLLIACLNVASLLVARIAARSKEHAIRAALGGSRLRLLRERLTESLLLSTAGGAIGVLMAWGALRWLVLTRHDINRIETIHLDGFAFAFSVGAVLFAACFSALIAWMSADDKRILATLQESSRSHSAGGKRATLRRVLLVGEVGLTVVLLVGAGLLLKSYLRLRSTDLGIPVDNVLTLRVILPDARYSGDAKPAAFFEQLLQRVKTVPGVEAAALISRAPGQGWGGDSLMTVVEHPPLPKGVGLDLQRRGADPGYFAAAKVPMLKGRTFRDDERLDHAQVLILSESAVKLCFPAGDDPIGKHMTFGDQKKAYEVIGVVGDTRWDITTPAMPTFYLPIYSHAYTGTTVMVRASHNVESLAMPIQRIIGEMDPDLPVSGVLTLQQTISRSTMSSQFDSLLVLAFAAIALVLAAAGLYGVLAYLVTQRTGEIGVRIALGARREQVLGMVLVDGLRPALLGLVLGLAGSAATAKLIESMLYQTKPFDIPVFAAVIVTLLAMAALACLYPAWRASRLDPAQALRME
>NC_008009.1|WP_011525191.1|5218092_5218452_+|PadR-family-transcriptional-regulator
MAPDKSANNEMLKGTLDMLVLRTLLSGDAHGHTIAKVIERTSDDVLEVEEGSLYPALHRLEDRGWVSSYWGTSENNRKAKYYRLTAAGKRQLHSEVSRWKQMAKAIANVLGEKQAEVEE
>NC_008009.1|WP_187148897.1|5217813_5217981_+|hypothetical-protein
MAKEQSDSERDEKLAENRKASGDAARKQLGIPAKKRREDENHAGVKIVPKPTDEK
>NC_008009.1|WP_011525190.1|5214626_5217686_-|serine/threonine-protein-kinase
MIGQTFSHYRITEKLGGGGMGVVYKAEDTRLHRFVALKFLPPELARDPQALARFQREAQAASALNHSNICTIYDIGEDNGQAFIAMEYLDGVTLKHRIEGRALDLEVLLPIAIEIADALDAAHAAGIVHRDIKPANIFITKREHAKILDFGLAKVEVLASTSAATMTAGVDEKQLTSPGSTLGTVAYMSPEQARAKELDARTDLFSFGAVLYEMATGQLAFRGDSTATVFEAILNRAPVPPVRLNPDLPPKLEDIINKALEKDRNLRYQHAADIRADLQRLKRDTETGRSAAVVAMPDFMEQTVTVPPPSSKKLSAATTPAAASTPSAPAAAGSSAIVQAAGGRNGLIIGIAGILIAIAVAAFFLLRGGKPSTTGNSRAAHKAIAVLYFNNLTQDQSLNWLDNGLTDMLTTNLAQVKGLDVLSTDRIMTAVRGVSKDGKGLDPSQAQKVARDAGADAFITGALLKVGPTQLRLDVRAQDTNSGQILFSDKVEGADVQSIFGMVDRLTANLAGTFLPESDRPQKGPEIEQASTSNLEAYKHYQLGRDYSERFLTEDAVREYEEAVRLDPQFAMAMIRLEGEFAISGDLKSGFEWAARAQQLQARLPRYEQLQLNLLLSSRGGDYDAQIALLRQNGEEFPRDMANRALIGHHLSVYQGKASEAVAFLKGLQAEYPHDENVLNFLTYASAEAGDLNGAMAANDAYIQVRPGDPNPFDTRGDALFFAGHNDEAVTSYRKAMELGFNEHDKLAIVYAEQNKTDMARASLAQFKEKASPLNQLYASVFEAQFAQSRGDVEGAISAYRTAIKGLESAKQNDVAGDILLRASELSVLLGQTAPALAYAQQQKLGGAEGAAVAFLETMQGNEAAVDPALQKFLTAKPWLSPFQQNLVRSRNALWLAIAHNDAPAAAAQVARLPNAQMPYLLFLKGRAHLLANDLAAAESDFKATRQWDRNLENFRVMSLRTPIWSVLSSFYLGQVYERSGKRDEAINSYQQFLSHFETSHTKLPQVAEARTALNHLMK
>NC_008009.1|WP_011525189.1|5211941_5214617_-|protein-kinase
MIGQTFSHYHILEKLGGGGMGVVYKAEDTRLRRFVALKFLPDPVANDPQTLSRFQREAQAASALNHPNICTIYDVGEDDGRVFIAMEYLEGFTLKHLIEGTPLKTAQFLDLGIQIADALDAAHSAGIVHRDIKPANIFVTPRGQAKVLDFGLAKLGQVASRGGASDVTVGNSAVVGTDQLTSPGSTIGTIGYMSPEQARGEVLDHRSDLFSFGVVLYEMATGQQPFSGATSAVVFEAILNKVPTPANDVNPTVPKQIEEVLSKALEKDRELRCQSAAELRADLKRVKRDTDSSRAKAAGVLVAEPSAATKPASPIAAKSVSAGKPFPWLWIAASILLALAVGAVVGKRVWGSAAPSAPLYHELTFRRGDVRSARFAPDGQTLLYSAAWQGNPVETFSAREGMVESRSLGLAKAELMAISSKGEMALSLNSHPTGTWTRVGTLARAPLAGGTPRPILEDVEWADWSPDGENLAVVRNVGGHDRLEYPIGKVLYETSGGWISYPRVSPKGDYIAFMDHPTQGDDGGTIAVVDMSGTKKVLTREWYGTEGLAWTPDGKEIWFTASELGLFHYISGVDLSGKLRLISRVPGSLLIFDIWRDGRVLIARSERRREVMGLSAGATKERNLSWLDYSYPTDLSLDGKTLLFDEEGIGGGVQYGGSQDMTYAVYTRGTDGSPALRLGDGSSLSLSPDQKWAMVQTPAAPQQLRLLPTGPGESQTITNDSINHQYARWVPDGKRFIFTGNEPGKGVRLYIQTLGTTQPTPISPEGLDAQSFAISSDGQWAAGVAHDDKTYLYPTGGGDARLVTGVEPGDVPINFSADGRSLYVFRKDEVPAKVYRVELATGKKTVLKEIAPIDPTGVSMIGPILITPDGKNYAYGFYRTLGDLYIVEGLK
>NC_008009.1|WP_011525188.1|5209085_5211833_-|serine/threonine-protein-kinase
MGSPARYNPATLMALNPGLKLGPYEIQSPLGAGGMGEVYRATDTRLDRIVAIKILPAHLSANPEARQRFEREARSISALNHPNICALYDIGTQDGTSFLVMEYVQGETLEARRQKGPLPLKQVTEIGIQVCDALEKAHRAGIIHRDLKPGNIMLTASGAKLLDFGLAKAVGVLGAQAATAGTHTPDTPTMNVSALRAPAAGLTQQGTIVGTFQYMAPEAAEGLATDARSDIFSLGCVLYEMVTGRRAFEGKSQLSVLTAILERDPEPISTIQPLTPLALEYTVHTCLEKNPDQRFQTAHDVKLQLVWIAKSGSQASAKAIAGKPQPRGGLWLAAAAGAILAALLVAGVLMSTQKQPRVMRTNLVAPNGMVFETLYRNGPPELSSDGTRVAFVARKDGQNSIWVRSLDKLEATQVQGTAEGFRPFWSPDGTSLAFFAHAKLWRVDLNGVAPVAIADAPEGRGGTWGAGNTIVFAPNTGGPLMEVDAAGGAATPVTKMVVTVQGGTDRWPHFLPDGKHFLYLRVQTGNSSDHNELRVGSVDQSTDTLIMHGGVYETRYVSGWLLVDRTGSLLAWRFDPKNAKTSGEGIQIVGKLATDEVTFAGVFSVSQQGILLYQPGSSETGDRHVWTDASGKPGAQISEPGYYGPTRLSPDGTRVVTPVSSATGDSDIWMWDLLGGARARLSKGDVFVDMPTWSADARTIYFGQSDKDGHEQIRAVPADGSAPERTLLKIDGDVLPVETTKDGRWLLYEELIPGSLNNNEVLKALPLGSGDAPFTVLDSVAAYSKASLKPESNDWLAYQSNESGHSEVYLTRFPHPGAKYQVSQSGATQPLWSKDGKRLYYLDNSQHLISVDIQLRGDSPQIGAPKTLFQTTIRDSITANGYDVTRDGRFLLVNSVMENNAPVVLVTNWETELKK
>NC_008009.1|WP_011525187.1|5206172_5208989_-|serine/threonine-protein-kinase
MIGQTFSHYRILEKLGGGGMGVVYKAEDTRLHRFVALKFLPPELARDPQALARFQREAQAASALNHPNICTIYDIGDDNGQGFIAMEFLEGMTLKHRINSQPVDLETVLTLAIDIADALDAAHSKGIVHRDIKPANIFVIERGHAKVLDFGLAKVTPRSASSVPSANTMTATELAVEDEHLTSPGSTLGTIAYMSPEQAKGKELDARSDLFSFGSVLYEMVTGALPFQGETSALMFDAILNRDPLPPLRFNPKVPAKLEEIIQKALEKDRDLRYQHASEMRSDLKRLQRDSSSAPRQASAPTTEASSARVSAAYVPPSSSASAAPVAQASAPSHSTGSSSVIAVAREHKFGLVGIAVVALGLLGAGGFGIYEFLSRSAQAPFQNFTVAQLTNTGKARQSAISPDGKYVVSVQDDNGVRSLWLRNVPTGSDTQVLPPSPVIYATLTFSPDGNYIYYRKASSAAQSEWDIFRIPVLGGSPQVLAKDVDSNVTFSPDGTKMAYFRGNDPEVGKLYFLIANLDGSNEETVYIGSAVDLPRSIAWSADGKRLFYNIFTLKTALSEIRQIEIASKKASLLSAQTSTLVQELERLPGSSSLLIRGLDKSNYTKSQIGVLSDSGQVVPITRDTNSYEGMSLSGDGKTIAAVQQRVTRTFWTAAMSNDALAAPPQSVAGVENAHTFAFNPDGSLLVSDDQTLRRTDLAGAATTTVLGDGNAYIVELAPCGDRYFVLQWAFHGGGYSYPVWRVNLDGSNPLRLTDGSYDGRPNCSPDGKTVYFEPTTSKATVARVPIDGGKQETVPGSEVERGFGIGVGHAVSPDGKLLAFNAEISTDAQGHVGEKIVFVTLDGSGAAQRIINADPRISSGRLANTLTFTPDGKSVAYVVREHGVENVFIQPIDGTPGHQLTNFTSQLISNFHWSPDGKTLAIARADASSDVVLLKEK
>NC_008009.1|WP_041856013.1|5204926_5205937_+|hypothetical-protein
MSSPKRSTLAPALTLMVLAPVIAEVMSGATRLSFLFALLPEILVWGGGALLIRELVRRWGGGWTSMLLLGLGLSMAEEFLIQQTSLAPLPWLGNAVQYGRAWGVNWIYFLYMLGFESVWVVLVPVQITELMFRDRREQTWLRTRGIIIVSIFFALGSFVAWFAWIKQARPNVFHVPPYNPAPTTLLAGFLAIGLLGVLAYVLRNVRVVPRSNGKHLSPWLVAIFTAVLALPWWWLMVLIFVPGQHLPFGIAMALGVAWAAISYFVISRWTSAAGWSDIHRWATAFSATVAMMAITYLGSSTWSKTDLVGKVVGNVVMVFLLVLLLKKLRALSSRGA
>NC_008009.1|WP_011525186.1|5204267_5204930_+|PadR-family-transcriptional-regulator
MRTKQQERFGLWELAVLALLREAPMHPYQMQKLLRQRHKDEILSLKRGSLYHAIHRLEAAELIDAVRTARDGKRPERTTYRIAAAGKNALQEWMQQMIGVPKQESSDFMAALSFLPLLTVETTTKKLAERAAALEAEIAGMAGGIKVTAEWLPRIHLVESEYLLAMRKAELAWVRGLEADLRSGKLAWDGEEILKNPHVVKAREDAGKDAEPRRAGRKSK
>NC_008009.1|WP_011525185.1|5202293_5203865_-|hypothetical-protein
MDRRRFLQSTAATGLTLGLLKATSQASVPEHNWDKYDWGAGPAVPDRLYQGPFPQYGPCAVVPESDVSMITSSSRDIVSNYGMGLMVYVSDDTGPINVPGQPQAQALEDLIKLPFAQKIYIRPNWREIQKQPGRLDFPEYWKETFDLARRYDKRIGFRIQLENPDSPEPGMPDFLINKVPYVKLKGEWKGSSGEQRYKKDNRVPRYDHPAYQAAFRELNELLAAEYNGHPQVEFMDTMMYGFWGEGHTWPYEGNPFPSALVAEQTWMQMLELQLQLWTKVPLATNTQPDFSNVGNADMLDRTVRTGNWLRTDTIFIENTQIEALSYRPPWTAAICEVGFTTGDPKELQIDQDGITYNEQIITHAADVGVNYLSLWNWHKLSAHNLLSYYEKYPAPIDEMARKIGYRIRPSFIWTFVRDGAHGLVVGLANDGIAPVPGVLRLTVLSEDGKVHFSGCVDAGYPKPIGIHQAMLQLPAGVDWKGLRLKAELEVKGVRYPVRWACRQVNPDGSLTLRHNYKPDQPLV
>NC_008009.1|WP_011525193.1|5221270_5223739_-|protein-kinase
MIGQTVSHYRIVEKLGGGGMGVVYKAEDTRLHRFVALKFLPTELAKDPQARARFEREAQAASALNHPNICTIYDIGDDNGQGFIAMEFLEGVTLKHRITTKPMETGEIVTLAIEIADALDAAHAKGIVHRDIKPANLFITDRGHAKVLDFGLAKVTATKSAVAVENAPTTTVDEHLTSPGSTLGTVAYMSPEQVLAKDLDPRTDLFSFGVVLYEMATATLPFRGDSSGVIFDAILHAEPVPAVRLNPDVPEKLEDILAKLLEKDRDVRYQSAAELKADLKRLQRDSESQRFRVTSGESIARKPQPVRRKTMVEIASVVAVLLVIIGFAAYHFLAPTKHDSAQTSSAKPTVESIAVLPFRDLASSAGDSWAIGITDAIISRLTSLKNLAVRPTTSVMKYAKETPEATEAAKALQVDSILEGTYQRTPDVTRVTVQLIDGRTGTTKWSQRYDLRSADILTFEDQVAAKVVEGLQIEISPKEQQNIQQQLTANVDAYNDYLQGRAYYNEYLETSQLDSLEKSQAVLKQAIALDPNFADAYAALAQAYQFQAANFLHDAKANLQRGREASLQSLKIKPDFAEGLVALAGGYAEEGRLAEGIRASRRAVELAPNSPSAWQILAYNYYYAGLNDQAAEGYARLVQLDPGPPQPHWMHARMLLYSGKAEAAEQAMRDTVARFPNQFKVLGYYGSFLYYEGKLDEAQGYLDRGVQLSQNVDDDSPRMMAGFLYASRKQRDKIAPRLFHYTPDQVIDADAAHWIAGIYALLGERDKAILWLKRSIELGDINYPWYVRDKNFDSLRSDPEFQKILDGVRVRHEAIAKEFAQP
>NC_008009.1|WP_148210233.1|5223913_5224438_+|sigma-70-family-RNA-polymerase-sigma-factor
MTEWRPQFEQLLHQHQGMVFGLALHFLRDRPAAEEIAQDVFLALHKNLRSVSSDEHAKYWLRRVTVQRCIDHTRRRPAIEMPLEDAREIGVAPVENDVFVRERLRRLIGGLSPDARAVMILRYQEDLSPPEIAATLSMPVATVKSHLQRSLGVLREKMGVATTAGTPDPSLRSG
>NC_008009.1|WP_011525195.1|5224555_5224897_+|hypothetical-protein
MKDFEDQLREALRPDEVPAGFANRVLARLPEAYPAPPPRTLYRRVALWAAAVLVAAGTITGVQVEHTRRERARGEEAREKVMLALRIAGTKLNKAQSHVREISADGDGNGESQ
>NC_008009.1|WP_011525196.1|5224893_5225457_+|DUF4252-domain-containing-protein
MKMLARIGLMLLLCAPLLNAQELPWKLNFDKYANEATETVDVTLDKNMLNLAKNFLSDKDADQRQAKEIVSQLNGIYVRSYEFDKPGMYSDADIESFRAQLKAPEWNRIVGVRSKRGGENDFVYVRQVNGKMTGLAVIAAEAREFTLVYIDGPIDLAKISSLGGQFGVPRFYGSNLKIDVGKKGDKE
>NC_008009.1|WP_011525197.1|5225453_5225966_+|hypothetical-protein
MKRIVSLAIFAAFLACALPLHAEDEFNTAVHRLSDKLGHRPMRIPFLGAILFFTPARSTHLKLATWEDIDAHLSLEDLEASLQGSLGSEWHPFVKVNSRKSHECTLIYARAVGNDMRLMVINAEAHEVEVIEMDLTKKLQELWLADARHEAKHKNYAGDEKHDDEKHDGA
>NC_008009.1|WP_011525198.1|5226132_5227065_+|phosphoesterase
MRIVSALTLSLLLCFAACGGNSSNNGGSGGSGGGGSASVPQFQHVAIVVLENASYHDVIGNTQMPWLSGLAGKYASLQSYYANAHPSIPNYFMLTTGQTITFDDAFSNTVSSDNLARDITSAGLTWKAYEESIPAAAYTGASTGLYIERHDPFSYFSDVRGTAQANNIVPSSQLSADIGANSLPNFLWITPNALNSAHSCPASNANCTLNDRLAAADAWLSANVQPLLSNSEFASNGLLIVVFDEGDDTDLDHGGGHVVCVLAGAHVKQGYTSSATYQHQDVLSLIGHALKLSSVPGAGATGGTMTEFFQ
>NC_008009.1|WP_011525199.1|5227093_5227594_-|hypothetical-protein
