Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_008506 Lactococcus lactis subsp. cremoris SK11 plasmid 4, complete sequence 0 crisprs NA 0 0 0 0
NC_008507 Lactococcus lactis subsp. cremoris SK11 plasmid 5, complete sequence 0 crisprs NA 0 0 0 0
NC_008504 Lactococcus lactis subsp. cremoris SK11 plasmid 2, complete sequence 0 crisprs NA 0 0 0 0
NC_008527 Lactococcus lactis subsp. cremoris SK11, complete sequence 1 crisprs cas3,DEDDh,csa3,RT,DinG 0 0 16 0
NC_008503 Lactococcus lactis subsp. cremoris SK11 plasmid 1, complete sequence 0 crisprs NA 0 0 0 0
NC_008505 Lactococcus lactis subsp. cremoris SK11 plasmid 3, complete sequence 0 crisprs RT 0 0 0 0

Results visualization

1. NC_008527
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_008527_1 2176974-2177069 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 66496 : 123762 54 Bacillus_phage(33.33%) bacteriocin,transposase,protease,tRNA NA
DBSCAN-SWA_2 278488 : 288398 15 Lactococcus_phage(90.91%) integrase attL 278368:278391|attR 289552:289575
DBSCAN-SWA_3 408919 : 421076 14 uncultured_virus(30.0%) tRNA NA
DBSCAN-SWA_4 552374 : 680994 114 Bacillus_phage(27.27%) bacteriocin,tRNA,transposase,protease,integrase attL 553487:553544|attR 621008:621065
DBSCAN-SWA_5 864025 : 905079 41 Streptococcus_phage(25.0%) transposase,integrase attL 886090:886106|attR 911525:911541
DBSCAN-SWA_6 929536 : 995917 52 Staphylococcus_phage(23.08%) transposase NA
DBSCAN-SWA_7 1000066 : 1013695 11 Enterococcus_phage(25.0%) NA NA
DBSCAN-SWA_8 1021267 : 1110680 108 Lactococcus_phage(70.83%) head,portal,tRNA,holin,transposase,protease,plate,tail,capsid,terminase,integrase attL 1029703:1029719|attR 1059802:1059818
DBSCAN-SWA_9 1202345 : 1271426 58 Staphylococcus_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_10 1516437 : 1526750 7 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_11 1607738 : 1619255 12 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_12 1628464 : 1696599 73 Lactococcus_phage(88.64%) bacteriocin,head,terminase,portal,holin,transposase,plate,capsid,tail NA
DBSCAN-SWA_13 1822884 : 1884973 53 Bacillus_phage(16.67%) bacteriocin,transposase NA
DBSCAN-SWA_14 1947569 : 2015853 80 Lactococcus_phage(83.02%) head,terminase,portal,tRNA,transposase,protease,capsid,tail,integrase attL 1976301:1976323|attR 2015873:2015895
DBSCAN-SWA_15 2116657 : 2184157 70 Lactococcus_phage(61.54%) transposase,terminase,tRNA,integrase attL 2109820:2109837|attR 2142384:2142401
DBSCAN-SWA_16 2243337 : 2309598 50 uncultured_Mediterranean_phage(25.0%) transposase,protease,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage