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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_008593 Clostridium novyi NT, complete sequence 5 crisprs cas3,csa3,DEDDh,DinG,cas2,cas1,cas4,cas5,cas7b,cas8b1,cas6 2 17 7 1

Results visualization

1. NC_008593
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_008593_1 152250-152357 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_008593_2 1853852-1855193 TypeI-B III-B
20 spacers
cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_008593_3 1864520-1866264 TypeI-B III-B
26 spacers
cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_008593_4 1867121-1870431 TypeI-B III-B
50 spacers
cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_008593_5 2514547-2514651 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_008593_2 2.1|1853882|36|NC_008593|CRISPRCasFinder,CRT 1853882-1853917 36 NC_008593.1 1361923-1361958 2 0.944
NC_008593_2 2.21|1853884|36|NC_008593|PILER-CR 1853884-1853919 36 NC_008593.1 1361923-1361958 2 0.944

1. spacer 2.1|1853882|36|NC_008593|CRISPRCasFinder,CRT matches to position: 1361923-1361958, mismatch: 2, identity: 0.944

caaatttgaaaaaacttgaaacttttttaaatatat	CRISPR spacer
caaatttgaaaaaacttgaaacttttttagaaatat	Protospacer
*****************************.* ****

2. spacer 2.21|1853884|36|NC_008593|PILER-CR matches to position: 1361923-1361958, mismatch: 2, identity: 0.944

caaatttgaaaaaacttgaaacttttttaaatatat	CRISPR spacer
caaatttgaaaaaacttgaaacttttttagaaatat	Protospacer
*****************************.* ****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_008593_4 4.1|1867151|35|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1867151-1867185 35 NC_015426 Clostridium botulinum BKT015925 plasmid p2BKT015925, complete sequence 28500-28534 1 0.971
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 MK448910 Streptococcus phage Javan336, complete genome 6346-6371 4 0.846
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 MT366947 Bacillus phage Hyb2phi3Ts-SPbeta, complete genome 67684-67709 4 0.846
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 KY030782 Bacillus phage phi3T, complete genome 67684-67709 4 0.846
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 MT366946 Bacillus phage Hyb1phi3Ts-SPbeta, complete genome 70283-70308 4 0.846
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 MT366948 Bacillus phage Hyb3phi3Ts-SPbeta, complete genome 66431-66456 4 0.846
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 MT366945 Bacillus phage phi3Ts, complete genome 67684-67709 4 0.846
NC_008593_3 3.9|1865084|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865084-1865119 36 NC_015427 Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence 29495-29530 4 0.889
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 NZ_KY000025 Agrobacterium genomosp. 6 strain AR125 plasmid pTi_AR125, complete sequence 39856-39881 5 0.808
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 NZ_KY000029 Agrobacterium genomosp. 6 strain CFBP5499 plasmid pTi_CFBP5499, complete sequence 39856-39881 5 0.808
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 NZ_CP039902 Agrobacterium tumefaciens strain CFBP5877 plasmid pTiCFBP5877, complete sequence 201192-201217 5 0.808
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 NC_010929 Agrobacterium tumefaciens Ti plasmid pTiBo542, complete sequence 13678-13703 5 0.808
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 NZ_CP039893 Agrobacterium tumefaciens strain CFBP5499 plasmid pTiCFBP5499, complete sequence 165991-166016 5 0.808
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 NZ_KY000026 Agrobacterium genomosp. 6 strain CFBP1873 plasmid pTi_CFBP1873, complete sequence 13680-13705 5 0.808
NC_008593_3 3.1|1864550|26|NC_008593|CRISPRCasFinder 1864550-1864575 26 NC_015912 Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF21, complete sequence 26-51 6 0.769
NC_008593_3 3.4|1864754|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1864754-1864789 36 NZ_CP040376 Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed2, complete sequence 48209-48244 6 0.833
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP036355 Bacillus sp. SYJ plasmid unnamed1, complete sequence 121684-121719 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP053290 Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence 309876-309911 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP014284 Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence 249682-249717 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP016317 Bacillus cereus strain M3 plasmid pBCM301, complete sequence 183547-183582 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NC_011655 Bacillus cereus AH187 plasmid pAH187_270, complete sequence 110214-110249 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP045534 Bacillaceae bacterium C02 plasmid unnamed1, complete sequence 80396-80431 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP032609 Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence 43523-43558 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NC_010924 Bacillus cereus strain AH187 plasmid pCER270, complete sequence 166623-166658 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NC_011777 Bacillus cereus AH820 plasmid pAH820_272, complete sequence 148930-148965 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 CP045776 Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence 157599-157634 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP042928 Bacillus cereus strain G1-1 plasmid unnamed, complete sequence 180461-180496 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP053953 Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence 318140-318175 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NC_016792 Bacillus cereus NC7401 plasmid pNCcld, complete sequence 165492-165527 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP009299 Bacillus cereus D17 plasmid unnamed, complete sequence 41079-41114 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP053950 Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence 212387-212422 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NC_011973 Bacillus cereus Q1 plasmid pBc239, complete sequence 205753-205788 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP053930 Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence 136315-136350 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP022346 Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence 276489-276524 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP040343 Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence 94796-94831 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP040345 Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence 423550-423585 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP040341 Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence 122784-122819 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NC_018492 Bacillus cereus FRI-35 plasmid p01, complete sequence 81017-81052 7 0.806
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 NZ_CP033789 Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence 75734-75769 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP036355 Bacillus sp. SYJ plasmid unnamed1, complete sequence 121684-121719 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP053290 Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence 309876-309911 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP014284 Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence 249682-249717 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP016317 Bacillus cereus strain M3 plasmid pBCM301, complete sequence 183547-183582 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NC_011655 Bacillus cereus AH187 plasmid pAH187_270, complete sequence 110214-110249 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP045534 Bacillaceae bacterium C02 plasmid unnamed1, complete sequence 80396-80431 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP032609 Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence 43523-43558 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NC_010924 Bacillus cereus strain AH187 plasmid pCER270, complete sequence 166623-166658 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NC_011777 Bacillus cereus AH820 plasmid pAH820_272, complete sequence 148930-148965 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 CP045776 Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence 157599-157634 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP042928 Bacillus cereus strain G1-1 plasmid unnamed, complete sequence 180461-180496 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP053953 Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence 318140-318175 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NC_016792 Bacillus cereus NC7401 plasmid pNCcld, complete sequence 165492-165527 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP009299 Bacillus cereus D17 plasmid unnamed, complete sequence 41079-41114 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP053950 Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence 212387-212422 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NC_011973 Bacillus cereus Q1 plasmid pBc239, complete sequence 205753-205788 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP053930 Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence 136315-136350 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP022346 Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence 276489-276524 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP040343 Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence 94796-94831 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP040345 Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence 423550-423585 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP040341 Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence 122784-122819 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NC_018492 Bacillus cereus FRI-35 plasmid p01, complete sequence 81017-81052 7 0.806
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 NZ_CP033789 Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence 75734-75769 7 0.806
NC_008593_3 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865544-1865579 36 NZ_CP028886 Borrelia turcica IST7 plasmid lp32-A, complete sequence 3757-3792 7 0.806
NC_008593_3 3.13|1865347|34|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865347-1865380 34 NC_022874 Bacillus thuringiensis YBT-1518 plasmid pBMB0229, complete sequence 39729-39762 8 0.765
NC_008593_3 3.13|1865347|34|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865347-1865380 34 NZ_LR214939 Mycoplasma salivarium strain NCTC10113 plasmid 2 571183-571216 8 0.765
NC_008593_4 4.3|1867282|34|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1867282-1867315 34 AP014139 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S39-C56, *** SEQUENCING IN PROGRESS *** 8927-8960 8 0.765
NC_008593_4 4.3|1867282|34|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1867282-1867315 34 AP014138 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S36-C43, *** SEQUENCING IN PROGRESS *** 23157-23190 8 0.765
NC_008593_4 4.48|1870233|37|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1870233-1870269 37 NC_016982 Lactococcus garvieae 21881 plasmid pGL5 complete sequence 4166-4202 8 0.784
NC_008593_2 2.11|1854538|34|NC_008593|CRISPRCasFinder,CRT 1854538-1854571 34 MN657105 Psychrobacter sp. strain ANT_P48 plasmid pA48P2, complete sequence 2852-2885 9 0.735
NC_008593_2 2.31|1854540|34|NC_008593|PILER-CR 1854540-1854573 34 MN657105 Psychrobacter sp. strain ANT_P48 plasmid pA48P2, complete sequence 2852-2885 9 0.735
NC_008593_3 3.4|1864754|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1864754-1864789 36 MN693310 Marine virus AFVG_25M374, complete genome 2909-2944 9 0.75
NC_008593_3 3.15|1865478|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865478-1865513 36 MK448902 Streptococcus phage Javan308, complete genome 23722-23757 9 0.75
NC_008593_3 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865544-1865579 36 MT074137 Bacteroides phage DAC16, complete genome 99765-99800 9 0.75
NC_008593_3 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865544-1865579 36 MT074142 Bacteroides phage DAC23, complete genome 103614-103649 9 0.75
NC_008593_3 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865544-1865579 36 MT074141 Bacteroides phage DAC22, complete genome 103890-103925 9 0.75
NC_008593_3 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865544-1865579 36 MT074139 Bacteroides phage DAC19, complete genome 103662-103697 9 0.75
NC_008593_3 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865544-1865579 36 MT074140 Bacteroides phage DAC20, complete genome 103661-103696 9 0.75
NC_008593_4 4.46|1870099|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1870099-1870134 36 MN693076 Marine virus AFVG_25M561, complete genome 9756-9791 9 0.75
NC_008593_2 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT 1854078-1854113 36 CP024688 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-4-144K, complete sequence 63561-63596 10 0.722
NC_008593_2 2.24|1854080|36|NC_008593|PILER-CR 1854080-1854115 36 CP024688 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-4-144K, complete sequence 63561-63596 10 0.722
NC_008593_3 3.13|1865347|34|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865347-1865380 34 AP014291 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S25-C40, *** SEQUENCING IN PROGRESS *** 31062-31095 10 0.706
NC_008593_3 3.15|1865478|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865478-1865513 36 AJ609634 Bacteriophage EJ-1 proviral DNA, complete genome 24705-24740 10 0.722
NC_008593_3 3.15|1865478|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR 1865478-1865513 36 NC_005294 Streptococcus prophage EJ-1, complete genome 24705-24740 10 0.722
NC_008593_4 4.30|1869046|37|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1869046-1869082 37 NZ_CP016589 Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence 404733-404769 10 0.73
NC_008593_4 4.34|1869311|37|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1869311-1869347 37 JX878496 Serratia phage phiMAM1, complete genome 122233-122269 10 0.73
NC_008593_4 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1868001-1868036 36 CP020757 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-18, complete sequence 25647-25682 12 0.667
NC_008593_4 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1868001-1868036 36 CP020757 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-18, complete sequence 84985-85020 12 0.667
NC_008593_4 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1868001-1868036 36 NC_020381 Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-39, complete sequence 11397-11432 12 0.667
NC_008593_4 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1868001-1868036 36 NZ_CP021064 Bacillus thuringiensis strain ATCC 10792 plasmid poh3, complete sequence 32917-32952 12 0.667
NC_008593_4 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1868001-1868036 36 NZ_CP021064 Bacillus thuringiensis strain ATCC 10792 plasmid poh3, complete sequence 92594-92629 12 0.667
NC_008593_4 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1868001-1868036 36 NC_017204 Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT51, complete sequence 32564-32599 12 0.667
NC_008593_4 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT 1868001-1868036 36 NZ_CP014852 Bacillus thuringiensis strain HD12 plasmid pHD120161, complete sequence 47148-47183 12 0.667

1. spacer 4.1|1867151|35|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to NC_015426 (Clostridium botulinum BKT015925 plasmid p2BKT015925, complete sequence) position: , mismatch: 1, identity: 0.971

aagcttgtattaccaaacttaagtttttgaactat	CRISPR spacer
aagcttgtattaccaaatttaagtttttgaactat	Protospacer
*****************.*****************

2. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to MK448910 (Streptococcus phage Javan336, complete genome) position: , mismatch: 4, identity: 0.846

atttttaaaattcaaaagttaattac	CRISPR spacer
atttttaaaattcagaagtcaattta	Protospacer
**************.****.****  

3. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to MT366947 (Bacillus phage Hyb2phi3Ts-SPbeta, complete genome) position: , mismatch: 4, identity: 0.846

atttttaaaattcaaaagttaattac	CRISPR spacer
ttattaaaaattcaaaagttaatgac	Protospacer
 * ** ***************** **

4. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to KY030782 (Bacillus phage phi3T, complete genome) position: , mismatch: 4, identity: 0.846

atttttaaaattcaaaagttaattac	CRISPR spacer
ttattaaaaattcaaaagttaatgac	Protospacer
 * ** ***************** **

5. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to MT366946 (Bacillus phage Hyb1phi3Ts-SPbeta, complete genome) position: , mismatch: 4, identity: 0.846

atttttaaaattcaaaagttaattac	CRISPR spacer
ttattaaaaattcaaaagttaatgac	Protospacer
 * ** ***************** **

6. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to MT366948 (Bacillus phage Hyb3phi3Ts-SPbeta, complete genome) position: , mismatch: 4, identity: 0.846

atttttaaaattcaaaagttaattac	CRISPR spacer
ttattaaaaattcaaaagttaatgac	Protospacer
 * ** ***************** **

7. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to MT366945 (Bacillus phage phi3Ts, complete genome) position: , mismatch: 4, identity: 0.846

atttttaaaattcaaaagttaattac	CRISPR spacer
ttattaaaaattcaaaagttaatgac	Protospacer
 * ** ***************** **

8. spacer 3.9|1865084|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to NC_015427 (Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence) position: , mismatch: 4, identity: 0.889

aaaacaagctggtaaaaagaagaatgatagtataag	CRISPR spacer
aaaacaggctggtaaaaagaaaaatgatagtatacc	Protospacer
******.**************.************  

9. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to NZ_KY000025 (Agrobacterium genomosp. 6 strain AR125 plasmid pTi_AR125, complete sequence) position: , mismatch: 5, identity: 0.808

atttttaaaattcaaaagttaattac	CRISPR spacer
atttttaaaattcaaaaggtactgct	Protospacer
****************** ** *  .

10. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to NZ_KY000029 (Agrobacterium genomosp. 6 strain CFBP5499 plasmid pTi_CFBP5499, complete sequence) position: , mismatch: 5, identity: 0.808

atttttaaaattcaaaagttaattac	CRISPR spacer
atttttaaaattcaaaaggtactgct	Protospacer
****************** ** *  .

11. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to NZ_CP039902 (Agrobacterium tumefaciens strain CFBP5877 plasmid pTiCFBP5877, complete sequence) position: , mismatch: 5, identity: 0.808

atttttaaaattcaaaagttaattac	CRISPR spacer
atttttaaaattcaaaaggtactgct	Protospacer
****************** ** *  .

12. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to NC_010929 (Agrobacterium tumefaciens Ti plasmid pTiBo542, complete sequence) position: , mismatch: 5, identity: 0.808

atttttaaaattcaaaagttaattac	CRISPR spacer
atttttaaaattcaaaaggtactgct	Protospacer
****************** ** *  .

13. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to NZ_CP039893 (Agrobacterium tumefaciens strain CFBP5499 plasmid pTiCFBP5499, complete sequence) position: , mismatch: 5, identity: 0.808

atttttaaaattcaaaagttaattac	CRISPR spacer
atttttaaaattcaaaaggtactgct	Protospacer
****************** ** *  .

14. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to NZ_KY000026 (Agrobacterium genomosp. 6 strain CFBP1873 plasmid pTi_CFBP1873, complete sequence) position: , mismatch: 5, identity: 0.808

atttttaaaattcaaaagttaattac	CRISPR spacer
atttttaaaattcaaaaggtactgct	Protospacer
****************** ** *  .

15. spacer 3.1|1864550|26|NC_008593|CRISPRCasFinder matches to NC_015912 (Lactococcus lactis subsp. lactis bv. diacetylactis plasmid pVF21, complete sequence) position: , mismatch: 6, identity: 0.769

atttttaaaattcaaaagttaattac	CRISPR spacer
tataaagaaattcaaaagttaattac	Protospacer
  *   .*******************

16. spacer 3.4|1864754|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040376 (Lactobacillus plantarum subsp. plantarum strain BNH17 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.833

tttaattaaaaaagattattcaaatatttataaatc	CRISPR spacer
tttgggtaaaaaagttaattcaaatatttataaata	Protospacer
***.. ******** * ****************** 

17. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP036355 (Bacillus sp. SYJ plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

18. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP053290 (Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

19. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP014284 (Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatataaaagaaatttcaaaagaaga---attaaagcaa	Protospacer
***** ********** *********   *** * *   

20. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

21. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

22. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP045534 (Bacillaceae bacterium C02 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

23. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP032609 (Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatataaaagaaatttcaaaagaaga---attaaagcaa	Protospacer
***** ********** *********   *** * *   

24. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

25. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

26. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

27. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP042928 (Bacillus cereus strain G1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

28. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

29. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

30. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP009299 (Bacillus cereus D17 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

31. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

32. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NC_011973 (Bacillus cereus Q1 plasmid pBc239, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

33. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP053930 (Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

34. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

35. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

36. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

37. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP040341 (Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

38. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NC_018492 (Bacillus cereus FRI-35 plasmid p01, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

39. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to NZ_CP033789 (Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

40. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP036355 (Bacillus sp. SYJ plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

41. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP053290 (Bacillus cereus strain WPySW2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

42. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP014284 (Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatataaaagaaatttcaaaagaaga---attaaagcaa	Protospacer
***** ********** *********   *** * *   

43. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

44. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

45. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP045534 (Bacillaceae bacterium C02 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

46. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP032609 (Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatataaaagaaatttcaaaagaaga---attaaagcaa	Protospacer
***** ********** *********   *** * *   

47. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

48. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

49. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

50. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP042928 (Bacillus cereus strain G1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

51. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

52. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

53. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP009299 (Bacillus cereus D17 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

54. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

55. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NC_011973 (Bacillus cereus Q1 plasmid pBc239, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

56. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP053930 (Bacillus cereus strain FDAARGOS_797 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

57. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP022346 (Bacillus thuringiensis strain c25 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

58. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

59. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

60. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP040341 (Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

61. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NC_018492 (Bacillus cereus FRI-35 plasmid p01, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

62. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to NZ_CP033789 (Bacillus sp. FDAARGOS_527 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.806

aatattaaagaaatttaaaaagaagaaacatttatg---	CRISPR spacer
aatattaaagatatttcaaaagaaga---attaaagcaa	Protospacer
*********** **** *********   *** * *   

63. spacer 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028886 (Borrelia turcica IST7 plasmid lp32-A, complete sequence) position: , mismatch: 7, identity: 0.806

tttaatttttaaaatatttttatctttac---aattcta	CRISPR spacer
taaaatctttaaaatatttttatctttactaaaact---	Protospacer
*  ***.**********************   **.*   

64. spacer 3.13|1865347|34|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to NC_022874 (Bacillus thuringiensis YBT-1518 plasmid pBMB0229, complete sequence) position: , mismatch: 8, identity: 0.765

gtgaagaaacaacaaatttaactgcagctgaaaa	CRISPR spacer
ccattggaacaactgatttaactgcagctgaaaa	Protospacer
 ..  *.****** .*******************

65. spacer 3.13|1865347|34|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.765

gtgaagaaacaacaaatttaactgcagctgaaaa	CRISPR spacer
tttatacaacaactaaattaactgcagctgaaat	Protospacer
 * * . ****** ** **************** 

66. spacer 4.3|1867282|34|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to AP014139 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S39-C56, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.765

tatatttggtgtaggtacaaatgtaccgatttgt	CRISPR spacer
aatatttggattaggtacaaatgtactattatct	Protospacer
 ********  ***************.. * * *

67. spacer 4.3|1867282|34|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to AP014138 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S36-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.765

tatatttggtgtaggtacaaatgtaccgatttgt	CRISPR spacer
aatatttggattaggtacaaatgtactattatct	Protospacer
 ********  ***************.. * * *

68. spacer 4.48|1870233|37|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to NC_016982 (Lactococcus garvieae 21881 plasmid pGL5 complete sequence) position: , mismatch: 8, identity: 0.784

tataattaatatataaagaaaacaggaggtaacaaaa	CRISPR spacer
tataattaatatataaagaaaaacggatagaggagaa	Protospacer
**********************  *** . *. *.**

69. spacer 2.11|1854538|34|NC_008593|CRISPRCasFinder,CRT matches to MN657105 (Psychrobacter sp. strain ANT_P48 plasmid pA48P2, complete sequence) position: , mismatch: 9, identity: 0.735

aattcaaaatattagacctgtaaatttcttttcc	CRISPR spacer
gagtgaaaatattagaagtgtaaatttctatcaa	Protospacer
.* * ***********  *********** *.  

70. spacer 2.31|1854540|34|NC_008593|PILER-CR matches to MN657105 (Psychrobacter sp. strain ANT_P48 plasmid pA48P2, complete sequence) position: , mismatch: 9, identity: 0.735

aattcaaaatattagacctgtaaatttcttttcc	CRISPR spacer
gagtgaaaatattagaagtgtaaatttctatcaa	Protospacer
.* * ***********  *********** *.  

71. spacer 3.4|1864754|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to MN693310 (Marine virus AFVG_25M374, complete genome) position: , mismatch: 9, identity: 0.75

tttaattaaaaaagattattcaaatatttataaatc	CRISPR spacer
aaaatcaaaaaaagattattcaaatattcataaaga	Protospacer
   * . *********************.*****  

72. spacer 3.15|1865478|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to MK448902 (Streptococcus phage Javan308, complete genome) position: , mismatch: 9, identity: 0.75

attacaagaaatggttaaggaaataaaagaaaatat	CRISPR spacer
cttcaatcaaatggctaaagaaataaaagaaaatta	Protospacer
 **  *  ******.***.***************  

73. spacer 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 9, identity: 0.75

tttaatttttaaaatatttttatctttacaattcta	CRISPR spacer
aacagtttttaaattatttttatcattacaaaactt	Protospacer
  .*.******** ********** ******  ** 

74. spacer 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 9, identity: 0.75

tttaatttttaaaatatttttatctttacaattcta	CRISPR spacer
aacagtttttaaattatttttatcattacaaaactt	Protospacer
  .*.******** ********** ******  ** 

75. spacer 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 9, identity: 0.75

tttaatttttaaaatatttttatctttacaattcta	CRISPR spacer
aacagtttttaaattatttttatcattacaaaactt	Protospacer
  .*.******** ********** ******  ** 

76. spacer 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 9, identity: 0.75

tttaatttttaaaatatttttatctttacaattcta	CRISPR spacer
aacagtttttaaattatttttatcattacaaaactt	Protospacer
  .*.******** ********** ******  ** 

77. spacer 3.16|1865544|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 9, identity: 0.75

tttaatttttaaaatatttttatctttacaattcta	CRISPR spacer
aacagtttttaaattatttttatcattacaaaactt	Protospacer
  .*.******** ********** ******  ** 

78. spacer 4.46|1870099|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to MN693076 (Marine virus AFVG_25M561, complete genome) position: , mismatch: 9, identity: 0.75

aaggtacacaagcaaagaaacctaaaaaggcgaaaa	CRISPR spacer
tgaagaaaaaagcaaagaaagctaaaaaggctaaaa	Protospacer
 ... * * *********** ********** ****

79. spacer 2.4|1854078|36|NC_008593|CRISPRCasFinder,CRT matches to CP024688 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-4-144K, complete sequence) position: , mismatch: 10, identity: 0.722

aatattaaagaaatttaaaaagaagaaacatttatg	CRISPR spacer
aatattaaagatatttcaaaagaagaattaaaggaa	Protospacer
*********** **** ********** .*   . .

80. spacer 2.24|1854080|36|NC_008593|PILER-CR matches to CP024688 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-4-144K, complete sequence) position: , mismatch: 10, identity: 0.722

aatattaaagaaatttaaaaagaagaaacatttatg	CRISPR spacer
aatattaaagatatttcaaaagaagaattaaaggaa	Protospacer
*********** **** ********** .*   . .

81. spacer 3.13|1865347|34|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to AP014291 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S25-C40, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.706

gtgaagaaacaacaaatttaactgcagctgaaaa----	CRISPR spacer
acgaagaaacaacaaatttaccagcaat----aacttt	Protospacer
..****************** * ***..    **    

82. spacer 3.15|1865478|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to AJ609634 (Bacteriophage EJ-1 proviral DNA, complete genome) position: , mismatch: 10, identity: 0.722

attacaagaaatggttaaggaaataaaagaaaatat	CRISPR spacer
tttcgctcaaatggctaaagaaataaaagaaaatta	Protospacer
 **     ******.***.***************  

83. spacer 3.15|1865478|36|NC_008593|CRISPRCasFinder,CRT,PILER-CR matches to NC_005294 (Streptococcus prophage EJ-1, complete genome) position: , mismatch: 10, identity: 0.722

attacaagaaatggttaaggaaataaaagaaaatat	CRISPR spacer
tttcgctcaaatggctaaagaaataaaagaaaatta	Protospacer
 **     ******.***.***************  

84. spacer 4.30|1869046|37|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 10, identity: 0.73

ttttttctttttcttttaccttgttaggtgtttcgtc	CRISPR spacer
atttttctttttcttttagcttattagttagttgtga	Protospacer
 ***************** ***.**** *. **    

85. spacer 4.34|1869311|37|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to JX878496 (Serratia phage phiMAM1, complete genome) position: , mismatch: 10, identity: 0.73

ttaaaggattttgaggcggaatctgtggctttcaaaa	CRISPR spacer
gaacaactctttgtggcggactctgtggctttcaata	Protospacer
  * *.  .**** ****** ************** *

86. spacer 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to CP020757 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-18, complete sequence) position: , mismatch: 12, identity: 0.667

tcccattgctaatattgcaatgggaattataacgga	CRISPR spacer
aattattgctagtattgcaatgagaattattggaag	Protospacer
  ..*******.**********.******* . ...

87. spacer 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to CP020757 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-18, complete sequence) position: , mismatch: 12, identity: 0.667

tcccattgctaatattgcaatgggaattataacgga	CRISPR spacer
aattattgctagtattgcaatgagaattattggaag	Protospacer
  ..*******.**********.******* . ...

88. spacer 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to NC_020381 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-39, complete sequence) position: , mismatch: 12, identity: 0.667

tcccattgctaatattgcaatgggaattataacgga	CRISPR spacer
aattattgctagtattgcaatgagaattattggaag	Protospacer
  ..*******.**********.******* . ...

89. spacer 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021064 (Bacillus thuringiensis strain ATCC 10792 plasmid poh3, complete sequence) position: , mismatch: 12, identity: 0.667

tcccattgctaatattgcaatgggaattataacgga	CRISPR spacer
aattattgctagtattgcaatgagaattattggaag	Protospacer
  ..*******.**********.******* . ...

90. spacer 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021064 (Bacillus thuringiensis strain ATCC 10792 plasmid poh3, complete sequence) position: , mismatch: 12, identity: 0.667

tcccattgctaatattgcaatgggaattataacgga	CRISPR spacer
aattattgctagtattgcaatgagaattattggaag	Protospacer
  ..*******.**********.******* . ...

91. spacer 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to NC_017204 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT51, complete sequence) position: , mismatch: 12, identity: 0.667

tcccattgctaatattgcaatgggaattataacgga	CRISPR spacer
aattattgctagtattgcaatgagaattattggaag	Protospacer
  ..*******.**********.******* . ...

92. spacer 4.14|1868001|36|NC_008593|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014852 (Bacillus thuringiensis strain HD12 plasmid pHD120161, complete sequence) position: , mismatch: 12, identity: 0.667

tcccattgctaatattgcaatgggaattataacgga	CRISPR spacer
aattattgctagtattgcaatgagaattattggaag	Protospacer
  ..*******.**********.******* . ...

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 26979 : 36700 10 Streptococcus_phage(42.86%) NA NA
DBSCAN-SWA_2 384576 : 392439 9 Yellowstone_lake_mimivirus(16.67%) NA NA
DBSCAN-SWA_3 1044219 : 1053905 10 uncultured_Mediterranean_phage(83.33%) tRNA NA
DBSCAN-SWA_4 1224672 : 1234030 10 uncultured_Mediterranean_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_5 1300821 : 1403154 101 Clostridium_phage(32.56%) plate,tRNA,protease,terminase,head,coat,integrase,tail,portal attL 1298477:1298494|attR 1352863:1352880
DBSCAN-SWA_6 1631437 : 1644989 9 Prochlorococcus_phage(22.22%) NA NA
DBSCAN-SWA_7 2459695 : 2525043 46 Bacillus_phage(20.0%) tRNA,terminase,protease,capsid,transposase,integrase attL 2501422:2501481|attR 2533304:2533380
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_008593.1|WP_011722271.1|1394024_1394162_-|hypothetical-protein 1394024_1394162_- 45 aa aa NA NA NA 1300821-1403154 yes