MTSDSAALARLQKSFGNREIAFGCGGLKVFSGEHLTAQQVGYSVSPDGANLCTDGQGSWQSGWLVIGYDTCMGNPLFVDSANAELPVFTAYHGEGAWHPSMIAASADNFVSCLTEFERIASGRENPVQLNKNPVTEVEREAFLKRVKALSPSAPLDMYYWDALLDG
>NC_008009.1|WP_011525200.1|5227619_5228579_-|HD-GYP-domain-containing-protein
MRKDILQRLSEVNRELWLILSLFIIAGILNNLVAQHGFILNLYALPTIFSAYVYGRRHAVLTALASICIVVILTYVNPAVLSSRNMVLGSTERWFDITIWGGILMVTAYAMGTLYERNDQRLRELRNTYNGVLMILRHFISKDKYTQNHSYRVSVYATKIASEMGFDRERLEDVRASALLHDIGKLDISRDLLYKAAKLTEAEYEEVKLHVQKGINMLEPVGGSLRRVLPIILSHHDRFDGNGYTPKAGDAIPIESRILAVADSYDAMTSDRPYRKAMSAFEARDLITQKSGIEFDPDVVRAFNTVFSRHEMEIPEVVV
>NC_008009.1|WP_011525201.1|5228788_5230606_-|translational-GTPase-TypA
MSKALRNIAIIAHVDHGKTTLVDAMLKQSGTFRANEQVADRVMDSNELERERGITILAKNTAVFYHDIKINIVDTPGHSDFGGEVERALKMVDGVMLLVDASEGPLPQTRYVLGKALEANLPPIVVINKIDRPDARAQEVLNEIYDLFIDLDAKEEQLEFPVLYTNAKIGTASTDAKVAGEDLQPLFEAIVKTIPPPKGKTDGPLQVLVANLDYSDYLGRIAIARVFNGTLFTGEDVVIAKLDGSFHKTKITKLFSFSGLKRVDITETELGDIVAVAGVEGITIGETITDADNPKPLPHIAIDEPTIAMQFMVNTSPFAGKDGQYVTSRNLRERLAKELLTNVSLRVEDSDSPDIFKVAGRGELQLSILIEMMRREGYELMVGKPEIVTKHIDGKLVEPIEKLTVDIPETFIGVVIEKIGTRKGQMEKMTNHGYGRVRMEFKVPSRGLIGLRSELLTDTRGTIVMNSLFAGYTEWQGDIPHRPTGALVADRNGLTTAYALFGLQERGELFLGPGVDVYEGMVIGENSRDNDLDVNCVREKKLTNMRASTSDDAIRLVPFKNLNLEQAIDFIADDELCEVTPKTLRLRKKILQANRRPRRYATPED
>NC_008009.1|WP_187148898.1|5230857_5231313_+|TonB-family-protein
MKISQVVLASFLLTCFVACNKPAANTAAPAAAAQPAVDPNATIPPKFVSGVNAPFPDNLWNKPGTVTVAATVGTDGTITETKVVSSPHPELNDLATNAVKQWKFESAKKNGQAVPFTITVNLKFEKPAPGTKVQQMPPAKAPAASAEKKQK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1239456-1239483	6	0.786
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	984461-984488	6	0.786
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1239463-1239490	6	0.786
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1487892-1487919	6	0.786
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1487836-1487863	6	0.786
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1166383-1166410	6	0.786
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	975446-975473	6	0.786
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1112979-1113006	6	0.786
NC_008009_1	1.1\|50651\|28\|NC_008009\|CRISPRCasFinder	50651-50678	28	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	858483-858510	6	0.786

1. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

2. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

3. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

4. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

5. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

6. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

7. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

8. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

9. spacer 1.1|50651|28|NC_008009|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

----tcgcagatgccgccgataattcggtcgc	CRISPR spacer
ggcgtc----atgccgccgataatgcggtcgt	Protospacer
    **    ************** ******.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2860483 : 2903784

Microbacterium_phage(50.0%)

transposase,protease,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049761885.1\|2860483_2861350_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_011523222.1\|2861652_2862144_-	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_011523223.1\|2862140_2862578_-	YciI family protein	NA	NA	NA	NA
WP_011523224.1\|2862789_2863563_-	hypothetical protein	NA	NA	NA	NA
WP_011523225.1\|2863622_2863907_-	DUF2277 domain-containing protein	NA	NA	NA	NA
WP_011523226.1\|2863964_2864867_-	5'-3' exonuclease	NA	NA	NA	NA
WP_049761886.1\|2864919_2865774_-	DUF4262 domain-containing protein	NA	NA	NA	NA
WP_011523228.1\|2865830_2867123_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_011523229.1\|2867119_2867443_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_148210101.1\|2867675_2868119_+	hypothetical protein	NA	NA	NA	NA
WP_011523230.1\|2868174_2868780_-	hypothetical protein	NA	NA	NA	NA
WP_011523231.1\|2869257_2869905_-	hypothetical protein	NA	NA	NA	NA
WP_041856634.1\|2869947_2870280_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_011523233.1\|2870503_2871535_-	GHMP kinase	NA	NA	NA	NA
WP_011523234.1\|2871584_2872607_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_011523235.1\|2872755_2875020_+	TonB-dependent receptor	NA	NA	NA	NA
WP_011523236.1\|2875113_2875407_+	hypothetical protein	NA	NA	NA	NA
WP_011523237.1\|2875493_2877488_+	oligopeptide transporter, OPT family	NA	NA	NA	NA
WP_011523238.1\|2877487_2878843_+	hypothetical protein	NA	NA	NA	NA
WP_011523239.1\|2878902_2879595_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_041855675.1\|2879953_2883643_+	Ig-like domain repeat protein	NA	NA	NA	NA
WP_011523241.1\|2883701_2885048_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_011523242.1\|2885156_2885546_-	cupin domain-containing protein	NA	NA	NA	NA
WP_011523243.1\|2885577_2885883_-	hypothetical protein	NA	NA	NA	NA
WP_011523244.1\|2886163_2889256_+	sensor signal transduction histidine kinase	NA	NA	NA	NA
WP_011523245.1\|2889239_2889887_+	response regulator transcription factor	NA	NA	NA	NA
WP_011523246.1\|2889956_2890322_+	hypothetical protein	NA	NA	NA	NA
WP_011523247.1\|2890458_2891139_+	response regulator transcription factor	NA	NA	NA	NA
WP_187148821.1\|2891444_2892665_+	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_011523249.1\|2893048_2894080_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011523250.1\|2894227_2894788_-	type II secretion system protein	NA	NA	NA	NA
WP_148210102.1\|2895070_2896009_+\|protease	aspartyl protease family protein	NA	NA	NA	NA
WP_011523252.1\|2896071_2900931_-	hypothetical protein	NA	NA	NA	NA
WP_049761888.1\|2901319_2901886_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_041855678.1\|2901882_2902197_+	hypothetical protein	NA	NA	NA	NA
WP_011523255.1\|2902206_2902707_+\|tail	phage tail protein	A0A2R3ZZT3	Microbacterium_phage	1.3e-14	34.2
WP_011523256.1\|2902733_2903231_+\|tail	phage tail protein	NA	NA	NA	NA
WP_011523257.1\|2903253_2903784_+\|tail	phage tail protein	A0A0U4JXW2	Arthrobacter_phage	3.4e-13	32.9

DBSCAN-SWA_2

3743485 : 3791038

Salmonella_phage(20.0%)

integrase,portal,terminase,protease,tail,capsid

attL 3734714:3734729|attR 3767539:3767554

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3734714:3734729	attL	NA	NA	NA	NA
WP_011523949.1\|3743485_3744649_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_041855787.1\|3744730_3744916_-	hypothetical protein	NA	NA	NA	NA
WP_011523950.1\|3745260_3745521_-	hypothetical protein	NA	NA	NA	NA
WP_011523951.1\|3745531_3746125_-	hypothetical protein	NA	NA	NA	NA
WP_011523952.1\|3746108_3746534_-	hypothetical protein	NA	NA	NA	NA
WP_011523953.1\|3746538_3746976_-	hypothetical protein	A0A1B1IRB1	uncultured_Mediterranean_phage	1.2e-24	47.8
WP_011523954.1\|3746986_3747364_-	hypothetical protein	NA	NA	NA	NA
WP_011523955.1\|3747397_3747778_-	hypothetical protein	NA	NA	NA	NA
WP_011523956.1\|3747774_3750579_-	hypothetical protein	A0A2L0V157	Salmonella_phage	1.7e-31	27.5
WP_011523957.1\|3750579_3751011_-	hypothetical protein	A0A2L0V149	Salmonella_phage	3.1e-25	48.3
WP_011523958.1\|3751007_3751634_-	hypothetical protein	NA	NA	NA	NA
WP_011523959.1\|3751633_3752302_-	hypothetical protein	NA	NA	NA	NA
WP_011523960.1\|3752311_3755011_-	hypothetical protein	NA	NA	NA	NA
WP_011523961.1\|3755007_3757494_-\|tail	phage tail tape measure protein	A0A2I5ARC1	Synechococcus_phage	2.7e-12	30.9
WP_041855790.1\|3757546_3757969_+	hypothetical protein	NA	NA	NA	NA
WP_011523964.1\|3758276_3758684_-	hypothetical protein	NA	NA	NA	NA
WP_011523965.1\|3758680_3758956_-	hypothetical protein	NA	NA	NA	NA
WP_011523966.1\|3759140_3759566_-	hypothetical protein	NA	NA	NA	NA
WP_011523967.1\|3759631_3759985_-	hypothetical protein	NA	NA	NA	NA
WP_011523968.1\|3760104_3760416_-	hypothetical protein	NA	NA	NA	NA
WP_011523969.1\|3760412_3760871_-	hypothetical protein	NA	NA	NA	NA
WP_011523970.1\|3760871_3761207_-	hypothetical protein	NA	NA	NA	NA
WP_011523971.1\|3761206_3761578_-	hypothetical protein	NA	NA	NA	NA
WP_011523972.1\|3761631_3762078_-	hypothetical protein	I3UM00	Rhodobacter_phage	2.2e-18	40.1
WP_011523973.1\|3762155_3764501_-\|capsid	phage major capsid protein	G8EXZ9	Synechococcus_phage	4.0e-50	31.9
WP_011523974.1\|3764497_3766108_-\|portal	phage portal protein	A0A1W6JT60	Escherichia_phage	6.1e-74	34.9
WP_011523975.1\|3766107_3766713_-	hypothetical protein	NA	NA	NA	NA
WP_011523976.1\|3766975_3769057_-\|terminase	phage terminase large subunit family protein	A0A0C5ABH4	Bacteriophage	1.6e-103	39.2
3767539:3767554	attR	NA	NA	NA	NA
WP_011523977.1\|3769256_3769697_-	hypothetical protein	NA	NA	NA	NA
WP_011523978.1\|3769910_3770150_-	hypothetical protein	NA	NA	NA	NA
WP_011523979.1\|3770139_3770514_-	hypothetical protein	NA	NA	NA	NA
WP_011523980.1\|3770510_3770744_-	hypothetical protein	NA	NA	NA	NA
WP_011523981.1\|3770740_3771388_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_041855791.1\|3771388_3771574_-	hypothetical protein	NA	NA	NA	NA
WP_011523982.1\|3771570_3772146_-	hypothetical protein	NA	NA	NA	NA
WP_041855792.1\|3772186_3772747_-	hypothetical protein	NA	NA	NA	NA
WP_011523984.1\|3772743_3773709_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_187148838.1\|3773708_3773885_-	hypothetical protein	NA	NA	NA	NA
WP_011523985.1\|3773881_3774385_-	hypothetical protein	NA	NA	NA	NA
WP_011523986.1\|3774437_3774869_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011523987.1\|3774877_3775555_-	hypothetical protein	K4HZY5	Acidithiobacillus_phage	6.9e-11	36.4
WP_041855796.1\|3775853_3776447_-	hypothetical protein	NA	NA	NA	NA
WP_148210140.1\|3776493_3777132_-	hypothetical protein	NA	NA	NA	NA
WP_041855798.1\|3777325_3777559_-	hypothetical protein	NA	NA	NA	NA
WP_187148839.1\|3777558_3777729_-	hypothetical protein	NA	NA	NA	NA
WP_049761944.1\|3777856_3778198_-	hypothetical protein	NA	NA	NA	NA
WP_011523991.1\|3778194_3778668_-	hypothetical protein	NA	NA	NA	NA
WP_011523992.1\|3778664_3778916_-	hypothetical protein	NA	NA	NA	NA
WP_011523993.1\|3778915_3780709_-	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	7.9e-14	28.9
WP_148210141.1\|3781058_3781979_-	hypothetical protein	NA	NA	NA	NA
WP_148210142.1\|3781926_3783072_-	hypothetical protein	NA	NA	NA	NA
WP_041856838.1\|3783654_3784386_+	ZIP family metal transporter	NA	NA	NA	NA
WP_041855800.1\|3784387_3784615_-	hypothetical protein	NA	NA	NA	NA
WP_011523998.1\|3784676_3785759_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_011523999.1\|3785851_3786370_-	DUF4149 domain-containing protein	NA	NA	NA	NA
WP_011524000.1\|3786535_3789010_+	hypothetical protein	NA	NA	NA	NA
WP_011524001.1\|3789054_3790014_-	MoxR family ATPase	NA	NA	NA	NA
WP_041855801.1\|3790168_3791038_-\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_008009

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection