CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_008346	Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, complete sequence	9 crisprs	RT,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,csa3,DinG,WYL,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas7b,cas8b1,csx19,csx1,csx15	0	32	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_008346_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_1

275012-275084

Orphan

Consensus_repeat	Method
TTTCTTACTAACCCCCCATGGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008346_1

>merge|NC_008346|1|275012-275084|CRISPRCasFinder
TTTCTTACTAACCCCCCATGGCTCAGGGGGCCACAAACACCAACGAAAATTTCTTACTAACCCCCCATGGCTC

>NC_008346|1|1|275012-275084|CRISPRCasFinder
TTTCTTACTAACCCCCCATGGCTC	AGGGGGCCACAAACACCAACGAAAA
TTTCTTACTAACCCCCCATGGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_011639698.1\|275748_276294_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|238308
NC_008346.1\|WP_011639701.1\|279673_280519_+\|flagellar-motor-protein-MotB	unknown	unknown	gnl\|CDD\|224279
NC_008346.1\|WP_011639687.1\|267464_267902_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|224761
NC_008346.1\|WP_011639689.1\|269202_270135_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187566
NC_008346.1\|WP_041427667.1\|268181_269180_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224011
NC_008346.1\|WP_011639704.1\|282836_283772_+\|transketolase-family-protein	unknown	unknown	gnl\|CDD\|226467
NC_008346.1\|WP_011639693.1\|272634_273141_+\|flagellar-export-chaperone-FliS	unknown	unknown	gnl\|CDD\|376819
NC_008346.1\|WP_011639694.1\|273485_273872_+\|flagellar-protein-FlaG	unknown	unknown	gnl\|CDD\|377090
NC_008346.1\|WP_011639692.1\|272099_272468_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274499
NC_008346.1\|WP_011639695.1\|273912_274389_+\|flagellar-protein-FliT	unknown	unknown	unknown
NC_008346.1\|WP_011639705.1\|283847_284531_+\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
NC_008346.1\|WP_011639706.1\|284527_285412_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225088
NC_008346.1\|WP_011639700.1\|278876_279668_+\|flagellar-motor-protein	unknown	unknown	gnl\|CDD\|224210
NC_008346.1\|WP_011639690.1\|270302_271472_+\|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	unknown	unknown	gnl\|CDD\|274662
NC_008346.1\|WP_011639696.1\|274425_274896_+\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011639691.1\|271775_271982_+\|YjfB-family-protein	unknown	unknown	gnl\|CDD\|379452
NC_008346.1\|WP_173309191.1\|276387_278877_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NC_008346.1\|WP_155814254.1\|282039_282792_+\|transketolase	unknown	unknown	gnl\|CDD\|238970
NC_008346.1\|WP_081424748.1\|280619_281654_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NC_008346.1\|WP_011639697.1\|275261_275552_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379193

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_011639698.1\|275748_276294_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|238308	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site. RaiA is also thought to counteract miscoding at the A site thus reducing translation errors. The RaiA fold structurally resembles the double-stranded RNA-binding domain (dsRBD).	6.22042e-33
NC_008346.1\|WP_011639701.1\|279673_280519_+\|flagellar-motor-protein-MotB	gnl\|CDD\|224279	COG1360, MotB, Flagellar motor protein [Cell motility and secretion].	5.40361e-68
NC_008346.1\|WP_011639687.1\|267464_267902_+\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|224761	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	5.06284e-15
NC_008346.1\|WP_011639689.1\|269202_270135_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.44745e-98
NC_008346.1\|WP_041427667.1\|268181_269180_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	4.09596e-133
NC_008346.1\|WP_011639704.1\|282836_283772_+\|transketolase-family-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	4.67427e-148
NC_008346.1\|WP_011639693.1\|272634_273141_+\|flagellar-export-chaperone-FliS	gnl\|CDD\|376819	pfam02561, FliS, Flagellar protein FliS. FliS is coded for by the FliD operon and is transcribed in conjunction with FliD and FliT, however this protein has no known function.	1.20082e-47
NC_008346.1\|WP_011639694.1\|273485_273872_+\|flagellar-protein-FlaG	gnl\|CDD\|377090	pfam03646, FlaG, FlaG protein. Although important for flagella the exact function of this protein is unknown.	6.07984e-17
NC_008346.1\|WP_011639692.1\|272099_272468_+\|hypothetical-protein	gnl\|CDD\|274499	TIGR03282, methan_mark_13, putative methanogenesis marker 13 metalloprotein. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. This metal cluster-binding family is related to nitrogenase structural protein NifD and accessory protein NifE, among others. [Energy metabolism, Methanogenesis].	0.00897359
NC_008346.1\|WP_011639705.1\|283847_284531_+\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	5.06493e-113
NC_008346.1\|WP_011639706.1\|284527_285412_+\|ABC-transporter-permease	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	1.25186e-74
NC_008346.1\|WP_011639700.1\|278876_279668_+\|flagellar-motor-protein	gnl\|CDD\|224210	COG1291, MotA, Flagellar motor component [Cell motility and secretion].	1.08169e-91
NC_008346.1\|WP_011639690.1\|270302_271472_+\|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	gnl\|CDD\|274662	TIGR03588, PseC, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.	0
NC_008346.1\|WP_011639691.1\|271775_271982_+\|YjfB-family-protein	gnl\|CDD\|379452	pfam14070, YjfB_motility, Putative motility protein. This family of proteins is regulated in B. subtilis by SigD, and is likely to be involved in motility or flagellin production, Proteins in this family are approximately 60 amino acids in length, and contain two highly conserved asparagine residues.	9.13072e-07
NC_008346.1\|WP_173309191.1\|276387_278877_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NC_008346.1\|WP_155814254.1\|282039_282792_+\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	2.21365e-141
NC_008346.1\|WP_081424748.1\|280619_281654_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NC_008346.1\|WP_011639697.1\|275261_275552_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379193	pfam13451, zf-trcl, Probable zinc-ribbon domain. This is a probable zinc-binding domain with two CxxC sequence motifs, found in various families of bacteria.	2.14845e-21

>NC_008346.1|WP_011639696.1|274425_274896_+|hypothetical-protein
MTREIIREIIENFKQQKQCYSRMSDLASEQLAILEKSQGQVYASEIDGLLRQRKEILDEINENNRKNKNLQQKIVKELGIEEFVLGQLEGSLESDHYQALKEQISNLSQLLEMISEKDQQSQELMQQAIKSKRQKKPRGSSQQASQAYKQSKLTRE
>NC_008346.1|WP_011639695.1|273912_274389_+|flagellar-protein-FliT
METISPIEKARGLYGDLLLLSKEQLLLARSINADKDISQEMLTLFQKRQEIMEGIDLLLLEINQGENRNNTVNSKNSRVEFPLSLGKQQAETHDKVIQEIIAIIREIQAHDEVGRKIMQKSQREAGKKLASLKRSQAASNAYLHVDSYADGWFFDQKK
>NC_008346.1|WP_011639694.1|273485_273872_+|flagellar-protein-FlaG
MRVDGQGMAPNVFPSDTPVNRPVNSAATVVKEPGGEPRERIGRESLSAQMEAKKIEEIARNLNEAVKFASCHLEFQPYEDSGRFQVKVVNSLSGEVIKEIPPDYLLDFSIKMKEMINQVVGLFVDELA
>NC_008346.1|WP_011639693.1|272634_273141_+|flagellar-export-chaperone-FliS
MSVNAQAYNQYKKSVVETVAPEKLLLMLYDAAIKNINNAKKAIKEKDINRAHEQIMRTEEIIVELMSTLNMEYEISGRLFALYEYFYHRLTQANAQKDIVILDEVEGFLLELRGTWQEAINALKTAPSQDNKVEVEPVASVTPRIPSEAMGVKPINPATTAKGINITG
>NC_008346.1|WP_011639692.1|272099_272468_+|hypothetical-protein
MEYMYEVAGQIIELSQTIKEGLIHINEKMDEGQLKETLYLFEDVLEAFSSIEIPIQPVLQADNMDELQGATAELKKSLEMLAQAFEANDLEKARAEISQSLIPAYSRWQSELEQSLKAYRES
>NC_008346.1|WP_011639691.1|271775_271982_+|YjfB-family-protein
METAAIAGMAMGVQAARLQQEVATGVMKMQMDASKEAAQGIIDMMKMSSQALEKSVNPHLGTMLDILA
>NC_008346.1|WP_011639690.1|270302_271472_+|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase
MEIDSFIPYGRQNIEQDDIDAVIEVLRSAWITQGPWGEEFEKQVATYCGVSYAVAFNSGTSALHAAIYAAGIGPGDEVITSPVTFLATANAAVYTGARPVFVDMDINSYCIDPQLLEAAITPRSRAIVPVDYAGYPVDISVIKEIARRHNLLIIEDAAHALGARRQGRAVGQDADMSILSFHPVKHITTGEGGIVLTDNPELQERLRQFRSHGIVRDASRMMENHGPWYYEMQSLGYNFRLSDIQSALGISQLKKLETFVEERQRIACYYDQAFAGIKQLHTPPRPAAGDRHAYHLYPLLLSPGIDRQEVFSYLRERKIGVQVHYIPVHLQPYYRKNYGYGPGDFPVAEDFYRREISLPIFPGLKREEQDYVIHHVCSSVVGHRKTEGG
>NC_008346.1|WP_011639689.1|269202_270135_+|SDR-family-NAD(P)-dependent-oxidoreductase
MNILVTGGAGFIGRWVVKKLLAEGQRITALDDLSNGRLMNIDEFRDNPDFLFIEGDIKDRDTLKQVFAGGFDLVYHLAASINVQDSIDDPRTTYENDVTGTFNVLEECRRQNIKMLFMSTCMVYERSLDETGITEEHPVKPASPYAASKLAGEALTLSYYYAYGLPTVVVRPFNTYGPFQKSSGEGGVVAIFIQRELAGEELNIYGDGTQTRDLLYVEDCADFVVRAGRDSRANGQLLNAGLGRDVSINGLARMIGGDAGRIRHVAHIHPQSEIPKLLCNYDKARELLDWQPRVSLEEGLQRTREWMIVG
>NC_008346.1|WP_041427667.1|268181_269180_+|SDR-family-NAD(P)-dependent-oxidoreductase
MIRGKKVLVTGGTGTVGKKLAQRLLELEAAVVRIYSRDEHKQFAIQEHFTYQRLDMKRMRFFLGDVRDKERLKRAMEDIDLVFHLAALKHVPACEYNPSEAVKTNVIGTQNIIDCAIETAVSAVVYTSTDKAASPTNTMGATKLLSERLISSADHWKGPRQIKFLSVRFGNIINSRGSVVPLFEKQIARGGPVTLTDPLMTRFFMSADRAVDLILKSLAMSRGGETFVFKMPVLQVGDLARAVIDNSGKDVEMSIIGLRPGEKMYEELMSEEESARALETDELFVIIPYDHDRREYQECYSGARLAECSTYSSTAAEAMSLEEIKAMLNGKR
>NC_008346.1|WP_011639687.1|267464_267902_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MGLDYTGQTLMIDSNCFIYLIEGECYPLFLPRVERSFRAVSKGQCVALTSPITLTEVMTRPRKMGQEDLAYTYKALITNFPNLNIIPIDNNIADRAAALRGLYGLKTPDALQLATGLVNRATRFVTFDREFRKLPPLMNVLIPDE
>NC_008346.1|WP_011639697.1|275261_275552_+|zinc-ribbon-domain-containing-protein
MFQDKTLVCQDCGQEFVFTAGEQEFYSEKGFENEPKRCRECRVNRRNSRSNSRGPREMFAAVCAGCGAETEVPFRPVEGRPVYCMECFQKQKEAAY
>NC_008346.1|WP_011639698.1|275748_276294_+|ribosome-associated-translation-inhibitor-RaiA
MKFIIRGRNIEITDALKDYTTKRLSKLEKYIDDVKEAQVALSIEGEDHKVEVTIPLNGIILRGEEMSDDMYSSIDMVEEKLEKQIEKYKTRLYRSNRGAGLKKALAEEIKKELDKGEKIEKFKVVRSKRFALKPMDVEEAIMQMNLLGHSFFVFFNPQSEEVNVVYKRKDGNYGLIEPDFD
>NC_008346.1|WP_173309191.1|276387_278877_+|preprotein-translocase-subunit-SecA
MKSLLKSLLDDDEREVKKLRRTVEVINSLEAEFQELAEEEFPQKTGEFKERLKNGEELDDILPEAFALVREASQRVLGMRHFDVQLIGGMVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAARDADWMGPVLEYCGLSVGLIVHGLSYEERKAAYACDVTYGTNNEMGFDYLRDNMVVSADNMVQRELHYAIIDEVDSILVDEARTPLIISGEGDKPTTLYYQIAKFIPRLRNEEDYKVDEKAHVVTLTEEGVKKVEKYFTIENLSENMELAHHVNQGLKAHSLMKRDRDYVIKDEQVIIVDEFTGRLMFGRRYSDGLHQAIEAKEGVKIEKESQTLATITFQNYFRMYHKLGGMTGTAKTEEEEFRKIYGMDVVSIPTHNPMIREDQADMVYRTEEGKFRAVVEDIISRHQAKQPVLVGTISVEKSEYLSAMLAKRGVKHQVLNAKYHEKEAQIIAQAGQEETVTIATNMAGRGTDIVLGEGIQELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYVSLEDDLMRLFGSANVEGLMDRLGMDDDMPIEHKMISRAIESAQKKVEARNFSIRKNVLEYDDVINQQREVMYGERRKVLFGEDLKETVASMVDDVIEQAVERFAGEFKYSDEWDLPGFLSYIEQSIIPQPDFNQEDMRGMRKNEVVAFLAEKTQTLYEQREKEMGSEIMRELEKAILLRIIDEKWMDHIDAMDQLRNGISLRAYGQKDPLIEYKFEAFEAFQMMIESMKEDVVRYIFRVKVVQQPEERKTFENQGEEAEKKPVRVGKKIGRNDLCPCGSGKKYKKCCGRGVS
>NC_008346.1|WP_011639700.1|278876_279668_+|flagellar-motor-protein
MDIATFIGLVVGLGGLAGGFLLEGAHLSSLWGHTAFIIVFGGTIGATIVSYTMEELKKVPFFLKVVFSEKKIDYFTVMETLVETADKARREGLLSLESQLGEIDNEFLSRGLQLVIDGTDPELTRSMLEMEIEAHEKSQKVGVDIFMTAGGFAPTMGIIGTVMGLIHVLSNIAEPDKLAGAIAVAFLATLYGVASANVMWIPFGTKIKVKSGREILLMELVLEGILSIQAGENPRVIREKLMTFLPADAREKGAEQERARMEM
>NC_008346.1|WP_011639701.1|279673_280519_+|flagellar-motor-protein-MotB
MAGRRRKKVQEEEQGGMERWLITYADLITLLMVFFVLMYSMSQINAQKFAAVANSLSLVLSGQAMSTLSTQGPSMVEGLSGQMLPEGPGTIPDNQGQLDEVKRMIAEFIKAEDLTADEAQKGGSTSTTRLSDNLIVYEQERGLVISFKDTMLFASGSDELTPRAREIIQQIGGALLKLPNFIRVEGHTDNRPINTAKFPSNWELSVLRASNVVHVLNENARIPAERLSIIGYGENRPLVANDSDEGRAMNRRVDIVILKKKYDYFEPPQSTHQEDMQPGNQ
>NC_008346.1|WP_081424748.1|280619_281654_+|peptide-chain-release-factor-2
MDNCEKQIESLQKKTLQENFWSERKEAQEILKQISKLQENLNLYKELMGTAQYLNDILEMAEEENDETLWQESVRELLALQKRFREFELLVLFSGPHDYSNAIVSLHAGAGGTEAQDWVEILFRMYSRWAENSSYSIEVLDFLDGDEAGIKSVTFLVRGPYAFGKLKCEEGVHRLIRISPFDSSGRRHTSFASLSVLPEINEDIEVLINVEDLRVDTYRSSGAGGQHINKTDSAVRITHLPSGIVVQCQNERSQHANRLAAMKILQAKLYALKQKEAQDKLQSIKGDYKEIAWGSQIRTYTLNPFNLIKDHRTNMEIGNVQAVLDGELDDLIFACLHWKSKIKE
>NC_008346.1|WP_155814254.1|282039_282792_+|transketolase
MLGEAGSGHTGGSLSAADLVACLYFWEMKLDPKKPDWEDRDRFVLSKGHAAPVLYAALAEKGFFPREYLKTLRKLGSPLQGHPDMRKLAGVEACTGSLGQGISWAVGMALAARIDQRDYRVYALLGDGELEEGMVWEAAMAAAHYRLDNLLALVDNNGLQIDGKIAEVMSPEPIADKFVAFGWNTLEIDGHDHRQIMEALNSARSFKGSPTAIIAHTTKGKGCSFMENRVEWHGTAPNREEMEKALAELA
>NC_008346.1|WP_011639704.1|282836_283772_+|transketolase-family-protein
MKKQATRDAYGQALLELGALYDNIVVLDADLSKSTKTVEFARAYPERFINAGIAEQNMMGMAAGLASCGKVVFASSFAIFATGRAFEQVRNSIAYAKLNVKICATHAGITVGEDGGSHQSVEDIALMRSVPNMTVIVPSDGISTRQALFQLYQHDGPAYLRLGRPAVPQVHDPELDFAIGRAVELRKGKDLSLMACGIMVSKALQAAEILAGEGIEVSVVDILSIKPLDKEMIIRKARESGALLTLEEHSIIGGLGSSICEVVCEHCPVPVTCLGINDLFGQSGSPEELLQYYGLGIEQIVEKARKLLKKK
>NC_008346.1|WP_011639705.1|283847_284531_+|cell-division-ATP-binding-protein-FtsE
MLVQFYNVSKIYSNGVKALDDVSLKIERGEFLFLMGPSGAGKSTLIKLFFREEVPTRGQIFIASRSIVRMKRSEVPPLRRNIGIIFQDFKLLENKTASENIAFAMEVVGANPKEIRQRVAEVIEMVGLKGRENSFPGELSGGEQQRVGIARALANRPLLLIADEPTGNLDIDISREIMELLFDINRKGTTVIMATHARELVKAARKRVILLDKGRVIADNPNGESIV
>NC_008346.1|WP_011639706.1|284527_285412_+|ABC-transporter-permease
MKLRNVLYFWREAWKSLRRNKVLTIASVSTVSICILILGMAVLMTVNAGNVIKKLESDVEMVAFLDRALTRSQISQIEEQISKLDGVKSVKFVSRDTALARLEKSYGNKEYDLKSTLGKNPLPHSFEVKAKNPHDVPRIASKVEKIEGIYKVNYGQGVVERLFAVTKWVRAISLAFIVLLSLGAIFLIATTIRLAIYARRKEIYLMKLVGATDWFIRWPFFIEGILLGTLGALLSILLLAGAYSSLVNNMGSVYFIPLVTGGPILNQLYIALLAVGAILGVLGTYISLNRFLDV

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Crispr_ID: NC_008346_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_2

564720-568858

TypeI

I-C

Consensus_repeat	Method
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CRT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	PILER-CR
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	PILER-CR

61 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NC_008346_2

>merge|NC_008346|2|564720-568858|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCGCACCCCATGCGGGTGCGTGGATTGAAACGTGCCTAGTAGGTGAAGTGGTGTTTGTTATGGTGCGTCGCACCCCATGCGGGTGCGTGGATTGAAACATCATAATAAGAAGCTTCATGGTCGTGACAATTGCAGTCGCACCCCATGCGGGTGCGTGGATTGAAACTATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGGTCGCACCCCATGCGGGTGCGTGGATTGAAACTATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGGTGTCGCACCCCATGCGGGTGCGTGGATTGAAACTATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGGGTCGCACCCCATGCGGGTGCGTGGATTGAAACCGGCAAAAAAATTGCATGGTACTACCATGCAGGGCAGTCGCACCCCATGCGGGTGCGTGGATTGAAACGATATATTGATGGTAAAATTTGTAAACTATGCCCCGTCGTCGCACCCCATGCGGGTGCGTGGATTGAAACCACCCAGACCATGGTGGAACCAATGAACAAATGACCATGTCGCACCCCATGCGGGTGCGTGGATTGAAACTATAATAATAGTAATATAAAAATATTAAGGAGTTGAGTCGCACCCCATGCGGGTGCGTGGATTGAAACCAGCATAAAGGGAATATTTTTTGTTATTATACTTGTCGCACCCCATGCGGGTGCGTGGATTGAAACGGAAATCATAACAGGCTGGCAGTTGGTGAAGACATTTGTCGCACCCCATGCGGGTGCGTGGATTGAAACATATCTTTCAATTTATCACTACTATACTTGTGCCGGGTCGCACCCCATGCGGGTGCGTGGATTGAAACTATCAGATAATAGCCTAACAGATGCCCAAAAAATTGTCGCACCCCATGCGGGTGCGTGGATTGAAACTAAGCTTATAGCATCTTGATTTGCTATTTTTTTAAGTCGCACCCCATGCGGGTGCGTGGATTGAAACCTACTCAAACGAACTTGAAAAAAGCATTGAAGCAGTCGCACCCCATGCGGGTGCGTGGATTGAAACTCAGCATGATATACTTAACTCAAGAGATAAGGAAGTCGCACCCCATGCGGGTGCGTGGATTGAAACCTGGTTTTCGTTTTGTAGTTGGTGGATGTAATTCATTGTCGCACCCCATGCGGGTGCGTGGATTGAAACTAAACCTGTTACCCGGATCACTTAAATCAAACAGGACTGTCGCACCCCATGCGGGTGCGTGGATTGAAACTTTGTCATAATCATCCATCAGGTGATACAATGCCGTCGCACCCCATGCGGGTGCGTGGATTGAAACAAGCTATCCCAACATTAAAAGAAAAAACTAACAAAGTCGCACCCCATGCGGGTGCGTGGATTGAAACACAATTGCCGATAAAACCTATTCAATCCGCTTAAGTCGCACCCCATGCGGGTGCGTGGATTGAAACTTAGAGTGCTAACTAAAAACCTAAAATAAATATAAGTCGCACCCCATGCGGGTGCGTGGATTGAAACTTCATAAATCTTTAAAAAATTTTTTAAAATCTAAGTCGCACCCCATGCGGGTGCGTGGATTGAAACCTTCAAACATTGTTATACCTCCTTGTTAATATCCGTCGCACCCCATGCGGGTGCGTGGATTGAAACTGCGAGAAATGAAAAAATATTGCATTAAATTACCTGTCGCACCCCATGCGGGTGCGTGGATTGAAACAATCGAACAAATTAAAACCCGCTACCGGGAACTAGCGTCGCACCCCATGCGGGTGCGTGGATTGAAACTTTAATACCCTCTATAAGATATATAAGCAACTGTTAGTCGCACCCCATGCGGGTGCGTGGATTGAAACTCTAAGGTCTGTTATGGGTATTTGTTGTAATTGTCGTCGCACCCCATGCGGGTGCGTGGATTGAAACTTTGAAAAATACATAGCATCCAACCTAGTAGGCGGTCGCACCCCATGCGGGTGCGTGGATTGAAACGATAAAAGCGACCGGAAATTTGTAAACCGGGGGCGGTCGCACCCCATGCGGGTGCGTGGATTGAAACAAAAAATGGTAGACCTAACAGCCAGCAAATTCTCAGTCGCACCCCATGCGGGTGCGTGGATTGAAACAATGGTGCGGAAAAGTTTTTGTAGACCGGATAAGTGTCGCACCCCATGCGGGTGCGTGGATTGAAACCGGTCAACATAAAGCAATGTGGTATTTTTTCGGTTAGTCGCACCCCATGCGGGTGCGTGGATTGAAACCTTTTGCCAATTCAATTTTAAGCTGGCCGGACATAGTCGCACCCCATGCGGGTGCGTGGATTGAAACATGTTCTACTCTATATTTTTCAGCTTCTTCCTTTGTGGTCGCACCCCATGCGGGTGCGTGGATTGAAACAAGGAGGTAAATAAATAAATGATAAATAACAGTAGTCGCACCCCATGCGGGTGCGTGGATTGAAACAATGGTGCGGAAAAGTTTTTGTAGACCGGATAAGGTCGCACCCCATGCGGGTGCGTGGATTGAAACTAGTAGTGTTGAGTGCTATAAGGTAAAAGGATTAATTGTCGCACCCCATGCGGGTGCGTGGATTGAAACCATAATAGCTCATAAACAAGCAAAGCATGGCCTATCGTCGCACCCCATGCGGGTGCGTGGATTGAAACGTATTACCTCCCCATTAATTATATTATCATTGTAGTCGCACCCCATGCGGGTGCGTGGATTGAAACTTAACATAATATCACCTGCATATTTACCGATAATTTCGTCGCACCCCATGCGGGTGCGTGGATTGAAACATCATGGACAAGGAGCATAATTTTAGCATTGTTTGGTCGCACCCCATGCGGGTGCGTGGATTGAAACGCCAACCTGACAACCTTTGATGTATTCCATTAATTGTCGCACCCCATGCGGGTGCGTGGATTGAAACAGATATATATTGTAAAAATATTTTATATTGCTCGTCGCACCCCATGCGGGTGCGTGGATTGAAACTTAGGCAATTACAAGTAAAATATAAATATTTAGCTGTCGCACCCCATGCGGGTGCGTGGATTGAAACACCGCAACAAACCATGAAACCCATAAACAATACGGTCGCACCCCATGCGGGTGCGTGGATTGAAACAGTGGTCAGATATGTAAATACAATTGGAATAAGGGTCGCACCCCATGCGGGTGCGTGGATTGAAACAGTGGTCAGATATGTAAATACAATTGGAATAAGGGATGTCGCACCCCATGCGGGTGCGTGGATTGAAACATGTCGTTTTTAGTGCTTACAAATCCCTATTTCTAGTCGCACCCCATGCGGGTGCGTGGATTGAAACAATTGGAATAAGGGATTGCACATAGTTGAATTTATGTCGCACCCCATGCGGGTGCGTGGATTGAAACGGGAAGTCATTTTACTTTAGTGTACTATTACACTAGTCGCACCCCATGCGGGTGCGTGGATTGAAACGGGTAAATTAGTAAGAAAATAATTGCCATTTATGGTCGCACCCCATGCGGGTGCGTGGATTGAAACATAGAACAATTTGAGTATATCACAGCTAAAAAATTAGTCGCACCCCATGCGGGTGCGTGGATTGAAACAGAATTGCAATTGTAAAGCCGATCATAAAATAACGTCGCACCCCATGCGGGTGCGTGGATTGAAACAGCTATTCAAATGACCTTGAACTATCCATAGAAGCGGTCGCACCCCATGCGGGTGCGTGGATTGAAACATATATAAGAGTTTATCGTGGTTTTGATTATGGAGTCGCACCCCATGCGGGTGCGTGGATTGAAACAAAGCATCATATCTCTATCGCTTGTCTCCCCGGTCTTAAGTCGCACCCCATGCGGGTGCGTGGATTGAAACAAAGAGGCGAGAATCCTTGTGATGGGTGCAATATGGTCGCACCCCATGCGGGTGCGTGGATTGAAACTGCTGTATTGCCAGAAGATGTTAGCCAAAATGAAGTCGCACCCCATACGGGTGCGTGGATTGAAACTTGGGTGGGGAAATTCTGACTGTTTACCAGGCTATGTCGCACCCCATGCGGGTGCGTGGATTGAAACTCACAAGTGAGCCGGGTCTTGTCGCCCCGGGTCTCGGTCGCACCCCATGAGGGTGCGTGGATTGAAAC

>NC_008346|2|2|564720-568858|CRISPRCasFinder
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GTGCCTAGTAGGTGAAGTGGTGTTTGTTATGGTGC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATCATAATAAGAAGCTTCATGGTCGTGACAATTGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGGT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CGGCAAAAAAATTGCATGGTACTACCATGCAGGGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GATATATTGATGGTAAAATTTGTAAACTATGCCCCGTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CACCCAGACCATGGTGGAACCAATGAACAAATGACCAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATAATAATAGTAATATAAAAATATTAAGGAGTTGA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CAGCATAAAGGGAATATTTTTTGTTATTATACTT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGAAATCATAACAGGCTGGCAGTTGGTGAAGACATTT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATATCTTTCAATTTATCACTACTATACTTGTGCCGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATCAGATAATAGCCTAACAGATGCCCAAAAAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAAGCTTATAGCATCTTGATTTGCTATTTTTTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTACTCAAACGAACTTGAAAAAAGCATTGAAGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCAGCATGATATACTTAACTCAAGAGATAAGGAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTGGTTTTCGTTTTGTAGTTGGTGGATGTAATTCATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAAACCTGTTACCCGGATCACTTAAATCAAACAGGACT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTGTCATAATCATCCATCAGGTGATACAATGCC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAGCTATCCCAACATTAAAAGAAAAAACTAACAAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ACAATTGCCGATAAAACCTATTCAATCCGCTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAGAGTGCTAACTAAAAACCTAAAATAAATATAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTCATAAATCTTTAAAAAATTTTTTAAAATCTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTTCAAACATTGTTATACCTCCTTGTTAATATCC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TGCGAGAAATGAAAAAATATTGCATTAAATTACCT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATCGAACAAATTAAAACCCGCTACCGGGAACTAGC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTAATACCCTCTATAAGATATATAAGCAACTGTTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCTAAGGTCTGTTATGGGTATTTGTTGTAATTGTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTGAAAAATACATAGCATCCAACCTAGTAGGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GATAAAAGCGACCGGAAATTTGTAAACCGGGGGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAAAATGGTAGACCTAACAGCCAGCAAATTCTCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAGT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CGGTCAACATAAAGCAATGTGGTATTTTTTCGGTTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTTTTGCCAATTCAATTTTAAGCTGGCCGGACATA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATGTTCTACTCTATATTTTTCAGCTTCTTCCTTTGTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAGGAGGTAAATAAATAAATGATAAATAACAGTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAGTAGTGTTGAGTGCTATAAGGTAAAAGGATTAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CATAATAGCTCATAAACAAGCAAAGCATGGCCTATC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GTATTACCTCCCCATTAATTATATTATCATTGTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAACATAATATCACCTGCATATTTACCGATAATTTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATCATGGACAAGGAGCATAATTTTAGCATTGTTTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GCCAACCTGACAACCTTTGATGTATTCCATTAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGATATATATTGTAAAAATATTTTATATTGCTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAGGCAATTACAAGTAAAATATAAATATTTAGCT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ACCGCAACAAACCATGAAACCCATAAACAATACG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGTGGTCAGATATGTAAATACAATTGGAATAAGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGTGGTCAGATATGTAAATACAATTGGAATAAGGGAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATGTCGTTTTTAGTGCTTACAAATCCCTATTTCTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATTGGAATAAGGGATTGCACATAGTTGAATTTAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGGAAGTCATTTTACTTTAGTGTACTATTACACTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGGTAAATTAGTAAGAAAATAATTGCCATTTATG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATAGAACAATTTGAGTATATCACAGCTAAAAAATTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGAATTGCAATTGTAAAGCCGATCATAAAATAAC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGCTATTCAAATGACCTTGAACTATCCATAGAAGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATATATAAGAGTTTATCGTGGTTTTGATTATGGA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAGCATCATATCTCTATCGCTTGTCTCCCCGGTCTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAGAGGCGAGAATCCTTGTGATGGGTGCAATATG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TGCTGTATTGCCAGAAGATGTTAGCCAAAATGAA
GTCGCACCCCATACGGGTGCGTGGATTGAAAC	TTGGGTGGGGAAATTCTGACTGTTTACCAGGCTAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCACAAGTGAGCCGGGTCTTGTCGCCCCGGGTCTCG
GTCGCACCCCATGAGGGTGCGTGGATTGAAAC

>NC_008346|2|1|564720-568858|CRT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GTGCCTAGTAGGTGAAGTGGTGTTTGTTATGGTGC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATCATAATAAGAAGCTTCATGGTCGTGACAATTGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGGT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CGGCAAAAAAATTGCATGGTACTACCATGCAGGGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GATATATTGATGGTAAAATTTGTAAACTATGCCCCGTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CACCCAGACCATGGTGGAACCAATGAACAAATGACCAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATAATAATAGTAATATAAAAATATTAAGGAGTTGA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CAGCATAAAGGGAATATTTTTTGTTATTATACTT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGAAATCATAACAGGCTGGCAGTTGGTGAAGACATTT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATATCTTTCAATTTATCACTACTATACTTGTGCCGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATCAGATAATAGCCTAACAGATGCCCAAAAAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAAGCTTATAGCATCTTGATTTGCTATTTTTTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTACTCAAACGAACTTGAAAAAAGCATTGAAGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCAGCATGATATACTTAACTCAAGAGATAAGGAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTGGTTTTCGTTTTGTAGTTGGTGGATGTAATTCATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAAACCTGTTACCCGGATCACTTAAATCAAACAGGACT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTGTCATAATCATCCATCAGGTGATACAATGCC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAGCTATCCCAACATTAAAAGAAAAAACTAACAAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ACAATTGCCGATAAAACCTATTCAATCCGCTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAGAGTGCTAACTAAAAACCTAAAATAAATATAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTCATAAATCTTTAAAAAATTTTTTAAAATCTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTTCAAACATTGTTATACCTCCTTGTTAATATCC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TGCGAGAAATGAAAAAATATTGCATTAAATTACCT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATCGAACAAATTAAAACCCGCTACCGGGAACTAGC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTAATACCCTCTATAAGATATATAAGCAACTGTTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCTAAGGTCTGTTATGGGTATTTGTTGTAATTGTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTGAAAAATACATAGCATCCAACCTAGTAGGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GATAAAAGCGACCGGAAATTTGTAAACCGGGGGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAAAATGGTAGACCTAACAGCCAGCAAATTCTCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAGT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CGGTCAACATAAAGCAATGTGGTATTTTTTCGGTTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTTTTGCCAATTCAATTTTAAGCTGGCCGGACATA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATGTTCTACTCTATATTTTTCAGCTTCTTCCTTTGTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAGGAGGTAAATAAATAAATGATAAATAACAGTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAGTAGTGTTGAGTGCTATAAGGTAAAAGGATTAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CATAATAGCTCATAAACAAGCAAAGCATGGCCTATC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GTATTACCTCCCCATTAATTATATTATCATTGTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAACATAATATCACCTGCATATTTACCGATAATTTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATCATGGACAAGGAGCATAATTTTAGCATTGTTTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GCCAACCTGACAACCTTTGATGTATTCCATTAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGATATATATTGTAAAAATATTTTATATTGCTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAGGCAATTACAAGTAAAATATAAATATTTAGCT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ACCGCAACAAACCATGAAACCCATAAACAATACG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGTGGTCAGATATGTAAATACAATTGGAATAAGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGTGGTCAGATATGTAAATACAATTGGAATAAGGGAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATGTCGTTTTTAGTGCTTACAAATCCCTATTTCTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATTGGAATAAGGGATTGCACATAGTTGAATTTAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGGAAGTCATTTTACTTTAGTGTACTATTACACTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGGTAAATTAGTAAGAAAATAATTGCCATTTATG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATAGAACAATTTGAGTATATCACAGCTAAAAAATTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGAATTGCAATTGTAAAGCCGATCATAAAATAAC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGCTATTCAAATGACCTTGAACTATCCATAGAAGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATATATAAGAGTTTATCGTGGTTTTGATTATGGA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAGCATCATATCTCTATCGCTTGTCTCCCCGGTCTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAGAGGCGAGAATCCTTGTGATGGGTGCAATATG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TGCTGTATTGCCAGAAGATGTTAGCCAAAATGAA
GTCGCACCCCATACGGGTGCGTGGATTGAAAC	TTGGGTGGGGAAATTCTGACTGTTTACCAGGCTAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCACAAGTGAGCCGGGTCTTGTCGCCCCGGGTCTCG
GTCGCACCCCATGAGGGTGCGTGGATTGAAAC

>NC_008346|2|1|564991-565298|PILER-CR
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CGGCAAAAAAATTGCATGGTACTACCATGCAGGGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GATATATTGATGGTAAAATTTGTAAACTATGCCCCGTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CACCCAGACCATGGTGGAACCAATGAACAAATGACCAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAACTATAATAATAGTAATATAAAAATATTAAGGAGTTGAGTCGCACCCCATGCGGGTGCGTGGATTGAAACCAGCATAAAGGGAATATTTTTTGTTATTATACTTGTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGAAATCATAACAGGCTGGCAGTTGGTGAAGACATTT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATATCTTTCAATTTATCACTACTATACTTGTGCCGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATCAGATAATAGCCTAACAGATGCCCAAAAAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAAGCTTATAGCATCTTGATTTGCTATTTTTTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTACTCAAACGAACTTGAAAAAAGCATTGAAGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCAGCATGATATACTTAACTCAAGAGATAAGGAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTGGTTTTCGTTTTGTAGTTGGTGGATGTAATTCATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAAACCTGTTACCCGGATCACTTAAATCAAACAGGACT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTGTCATAATCATCCATCAGGTGATACAATGCC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAGCTATCCCAACATTAAAAGAAAAAACTAACAAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ACAATTGCCGATAAAACCTATTCAATCCGCTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAGAGTGCTAACTAAAAACCTAAAATAAATATAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTCATAAATCTTTAAAAAATTTTTTAAAATCTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTTCAAACATTGTTATACCTCCTTGTTAATATCC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TGCGAGAAATGAAAAAATATTGCATTAAATTACCT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATCGAACAAATTAAAACCCGCTACCGGGAACTAGC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTAATACCCTCTATAAGATATATAAGCAACTGTTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCTAAGGTCTGTTATGGGTATTTGTTGTAATTGTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTGAAAAATACATAGCATCCAACCTAGTAGGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GATAAAAGCGACCGGAAATTTGTAAACCGGGGGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAAAATGGTAGACCTAACAGCCAGCAAATTCTCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAGT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CGGTCAACATAAAGCAATGTGGTATTTTTTCGGTTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTTTTGCCAATTCAATTTTAAGCTGGCCGGACATA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATGTTCTACTCTATATTTTTCAGCTTCTTCCTTTGTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAGGAGGTAAATAAATAAATGATAAATAACAGTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAGTAGTGTTGAGTGCTATAAGGTAAAAGGATTAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CATAATAGCTCATAAACAAGCAAAGCATGGCCTATC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GTATTACCTCCCCATTAATTATATTATCATTGTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAACATAATATCACCTGCATATTTACCGATAATTTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATCATGGACAAGGAGCATAATTTTAGCATTGTTTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GCCAACCTGACAACCTTTGATGTATTCCATTAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGATATATATTGTAAAAATATTTTATATTGCTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAGGCAATTACAAGTAAAATATAAATATTTAGCT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ACCGCAACAAACCATGAAACCCATAAACAATACG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGTGGTCAGATATGTAAATACAATTGGAATAAGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGTGGTCAGATATGTAAATACAATTGGAATAAGGGAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATGTCGTTTTTAGTGCTTACAAATCCCTATTTCTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATTGGAATAAGGGATTGCACATAGTTGAATTTAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGGAAGTCATTTTACTTTAGTGTACTATTACACTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGGTAAATTAGTAAGAAAATAATTGCCATTTATG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATAGAACAATTTGAGTATATCACAGCTAAAAAATTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGAATTGCAATTGTAAAGCCGATCATAAAATAAC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGCTATTCAAATGACCTTGAACTATCCATAGAAGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATATATAAGAGTTTATCGTGGTTTTGATTATGGA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAGCATCATATCTCTATCGCTTGTCTCCCCGGTCTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAGAGGCGAGAATCCTTGTGATGGGTGCAATATG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TGCTGTATTGCCAGAAGATGTTAGCCAAAATGAA
GTCGCACCCCATACGGGTGCGTGGATTGAAAC	TTGGGTGGGGAAATTCTGACTGTTTACCAGGCTAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCACAAGTGAGCCGGGTCTTGTCGCCCCGGGTCTCG


>NC_008346|2|2|565401-568858|PILER-CR
	TATTAAAGCGACCGGAAATTTGTAAACCGGGGGTGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CGGCAAAAAAATTGCATGGTACTACCATGCAGGGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GATATATTGATGGTAAAATTTGTAAACTATGCCCCGTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CACCCAGACCATGGTGGAACCAATGAACAAATGACCAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAACTATAATAATAGTAATATAAAAATATTAAGGAGTTGAGTCGCACCCCATGCGGGTGCGTGGATTGAAACCAGCATAAAGGGAATATTTTTTGTTATTATACTTGTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGAAATCATAACAGGCTGGCAGTTGGTGAAGACATTT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATATCTTTCAATTTATCACTACTATACTTGTGCCGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TATCAGATAATAGCCTAACAGATGCCCAAAAAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAAGCTTATAGCATCTTGATTTGCTATTTTTTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTACTCAAACGAACTTGAAAAAAGCATTGAAGCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCAGCATGATATACTTAACTCAAGAGATAAGGAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTGGTTTTCGTTTTGTAGTTGGTGGATGTAATTCATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAAACCTGTTACCCGGATCACTTAAATCAAACAGGACT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTGTCATAATCATCCATCAGGTGATACAATGCC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAGCTATCCCAACATTAAAAGAAAAAACTAACAAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ACAATTGCCGATAAAACCTATTCAATCCGCTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAGAGTGCTAACTAAAAACCTAAAATAAATATAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTCATAAATCTTTAAAAAATTTTTTAAAATCTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTTCAAACATTGTTATACCTCCTTGTTAATATCC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TGCGAGAAATGAAAAAATATTGCATTAAATTACCT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATCGAACAAATTAAAACCCGCTACCGGGAACTAGC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTAATACCCTCTATAAGATATATAAGCAACTGTTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCTAAGGTCTGTTATGGGTATTTGTTGTAATTGTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTTGAAAAATACATAGCATCCAACCTAGTAGGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GATAAAAGCGACCGGAAATTTGTAAACCGGGGGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAAAATGGTAGACCTAACAGCCAGCAAATTCTCA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAGT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CGGTCAACATAAAGCAATGTGGTATTTTTTCGGTTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CTTTTGCCAATTCAATTTTAAGCTGGCCGGACATA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATGTTCTACTCTATATTTTTCAGCTTCTTCCTTTGTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAGGAGGTAAATAAATAAATGATAAATAACAGTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATGGTGCGGAAAAGTTTTTGTAGACCGGATAAG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TAGTAGTGTTGAGTGCTATAAGGTAAAAGGATTAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	CATAATAGCTCATAAACAAGCAAAGCATGGCCTATC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GTATTACCTCCCCATTAATTATATTATCATTGTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAACATAATATCACCTGCATATTTACCGATAATTTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATCATGGACAAGGAGCATAATTTTAGCATTGTTTG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GCCAACCTGACAACCTTTGATGTATTCCATTAATT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGATATATATTGTAAAAATATTTTATATTGCTC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TTAGGCAATTACAAGTAAAATATAAATATTTAGCT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ACCGCAACAAACCATGAAACCCATAAACAATACG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGTGGTCAGATATGTAAATACAATTGGAATAAGG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGTGGTCAGATATGTAAATACAATTGGAATAAGGGAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATGTCGTTTTTAGTGCTTACAAATCCCTATTTCTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AATTGGAATAAGGGATTGCACATAGTTGAATTTAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGGAAGTCATTTTACTTTAGTGTACTATTACACTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	GGGTAAATTAGTAAGAAAATAATTGCCATTTATG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATAGAACAATTTGAGTATATCACAGCTAAAAAATTA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGAATTGCAATTGTAAAGCCGATCATAAAATAAC
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AGCTATTCAAATGACCTTGAACTATCCATAGAAGCG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	ATATATAAGAGTTTATCGTGGTTTTGATTATGGA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAGCATCATATCTCTATCGCTTGTCTCCCCGGTCTTAA
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	AAAGAGGCGAGAATCCTTGTGATGGGTGCAATATG
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TGCTGTATTGCCAGAAGATGTTAGCCAAAATGAA
GTCGCACCCCATACGGGTGCGTGGATTGAAAC	TTGGGTGGGGAAATTCTGACTGTTTACCAGGCTAT
GTCGCACCCCATGCGGGTGCGTGGATTGAAAC	TCACAAGTGAGCCGGGTCTTGTCGCCCCGGGTCTCG
GTCGCACCCCATGAGGGTGCGTGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_011639923.1\|563222_564251_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_008346.1\|WP_011639920.1\|559878_561681_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|187887
NC_008346.1\|WP_049750085.1\|562490_563222_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|187768
NC_008346.1\|WP_011639925.1\|569049_569346_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226079
NC_008346.1\|WP_041427717.1\|557044_559195_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_008346.1\|WP_011639931.1\|577550_579422_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NC_008346.1\|WP_081424762.1\|556248_556494_+\|DUF4911-domain-containing-protein	unknown	unknown	gnl\|CDD\|379806
NC_008346.1\|WP_011639924.1\|564263_564554_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_008346.1\|WP_011639494.1\|571380_572886_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NC_008346.1\|WP_011639926.1\|569375_570428_+\|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl\|CDD\|225635
NC_008346.1\|WP_011639493.1\|570661_571384_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NC_008346.1\|WP_011639916.1\|553644_554682_+\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|376862
NC_008346.1\|WP_011639930.1\|575667_577374_+\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
NC_008346.1\|WP_011639928.1\|573426_573882_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239530
NC_008346.1\|WP_011639929.1\|574112_575252_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173847
NC_008346.1\|WP_011639919.1\|559219_559882_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
NC_008346.1\|WP_011639921.1\|561664_562531_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_008346.1\|WP_011639927.1\|573064_573274_+\|DUF4911-domain-containing-protein	unknown	unknown	gnl\|CDD\|379806
NC_008346.1\|WP_011639932.1\|579437_580460_+\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|274090
NC_008346.1\|WP_011639917.1\|555023_556259_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_011639923.1\|563222_564251_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_008346.1\|WP_011639920.1\|559878_561681_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0
NC_008346.1\|WP_049750085.1\|562490_563222_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	2.42871e-27
NC_008346.1\|WP_011639925.1\|569049_569346_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226079	COG3549, HigB, Plasmid maintenance system killer protein [General function prediction only].	3.32421e-07
NC_008346.1\|WP_041427717.1\|557044_559195_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.41205e-56
NC_008346.1\|WP_011639931.1\|577550_579422_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_008346.1\|WP_081424762.1\|556248_556494_+\|DUF4911-domain-containing-protein	gnl\|CDD\|379806	pfam16256, DUF4911, Domain of unknown function (DUF4911). This family consists of uncharacterized proteins around 75 residues in length and is mainly found in various Thermotogav species. The function of this family is unknown.	5.41234e-13
NC_008346.1\|WP_011639924.1\|564263_564554_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.7459e-34
NC_008346.1\|WP_011639494.1\|571380_572886_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	6.05301e-27
NC_008346.1\|WP_011639926.1\|569375_570428_+\|HigA-family-addiction-module-antidote-protein	gnl\|CDD\|225635	COG3093, VapI, Plasmid maintenance system antidote protein [General function prediction only].	8.53259e-16
NC_008346.1\|WP_011639493.1\|570661_571384_-\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	1.71955e-59
NC_008346.1\|WP_011639916.1\|553644_554682_+\|endolytic-transglycosylase-MltG	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	7.68823e-117
NC_008346.1\|WP_011639930.1\|575667_577374_+\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	2.05306e-103
NC_008346.1\|WP_011639928.1\|573426_573882_-\|hypothetical-protein	gnl\|CDD\|239530	cd03446, MaoC_like, MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.	3.95835e-18
NC_008346.1\|WP_011639929.1\|574112_575252_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	1.09127e-172
NC_008346.1\|WP_011639919.1\|559219_559882_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	3.66815e-114
NC_008346.1\|WP_011639921.1\|561664_562531_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.3173e-159
NC_008346.1\|WP_011639927.1\|573064_573274_+\|DUF4911-domain-containing-protein	gnl\|CDD\|379806	pfam16256, DUF4911, Domain of unknown function (DUF4911). This family consists of uncharacterized proteins around 75 residues in length and is mainly found in various Thermotogav species. The function of this family is unknown.	3.36158e-09
NC_008346.1\|WP_011639932.1\|579437_580460_+\|J-domain-containing-protein	gnl\|CDD\|274090	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.	9.7739e-114
NC_008346.1\|WP_011639917.1\|555023_556259_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	3.94149e-119

>NC_008346.1|WP_011639924.1|564263_564554_+|CRISPR-associated-endonuclease-Cas2
MMVLITYDVNTTDKDGQKRLRKVAKKCVDYGQRVQNSVFECLLEPAQFVMLKNELEAIIDANKDSLRYYMLGSNWKRRVEHVGAKETYDPEGVMVL
>NC_008346.1|WP_011639923.1|563222_564251_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRRLLNTLYVTTPDSYLAREGENILIRLEEKIVFRIPSHNIEAIVYFGYPGASPSLLGLCAEKGITVSFFSPNGRFLARVEGPQTGNVLLRRKQYRMADEENQVPVLAKYFIAAKILNSRAVLQRGRRDHPDKVGDSIERSIALLAGSVKKVFDSENLNDIRGLEGDAAQRYFSEVDNLILEQKQDFFMAARSRRPPLDNVNALLSFFYTLLVHECRAALESVGLDPAVGFLHRDRPGRPSLALDLMEELRPYLGDRMVLSLINRKQINKDDFITKENGAVYVLPDTRKMLLTVWQKRKQEEIIHPYLEEKIPIGLLPYTQALLLARFLRGDLDAYPAFIWK
>NC_008346.1|WP_049750085.1|562490_563222_+|CRISPR-associated-protein-Cas4
MRFPKELKSLSYSKKYREDELLAISGLQHIAFCERQWALIHIEQQWDENLRTAEGRILHERVHDQEYKTYKPGAIIVRGMPLQSFGLGLYGVADLVEFVEQQGGAGISLPDRAGLYLPRPVEYKRGKSKKGDYDRIQLCAQAMCLEEMLHCDIEEGDLYYGETRRREKVKLDSELKEEVIRLSQHMHRLYSEEVTPKPDMRLSVCKSCSVMNVCMPRIRLKSSVRSYWNKALEELSPVENEVR
>NC_008346.1|WP_011639921.1|561664_562531_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MATTIKNRYEFVLFFDVENGNPNGDPDADNMPRIDPETSFGLVSDVCIKRKIRNYVALLKENEDDYQIYVQEKAVLNNQHKKAYEHFKIKPESKKLPKDTAQAEAITQFMCKNFYDIRTFGAVMTTEVNCGQVRGPVQLGFSRSLDPIVPQEITITRMAVTNERDLEKERTMGRKHIVNYALYRAEGFISAPLADKTGFSEEDLELLWDALINMFDHDRSAARGKMSSRKLYVFKHDSKLGNAPASILFDAITVKKINGNKPVRNFSDYEISVTGNEIPQGVEVLELL
>NC_008346.1|WP_011639920.1|559878_561681_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MIIQSLQEYYERLDKDPLSGIAPMGYSKAKVAFAFNLSENGELLDIFPLYEVKGNKKISREMLVPEQVKRSSGVNANCLCDNSSYVLGIDNKGKEQRSRDCFMAFKELHNEILTGVVDEGAKAVLVFLNSREAGQFSEKTLQDNMEQLLEGGNIVFRLDGADGYIHERAPIKKAWEKYQETDKTDAYIAQCLVSGEKGPVALLHPSIKGVRGAQSSGASIVSFNDDAYVSYGKKQSYNAPVSVNTTFAYTTALNYLLSNPKNRIKIGDTTVVFWAEREPEENLIAAFFDPPEEPKEQEMAQIDHASIQKIRDILMQLRDGKKPPNVDIDERTRFYILGLAPNAARISIRYYYQGEFGTLMKNVGLHYADMLVVLPKDYRPVFPPVWRILMETATGGNTENIPPILGGALMRTILSGGAYPQSLYSVILSRIRADSIVNPIRTGIIKACLLRQFRINGQKEKEDVIKMSLNPENTAPGYLLGRLFALLEIAQQDSADTKLNATIVDRCYGTASTTPAAIFPMLVKLSKHHLKKIKSTKPGLGYALDNKMQEVVNVLDDTKGLPRYLNLDEQGLFVLGYYQQKQDWYTSKEKQGGIIDGDNN
>NC_008346.1|WP_011639919.1|559219_559882_+|type-I-C-CRISPR-associated-protein-Cas5
MGYGVKLKVWGDFACFTRPEMKVERVSYDVITPSAARGILEAIHWKPAIRWVIERITILNEIKFDSFRRNELSGRISAVTMKSAMNGREVLLRQTIEDNRQQRATLLLRNVAYIIEAHFEMTEKAEADDSEEKHYNMFLRRARQGQCFHRPYFGCREFPVEFALLEEEVPPSHYRDLEEKDLGWILLDIDFKNDMTPLFFRAIMRHGVIEVPPLYEEVNA
>NC_008346.1|WP_041427717.1|557044_559195_+|CRISPR-associated-helicase/endonuclease-Cas3
MKYYAHSTEGEEENWQLLKKHLENVSHRAGIYASCFGAEEWGELAGLLHDGGKYSDDFQDKLKGMNLNVDHSTAGAQIASELYGNRGCLLAYVSAGHHGGLPNGGSDADEASLMGRLARNLPNYDAFYKEILLQPQLPRLNLGRSDKPGFSLSFFVRMLFSCLVDADFLDTEKFYTKEKNEIRKKFPDIKTLNYKLEQYIYKISKKAKSPIIKRERAHVRACCRQAAKKEKGLFSLSVPTGGGKTLSSLEFALRHACKHGMERVIYAVPFTSIIEQNAAVFREALGDDAVLEHHRNYDFEEDENNPNYKHRLAAENWDAPVIVTTNVQFFESLLAYKPSRCRKLHNIANSIVILDEAQTLPDRLLLPCLAILEELLLRYGATIVLCTATQPHLEKLWSKELQATEIIPDSERLYEVLSKRVTVRTAGILKDEELAKKLAAQKQVLCIVNTRKHARTLYKLLPEAEGNYHLSAYMYPKHRSDKIAEIRQRLAEGRTCRVISTQLIEAGVDVDFPVVYRAIAGIDAIAQAAGRCNREGIGGQGEVWVFIPEQGVPEGWFQRMAALGEKVLHKYDDPLSPQAIKSFFELRFDLAGEQLDELGILKDFEECASKLLFPFRDVAEKFRFIDDISVPIVIAIDNECKDIIKKAAYSDNPGGLARSLQRYTVGITPWEAIAYEKAGGIRKVAGLFNVMEEVNNYDDNMGLLPLSNVETDIYVV
>NC_008346.1|WP_081424762.1|556248_556494_+|DUF4911-domain-containing-protein
MKDKIFLRLIPQRIDLLTKIIEAYDHLGVVSTIDSGSGLVIIRGSEDTIPEIKEILNNLPFPVEVLNLDETILPAPVKARE
>NC_008346.1|WP_011639917.1|555023_556259_+|U32-family-peptidase
MQGPELVLPAGTLEKLKTAVLFGADAVYFAGKEFGLRAYAGNLSRAEIAEGLAFAHSRKKKAYLAVNILAHNQDMHKLPAYLEEMASLQPDGFIISDLGVLRLAQKYAPSIPLTISTQANISNYEAACFFQDLGARRIVLARELKLGEIEEIKKKSSVEIEIFIHGAMCVSYSGRCLLSYYMTGRSANQGACAHPCRYRYALVEEKRPGEYFGIEEDERGSYILNSRDLCLLEYIPRLLEAGVDALKVEGRMKSPLYLASVASVYRQAIDRYRERTTPFTAEELSVWMAELHKTATRPFTSAFIGEEEDRAQDIDKEEISLRAQFCAIVTGYREQEGLIEVEQRANFGCGDYLEFLLPGGELLGFVLEKLYDEDLAVLDRARHPQQKVLIPFDHALPEFSILRKGGTVNQG
>NC_008346.1|WP_011639916.1|553644_554682_+|endolytic-transglycosylase-MltG
MSEIKLRLEKPKVVAIILAVLFIILAGVFFTGQMIARQYQPVDPSDKTMVDIVIPEKTGARQVADLLYYERLIHKQSVFLAYCQKNGYDSSLKAGHYRFSRSQSLKEIVDDLVQGRIVNISFTIPEGYTLEQIGRLLIKKQLCSQEEWNMSIRQDYDFAFLKALPLENENRLEGFLYPETYFVPEDYNCQQVIVLMLNNFEQVWQKKFAEQAQAKNWSVYHTITLASLIEKEAQVPEERAMIAGVILNRLNAGMLLQIDASVLYALQRHKELVTYADLEVNSPYNTYKYAGLPPGPIACPGEASINAALNPKEHSYYYYVAKGDGSHFFSRTYREHLQAQEKYGQ
>NC_008346.1|WP_011639925.1|569049_569346_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MQIEYKSRGIEKVCTNAHEAEKKHGKNMAAKIHQRIDEITAADSVEMLIQYKIGGCHILKGDRKKQYAMVLIQPYRLVFEMKGSEIQIVRVIEIIDYH
>NC_008346.1|WP_011639926.1|569375_570428_+|HigA-family-addiction-module-antidote-protein
MVRSRTIIASPPGATIKEQLVDRGMSQKEFARRMDMSEKHISRLINGEVQLTPDMAMRLEMVLGAPAQFWSRLESVYREKLAKANAENEMDADIEIAKKFPYKEMSKNGWVPETSKAKEKVVHLRKHFEVVQLGLLQGTLIPGIACRRLADHKKADYALYAWAQKAKLEARHIDTKPININKLSNIIPHIRKMTRENPGIFCGELVSMLADCGIAIVFLPHIGGSFLHGATFYDGGKIVMGLTVRGKDADRFWFSLFHEFAHIIYGHIGQPNGTSDADESAADEFAKETLIPSKEFNSFIAKKDFSKSSLVQFANVVGIDAGIVVGRLQKEGYIEYSWYNDLKTKYKITA
>NC_008346.1|WP_011639493.1|570661_571384_-|ATP-binding-protein
MKELIKDYCKQLRWGNSIVQNYADIKADTHEEFLAKLLEIEVKGRELNRKNRCLRQAGFDVIKTFNGYSFDHIEIPASIPLDDLKTAALLKNRENLILYGPVGTGKTHMATAIGVEACNQGKKVGFYRTSTLVNELNDAQNAGNLGKMLKQLAKLDLLICDEWGYIPLDRQGAQLLFQVVADCYEKRSIIITTNLEFSKWNGIFYDEKLTSAIIDRLIHHSHLLVFGGQSYRLTHSTIRK
>NC_008346.1|WP_011639494.1|571380_572886_-|IS21-family-transposase
MLTMIQQYHIKHLNFHKGKSLRSIAEETGHDFRTVKKYAEQTDFNEIRKPKRGRPSKLDPVKPIIDAWLKEDLNRPVKQRHTARRIYDRLCDEHQDIFNACERTVRTYVSARKKELYGEEEGYLPLEHPAGEAQVDFGEIVMIEQGQKVKGYELILSLPYSNAGYPQIFRGQNQECLLTGLKDIFEYLEHVPRIIWFDNMSAAVAGIGEKGERKLVDQFYRFALHYGFKPQFCNPGKGHEKGHVENKVGYSRRNYFVPEPSFSDIEEFNQGLFAVAEKDHCRKHYRKGRVINELLQDDLTAMLPLPAKPFTIGRMQKLSANKYGKVCVDTNVYSASPQVANKELYMRLGAHQVELLNEQYQPIVKHKRLYGQNQELMDWLPYLTTLAKRPNALKYTGFYRELPDPWQDYFNNLDYAEKKKSLNLLVRMITETDMDTATICLLETLDSGKADADSILLSYRRLTEPTFNDFLPLLSAGINSPAIYTPDLTCYDTFLKAGECR
>NC_008346.1|WP_011639927.1|573064_573274_+|DUF4911-domain-containing-protein
MQTTAVYACEAYDHLGVVSTIESGSGLVIIRGTEDTIPEIREILDNLPFPVEVLDFNETEFPALVKARE
>NC_008346.1|WP_011639928.1|573426_573882_-|hypothetical-protein
MSSVAAGTKIPCRVSRTLDVGDFSILHQLTWFNMAVHSNSEYAKGTWFKERSLAGPIIFTVADGLVHNADNIAELLAKDGYEIYAYIGVDNVKITSPVLFGDTLTADAEVVDFRPTKNPRMNLFIYKNKTYNQRGEQVIEYQTTMLAQKIE
>NC_008346.1|WP_011639929.1|574112_575252_-|acyl-CoA-dehydrogenase-family-protein
MNFMLSEEQELIRSNAREFALKYIEPVATKIDQESRHPVEVFDKLAELDMMGISYPSEYGGGGAEFLTTMIVTEELARSCATTGFLHGYSYGLIGHPILTFGNEEQKQKWMPGLAAGKLVGSFALTEPGAGTDVSSATTTAVKKGDKYILNGTKTFITNAILADVFVVFAYTDRSAGAKGMSCFLVPQGSSGLNVGQHFDKMGVRGSQTSEVVFKDCVVAADCMLGKEGDGFKIAMSALDVGRIGIAAMSTGITQGCLDESIKYSKERVQFKKPIASQQAIQWFIANMATDIDAARFLYMNAAFIKDQGKPFSVAASKAKLFCSECAARHTTKAVQIQGGYGFMKGAKVERFYRDVKLTEIGEGTSEAQRMIIAGSVLR
>NC_008346.1|WP_011639930.1|575667_577374_+|penicillin-binding-protein-2
MSLRRLYLLMSFFLLLYMILVLRIAYFQVIKGQDLAAQATAMRSQGIRLSEYSRGEILDRNYQPLTGSYTSTALYGLPAGMRSNRSVSDKVYGRDTLQVTGEILGQILDKQDSKAIQEQLRLAAKNGTTFVRIASDLSEAEVQRVISHNLPGITVAPLIKRYRQDGFCCHVLGYVGGYQNNEGQAGIEKRYNALLQKGSSPQELLSVYDARGALIKGLNFKFYEEEDRARGSVVLTIDKRIQEIVEEEISAQVKSGAVVVMDVDSREVLAMASRPSFNPYHIEYLLKHDQNSSLINRALSRYHPGSLFKILVTTAALEENLVSERDKFHCSGKYVFNETQSTSCWKEEGHGELSFAQAFACSCNPSFIEVGQRLGREKLLTYVDKLHLCDETLLGYAYHPGSYVRINPGKIALSNACLGQEGVMLSPLQISSLLATVADDGLWQAPSLLRYTINSKGERSRIASSRKERVISPETAGKVQELMELVVSEGTGKNAALAEIKVAGKTASSETGNWKEDGEQSLDTWFGGYFPADNPRWVVLVLVQEGESGAVDAAPVFKNIAREMLKIL
>NC_008346.1|WP_011639931.1|577550_579422_+|molecular-chaperone-DnaK
MAKAVGIDLGTTNSVVAIIEAGDPVVIVNAEGNRTTPSVVAFKDNNERLVGQIARRQGALNPENTFYSVKRFMGRRYSEVESERKLLPYTVVSGPNDAVRFKSRDKLLAPEEISAMVLKKLVEDASQYLGEKVKDAVITVPAYFNDAQRQATKDAGRIAGLNVLRIINEPTAAALAYGLDKKANQTILVFDLGGGTFDVSILEVGDGVFEVKSTNGDTHLGGDNFDKAIVDWLAEEFKKDYGIDLRKDKQALQRLVETAEKAKIELSSVLETSISLPFITADASGAKHLDMKLSRAKFEDLIHKDLERLRGPVKAALDDARLSARDIDEVILVGGSTRVPAVQKLVRELNGKEPNLGVNPDEVVAVGAAIQAGVLAGEVRDVLLLDVTPLSLGVETMGGIMTRIIERNTTIPARRSEIFSTAEDKQPAVDIHVLQGEREMARDNRSLGQFKLEGITPAPRGVPQIEVSFDIDANGILTVSARDQATGKEQSVTISGSSNLDKAEVDRMVKDAQTYSEEDKKRRQEVEVMNQGDSLCYTVERKLKAVGEQLPLHEKARIEELLQELKKVLEEKAGLDKLKELIDELGQAAYSLDNIEPAAAGPDRSGPAAEGNAEVVDAEFEEN
>NC_008346.1|WP_011639932.1|579437_580460_+|J-domain-containing-protein
MAVKYLDYYKILGVERDADAKKIKAAYRKLARKWHPDLHSGKKREEAEEKIKEINEAYEVLSDPEKKALYDRLGPNWKNGERVDSSGFGDGVFYRSSNIDPEDLQGFSEFFSSLFGAEPGRQSRRASYRSAPVRGQDIESTIELSLEEAYHGLSKSITLSTAAACPECQGSGFVGRGFCRRCGGTGSISEARTLQVRIPPGVHEGSSIRLKGQGGEGLGGAERGDLYLQVHILPHPVFTLRGRDLETEITLRPEQAVLGDRVTVATLDRQLTLKVPPGSRSGQKLRLKGKGMPARQGENGDLYARIKIDLPRDLSEEEKELYRQLAELRAPRQAERGVAE

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Crispr_ID: NC_008346_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_3

774767-774858

Orphan

Consensus_repeat	Method
GGGATAACACAAAAGAACTGTCCCCTTGTGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008346_3

>merge|NC_008346|3|774767-774858|CRISPRCasFinder
GGGATAACACAAAAGAACTGTCCCCTTGTGTCTCCCTGTCATGGGAAGGGGAGATACGTGGGGATAACACAAAAGAACTGTCCCCTTGTGTC

>NC_008346|3|3|774767-774858|CRISPRCasFinder
GGGATAACACAAAAGAACTGTCCCCTTGTGTC	TCCCTGTCATGGGAAGGGGAGATACGTG
GGGATAACACAAAAGAACTGTCCCCTTGTGTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_041427349.1\|779961_780582_+\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|180312
NC_008346.1\|WP_011640109.1\|777452_778901_+\|menaquinone-biosynthesis-decarboxylase	unknown	unknown	gnl\|CDD\|163413
NC_008346.1\|WP_011640112.1\|780690_781659_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|131795
NC_008346.1\|WP_011640106.1\|774143_774524_+\|S-adenosylmethionine-decarboxylase-proenzyme	unknown	unknown	gnl\|CDD\|235105
NC_008346.1\|WP_011640105.1\|769283_773750_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372986
NC_008346.1\|WP_155814119.1\|767709_767865_+\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011640103.1\|767116_767551_-\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011640113.1\|781676_782528_+\|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|376413
NC_008346.1\|WP_011640104.1\|768115_769111_-\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|183400
NC_008346.1\|WP_011640114.1\|782700_782883_+\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|184862
NC_008346.1\|WP_011640100.1\|764327_765149_+\|polyamine-aminopropyltransferase	unknown	unknown	gnl\|CDD\|234843
NC_008346.1\|WP_011640108.1\|776565_777324_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|376322
NC_008346.1\|WP_011640107.1\|774917_776126_-\|thiolase-family-protein	unknown	unknown	gnl\|CDD\|180261
NC_008346.1\|WP_011640102.1\|766427_766967_-\|rubrerythrin-family-protein	unknown	unknown	gnl\|CDD\|153100
NC_008346.1\|WP_011640099.1\|763847_764306_+\|arginine-decarboxylase,-pyruvoyl-dependent	unknown	unknown	gnl\|CDD\|234933
NC_008346.1\|WP_011640115.1\|782948_783626_+\|bifunctional-precorrin-2-dehydrogenase/sirohydrochlorin-ferrochelatase	unknown	unknown	gnl\|CDD\|224562
NC_008346.1\|WP_011640098.1\|762801_763689_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176112
NC_008346.1\|WP_041427351.1\|783601_784918_+\|glutamyl-tRNA-reductase	unknown	unknown	gnl\|CDD\|234592
NC_008346.1\|WP_011640110.1\|778893_779742_+\|UbiA-family-prenyltransferase	unknown	unknown	gnl\|CDD\|183814
NC_008346.1\|WP_173309189.1\|765264_766161_+\|agmatinase	unknown	unknown	gnl\|CDD\|212539

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_041427349.1\|779961_780582_+\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|180312	PRK05920, PRK05920, aromatic acid decarboxylase; Validated.	3.95827e-94
NC_008346.1\|WP_011640109.1\|777452_778901_+\|menaquinone-biosynthesis-decarboxylase	gnl\|CDD\|163413	TIGR03701, mena_SCO4490, menaquinone biosynthesis decarboxylase, SCO4490 family. Members of this protein family are putative decarboxylases involved in a late stage of the alternative pathway for menaquinone, via futalosine, as in Streptomyces coelicolor and Helicobacter pylori. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NC_008346.1\|WP_011640106.1\|774143_774524_+\|S-adenosylmethionine-decarboxylase-proenzyme	gnl\|CDD\|235105	PRK03124, PRK03124, S-adenosylmethionine decarboxylase proenzyme; Provisional.	5.77928e-90
NC_008346.1\|WP_011640105.1\|769283_773750_-\|hypothetical-protein	gnl\|CDD\|372986	pfam14264, Glucos_trans_II, Glucosyl transferase GtrII. This family includes glucosyl transferase II from the Shigella phage SfII, which mediates seroconversion of S. flexneri when the phage is integrated into the host chromosome.	0.00022704
NC_008346.1\|WP_011640104.1\|768115_769111_-\|tryptophan--tRNA-ligase	gnl\|CDD\|183400	PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed.	0
NC_008346.1\|WP_011640113.1\|781676_782528_+\|twin-arginine-translocase-subunit-TatC	gnl\|CDD\|376413	pfam00902, TatC, Sec-independent protein translocase protein (TatC). The bacterial Tat system has a remarkable ability to transport folded proteins even enzyme complexes across the cytoplasmic membrane. It is structurally and mechanistically similar to the Delta pH-driven thylakoidal protein import pathway. A functional Tat system or Delta pH-dependent pathway requires three integral membrane proteins: TatA/Tha4, TatB/Hcf106 and TatC/cpTatC. The TatC protein is essential for the function of both pathways. It might be involved in twin-arginine signal peptide recognition, protein translocation and proton translocation. Sequence analysis predicts that TatC contains six transmembrane helices (TMHs), and experimental data confirmed that N- and C-termini of TatC or cpTatC are exposed to the cytoplasmic or stromal face of the membrane. The cytoplasmic N-terminus and the first cytoplasmic loop region of the Escherichia coli TatC protein are essential for protein export. At least two TatC molecules co-exist within each Tat translocon.	5.11285e-81
NC_008346.1\|WP_011640112.1\|780690_781659_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|131795	TIGR02748, Heptaprenyl_diphosphate_synthase_component_2, heptaprenyl diphosphate synthase component II. Members of this family are component II of the heterodimeric heptaprenyl diphosphate synthase. The trusted cutoff was set such that all members identified are encoded near to a recognizable gene for component I (in pfam07307). This enzyme acts in menaquinone-7 isoprenoid side chain biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	1.86236e-108
NC_008346.1\|WP_011640114.1\|782700_782883_+\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|184862	PRK14860, tatA, twin arginine translocase protein A; Provisional.	1.9569e-15
NC_008346.1\|WP_011640100.1\|764327_765149_+\|polyamine-aminopropyltransferase	gnl\|CDD\|234843	PRK00811, PRK00811, polyamine aminopropyltransferase.	9.05098e-150
NC_008346.1\|WP_011640108.1\|776565_777324_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|376322	pfam00348, polyprenyl_synt, Polyprenyl synthetase.	2.12571e-08
NC_008346.1\|WP_011640107.1\|774917_776126_-\|thiolase-family-protein	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	1.65156e-160
NC_008346.1\|WP_011640102.1\|766427_766967_-\|rubrerythrin-family-protein	gnl\|CDD\|153100	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain. Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.	3.57436e-56
NC_008346.1\|WP_011640099.1\|763847_764306_+\|arginine-decarboxylase,-pyruvoyl-dependent	gnl\|CDD\|234933	PRK01285, PRK01285, pyruvoyl-dependent arginine decarboxylase; Reviewed.	4.70756e-77
NC_008346.1\|WP_011640115.1\|782948_783626_+\|bifunctional-precorrin-2-dehydrogenase/sirohydrochlorin-ferrochelatase	gnl\|CDD\|224562	COG1648, CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism].	1.26542e-61
NC_008346.1\|WP_011640098.1\|762801_763689_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.06112e-85
NC_008346.1\|WP_041427351.1\|783601_784918_+\|glutamyl-tRNA-reductase	gnl\|CDD\|234592	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed.	0
NC_008346.1\|WP_011640110.1\|778893_779742_+\|UbiA-family-prenyltransferase	gnl\|CDD\|183814	PRK12888, ubiA, 4-hydroxybenzoate octaprenyltransferase.	2.94996e-97
NC_008346.1\|WP_173309189.1\|765264_766161_+\|agmatinase	gnl\|CDD\|212539	cd11593, Agmatinase-like_2, Agmatinase and related proteins. This family includes known and predicted bacterial and archaeal agmatinase (agmatine ureohydrolase; AUH; SpeB; EC=3.5.3.11), a binuclear manganese metalloenzyme that belongs to the ureohydrolase superfamily. It is a key enzyme in the synthesis of polyamine putrescine; it catalyzes hydrolysis of agmatine to yield urea and putrescine, the precursor for biosynthesis of higher polyamines, spermidine, and spermine. As compared to E. coli where two paths to putrescine exist, via decarboxylation of an amino acid, ornithine or arginine, a single path is found in Bacillus subtilis, where polyamine synthesis starts with agmatine; the speE and speB encode spermidine synthase and agmatinase, respectively. The level of agmatinase synthesis is very low, allowing strict control on the synthesis of putrescine and therefore, of all polyamines, consistent with polyamine levels in the cell. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	1.15017e-124

>NC_008346.1|WP_011640106.1|774143_774524_+|S-adenosylmethionine-decarboxylase-proenzyme
MQSLGRHVLAEIYGCRFEVLNDVKKVEDIMVNAALEAGAEIREFVFHKFSPQGVSGVVVISESHLAIHTWPELGYAALDVFTCGDRVNPWDACNYVAEMFSAGDMKASEVKRGLMEQPEERLVANM
>NC_008346.1|WP_011640105.1|769283_773750_-|hypothetical-protein
MRFRVVLLFIFLLVFFYPNANDLALAAEKQEKKAIILVMDYIDVADLCQADTPNLHRLVTKSGTALINIRTKSRLPSSSYLSLASGTRVGSIPNSEFSFNSSEEVGELPNIFIDRNSPPSAGKLYQLFTGLLAPPEGLVNLYIEPLKKYAGKHNPSFTPGQLAALAEDCGLKTAALGNADTINSKDRSIVLLAMNEAGQVYEGDVSANLLEKDKLSLAGVRSQQQILLDKIDDSLQKADIIFVDLGDSSRVEKSRLNCADEVLVQHRKHAIERNDELLGRLLPRLDLQKTMLVILVPNPHKDMVLAGNFGLTAFIMYQPGNEAGLLTSSTTRRSGLVNSSDFLPSILAFFNPESIYQNSSMKVVPATDNSLEKLEGDLGFFVRLRAARSPLHYSFVALAFLSIIGVACLACNIRTKWKSFWLFLFYTGLSMPLVFMFLSYSSYPSVSWNIIMALAASMLLALLLQLIFRSSANALLFLTATVALLTLVDGLRGSPLMLLSPLGSDAIAGGRFYGIGNDYMGILIASSVIALSLLLAKLRLSNKGRALIALPSLLLLSFTIGHPAYGANVGGLITALVTTGVLVIYLLEQRLHFKQLLIIGGMAVLGVLLTAFLDSWLNPNPSHAGKTIKLLISNDPGIFLSIIRTKLGILGSTIYHSAWSVVLLLGIIVLASIWHKKPIMALKEAKPEVLPVSNTLLIAAATVFLVNDTGVIAAALVFLYLLSYLGILLAGEGGDTGGQFSCAPRSTRELSPCVPASPSVPKKIIIGGLILACVFGCAKPVQAAETERKPEPGRVIIYMIDKLSINDLSPKTTPYLWKLQEQGGIGLLNTITGGERTSKNGCCTISAGKLAVGSSNAHLNYEAGEVLEEELAADIFARNTGFVPEKDDILISSINVIEKNNNQRNLGQAGRLGDSIHALGLKTAVIGNSDRPGYPNRPGCLLLMDSRGIVDNGAIGPQMCRPGGFNESLLPLQSDYDKMHEQFSILRDDNDVILMEFGDLSRLESMYSSFSPARYQEERKNILQRIDGSISQIQGELPPGDNCIYIISPSPSRNSYIPSALLTPIIIIKPGFEGTLTSYSTRRTGIVLTSSLQNSILNCLNPERKENIFATAANDSFQQLKRLNHREVFNYVYQPIILSLFIGLILLLLLLACWLSLRSPDNPLRLPILGFILCLPWSMLLIGLFTFTRPLYFFLLLLLLNLLLTIAGFLLARILRLNPLFLIISGTIITIAWDLISKGSLIANSVMSYRVISGARYYGLGNEYMGVLIGATIALATLIFSKSFTSKKRLVLAFIFAAIIFLIAYPLFGINVGGAITASIGLGYSYLAFNQGYIRISWKKIIVLLLLTALLLLLMALIDLKQPLEVQSHLGHSIALIMNGGWVEIINIISRKVQMQLRVISYGGWGWILLAGMLAVGFLLFRPRRRIKAYSERQPLILQGLRGILLSSMVAIIFNDSGITSAASMSLYFAVLFIYSLGLEPAQNEKQA
>NC_008346.1|WP_011640104.1|768115_769111_-|tryptophan--tRNA-ligase
MTKKKRILTGDRPTGSLHLGHYVGSLANRVKLQDEYDSYIIIADVQALTTHWEKDENLSRDVFQIATDYLAAGIKPEVSTIFIQSMIPEIHELTMYYSMFTTVNVLRHNPTIKTEAAQHGLSDMTYGFLGYPVSQAADITIFKADLVPVGEDQIPHIELSRKIVRRFNELYEPVLVEPQVLVGDVPRLVGLDGKDKMSKSLNNAIFLADSADEVKQKVWNAVTDPARIRKTDLGHPEVCTVYAYHQVFNKAEIEEVEADCRQGRIGCVQCKKNLTAKLNELLEPMRERRQSYLEQPDLVKDILQEGTKKAHAVAKETMLDVRSAMKINYFE
>NC_008346.1|WP_155814119.1|767709_767865_+|hypothetical-protein
MPENRDTKKKRVRIDDPEELKKIEQTRLKNNLIGIAILLFMLVVGLLYRGW
>NC_008346.1|WP_011640103.1|767116_767551_-|hypothetical-protein
MKETVKFGLDFIKLENHYLLPRVTSIVLTQSLYDILFQYVITPEKEERLKEFIALLEEHIKSKSQTPFSIPAAELGFIGEGLEELKLLNWMEFPVAEFSIRLEEGAEDSPEEMEQVLELLEEMLTFKRKGDSNSIYVYPGKIVT
>NC_008346.1|WP_011640102.1|766427_766967_-|rubrerythrin-family-protein
MDLKGSKTEQNLWAAFAGESQARNKYSFFASQADKEGFKQIAAIFLETADNEKEHAKRLFKFLMGGAVPATAENLLASAEGENEEHTSMYPEFEKIAREEGFNEIADVFKEIAEVEEEHEKRFRKLLENVKNNTVFKKDKSVKWRCRNCGYVHEGTEAPDECPACAHPQSYYEVMAENY
>NC_008346.1|WP_173309189.1|765264_766161_+|agmatinase
MLLYRNGGIALLSEIADLLEQKAFFMGSSRDLGACDRVLLGLPLDSTTSFRPGTRLAPYRIREVSEAVEEYSVYLNKSLEEIDFYDAGDVVIPFGNVPQSLKNIEATARYFLEHEKKLFSIGGEHLVSLPLIKVYHDFYPDMVVIQMDAHADLRADYLGEKLSHASVMRRVVEIIGTKKLFQLGIRSATREELDYARQHSQLYLDQFLTALKDVKEKIGQRSVYISLDIDVLDPAFAPGTGTPEAGGFSSRDLLQMLHELRELDVVGFDLVEISPPCEHGDNTSILGAKILREALLAY
>NC_008346.1|WP_011640100.1|764327_765149_+|polyamine-aminopropyltransferase
MDLWVTEYQTPSLGFSCKVKETLRYEKTEFQELSVVETEQFGKMLLLDGMVQTTEQDEFVYHEMITLVALNSHRNPEKVLIIGGGDGGTLREVVKHPAVSQATLVEIDERVVIASKDFFPDLACAFSEPKAEVLIADGIEYVKQQHQSFDLIIVDSTEPVGPAIQLFSREFYQSVYDALKDDGMLVVQSESPFYNQNVIKMAFGGINQVFPLTKLYLANIPTYPSGLWSFTVGSKLYDPQLPSCSYSQGCKYYTPEIHQAAFQLPAFVSRIIE
>NC_008346.1|WP_011640099.1|763847_764306_+|arginine-decarboxylase,-pyruvoyl-dependent
MLPLPKKYFLTAASCEGETELTAFDRALLEAGVGNTNLLRVSSILPPGCEYEPGLIIPPGSLLPIAYGTITSCEPGARIAAAVAVGIKKDSFGVIMEYEGYCSKAEAEEMVVKMCREAFRVRGLELDEIKIAATEHLVEKIGCAFAAVPLWY
>NC_008346.1|WP_011640098.1|762801_763689_+|LysR-family-transcriptional-regulator
MNLNLFKTYVRVVETKNLSKTAEEFGLSQPAVTKQIQSLEDYYGVLLLERAGRRLKPTEAGETLYQYAREIIKLLEKTDNIMETVVESKKGILYLGASTIPGQYILPDYIKKFSDSFPYINISLDIGDTEKIFKKVAERELDIGLVGGWLSNRKVEGFQWLQDELLLIVPENHHLMGRDEVRIEELLHEKWIFREKGSGTRKAAEELLNNHGIKKEDLHVGMEAGSTEAVLASVESGMGISIVSNWAIKKADPHRRIRSLKIDDPGATRFFYIIYPRQKSRRKAVESFLDFIKEE
>NC_008346.1|WP_011640107.1|774917_776126_-|thiolase-family-protein
MAEINEVVVVGMARTPIGRYLGGLASVRANDLAIIAANAAIERAGVDPGIIDEIVGATCLHAGNGSLPPRIIGMKVGLPVRSGSCMVSQNCASGMRATEIACQNIMLGKTDISLVTAVESMSNIPYLLQQARSGYRMGDGKVQDAMLSDGLVCQLAGGHMGMTAENIAEKYGITREECDALALTSHQNAVKAVDEGIFDREIVPVVIKSKKGDKVISKDEHPIRGASLETMAKLPPAFKKGGVVTAANASGINDCAAAAVFMSKKKCEELGLKPLMKLVGICSEGVDAKVMGLGPAVAMPKVLKQAGWKYEDVDYWEVNEAFAAQVLGVVRMLKEEAGIELDFSKTNHNGSGIGLGHPVGATGLRIIVSMYYELERLGLTKGGASLCVGGGSAMASLWTRDI
>NC_008346.1|WP_011640108.1|776565_777324_+|polyprenyl-synthetase-family-protein
MGIKYSFTRELRTELIDVDKVFKENLLPWWDDIYNYIKMLNEDFTWNQLPPLVYIVYRYLGLDRSISISMTNIFKTLYLANSIHGMVKDDKEGQKYDQDLQFAILIGDYMFGRMLKLLVEAGADKLVGLFAVMMAEINEGQVMERKLQAAHKDVLQKTRGSIYATAFETAGHLSGMKGILLENCRQLGLNLGMSIELMNCDISREEVLVYIHEAERNYKIINQYQRMVNSNLEAAINEVHSLLCNIENVAVV
>NC_008346.1|WP_011640109.1|777452_778901_+|menaquinone-biosynthesis-decarboxylase
MAYKDLQEFIQVLESEGELKRISVEVDPELEITEITDRVSKNYGPALLFEKVKGSDMPVLINAFGSEKRMALSLQVDKLDDLATEIMGLLEIADSVPQSLLDKVKVLPKLAQLSSFLPRMVKSGACQEVVDLNPSLDKIPVLKCWPEDAGRFITLPQVYTKDPESGKRNVGMYRLQVFDGQSTGMHWHTHHDGAENYRKNCQRGQATEVAVALGGDPAITYAGTAPLPKDIDELIFAGFIRKKPVELVKCKTVNLEVPADAEIVIEGYVDPYERRIEGPFGDHTGYYSLADEYPVFHVKCITHKKNAVYPTTIVGKPPQEDCYMALATERIFLPLLKLQLPEVVDMHLPMEGVFHNCVLVAIKKSFPGHARKIMSSLWGMGQMMFAKFIIVVDEDVNVQNVSEVMWKVFNNVDPRRDTMIVEGPLDVLDHSAPLPLIGSKMGIDATKKWMSEGHSREWPKDIVMSPEIKEMVSRRWSEYGFE
>NC_008346.1|WP_011640110.1|778893_779742_+|UbiA-family-prenyltransferase
MNKIREFLNMVDFGHSLFALPFAYLGAFLAAQGMPTWSQLLWITVAMVSARTAALCLNRLIDRHIDRANPRTSDWTLAAGRLPLSLVWLLVLFFTILLFYSASRLNPLCLKLSPLAVLALWLYSYTKRFTWCCHLLLGMAIGLGPVGAWFAITGTPDWQPVILGMAVACWIAGFDSMYACQDIEFDRANGLYSIPARFGIKGALLFSAIFHIFTIVLLLLNGLILNLGLLYYAGVAFVGIILIYEHGIVKPGDLSRVNFASFKINHYVGLIIFIMALLDIFL
>NC_008346.1|WP_041427349.1|779961_780582_+|UbiX-family-flavin-prenyltransferase
MTLGEDFVPRYIIALTGASGAVYALRLLEELLKQDNSEIHLITSDAARIVMEQELGWDCQDSLALSLQRYLPPGKIFFYDNSDIAAAPASGSFICDSMVVIPCTMASISAIAQGSSRTLLERAADVMLKERRPLFLVPRETPLNSIHLRNMLTLSEMGVSIIPAMPAFYHQPRTIEDMVSFVVGKVLDAMQIPHDLFQRYAGQIKK
>NC_008346.1|WP_011640112.1|780690_781659_+|polyprenyl-synthetase-family-protein
MANFNFFNPISTEMELLEQELSKKLDSRIELLNESAVHLIKAGGKRLRPAFALLSAHFYMDDLTEVIPLAVGLELIHMASLVHDDVIDNSQTRRGTETVKSAWGNRVSIYAGDFIFARALSLIATYERSNVVDVLAEASMKICEGEIIQMMSCYNVKLGLKNYLRRIERKTALLISVSCQLGAMIANAPEQEVRALRNYGYYLGMAFQVTDDILDIIADEQVLGKPTGSDIKQGVITLPTLYALRYSPRREELAQLLASPEACRNETGKIIDIIIDTDGIDYSYYITRHFARKAQKQLAFLPELPVKKNLYNIADFILAREF
>NC_008346.1|WP_011640113.1|781676_782528_+|twin-arginine-translocase-subunit-TatC
MALLKDLTPEEKQTIIEHLEELRKSLIISIIAIIAAAVFCFYYNEEILSVIISPLSGLGEGLVVIGVTEAFFIKLKLAFYAGFALAFPVVAWAIWRFFKPALYPEERKYVYVLLPVSVLLFSTGILFSYFGILPLVLKFFIYMQGPSLENMFTVERYVSFVTAFTIPFGLVFELPVVVFFLAKFGIIKAETLSKNRKYALLAIVVIAAALTPGPDPISQMLMAGPVYFLYEVSIIVAKMAKPRKKTEEEESEEPREPEPEREEQPRKPEEEKEGEEQATVDES
>NC_008346.1|WP_011640114.1|782700_782883_+|twin-arginine-translocase-TatA/TatE-family-subunit
MFGFIGNFGPWELLLILVIVLIVVGPGKLPQVGKSLGSALQNFRKAKEEDFEELEEKKDK
>NC_008346.1|WP_011640115.1|782948_783626_+|bifunctional-precorrin-2-dehydrogenase/sirohydrochlorin-ferrochelatase
MSLKFILTKQGLRAILFPIYLDLKAKTGLVVGGGQVAERKIENLLDYGMNIRVVSPQARARIQEWAEQSIIQWQARDFCESDLQGVFLAFVATDNNSVNQAVVEACRKTGVLINAVDDPPNCDFYVPSIVRRGSLVLAISTEGKSPFFARRLREELENTISPAYGEFVEIMGEIREEIKEKVPDITVRKKIFENLVYSEVLDLLKAGEKDKARERIEACMSSWRD
>NC_008346.1|WP_041427351.1|783601_784918_+|glutamyl-tRNA-reductase
MYVLLAGLNHRTAPVEVRERFSICGAELVQAYQELKSHADLEASVILSTCNRTEVYATAKDIQKGFEALETFLSKYAHMNEEDLIKYLYQPNCYDAILHLFRVASGLDSMIMGEPQILGQVKEAHLNAMEAGASDGVLNALFQRAIYVGKKVRTDTDIDRHPFSVSHAAVELARQILGDLDNKSVLVTGAGEMSETTIRYLMSNGLKSVIISNRSYDKAVKMAENFNGRAVYFNQLPTELSQADIVISCTAANHYVLREDNCRQVLESRQGRKIIMIDIAVPRDIDPALKDIPGVFLYDIDQLENVVDAGYEERQSVIQDAEKIILDELEKFNDWLGSLYVVPVIKALKQKGEIIKENEIRRACNRLGKLSEQEQNIIASMANSIVNQILHFPMVNLRELAATQQGHLYAEVAKKLFALQIDNEEYEKYEKFEIGNQG

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Crispr_ID: NC_008346_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_4

976000-976115

Orphan

Consensus_repeat	Method
GGGGGAACAGGGCCAGGAAACCAAAAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008346_4

>merge|NC_008346|4|976000-976115|CRISPRCasFinder
GGGGGAACAGGGCCAGGAAACCAAAAAACCGGGTTTTAAGGCGGAAATAGCTGAAGAGGAACTGCCTTTTAATGAACGACTGCAGCTGGGGGAACAGGGTCAGGAAACCAAAAAAC

>NC_008346|4|4|976000-976115|CRISPRCasFinder
GGGGGAACAGGGCCAGGAAACCAAAAAAC	CGGGTTTTAAGGCGGAAATAGCTGAAGAGGAACTGCCTTTTAATGAACGACTGCAGCT
GGGGGAACAGGGTCAGGAAACCAAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_011640272.1\|968278_968587_+\|flagellar-hook-basal-body-complex-protein-FliE	unknown	unknown	gnl\|CDD\|237183
NC_008346.1\|WP_011640275.1\|972080_973409_+\|flagellar-protein-export-ATPase-FliI	unknown	unknown	gnl\|CDD\|274608
NC_008346.1\|WP_011640284.1\|980554_981541_+\|flagellar-motor-switch-protein-FliM	unknown	unknown	gnl\|CDD\|235849
NC_008346.1\|WP_011640279.1\|977106_977649_+\|flagellar-hook-capping-protein-like-protein	unknown	unknown	gnl\|CDD\|236594
NC_008346.1\|WP_011640286.1\|982752_983115_+\|response-regulator	unknown	unknown	gnl\|CDD\|381097
NC_008346.1\|WP_011640268.1\|964994_966395_+\|ATP-dependent-protease-ATPase-subunit-HslU	unknown	unknown	gnl\|CDD\|235364
NC_008346.1\|WP_011640269.1\|966423_967212_+\|GTP-sensing-pleiotropic-transcriptional-regulator-CodY	unknown	unknown	gnl\|CDD\|235230
NC_008346.1\|WP_011640281.1\|978140_979568_+\|flagellar-hook-protein-FlgE	unknown	unknown	gnl\|CDD\|235557
NC_008346.1\|WP_041427384.1\|979684_979879_+\|flagellar-FlbD-family-protein	unknown	unknown	gnl\|CDD\|377645
NC_008346.1\|WP_011640277.1\|974081_974684_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225871
NC_008346.1\|WP_011640273.1\|968608_970231_+\|flagellar-M-ring-protein-FliF	unknown	unknown	gnl\|CDD\|235668
NC_008346.1\|WP_011640276.1\|973421_973871_+\|flagellar-FliJ-family-protein	unknown	unknown	gnl\|CDD\|225437
NC_008346.1\|WP_049750097.1\|977641_978028_+\|flagellar-protein	unknown	unknown	gnl\|CDD\|274181
NC_008346.1\|WP_011640270.1\|967376_967793_+\|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl\|CDD\|224728
NC_008346.1\|WP_049750158.1\|983755_984538_+\|flagellar-type-III-secretion-system-pore-protein-FliP	unknown	unknown	gnl\|CDD\|235566
NC_008346.1\|WP_011640274.1\|971245_972088_+\|flagellar-biosynthesis-protein	unknown	unknown	gnl\|CDD\|235850
NC_008346.1\|WP_155814129.1\|983130_983772_+\|flagellar-biosynthetic-protein-FliO	unknown	unknown	gnl\|CDD\|377320
NC_008346.1\|WP_011640271.1\|967799_968267_+\|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl\|CDD\|235556
NC_008346.1\|WP_011640285.1\|981537_982734_+\|flagellar-motor-switch-phosphatase-FliY	unknown	unknown	gnl\|CDD\|236154
NC_008346.1\|WP_155814272.1\|979953_980379_+\|flagellar-basal-body-associated-FliL-family-protein	unknown	unknown	gnl\|CDD\|224496

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_011640272.1\|968278_968587_+\|flagellar-hook-basal-body-complex-protein-FliE	gnl\|CDD\|237183	PRK12728, fliE, flagellar hook-basal body protein FliE; Provisional.	2.53687e-29
NC_008346.1\|WP_011640275.1\|972080_973409_+\|flagellar-protein-export-ATPase-FliI	gnl\|CDD\|274608	TIGR03497, FliI_clade2, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. [Cellular processes, Chemotaxis and motility].	0
NC_008346.1\|WP_011640284.1\|980554_981541_+\|flagellar-motor-switch-protein-FliM	gnl\|CDD\|235849	PRK06666, fliM, flagellar motor switch protein FliM; Validated.	4.70626e-127
NC_008346.1\|WP_011640279.1\|977106_977649_+\|flagellar-hook-capping-protein-like-protein	gnl\|CDD\|236594	PRK09618, flgD, flagellar hook assembly protein FlgD.	1.45769e-29
NC_008346.1\|WP_011640286.1\|982752_983115_+\|response-regulator	gnl\|CDD\|381097	cd17542, REC_CheY, phosphoacceptor receiver (REC) domain of chemotaxis protein CheY. The chemotaxis response regulator CheY contains a stand-alone REC domain. Chemotaxis is a behavior known for motile bacteria that directs their movement in response to chemical gradients. CheY is involved in transmitting sensory signals from chemoreceptors to the flagellar motors. Phosphorylated CheY interacts with the flagella switch components FliM and FliY, which causes counterclockwise rotation of the flagella, resulting in smooth swimming. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.00517e-63
NC_008346.1\|WP_011640268.1\|964994_966395_+\|ATP-dependent-protease-ATPase-subunit-HslU	gnl\|CDD\|235364	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU.	0
NC_008346.1\|WP_011640269.1\|966423_967212_+\|GTP-sensing-pleiotropic-transcriptional-regulator-CodY	gnl\|CDD\|235230	PRK04158, PRK04158, GTP-sensing pleiotropic transcriptional regulator CodY.	3.13859e-145
NC_008346.1\|WP_011640281.1\|978140_979568_+\|flagellar-hook-protein-FlgE	gnl\|CDD\|235557	PRK05682, flgE, flagellar hook protein FlgE; Validated.	9.44724e-119
NC_008346.1\|WP_041427384.1\|979684_979879_+\|flagellar-FlbD-family-protein	gnl\|CDD\|377645	pfam06289, FlbD, Flagellar protein (FlbD). This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown.	1.18663e-22
NC_008346.1\|WP_011640277.1\|974081_974684_+\|hypothetical-protein	gnl\|CDD\|225871	COG3334, COG3334, Uncharacterized conserved protein [Function unknown].	0.000166232
NC_008346.1\|WP_011640273.1\|968608_970231_+\|flagellar-M-ring-protein-FliF	gnl\|CDD\|235668	PRK06007, fliF, flagellar basal body M-ring protein FliF.	3.57596e-144
NC_008346.1\|WP_011640276.1\|973421_973871_+\|flagellar-FliJ-family-protein	gnl\|CDD\|225437	COG2882, FliJ, Flagellar biosynthesis chaperone [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones].	0.0010437
NC_008346.1\|WP_049750097.1\|977641_978028_+\|flagellar-protein	gnl\|CDD\|274181	TIGR02530, conserved_hypothetical_protein, flagellar operon protein. Members of this family are found in a subset of bacterial flagellar operons, generally between genes designated flgD and flgE, in species as diverse as Bacillus halodurans and various other Firmicutes, Geobacter sulfurreducens, and Bdellovibrio bacteriovorus. The specific molecular function is unknown. [Cellular processes, Chemotaxis and motility].	4.67862e-34
NC_008346.1\|WP_011640270.1\|967376_967793_+\|flagellar-basal-body-rod-protein-FlgB	gnl\|CDD\|224728	COG1815, FlgB, Flagellar basal body protein [Cell motility and secretion].	5.03583e-30
NC_008346.1\|WP_049750158.1\|983755_984538_+\|flagellar-type-III-secretion-system-pore-protein-FliP	gnl\|CDD\|235566	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed.	4.79428e-123
NC_008346.1\|WP_011640274.1\|971245_972088_+\|flagellar-biosynthesis-protein	gnl\|CDD\|235850	PRK06669, fliH, flagellar assembly protein H; Validated.	2.58122e-23
NC_008346.1\|WP_155814129.1\|983130_983772_+\|flagellar-biosynthetic-protein-FliO	gnl\|CDD\|377320	pfam04347, FliO, Flagellar biosynthesis protein, FliO. FliO is an essential component of the flagellum-specific protein export apparatus. It is an integral membrane protein. Its precise molecular function is unknown.	1.16491e-15
NC_008346.1\|WP_011640271.1\|967799_968267_+\|flagellar-basal-body-rod-protein-FlgC	gnl\|CDD\|235556	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed.	2.86778e-59
NC_008346.1\|WP_011640285.1\|981537_982734_+\|flagellar-motor-switch-phosphatase-FliY	gnl\|CDD\|236154	PRK08119, PRK08119, flagellar motor switch protein; Validated.	2.03219e-167
NC_008346.1\|WP_155814272.1\|979953_980379_+\|flagellar-basal-body-associated-FliL-family-protein	gnl\|CDD\|224496	COG1580, FliL, Flagellar basal body-associated protein [Cell motility and secretion].	2.92712e-24

>NC_008346.1|WP_011640277.1|974081_974684_+|hypothetical-protein
MILKKIKILLVFLSLLVLLGGGYYLLLYVNLLSAPAFLKNAPLLGNFVSRSSEQVSRLQYEEAFKQKEKAMTENQKLRQTLQNKAEEMENTRKSLADLKKKLKLSEQEDDNLKEEIAQLNSEILDLKSKQESKTAAYKDMAAYFSEMKAKTAADILSRLDDEDVIGIFSQMENDTVAELMQNMDAARAARISKKMLVAAP
>NC_008346.1|WP_011640276.1|973421_973871_+|flagellar-FliJ-family-protein
MKAFRFRLQTKLEICTRQEQIAWEEMQSRLKERELLLEELQYRERRLLAVEEEIRQDSCKAQGFQALLLKREFVPVLVMQIVQAEQNLSQAEARVEEARVLLLERKRETSTLEKLKERAWQEYLLELQQEEQKIIDEIAINNHFRRDLA
>NC_008346.1|WP_011640275.1|972080_973409_+|flagellar-protein-export-ATPase-FliI
MNKAPALPLEKYLDALDKTTTCQLKGRISQAIGLTIEATGPRVRMGELCFLQTNYSDRQLVPAEVVGFKDKKILLMPLGNLEGIGPGSELLASGTTLRVQVGMELVGRVLNGLGEPIDDRGRIKSETTYPVTNQPPSPLKRKRITEVLQVGVKAIDGLVSIGKGQRMGILAGSGVGKSTLIGMIARNTEADINVIALIGERGREVREFLERDLGEEGLGKSVVVVATSDQPALVRLKGAFVATSIAEYFRDQGKDVLFLMDSVTRFALAQREVGLAIGEPPATRGYTPSVFAMLPKLLERAGTSEKGTITGLYSVLVEGDDLNEPITDAVRGILDGHIALSRSLAAMNLYPAIDVGQSISRVMIDIASPKHIKNANRFRSILATYEEARDLIDIGAYKKGSNPRIDESIALIDKCQNFIRQDIYDEANITTTLENLEEAVRL
>NC_008346.1|WP_011640274.1|971245_972088_+|flagellar-biosynthesis-protein
MSKVIKGSDMLLFQPKVIDLTAIYELKKQAEAEKLEATEEITEEDLLSNDIALKQLELKELQLEAERIVDENEKIVRELLEKVREEARTIIAEAQEEAEVIRQQALEKAEELLVSKQKEGYENGLKKAQEEIEADRLSAMQESQRILEEARQSKIQIMNSSEADMVRLVMAVSRKVIGGELETNPRVIINIIREGLNYLDNPQNVTVYVNPLEVDKILEVMQSESFNDIGSNEIPLKITPDKRIQAGGCTLESDAGSVDARLETRIASVEKAIQEVAPDE
>NC_008346.1|WP_011640273.1|968608_970231_+|flagellar-M-ring-protein-FliF
MESFAEKLKETAGRVAGSWQNMNLNQKVLAGGGILLILAAAIILVISSSRDTAYEVLYTELDKKDASQITAKLDEGKVPYKLENGGTTILVPPDLKDKTRLTLASENLPRGETGFELFQESKFGETQVDKKVKYQVALQGELARSIQSLDKVKAAKVNLALPESTLFSDNEELPKASVVVNTREEEKLSPKEIQGIINLVANSVDKLTTENVVIVDQHGNLVSENLPMANGDISETVKWQMAMKRQYEKEKQDAIQSMLDKSLGQNNSVVRVNAELDFDNKEQKDELYSHDDAGPFVRSEEIKKESGTDTTQPVVGVPGTDTNIPQYQEVDAAGGVSTYDKSSKIRNYEINKTEKVTKVAQGDVKYDYLTVAVLVNSKATEPLKLGETEEEKIATIRNIVATACGLRENRKDESVRLEDNISVAFVDFYTEPQAEAPGGTMDQIMRSPLTPWLLAFLVVLIILLAWWLMQRRERRRAEEEAEEAGIDTLIQEEIRVEDLIETGLSPEEKERRKIREEIDRIINENPEIAAQVLKTWLAEE
>NC_008346.1|WP_011640272.1|968278_968587_+|flagellar-hook-basal-body-complex-protein-FliE
MKLGALDSIALAGINPGQPSVMKDSPANKEGGFFNYLKEALQEVDELQKEAASSAEKLALGDETYLHNTILAYEKANLALQLTVEVRNKLVEAYQELMRMQM
>NC_008346.1|WP_011640271.1|967799_968267_+|flagellar-basal-body-rod-protein-FlgC
MGFLNSIDTSASGLTAQRLRMDTIASNMANVETTRVDNRTGPYRRQVVVFEARNASAPKKRFQRFLEEQSQTFNAANSGVRVKQIREINENEAPYRRVYDPSHPEADNEGYVNYPNVNIVEEMINMISATRAYEANAQVIEATKSIAMRALDIGR
>NC_008346.1|WP_011640270.1|967376_967793_+|flagellar-basal-body-rod-protein-FlgB
MLERILETKTHILLNKAMDVGTLRNDVIADNIANADTPKFKRREVIFEEKMKKALEGTTDQLGLNLTNSRHIQMEGNNMDIEPEVRVLEDLTFRNDENNVDIDNEMAKMTKNKINYDAVSRSMSNEIRLLRMAITGRG
>NC_008346.1|WP_011640269.1|966423_967212_+|GTP-sensing-pleiotropic-transcriptional-regulator-CodY
MSKSLLEKSRAINRILQKIAGHPVNFFEIADVLCRNLECTVFIVGRRGQIGGYAFAEGAICQEIQQLIKHAERFPESFNQELLNILETQTNIILKDGRKCLFNPDNVNCSCSARIWSITPVFGGARRIGTLIFMRDKVKFTEEDIVLIEYGAMVMANEIMRIRTERIEEEARKKASVQIALATLSYSEKEAIDHIIAELKGKEGLLVASRIADKVGITRSVIVSALRKFESAGVIESRSLGMKGTYIKVLNDYLFEELRNQA
>NC_008346.1|WP_011640268.1|964994_966395_+|ATP-dependent-protease-ATPase-subunit-HslU
MFKLTPREIVEELDKYIIGQQEAKKAVAIALRNRYRRKLLPDELREEIYPKNIIMIGSTGVGKTEIARRLARLVKAPFIKVEASKFTEVGYVGRDVDSMVRDLVETSIRLVKQEKMAAVEQKGRQMAEERIVDILLPFDGRKSKSPKNPFEFLLGSIQERDDVDDESERRRREIGQRREILRQKINRLELEDETIEIEVEEKNPSFMEIFSGSGVEEMGINLQDMLGNLMPRNKKKRKVSIAEARRILTYEESQRLLDMDEIHREGIKRAEEDGIIFLDEIDKIASKESNYGPDVSRGGVQRDILPIVEGSTVITKYGPARTDHVLFIAAGAFHVSKPSDLIPELQGRFPIRVELESLKKEDLKRILTEPNNSLIKQYIALLSTEKLTMDFTPEAIDYIAERAYEVNSRTEDIGARRLHTVMEKLLEDLLFNSPDMAGEKLVIDIDYVAERLDRIVEDEDLSRYIL
>NC_008346.1|WP_011640279.1|977106_977649_+|flagellar-hook-capping-protein-like-protein
MDSSQVKWETVPWLSNEPQSSKSSKEINKGLDKEAFLKLLLTELKYQDPIEPVKDKEFISQMANFSSLEQMTNLNSSFNKLSATLNSGILPGLVMQQSSTMVGREVFYTDPDSGASSNGIISSVVFREGIPYYVIDDKEITMNNISRLGAINVGYSDALLEQILATLLNMQNSMSSGEDD
>NC_008346.1|WP_049750097.1|977641_978028_+|flagellar-protein
MIKLTGKIYFPPSTLIQPAPSKQDKAVKPPVGGSFNQVLTQKLAGDLKFSQHARERLKSRNIELSSTDMNNIQNAVNKAREKGARDSLILMPDLALVVSIKNNTVITAVDGQHLKENIFTNIDSAVIV
>NC_008346.1|WP_011640281.1|978140_979568_+|flagellar-hook-protein-FlgE
MMRSMYSGVSGLRNHQTRMDVIGNNIANINTAGYKKSRVVFQDTLYQTMRGATRPDSSGSRGGTNPMGIGLGMSVSSIDQIHTGAPTTATNKLLDMGIDGDGYFMIRHGQQKYFTRAGNFELDTKGNLVHTANGYYVQGWVTKIDPVTGQWNLDCSREVETVDISGLLACDPQATKEMSFSGNLDAEIPFKQVDPEDESIYPGTQESIITSMDVWDSLGKKETVYFRFFKYEVDAGPPRLSNWAVDISLNNPLFENAKDYDSTSDFATVDLSVDPPTEETLTTGETEIVRLFNLQFDDNGKVVLAGTPDDPEPKTVDLIIDRASEAAEDIEFKIDFSAMTQFAGNSVTEIAQNGYGMGSLSSYTVGIDGVIRGSYDNGETRDLARVALARFQNPAGLTQLGGTMFQKSVNSGEAVVSPPTESGMGKIVPSSLEMSNVDLSEEFTDMIVTQRGFQANSRIITTSDEMIQELVNLKR
>NC_008346.1|WP_041427384.1|979684_979879_+|flagellar-FlbD-family-protein
MIYLTRLNGEKIVVNIDMIELMEETPDTVVTLNTGKKFVVRERIWQIREEIIRFRKQSFTNLKK
>NC_008346.1|WP_155814272.1|979953_980379_+|flagellar-basal-body-associated-FliL-family-protein
MKLIIIGLLVFVVAVGGSYFLMKSLMAPLMPKQEGAGKLMTGNLVEVGEFTTNINDVNGQRFLKVKVTVEVSTDDKKAQEKITQYMPVIKDSILTIISSKTVADLDVRNRNNLKAEIKNDLNAKIGANTVLNVYFTDFIMQ
>NC_008346.1|WP_011640284.1|980554_981541_+|flagellar-motor-switch-protein-FliM
MSEVLSQSEIDALLSALSDGSVDADLLKEEELKSKVKVYDFRRPNKFSKDQIHTLQVIYENYARTLGTYLSGQLRVPLQVELLSVEQLTYEEFIRSIPNPTILNIFSLYPLHGSAIMEINPNLGFAFLDRLLGGPGYAPSKARALTEIEQTVIERLSQRMLDYLEEPWGSIIQIEPSLERVETNPQFTQLVQPTEIMIIVSLETRMGDVMGMINICIPFLVLEPILDKLNVHYYYSTAAQERSPANIAAIRTKLENTTIPIKVVMGKTVITVRDLLALSVGDVIPLNRNISQELDIVIGNRAKFLGKPGVFANRMAIQVTGIVEEESE
>NC_008346.1|WP_011640285.1|981537_982734_+|flagellar-motor-switch-phosphatase-FliY
MNDGILSQEEIDALLTGSSPVTDTIGSSSDPVSTSSINLSDFEKDTLGEVGNISMGTAATTLSTLLRKKVSITTPDVSVTNPEELQLLYPLPFLVVEVSYTQGVTGTNVLVIKEEDAAIIADLMMGGDGLSAEGKNLGDLELSAVGEAMNQMMGSATTSLSSMFNQRIDIAPPQLTVIDMGKEFLQLSTSFDDVVKIKFKMEIENLINSEIMQIIPMEAVENIMSILLGSTAEESSAEAVMEEPLVGMPLPETKAAAVAAPRQAETAISPPPQEPIYGQAFVQSPREMSNRPQFAVQPVQFAPLQESNMLHSPQNLDLIMDVPLDVSVELGKTKKTIGEILELNQGAIIQLDKLAGEPVDLLVNGKLIAKGEVVVIDENYGIRITTIISPIDRMNKLQ
>NC_008346.1|WP_011640286.1|982752_983115_+|response-regulator
MGKRVLIVDDAAFMRMMIKDILSKNGYTVVGEAENGNVAIEKYKELKPDLVTMDITMPEMDGIAAVKEIKAVDPAARIIMCSAMGQQAMVIDAIQAGAKDFIVKPFQPERVIEAVSKALV
>NC_008346.1|WP_155814129.1|983130_983772_+|flagellar-biosynthetic-protein-FliO
MKSMIAWRKRIFPLAILALLVMAMLAGNVGAIDNMSDLNQELDKEPPSNDRSSSLWLDFLKLIVVLGLIIAAAWSVIRIFGKQVNQKMQGSWLHVVDEVIMGQNRGIVLCEIGEKLYAIGVTDHSISFLFEVDNPKLREEISQIDISPGEKPTGAGLSELKKKLSAFGFKKSKPDRKDFSLLMGEQVRRLEQLSYKSMEEKRLGSKRSDENKD
>NC_008346.1|WP_049750158.1|983755_984538_+|flagellar-type-III-secretion-system-pore-protein-FliP
MKTKTNIWGLSYAKILFLLFLLLLVFPGTVAAEPLQLPNLNLQIGGGAGEPQDLSVALQLIILITVLTLAPAILIMLTSFTRIMVVLAFIRTSLATQQMPPNQLLIGMALFLTFFVMAPTFQEVNSQALQPYFKGKITQEQAFEKGMNPLRSFMFKQTREKDLALFVKMSKMERPHNFKDIPNYVLIPSFVISELKTAFQIGFIIFIPFLIIDMVVASALMSMGMMMLPPMMISLPFKILLFVLVDGWNLVIQSLILSFK

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Crispr_ID: NC_008346_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_5

1519323-1519441

Orphan

Consensus_repeat	Method
TATATTCATTACATACAAATACTTATTTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008346_5

>merge|NC_008346|5|1519323-1519441|CRISPRCasFinder
TATATTCATTACATACAAATACTTATTTTTTTAAAGAATGTTGATATATTGGGATTGTTAGGGATTTTCTAAAAGTGGACATCTTATCTATATCATTACATACAAATACTTATTTTTTT

>NC_008346|5|5|1519323-1519441|CRISPRCasFinder
TATATTCATTACATACAAATACTTATTTTTTT	AAAGAATGTTGATATATTGGGATTGTTAGGGATTTTCTAAAAGTGGACATCTTAT
CTATATCATTACATACAAATACTTATTTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_011640728.1\|1525037_1526453_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|225116
NC_008346.1\|WP_162010605.1\|1526670_1529166_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|225116
NC_008346.1\|WP_155814160.1\|1518235_1518409_-\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011640721.1\|1515084_1515897_-\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011640730.1\|1530135_1531614_-\|stage-IV-sporulation-protein-A	unknown	unknown	gnl\|CDD\|378203
NC_008346.1\|WP_041427449.1\|1513143_1513536_-\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011640720.1\|1513931_1515002_-\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_041427451.1\|1517996_1518206_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378518
NC_008346.1\|WP_011640723.1\|1517560_1517980_-\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011640722.1\|1516337_1517534_-\|DUF5309-family-protein	unknown	unknown	gnl\|CDD\|379950
NC_008346.1\|WP_041427453.1\|1529129_1529465_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214512
NC_008346.1\|WP_011640727.1\|1523564_1524863_-\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NC_008346.1\|WP_041427450.1\|1516046_1516235_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NC_008346.1\|WP_011640725.1\|1521388_1522609_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
NC_008346.1\|WP_011640732.1\|1533059_1533647_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl\|CDD\|234691
NC_008346.1\|WP_011640717.1\|1510237_1511563_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|377466
NC_008346.1\|WP_011640718.1\|1511578_1513147_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|222858
NC_008346.1\|WP_011640731.1\|1531772_1532804_-\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234629
NC_008346.1\|WP_011640724.1\|1520178_1521099_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|234698
NC_008346.1\|WP_011640726.1\|1522640_1523543_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_011640728.1\|1525037_1526453_-\|PAS-domain-S-box-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	4.51484e-58
NC_008346.1\|WP_162010605.1\|1526670_1529166_-\|PAS-domain-S-box-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	7.6187e-57
NC_008346.1\|WP_011640718.1\|1511578_1513147_-\|hypothetical-protein	gnl\|CDD\|222858	PHA02533, 17, large terminase protein; Provisional.	7.17342e-46
NC_008346.1\|WP_011640730.1\|1530135_1531614_-\|stage-IV-sporulation-protein-A	gnl\|CDD\|378203	pfam09547, Spore_IV_A, Stage IV sporulation protein A (spore_IV_A). SpoIVA is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.	0
NC_008346.1\|WP_041427451.1\|1517996_1518206_-\|hypothetical-protein	gnl\|CDD\|378518	pfam10960, Holin_BhlA, BhlA holin family. The Phage_holin_BhlA family is a family of holin-like proteins from both bacteriophages and bacterial chromosomes. In bacteriophage, holins are small membrane proteins that accumulate and oligomerize to form non-specific lesions in the cytoplasmic membrane allowing the release of the second protein, endolysins, to access the peptidoglycan. Most holins share common structural features: two or three transmembrane domains separated by a beta-turn, a short hydrophilic N-terminus, a highly charged C-terminus and a dual translational start motif. The BhlA holin of Bacillus is found to be toxic to the host cell where the site of action of is on the cell membrane and causes bacterial death by cell membrane disruption.	0.000235402
NC_008346.1\|WP_011640722.1\|1516337_1517534_-\|DUF5309-family-protein	gnl\|CDD\|379950	pfam17236, DUF5309, Family of unknown function (DUF5309). This is a family of uncharacterized proteins found in viruses and bacteria.	1.01168e-101
NC_008346.1\|WP_041427453.1\|1529129_1529465_-\|hypothetical-protein	gnl\|CDD\|214512	smart00091, PAS, PAS domain. PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels.	7.34302e-06
NC_008346.1\|WP_041427450.1\|1516046_1516235_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.66618e-05
NC_008346.1\|WP_011640725.1\|1521388_1522609_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
NC_008346.1\|WP_011640732.1\|1533059_1533647_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl\|CDD\|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	3.09499e-63
NC_008346.1\|WP_011640717.1\|1510237_1511563_-\|phage-portal-protein	gnl\|CDD\|377466	pfam05133, Phage_prot_Gp6, Phage portal protein, SPP1 Gp6-like. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. During SPP1 morphogenesis, Gp6 participates in the procapsid assembly reaction. This family also includes the old Pfam family Phage_min_cap (PF05126).	1.9006e-81
NC_008346.1\|WP_011640727.1\|1523564_1524863_-\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
NC_008346.1\|WP_011640731.1\|1531772_1532804_-\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	7.96808e-177
NC_008346.1\|WP_011640724.1\|1520178_1521099_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	1.95009e-35
NC_008346.1\|WP_011640726.1\|1522640_1523543_-\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	1.67993e-113

>NC_008346.1|WP_155814160.1|1518235_1518409_-|hypothetical-protein
MEKVEKLERRIEELENKLHSMKFDMMHLEARLTNYKLDNINMGLSLSNQITATKIKN
>NC_008346.1|WP_041427451.1|1517996_1518206_-|hypothetical-protein
MDLLKPEIMQMILSQGIFAVLFIWLLMSERKDSKEREEKLMVQLEKNSAVYENVIQAVNSLKDLIMKQK
>NC_008346.1|WP_011640723.1|1517560_1517980_-|hypothetical-protein
MEFTPEQQEYINNQIAEEKSKWETEILAPIQAELEGLKPVPKTDKEKEIETKEKELWAKEKSLHIKEKGLSDFADFINGESIEDLDKSIEKLNAILEAKKLNNSYIPEGHKTTDAYSVAEKNKNVEGMIGSKLSKLFSK
>NC_008346.1|WP_011640722.1|1516337_1517534_-|DUF5309-family-protein
MIKTTNFTDLENINLTKEISLVSPMDCPLTTIIMGKGYDTTGSKIVTWREKTLDNTEDISQVEGSTTNTFQSSARAEKSNVCEIFKKATSISGTADASSITGVSNLFAEEINDRLIEMKVNIEKKLINGTKDDGSTSPYVRKMDGLLAFALPENIVKSPTITEPKIKETVKKLWDAGMSSGTYIAMVNADLKEDIDALYANKYSYIAQESLFGLIVSSIQTNYGTIKLVLNRHMPTDKMVVFDPAFVKISYLRQPHFELLAKTGDSINGHVIAEMTLKMLNQKAIAVFEIDVVAPILSGATIDDTKKIVTITMSEKISNATASIAALKEKVTVATDGTTFAALGASDKVAITNGKLVVTFNSALSTATNKIKVGADALKDSAGNKNAEFTTDAIDATV
>NC_008346.1|WP_041427450.1|1516046_1516235_-|helix-turn-helix-transcriptional-regulator
MNIFYENERQYYSAIRRKKKIKLRQIAEELKVSVPLLSMWESNKTNMSLQNVTHYKQIIDNK
>NC_008346.1|WP_011640721.1|1515084_1515897_-|hypothetical-protein
MENKIKEMFPNWCNDDKKKYELILTDDIDSLVSCALLNKIKGYKINYFYDFETVYKIKDSDTPAIAIDCDLVNGRCWSNHVTMLSANDTVNSKSANLNNVLKISRENYYQKYCGSTAMQIWSFYDLPLPESEEGKMALLAIDGGYLGYYDKRFINIHSKYLNMLGFDELIEVLERHTKSEFYDFIQKHNLHKKIGVNRNGILTTQIDLATLQGLFNLDLSRPEKPFYISKELSRDWPTNLMSNKTYTKDDFPDMFSVALIYRNKVVFTKK
>NC_008346.1|WP_011640720.1|1513931_1515002_-|hypothetical-protein
MQNVLQKNIKDEFARIVERNLSIGMAVKNYKIMCDLLDEEVKDGNRNRKFQMEKWKRYFDFKKVGHKFIILEIYDQPLEKTDKRAKGNNKEYIQHIELLLLSYLSKQKGYRASFTVKKLFLMLSMINQNYIDKNYKEIKENSITDVTNYDINHFYQRSYQKLKEILFGSLRNLENRRLIDYTENTVINIREIVDGKLIQNNRRLATDDEKNYIRDTQRQVLKEMGLEIITQVYLKFKAKEYFDRVNELLWERYGIHYSYTEIDILFTHKYIVEALEEAEILAQEKKLNDKVINYMNKQAKNNYEKNQQEYKREYEKLIDSWIGEVSPIEVENLNLFQLQDTYLDAQMELAEILIRV
>NC_008346.1|WP_041427449.1|1513143_1513536_-|hypothetical-protein
MTLDKQLAKTPLKYRRYFRWKYKLPVRGRVYVDRPLEEIMRIDGVKNKETYYSWEKTEQYKHLIDLLIQSHAANDLIDMYNAMLDKAKKGDARAVNTVIKLQKSIAQNIKQNTNNNIIEDDEEEEDDLII
>NC_008346.1|WP_011640718.1|1511578_1513147_-|hypothetical-protein
MKKETKLEKINNDFFLWAKNFIKIIDNNGNLVKFVPNEQQVDFFNNMDKFNIIAKSRQLGFSSLAIIYSLWIACTKPNTNCLMVSYNVESTQALFEKMKQIYSDIPDKYKPAEKRNNRMELYLENGSRIMVKTAGVKSLGRGMNLQYIHLSEFAFYPDDQQKDALVSLEQALAKNMDSKIVIETTSNGYNYYQKLFTNAYKSKQSKYKAFFYPWTSSATANQFKHELNIAEDWFKVNNHNHRLTPEQLDIDELPLYNAKVSLKMIMWRRWKLQDMTLEDFQQEFPFTPEESFRATSRSIFNEQAINNRVTNLIPPLRKDELNITLPDTLARYYGKGFFMFKNIKPNQRYYAGIDTASGSGGDNSAISVFNSDGEQVAVFYDNKIPIYKFSDVVYDLGMMFNYAFLVVEKNSFGQSVIEKLRAERQYLNMYKMKTFDDRGKRKYTIGWITTSASKPRLVQDFKEQFEKNLILINDISTLDEMKIFIEADGKTSNKRGDGTNHDDLVIASALAIQGMKCGKWYL
>NC_008346.1|WP_011640717.1|1510237_1511563_-|phage-portal-protein
MNLQDYVNKYYDSDDKWFMQFTSEYGNWERIANIINIKEYLNGKHAILNRGVEMWNGKEFHPRTIVLNYAKTILNFSTSYLLKNPVTISGDEESVSIMKEIYKKGNYNKIDWDILDKVCKYGSIAEYVYIDKNGEIQSKLINPEDSFPVYNDENEYIGFVEHYTSINGISYWNVFDENTVKKYDDFGGEVTFRGEFHNPSGLPIIYKNKNEMDETAGRSDLEDYVNIIDNLEDLISKYTDSIYKFVNPIPVVVGQKLGIGKNGEGAIPANLVGSGINLDDGGSFGFANGQLDYKSFESVWKILYNSLLQISSVPAVSMGVQDVSNLSEVSIKLMFSLADLRAGMNEMYMREGMEFRFKAIESLLKAKGIVINSDALDVVFEYSRPMNRTDIINDLETLRGIGAISLQSTLEQCPMVYDVATELDRIKAEGSNVGSEDDNGE
>NC_008346.1|WP_011640724.1|1520178_1521099_-|tyrosine-type-recombinase/integrase
MLLKFAIKEFQEDREFRQISKATLTNYMGCLKEFHTYCLEKEIIEVTDITSNTIKSYLIYCQKERGNNPTTINSKLRSIKIFFNYLQEIEIFNEKNNPIHKVNYIKANVKIEVFSDKQINEMLSYYRRIKTRDKSLYAYRDSTIIITLLGTGMRLGELCNLKWSDVDFENQHIILFGKLQTQTSIPMADKLKSELQEYKLFCQKQFGKLPMFVFVDRTGKPLSPNAVKNMFKRLKQIMNFPNVRCCAYDFRHTFAHRFLMNGGDVFTLQKLLRHSSPAMTERYLAIWGTALQERANQFNPLNKFNL
>NC_008346.1|WP_011640725.1|1521388_1522609_-|aspartate-kinase
MSLIVAKFGGSSVASIDKIKHIAGRIKGMRDKGDDIVVVVSAMGDTTDELIELASLTGHDLCKREMDMLLATGEQQSAALLALTLNNFACSSISLTGWQAGIKSDDSHSKARITGIETGRIKNELKQGNVVIIAGFQGLSPQGDITTLGRGGSDTTAVALAACLDALRCMIFTDVEGVFTADPRIVKEAKKLPQISYEEMLEMASLGAGVLQPRAAEFAMLYNVDVEVLSSFSHNPGTIITEVANMENHRAVSGIAHDLNCARFALFDVPDQPGIAKTLFKTLAAENINVDIIIQSAMRDGRNDIAFTIEEKELSRAIPVVEGLVKKICASGMTYGNDVAKVSIVGAGMQSNIGVAAAMFEALADEGINIHMISTSEIRVSCVIDECHIKAAIKALHRKFELDKIE
>NC_008346.1|WP_011640726.1|1522640_1523543_-|homoserine-kinase
MFTVKVPATSANLGPGFDTLGLALQLYLELKVTIIPQSTRIRFFVDGEEYPEEIFGDNLVYQAMKKVFAEAAVVEAPGLELTINSSIPPGKGLGSSAAAIVAGLYAANEILEKRFTQEDLISWAVEMEGHADNVVPAVAGGLTTAMLYRGNVYYQQFTFPPELKLVVAVPDIQISTDESRQLLPKKIDFMDMVNNLQRASYLLASLIKHDFRYLPAAMDDVIFQPRRKQLIPGFDRVFSQALGNGAVGVALSGSGSSIIAFCQQEEKRVAEAMQDAFAASGIQSQLMILAADPDGVKVLR
>NC_008346.1|WP_011640727.1|1523564_1524863_-|homoserine-dehydrogenase
MIGVALLGCGTVGSGVIKLLQKNSEIIDKRIGESIVIKKVLERDTEKCQLLEIKDELITQDIQEILDDQDIAIVVELIGGIEPAFSYIMAALARGKHVVTANKDLIAIKGKDIFDRAKEKGVDFYFEASVAGGIPIVYPMKQSLAANQIQEVIGILNGTTNYILSKMSQEGRDFNEVLAEAQQLGYAESDPSADVDGLDAARKIAILSSIAFNSRVTLDDVYVEGIRSITAADIQYAKELGYVIKLLAIAKENSQQKIEVRVHPAFLPKTHPMAGVNDVFNAVFLHGDAVGEIMHYGRGAGQMPTASAVFGDIIEIARNILHHSNARIGCSCYENKAIMDIKELEGEYYIRMIVEDRPGVLAGIAAVFGNNNVSIATVLQKTSKQGWAELILITHRVREIHLRDSLTVLKGLSIVGEIKNVIRLEGTDREVD
>NC_008346.1|WP_011640728.1|1525037_1526453_-|PAS-domain-S-box-protein
MINRALINNAKKFLNILASIEDGYYEVDKAGNLVFFNQSLQEMLGYSKEELLGMNYKHYMTNEDAKKVFKTYNLVFRTGEAAKGFDWQLISKSGRKLYVETSVSPIFAADGEITGFLGIIRDISERKRTEQQIRESERRLADIINFLPDATFVVDIKGKVIIWNQAAEEMTGVKAEDIIGKDDYEYAIPFFGYKKPMLVDIVIEESTYAHNLIPGIERKGHTLIQEIFFPSVGDSGLYCWATTAPLFDGEGNQTGAIISLRDISRRKQTENALQESLEKAQTILRSTVNALAITTEKRDLYTAGHQRRVAQLATAIAREMQFPEDITRGIYMAATLHDIGKMQISSDILSKPGELNDIETLLVRTHTQVGYEIVKTIPFELPVADMVIQHHERMDGSGYPQGLAGSQIMLEARILAVADVVEAMSSHRPYRPALGISLALEEIRSHRGTLYDPDVVDACLRLFDRGKIDFL
>NC_008346.1|WP_162010605.1|1526670_1529166_-|PAS-domain-S-box-protein
MDAKKIPRLHRLNISVPVDGKKDEDEVLILLEDLSERRQMEEAFVDSEHRLALIIDFLPDATLAIDCNGRVITWNRAAEEMTGVRAREIIGKGNYEYALPFYGYRRPLLLDQVLSASAEWQQSYTVLEKKDRILSVENFYPAVGESGAYLRSTAAPLLDADGKLIGAIESIQNVTQKKRAEEITAIQRDLGISMIAVNGMEEALSICLNSALKISGMHAGAIFLVDKGGDKLTLSVHRGLSPGFVEQVKTCAFNTESSLYTQALYSSADELTAYFGDIILQEGLKSMAIIPIYHKDKMLASLKLSSRIISMVPEHSRQAIENVANYIGTIIARLQVEEELRESEERYRQLVEVSPDAIAVHINGRIVFINHAGARLLGAEKVEGILGRRIIEFIHPESRQVYIDLMEPLAANGVFPLTEMKIILINGRIIYAEVTGAALVFEGTPAVQVIVRDITVRKKAQYDLSREVYKLRVLYDLAVAMSSSQSMDETLKLTADKSRELFAADCIFIFLMDENKSEAFPHTLSGNKLTEWLEVRIPYGKGLIGMVAASESGYIIEDYITSPLFTHIFDDLVLEEGLICGLAAPIIIGNDCLGVLVVGHRKRTVLTEANLDTLTLIANLLAVEITRDRAEESLQKSLEHLRTVFECTVNALSITAEKKDPYTAGHQRRVASLACAIAQEMKLPQYYIDNVRTASILHDIGKLQIPTDILTKPGGLTEIERLLVKTHPQAGYEIVKTIPFAQAISTALLQHHERMDGSGYPRGLSGEEILLEARILAVADVVEAMASHRPYRPALGIESALEEIRCGAGTIYDAEVVEACLKVFSSNNFTF
>NC_008346.1|WP_041427453.1|1529129_1529465_-|hypothetical-protein
MSKDRPAMEFTNSSQEIKLEPNNSGLYILESINGLILCCNSSGSLTFANKKVREMLGIKVEEVPELKIYDFVNPQEYNLLEKKCLLPYKDIFHYLLNPVFWMPRKSLDFID
>NC_008346.1|WP_011640730.1|1530135_1531614_-|stage-IV-sporulation-protein-A
MEGNNILKDIAERTGGDIYLGVVGPVRTGKSTFVKRFMELMILPNIKDIFERDRANDELPQSGSGKTITTTEPKFVPNEAVEITTQNGISLKVRLIDCVGYSVDGALGYEEDEEPRMVRTPWFDYEVPFEEAAEIGTRKVITDHSTIGIVITTDGSISDIPRENYVSAEERVINELKELNKPFIVLLNSTRPYEKETLNLAEELSEKYEVSIIPVDAARMSTEQVYGILEEALYEFPVHEVNIKLPQWVDELEEDFWLRQNMETSIREILNAIRKVRDIDRAVEQLSDMENVSYVSLEEMNLGTGTARIEVSVPEELFYQALSEVSGFGVEGTHDIMRIMKDLSVAKREFDKISSALDEVKESGYGVVTPRLEEMFLEEPELIRQGSRFGVKLKAKAPSLHIIRADITTEITPIIGTEKQCEELVRYMLDEFEEDPGKIWESNIFGKSLHDLVREGIQNKLHRMPENAQHKLQDTLQRIVNEGSGGLICIII
>NC_008346.1|WP_011640731.1|1531772_1532804_-|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MPKICILGSGSWGTAQALLLSSKEFQVILWGRIEDGVDSLQQDRENRRFLPGIRLSDTIVATSDLARALKGADIVVMAVPSQSLREVLEKARPYLGKDSCLVNTAKGLEISSGMRMSQVVEDVLGKQSRERYAVLSGPSHAEEVARNIPTAITVASYHKENAFLVQDLYMTPFFRVYTNPDVAGVELGGALKNIIALGTGIASGLGYGDNTQAALLTRGLHEIIRMGEAMGGEARTFSGLSGIGDLVVTCSSRHSRNRQAGILIGQGYSLEETLKQIAMVVEGAHTIRVVHRLACQLRIDMPICTACYNVLYANRKARDEVDDLMRRQKKHEIEEIVKRKKGW
>NC_008346.1|WP_011640732.1|1533059_1533647_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MQEAALLVLCYLLGSIPFSYFFTRMLTRQDIRKRGSGNVGATNVFRTSGPGVALLAFLGDLLKGLLAAWIGQSTGSQLLLVICVILAVIGHIYPVFLGFKGGKGVTTSAGIILFLMPDVTGILLLIFLAIVYFTRYVSLGSITVACLLPLVSLAMGKPWSYVVIGILMAALVVYHHRENIDRLRNGSEAKITDKA

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Crispr_ID: NC_008346_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_6

1999255-2000383

TypeIII

Consensus_repeat	Method
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	PILER-CR
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CRISPRCasFinder
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CRT

15 spacers

cas1,cas2,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10

The CRISPR arrays of NC_008346_6

>merge|NC_008346|6|1999255-2000383|PILER-CR,CRISPRCasFinder,CRT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATCCGCTAATGAAACAATTCAATAGCCCAGCAATCGTTGGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATCAATGCCTTGAAAGAAGCATATGCCGTATGCAACATAGTGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATGTTGAAAGGTTTAAAGCTCTGAAGGCAGAATCCAGAGGGTTTCCGCCCCCTTAAAGGGGTCCTTCGTTTTTAATACCAGATAGTACAGCAGATAGTCAATCACTGCCGCTGGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATGTATTACAAGGAATTCGAATGTACTACAAAGAATTGCGCGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATGTAGTTTGTCTTTGGATCATCCACTCCAGCGGAATGCAGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATTCCATGTACCTGATAACATATTTGACCTTCATATCTTGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATGGAACTTTGTCCTTGAATCATCCCCTCCAGCGGAGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATCCAGAAGGGCGAGAGGGAAACGAAGGAGAAAGGGAGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATGTAGAATAACCAGTTTCGAAAAAACCCAAGAGGCGTTAGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATCCTACTCATTGTCCTGATTGTGGAAGTAAATTAAGGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATTTAATAACTTGTATAGCAGATGACCTCCTGTTATAAATGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATGTTTTTGTAAAAATAGTCATAGATAAAGCTAATAAAGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATGATTACCATGTCGACGATAGCTATAAAAAACTATATGGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATTTCATCAAATATTATCTAATAAAGAATTAATAAAGGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT

>NC_008346|6|3|1999255-2000383|PILER-CR
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCGCTAATGAAACAATTCAATAGCCCAGCAATCGTTG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CAATGCCTTGAAAGAAGCATATGCCGTATGCAACATAGT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTTGAAAGGTTTAAAGCTCTGAAGGCAGAATCCAGAGG
GTTTCCGCCCCCTTAAAGGGGTCCTTCGTTTTTAAT	ACCAGATAGTACAGCAGATAGTCAATCACTGCCGCTG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTATTACAAGGAATTCGAATGTACTACAAAGAATTGCGC
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTAGTTTGTCTTTGGATCATCCACTCCAGCGGAATGCA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TCCATGTACCTGATAACATATTTGACCTTCATATCTT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GGAACTTTGTCCTTGAATCATCCCCTCCAGCGGA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCAGAAGGGCGAGAGGGAAACGAAGGAGAAAGGGA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTAGAATAACCAGTTTCGAAAAAACCCAAGAGGCGTTA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCTACTCATTGTCCTGATTGTGGAAGTAAATTAAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TTAATAACTTGTATAGCAGATGACCTCCTGTTATAAAT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTTTTTGTAAAAATAGTCATAGATAAAGCTAATAAA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GATTACCATGTCGACGATAGCTATAAAAAACTATATG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TTCATCAAATATTATCTAATAAAGAATTAATAAAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT

>NC_008346|6|6|1999255-2000383|CRISPRCasFinder
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCGCTAATGAAACAATTCAATAGCCCAGCAATCGTTG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CAATGCCTTGAAAGAAGCATATGCCGTATGCAACATAGT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTTGAAAGGTTTAAAGCTCTGAAGGCAGAATCCAGAGG
GTTTCCGCCCCCTTAAAGGGGTCCTTCGTTTTTAAT	ACCAGATAGTACAGCAGATAGTCAATCACTGCCGCTG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTATTACAAGGAATTCGAATGTACTACAAAGAATTGCGC
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTAGTTTGTCTTTGGATCATCCACTCCAGCGGAATGCA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TCCATGTACCTGATAACATATTTGACCTTCATATCTT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GGAACTTTGTCCTTGAATCATCCCCTCCAGCGGA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCAGAAGGGCGAGAGGGAAACGAAGGAGAAAGGGA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTAGAATAACCAGTTTCGAAAAAACCCAAGAGGCGTTA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCTACTCATTGTCCTGATTGTGGAAGTAAATTAAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TTAATAACTTGTATAGCAGATGACCTCCTGTTATAAAT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTTTTTGTAAAAATAGTCATAGATAAAGCTAATAAA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GATTACCATGTCGACGATAGCTATAAAAAACTATATG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TTCATCAAATATTATCTAATAAAGAATTAATAAAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT

>NC_008346|6|2|1999255-2000383|CRT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCGCTAATGAAACAATTCAATAGCCCAGCAATCGTTG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CAATGCCTTGAAAGAAGCATATGCCGTATGCAACATAGT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTTGAAAGGTTTAAAGCTCTGAAGGCAGAATCCAGAGG
GTTTCCGCCCCCTTAAAGGGGTCCTTCGTTTTTAAT	ACCAGATAGTACAGCAGATAGTCAATCACTGCCGCTG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTATTACAAGGAATTCGAATGTACTACAAAGAATTGCGC
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTAGTTTGTCTTTGGATCATCCACTCCAGCGGAATGCA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TCCATGTACCTGATAACATATTTGACCTTCATATCTT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GGAACTTTGTCCTTGAATCATCCCCTCCAGCGGA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCAGAAGGGCGAGAGGGAAACGAAGGAGAAAGGGA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTAGAATAACCAGTTTCGAAAAAACCCAAGAGGCGTTA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCTACTCATTGTCCTGATTGTGGAAGTAAATTAAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TTAATAACTTGTATAGCAGATGACCTCCTGTTATAAAT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GTTTTTGTAAAAATAGTCATAGATAAAGCTAATAAA
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GATTACCATGTCGACGATAGCTATAAAAAACTATATG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TTCATCAAATATTATCTAATAAAGAATTAATAAAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_011641144.1\|2000509_2001787_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_008346.1\|WP_011639960.1\|1996473_1997694_-\|transposase	unknown	unknown	gnl\|CDD\|377531
NC_008346.1\|WP_011641138.1\|1990103_1991327_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|224437
NC_008346.1\|WP_011641141.1\|1994951_1996193_-\|hypothetical-protein	csm6	pfam09659_csm6_CAS-III-A	gnl\|CDD\|187877
NC_008346.1\|WP_011641147.1\|2004750_2005698_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	COG1567_csm4gr5_CAS-III-A	gnl\|CDD\|380071
NC_008346.1\|WP_011641140.1\|1993023_1994736_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
NC_008346.1\|WP_011639746.1\|2009535_2011182_+\|transposase	unknown	unknown	gnl\|CDD\|372705
NC_008346.1\|WP_011641143.1\|1998216_1999227_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_008346.1\|WP_011641139.1\|1991347_1992682_-\|acetyl-CoA-hydrolase/transferase	unknown	unknown	gnl\|CDD\|188463
NC_008346.1\|WP_011641154.1\|2013511_2015554_+\|beta-propeller-domain-containing-protein	unknown	unknown	gnl\|CDD\|378255
NC_008346.1\|WP_155814189.1\|1984925_1985126_+\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011641145.1\|2002711_2003461_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NC_008346.1\|WP_011641149.1\|2006387_2006864_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NC_008346.1\|WP_011641150.1\|2006856_2009283_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NC_008346.1\|WP_011641142.1\|1997890_1998220_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_008346.1\|WP_041427503.1\|2005672_2006368_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NC_008346.1\|WP_011641134.1\|1985107_1985695_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NC_008346.1\|WP_011641153.1\|2012640_2013330_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NC_008346.1\|WP_011641146.1\|2003611_2004754_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NC_008346.1\|WP_041427501.1\|1988360_1989926_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_011641144.1\|2000509_2001787_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	8.96106e-28
NC_008346.1\|WP_011639960.1\|1996473_1997694_-\|transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	9.07781e-18
NC_008346.1\|WP_011641138.1\|1990103_1991327_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|224437	COG1520, COG1520, FOG: WD40-like repeat [Function unknown].	3.83166e-12
NC_008346.1\|WP_011641141.1\|1994951_1996193_-\|hypothetical-protein	gnl\|CDD\|187877	cd09746, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems.	0
NC_008346.1\|WP_011641147.1\|2004750_2005698_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|380071	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain. Clustered, regularly interspaced, short palindromic repeat (CRISPR) loci play a pivotal role in the prokaryotic host defense system against invading genetic materials. The CRISPR loci are transcribed to produce CRISPR RNAs (crRNAs), which form interference complexes with CRISPR-associated (Cas) proteins to target the invading nucleic acid for degradation. The interference complex of the type III-A CRISPR-Cas system is composed of five Cas proteins (Csm1-Csm5) and a crRNA, and targets invading DNA. This entry represents the C-terminal domain found in Csm4. Csm4 structurally resembles Cmr3, a component of the type III-B CRISPR-Cas interference complex. Studies indicate that Csm3-Csm4 complex binds single-stranded RNA in a non-sequence-specific manner. Structural analysis show, Csm3 and Csm4 have one and two ferredoxin-like folds (also known as an RRM-like fold), respectively. The long beta-hairpin inserted into the C-terminal ferredoxin-like fold of Csm4, is well-conserved in the Cmr3 structure. The corresponding beta-hairpin of Cmr3 binds the D1 domain of Cmr2, as observed in the Cmr2-Cmr3 complex structure. Furthermore, it is suggested that the hairpin of Csm4 is responsible for the interaction with Csm1 (ortholog of Cmr2).	2.33133e-36
NC_008346.1\|WP_011641140.1\|1993023_1994736_+\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	1.18012e-18
NC_008346.1\|WP_011639746.1\|2009535_2011182_+\|transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.21254e-14
NC_008346.1\|WP_011641143.1\|1998216_1999227_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.35227e-111
NC_008346.1\|WP_011641139.1\|1991347_1992682_-\|acetyl-CoA-hydrolase/transferase	gnl\|CDD\|188463	TIGR03948, hypothetical_protein_FAEPRAM212_02812, butyryl-CoA:acetate CoA-transferase. This enzyme represents one of at least two mechanisms for reclaiming CoA from butyryl-CoA at the end of butyrate biosynthesis (an important process performed by some colonic bacteria), namely transfer of CoA to acetate. An alternate mechanism transfers the butyrate onto inorganic phosphate, after which butyrate kinase transfers the phosphate onto ADP, creating ATP. [Energy metabolism, Fermentation].	1.74914e-105
NC_008346.1\|WP_011641154.1\|2013511_2015554_+\|beta-propeller-domain-containing-protein	gnl\|CDD\|378255	pfam09826, Beta_propel, Beta propeller domain. Members of this family comprise secreted bacterial proteins containing C-terminal beta-propeller domain distantly related to WD-40 repeats. Jpred secondary-structure prediction shows family to be a series of 4 short beta-strands, characteristic of beta-propeller families.	0
NC_008346.1\|WP_041427503.1\|2005672_2006368_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.21843e-79
NC_008346.1\|WP_011641145.1\|2002711_2003461_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	4.44208e-22
NC_008346.1\|WP_011641149.1\|2006387_2006864_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	2.19491e-25
NC_008346.1\|WP_011641142.1\|1997890_1998220_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.1087e-22
NC_008346.1\|WP_011641150.1\|2006856_2009283_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NC_008346.1\|WP_011641134.1\|1985107_1985695_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.92843e-48
NC_008346.1\|WP_011641153.1\|2012640_2013330_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	4.03427e-33
NC_008346.1\|WP_011641146.1\|2003611_2004754_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.616e-27
NC_008346.1\|WP_041427501.1\|1988360_1989926_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	1.53565e-09

>NC_008346.1|WP_011641143.1|1998216_1999227_-|CRISPR-associated-endonuclease-Cas1
MSFLYVYERSAKIGVQENCVVVESKKENLKRILPIEGVENVIIFGDASLSSNCVKQFMERDINLTWLSSRGKFYGRLESTRNVNIYRQRKQFACGEDDEFCLALAKRIILAKVKNQITILRRYRRNRPEKSVQKIIDAMAKLLPIMERVHNKDELMGHEGMAARYYYQGLAELVEPDFAFSGRNRQPPRDPFNSLLSFAYTLLMYDLYTAAVNRGLNPYASFLHSIRRGHPALCSDLMEEWRAILADSLALYVTSKGIIKRENFEKPNEEGGVYLDGIGSKAFIAEYEKKVRGRSNYLAYVDYSVSFRRAMEMQCQRLAKAIEEGDPSIYQPVVIR
>NC_008346.1|WP_011641142.1|1997890_1998220_-|CRISPR-associated-endonuclease-Cas2
MIHSTNRIFLFDEFIAEERRKYLVVVIYDIVDNRRRAAFAKYLKGFGVRVQKSAFECILPDAKYQKLLKGIPKLIDKEDQVRVYKLTSNADIRAWGTVELLEEEEVVIL
>NC_008346.1|WP_011639960.1|1996473_1997694_-|transposase
MNIRQNCIFSFEDALKIQPKSRLEKIINTLDLKPVLCKLDKPGEIRVGPKPYPAYAMLNALIAMRLENMGTFTQLVERLTYDPHLRYVCGFEPFGTAPSKSCFSRFYSKLAQSGCLETLFTSLVKQAEEMGLLDLSSVAIDATKVEAYEKSVPRKNIIQDGNAADWGIKSDTNGNPIKWFGYKLHIGTDVRSGLPIAMKVTPANCSDSSVALELVEKCCANTQSKIVYFLMDAGYDHREIYSVIRDKYHAQAIIALNKRGAKQPPEGFDWDGTPICSARYRMVYWGSYQGVNKFRCPHIMGKCDCPFGSAWCSDSNYGMVVKTKVKDDPRLFSSPHRGSANWQKQYNLRTYSERCFSRFKENLGLEDGLNVRKITKVETHAYLCAITMIAAVIAINQDSSTRSSAA
>NC_008346.1|WP_011641141.1|1994951_1996193_-|hypothetical-protein
MTKRVCELADQNDRYRVHAMELCKKESYDCEIIELRYEEIDNPQQFDIFYPVFEKELIDIHNANPGCEILINLSSGTPQMKSACHLLALTTPFPVIPIQVTTPNESENYGSANYDLETSWKNNLDNDPELGTNNRTQLVESDNLRYLFLREAAISNINAFNYSSALAILASVAEFVPEDVIHLLMAAQHRKNMDLREAKKRSRLANYDLFPVKSGDAQELFEYLLLLDLQQNSGQLMDFVRGISPALSRLFECFLREKCQRQVKLDYCVNKRHEPDHYWLKRDKLAEKDPSLLCYYDLRFPNGFRDSDLSCSTLLPMIEFDCRPGGRFPNEKVLLKAQYMRSVEEKIRNPAAHNIVAVKEKQFMQLVGISSASLVKDMQWMFKITYPQYFNTLENVWNSYNRMNEYIISRLKA
>NC_008346.1|WP_011641140.1|1993023_1994736_+|IS1634-family-transposase
MRLSISKSKNSTSLYVIKSTYENGIHSSKVVESLGTVEELNKKLDGRDPIEWAKEYIAKLNEKEKLNKREVLVKYSPVKIIDKGQQRLFNGGYLFLQKIYHELKLDKMCWAIAKKYNFSYDLNSILSRLVYARVIYPSSKLSTYQLSSRFMEQPSFDLHQIYRALEIIAKEADSIQASLYSNSLAVSKRNTRVLYYDCTNYFFEIEQESGIKQYGYSKEHRPNPIVQMGLFMDGDGVPLAVYIGKGNTNEQLTLKPLEKKILSDFNCSKFIVCTDAGLASNSNRQFNNQGERAFITTQSIKKLKKHLKEWALSPEGWHLPDDSSIYSLDKIDEKKDLEKIFYKERWIVEDGLEQKLIVSFSLKYQNYQRKVRNAQIERARKVLDTNLGKLKKVNQNDYKRFIKKTSITPEGEVASKAVYEIDNSVIQKEEAFDGFYAVCTNLDGDTAALLTVNRRRWRIEECFRIMKSEFRARPVYLSRDDRITAHFITCFIALVVYRLLEKKLGEQYTCSEIVQGLRDMNFYEVKGEGFVPTYMRTDFTDSLHDAFGFRTDYQILTMRQMKNIFKATKS
>NC_008346.1|WP_011641139.1|1991347_1992682_-|acetyl-CoA-hydrolase/transferase
MTVVKKLSHAGSWREDYRQKLCSAEDAAALIKNNDIIAMAGGTSIPKGFATALSKRARELFNITLLQGFSLCNYEFMQPQFKEHIHIETSFVGLTERKCIQMGLATYVPIHLHKLPAWLDNRGPNVAAHAVTPPDENGYMNRSCYAGLCHRRSLENAKTVIVEVNPNTPWLCGDDFKLHVSEVDYIIENPFEMEEINDIPISENESQIAAFVADMIPDGSTIQLGLGGLANAVGHLLKEKKDLGLHAEVISNSMMQLMKLGVINNSRKNFYPGKALGCFAVGNRELWKYIDHNENFCFREVDYINDPQVIARNHGLISVNNSLMMDLTGQAASESIGSFQYSGTGGQVDFVRGAGLSPGGKSILSLNSTYKGKDGRIGSRIVPVLPEGTVVSTSRNEVQYVVTEYGVANLRWQSISERAKRLIAIAHPDFRDSLRFAARKHGWI
>NC_008346.1|WP_011641138.1|1990103_1991327_-|PQQ-binding-like-beta-propeller-repeat-protein
MENKELIRGFYNRIGIALFVVFFLLLAFPASGEAASKLEQFPAAKEAGQPGQLLWKLSGLGKLSSDIIFAPNGNLLFPSNNKLNCVNPEGKLIWEMQGKGKGMLGKPILTEAGGVYFANGSVIQEGKLNGALGWDFSVYADGKAQKTPLLARGPGNILYLPLPDALYGVDTVGHYVWMLSPWESSDGKTSKLINPRTFLACTADEQAFYLVFGDKAGNYKLAAINAQGEYLWKYWLGDISSAFLLADNEGKLYASVNFKKAAQGSKGGKLNQAKVYCFKNSSGNSPIWSNSFSVANQVTAPVLGNSKTLYFTGGNKLYALDTEKGKVLWDTPLLKLVSTPAVSQNGYIYGGSSDGDLFAVKPSGRLAWFRQLDGAVERAPLIGPDNFIYVHTAKGSLYKIKDNFKES
>NC_008346.1|WP_041427501.1|1988360_1989926_-|S-layer-homology-domain-containing-protein
MANLLVLFLMIQPVSSVMAFSDMEGHWSKPVVTRAATLDFIKGYPDNSFQPEKEISQMEALVLFMRAVGLGNEKTTAKTSKKEAPRPLKAPEVPWGQNYMDTAVKNELLDDKWISSFQADRPATRLQVVSLLCRLLQLPLPDSVSSGQNAFSDLDNTSSEYIPYIIALSQAGIMKGYEDGTFKPERSLKRSEAAALLSSLMEQNWVKTDASRILEGWVEKIIVDKNKSEIELRSLSGVKKVKVDPGLQCFAGAGECQLRDTLDYRAEVLLNQKKQAACISIIEKRKFIAVEDKITGTVKSVLIGLDSVLVLRDLNCEERRLPLSWGALIDSEGKAKAKDFTSLKPGTFVTAQLAEGQVQKVTVLETKTISGTIQDLSGRRLTLAKKGSSSQIGKPEWFNYWDRARMVDKDGRAIGGVSRGDAIKVTYLDPNPGEIDDEIPLEIMLSSRPALKKVKAEVEKLTILDNYYKLTVKKNKVYEVDKTVQVYSSNGGEIQFNSLNAGDKVEMEVDGAGVVMKIILL
>NC_008346.1|WP_011641134.1|1985107_1985695_+|amino-acid-ABC-transporter-permease
MRRSHLKTLSGIAQVYIRLVQGIPIVLLLMILYYILFAQVDIDPVLIAVVGFSLNFSAYAAEIFRTAIDATDKGQLEAAYALGFSQYAGFFKVTLPQAMLHILPIYKGEFVSMVKMTSVVGYIAIQDLTKMSDIIRSRTFDAFFPLFATAFIYFVLTYLFIYLMGRVEIQIDPKRRKRMIKGIQAISLAEKEVSA
>NC_008346.1|WP_155814189.1|1984925_1985126_+|hypothetical-protein
MKCIKNVRKTILILISCVLIFLVAACSGQKTEYIKSVSDLNKTGYIIGVPEGTPPEEVAAPCAAHT
>NC_008346.1|WP_011641144.1|2000509_2001787_+|IS110-family-transposase
MKNTQNQKISQIKFETLVVGIDIGKETHYARAFDYRGMELARLLKFSNTDQGFERLGQWMRDICKQQEKTGIIVGFEPTGHYWFTLGDHLKRQGHKLAIVNPFHVKRTKELDDNSPTKNDRKDPKTIAMLVKDGRYREVYIPDDIYQELREAVSERERLQEQLTSIYNRVVRWLDIRFPEFTTVFKDWRRNASLITLRSFPTPEKVMEMGVDKIVETWRKQMKRASLKRAERLVKVASRSVGRTSGKVASEVSLQNLLAEYDLYCQQYDKLEQLMQELLMQVPNADKLLDIKGVGLITAATFVGEVGDISRFQDPRQIQKLAGLNLVENSSGKHKGRTTISRRGRRRLRHSLFFSMIAILGKNQEFRLLHQRNLMRENNPLNKMQSIIALCGKLIRVFYAILIKGVDYSPEKMLGDMEQSIRVAA
>NC_008346.1|WP_011641145.1|2002711_2003461_-|CRISPR-associated-endoribonuclease-Cas6
MMLQKIILQCKYGGEQRASYNWGSLFHGILVKSLPSDIAEMLHENHLRPFSQYVLSSSNQELTWNIGLWDAEIANHIIQAVLPLVQIELQHKATTLEVTGVKRSSQNEYEYFNHYFATENPCRRYEIEFLTPCTHKQDGSYVLFPTPELIVKSLNNRYCAFMQDVSLDAPEAMEQIAKHIHIVRYSLHSAVFYLERTKITGYMGRITVVISGTEQLARLAGALLSFAEYSGLGIKTALGMGGVKIRALA
>NC_008346.1|WP_011641146.1|2003611_2004754_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MKFAHLERLNLTLRALAPVFIGSGEQLGKKEYIFDSPNALIYFPDFPRLVAFLKERSLLAEYEKFLSTPRLKDIRVFLEENGISAADYPSFVRYSIAAGEAAHIENFREVLTFIKDSKGYPYIPGSSLKGAIRTALATYLLKRGDWERDRRNIEGSDSSVPARKYLARESSTVEKKVFYQLDIRNPKDGKEISSPINDLMQGIRISDSAALSFENLTLTGKYDRKPDGTVNLLPIFRECLTPGSEAHLQLTLDLPMLARVGLNAGIIEEALHDFADEHYAHFEQYFAELPEDASVAAKEGVDIFLGGGVGYVSKTLTYNLFPQRENAVSLAAKILTKQFSPKHGHSKDASQYKVSPHILKTTMYAGEYYHMGKCELIITR
>NC_008346.1|WP_011641147.1|2004750_2005698_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MEHFLYRLNFSTALHIGKDAGGPSLDDGQMIIHADTLFAALCCEAVRGGRITQLVKYFADGILSISDALPYAGDEIFLPRPVLFTENRKRAGDSALAKALKNKDYIPLSFFGDYLKSMQQLDFNLESLKSESDFGYLTTLTRVAIKGNSPPLPYHVAAWRFADGCGLYIIVRSEQEEARTMFASLLAELGLSGIGGKQSSGWGKFEVKPGPVPDELLRLLEDKQAEYQMLMGTALPVDNELDTVLLNGWYKLLRRGGFIRSESYAARQMKKKTIYMLASGSCLRSRFKGAMLDLSDNGAHPVWRCGNTLFVGVTI
>NC_008346.1|WP_041427503.1|2005672_2006368_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYGKILIKCKMTVLTGMHIGGSSAFSAIGAVDSPVIRDSFTGEPMLPGSSLKGKMRTLLAKAIKNHYITQEPAKDPEEIKRLFGTAGDNRKQEWPKAARLQFYDAFLVNADTLKNRSGMTEVKFENTINRLTAIANPRQIERVVRGSEFAINLVYDMEDTDSLKSDFTNIARGLKLLSMDYLGGHGSRGYGKVGFTDFEVVVKEGECPEDVDLLLKILKEVEDYGAFSLQA
>NC_008346.1|WP_011641149.1|2006387_2006864_-|type-III-A-CRISPR-associated-protein-Csm2
MSNMREAFRKAGYKDTQAQTEKPSQSQPAVGQFQLGINYTAQAEQVIQELKKSMGRNYQNFTTSKIRNILAQVSEIYNDVRAENDVFLSPDLQNRIEYLKVRLVYECGREPWIIKPFVDKAKLLDLLNNIGDNRQNFIKFARYMEALVAYHRFYGGRD
>NC_008346.1|WP_011641150.1|2006856_2009283_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MHDKVKNVVIGGLLHDVGKVLHRGTRIDGRAHSHSGREWIREYTDDNRILDCIAYHHHQEIEGAGLERNNLAYVVYIADNIAAGVDRREIEGEGSRGFDRNRHQESIYNLLNNSNAKAVYKIAAISKKINYPQDIAGYNPESDYNDIYFGISEGLRGINFQGEYVNSLLELLEAYLSYIPSSTYQREVSDISLFDHSKIIAALASSIVLYLIAHNRNDYNLELFRNRHSFYKEKAFCLFSCDISGVQQFIYTISSKGALKGLRSRSFYLELLLENLVDEILSASSLYRSNLLYTGGGHAYILLPNTYEAIQKAGEAVKNTNNRLMEVFGARLFIAYGLQECSANELMSKTDNPEDYSNIFRSLAAQVSMRKLQRYSAADLRQLNHSDTDREGRECRVCGVSSGLEERQEGTICHNCAAFTDISPILIKPDSVFVVSREEIKGTSLPLFSAQGEDLKFSALKVEEVKEILKKDNDKVLRIYSKNTYRTGFSLATKLWLGDYALSNQDGDIKTFAELAESSRGIGRIGVLRADVDNMGAAFVSGFVRENAAENKYRYITLSRTATLSRSLSIFFKYYLNELLANGEFNLLAPAGQRNIVVVYAGGDDLFLVGAWNEVLCAAIDIRRAFSSYTGNTLTISAGFALFEPGYPIARMAAETAELENSAKHNQHQGGTKNSISLLGMEVIDGKLQAQHTYDWDSFENKVLGEKYAILMSIFSKAEDYGNSFLYNILDLLRQAESDSINIARLAYLLARREPGKNTADETKKSYSIFAQNVYQWALNPEDRRQLITAIIIYTYNNRDEKEVRRNE
>NC_008346.1|WP_011639746.1|2009535_2011182_+|transposase
MFKPNNDHLQGKVFSDFQRFNSVVAKRLKNSWSMVFYEQVFCLIREELFAPLYSLEWGRPNFPINILVGLEIIKHLFDYTDQELLDQYYFNYQVQYALGIENIGEIYLGERTLYNFRERVVRYSKEYPEKEALAFQQFEILTRNFLGLVGLKTDELRIDSTLISPNIKKAGRLSLAHDVLAQAVRAIPVAYRSENLNKVLEDSFKNKLLYQTKNSQLDSRLQAVLDLMSEIYVLSQNHKTIADLEKVKILLRFLNEQANCDENSGRFKAKASKEVSSDSLQSAYDTDATYRDKAGKKESGYTATFTETCNSENDVQIIVDYTVEPNNKSDVEIFQDRMDIIKDNTNASDIYADGGYYGENVINKANSKGIEIQLHYTDMTGKTAPEGQLPAHHFVFNKDMEMVQCPGGQIPSSSKYNSKTKITTSHFPKEVCNNCPHRCNCPLKEQKRDMVVRISKKSILASQVRETVNDPHIKHENISKRAAIEGTNSAIKGCQGAKRLRVRGKIKCTLQIGFKVIGHNFKQIFRALTKQIKKPKIKTKGLLCPNPN
>NC_008346.1|WP_011641153.1|2012640_2013330_-|MBL-fold-metallo-hydrolase
MAKVKEITAGVYQVGGDGLSRAEDCCVYLIDGGGESALIDAGAGRSASMIWSNIIATGIDVSSLKHIVVTHGHIDHIGGLAFLKEKLQAQVIAHSLELPAIEEGLPQLTAASWYGVTYEKVKVEQVLKGEEQRLKLGQVELICPHTPGHTPGGISPYVDITGKRVLFGQDIHGPFNQQWGSDLKEWRISMQKLLELEADILCEGHFGIYSPAAAVRKYIEGYLRQYSRK
>NC_008346.1|WP_011641154.1|2013511_2015554_+|beta-propeller-domain-containing-protein
MPVERKKSFWPGIIISLTLLLFASSLVMALDNIPATSAKKPVEPLPVVGSMENLKKLLVEYEKSSLINSGQLLRKESKMEMMNDAVTVAPLARNEMAAGGAVNLAQESAKSLVGASADYSSTNVQVQGVDEADIVKTDGNYIYQVNQQEIVVIKAVPAEQMQVVSRIKLDNEGFTPRELFLDSKRLVVLGDSRAEVYARSMPKVKTEIYPPPVYQQPSTIALIYDIADKKQIKKTRELELEGNYLSSRKIASHLYLVSNHHLDWYRIQEKEDNILPSYRDTAVSSDFKQIDCGQINYFPGEIYPAYIIIAAVDIDRNEPAQLKTCLGNGENIYASINNLYIAVSRQEPARPLLKDSNFPAPAAEIGPKTRIYRFGLQQGKVEYQGKGEVPGRILNQFSMDEEKAYFRIATTSGEIWRNDENTSKNNLYVLDQEMNITGKLEGIAPGEQIYSTRFMGDRAYMVTFRTVDPLFVIDLKDPTKPTILGKLKIPGYSDYLHPYDENHIIGFGKETIELKGRNNEAQAFYQGMKIALFDVSDVNNPREMSHEIIGDRGTDSELLRDHKALLFSREKNLLAFPVTVMTLSETDKNLPRTDFPAYGKFSFQGAYVYKIDLQHGFQLQGRISHLSPADYQRAGDYWYEDSKNIQRIIYIGKNLYTLSQDLAKSHQITDLKEVGSLSLR

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Crispr_ID: NC_008346_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_7

2002263-2002514

TypeIII

Consensus_repeat	Method
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	PILER-CR
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CRISPRCasFinder
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CRT

3 spacers

cas1,cas2,csm6,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10

The CRISPR arrays of NC_008346_7

>merge|NC_008346|7|2002263-2002514|PILER-CR,CRISPRCasFinder,CRT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATCCAAATGAACGACCCTATTAATGTGGCGTTGCAGGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATGGGCAGATAGTCAACCACTACGGTTACAGCAGAGTATACCGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAATTCAGGGTGTTTGATGATGAACTGCAGCAAAAGATGTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT

>NC_008346|7|4|2002263-2002514|PILER-CR
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCAAATGAACGACCCTATTAATGTGGCGTTGCAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GGGCAGATAGTCAACCACTACGGTTACAGCAGAGTATACC
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TCAGGGTGTTTGATGATGAACTGCAGCAAAAGAT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT

>NC_008346|7|7|2002263-2002514|CRISPRCasFinder
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCAAATGAACGACCCTATTAATGTGGCGTTGCAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GGGCAGATAGTCAACCACTACGGTTACAGCAGAGTATACC
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TCAGGGTGTTTGATGATGAACTGCAGCAAAAGAT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT

>NC_008346|7|3|2002263-2002514|CRT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	CCAAATGAACGACCCTATTAATGTGGCGTTGCAG
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	GGGCAGATAGTCAACCACTACGGTTACAGCAGAGTATACC
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT	TCAGGGTGTTTGATGATGAACTGCAGCAAAAGAT
GTTTCCGTCCCCTTAAAGGGGTCCTTCGTTTTTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_011641144.1\|2000509_2001787_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NC_008346.1\|WP_011639960.1\|1996473_1997694_-\|transposase	unknown	unknown	gnl\|CDD\|377531
NC_008346.1\|WP_049750124.1\|2015875_2016640_-\|DUF3298-and-DUF4163-domain-containing-protein	unknown	unknown	gnl\|CDD\|379356
NC_008346.1\|WP_011641138.1\|1990103_1991327_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|224437
NC_008346.1\|WP_011641141.1\|1994951_1996193_-\|hypothetical-protein	csm6	pfam09659_csm6_CAS-III-A	gnl\|CDD\|187877
NC_008346.1\|WP_011641147.1\|2004750_2005698_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	COG1567_csm4gr5_CAS-III-A	gnl\|CDD\|380071
NC_008346.1\|WP_011641143.1\|1998216_1999227_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NC_008346.1\|WP_011639746.1\|2009535_2011182_+\|transposase	unknown	unknown	gnl\|CDD\|372705
NC_008346.1\|WP_011641140.1\|1993023_1994736_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
NC_008346.1\|WP_011641139.1\|1991347_1992682_-\|acetyl-CoA-hydrolase/transferase	unknown	unknown	gnl\|CDD\|188463
NC_008346.1\|WP_011641154.1\|2013511_2015554_+\|beta-propeller-domain-containing-protein	unknown	unknown	gnl\|CDD\|378255
NC_008346.1\|WP_041427503.1\|2005672_2006368_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NC_008346.1\|WP_011641145.1\|2002711_2003461_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG5551_cas6_CAS-III	gnl\|CDD\|227838
NC_008346.1\|WP_011641149.1\|2006387_2006864_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NC_008346.1\|WP_011641142.1\|1997890_1998220_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_008346.1\|WP_011641150.1\|2006856_2009283_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NC_008346.1\|WP_011641134.1\|1985107_1985695_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NC_008346.1\|WP_011641153.1\|2012640_2013330_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NC_008346.1\|WP_011641146.1\|2003611_2004754_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NC_008346.1\|WP_041427501.1\|1988360_1989926_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_011641144.1\|2000509_2001787_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	8.96106e-28
NC_008346.1\|WP_011639960.1\|1996473_1997694_-\|transposase	gnl\|CDD\|377531	pfam05598, DUF772, Transposase domain (DUF772). This presumed domain is found at the N-terminus of many proteins found in transposons.	9.07781e-18
NC_008346.1\|WP_049750124.1\|2015875_2016640_-\|DUF3298-and-DUF4163-domain-containing-protein	gnl\|CDD\|379356	pfam13739, DUF4163, Domain of unknown function (DUF4163). The structure of this domain is and alpha-beta-two layer sandwich, identified from a Fervidobacterium nodosum Rt17-B1 like protein. The function is not known except that it is found in association with Heat-shock cognate 70kd protein 44kd ATPase, pfam11738.	9.32489e-29
NC_008346.1\|WP_011641138.1\|1990103_1991327_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|224437	COG1520, COG1520, FOG: WD40-like repeat [Function unknown].	3.83166e-12
NC_008346.1\|WP_011641141.1\|1994951_1996193_-\|hypothetical-protein	gnl\|CDD\|187877	cd09746, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems.	0
NC_008346.1\|WP_011641147.1\|2004750_2005698_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|380071	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain. Clustered, regularly interspaced, short palindromic repeat (CRISPR) loci play a pivotal role in the prokaryotic host defense system against invading genetic materials. The CRISPR loci are transcribed to produce CRISPR RNAs (crRNAs), which form interference complexes with CRISPR-associated (Cas) proteins to target the invading nucleic acid for degradation. The interference complex of the type III-A CRISPR-Cas system is composed of five Cas proteins (Csm1-Csm5) and a crRNA, and targets invading DNA. This entry represents the C-terminal domain found in Csm4. Csm4 structurally resembles Cmr3, a component of the type III-B CRISPR-Cas interference complex. Studies indicate that Csm3-Csm4 complex binds single-stranded RNA in a non-sequence-specific manner. Structural analysis show, Csm3 and Csm4 have one and two ferredoxin-like folds (also known as an RRM-like fold), respectively. The long beta-hairpin inserted into the C-terminal ferredoxin-like fold of Csm4, is well-conserved in the Cmr3 structure. The corresponding beta-hairpin of Cmr3 binds the D1 domain of Cmr2, as observed in the Cmr2-Cmr3 complex structure. Furthermore, it is suggested that the hairpin of Csm4 is responsible for the interaction with Csm1 (ortholog of Cmr2).	2.33133e-36
NC_008346.1\|WP_011641143.1\|1998216_1999227_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.35227e-111
NC_008346.1\|WP_011639746.1\|2009535_2011182_+\|transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.21254e-14
NC_008346.1\|WP_011641140.1\|1993023_1994736_+\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	1.18012e-18
NC_008346.1\|WP_011641139.1\|1991347_1992682_-\|acetyl-CoA-hydrolase/transferase	gnl\|CDD\|188463	TIGR03948, hypothetical_protein_FAEPRAM212_02812, butyryl-CoA:acetate CoA-transferase. This enzyme represents one of at least two mechanisms for reclaiming CoA from butyryl-CoA at the end of butyrate biosynthesis (an important process performed by some colonic bacteria), namely transfer of CoA to acetate. An alternate mechanism transfers the butyrate onto inorganic phosphate, after which butyrate kinase transfers the phosphate onto ADP, creating ATP. [Energy metabolism, Fermentation].	1.74914e-105
NC_008346.1\|WP_011641154.1\|2013511_2015554_+\|beta-propeller-domain-containing-protein	gnl\|CDD\|378255	pfam09826, Beta_propel, Beta propeller domain. Members of this family comprise secreted bacterial proteins containing C-terminal beta-propeller domain distantly related to WD-40 repeats. Jpred secondary-structure prediction shows family to be a series of 4 short beta-strands, characteristic of beta-propeller families.	0
NC_008346.1\|WP_041427503.1\|2005672_2006368_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.21843e-79
NC_008346.1\|WP_011641145.1\|2002711_2003461_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	4.44208e-22
NC_008346.1\|WP_011641149.1\|2006387_2006864_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	2.19491e-25
NC_008346.1\|WP_011641142.1\|1997890_1998220_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.1087e-22
NC_008346.1\|WP_011641150.1\|2006856_2009283_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
NC_008346.1\|WP_011641134.1\|1985107_1985695_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.92843e-48
NC_008346.1\|WP_011641153.1\|2012640_2013330_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	4.03427e-33
NC_008346.1\|WP_011641146.1\|2003611_2004754_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.616e-27
NC_008346.1\|WP_041427501.1\|1988360_1989926_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	1.53565e-09

>NC_008346.1|WP_011641144.1|2000509_2001787_+|IS110-family-transposase
MKNTQNQKISQIKFETLVVGIDIGKETHYARAFDYRGMELARLLKFSNTDQGFERLGQWMRDICKQQEKTGIIVGFEPTGHYWFTLGDHLKRQGHKLAIVNPFHVKRTKELDDNSPTKNDRKDPKTIAMLVKDGRYREVYIPDDIYQELREAVSERERLQEQLTSIYNRVVRWLDIRFPEFTTVFKDWRRNASLITLRSFPTPEKVMEMGVDKIVETWRKQMKRASLKRAERLVKVASRSVGRTSGKVASEVSLQNLLAEYDLYCQQYDKLEQLMQELLMQVPNADKLLDIKGVGLITAATFVGEVGDISRFQDPRQIQKLAGLNLVENSSGKHKGRTTISRRGRRRLRHSLFFSMIAILGKNQEFRLLHQRNLMRENNPLNKMQSIIALCGKLIRVFYAILIKGVDYSPEKMLGDMEQSIRVAA
>NC_008346.1|WP_011641143.1|1998216_1999227_-|CRISPR-associated-endonuclease-Cas1
MSFLYVYERSAKIGVQENCVVVESKKENLKRILPIEGVENVIIFGDASLSSNCVKQFMERDINLTWLSSRGKFYGRLESTRNVNIYRQRKQFACGEDDEFCLALAKRIILAKVKNQITILRRYRRNRPEKSVQKIIDAMAKLLPIMERVHNKDELMGHEGMAARYYYQGLAELVEPDFAFSGRNRQPPRDPFNSLLSFAYTLLMYDLYTAAVNRGLNPYASFLHSIRRGHPALCSDLMEEWRAILADSLALYVTSKGIIKRENFEKPNEEGGVYLDGIGSKAFIAEYEKKVRGRSNYLAYVDYSVSFRRAMEMQCQRLAKAIEEGDPSIYQPVVIR
>NC_008346.1|WP_011641142.1|1997890_1998220_-|CRISPR-associated-endonuclease-Cas2
MIHSTNRIFLFDEFIAEERRKYLVVVIYDIVDNRRRAAFAKYLKGFGVRVQKSAFECILPDAKYQKLLKGIPKLIDKEDQVRVYKLTSNADIRAWGTVELLEEEEVVIL
>NC_008346.1|WP_011639960.1|1996473_1997694_-|transposase
MNIRQNCIFSFEDALKIQPKSRLEKIINTLDLKPVLCKLDKPGEIRVGPKPYPAYAMLNALIAMRLENMGTFTQLVERLTYDPHLRYVCGFEPFGTAPSKSCFSRFYSKLAQSGCLETLFTSLVKQAEEMGLLDLSSVAIDATKVEAYEKSVPRKNIIQDGNAADWGIKSDTNGNPIKWFGYKLHIGTDVRSGLPIAMKVTPANCSDSSVALELVEKCCANTQSKIVYFLMDAGYDHREIYSVIRDKYHAQAIIALNKRGAKQPPEGFDWDGTPICSARYRMVYWGSYQGVNKFRCPHIMGKCDCPFGSAWCSDSNYGMVVKTKVKDDPRLFSSPHRGSANWQKQYNLRTYSERCFSRFKENLGLEDGLNVRKITKVETHAYLCAITMIAAVIAINQDSSTRSSAA
>NC_008346.1|WP_011641141.1|1994951_1996193_-|hypothetical-protein
MTKRVCELADQNDRYRVHAMELCKKESYDCEIIELRYEEIDNPQQFDIFYPVFEKELIDIHNANPGCEILINLSSGTPQMKSACHLLALTTPFPVIPIQVTTPNESENYGSANYDLETSWKNNLDNDPELGTNNRTQLVESDNLRYLFLREAAISNINAFNYSSALAILASVAEFVPEDVIHLLMAAQHRKNMDLREAKKRSRLANYDLFPVKSGDAQELFEYLLLLDLQQNSGQLMDFVRGISPALSRLFECFLREKCQRQVKLDYCVNKRHEPDHYWLKRDKLAEKDPSLLCYYDLRFPNGFRDSDLSCSTLLPMIEFDCRPGGRFPNEKVLLKAQYMRSVEEKIRNPAAHNIVAVKEKQFMQLVGISSASLVKDMQWMFKITYPQYFNTLENVWNSYNRMNEYIISRLKA
>NC_008346.1|WP_011641140.1|1993023_1994736_+|IS1634-family-transposase
MRLSISKSKNSTSLYVIKSTYENGIHSSKVVESLGTVEELNKKLDGRDPIEWAKEYIAKLNEKEKLNKREVLVKYSPVKIIDKGQQRLFNGGYLFLQKIYHELKLDKMCWAIAKKYNFSYDLNSILSRLVYARVIYPSSKLSTYQLSSRFMEQPSFDLHQIYRALEIIAKEADSIQASLYSNSLAVSKRNTRVLYYDCTNYFFEIEQESGIKQYGYSKEHRPNPIVQMGLFMDGDGVPLAVYIGKGNTNEQLTLKPLEKKILSDFNCSKFIVCTDAGLASNSNRQFNNQGERAFITTQSIKKLKKHLKEWALSPEGWHLPDDSSIYSLDKIDEKKDLEKIFYKERWIVEDGLEQKLIVSFSLKYQNYQRKVRNAQIERARKVLDTNLGKLKKVNQNDYKRFIKKTSITPEGEVASKAVYEIDNSVIQKEEAFDGFYAVCTNLDGDTAALLTVNRRRWRIEECFRIMKSEFRARPVYLSRDDRITAHFITCFIALVVYRLLEKKLGEQYTCSEIVQGLRDMNFYEVKGEGFVPTYMRTDFTDSLHDAFGFRTDYQILTMRQMKNIFKATKS
>NC_008346.1|WP_011641139.1|1991347_1992682_-|acetyl-CoA-hydrolase/transferase
MTVVKKLSHAGSWREDYRQKLCSAEDAAALIKNNDIIAMAGGTSIPKGFATALSKRARELFNITLLQGFSLCNYEFMQPQFKEHIHIETSFVGLTERKCIQMGLATYVPIHLHKLPAWLDNRGPNVAAHAVTPPDENGYMNRSCYAGLCHRRSLENAKTVIVEVNPNTPWLCGDDFKLHVSEVDYIIENPFEMEEINDIPISENESQIAAFVADMIPDGSTIQLGLGGLANAVGHLLKEKKDLGLHAEVISNSMMQLMKLGVINNSRKNFYPGKALGCFAVGNRELWKYIDHNENFCFREVDYINDPQVIARNHGLISVNNSLMMDLTGQAASESIGSFQYSGTGGQVDFVRGAGLSPGGKSILSLNSTYKGKDGRIGSRIVPVLPEGTVVSTSRNEVQYVVTEYGVANLRWQSISERAKRLIAIAHPDFRDSLRFAARKHGWI
>NC_008346.1|WP_011641138.1|1990103_1991327_-|PQQ-binding-like-beta-propeller-repeat-protein
MENKELIRGFYNRIGIALFVVFFLLLAFPASGEAASKLEQFPAAKEAGQPGQLLWKLSGLGKLSSDIIFAPNGNLLFPSNNKLNCVNPEGKLIWEMQGKGKGMLGKPILTEAGGVYFANGSVIQEGKLNGALGWDFSVYADGKAQKTPLLARGPGNILYLPLPDALYGVDTVGHYVWMLSPWESSDGKTSKLINPRTFLACTADEQAFYLVFGDKAGNYKLAAINAQGEYLWKYWLGDISSAFLLADNEGKLYASVNFKKAAQGSKGGKLNQAKVYCFKNSSGNSPIWSNSFSVANQVTAPVLGNSKTLYFTGGNKLYALDTEKGKVLWDTPLLKLVSTPAVSQNGYIYGGSSDGDLFAVKPSGRLAWFRQLDGAVERAPLIGPDNFIYVHTAKGSLYKIKDNFKES
>NC_008346.1|WP_041427501.1|1988360_1989926_-|S-layer-homology-domain-containing-protein
MANLLVLFLMIQPVSSVMAFSDMEGHWSKPVVTRAATLDFIKGYPDNSFQPEKEISQMEALVLFMRAVGLGNEKTTAKTSKKEAPRPLKAPEVPWGQNYMDTAVKNELLDDKWISSFQADRPATRLQVVSLLCRLLQLPLPDSVSSGQNAFSDLDNTSSEYIPYIIALSQAGIMKGYEDGTFKPERSLKRSEAAALLSSLMEQNWVKTDASRILEGWVEKIIVDKNKSEIELRSLSGVKKVKVDPGLQCFAGAGECQLRDTLDYRAEVLLNQKKQAACISIIEKRKFIAVEDKITGTVKSVLIGLDSVLVLRDLNCEERRLPLSWGALIDSEGKAKAKDFTSLKPGTFVTAQLAEGQVQKVTVLETKTISGTIQDLSGRRLTLAKKGSSSQIGKPEWFNYWDRARMVDKDGRAIGGVSRGDAIKVTYLDPNPGEIDDEIPLEIMLSSRPALKKVKAEVEKLTILDNYYKLTVKKNKVYEVDKTVQVYSSNGGEIQFNSLNAGDKVEMEVDGAGVVMKIILL
>NC_008346.1|WP_011641134.1|1985107_1985695_+|amino-acid-ABC-transporter-permease
MRRSHLKTLSGIAQVYIRLVQGIPIVLLLMILYYILFAQVDIDPVLIAVVGFSLNFSAYAAEIFRTAIDATDKGQLEAAYALGFSQYAGFFKVTLPQAMLHILPIYKGEFVSMVKMTSVVGYIAIQDLTKMSDIIRSRTFDAFFPLFATAFIYFVLTYLFIYLMGRVEIQIDPKRRKRMIKGIQAISLAEKEVSA
>NC_008346.1|WP_011641145.1|2002711_2003461_-|CRISPR-associated-endoribonuclease-Cas6
MMLQKIILQCKYGGEQRASYNWGSLFHGILVKSLPSDIAEMLHENHLRPFSQYVLSSSNQELTWNIGLWDAEIANHIIQAVLPLVQIELQHKATTLEVTGVKRSSQNEYEYFNHYFATENPCRRYEIEFLTPCTHKQDGSYVLFPTPELIVKSLNNRYCAFMQDVSLDAPEAMEQIAKHIHIVRYSLHSAVFYLERTKITGYMGRITVVISGTEQLARLAGALLSFAEYSGLGIKTALGMGGVKIRALA
>NC_008346.1|WP_011641146.1|2003611_2004754_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MKFAHLERLNLTLRALAPVFIGSGEQLGKKEYIFDSPNALIYFPDFPRLVAFLKERSLLAEYEKFLSTPRLKDIRVFLEENGISAADYPSFVRYSIAAGEAAHIENFREVLTFIKDSKGYPYIPGSSLKGAIRTALATYLLKRGDWERDRRNIEGSDSSVPARKYLARESSTVEKKVFYQLDIRNPKDGKEISSPINDLMQGIRISDSAALSFENLTLTGKYDRKPDGTVNLLPIFRECLTPGSEAHLQLTLDLPMLARVGLNAGIIEEALHDFADEHYAHFEQYFAELPEDASVAAKEGVDIFLGGGVGYVSKTLTYNLFPQRENAVSLAAKILTKQFSPKHGHSKDASQYKVSPHILKTTMYAGEYYHMGKCELIITR
>NC_008346.1|WP_011641147.1|2004750_2005698_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MEHFLYRLNFSTALHIGKDAGGPSLDDGQMIIHADTLFAALCCEAVRGGRITQLVKYFADGILSISDALPYAGDEIFLPRPVLFTENRKRAGDSALAKALKNKDYIPLSFFGDYLKSMQQLDFNLESLKSESDFGYLTTLTRVAIKGNSPPLPYHVAAWRFADGCGLYIIVRSEQEEARTMFASLLAELGLSGIGGKQSSGWGKFEVKPGPVPDELLRLLEDKQAEYQMLMGTALPVDNELDTVLLNGWYKLLRRGGFIRSESYAARQMKKKTIYMLASGSCLRSRFKGAMLDLSDNGAHPVWRCGNTLFVGVTI
>NC_008346.1|WP_041427503.1|2005672_2006368_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYGKILIKCKMTVLTGMHIGGSSAFSAIGAVDSPVIRDSFTGEPMLPGSSLKGKMRTLLAKAIKNHYITQEPAKDPEEIKRLFGTAGDNRKQEWPKAARLQFYDAFLVNADTLKNRSGMTEVKFENTINRLTAIANPRQIERVVRGSEFAINLVYDMEDTDSLKSDFTNIARGLKLLSMDYLGGHGSRGYGKVGFTDFEVVVKEGECPEDVDLLLKILKEVEDYGAFSLQA
>NC_008346.1|WP_011641149.1|2006387_2006864_-|type-III-A-CRISPR-associated-protein-Csm2
MSNMREAFRKAGYKDTQAQTEKPSQSQPAVGQFQLGINYTAQAEQVIQELKKSMGRNYQNFTTSKIRNILAQVSEIYNDVRAENDVFLSPDLQNRIEYLKVRLVYECGREPWIIKPFVDKAKLLDLLNNIGDNRQNFIKFARYMEALVAYHRFYGGRD
>NC_008346.1|WP_011641150.1|2006856_2009283_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MHDKVKNVVIGGLLHDVGKVLHRGTRIDGRAHSHSGREWIREYTDDNRILDCIAYHHHQEIEGAGLERNNLAYVVYIADNIAAGVDRREIEGEGSRGFDRNRHQESIYNLLNNSNAKAVYKIAAISKKINYPQDIAGYNPESDYNDIYFGISEGLRGINFQGEYVNSLLELLEAYLSYIPSSTYQREVSDISLFDHSKIIAALASSIVLYLIAHNRNDYNLELFRNRHSFYKEKAFCLFSCDISGVQQFIYTISSKGALKGLRSRSFYLELLLENLVDEILSASSLYRSNLLYTGGGHAYILLPNTYEAIQKAGEAVKNTNNRLMEVFGARLFIAYGLQECSANELMSKTDNPEDYSNIFRSLAAQVSMRKLQRYSAADLRQLNHSDTDREGRECRVCGVSSGLEERQEGTICHNCAAFTDISPILIKPDSVFVVSREEIKGTSLPLFSAQGEDLKFSALKVEEVKEILKKDNDKVLRIYSKNTYRTGFSLATKLWLGDYALSNQDGDIKTFAELAESSRGIGRIGVLRADVDNMGAAFVSGFVRENAAENKYRYITLSRTATLSRSLSIFFKYYLNELLANGEFNLLAPAGQRNIVVVYAGGDDLFLVGAWNEVLCAAIDIRRAFSSYTGNTLTISAGFALFEPGYPIARMAAETAELENSAKHNQHQGGTKNSISLLGMEVIDGKLQAQHTYDWDSFENKVLGEKYAILMSIFSKAEDYGNSFLYNILDLLRQAESDSINIARLAYLLARREPGKNTADETKKSYSIFAQNVYQWALNPEDRRQLITAIIIYTYNNRDEKEVRRNE
>NC_008346.1|WP_011639746.1|2009535_2011182_+|transposase
MFKPNNDHLQGKVFSDFQRFNSVVAKRLKNSWSMVFYEQVFCLIREELFAPLYSLEWGRPNFPINILVGLEIIKHLFDYTDQELLDQYYFNYQVQYALGIENIGEIYLGERTLYNFRERVVRYSKEYPEKEALAFQQFEILTRNFLGLVGLKTDELRIDSTLISPNIKKAGRLSLAHDVLAQAVRAIPVAYRSENLNKVLEDSFKNKLLYQTKNSQLDSRLQAVLDLMSEIYVLSQNHKTIADLEKVKILLRFLNEQANCDENSGRFKAKASKEVSSDSLQSAYDTDATYRDKAGKKESGYTATFTETCNSENDVQIIVDYTVEPNNKSDVEIFQDRMDIIKDNTNASDIYADGGYYGENVINKANSKGIEIQLHYTDMTGKTAPEGQLPAHHFVFNKDMEMVQCPGGQIPSSSKYNSKTKITTSHFPKEVCNNCPHRCNCPLKEQKRDMVVRISKKSILASQVRETVNDPHIKHENISKRAAIEGTNSAIKGCQGAKRLRVRGKIKCTLQIGFKVIGHNFKQIFRALTKQIKKPKIKTKGLLCPNPN
>NC_008346.1|WP_011641153.1|2012640_2013330_-|MBL-fold-metallo-hydrolase
MAKVKEITAGVYQVGGDGLSRAEDCCVYLIDGGGESALIDAGAGRSASMIWSNIIATGIDVSSLKHIVVTHGHIDHIGGLAFLKEKLQAQVIAHSLELPAIEEGLPQLTAASWYGVTYEKVKVEQVLKGEEQRLKLGQVELICPHTPGHTPGGISPYVDITGKRVLFGQDIHGPFNQQWGSDLKEWRISMQKLLELEADILCEGHFGIYSPAAAVRKYIEGYLRQYSRK
>NC_008346.1|WP_011641154.1|2013511_2015554_+|beta-propeller-domain-containing-protein
MPVERKKSFWPGIIISLTLLLFASSLVMALDNIPATSAKKPVEPLPVVGSMENLKKLLVEYEKSSLINSGQLLRKESKMEMMNDAVTVAPLARNEMAAGGAVNLAQESAKSLVGASADYSSTNVQVQGVDEADIVKTDGNYIYQVNQQEIVVIKAVPAEQMQVVSRIKLDNEGFTPRELFLDSKRLVVLGDSRAEVYARSMPKVKTEIYPPPVYQQPSTIALIYDIADKKQIKKTRELELEGNYLSSRKIASHLYLVSNHHLDWYRIQEKEDNILPSYRDTAVSSDFKQIDCGQINYFPGEIYPAYIIIAAVDIDRNEPAQLKTCLGNGENIYASINNLYIAVSRQEPARPLLKDSNFPAPAAEIGPKTRIYRFGLQQGKVEYQGKGEVPGRILNQFSMDEEKAYFRIATTSGEIWRNDENTSKNNLYVLDQEMNITGKLEGIAPGEQIYSTRFMGDRAYMVTFRTVDPLFVIDLKDPTKPTILGKLKIPGYSDYLHPYDENHIIGFGKETIELKGRNNEAQAFYQGMKIALFDVSDVNNPREMSHEIIGDRGTDSELLRDHKALLFSREKNLLAFPVTVMTLSETDKNLPRTDFPAYGKFSFQGAYVYKIDLQHGFQLQGRISHLSPADYQRAGDYWYEDSKNIQRIIYIGKNLYTLSQDLAKSHQITDLKEVGSLSLR
>NC_008346.1|WP_049750124.1|2015875_2016640_-|DUF3298-and-DUF4163-domain-containing-protein
MVRKVRSITILGVLMALVMSCLGCSGNLPVAKQDSPIKISTEEIKDKKDNLELSLKIPVLSEMKDEKLQQSLNDRFRNLFLQRRDEMLAEREEMAKELDEEDKDNPFADIPYSLASDYKVIYNNNGLLSLYFDKYEFLGGAHGMTYRIPCNIDLRDGSELELSDIFKPDSNYEDLIDKAIQAEIAKNPENYYEPEMGGFKGIEDDQTFTLQPGGITIYFQLSDIAPYAAGIPEFKIPFSEFGDMVDPELQKRLE

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Crispr_ID: NC_008346_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_8

2055857-2058259

TypeI-B

Consensus_repeat	Method
ATTTCAATACATCAAATGTGCCGGTTCCGC	PILER-CR
ATTTCAATACATCAAATGTGCCGGTTCCGC	CRISPRCasFinder
ATTTCAATACATCAAATGTGCCGGTTCCGC	CRT
ATTTCAATACATCAAATGTGCCGGTTCCGC	PILER-CR

36 spacers

cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1

The CRISPR arrays of NC_008346_8

>merge|NC_008346|8|2055857-2058259|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
ATTTCAATACATCAAATGTGCCGGTTCCGCCTGCCCACGGGTTCCAGGTTCCCAGCCATGAGGATTTCAATACATCAAATGTGCCGGTTCCGCACTAAAAACGTCATGAATATCTCAGTAGGGCATGAATTTCAATACATCAAATGTGCCGGTTCCGCGCAAATCAAATATGAGTTTCTGGAGTCAGTAGACCCATTTCAATACATCAAATGTGCCGGTTCCGCTTGGGCTGATCGATCCTAACTACGGCCATAATCCCGAATTTCAATACATCAAATGTGCCGGTTCCGCGATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGTATTTCAATACATCAAATGTGCCGGTTCCGCCAGAATCAGTTTCAACGATGAAATAACCCTAAACCTATTTCAATACATCAAATGTGCCGGTTCCGCGGAGCGGAAGAAAAAACAATGGACCATGCACGAATTATTTCAATACATCAAATGTGCCGGTTCCGCGATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGTATTTCAATACATCAAATGTGCCGGTTCCTCTTAACTGCCAGGCTCCACTCCTGGATGCCGATTCCCTATTTCAATACATCAAATGTATCGGTTCCGCCGAGTCATTAAAAAGCTATATTGACGCGACAAGCATATTTCAATACATCAAATGTGCCGGTTCCGCGTATGTGACTCGCGGAATAGACAACCCCAGGGCTTTATTTCAATACATCAAATGTGCCGGTTCCGCAATAAGTATAGTTTGTCCGCCGCTCTTGGACGGACTAATTTCAATACATCAAATGTGCCGGTTCCGCCTTGACTTGCTTTTCACTGCCAACCAGTTCCGGCAGATTTCAATACATCAAATGTGCCGGTTCCGCTGCAACCTTCCCTGAGCATTTCTGTATCTTCTTCATATTTCAATACATCAAATGTGCCGGTTCCGCGCCGGGTAGCTGATTAAATCTTGCTAATGGTTTGCTAAATTTCAATACATCAAATGTGCCGGTTCCGCAGAATCCGAAAACAGCGAGAGGAGGGAATCAATAGAATTTCAATACATCAAATGTGCCGGTTCCGCGAATATGTTAATAACCAACTGGACATATTCTACAAATTTCAATACATCAAATGTGCCGGTTCCGCCATACAGGTCAACGAACATTCCTTCGGCAAGGTACAATTTCAATACATCAAATGTGCCGGTTCCGCGGCTGAGTAATAAAGTGTCTGGCCAGGAAATCTTGATTTCAATACATCAAATGTGCCGGTTCCGCGGCCGAATTGCTGGCAAATAGAGCAGGCAGTAAGGTATTTCAATACATCAAATGTGCCGGTTCCGCCTGTTACATCGTCCTCAGTTCTTTTTCGGTAGCATCAATTTCAATACATCAAATGTGCCGGTTCCGCTAAGATTAAAAAAAGGGATGGAGAAATTGTAGATTTATTTCAATACATCAAATGTGCCGGTTCCGCGTCCATGATCTCCGCAACTGCAATGGCTTTGGCGGTATTTCAATACATCAAATGTGCCGGTTCCGCTTTTGCCCTCAGCGTAAAGGTCCGCTTCTTTGGCATATTTCAATACATCAAATGTGCCGGTTCCGCCGGACGGCAATATTAAAACAGCCCTGCAAGGCATTCGATTTCAATACATCAAATGTGCCGGTTCCGCTTATACCCGCCTCCAGATAAACAAAGAGTAGATACATTTCAATACATCAAATGTGCCGGTTCCGCACAGAACACACGGCGGAAAAAAGAGTTTTCAAAAGATTTCAATACATCAAATGTGCCGGTTCCGCATAACAGGCGATTACTGGGAGGGAATAAGAAAGTTATTTCAATACATCAAATGTGCCGGTTCCGCCCAGGCTTGAAAGGGGTGTGAATAATGCTGAACAAATTTCAATACATCAAATGTGCCGGTTCCGCAATAGTATTTTTGAAGGGAAAGCCCTGATTGATGTATTTCAATACATCAAATGTGCCGGTTCCGCGGCGTTAAAAGCATTTTCGGCGGGGTTTGGGAAGCAAATTTCAATACATCAAATGTGCCGGTTCCGCTATTAAGAAATCCCGGGCCGCATTCTTGATTTTGCAATTTCAATACATCAAATGTGCCGGTTCCGCAGTGGCGGGAAATAGTAGAAAAGTTCTTGATTGCCAAATTTCAATACATCAAATGTGCCGGTTCCGCGGGAGTGAATAGCCCCTGCAAAACAAAATAATCGCATATTTCAATACATCAAATGTGCCGGTTCCGCTGGTGTTGTGTTCGGATATTTCGGCTTGATTACCCGATTTCAATACATCAAATGTGCCGGTTCCGCGCAAGGTGAGATATTGGGCTTACGTTGGCAAGACGTATTTCAATACATCAAATGTGCCGGTTCCGC

>NC_008346|8|5|2055857-2056344|PILER-CR
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTGCCCACGGGTTCCAGGTTCCCAGCCATGAGG
ATTTCAATACATCAAATGTGCCGGTTCCGC	ACTAAAAACGTCATGAATATCTCAGTAGGGCATGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCAAATCAAATATGAGTTTCTGGAGTCAGTAGACCC
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTGGGCTGATCGATCCTAACTACGGCCATAATCCCGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CAGAATCAGTTTCAACGATGAAATAACCCTAAACCT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGAGCGGAAGAAAAAACAATGGACCATGCACGAATT
ATTTCAATACATCAAATGTGCCGGTTCCGCGATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGTATTTCAATACATCAAATGTGCCGGTTCCTCTTAACTGCCAGGCTCCACTCCTGGATGCCGATTCCCTATTTCAATACATCAAATGTATCGGTTCCGCCGAGTCATTAAAAAGCTATATTGACGCGACAAGCATATTTCAATACATCAAATGTGCCGGTTCCGC	GTATGTGACTCGCGGAATAGACAACCCCAGGGCTTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	AATAAGTATAGTTTGTCCGCCGCTCTTGGACGGACTA
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTTGACTTGCTTTTCACTGCCAACCAGTTCCGGCAG
ATTTCAATACATCAAATGTGCCGGTTCCGC	TGCAACCTTCCCTGAGCATTTCTGTATCTTCTTCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCCGGGTAGCTGATTAAATCTTGCTAATGGTTTGCTAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AGAATCCGAAAACAGCGAGAGGAGGGAATCAATAGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GAATATGTTAATAACCAACTGGACATATTCTACAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	CATACAGGTCAACGAACATTCCTTCGGCAAGGTACA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCTGAGTAATAAAGTGTCTGGCCAGGAAATCTTG
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCCGAATTGCTGGCAAATAGAGCAGGCAGTAAGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTGTTACATCGTCCTCAGTTCTTTTTCGGTAGCATCA
ATTTCAATACATCAAATGTGCCGGTTCCGC	TAAGATTAAAAAAAGGGATGGAGAAATTGTAGATTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GTCCATGATCTCCGCAACTGCAATGGCTTTGGCGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTTTGCCCTCAGCGTAAAGGTCCGCTTCTTTGGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CGGACGGCAATATTAAAACAGCCCTGCAAGGCATTCG
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTATACCCGCCTCCAGATAAACAAAGAGTAGATAC
ATTTCAATACATCAAATGTGCCGGTTCCGC	ACAGAACACACGGCGGAAAAAAGAGTTTTCAAAAG
ATTTCAATACATCAAATGTGCCGGTTCCGC	ATAACAGGCGATTACTGGGAGGGAATAAGAAAGTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CCAGGCTTGAAAGGGGTGTGAATAATGCTGAACAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AATAGTATTTTTGAAGGGAAAGCCCTGATTGATGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCGTTAAAAGCATTTTCGGCGGGGTTTGGGAAGCAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	TATTAAGAAATCCCGGGCCGCATTCTTGATTTTGCA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AGTGGCGGGAAATAGTAGAAAAGTTCTTGATTGCCAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGGAGTGAATAGCCCCTGCAAAACAAAATAATCGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	TGGTGTTGTGTTCGGATATTTCGGCTTGATTACCCG
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCAAGGTGAGATATTGGGCTTACGTTGGCAAGACGT


>NC_008346|8|8|2055857-2058259|CRISPRCasFinder
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTGCCCACGGGTTCCAGGTTCCCAGCCATGAGG
ATTTCAATACATCAAATGTGCCGGTTCCGC	ACTAAAAACGTCATGAATATCTCAGTAGGGCATGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCAAATCAAATATGAGTTTCTGGAGTCAGTAGACCC
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTGGGCTGATCGATCCTAACTACGGCCATAATCCCGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CAGAATCAGTTTCAACGATGAAATAACCCTAAACCT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGAGCGGAAGAAAAAACAATGGACCATGCACGAATT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGT
ATTTCAATACATCAAATGTGCCGGTTCCTC	TTAACTGCCAGGCTCCACTCCTGGATGCCGATTCCCT
ATTTCAATACATCAAATGTATCGGTTCCGC	CGAGTCATTAAAAAGCTATATTGACGCGACAAGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GTATGTGACTCGCGGAATAGACAACCCCAGGGCTTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	AATAAGTATAGTTTGTCCGCCGCTCTTGGACGGACTA
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTTGACTTGCTTTTCACTGCCAACCAGTTCCGGCAG
ATTTCAATACATCAAATGTGCCGGTTCCGC	TGCAACCTTCCCTGAGCATTTCTGTATCTTCTTCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCCGGGTAGCTGATTAAATCTTGCTAATGGTTTGCTAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AGAATCCGAAAACAGCGAGAGGAGGGAATCAATAGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GAATATGTTAATAACCAACTGGACATATTCTACAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	CATACAGGTCAACGAACATTCCTTCGGCAAGGTACA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCTGAGTAATAAAGTGTCTGGCCAGGAAATCTTG
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCCGAATTGCTGGCAAATAGAGCAGGCAGTAAGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTGTTACATCGTCCTCAGTTCTTTTTCGGTAGCATCA
ATTTCAATACATCAAATGTGCCGGTTCCGC	TAAGATTAAAAAAAGGGATGGAGAAATTGTAGATTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GTCCATGATCTCCGCAACTGCAATGGCTTTGGCGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTTTGCCCTCAGCGTAAAGGTCCGCTTCTTTGGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CGGACGGCAATATTAAAACAGCCCTGCAAGGCATTCG
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTATACCCGCCTCCAGATAAACAAAGAGTAGATAC
ATTTCAATACATCAAATGTGCCGGTTCCGC	ACAGAACACACGGCGGAAAAAAGAGTTTTCAAAAG
ATTTCAATACATCAAATGTGCCGGTTCCGC	ATAACAGGCGATTACTGGGAGGGAATAAGAAAGTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CCAGGCTTGAAAGGGGTGTGAATAATGCTGAACAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AATAGTATTTTTGAAGGGAAAGCCCTGATTGATGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCGTTAAAAGCATTTTCGGCGGGGTTTGGGAAGCAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	TATTAAGAAATCCCGGGCCGCATTCTTGATTTTGCA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AGTGGCGGGAAATAGTAGAAAAGTTCTTGATTGCCAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGGAGTGAATAGCCCCTGCAAAACAAAATAATCGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	TGGTGTTGTGTTCGGATATTTCGGCTTGATTACCCG
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCAAGGTGAGATATTGGGCTTACGTTGGCAAGACGT
ATTTCAATACATCAAATGTGCCGGTTCCGC

>NC_008346|8|4|2055857-2058259|CRT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTGCCCACGGGTTCCAGGTTCCCAGCCATGAGG
ATTTCAATACATCAAATGTGCCGGTTCCGC	ACTAAAAACGTCATGAATATCTCAGTAGGGCATGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCAAATCAAATATGAGTTTCTGGAGTCAGTAGACCC
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTGGGCTGATCGATCCTAACTACGGCCATAATCCCGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CAGAATCAGTTTCAACGATGAAATAACCCTAAACCT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGAGCGGAAGAAAAAACAATGGACCATGCACGAATT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGT
ATTTCAATACATCAAATGTGCCGGTTCCTC	TTAACTGCCAGGCTCCACTCCTGGATGCCGATTCCCT
ATTTCAATACATCAAATGTATCGGTTCCGC	CGAGTCATTAAAAAGCTATATTGACGCGACAAGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GTATGTGACTCGCGGAATAGACAACCCCAGGGCTTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	AATAAGTATAGTTTGTCCGCCGCTCTTGGACGGACTA
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTTGACTTGCTTTTCACTGCCAACCAGTTCCGGCAG
ATTTCAATACATCAAATGTGCCGGTTCCGC	TGCAACCTTCCCTGAGCATTTCTGTATCTTCTTCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCCGGGTAGCTGATTAAATCTTGCTAATGGTTTGCTAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AGAATCCGAAAACAGCGAGAGGAGGGAATCAATAGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GAATATGTTAATAACCAACTGGACATATTCTACAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	CATACAGGTCAACGAACATTCCTTCGGCAAGGTACA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCTGAGTAATAAAGTGTCTGGCCAGGAAATCTTG
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCCGAATTGCTGGCAAATAGAGCAGGCAGTAAGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTGTTACATCGTCCTCAGTTCTTTTTCGGTAGCATCA
ATTTCAATACATCAAATGTGCCGGTTCCGC	TAAGATTAAAAAAAGGGATGGAGAAATTGTAGATTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GTCCATGATCTCCGCAACTGCAATGGCTTTGGCGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTTTGCCCTCAGCGTAAAGGTCCGCTTCTTTGGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CGGACGGCAATATTAAAACAGCCCTGCAAGGCATTCG
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTATACCCGCCTCCAGATAAACAAAGAGTAGATAC
ATTTCAATACATCAAATGTGCCGGTTCCGC	ACAGAACACACGGCGGAAAAAAGAGTTTTCAAAAG
ATTTCAATACATCAAATGTGCCGGTTCCGC	ATAACAGGCGATTACTGGGAGGGAATAAGAAAGTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CCAGGCTTGAAAGGGGTGTGAATAATGCTGAACAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AATAGTATTTTTGAAGGGAAAGCCCTGATTGATGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCGTTAAAAGCATTTTCGGCGGGGTTTGGGAAGCAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	TATTAAGAAATCCCGGGCCGCATTCTTGATTTTGCA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AGTGGCGGGAAATAGTAGAAAAGTTCTTGATTGCCAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGGAGTGAATAGCCCCTGCAAAACAAAATAATCGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	TGGTGTTGTGTTCGGATATTTCGGCTTGATTACCCG
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCAAGGTGAGATATTGGGCTTACGTTGGCAAGACGT
ATTTCAATACATCAAATGTGCCGGTTCCGC

>NC_008346|8|6|2056513-2058259|PILER-CR
	CTGCCCACGGGTTCCAGGTTCCCAGCCATGAGG
ATTTCAATACATCAAATGTGCCGGTTCCGC	ACTAAAAACGTCATGAATATCTCAGTAGGGCATGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCAAATCAAATATGAGTTTCTGGAGTCAGTAGACCC
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTGGGCTGATCGATCCTAACTACGGCCATAATCCCGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CAGAATCAGTTTCAACGATGAAATAACCCTAAACCT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGAGCGGAAGAAAAAACAATGGACCATGCACGAATT
ATTTCAATACATCAAATGTGCCGGTTCCGCGATGCTGAGGCCGTTACCGGGTTGGGGCGACTGGTATTTCAATACATCAAATGTGCCGGTTCCTCTTAACTGCCAGGCTCCACTCCTGGATGCCGATTCCCTATTTCAATACATCAAATGTATCGGTTCCGCCGAGTCATTAAAAAGCTATATTGACGCGACAAGCATATTTCAATACATCAAATGTGCCGGTTCCGC	GTATGTGACTCGCGGAATAGACAACCCCAGGGCTTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	AATAAGTATAGTTTGTCCGCCGCTCTTGGACGGACTA
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTTGACTTGCTTTTCACTGCCAACCAGTTCCGGCAG
ATTTCAATACATCAAATGTGCCGGTTCCGC	TGCAACCTTCCCTGAGCATTTCTGTATCTTCTTCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCCGGGTAGCTGATTAAATCTTGCTAATGGTTTGCTAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AGAATCCGAAAACAGCGAGAGGAGGGAATCAATAGA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GAATATGTTAATAACCAACTGGACATATTCTACAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	CATACAGGTCAACGAACATTCCTTCGGCAAGGTACA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCTGAGTAATAAAGTGTCTGGCCAGGAAATCTTG
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCCGAATTGCTGGCAAATAGAGCAGGCAGTAAGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CTGTTACATCGTCCTCAGTTCTTTTTCGGTAGCATCA
ATTTCAATACATCAAATGTGCCGGTTCCGC	TAAGATTAAAAAAAGGGATGGAGAAATTGTAGATTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GTCCATGATCTCCGCAACTGCAATGGCTTTGGCGGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTTTGCCCTCAGCGTAAAGGTCCGCTTCTTTGGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CGGACGGCAATATTAAAACAGCCCTGCAAGGCATTCG
ATTTCAATACATCAAATGTGCCGGTTCCGC	TTATACCCGCCTCCAGATAAACAAAGAGTAGATAC
ATTTCAATACATCAAATGTGCCGGTTCCGC	ACAGAACACACGGCGGAAAAAAGAGTTTTCAAAAG
ATTTCAATACATCAAATGTGCCGGTTCCGC	ATAACAGGCGATTACTGGGAGGGAATAAGAAAGTT
ATTTCAATACATCAAATGTGCCGGTTCCGC	CCAGGCTTGAAAGGGGTGTGAATAATGCTGAACAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AATAGTATTTTTGAAGGGAAAGCCCTGATTGATGT
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGCGTTAAAAGCATTTTCGGCGGGGTTTGGGAAGCAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	TATTAAGAAATCCCGGGCCGCATTCTTGATTTTGCA
ATTTCAATACATCAAATGTGCCGGTTCCGC	AGTGGCGGGAAATAGTAGAAAAGTTCTTGATTGCCAA
ATTTCAATACATCAAATGTGCCGGTTCCGC	GGGAGTGAATAGCCCCTGCAAAACAAAATAATCGCAT
ATTTCAATACATCAAATGTGCCGGTTCCGC	TGGTGTTGTGTTCGGATATTTCGGCTTGATTACCCG
ATTTCAATACATCAAATGTGCCGGTTCCGC	GCAAGGTGAGATATTGGGCTTACGTTGGCAAGACGT
ATTTCAATACATCAAATGTGCCGGTTCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_041427509.1\|2063573_2064557_-\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NC_008346.1\|WP_011641189.1\|2049581_2051930_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NC_008346.1\|WP_011641190.1\|2052130_2052658_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235234
NC_008346.1\|WP_011641192.1\|2053725_2054547_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|131739
NC_008346.1\|WP_011641204.1\|2069072_2070200_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235064
NC_008346.1\|WP_011641185.1\|2046620_2046929_-\|NHLP-leader-peptide-family-natural-product-precursor	unknown	unknown	gnl\|CDD\|274786
NC_008346.1\|WP_011641191.1\|2052950_2053607_+\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NC_008346.1\|WP_155814191.1\|2045894_2046467_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|131997
NC_008346.1\|WP_011641198.1\|2060376_2062761_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224124
NC_008346.1\|WP_011641203.1\|2067762_2069076_+\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011641201.1\|2064531_2066295_-\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NC_008346.1\|WP_011641202.1\|2066299_2066992_-\|CRISPR-associated-endoribonuclease-Cas6	unknown	unknown	gnl\|CDD\|273848
NC_008346.1\|WP_011641188.1\|2049227_2049560_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NC_008346.1\|WP_011641197.1\|2059888_2060377_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_008346.1\|WP_041427508.1\|2054712_2055513_-\|membrane-protein	unknown	unknown	gnl\|CDD\|377672
NC_008346.1\|WP_011641196.1\|2058722_2059724_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NC_008346.1\|WP_049750184.1\|2047443_2048787_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NC_008346.1\|WP_011641195.1\|2058438_2058726_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_008346.1\|WP_011641199.1\|2062820_2063561_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NC_008346.1\|WP_011641187.1\|2048787_2049192_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379279

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_041427509.1\|2063573_2064557_-\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	6.43723e-32
NC_008346.1\|WP_011641189.1\|2049581_2051930_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	3.51765e-18
NC_008346.1\|WP_011641190.1\|2052130_2052658_-\|hypothetical-protein	gnl\|CDD\|235234	PRK04164, PRK04164, hypothetical protein; Provisional.	3.10893e-16
NC_008346.1\|WP_011641192.1\|2053725_2054547_+\|HD-domain-containing-protein	gnl\|CDD\|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	3.95246e-37
NC_008346.1\|WP_011641204.1\|2069072_2070200_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235064	PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated.	2.46624e-127
NC_008346.1\|WP_011641185.1\|2046620_2046929_-\|NHLP-leader-peptide-family-natural-product-precursor	gnl\|CDD\|274786	TIGR03793, TOMM_pelo, NHLP leader peptide domain. This model represents a domain that is conserved among a large number of putative ribosomal natural products (RNP) precursor, including the thiazole/oxazole-modified microcins (TOMMs). As a leader peptide domain, likely to be removed from the mature product, this domain is unusual in several ways. First, it is longer than most previously described RNP leader peptides. Second, most of the domain is homologous to nitrile hydratase alpha subunits. Finally, it appears that this domain correlates with a specific family of cleavage/export proteins while members undergo modifications by different classes of peptide maturase, including cyclodehydratases, lantibiotic synthases, radical SAM peptide maturases. This family is expanded especially in Pelotomaculum thermopropionicum SI. [Cellular processes, Biosynthesis of natural products].	6.82856e-35
NC_008346.1\|WP_011641191.1\|2052950_2053607_+\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	1.94262e-10
NC_008346.1\|WP_155814191.1\|2045894_2046467_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|131997	TIGR02952, RNA_polymerase_sigma-70_factor_ECF_subfamily, RNA polymerase sigma-70 factor, TIGR02952 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is found in a limited number of Gram-positive bacterial lineages.	2.70177e-41
NC_008346.1\|WP_011641198.1\|2060376_2062761_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.56461e-29
NC_008346.1\|WP_011641202.1\|2066299_2066992_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.20385e-08
NC_008346.1\|WP_011641188.1\|2049227_2049560_+\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	4.21009e-29
NC_008346.1\|WP_011641197.1\|2059888_2060377_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.79601e-59
NC_008346.1\|WP_041427508.1\|2054712_2055513_-\|membrane-protein	gnl\|CDD\|377672	pfam06541, ABC_trans_CmpB, Putative ABC-transporter type IV. CmpB is a family of membrane proteins that are likely to be part of a two-component type IV ABC-transporter system. Families can transport multiple drugs including ethidium and fluoroquinolones. UniProtKB:Q83XH0 is a member of TCDB family 3.A.1.121.4.	2.31965e-66
NC_008346.1\|WP_011641196.1\|2058722_2059724_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.25405e-137
NC_008346.1\|WP_049750184.1\|2047443_2048787_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	3.6145e-65
NC_008346.1\|WP_011641195.1\|2058438_2058726_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.40536e-25
NC_008346.1\|WP_011641199.1\|2062820_2063561_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	1.0359e-41
NC_008346.1\|WP_011641187.1\|2048787_2049192_+\|ATP-binding-protein	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	1.66483e-31

>NC_008346.1|WP_041427508.1|2054712_2055513_-|membrane-protein
MEKIICLFFIYAFLGWCTEVIYAGVNRGVFVNRGFLNGPICPIYGFGVLTVLICLLPLHENLLLLYVGSVVLTSLLELLSGFLMEKFFHQRWWDYSDEPFNIGGYICLKFSLLWGFACVLIVEVVHPLINQVLASVPDRLSLPFLLVFSSVFVIDNVVTVVTVAKLNQRLQQLDEVARALRRVSDAFGSVAADGSIALSDANEKLREDLRAKHEELIALIHMEQKRLLNAFPNIQSRKHREVMEEIKAHVRKKLEKKYVQYRSRRF
>NC_008346.1|WP_011641192.1|2053725_2054547_+|HD-domain-containing-protein
MGFKIEAELLQAMKDLKDSVPASGSERVRNEFIQILLSELPSQGIRRLLELGLLERLIPELMPAIGFDTRSSYHDKDVFEHSLAVLDNTEPNLTLRLAALLHDIDKPNSLTVDEDGEGYCYGHASGGSEIARTILGRLNFDRKTIKAVSAIIKEHMNDFENISELSIKRLIRRVGPDNIDRLFELQLADIKGSKLSSRSPERITKTRNKCFEVLSRREPLTVHDLDISGYDLFSLGYPPGKEIGEAMDYLLDQVINNPSLNQRDTLIALLMNQ
>NC_008346.1|WP_011641191.1|2052950_2053607_+|S-layer-homology-domain-containing-protein
MKTGRRIILLITLMLALMLFGGSSLLAAEASNEAQLNSNIPSDLSDHWAKDSIMQLINAGVIKGYPDGTCQPDKAISRAEFAVMLVKALKLEPKAGNTFSDTASHWAKDSIATVAAHGLVSGHNKNLFGPDEFTTREQAASVYSRLAKLESSTFDLNCTDKKSISAWAKPDVAAAVKIGFFNLYPDGSFKPQGYTTRAEAFYALYKYLSPEEPQTVKH
>NC_008346.1|WP_011641190.1|2052130_2052658_-|hypothetical-protein
MSTFVLDLLIIFGLNLFSTCMGNLKTSFLAQKTIKPVYLITFIDALVFVYAFKLIATSSGYGYILAFALGRLSGVFLANIIEKKLAFGLLEIDVYKHPEEGKILADNLREQGYSVTTTLGYGVGGKERLVLTAILPRKQFPEFHAIMEQDGKVNMSVKSITKTYGKVGSINVLAE
>NC_008346.1|WP_011641189.1|2049581_2051930_-|STAS-domain-containing-protein
MLNVAVSTRENIPLISLQGRFDGLGSQLFEQEIGLHLKEEKYWLIDFSNVNYLSSAGIRSLLKYGKMLAKVKGKLILMGLNREVKSVMEMTGVLQLFGQAEGMADALALIAREQTAQGGGQIFSAGGREYSWQLLSRQESYLDIWKAVHGSSLQGLSSSDLMAAGLDELELAFGIGGLGFDCSNAFEGLGSFLALDKMAGVLPADNYNHPDFMVVKDPQEAVVHIAAAVGFSGAPWGKLDLPEGEAITIRDIRKLISDKLQSSESQELSLLGLVILGQVQAGEGAYYRNFEDLTNNKPLKRELPRQQSMLLLGLGADSGWKAEEHLLLLMEQRGIRAGEEFFQGNALLFADLLDWENIHEPREIMNYCNELDLMQDVFMAGEDTAISAGRVWFFVPGHIRSAEEKQLEIAIRDGISFPEEWQIITRRLYADARRVVLEPLQGGFSLGKPFRVTSYDREQRRMLPTVLKIGPHSLIEKEIENHQKYVQGYILNNSTTIMGVSSCGESTGMRYNFVGISGPDSNLDWLTHRFQEKALEELIPLFDTIFTRILKPWYGQPRWEKIKPYQEHDPLLRFPVIFDFAEEKLGISVQDKTIDCPELGRVLPNPYHFLKYQYPARQSISRLWYTGINHGDLNMQNILLDERDNVYIIDFSDTRPRNIVSDFARLEPIFKFEMTLMENEQDLRSFLEFEQALARVNTLDELPPLVYHGNDPALEKVYRMTCLIRKYAKTVVIFENDILPYLLAMLEWTYPIVLYVNVTPCARKAATYSAALIVEQILRLEG
>NC_008346.1|WP_011641188.1|2049227_2049560_+|STAS-domain-containing-protein
MDIKEIKKDQATVIMVEGRLDSSTSGMLEKKLLSLMETGEKNFLLDFSGMDYISSAGLRVLLMAAKKSKTTGGKVLLSALTDNVKEVFDIAGFTDIFTIFANAEEALKDF
>NC_008346.1|WP_011641187.1|2048787_2049192_+|ATP-binding-protein
MEYRLKNELEEIRLLAEAIELWGEENGIPGKSLFQLNLALDELLTNTIIYGYPEGGEHEIRLRLVPEGEKELLIEIRDDGLAFNPLEVKAPDLKQDIEERPIGGLGIHLVRQMLDEIEYRRENGQNVLLMKKKY
>NC_008346.1|WP_049750184.1|2047443_2048787_+|SpoIIE-family-protein-phosphatase
MLINLIKNMAVIIVLAYVLTRTRAFAAMMNKQTMNWRQQATLILVFGIFSIFGTLSGININGAIANIRDLGPAIAGLVGGPLVGFGAGFIGGLHRYSLGGLTCLPCSVATVLAGLTGGLISQFKKNEFITIQEAVIFMALFEAFHMGLNLIMVKPFDQIYVIIKNVSLPMIFTNALGMGIFVFIIHNLVREKEMQKQKELIESELTVAREIQMSIIPKIFPPFPERPEFDLFAVLEPAKEVGGDLYDYFLLDDDHLCFTIGDVSGKGVPASLFMAVTKTLIKAKADIRLEPDEILYAVNNDLCADNDSGMFVTEFLGILTISSGEIVYSNGGHNLPYILRKEGTIKMLPRMAGMALGVMEEIPYSQARVKLNPGDSLVMYTDGVTEAMNDSGELFGEERLERNLAGITGYTAREEVEVILRSTRDFVQEASQSDDITILVLQFIGGK
>NC_008346.1|WP_011641185.1|2046620_2046929_-|NHLP-leader-peptide-family-natural-product-precursor
MENKTNEQAKIMGKLISRCWMDEAFKQRFITDPAAVMREAGLSLPAGVEFKVVENTDKINYVLLPVQPTELSDEQLDAVAGGDRSLSPWLTSIYIETCDLDY
>NC_008346.1|WP_155814191.1|2045894_2046467_-|sigma-70-family-RNA-polymerase-sigma-factor
MMKSSSLKNENQLLLQATIDPEAFAKIYDYYFTRVYNYVRSRVNRSSMADDLTSQIFERVLFKLDKFHPERGSFRTWLFTIAHNIITDYLRNQEKQHIVSLDMVRELACARNGPEEVYILQESQQDLQAALELLNNRERNLIGLKFWAGLNNRQIAQMTGLSESNVGVILYRSIRRLQLALKKEEACENE
>NC_008346.1|WP_011641195.1|2058438_2058726_-|CRISPR-associated-endonuclease-Cas2
MKNKLNYNYVIVFYDVGKKRVAKVFKICKQYLKHFQKSVFRGHITPANYLELKGKLLKVIDIDYDFVTFIQTISDASFNEESIGNTGINPESIIL
>NC_008346.1|WP_011641196.1|2058722_2059724_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MNSDTRYIFSTGELFQKDFSIVFRKEDGNIYFPVKDTRELYCFNEVTLSTKLMQLLAKAGIVVHFFGYYENYIGTFYPKEYLLSGRLTVAQALAYGNNRLTVAKPIVCGTAKNIHFVLYHYYRHGKSDLKEFLDWLHKSVPKLVDDTGDIKQLLRIEGAIWAGFYQTFREILPESFAMNKRVKRPPDNPINALISFGNTLLYTKTITEIYHTHLNQTISFLHEPAERRFSLSLDLSEVFKPILVYRTIFDCVNNRKITVEKHFNKSLNYALLNDAGRKTFIEAFDERLNQTFEHNTLKRRISFKQAIRLDGYKLIKYILEGKKFVPFCMEDKK
>NC_008346.1|WP_011641197.1|2059888_2060377_-|CRISPR-associated-protein-Cas4
MLTGTLVNYYTHCRRQCWLFYHHINMEDNSEDVRIGRVLHELKKQDKKEIALEGIKLDKLTAEYVTEIKKSDADIPAAMAQLEYYLIVLRDKGIMRKGRLECIEKNKQNKSIHTLTLTEERMGELKKEYRSIEEFLNSDVPPPPPKIKPMCKKCAYFEYCFI
>NC_008346.1|WP_011641198.1|2060376_2062761_-|CRISPR-associated-helicase/endonuclease-Cas3
MLKVSLVSPHQLQDTRYLAHSRTLNGHRQTETLLAHSQLTLYYFEKYCSIKDIDKIIKKLIEACGFQGEEADKVYLAFVYAIYLHDYGKINPRYQYDVLENKVFYAMREQAINSNHALASAYLYLDHMYRLWPGRPTPALAKCLANFAYCISKHHGNLGNGHDFSELEHVAEKYCISDIDQSVFEHTQFYMQQQKLIKQPIAFYILCRLLYTLIVGCDYCATQEFMTGCAMHPAIIGAGGRELAQSYNESAICRSIRQYQYNPSDFDGDPINELRNELFLEAERNLIANPDAHIYYLEAPTGAGKTNMAINLALRVLQTNSNISNIFYVFPFNTLVEQTKSTLLPLFGDKLAVINSITPVVVGGDDRVEDYSVAWLDHLFNNYPIVLTSHVNFFNALFSCGRNQGFPLLKLCNSVIVIDEIQSYKNAIWREIISFLQKYAKLLNMKIIIMSATLPQLDKLLKTADAKFATLIEKPEKYYHHPLFRDRVRLDFSLLAEEKITLDRLKKEVLCFKDKRVLVEFIKKKTAREFYMICKDECNAVLLTGDDNAIRREEIIKRIRNGEQLVLIATQVIEAGIDIDMEIGFKDISLLDAEEQFLGRVNRSCLNQGGALVYFFDYDDASLIYRGDARLYYSIRDPAIQQLLNEKRFAEFYATVFKDLITRTSRSNEKNIANLDKHCTQFNCKEIEAHMRLIEPNLQLFVPYVWGDLDGYQVWEEFKALGSNKALSYAQLMVEYSRMAPKISYFTYQVFRNNTPAGAEEYGGYFFIDGGERFIEEGVLNREELEKYCRGIFL
>NC_008346.1|WP_011641199.1|2062820_2063561_-|type-I-B-CRISPR-associated-protein-Cas5
MKSLRFTLSGPLACFRQPDVNAKVYFTYNNIHKVALLGLLGAVIGLSGYRNADLYGQGEKLYPEFYEVLSPLLVSVVPNVKNGYFSKKIQYFNNSVGYASKEEGGNLQVREQWLENPNWTVFLAQHKLDASIWDKLCDYMLRGQCVYIPYLGRNDFPAQISDVCLVELSVSKSLRIDSLFLYSGDLNTLDGGDPSQYLFVETAPTSLVPKHNFYEFGRYIFTNCTLPEDELPPYLYSDGVRQYSFY
>NC_008346.1|WP_041427509.1|2063573_2064557_-|type-I-CRISPR-associated-protein-Cas7
MTKMIKNNRVYGIIGVGAYMANFNADLSGYPKTTTNNDIFGSDKALKYPMKRMWLIEGDKVFYIKSMTIAKSKKDKEMEILQPKDLIERYEDLFGKEWDANLTVKDVAKDLFSTVDIMNFGATFTGSESESKTAKKKIGHNISITGAVQINQGFNLYEKTNVLVQDILSPFRNPNDKSEDKTATSIGTKIVTDEAHYVYSFSVNPANYADYLGLIDGFEGYTTEAYEKFKRAARVATTAFNTNSKSGCENELALFIELKEDSKLFLANLDRYVEVRKKEKQTLYDLSKLAEIIAPQQEEIQSIELFHNPISVEVNYGSLPCTVNSIF
>NC_008346.1|WP_011641201.1|2064531_2066295_-|hypothetical-protein
MLKDLLNEFVNHPDFDVDTMVLDNYQLEPGLYIRFNNYNKMDELYVKKNTDLPENDPLVKWFKKADFYSSLIEMNKPVDPKKKIHSNNLFTLFCKRDIFYQEGKVHPELQEHIDRYFSALLNPGNRETAKILAAAHYEPLPEESVYCSKARFNAVLDTVAEYIKKEDIRNNCYIKLFLNAEEEAYVYESGRYLLPKIFNKNTYNINVGGRILGLSNTDMGMNAKKPFLEHKTTAFKVPYRISTEEALLLRKFYLWLFGQGRGGRPLYNGYIPVWEHAPQLLLVANEVDVRKPVIYLHFERGVDLTIDDCEFLPSFSDKMSKAIVFTNYFDNCLDKSSYKSGVLDKLSAVEAHINENLYAFQLVSNYDVKNIKVTEKLSQALANQIMLSREAMRAWLRKGYFLPMQSGVDKITMGVILARLQKLEFIPALAYALNVRFSLMKYFREEEKDMGLTIQTAYLNLREKVLNTKDTASCENDLEFYLAVGQLLRYFFSLSQAQTLHYDVLWRGITAARDAGDIKTEYRKYFQRYAHEININNPRFNNMLSIASSYLPKKEEPINLDALFYGFAADKIIYYKDKEDDKNDKEQ
>NC_008346.1|WP_011641202.1|2066299_2066992_-|CRISPR-associated-endoribonuclease-Cas6
MNLCFHELLFTLQFNQDIPVRQVQSSLAALIANGMTFSEPLKELHQQNIFKPYVFSMPYPLEPDRIYRRGRMYCFNLRTQKLDFALAMKNYLPQAQGNARVVATELRTFSQPHISELISLTPIIVTVDNLCWMPENGIGLLANRLHNNAVKKCKAINAEFIEPEEMFFELVEILNRKPIGVSYKGTTLLGHKVQLKIRPKPWAQQLAVTVLAQGLAEKNSIGFGYCIARR
>NC_008346.1|WP_011641203.1|2067762_2069076_+|hypothetical-protein
MERKTQEISINIHMHSQMAPVILAAIENYARVCGMDKPDILKLVLAVEEIFTYLSDTSLPGEMMLLQCRYFTYCLQVDFIFPLRSLNLRAFNLTTEVRADNEPLMEEMGLLIASRSVEKLYFSRIHPDKLCLSMVKEKTYPEMIKQPLADLAPALQTIIRPAEPEEIKEFCQNLLQRIAASQYPSFFNYPGKVIDMLAGDEYSILLAFDEKDHVVGGICWTGSQDRTVECFGPYVFNDIEATALALMEECLVHIGRSSVPGIISRYADNALLASYFEKLGSTSIYKAGERTSRKNAYYRQINEDSGSRVWAHPDIEGFLQEFYQRLFLPREIRLVLNQGEQQNQESVFTTEFDRGREQVTIRPLVFGEDAEHNLTQHINSLQKEKLFNIFLEVDLGKAWQVSLTPYLLSSGFKPCLLLPYAGDGDLLIFQFEAGDAL
>NC_008346.1|WP_011641204.1|2069072_2070200_+|histidinol-phosphate-transaminase
MNLPKLDRLVPSYIKGFEAYIPSKPDPELKKLFGCKQLYRLNNNENPLGPPPAAQEMLHRFETHRAAIYPSGDSYYLRDKLAEKYKLHPDQILVGNGANEVITFAIKAFCEAGDNIITADKTFAVYEWVAIFSGYEARLVPLKDFCFDDEGMLAQIDERTKILFICNPNNPTGTYWNQEKLCRFLDRIDGKQIVVVDEAYCEFVEKEDFPDGIALIERYPNLVVFRTFSKMYGLAGLRIGYLAGSLEVVNIMRRACVVYSVNTLAQETALLALDDPEHIQKTNTLVKKEKAYLYRELTRLGLPLVMHEGNFVMIKLPISDTLAYRKLMARGVMVRSMTGFRYPNYIRITIAQHEAMEALIESLRAIFKASEETAK

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Crispr_ID: NC_008346_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008346_9

2856131-2868370

TypeIII

Consensus_repeat	Method
GTTTCAATCCCCTATACGCGGGTCACAAAC	CRISPRCasFinder
GTTTCAATCCCCTATACGCGGGTCACAAAC	CRT
GTTTCAATCCCCTATACGCGGGTCACAAAC	PILER-CR
GTTTCAATCCCCTATACGCGGGTCACAAAC	PILER-CR

185 spacers

cas6,cas2,cas1,cas4,cas3,cas5,cas7,cas8b1

The CRISPR arrays of NC_008346_9

>merge|NC_008346|9|2856131-2868370|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTTTCAATCCCCTATACGCGGGTCACAAACGCGGCATAATTTTGCTACCGTCCTGCTTGATCTGGGTTTCAATCCCCTATACGCGGGTCACAAACCTTTGAGGCTGAGCTTCCCACTGCTGAGCAAACCGGGTTTCAATCCCCTATACGCGGGTCACAAACGAGTATAAGCTTCCAGCGGTGAGCATCGTCAATTACGTTTCAATCCCCTATACGCGGGTCACAAACTATGTTGAGGTTGGCAAAGAGTACCTTGCGGAATTTAGTTTCAATCCCCTATACGCGGGTCACAAACCCCAAAAGGCTATCGGTGTTGATTGAAGCTTTGGCGTTTCAATCCCCTATACGCGGGTCACAAACGTGATTAACTAATGCCAGAACAGACAAGACAAGCAAGTTTCAATCCCCTATACGCGGGTCACAAACCCATAGTAATTAGCGGCACCCCTAGCCACGATGCAGGTTTCAATCCCCTATACGCGGGTCACAAACGCCAAATGGGTGAACGGCTGGGGATATCACATAGAGCTGTTTCAATCCCCTATACGCGGGTCACAAACGGGTTTCCTTGTATCCACCACAACGTTGTTTTTTGTAGTTTCAATCCCCTATACGCGGGTCACAAACGATACCCGTAAACCCGTAAACATACGGATTTATCGGTTTCAATCCCCTATACGCGGGTCACAAACAAAGTTTTAATGCTTATCTTAACTGCATCAAATCCAAGTTTCAATCCCCTATACGCGGGTCACAAACGGAAGGAAGCCCAAGCCAAAACAACAGTCTAGCCAGGTTTCAATCCCCTATACGCGGGTCACAAACTACAACACTATTTTTATGGTATCTTCCCCATCTATCGTTTCAATCCCCTATACGCGGGTCACAAACGCAAACTGTGCGATTGCTTGTTCCTCTTTTTCGCCGTTTCAATCCCCTATACGCGGGTCACAAACAAATGTTAGTTAAAACTATAACAGACGAAACAAATGGGTTTCAATCCCCTATACGCGGGTCACAAACTACCGCCCCTAGTTTACAATTTCCAACCCGTTTATAGTTTCAATCCCCTATACGCGGGTCACAAACTGGATAAAGGGCCTTGTCAGTATTGGAGGGGAGATGACGTTTCAATCCCCTATACGCGGGTCACAAACGAGGGGTAAGCGTGACACTAGAACAAGCACTAGAGAGTTTCAATCCCCTATACGCGGGTCACAAACAAAGGAGGGGTGGAAAATCCTAAGCATCAGAGAGATGTTTCAATCCCCTATACGCGGGTCACAAACACCGGGTTTCCCCGGTTTCGCTGTCTACAGCTCGTGTTTCAATCCCCTATACGCGGGTCACAAACCCACCTAATCACCATTTCTACACTCAAATTCCTTTAGTTTCAATCCCCTATACGCGGGTCACAAACTCTAGTATGAGAAGAAATATGAATAATTGTAGTTTTGTTTCAATCCCCTATACGCGGGTCACAAACATATAGGCAATAGCAAGCATTAAAACAATACGATAGTTTCAATCCCCTATACGCGGGTCACAAACCAAGTAATAAAGAGATTATTAATTTCATGGAAAAAAGTTTCAATCCCCTATACGCGGGTCACAAACGTTTTTTGAGTATTTTGAGATTGAACCCCAGGTTATGTTTCAATCCCCTATACGCGGGTCACAAACTCAATATAAGTATATACTATCGTTTGATATATCATAGTTTCAATCCCCTATACGCGGGTCACAAACTGTAATCTTATTACTATAATTATTAAATATTCTTTGTTTCAATCCCCTATACGCGGGTCACAAACCCGATACCTCCCGGGGAGACCGGGCCACCGTGCTCGGGTTTCAATCCCCTATACGCGGGTCACAAACCCTTTTGATGGATACCGGGAAATTATAACCGCACTAAGTTTCAATCCCCTATACGCGGGTCACAAACTATGCGGCTATCGTCACCACTCCTGCCGGATACCTGTTTCAATCCCCTATACGCGGGTCACAAACTGTCGAATATATTATGTAATAATATATTACATAGTAGTTTCAATCCCCTATACGCGGGTCACAAACTGTGACTGGTGCGGCAATTGGATTTGCAATGATTGGTTTCAATCCCCTATACGCGGGTCACAAACCACCTGCGATGATTGTGGGTGCTACATTGATTCGGAGTTTCAATCCCCTATACGCGGGTCACAAACAGCACGGTTCAGCGTGCAATGGAAATTGCTTACGAAGTTTCAATCCCCTATACGCGGGTCACAAACTAAAATAAAAAAATAAATTTTATAAAAAAGAAGGGTTTCAATCCCCTATACGCGGGTCACAAACCGGTCAGACAAGCCCCCGAAGTCCCAAAAAATTCTGGGTTTCAATCCCCTATACGCGGGTCACAAACGACACAAAAAGGTGTCGAGGCGAAAGGAGTCGATGGGTTTCAATCCCCTATACGCGGGTCACAAACAAGAATTTTAGGGGGGGATAGAGATGAAAGAAAAGGGTTTCAATCCCCTATACGCGGGTCACAAACCCCTATCGGCGGCCCTTCGGCGGCCCCCCTCTTGGACGTTTCAATCCCCTATACGCGGGTCACAAACCCTCAGTCACCGGGGGGCGCAGGAAAGCGGTATCCCGGTTTCAATCCCCTATACGCGGGTCACAAACTTTTTACATCGCCATAAATAATGGTGGTGTAGCCCAGTTTCAATCCCCTATACGCGGGTCACAAACACAGGAGAAGGAGAATGTTTGCCCTATTGACTATGTTTCAATCCCCTATACGCGGGTCACAAACTCCCATACATCCCCATTTTTTGACATCCTTCGACAAGTTTCAATCCCCTATACGCGGGTCACAAACTGAATAATTGCAATGGCAATTGTTCAGAATGTTTTGTTTCAATCCCCTATACGCGGGTCACAAACCTTGGGACGATACTCCAAAGTTTGCTCCTAATCCAGTTTCAATCCCCTATACGCGGGTCACAAACATGGCGGGATTTTAAGGCCTTCGCAGGTTGGACGAAGTTTCAATCCCCTATACGCGGGTCACAAACCCCATTGTATCCCCGTGTTATCACTTTTACCCTGTGTTTCAATCCCCTATACGCGGGTCACAAACAATCTAATTTTCATGCTACCACCTCCCTTAGATGAGAGTTTCAATCCCCTATACGCGGGTCACAAACGAAAATAAAGATGGTCAAACCATACATTTTGATTCATGTTTCAATCCCCTATACGCGGGTCACAAACAAAGAAGAAGATAAAAATACTATTAAATTAAGTGAGTTTCAATCCCCTATACGCGGGTCACAAACGTTGTTAGCCTGTTTTTCATCCATATGGGATTTAACAGTTTCAATCCCCTATACGCGGGTCACAAACTTTGATGATAGCGGTTTATACTTACTGGTGTGCCTAGAGTTTCAATCCCCTATACGCGGGTCACAAACTGAGGTTGCAAGAGGGTATCCGCATGGGTTTTGATGAGTTTCAATCCCCTATACGCGGGTCACAAACATAAAAACCTACAGTCCTATAGACTTGATAAAAACGTTTCAATCCCCTATACGCGGGTCACAAACTATCATTATTTAAACAGCAACGCAAGTTTTTTCCAAGTTTCAATCCCCTATACGCGGGTCACAAACTGAAATGATGGTCCAGCGGGCCATAGTAACGTACAGAAGTTTCAATCCCCTATACGCGGGTCACAAACATCACTAAATTCGGGTAGCTTCATACCCTTGGGGATAGTTTCAATCCCCTATACGCGGGTCACAAACTGTGGGGTATAGCCCCTCATACCCGGTATCTACCATGTTTCAATCCCCTATACGCGGGTCACAAACCAAAACCTGGGCTTCGGTTTCATCGAACCAGCATTGTTTCAATCCCCTATACGCGGGTCACAAACATAGATGAAGAAGGAATGAAAGAAGTATACAAATGGTGTTTCAATCCCCTATACGCGGGTCACAAACTGGATATGGGCACCGGAAGGTGCAGGACTGGCATTGAGTTTCAATCCCCTATACGCGGGTCACAAACAAAAATTAGAGAAAGGGGTAAAGCTTAATGCCTTTATGTTTCAATCCCCTATACGCGGGTCACAAACCTTAATTGTGAGTTTCCAGCCCCACACTTAAGGAAAGTTTCAATCCCCTATACGCGGGTCACAAACCTTAAACAGATTACAGGGCTCAAAGAGGCATTCGCGTTTCAATCCCCTATACGCGGGTCACAAACGAAATGCCTGAAATGTGGGCATGAGTACAAGATAGATGTTTCAATCCCCTATACGCGGGTCACAAACGCCACGACAGAGCCAGCTACCACTTGCCTTTTTGGGTTTCAATCCCCTATACGCGGGTCACAAACTAGGGATGATTTTTCTAAATTCTTCCCGATTGACTTGTTTCAATCCCCTATACGCGGGTCACAAACGCGCGTGTGCTCCGCGCTTTGCCTCTGCCGCTCCTTGTTTCAATCCCCTATACGCGGGTCACAAACACCTCAGTTCAATCTAATCAGCCTTGCCTGTACATGTTTCAATCCCCTATACGCGGGTCACAAACCTTGACCGTTACGAAGTGATAAAAAGCCTACAGAAGTTTCAATCCCCTATACGCGGGTCACAAACGGATCTCAATCAACCGCCAAGGCAGCAAGGATGTTGGGTTTCAATCCCCTATACGCGGGTCACAAACGCTTATACCTCTCTTCGTTGTGAAGCGAATTGCCAGTTTCAATCCCCTATACGCGGGTCACAAACCACTGCCGCATAAGTCCCACGGTTCAGATATGACAGGTTTCAATCCCCTATACGCGGGTCACAAACAGTAATTATCGAAACTCTTAATATAAACAACAATGGTTTCAATCCCCTATACGCGGGTCACAAACAGGGAGAACATACCGGATTGAGACGGCAGGAGACAGGTTTCAATCCCCTATACGCGGGTCACAAACATTGCGGGAATCGCTGGATTGAAACCTTGGAAATCTGTTTCAATCCCCTATACGCGGGTCACAAACTTTGCCACTGAATTTCTTGAGCGGGTGGTGGAAAAGGTTTCAATCCCCTATACGCGGGTCACAAACGGAAAAACTGGTTTGAACTACCACTAGGCTAAAGCCAGTTTCAATCCCCTATACGCGGGTCACAAACCCGATTCTTGGATGATGCCTGCCACGGTTATACCGTGTTTCAATCCCCTATACGCGGGTCACAAACGCCCGATACTTACGGTTTACGGGTATGCAGTTTTTGTTTCAATCCCCTATACGCGGGTCACAAACTTGATGATGAACCGATATGGATTACGTTGAATCCGTTTCAATCCCCTATACGCGGGTCACAAACTTAAATTCCTGCTTATAAGGGCCCTTGCAGGTACGCGTTTCAATCCCCTATACGCGGGTCACAAACCAGCGCCCACCAGCAGGGCCTGGTGTCGGACACCAGGGTTTCAATCCCCTATACGCGGGTCACAAACTACAGCACTTTGACCCCGCTAAATTCATTGGAGTAGGTTTCAATCCCCTATACGCGGGTCACAAACTCGAGGATCTGAGGTCCTCGAAAATTGTGTACTTTTTGTTTCAATCCCCTATACGCGGGTCACAAACCCTGTTCCCTTGAGTGCGAGGCTGAGGACCTCGCTGTTTCAATCCCCTATACGCGGGTCACAAACGGATGCGAGGCCGCTAGGCCTCTAAACGATTTCTTTGTTTCAATCCCCTATACGCGGGTCACAAACCTTACCTTGATGGTGCAGACCGGGAACATTTTTGCAGTTTCAATCCCCTATACGCGGGTCACAAACTCACTGCCCCGGTTCCAGCCCGGAGCAGGGTAAGAGGTTTCAATCCCCTATACGCGGGTCACAAACAAATCGATTGAAACAAGATACCCGGATGACAGGAGGAGTTTCAATCCCCTATACGCGGGTCACAAACCCGGGCTAGACCCGGAAAGGAGGAATTTAAAATGAGGTTTCAATCCCCTATACGCGGGTCACAAACGAGTTTCGTTTTATCATGTTTCCCGATGTTCCGGGAGAGTTTCAATCCCCTATACGCGGGTCACAAACATTGGCCATGTTTATCACTCCTTTGCAAGTTTAGTAGTTTCAATCCCCTATACGCGGGTCACAAACCTGTGCCTATTTACTATCCTTTTTCTACATTTTCGAGTTTCAATCCCCTATACGCGGGTCACAAACGCAAGTTTAGTATAGCAGGAGATATATACTTCATGGTTTCAATCCCCTATACGCGGGTCACAAACCGATACCTCCCGGGGAGACCGGGCCACCGTGCTCGGGGTTTCAATCCCCTATACGCGGGTCACAAACCAGAGCGGTAACTCCCGCAACCCGACCCAGTTCTTTGTTTCAATCCCCTATACGCGGGTCACAAACTACCACTTACCTTTTTGGTTTAGCCGACAGGGAGAAGTTTCAATCCCCTATACGCGGGTCACAAACCCCCCTACGGTTTTGCCCCGCCCTACCACAGCCGGGGTTTCAATCCCCTATACGCGGGTCACAAACCGTAACCGGCTGGGAGGGCCGGGAGTAGCCGAGGATGGTTTCAATCCCCTATACGCGGGTCACAAACGCGAAAACCGTAGCTACCGTTGGCATTGCCATTGTCGGTTTCAATCCCCTATACGCGGGTCACAAACAATAAAATAGCCGCCCTATATTCCCAATCGCTTGGGTTTCAATCCCCTATACGCGGGTCACAAACGGCAAAAACCTACCGACATAATGAGTGCCGGAATAGGTTTCAATCCCCTATACGCGGGTCACAAACTACCGGTGTCCAGCCGGAAGGCAGCATCGGTGCGTGTTTCAATCCCCTATACGCGGGTCACAAACAGTTGAACAGGTAGAGGTGTATGTAAATGATACCTGTTTCAATCCCCTATACGCGGGTCACAAACCAGTATCAAGCTCCTCGGTCTTATCCTCGTTTTTGTTGTTTCAATCCCCTATACGCGGGTCACAAACCCTAGATGCCGGTCCAGGGCGGACCCCCAGTGCTCAGTTTCAATCCCCTATACGCGGGTCACAAACTTGTGCGCCGCATACTTCGACACCCAAATACCGGTGTTTCAATCCCCTATACGCGGGTCACAAACCATGTGCGAATCGCCTGTTGTTGGTGAGGTTGTGAGTTTCAATCCCCTATACGCGGGTCACAAACGCTAAACAGTGGGCAAACGCAAAGGACACAAAGGGGTTTCAATCCCCTATACGCGGGTCACAAACGTTATTGCTTTTTCCTTCATGTTTCATCCTCCCATGTTTCAATCCCCTATACGCGGGTCACAAACCCAGGTCCCCCTCTACTACCCGCCCCAGCACTTCGGCGTTTCAATCCCCTATACGCGGGTCACAAACCACGATTTTAGTGCGGCAAATAGCGCAGCACAGGGGTTTCAATCCCCTATACGCGGGTCACAAACCGCAGGTGATGATCCGTGAATATAATGGTCTGCGGGGTTTCAATCCCCTATACGCGGGTCACAAACCGCACATCTGCTGGCGGGTCAGGTTATCGTGGAGATTGTTTCAATCCCCTATACGCGGGTCACAAACCTTTAATGTCCGATATATCGCGGTTTTACAATTTAGTTTCAATCCCCTATACGCGGGTCACAAACTAGTCGGCCACATTAGGTGGTCGCGAATTCGAAATGTTTCAATCCCCTATACGCGGGTCACAAACTACGGACCAGTGACGGATATGCTGGTCTGGGATTAGTTTCAATCCCCTATACGCGGGTCACAAACGGAGAAAGAAGGGGTTGGGTATTGCCCCTATACTCAGTTTCAATCCCCTATACGCGGGTCACAAACCGGAGAAGAAGTTGAATGCGGTTGTTTTGCTGACGAGTTTCAATCCCCTATACGCGGGTCACAAACGCCCAGAATTGGTGTACTATGCGCCGATAGACAATAGTTTCAATCCCCTATACGCGGGTCACAAACGCGGCGTGGTCGTTTGGGTGGTAGGGGACGCAACTATGTTTCAATCCCCTATACGCGGGTCACAAACTTGGCTGAGAAATTTCCAGCCAAACGGGGATGAAAAGTTTCAATCCCCTATACGCGGGTCACAAACGCTATTAGGGTGCATGGGCTTACCGTTCCATTGCGGTTTCAATCCCCTATACGCGGGTCACAAACCCGGTGGAGGCGGGTCGATCTATAAGTCAGCTGATAGTTTCAATCCCCTATACGCGGGTCACAAACATACCGACTTTTTTACTTATCGGCATCAACTTTTATAGTTTCAATCCCCTATACGCGGGTCACAAACTTGTTCCCGCTCCAATAATACCAACCTCCCCCTGCAGTTTCAATCCCCTATACGCGGGTCACAAACTAGTAGGGGAATAAATGTTATATACCTTTTCAATGGTTTCAATCCCCTATACGCGGGTCACAAACTTTATCACCTCACTTAATAACCCGTCTAATACTTTGTTTCAATCCCCTATACGCGGGTCACAAACGGCACTGCTACAAGCAGGCCAATGTCAACTCGTTGGTTTCAATCCCCTATACGCGGGTCACAAACCTTGCGAGTAGCGCAAAAGACCTGGCCGGATGAGATGTTTCAATCCCCTATACGCGGGTCACAAACAAAAGCAAATAGCCAAAACATAAAGCTTATGCTCTGGTTTCAATCCCCTATACGCGGGTCACAAACAATGAAATTTTTCTGCCAGTCGGACTGCTCAATTTTGAGTTTCAATCCCCTATACGCGGGTCACAAACTGAAACAGTGTGCTTTTGCCTATCCCCTGGGGTCCAAGTTTCAATCCCCTATACGCGGGTCACAAACTAAATTCACCGTCCGCGGCCGTGCTGGCCCAGTACATGTTTCAATCCCCTATACGCGGGTCACAAACGAGAGAGGAAAGGTTTTTCCATGGTACGGTTTTAGGGTTTCAATCCCCTATACGCGGGTCACAAACGATAAGGTTAAGCCCACTCATATTTACGATTTCCTGTTTCAATCCCCTATACGCGGGTCACAAACTGTATAGTGGGCTCCATACTCTGACCGGTAACCTCGTTTCAATCCCCTATACGCGGGTCACAAACAGGGTTTCGAACCCACGACTTCTACCGTGTGAATTATAGTTTCAATCCCCTATACGCGGGTCACAAACAAAAACAGAAAGGGGTGACATAATGCCAAACTATGGTTTCAATCCCCTATACGCGGGTCACAAACCCGAAGTTGAATTCTATATTCCTACGCGCTGGGATAGTTTCAATCCCCTATACGCGGGTCACAAACCGTACTTTTACCGCCGACCCGCTATATTCCAATGACAGTTTCAATCCCCTATACGCGGGTCACAAACGCGCATCGGCGACAGAAACCTTCGCCCCCGTCATGTTTCAATCCCCTATACGCGGGTCACAAACTCCTAAAGTCATTTACCGGGAAACTTCGCCAGCAGAGTTTCAATCCCCTATACGCGGGTCACAAACGCAAAGTCTTTGTTTGCCAGTATGTCGGCGGCAGGCAGTTTCAATCCCCTATACGCGGGTCACAAACAAATAATGCAGTAAAAAGACCAGGCCTGGCTACTATGTTTCAATCCCCTATACGCGGGTCACAAACTGCTCCGGGCGATAATACCGGGGCAGTGATAGGGGGTTTCAATCCCCTATACGCGGGTCACAAACAAGGGGAAACCTTGCAACGTGACCATGCACTTCCTCTGTTTCAATCCCCTATACGCGGGTCACAAACGGGCAAGTATTAAACAATGTTACCGGAAACCAGGTGGGTTTCAATCCCCTATACGCGGGTCACAAACAAAAAGCCGGGGGCAATTCCCCGGCTTCAACTACTGTTTCAATCCCCTATACGCGGGTCACAAACTGTTTTCGCTGTCTAAATTGTCCAGGTCGTCATAGTTTCAATCCCCTATACGCGGGTCACAAACGCAGCATATCTTCAAATATTGGGTTGACCATTACGAGTTTCAATCCCCTATACGCGGGTCACAAACTAAACATATCCCGGAAAAGGCTATGCACGCAGGCCAGGTTTCAATCCCCTATACGCGGGTCACAAACCCTGTTCCGGCGGCTCCTTCTGAAACTCCCTCGGAGTTTCAATCCCCTATACGCGGGTCACAAACCCCCGTGCCTTCAAGCTGCAGAAGCTATCATCGCCTAGTTTCAATCCCCTATACGCGGGTCACAAACACAGAAAGCCCACGTCTTTAGGCGTGGGAGTATGTGTTTCAATCCCCTATACGCGGGTCACAAACGGTCAAAACAACCTCGTCCCCGACCTTAAGCCCCTGTTTCAATCCCCTATACGCGGGTCACAAACTCCGAGCCACTCCACTGGGACCATTCGTGCCACAGGTTTCAATCCCCTATACGCGGGTCACAAACACATCAACTGCCACAACTGCCTTTTGGCTACTTGAGTTTCAATCCCCTATACGCGGGTCACAAACGAAAACGGGTATAGCATGCTTGATGGAAAACAACGGTTTCAATCCCCTATACGCGGGTCACAAACTTGCCGGGACAAAATCAGCTACAATCAATGACGATTAGTTTCAATCCCCTATACGCGGGTCACAAACATTTCTACAGGCAATATATTCGGGTACTCTTACCCAGTTTCAATCCCCTATACGCGGGTCACAAACTTTGATTGGCATTTTATTACCTTCTTTCATTTTTATATGTTTCAATCCCCTATACGCGGGTCACAAACGAAACGGTTATTTGGTTTCTATTTTAAATATTTATCCTAGTTTCAATCCCCTATACGCGGGTCACAAACAATCATCAGTTCCAAAGTCACGAGAACATATTTTATGTTTCAATCCCCTATACGCGGGTCACAAACGCATGGTCGGGGTGATGTTGCTGGGCTAGTTCCCGGGTTTCAATCCCCTATACGCGGGTCACAAACTATAGTTCTGTTATTTTGTTACCTGGAAGGTATTTGTTTCAATCCCCTATACGCGGGTCACAAACCAGGAAGAAAGAGGATATCACGCAATATTGGAACGGTTTCAATCCCCTATACGCGGGTCACAAACTAATTTTTTCTTTTAATTCTTGTCGATCTCTCACATGTTTCAATCCCCTATACGCGGGTCACAAACAAAGGGGAACTATTTCAATCAATCCAAGAGGCATTAGTTTCAATCCCCTATACGCGGGTCACAAACCTTAACTGTGATTCTGTTATAGTTCCCTGGATAAAGTTTCAATCCCCTATACGCGGGTCACAAACTTTTTTTACCTTGCTTGACTGTTTTTAAATTGCATAGTTTCAATCCCCTATACGCGGGTCACAAACTTCCCTTTCTACTTCCTTTGTGTTCATTTCACATTTGTTTCAATCCCCTATACGCGGGTCACAAACTATAGTCTATAGTGTAACCTGCGGCCTTAATCCGGGGTTTCAATCCCCTATACGCGGGTCACAAACTGTAATTCCTTTTATCTTGCGCTGTTATTCTATCAGGTTTCAATCCCCTATACGCGGGTCACAAACATGATAGTACCATGCGCATTTTTTGCCGGAGAATTGTTTCAATCCCCTATACGCGGGTCACAAACAGATAGGAGGCCAAACAATGACAGATAAACAATATAAGTTTCAATCCCCTATACGCGGGTCACAAACTTTGACAATGCGGTGCAACGTGGTTTTGTTTGGGAGTTTCAATCCCCTATACGCGGGTCACAAACAAAATAATTAAGGAGTGGTAAACAATGGCGAGAAAAGTTTCAATCCCCTATACGCGGGTCACAAACGTAAATGACCGCTTAGAGGAAACTAAGGATTTTATCGAGTTTCAATCCCCTATACGCGGGTCACAAACGTGGTACATTCAGAAAAGTACACTGGAACAACAATATGTTTCAATCCCCTATACGCGGGTCACAAACGTATTAATGGAGACACAGACGCATGTGAGGATTTACGTTTCAATCCCCTATACGCGGGTCACAAACGCATCAGGAAGGTATTTTCTTGCACTTTTGACGGTAGTTTCAATCCCCTATACGCGGGTCACAAACGTAAAATGCCGTAATATTGGGATTTATGACAATTAAAGTTTCAATCCCCTATACGCGGGTCACAAACGCAGGCGATGGCGATGTTACAACAGGTAATGCAAGGAGTTTCAATCCCCTATACGCGGGTCACAAAC

>NC_008346|9|9|2856131-2868370|CRISPRCasFinder
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGGCATAATTTTGCTACCGTCCTGCTTGATCTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTTGAGGCTGAGCTTCCCACTGCTGAGCAAACCGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGTATAAGCTTCCAGCGGTGAGCATCGTCAATTAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATGTTGAGGTTGGCAAAGAGTACCTTGCGGAATTTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCAAAAGGCTATCGGTGTTGATTGAAGCTTTGGC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTGATTAACTAATGCCAGAACAGACAAGACAAGCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCATAGTAATTAGCGGCACCCCTAGCCACGATGCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCAAATGGGTGAACGGCTGGGGATATCACATAGAGCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGGTTTCCTTGTATCCACCACAACGTTGTTTTTTGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GATACCCGTAAACCCGTAAACATACGGATTTATCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGTTTTAATGCTTATCTTAACTGCATCAAATCCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGAAGGAAGCCCAAGCCAAAACAACAGTCTAGCCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACAACACTATTTTTATGGTATCTTCCCCATCTATC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAAACTGTGCGATTGCTTGTTCCTCTTTTTCGCC
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAATGTTAGTTAAAACTATAACAGACGAAACAAATGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACCGCCCCTAGTTTACAATTTCCAACCCGTTTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGGATAAAGGGCCTTGTCAGTATTGGAGGGGAGATGAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGGGGTAAGCGTGACACTAGAACAAGCACTAGAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGGAGGGGTGGAAAATCCTAAGCATCAGAGAGAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACCGGGTTTCCCCGGTTTCGCTGTCTACAGCTCGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCACCTAATCACCATTTCTACACTCAAATTCCTTTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCTAGTATGAGAAGAAATATGAATAATTGTAGTTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATATAGGCAATAGCAAGCATTAAAACAATACGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAAGTAATAAAGAGATTATTAATTTCATGGAAAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTTTTTTGAGTATTTTGAGATTGAACCCCAGGTTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCAATATAAGTATATACTATCGTTTGATATATCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTAATCTTATTACTATAATTATTAAATATTCTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGATACCTCCCGGGGAGACCGGGCCACCGTGCTCGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTTTTGATGGATACCGGGAAATTATAACCGCACTAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATGCGGCTATCGTCACCACTCCTGCCGGATACCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTCGAATATATTATGTAATAATATATTACATAGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTGACTGGTGCGGCAATTGGATTTGCAATGATTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CACCTGCGATGATTGTGGGTGCTACATTGATTCGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGCACGGTTCAGCGTGCAATGGAAATTGCTTACGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAAATAAAAAAATAAATTTTATAAAAAAGAAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGGTCAGACAAGCCCCCGAAGTCCCAAAAAATTCTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GACACAAAAAGGTGTCGAGGCGAAAGGAGTCGATGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAGAATTTTAGGGGGGGATAGAGATGAAAGAAAAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCTATCGGCGGCCCTTCGGCGGCCCCCCTCTTGGAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTCAGTCACCGGGGGGCGCAGGAAAGCGGTATCCCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTTTACATCGCCATAAATAATGGTGGTGTAGCCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACAGGAGAAGGAGAATGTTTGCCCTATTGACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCCATACATCCCCATTTTTTGACATCCTTCGACAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAATAATTGCAATGGCAATTGTTCAGAATGTTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTGGGACGATACTCCAAAGTTTGCTCCTAATCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATGGCGGGATTTTAAGGCCTTCGCAGGTTGGACGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCATTGTATCCCCGTGTTATCACTTTTACCCTGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATCTAATTTTCATGCTACCACCTCCCTTAGATGAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAAATAAAGATGGTCAAACCATACATTTTGATTCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGAAGAAGATAAAAATACTATTAAATTAAGTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTTGTTAGCCTGTTTTTCATCCATATGGGATTTAACA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGATGATAGCGGTTTATACTTACTGGTGTGCCTAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAGGTTGCAAGAGGGTATCCGCATGGGTTTTGATGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATAAAAACCTACAGTCCTATAGACTTGATAAAAAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATCATTATTTAAACAGCAACGCAAGTTTTTTCCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAAATGATGGTCCAGCGGGCCATAGTAACGTACAGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATCACTAAATTCGGGTAGCTTCATACCCTTGGGGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTGGGGTATAGCCCCTCATACCCGGTATCTACCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAAAACCTGGGCTTCGGTTTCATCGAACCAGCATT
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATAGATGAAGAAGGAATGAAAGAAGTATACAAATGGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGGATATGGGCACCGGAAGGTGCAGGACTGGCATTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAATTAGAGAAAGGGGTAAAGCTTAATGCCTTTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTAATTGTGAGTTTCCAGCCCCACACTTAAGGAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTAAACAGATTACAGGGCTCAAAGAGGCATTCGC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAATGCCTGAAATGTGGGCATGAGTACAAGATAGAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCACGACAGAGCCAGCTACCACTTGCCTTTTTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAGGGATGATTTTTCTAAATTCTTCCCGATTGACTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGCGTGTGCTCCGCGCTTTGCCTCTGCCGCTCCTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACCTCAGTTCAATCTAATCAGCCTTGCCTGTACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTGACCGTTACGAAGTGATAAAAAGCCTACAGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGATCTCAATCAACCGCCAAGGCAGCAAGGATGTTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCTTATACCTCTCTTCGTTGTGAAGCGAATTGCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CACTGCCGCATAAGTCCCACGGTTCAGATATGACAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGTAATTATCGAAACTCTTAATATAAACAACAATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGGGAGAACATACCGGATTGAGACGGCAGGAGACAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATTGCGGGAATCGCTGGATTGAAACCTTGGAAATCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGCCACTGAATTTCTTGAGCGGGTGGTGGAAAAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGAAAAACTGGTTTGAACTACCACTAGGCTAAAGCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGATTCTTGGATGATGCCTGCCACGGTTATACCGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCCGATACTTACGGTTTACGGGTATGCAGTTTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGATGATGAACCGATATGGATTACGTTGAATCC
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTAAATTCCTGCTTATAAGGGCCCTTGCAGGTACGC
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGCGCCCACCAGCAGGGCCTGGTGTCGGACACCAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACAGCACTTTGACCCCGCTAAATTCATTGGAGTAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCGAGGATCTGAGGTCCTCGAAAATTGTGTACTTTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTGTTCCCTTGAGTGCGAGGCTGAGGACCTCGCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGATGCGAGGCCGCTAGGCCTCTAAACGATTTCTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTACCTTGATGGTGCAGACCGGGAACATTTTTGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCACTGCCCCGGTTCCAGCCCGGAGCAGGGTAAGAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAATCGATTGAAACAAGATACCCGGATGACAGGAGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGGGCTAGACCCGGAAAGGAGGAATTTAAAATGAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGTTTCGTTTTATCATGTTTCCCGATGTTCCGGGAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATTGGCCATGTTTATCACTCCTTTGCAAGTTTAGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTGTGCCTATTTACTATCCTTTTTCTACATTTTCGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAAGTTTAGTATAGCAGGAGATATATACTTCATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGATACCTCCCGGGGAGACCGGGCCACCGTGCTCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGAGCGGTAACTCCCGCAACCCGACCCAGTTCTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACCACTTACCTTTTTGGTTTAGCCGACAGGGAGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCCCTACGGTTTTGCCCCGCCCTACCACAGCCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGTAACCGGCTGGGAGGGCCGGGAGTAGCCGAGGATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGAAAACCGTAGCTACCGTTGGCATTGCCATTGTCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATAAAATAGCCGCCCTATATTCCCAATCGCTTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGCAAAAACCTACCGACATAATGAGTGCCGGAATAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACCGGTGTCCAGCCGGAAGGCAGCATCGGTGCGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGTTGAACAGGTAGAGGTGTATGTAAATGATACCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGTATCAAGCTCCTCGGTCTTATCCTCGTTTTTGTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTAGATGCCGGTCCAGGGCGGACCCCCAGTGCTCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGTGCGCCGCATACTTCGACACCCAAATACCGGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CATGTGCGAATCGCCTGTTGTTGGTGAGGTTGTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCTAAACAGTGGGCAAACGCAAAGGACACAAAGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTTATTGCTTTTTCCTTCATGTTTCATCCTCCCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCAGGTCCCCCTCTACTACCCGCCCCAGCACTTCGGC
GTTTCAATCCCCTATACGCGGGTCACAAAC	CACGATTTTAGTGCGGCAAATAGCGCAGCACAGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGCAGGTGATGATCCGTGAATATAATGGTCTGCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGCACATCTGCTGGCGGGTCAGGTTATCGTGGAGATT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTTAATGTCCGATATATCGCGGTTTTACAATTTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAGTCGGCCACATTAGGTGGTCGCGAATTCGAAAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACGGACCAGTGACGGATATGCTGGTCTGGGATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGAGAAAGAAGGGGTTGGGTATTGCCCCTATACTCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGGAGAAGAAGTTGAATGCGGTTGTTTTGCTGACGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCCAGAATTGGTGTACTATGCGCCGATAGACAATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGGCGTGGTCGTTTGGGTGGTAGGGGACGCAACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGGCTGAGAAATTTCCAGCCAAACGGGGATGAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCTATTAGGGTGCATGGGCTTACCGTTCCATTGCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGGTGGAGGCGGGTCGATCTATAAGTCAGCTGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATACCGACTTTTTTACTTATCGGCATCAACTTTTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGTTCCCGCTCCAATAATACCAACCTCCCCCTGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAGTAGGGGAATAAATGTTATATACCTTTTCAATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTATCACCTCACTTAATAACCCGTCTAATACTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGCACTGCTACAAGCAGGCCAATGTCAACTCGTTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTGCGAGTAGCGCAAAAGACCTGGCCGGATGAGAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAGCAAATAGCCAAAACATAAAGCTTATGCTCTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATGAAATTTTTCTGCCAGTCGGACTGCTCAATTTTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAAACAGTGTGCTTTTGCCTATCCCCTGGGGTCCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAATTCACCGTCCGCGGCCGTGCTGGCCCAGTACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGAGAGGAAAGGTTTTTCCATGGTACGGTTTTAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GATAAGGTTAAGCCCACTCATATTTACGATTTCCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTATAGTGGGCTCCATACTCTGACCGGTAACCTC
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGGGTTTCGAACCCACGACTTCTACCGTGTGAATTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAACAGAAAGGGGTGACATAATGCCAAACTATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGAAGTTGAATTCTATATTCCTACGCGCTGGGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGTACTTTTACCGCCGACCCGCTATATTCCAATGACA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGCATCGGCGACAGAAACCTTCGCCCCCGTCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCTAAAGTCATTTACCGGGAAACTTCGCCAGCAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAAAGTCTTTGTTTGCCAGTATGTCGGCGGCAGGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAATAATGCAGTAAAAAGACCAGGCCTGGCTACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGCTCCGGGCGATAATACCGGGGCAGTGATAGGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAGGGGAAACCTTGCAACGTGACCATGCACTTCCTCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGGCAAGTATTAAACAATGTTACCGGAAACCAGGTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAAGCCGGGGGCAATTCCCCGGCTTCAACTACT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTTTTCGCTGTCTAAATTGTCCAGGTCGTCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAGCATATCTTCAAATATTGGGTTGACCATTACGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAACATATCCCGGAAAAGGCTATGCACGCAGGCCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTGTTCCGGCGGCTCCTTCTGAAACTCCCTCGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCCGTGCCTTCAAGCTGCAGAAGCTATCATCGCCTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACAGAAAGCCCACGTCTTTAGGCGTGGGAGTATGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGTCAAAACAACCTCGTCCCCGACCTTAAGCCCCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCGAGCCACTCCACTGGGACCATTCGTGCCACAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACATCAACTGCCACAACTGCCTTTTGGCTACTTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAAACGGGTATAGCATGCTTGATGGAAAACAACG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGCCGGGACAAAATCAGCTACAATCAATGACGATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATTTCTACAGGCAATATATTCGGGTACTCTTACCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGATTGGCATTTTATTACCTTCTTTCATTTTTATAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAACGGTTATTTGGTTTCTATTTTAAATATTTATCCTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATCATCAGTTCCAAAGTCACGAGAACATATTTTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCATGGTCGGGGTGATGTTGCTGGGCTAGTTCCCGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATAGTTCTGTTATTTTGTTACCTGGAAGGTATTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGGAAGAAAGAGGATATCACGCAATATTGGAACG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAATTTTTTCTTTTAATTCTTGTCGATCTCTCACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGGGGAACTATTTCAATCAATCCAAGAGGCATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTAACTGTGATTCTGTTATAGTTCCCTGGATAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTTTTTACCTTGCTTGACTGTTTTTAAATTGCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTCCCTTTCTACTTCCTTTGTGTTCATTTCACATTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATAGTCTATAGTGTAACCTGCGGCCTTAATCCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTAATTCCTTTTATCTTGCGCTGTTATTCTATCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATGATAGTACCATGCGCATTTTTTGCCGGAGAATT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGATAGGAGGCCAAACAATGACAGATAAACAATATAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGACAATGCGGTGCAACGTGGTTTTGTTTGGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAATAATTAAGGAGTGGTAAACAATGGCGAGAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTAAATGACCGCTTAGAGGAAACTAAGGATTTTATCGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTGGTACATTCAGAAAAGTACACTGGAACAACAATAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTATTAATGGAGACACAGACGCATGTGAGGATTTAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCATCAGGAAGGTATTTTCTTGCACTTTTGACGGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTAAAATGCCGTAATATTGGGATTTATGACAATTAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAGGCGATGGCGATGTTACAACAGGTAATGCAAGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC

>NC_008346|9|5|2856131-2868370|CRT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGGCATAATTTTGCTACCGTCCTGCTTGATCTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTTGAGGCTGAGCTTCCCACTGCTGAGCAAACCGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGTATAAGCTTCCAGCGGTGAGCATCGTCAATTAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATGTTGAGGTTGGCAAAGAGTACCTTGCGGAATTTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCAAAAGGCTATCGGTGTTGATTGAAGCTTTGGC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTGATTAACTAATGCCAGAACAGACAAGACAAGCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCATAGTAATTAGCGGCACCCCTAGCCACGATGCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCAAATGGGTGAACGGCTGGGGATATCACATAGAGCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGGTTTCCTTGTATCCACCACAACGTTGTTTTTTGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GATACCCGTAAACCCGTAAACATACGGATTTATCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGTTTTAATGCTTATCTTAACTGCATCAAATCCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGAAGGAAGCCCAAGCCAAAACAACAGTCTAGCCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACAACACTATTTTTATGGTATCTTCCCCATCTATC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAAACTGTGCGATTGCTTGTTCCTCTTTTTCGCC
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAATGTTAGTTAAAACTATAACAGACGAAACAAATGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACCGCCCCTAGTTTACAATTTCCAACCCGTTTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGGATAAAGGGCCTTGTCAGTATTGGAGGGGAGATGAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGGGGTAAGCGTGACACTAGAACAAGCACTAGAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGGAGGGGTGGAAAATCCTAAGCATCAGAGAGAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACCGGGTTTCCCCGGTTTCGCTGTCTACAGCTCGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCACCTAATCACCATTTCTACACTCAAATTCCTTTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCTAGTATGAGAAGAAATATGAATAATTGTAGTTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATATAGGCAATAGCAAGCATTAAAACAATACGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAAGTAATAAAGAGATTATTAATTTCATGGAAAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTTTTTTGAGTATTTTGAGATTGAACCCCAGGTTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCAATATAAGTATATACTATCGTTTGATATATCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTAATCTTATTACTATAATTATTAAATATTCTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGATACCTCCCGGGGAGACCGGGCCACCGTGCTCGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTTTTGATGGATACCGGGAAATTATAACCGCACTAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATGCGGCTATCGTCACCACTCCTGCCGGATACCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTCGAATATATTATGTAATAATATATTACATAGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTGACTGGTGCGGCAATTGGATTTGCAATGATTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CACCTGCGATGATTGTGGGTGCTACATTGATTCGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGCACGGTTCAGCGTGCAATGGAAATTGCTTACGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAAATAAAAAAATAAATTTTATAAAAAAGAAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGGTCAGACAAGCCCCCGAAGTCCCAAAAAATTCTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GACACAAAAAGGTGTCGAGGCGAAAGGAGTCGATGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAGAATTTTAGGGGGGGATAGAGATGAAAGAAAAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCTATCGGCGGCCCTTCGGCGGCCCCCCTCTTGGAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTCAGTCACCGGGGGGCGCAGGAAAGCGGTATCCCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTTTACATCGCCATAAATAATGGTGGTGTAGCCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACAGGAGAAGGAGAATGTTTGCCCTATTGACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCCATACATCCCCATTTTTTGACATCCTTCGACAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAATAATTGCAATGGCAATTGTTCAGAATGTTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTGGGACGATACTCCAAAGTTTGCTCCTAATCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATGGCGGGATTTTAAGGCCTTCGCAGGTTGGACGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCATTGTATCCCCGTGTTATCACTTTTACCCTGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATCTAATTTTCATGCTACCACCTCCCTTAGATGAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAAATAAAGATGGTCAAACCATACATTTTGATTCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGAAGAAGATAAAAATACTATTAAATTAAGTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTTGTTAGCCTGTTTTTCATCCATATGGGATTTAACA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGATGATAGCGGTTTATACTTACTGGTGTGCCTAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAGGTTGCAAGAGGGTATCCGCATGGGTTTTGATGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATAAAAACCTACAGTCCTATAGACTTGATAAAAAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATCATTATTTAAACAGCAACGCAAGTTTTTTCCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAAATGATGGTCCAGCGGGCCATAGTAACGTACAGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATCACTAAATTCGGGTAGCTTCATACCCTTGGGGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTGGGGTATAGCCCCTCATACCCGGTATCTACCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAAAACCTGGGCTTCGGTTTCATCGAACCAGCATT
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATAGATGAAGAAGGAATGAAAGAAGTATACAAATGGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGGATATGGGCACCGGAAGGTGCAGGACTGGCATTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAATTAGAGAAAGGGGTAAAGCTTAATGCCTTTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTAATTGTGAGTTTCCAGCCCCACACTTAAGGAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTAAACAGATTACAGGGCTCAAAGAGGCATTCGC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAATGCCTGAAATGTGGGCATGAGTACAAGATAGAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCACGACAGAGCCAGCTACCACTTGCCTTTTTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAGGGATGATTTTTCTAAATTCTTCCCGATTGACTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGCGTGTGCTCCGCGCTTTGCCTCTGCCGCTCCTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACCTCAGTTCAATCTAATCAGCCTTGCCTGTACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTGACCGTTACGAAGTGATAAAAAGCCTACAGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGATCTCAATCAACCGCCAAGGCAGCAAGGATGTTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCTTATACCTCTCTTCGTTGTGAAGCGAATTGCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CACTGCCGCATAAGTCCCACGGTTCAGATATGACAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGTAATTATCGAAACTCTTAATATAAACAACAATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGGGAGAACATACCGGATTGAGACGGCAGGAGACAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATTGCGGGAATCGCTGGATTGAAACCTTGGAAATCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGCCACTGAATTTCTTGAGCGGGTGGTGGAAAAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGAAAAACTGGTTTGAACTACCACTAGGCTAAAGCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGATTCTTGGATGATGCCTGCCACGGTTATACCGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCCGATACTTACGGTTTACGGGTATGCAGTTTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGATGATGAACCGATATGGATTACGTTGAATCC
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTAAATTCCTGCTTATAAGGGCCCTTGCAGGTACGC
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGCGCCCACCAGCAGGGCCTGGTGTCGGACACCAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACAGCACTTTGACCCCGCTAAATTCATTGGAGTAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCGAGGATCTGAGGTCCTCGAAAATTGTGTACTTTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTGTTCCCTTGAGTGCGAGGCTGAGGACCTCGCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGATGCGAGGCCGCTAGGCCTCTAAACGATTTCTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTACCTTGATGGTGCAGACCGGGAACATTTTTGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCACTGCCCCGGTTCCAGCCCGGAGCAGGGTAAGAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAATCGATTGAAACAAGATACCCGGATGACAGGAGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGGGCTAGACCCGGAAAGGAGGAATTTAAAATGAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGTTTCGTTTTATCATGTTTCCCGATGTTCCGGGAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATTGGCCATGTTTATCACTCCTTTGCAAGTTTAGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTGTGCCTATTTACTATCCTTTTTCTACATTTTCGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAAGTTTAGTATAGCAGGAGATATATACTTCATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGATACCTCCCGGGGAGACCGGGCCACCGTGCTCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGAGCGGTAACTCCCGCAACCCGACCCAGTTCTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACCACTTACCTTTTTGGTTTAGCCGACAGGGAGAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCCCTACGGTTTTGCCCCGCCCTACCACAGCCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGTAACCGGCTGGGAGGGCCGGGAGTAGCCGAGGATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGAAAACCGTAGCTACCGTTGGCATTGCCATTGTCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATAAAATAGCCGCCCTATATTCCCAATCGCTTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGCAAAAACCTACCGACATAATGAGTGCCGGAATAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACCGGTGTCCAGCCGGAAGGCAGCATCGGTGCGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGTTGAACAGGTAGAGGTGTATGTAAATGATACCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGTATCAAGCTCCTCGGTCTTATCCTCGTTTTTGTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTAGATGCCGGTCCAGGGCGGACCCCCAGTGCTCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGTGCGCCGCATACTTCGACACCCAAATACCGGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CATGTGCGAATCGCCTGTTGTTGGTGAGGTTGTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCTAAACAGTGGGCAAACGCAAAGGACACAAAGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTTATTGCTTTTTCCTTCATGTTTCATCCTCCCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCAGGTCCCCCTCTACTACCCGCCCCAGCACTTCGGC
GTTTCAATCCCCTATACGCGGGTCACAAAC	CACGATTTTAGTGCGGCAAATAGCGCAGCACAGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGCAGGTGATGATCCGTGAATATAATGGTCTGCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGCACATCTGCTGGCGGGTCAGGTTATCGTGGAGATT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTTAATGTCCGATATATCGCGGTTTTACAATTTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAGTCGGCCACATTAGGTGGTCGCGAATTCGAAAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TACGGACCAGTGACGGATATGCTGGTCTGGGATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGAGAAAGAAGGGGTTGGGTATTGCCCCTATACTCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGGAGAAGAAGTTGAATGCGGTTGTTTTGCTGACGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCCAGAATTGGTGTACTATGCGCCGATAGACAATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGGCGTGGTCGTTTGGGTGGTAGGGGACGCAACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGGCTGAGAAATTTCCAGCCAAACGGGGATGAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCTATTAGGGTGCATGGGCTTACCGTTCCATTGCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGGTGGAGGCGGGTCGATCTATAAGTCAGCTGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATACCGACTTTTTTACTTATCGGCATCAACTTTTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGTTCCCGCTCCAATAATACCAACCTCCCCCTGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAGTAGGGGAATAAATGTTATATACCTTTTCAATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTATCACCTCACTTAATAACCCGTCTAATACTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGCACTGCTACAAGCAGGCCAATGTCAACTCGTTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTGCGAGTAGCGCAAAAGACCTGGCCGGATGAGAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAGCAAATAGCCAAAACATAAAGCTTATGCTCTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATGAAATTTTTCTGCCAGTCGGACTGCTCAATTTTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAAACAGTGTGCTTTTGCCTATCCCCTGGGGTCCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAATTCACCGTCCGCGGCCGTGCTGGCCCAGTACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGAGAGGAAAGGTTTTTCCATGGTACGGTTTTAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GATAAGGTTAAGCCCACTCATATTTACGATTTCCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTATAGTGGGCTCCATACTCTGACCGGTAACCTC
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGGGTTTCGAACCCACGACTTCTACCGTGTGAATTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAACAGAAAGGGGTGACATAATGCCAAACTATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGAAGTTGAATTCTATATTCCTACGCGCTGGGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGTACTTTTACCGCCGACCCGCTATATTCCAATGACA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGCATCGGCGACAGAAACCTTCGCCCCCGTCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCTAAAGTCATTTACCGGGAAACTTCGCCAGCAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAAAGTCTTTGTTTGCCAGTATGTCGGCGGCAGGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAATAATGCAGTAAAAAGACCAGGCCTGGCTACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGCTCCGGGCGATAATACCGGGGCAGTGATAGGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAGGGGAAACCTTGCAACGTGACCATGCACTTCCTCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGGCAAGTATTAAACAATGTTACCGGAAACCAGGTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAAGCCGGGGGCAATTCCCCGGCTTCAACTACT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTTTTCGCTGTCTAAATTGTCCAGGTCGTCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAGCATATCTTCAAATATTGGGTTGACCATTACGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAACATATCCCGGAAAAGGCTATGCACGCAGGCCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTGTTCCGGCGGCTCCTTCTGAAACTCCCTCGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCCGTGCCTTCAAGCTGCAGAAGCTATCATCGCCTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACAGAAAGCCCACGTCTTTAGGCGTGGGAGTATGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGTCAAAACAACCTCGTCCCCGACCTTAAGCCCCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCGAGCCACTCCACTGGGACCATTCGTGCCACAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACATCAACTGCCACAACTGCCTTTTGGCTACTTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAAACGGGTATAGCATGCTTGATGGAAAACAACG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGCCGGGACAAAATCAGCTACAATCAATGACGATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATTTCTACAGGCAATATATTCGGGTACTCTTACCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGATTGGCATTTTATTACCTTCTTTCATTTTTATAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAACGGTTATTTGGTTTCTATTTTAAATATTTATCCTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATCATCAGTTCCAAAGTCACGAGAACATATTTTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCATGGTCGGGGTGATGTTGCTGGGCTAGTTCCCGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATAGTTCTGTTATTTTGTTACCTGGAAGGTATTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGGAAGAAAGAGGATATCACGCAATATTGGAACG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAATTTTTTCTTTTAATTCTTGTCGATCTCTCACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGGGGAACTATTTCAATCAATCCAAGAGGCATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTAACTGTGATTCTGTTATAGTTCCCTGGATAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTTTTTACCTTGCTTGACTGTTTTTAAATTGCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTCCCTTTCTACTTCCTTTGTGTTCATTTCACATTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATAGTCTATAGTGTAACCTGCGGCCTTAATCCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTAATTCCTTTTATCTTGCGCTGTTATTCTATCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATGATAGTACCATGCGCATTTTTTGCCGGAGAATT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGATAGGAGGCCAAACAATGACAGATAAACAATATAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGACAATGCGGTGCAACGTGGTTTTGTTTGGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAATAATTAAGGAGTGGTAAACAATGGCGAGAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTAAATGACCGCTTAGAGGAAACTAAGGATTTTATCGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTGGTACATTCAGAAAAGTACACTGGAACAACAATAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTATTAATGGAGACACAGACGCATGTGAGGATTTAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCATCAGGAAGGTATTTTCTTGCACTTTTGACGGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTAAAATGCCGTAATATTGGGATTTATGACAATTAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAGGCGATGGCGATGTTACAACAGGTAATGCAAGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC

>NC_008346|9|7|2863917-2868370|PILER-CR
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGAGAAAGAAGGGGTTGGGTATTGCCCCTATACTCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGGAGAAGAAGTTGAATGCGGTTGTTTTGCTGACGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCCAGAATTGGTGTACTATGCGCCGATAGACAATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGGCGTGGTCGTTTGGGTGGTAGGGGACGCAACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGGCTGAGAAATTTCCAGCCAAACGGGGATGAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCTATTAGGGTGCATGGGCTTACCGTTCCATTGCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGGTGGAGGCGGGTCGATCTATAAGTCAGCTGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATACCGACTTTTTTACTTATCGGCATCAACTTTTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGTTCCCGCTCCAATAATACCAACCTCCCCCTGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAGTAGGGGAATAAATGTTATATACCTTTTCAATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTATCACCTCACTTAATAACCCGTCTAATACTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGCACTGCTACAAGCAGGCCAATGTCAACTCGTTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTGCGAGTAGCGCAAAAGACCTGGCCGGATGAGAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAGCAAATAGCCAAAACATAAAGCTTATGCTCTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATGAAATTTTTCTGCCAGTCGGACTGCTCAATTTTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAAACAGTGTGCTTTTGCCTATCCCCTGGGGTCCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAATTCACCGTCCGCGGCCGTGCTGGCCCAGTACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGAGAGGAAAGGTTTTTCCATGGTACGGTTTTAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GATAAGGTTAAGCCCACTCATATTTACGATTTCCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTATAGTGGGCTCCATACTCTGACCGGTAACCTC
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGGGTTTCGAACCCACGACTTCTACCGTGTGAATTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAACAGAAAGGGGTGACATAATGCCAAACTATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGAAGTTGAATTCTATATTCCTACGCGCTGGGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGTACTTTTACCGCCGACCCGCTATATTCCAATGACA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGCATCGGCGACAGAAACCTTCGCCCCCGTCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCTAAAGTCATTTACCGGGAAACTTCGCCAGCAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAAAGTCTTTGTTTGCCAGTATGTCGGCGGCAGGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAATAATGCAGTAAAAAGACCAGGCCTGGCTACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGCTCCGGGCGATAATACCGGGGCAGTGATAGGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAGGGGAAACCTTGCAACGTGACCATGCACTTCCTCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGGCAAGTATTAAACAATGTTACCGGAAACCAGGTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAAGCCGGGGGCAATTCCCCGGCTTCAACTACT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTTTTCGCTGTCTAAATTGTCCAGGTCGTCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAGCATATCTTCAAATATTGGGTTGACCATTACGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAACATATCCCGGAAAAGGCTATGCACGCAGGCCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTGTTCCGGCGGCTCCTTCTGAAACTCCCTCGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCCGTGCCTTCAAGCTGCAGAAGCTATCATCGCCTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACAGAAAGCCCACGTCTTTAGGCGTGGGAGTATGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGTCAAAACAACCTCGTCCCCGACCTTAAGCCCCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCGAGCCACTCCACTGGGACCATTCGTGCCACAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACATCAACTGCCACAACTGCCTTTTGGCTACTTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAAACGGGTATAGCATGCTTGATGGAAAACAACG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGCCGGGACAAAATCAGCTACAATCAATGACGATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATTTCTACAGGCAATATATTCGGGTACTCTTACCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGATTGGCATTTTATTACCTTCTTTCATTTTTATAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAACGGTTATTTGGTTTCTATTTTAAATATTTATCCTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATCATCAGTTCCAAAGTCACGAGAACATATTTTATGTTTCAATCCCCTATACGCGGGTCACAAACGCATGGTCGGGGTGATGTTGCTGGGCTAGTTCCCGGGTTTCAATCCCCTATACGCGGGTCACAAACTATAGTTCTGTTATTTTGTTACCTGGAAGGTATTTGTTTCAATCCCCTATACGCGGGTCACAAACCAGGAAGAAAGAGGATATCACGCAATATTGGAACGGTTTCAATCCCCTATACGCGGGTCACAAACTAATTTTTTCTTTTAATTCTTGTCGATCTCTCACATGTTTCAATCCCCTATACGCGGGTCACAAACAAAGGGGAACTATTTCAATCAATCCAAGAGGCATTAGTTTCAATCCCCTATACGCGGGTCACAAACCTTAACTGTGATTCTGTTATAGTTCCCTGGATAAAGTTTCAATCCCCTATACGCGGGTCACAAACTTTTTTTACCTTGCTTGACTGTTTTTAAATTGCATAGTTTCAATCCCCTATACGCGGGTCACAAACTTCCCTTTCTACTTCCTTTGTGTTCATTTCACATTTGTTTCAATCCCCTATACGCGGGTCACAAACTATAGTCTATAGTGTAACCTGCGGCCTTAATCCGGGGTTTCAATCCCCTATACGCGGGTCACAAACTGTAATTCCTTTTATCTTGCGCTGTTATTCTATCAGGTTTCAATCCCCTATACGCGGGTCACAAACATGATAGTACCATGCGCATTTTTTGCCGGAGAATTGTTTCAATCCCCTATACGCGGGTCACAAACAGATAGGAGGCCAAACAATGACAGATAAACAATATAAGTTTCAATCCCCTATACGCGGGTCACAAACTTTGACAATGCGGTGCAACGTGGTTTTGTTTGGGAGTTTCAATCCCCTATACGCGGGTCACAAACAAAATAATTAAGGAGTGGTAAACAATGGCGAGAAAAGTTTCAATCCCCTATACGCGGGTCACAAACGTAAATGACCGCTTAGAGGAAACTAAGGATTTTATCGAGTTTCAATCCCCTATACGCGGGTCACAAACGTGGTACATTCAGAAAAGTACACTGGAACAACAATATGTTTCAATCCCCTATACGCGGGTCACAAACGTATTAATGGAGACACAGACGCATGTGAGGATTTACGTTTCAATCCCCTATACGCGGGTCACAAACGCATCAGGAAGGTATTTTCTTGCACTTTTGACGGTAGTTTCAATCCCCTATACGCGGGTCACAAACGTAAAATGCCGTAATATTGGGATTTATGACAATTAAAGTTTCAATCCCCTATACGCGGGTCACAAACGCAGGCGATGGCGATGTTACAACAGGTAATGCAAGGA
	GCATGGTCGGGGTGATGTTGCTGGGCTAGTTCCCGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATAGTTCTGTTATTTTGTTACCTGGAAGGTATTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGGAAGAAAGAGGATATCACGCAATATTGGAACG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAATTTTTTCTTTTAATTCTTGTCGATCTCTCACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGGGGAACTATTTCAATCAATCCAAGAGGCATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTAACTGTGATTCTGTTATAGTTCCCTGGATAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTTTTTACCTTGCTTGACTGTTTTTAAATTGCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTCCCTTTCTACTTCCTTTGTGTTCATTTCACATTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATAGTCTATAGTGTAACCTGCGGCCTTAATCCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTAATTCCTTTTATCTTGCGCTGTTATTCTATCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATGATAGTACCATGCGCATTTTTTGCCGGAGAATT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGATAGGAGGCCAAACAATGACAGATAAACAATATAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGACAATGCGGTGCAACGTGGTTTTGTTTGGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAATAATTAAGGAGTGGTAAACAATGGCGAGAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTAAATGACCGCTTAGAGGAAACTAAGGATTTTATCGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTGGTACATTCAGAAAAGTACACTGGAACAACAATAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTATTAATGGAGACACAGACGCATGTGAGGATTTAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCATCAGGAAGGTATTTTCTTGCACTTTTGACGGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTAAAATGCCGTAATATTGGGATTTATGACAATTAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAGGCGATGGCGATGTTACAACAGGTAATGCAAGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC

>NC_008346|9|8|2867020-2868370|PILER-CR
	GGAGAAAGAAGGGGTTGGGTATTGCCCCTATACTCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGGAGAAGAAGTTGAATGCGGTTGTTTTGCTGACGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCCCAGAATTGGTGTACTATGCGCCGATAGACAATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGGCGTGGTCGTTTGGGTGGTAGGGGACGCAACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGGCTGAGAAATTTCCAGCCAAACGGGGATGAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCTATTAGGGTGCATGGGCTTACCGTTCCATTGCG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGGTGGAGGCGGGTCGATCTATAAGTCAGCTGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATACCGACTTTTTTACTTATCGGCATCAACTTTTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGTTCCCGCTCCAATAATACCAACCTCCCCCTGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAGTAGGGGAATAAATGTTATATACCTTTTCAATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTATCACCTCACTTAATAACCCGTCTAATACTTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGCACTGCTACAAGCAGGCCAATGTCAACTCGTTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTGCGAGTAGCGCAAAAGACCTGGCCGGATGAGAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAGCAAATAGCCAAAACATAAAGCTTATGCTCTG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATGAAATTTTTCTGCCAGTCGGACTGCTCAATTTTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGAAACAGTGTGCTTTTGCCTATCCCCTGGGGTCCAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAATTCACCGTCCGCGGCCGTGCTGGCCCAGTACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAGAGAGGAAAGGTTTTTCCATGGTACGGTTTTAGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	GATAAGGTTAAGCCCACTCATATTTACGATTTCCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTATAGTGGGCTCCATACTCTGACCGGTAACCTC
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGGGTTTCGAACCCACGACTTCTACCGTGTGAATTATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAACAGAAAGGGGTGACATAATGCCAAACTATG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCGAAGTTGAATTCTATATTCCTACGCGCTGGGATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CGTACTTTTACCGCCGACCCGCTATATTCCAATGACA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCGCATCGGCGACAGAAACCTTCGCCCCCGTCAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCTAAAGTCATTTACCGGGAAACTTCGCCAGCAGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAAAGTCTTTGTTTGCCAGTATGTCGGCGGCAGGCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAATAATGCAGTAAAAAGACCAGGCCTGGCTACTAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGCTCCGGGCGATAATACCGGGGCAGTGATAGGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAGGGGAAACCTTGCAACGTGACCATGCACTTCCTCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGGCAAGTATTAAACAATGTTACCGGAAACCAGGTGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAAAGCCGGGGGCAATTCCCCGGCTTCAACTACT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTTTTCGCTGTCTAAATTGTCCAGGTCGTCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAGCATATCTTCAAATATTGGGTTGACCATTACGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAAACATATCCCGGAAAAGGCTATGCACGCAGGCCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCTGTTCCGGCGGCTCCTTCTGAAACTCCCTCGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CCCCGTGCCTTCAAGCTGCAGAAGCTATCATCGCCTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACAGAAAGCCCACGTCTTTAGGCGTGGGAGTATGT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GGTCAAAACAACCTCGTCCCCGACCTTAAGCCCCT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TCCGAGCCACTCCACTGGGACCATTCGTGCCACAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ACATCAACTGCCACAACTGCCTTTTGGCTACTTGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAAACGGGTATAGCATGCTTGATGGAAAACAACG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTGCCGGGACAAAATCAGCTACAATCAATGACGATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATTTCTACAGGCAATATATTCGGGTACTCTTACCCA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGATTGGCATTTTATTACCTTCTTTCATTTTTATAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GAAACGGTTATTTGGTTTCTATTTTAAATATTTATCCTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AATCATCAGTTCCAAAGTCACGAGAACATATTTTATGTTTCAATCCCCTATACGCGGGTCACAAACGCATGGTCGGGGTGATGTTGCTGGGCTAGTTCCCGGGTTTCAATCCCCTATACGCGGGTCACAAACTATAGTTCTGTTATTTTGTTACCTGGAAGGTATTTGTTTCAATCCCCTATACGCGGGTCACAAACCAGGAAGAAAGAGGATATCACGCAATATTGGAACGGTTTCAATCCCCTATACGCGGGTCACAAACTAATTTTTTCTTTTAATTCTTGTCGATCTCTCACATGTTTCAATCCCCTATACGCGGGTCACAAACAAAGGGGAACTATTTCAATCAATCCAAGAGGCATTAGTTTCAATCCCCTATACGCGGGTCACAAACCTTAACTGTGATTCTGTTATAGTTCCCTGGATAAAGTTTCAATCCCCTATACGCGGGTCACAAACTTTTTTTACCTTGCTTGACTGTTTTTAAATTGCATAGTTTCAATCCCCTATACGCGGGTCACAAACTTCCCTTTCTACTTCCTTTGTGTTCATTTCACATTTGTTTCAATCCCCTATACGCGGGTCACAAACTATAGTCTATAGTGTAACCTGCGGCCTTAATCCGGGGTTTCAATCCCCTATACGCGGGTCACAAACTGTAATTCCTTTTATCTTGCGCTGTTATTCTATCAGGTTTCAATCCCCTATACGCGGGTCACAAACATGATAGTACCATGCGCATTTTTTGCCGGAGAATTGTTTCAATCCCCTATACGCGGGTCACAAACAGATAGGAGGCCAAACAATGACAGATAAACAATATAAGTTTCAATCCCCTATACGCGGGTCACAAACTTTGACAATGCGGTGCAACGTGGTTTTGTTTGGGAGTTTCAATCCCCTATACGCGGGTCACAAACAAAATAATTAAGGAGTGGTAAACAATGGCGAGAAAAGTTTCAATCCCCTATACGCGGGTCACAAACGTAAATGACCGCTTAGAGGAAACTAAGGATTTTATCGAGTTTCAATCCCCTATACGCGGGTCACAAACGTGGTACATTCAGAAAAGTACACTGGAACAACAATATGTTTCAATCCCCTATACGCGGGTCACAAACGTATTAATGGAGACACAGACGCATGTGAGGATTTACGTTTCAATCCCCTATACGCGGGTCACAAACGCATCAGGAAGGTATTTTCTTGCACTTTTGACGGTAGTTTCAATCCCCTATACGCGGGTCACAAACGTAAAATGCCGTAATATTGGGATTTATGACAATTAAAGTTTCAATCCCCTATACGCGGGTCACAAACGCAGGCGATGGCGATGTTACAACAGGTAATGCAAGGA
	GCATGGTCGGGGTGATGTTGCTGGGCTAGTTCCCGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATAGTTCTGTTATTTTGTTACCTGGAAGGTATTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	CAGGAAGAAAGAGGATATCACGCAATATTGGAACG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TAATTTTTTCTTTTAATTCTTGTCGATCTCTCACAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAGGGGAACTATTTCAATCAATCCAAGAGGCATTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	CTTAACTGTGATTCTGTTATAGTTCCCTGGATAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTTTTTACCTTGCTTGACTGTTTTTAAATTGCATA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTCCCTTTCTACTTCCTTTGTGTTCATTTCACATTT
GTTTCAATCCCCTATACGCGGGTCACAAAC	TATAGTCTATAGTGTAACCTGCGGCCTTAATCCGGG
GTTTCAATCCCCTATACGCGGGTCACAAAC	TGTAATTCCTTTTATCTTGCGCTGTTATTCTATCAG
GTTTCAATCCCCTATACGCGGGTCACAAAC	ATGATAGTACCATGCGCATTTTTTGCCGGAGAATT
GTTTCAATCCCCTATACGCGGGTCACAAAC	AGATAGGAGGCCAAACAATGACAGATAAACAATATAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	TTTGACAATGCGGTGCAACGTGGTTTTGTTTGGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	AAAATAATTAAGGAGTGGTAAACAATGGCGAGAAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTAAATGACCGCTTAGAGGAAACTAAGGATTTTATCGA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTGGTACATTCAGAAAAGTACACTGGAACAACAATAT
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTATTAATGGAGACACAGACGCATGTGAGGATTTAC
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCATCAGGAAGGTATTTTCTTGCACTTTTGACGGTA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GTAAAATGCCGTAATATTGGGATTTATGACAATTAAA
GTTTCAATCCCCTATACGCGGGTCACAAAC	GCAGGCGATGGCGATGTTACAACAGGTAATGCAAGGA
GTTTCAATCCCCTATACGCGGGTCACAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008346.1\|WP_011641873.1\|2852028_2852391_-\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_011641883.1\|2869611_2869875_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_008346.1\|WP_011641884.1\|2869887_2870880_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NC_008346.1\|WP_155814243.1\|2852440_2852614_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131701
NC_008346.1\|WP_011641876.1\|2853486_2853705_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380294
NC_008346.1\|WP_011641891.1\|2877526_2878147_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NC_008346.1\|WP_011641886.1\|2871405_2873751_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_008346.1\|WP_011641879.1\|2855054_2855393_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NC_008346.1\|WP_011641877.1\|2853915_2854158_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224423
NC_008346.1\|WP_011641885.1\|2870899_2871406_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_008346.1\|WP_011641459.1\|2855716_2856031_-\|transposase	unknown	unknown	gnl\|CDD\|366690
NC_008346.1\|WP_011641888.1\|2874471_2875377_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
NC_008346.1\|WP_011641875.1\|2853088_2853307_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NC_008346.1\|WP_041428126.1\|2873740_2874466_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NC_008346.1\|WP_011641878.1\|2854787_2855042_-\|transposase	unknown	unknown	gnl\|CDD\|372671
NC_008346.1\|WP_011641882.1\|2868617_2869559_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|187890
NC_008346.1\|WP_041428125.1\|2852721_2853084_-\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|375906
NC_008346.1\|WP_041427611.1\|2854489_2854708_-\|hypothetical-protein	unknown	unknown	unknown
NC_008346.1\|WP_081424869.1\|2875378_2875864_-\|hypothetical-protein	cas8b1	mkCas0119_cas8b1_CAS-I-B	gnl\|CDD\|378190
NC_008346.1\|WP_162010621.1\|2875818_2877261_-\|hypothetical-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|378190

Protein	Function_ID	Function_description	E-value
NC_008346.1\|WP_162010621.1\|2875818_2877261_-\|hypothetical-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	1.79542e-24
NC_008346.1\|WP_011641883.1\|2869611_2869875_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	9.67307e-33
NC_008346.1\|WP_011641884.1\|2869887_2870880_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.19526e-171
NC_008346.1\|WP_155814243.1\|2852440_2852614_-\|hypothetical-protein	gnl\|CDD\|131701	TIGR02653, putative_ATP-dependent_Lon_protease, conserved hypothetical protein. This model describes a protein family of unknown function, about 690 residues in length, in which some members show C-terminal sequence similarity to pfam05362, which is the Lon protease C-terminal proteolytic domain, from MEROPS family S16. However, the annotated catalytic sites of E. coli Lon protease are not conserved in members of this family. Members have a motif GP[RK][GS]TGKS, similar to the ATP-binding P-loop motif GxxGxGK[ST]. [Hypothetical proteins, Conserved].	7.25093e-08
NC_008346.1\|WP_011641876.1\|2853486_2853705_-\|hypothetical-protein	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	5.72187e-19
NC_008346.1\|WP_011641891.1\|2877526_2878147_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	3.4824e-11
NC_008346.1\|WP_011641886.1\|2871405_2873751_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.419e-44
NC_008346.1\|WP_011641879.1\|2855054_2855393_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.98184e-13
NC_008346.1\|WP_011641877.1\|2853915_2854158_+\|hypothetical-protein	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.38302e-08
NC_008346.1\|WP_011641885.1\|2870899_2871406_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	9.17764e-74
NC_008346.1\|WP_011641459.1\|2855716_2856031_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	1.80212e-09
NC_008346.1\|WP_011641888.1\|2874471_2875377_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	4.80271e-67
NC_008346.1\|WP_011641875.1\|2853088_2853307_-\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.00765e-20
NC_008346.1\|WP_041428126.1\|2873740_2874466_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	8.09345e-35
NC_008346.1\|WP_011641878.1\|2854787_2855042_-\|transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	1.50767e-17
NC_008346.1\|WP_011641882.1\|2868617_2869559_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|187890	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex.	1.5914e-19
NC_008346.1\|WP_041428125.1\|2852721_2853084_-\|DUF5615-family-PIN-like-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	5.39689e-19
NC_008346.1\|WP_081424869.1\|2875378_2875864_-\|hypothetical-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	1.277e-08

>NC_008346.1|WP_011641459.1|2855716_2856031_-|transposase
MKKANKYSDELKEKIIRECQEIDNVAVVARRYEISPNTIHTWVKKYRERGTAKTLKKNGFKDINTMAEQLKKVSTENDQLKRLVAEKELELSILRELRDKTNPR
>NC_008346.1|WP_011641879.1|2855054_2855393_-|DDE-type-integrase/transposase/recombinase
MCKEIGILRPQRVLKPYRPGQIGHKRKAIGPNEHWEIDLKYGYIKGISQFFYQISIIDIFDRTIVENHIGLSAKAKDAARIVQIAAKKRGIKPDQLVIRSDNGPQFRAKAFT
>NC_008346.1|WP_011641878.1|2854787_2855042_-|transposase
MKITHERIPVNSPNLNAYIESFHSILEDECYSRHEFETFQEAYEEVNKYLDYYNNRRRHGSIGYQSPVVYYQKHQNARGKPLVA
>NC_008346.1|WP_041427611.1|2854489_2854708_-|hypothetical-protein
MPRKPEDLIKELENNITKMSIHTNPKVRTDIEKNYFLLGELIENNDIHARRSRNHLFGVKSVQQEKVPNKKK
>NC_008346.1|WP_011641877.1|2853915_2854158_+|hypothetical-protein
MLHRDDRDYGSYRLYNVANRKDTLLLSSDIPIKDVGHSYPVSFKASDGHTVFGYLTLPLGKSPRNLPLIVNVHGGPTTVD
>NC_008346.1|WP_011641876.1|2853486_2853705_-|hypothetical-protein
MIDISKSDWDSYQTSCSARKAAKELTRLDKQTLELKKYEELVHHYADMRIPLDLDDRVKVNYAKLGELLAKI
>NC_008346.1|WP_011641875.1|2853088_2853307_-|DUF433-domain-containing-protein
MLGYNRITFDQSIMGGQACIRGMRITVSLLVGLVARGKSFTDIIQEYPDLEVEDIQQALEYAAWLAREQVYG
>NC_008346.1|WP_041428125.1|2852721_2853084_-|DUF5615-family-PIN-like-protein
MRFLADMGISQHTISWLRRQGFDAVHLREERLQRSPDNEVLAKAARENRILLTMDLDFGYLVAISEQIIPAVIIFRLSDERSEIVNSRLSEVLVKCAGDIQSGVIISVSDRTIRIRRLPI
>NC_008346.1|WP_155814243.1|2852440_2852614_-|hypothetical-protein
MEREQIEQIRSTGLEPTQLEPAMKWHLLLRPPELLIKVQPIFYSDPIDAVFKALGAV
>NC_008346.1|WP_011641873.1|2852028_2852391_-|hypothetical-protein
MDRKERFLNSQDFENLKLTSNLGELVSKLIALFENEGFRFYPEWRGIHKTGKLRKNFTFKAKQPAGKSENIVTIYPMSGWLKVETYRGQYNKKHYQVNVGNIDDPAQLKTLLDDAKDIYN
>NC_008346.1|WP_011641882.1|2868617_2869559_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MIKLEISCLEFTLSSNQAVEMAPFIGSTIRGVFGNILKDSCCVEPRGKCSECMLRNRCVYTYLFESGWYFSNGERQQSGVPQPYVFEPTIYNNAEMKSGQAELKLGLLLFGNSIDYLPVFVHCIKIISKWGLGKNHIAYELERVEDLFGQKQVWHKGSTIMIKRPHTKTWDDYRKEAQSKNIIKRCQIELITPLRLKKEGHLQSKLDFSTIVKAIIRRWNLLNKYYGTGQKNDDSEIINSAATIPSGTLNLHWQEMERYSRRQDQRMMLGGMMGIMECSGELNPFLPWLLLGEDIHIGKNASFGLGKYKLTLM
>NC_008346.1|WP_011641883.1|2869611_2869875_-|CRISPR-associated-endonuclease-Cas2
MLVIMVYDVEVKRVAKVLKTGRKYLYWVQNSVLEGNINEGSFKKLKAELSRIIDHEYDSIIFYTFRTSKYSEREIMGIEKGGESQFL
>NC_008346.1|WP_011641884.1|2869887_2870880_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKAIYVFNEGKFKRKDNTLYFETEQGKRYIPVEDINEIHVYGEVDLNKRFLEFLTQKEIILHFYNNYGYYSGSYYPREHLNSGYMTLHQAEHYLDEQRRLMLAKLFVQGASANMLEVLKYYHNRGKDLTRALQSIGNLIDRIDESVSVEVLMAVEGNIRDAYYSAFNTIIDKSDFLFEGRNRRPPRDRINALISFGNTMTYTACLSEIYRTHLDPRISYLHTTNFRRFSLNLDIAEIFKPILVDRIIFYLLARNMLRSTHFENKMGGILLNDKGRQVFVNEWEKRLRTTIKHRDIGHEVSYRRLIRLELYKLEKHLIGEKLYKAYVSRW
>NC_008346.1|WP_011641885.1|2870899_2871406_-|CRISPR-associated-protein-Cas4
MPETEFQVNGTLIWYYYICKRQVWLMAHALGPDQEDNNLYQGRTIHEFSYQRDKKEINLGNIKIDLVRSEKGRLIIGEIKKSSKFLTSATRQLQFYLWQIEQMGIAACGELFIPEEKQRIEVILDEEARLELETATKKIIDIVEKAAPPPAQKIKWCKPCAYAEFCWA
>NC_008346.1|WP_011641886.1|2871405_2873751_-|CRISPR-associated-helicase/endonuclease-Cas3
MRGKPCSHPGKQLEKHLINTGNIALLMAEHYSLTLDETERSALLMHDIGKAHSAFQKRLCRACPAANTCAELCRQSPPEQVYTGHAAPSAALVLAKTGNIILAEAVRRHHGALQNLDEIKSYWINGEYADRIKELTALYTWPGMSTLGLWDEIPADFIKSFPDEISWENLCFDQLEILLPVDNPEAMSHLWLELRKIYSLLVTADRWDAAVGTEWQAKYWHPQAQKFTQFIQQKRLESQHSGRSELALWRTALYEKAVNNATQIMDKPGLYTLTLPTGAGKTLIGLSLASMAAERFKATGIIYILPFISLVDQNAGVAGQLFDQVQEDHHLAYRDDGDDKKPDYGSDNQAGEFLSFFRYWDMPVVVTTLSKLWDVMYSPRANDNMNFHRLSQAVVLLDEPQSIPVKYWDGIGRTLELISQQWGSTFILMTATQPVIIQGKELTPETVAFPKERHKIIWQNHALDIDKLPDFLDDRGWAQKDCLVILNTRESALRTYLAALKRGLPTLLLSRWLTPHDRQRILDQLIKMEHNELQRTLISTQVVEAGVDLDFAMVIRDLAPFDSIVQAAGRCNRHAQREGLAELWVIEVKDDRNRSLSSYIYDKTLLNQTRNLLNEQGILRESAIAARVTEYYRRLSSAVIPDEIWPDIIKGHWGAYHPLYDEQIPEAALLIDEDGSIEELLNELPALPPGLKSLSRRRSINRELGQHTINVGLKYLQEWDDSLSGFIIAKDKPVLEKTPFSWWILHAEGIGQVYSKDSGFIPLKYSQQYQDIVLPVDGGDF
>NC_008346.1|WP_041428126.1|2873740_2874466_-|type-I-B-CRISPR-associated-protein-Cas5
MALVFDIEGDMALFRKPYTTTSMVSYPFPPPTAIAGLIAGIIGINHEASQDAKNARYWEKMREVQVAIALLSPIRWINTAVNLMKYKNSNADMSEHIQVKHQLVKKPRYRIYVQGGEIYKILKQRLEREEFIYTPCLGAAYALADIKYHGEYEPAEAEMDSGFNTIVPGYEGLELDIVRSGAVFSEQIPVQMTVTRCLSHTVQVYYAQPGKAGSPLLYLRNQGALQSNMINGEKVAWFNAW
>NC_008346.1|WP_011641888.1|2874471_2875377_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MAFKQRREYLFLYTVKDANPNGDPLNENHPRYDGDTAQAMASDVRVKRTTRDEWVRSGEIVFVDGEPKSLKTRFEELKKITGKSDAREIMKQCLDVRLFGVTFALGKEAFAWTGPVQFKWGRSLHSASFEFVQGTAAFATERGGADNRQRSFRNEYLVPFALMGVYAIANQYASQYTDAADEDLQRMLDGLWQGTDNLITRSKNEHKSRLLIEITYKEDFNGKIGALDDKVTLLDREGKVMDREKQKALRSLQEVSLDIGALLKSMELKQEQIAGIRVITDGEINIIQEEQLKGISSIEVR
>NC_008346.1|WP_081424869.1|2875378_2875864_-|hypothetical-protein
MGRIYEPIKSGGEQMNLDIFTKFHDPYMQTPAGQGALLSGVLLGYMAVRQASGDTDISKSPLFKQIQFGRMDSASLKRLLSRVPTLLAAYREDMKYTGYMSQLSAAAMELLLQSGEEDMGVNGNFALAAGFLNARQYFWDIFLVSKESKELKNEKDEKEEG
>NC_008346.1|WP_162010621.1|2875818_2877261_-|hypothetical-protein
MMGFLRAMQQMGQSEKKEGLEPYLVRPMAQDGKEIRVWLQVKGDLQETLDIVGVSRMDLADYKANALSLKKYMYKKAPSQTTASFSPIHPAGKMKNNAEQNRAAFCPPQWEDNKDTHFFKIKNRILNDYEREGVFSAGSVERILQGMQGKIDMVLTDLDNQQSYIVIFVVEHNGDLLYPGEVPALAKYFERKLKISLSGGKKAVKKPDHTHQNCSICGKNNSGTVTLDKIFKFATFDKVSVLAGLDKKGIPYNFSICQSCFEQISSGREKVDRILTKRGLLPDILVWAMPEAIGYGEKALFEKFLYSWEEKLTAAELAGTGEKTEERYFSRLARIGQGMVFHFIFWQKNNSQEIVHLMVEDVPPERLARLETAWQKVTREFAGWHKDTDLDTAMKSIYKTMSAFAGKSSADKIIFRNFALKVIANMLQGEVLPVDTFKQLIVPRLPRLVFEGDSKKAGLSMRYAELWVEYMNRLNQEVSR
>NC_008346.1|WP_011641891.1|2877526_2878147_-|sigma-70-family-RNA-polymerase-sigma-factor
MTTTTGNCALNSMVQALAAGDDRAWQELMQTPWYSYALWKMEFNFGNDGEDLMQEALTDLYLALNRYLNSGNSITSLKALFLKIVNRNKNTYLDKYYRRSGIVTQISYEAESMENYQLLNEPDDYEQLEDKLLLSSYIPALQEAVLAAKIKPEEWDIIIAYYAYNESDRSIAVRLKKPINTIKSKRQRAMARLQKKCKESRGKSIC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_008346_2	2.14\|565637\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	565637-565671	35	MN694042	Marine virus AFVG_250M538, complete genome	27034-27068	6	0.829
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NC_014172	Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence	80322-80355	6	0.824
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP009595	Bacillus cereus strain 3a plasmid pBFC_3, complete sequence	243623-243656	6	0.824
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP009606	Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence	109858-109891	6	0.824
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP053994	Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence	183629-183662	6	0.824
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	CP016196	Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-2, complete sequence	89892-89925	6	0.824
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP053992	Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence	166645-166678	6	0.824
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	215025-215058	6	0.824
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	CP002510	Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28, complete sequence	73316-73349	6	0.824
NC_008346_2	2.56\|568454\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	568454-568487	34	NZ_CP024777	Bacillus thuringiensis LM1212 plasmid pLM6, complete sequence	2067-2100	6	0.824
NC_008346_2	2.56\|568454\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	568454-568487	34	NZ_CP041079	Bacillus tropicus strain LM1212-W3 plasmid p6, complete sequence	4364-4397	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP044174	Campylobacter jejuni strain AR-0412 plasmid pAR-0412, complete sequence	25488-25521	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP018901	Campylobacter coli strain YH502 plasmid pCOS502, complete sequence	108626-108659	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP044176	Campylobacter coli strain AR-0411 plasmid pAR-0411, complete sequence	69150-69183	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP025282	Campylobacter coli strain YH503 plasmid pCOS503, complete sequence	91157-91190	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039088	Piscirickettsia salmonis strain Psal-111 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039113	Piscirickettsia salmonis strain Psal-135 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039061	Piscirickettsia salmonis strain Psal-099 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP038905	Piscirickettsia salmonis strain Psal-008 plasmid unnamed1, complete sequence	16195-16228	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP038928	Piscirickettsia salmonis strain Psal-013 plasmid unnamed1, complete sequence	16536-16569	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039093	Piscirickettsia salmonis strain Psal-114 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039172	Piscirickettsia salmonis strain Psal-138 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP012511	Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-3, complete sequence	128927-128960	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013824	Piscirickettsia salmonis strain PM25344B plasmid p3PS14, complete sequence	128979-129012	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013804	Piscirickettsia salmonis strain PM22180B plasmid p3PS13, complete sequence	128928-128961	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039869	Piscirickettsia salmonis strain Psal-113 plasmid unnamed1, complete sequence	24915-24948	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039071	Piscirickettsia salmonis strain Psal-108 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039103	Piscirickettsia salmonis strain Psal-118 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039177	Piscirickettsia salmonis strain Psal-139 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039108	Piscirickettsia salmonis strain Psal-134 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039051	Piscirickettsia salmonis strain Psal-081 plasmid unnamed1, complete sequence	24915-24948	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013946	Piscirickettsia salmonis strain PSCGR01 plasmid pPsCRG01-1, complete sequence	126112-126145	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039056	Piscirickettsia salmonis strain Psal-098 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039078	Piscirickettsia salmonis strain Psal-109 plasmid unnamed2, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039082	Piscirickettsia salmonis strain Psal-110 plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP038919	Piscirickettsia salmonis strain Psal-010b plasmid unnamed1, complete sequence	16687-16720	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP038899	Piscirickettsia salmonis strain Psal-006b plasmid unnamed1, complete sequence	24915-24948	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP048060	Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p4, complete sequence	89960-89993	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP048053	Piscirickettsia salmonis strain Ps-11091B plasmid Ps11091B-p1, complete sequence	153875-153908	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013797	Piscirickettsia salmonis strain AY6532B plasmid p1PS9, complete sequence	167395-167428	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013787	Piscirickettsia salmonis strain PM58386B plasmid p1PS7, complete sequence	70806-70839	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013820	Piscirickettsia salmonis strain AY3800B plasmid p4PS10, complete sequence	167397-167430	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013792	Piscirickettsia salmonis strain AY6297B plasmid p1PS8, complete sequence	167364-167397	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013815	Piscirickettsia salmonis strain AY3864B plasmid p4PS11, complete sequence	167396-167429	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP011850	Piscirickettsia salmonis LF-89 = ATCC VR-1361 plasmid pPSLF89-1, complete sequence	120163-120196	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039098	Piscirickettsia salmonis strain Psal-117 plasmid unnamed1, complete sequence	149710-149743	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP039047	Piscirickettsia salmonis strain Psal-073 plasmid unnamed1, complete sequence	111117-111150	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013807	Piscirickettsia salmonis strain PM31429B plasmid p1PS12, complete sequence	70803-70836	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP048063	Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p7, complete sequence	16689-16722	6	0.824
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP013782	Piscirickettsia salmonis strain PM49811B plasmid p1PS6, complete sequence	70799-70832	6	0.824
NC_008346_2	2.19\|565975\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	565975-566008	34	NC_003042	Clostridium perfringens str. 13 plasmid pCP13, complete sequence	16597-16630	7	0.794
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_LR217736	Candidatus Erwinia haradaeae strain ErCisplendens isolate 3004 plasmid pBioThi	8905-8938	7	0.794
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_LN908215	Clostridium beijerinckii isolate C. beijerinckii DSM 6423 plasmid III	3366-3399	7	0.794
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NC_019308	Lactococcus lactis subsp. lactis plasmid pIL6, complete sequence	8222-8255	7	0.794
NC_008346_2	2.36\|567114\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567114-567147	34	MN694586	Marine virus AFVG_250M370, complete genome	13325-13358	7	0.794
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	62487-62519	7	0.788
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	73203-73235	7	0.788
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	KP211958	Cyanophage P-TIM40, complete genome	56988-57020	7	0.788
NC_008346_9	9.24\|2857681\|36\|NC_008346\|CRISPRCasFinder,CRT	2857681-2857716	36	NZ_CP021873	Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence	20846-20881	7	0.806
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	118875-118908	7	0.794
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP014203	Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence	50630-50663	7	0.794
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	979092-979126	7	0.8
NC_008346_9	9.104\|2862964\|35\|NC_008346\|CRISPRCasFinder,CRT	2862964-2862998	35	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	1182600-1182634	7	0.8
NC_008346_2	2.14\|565637\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	565637-565671	35	MN694303	Marine virus AFVG_250M806, complete genome	22914-22948	8	0.771
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	663044-663077	8	0.765
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	432176-432209	8	0.765
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_CP010270	Paenibacillus polymyxa strain Sb3-1 plasmid pSb31l, complete sequence	197522-197555	8	0.765
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_LR215001	Mycoplasma conjunctivae strain NCTC10147 plasmid 5	7840-7873	8	0.765
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	66856-66889	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	217313-217346	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	132522-132555	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP009940	Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence	21542-21575	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP043831	Bacillus sp. BS98 plasmid unnamed1	192027-192060	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	272500-272533	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	271068-271101	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	260307-260340	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	299356-299389	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	340646-340679	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NC_010933	Bacillus cereus strain G9241 plasmid pBC210, complete sequence	166038-166071	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	15734-15767	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	30103-30136	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP009591	Bacillus cereus G9241 plasmid pBC210, complete sequence	86063-86096	8	0.765
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	104856-104889	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MT375529	Pelagibacter phage Kolga EXVC01, complete genome	33021-33054	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250021	Prevotella phage Lak-B2, complete genome	474712-474745	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250024	Prevotella phage Lak-B5, complete genome	467320-467353	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250028	Prevotella phage Lak-B9, complete genome	471751-471784	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250023	Prevotella phage Lak-B4, complete genome	473946-473979	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250025	Prevotella phage Lak-B6, complete genome	470413-470446	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250022	Prevotella phage Lak-B3, complete genome	470504-470537	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250027	Prevotella phage Lak-B8, complete genome	474475-474508	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250026	Prevotella phage Lak-B7, complete genome	473513-473546	8	0.765
NC_008346_2	2.40\|567383\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567383-567416	34	MK250020	Prevotella phage Lak-B1, complete genome	471734-471767	8	0.765
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	98100-98132	8	0.758
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	108816-108848	8	0.758
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	95768-95800	8	0.758
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	141205-141237	8	0.758
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	558803-558835	8	0.758
NC_008346_2	2.45\|567717\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567717-567751	35	NZ_KT901798	Clostridium botulinum strain GA0702E1CS plasmid pGA0702E1CS, complete sequence	51888-51922	8	0.771
NC_008346_2	2.45\|567717\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567717-567751	35	NZ_CP034325	Klebsiella pneumoniae isolate KSH203 plasmid pKSH203-CTX-M-3, complete sequence	22810-22844	8	0.771
NC_008346_6	6.14\|2000240\|37\|NC_008346\|PILER-CR,CRISPRCasFinder,CRT	2000240-2000276	37	NC_017180	Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB01, complete sequence	30330-30366	8	0.784
NC_008346_6	6.15\|2000313\|35\|NC_008346\|PILER-CR,CRISPRCasFinder,CRT	2000313-2000347	35	MN694246	Marine virus AFVG_250M226, complete genome	22294-22328	8	0.771
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_004974	Fusobacterium nucleatum plasmid pFN1, complete sequence	3444-3477	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_002002	Fusobacterium nucleatum plasmid pPA52, complete sequence	47-80	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP053470	Fusobacterium nucleatum strain Fn12230 plasmid pFN1, complete sequence	4794-4827	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP015808	Borrelia mayonii strain MN14-1539 plasmid lp36	17966-17999	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP015793	Borrelia mayonii strain MN14-1420 plasmid lp36, complete sequence	17966-17999	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	906951-906984	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_003042	Clostridium perfringens str. 13 plasmid pCP13, complete sequence	41660-41693	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_023917	Clostridium perfringens plasmid pCP-OS1 DNA, complete sequence, strain: OS1	41881-41914	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_023918	Clostridium perfringens plasmid pCP-TS1 DNA, complete sequence, strain: TS1	41863-41896	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_MK275619	Clostridium perfringens strain JXJA17 plasmid p1, complete sequence	18992-19025	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	MG744354	Lactobacillus phage Satyr, complete genome	3755-3788	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	MG765274	Lactobacillus phage Maenad, complete genome	3770-3803	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP035095	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence	292213-292246	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	KY794641	Staphylococcus phage vB_Sau_CG, complete genome	88271-88304	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP009921	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence	184731-184764	8	0.765
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_010181	Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence	9877-9910	8	0.765
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	51233-51267	8	0.771
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	MN694366	Marine virus AFVG_250M1050, complete genome	10358-10392	8	0.771
NC_008346_9	9.143\|2865533\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2865533-2865566	34	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	542992-543025	8	0.765
NC_008346_9	9.156\|2866389\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2866389-2866423	35	NZ_CP033462	Brevibacillus laterosporus strain 1821L plasmid p1821L02, complete sequence	6999-7033	8	0.771
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NC_021789	Cellulophaga phage phi19:3, complete genome	20886-20919	9	0.735
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_CP043832	Bacillus sp. BS98 plasmid unnamed2	119161-119194	9	0.735
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_KT897276	Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence	90664-90696	9	0.727
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_KT897280	Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence	100297-100329	9	0.727
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	95587-95619	9	0.727
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_KT897277	Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence	90664-90696	9	0.727
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_KT897278	Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence	97722-97754	9	0.727
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_KT897279	Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence	98858-98890	9	0.727
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NC_008012	Lawsonia intracellularis PHE/MN1-00 plasmid 1, complete sequence	5587-5619	9	0.727
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NC_020128	Lawsonia intracellularis N343 plasmid 1, complete sequence	5633-5665	9	0.727
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_CP031139	Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete sequence	20388-20420	9	0.727
NC_008346_2	2.46\|567784\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567784-567817	34	MT939487	Erwinia phage pEa_SNUABM_47, complete genome	234849-234882	9	0.735
NC_008346_2	2.46\|567784\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567784-567817	34	MT939486	Erwinia phage pEa_SNUABM_12, complete genome	235589-235622	9	0.735
NC_008346_2	2.46\|567784\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567784-567817	34	NC_041917	Serratia phage BF, complete genome	235562-235595	9	0.735
NC_008346_2	2.46\|567784\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567784-567817	34	MT939488	Erwinia phage pEa_SNUABM_50, complete genome	234720-234753	9	0.735
NC_008346_6	6.15\|2000313\|35\|NC_008346\|PILER-CR,CRISPRCasFinder,CRT	2000313-2000347	35	MT774389	CrAssphage cr116_1, complete genome	86292-86326	9	0.743
NC_008346_9	9.31\|2858143\|36\|NC_008346\|CRISPRCasFinder,CRT	2858143-2858178	36	NZ_LR699118	Aquicella lusitana strain SGT-39 plasmid 5	1593-1628	9	0.75
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP018877	Bacillus megaterium strain JX285 plasmid 4, complete sequence	87934-87967	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP048054	Piscirickettsia salmonis strain Ps-11091B plasmid Ps11091B-p2, complete sequence	63243-63276	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	CP003185	Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262, complete genome	16499-16532	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_019956	Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01, complete sequence	76728-76761	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	180567-180600	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	1785-1818	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	MT119360	Enterococcus phage nattely, complete genome	4358-4391	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	47198-47231	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_015917	Borreliella bissettii DN127 plasmid lp28-4, complete sequence	8494-8527	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	194657-194690	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP034685	Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence	163429-163462	9	0.735
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	CP002030	Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence	13612-13645	9	0.735
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	AP013556	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S32-C64, * SEQUENCING IN PROGRESS *, 6 ordered pieces	16574-16608	9	0.743
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	NZ_AP018256	Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome	290180-290214	9	0.743
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	AP013557	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S41-C64, * SEQUENCING IN PROGRESS *, 3 ordered pieces	17927-17961	9	0.743
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	AP014411	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S42-C174, * SEQUENCING IN PROGRESS *, 3 ordered pieces	7069-7103	9	0.743
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	AP013641	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28B-MedDCM-OCT-S36-C223, * SEQUENCING IN PROGRESS *	4475-4509	9	0.743
NC_008346_9	9.113\|2863554\|35\|NC_008346\|CRISPRCasFinder,CRT	2863554-2863588	35	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	611803-611837	9	0.743
NC_008346_9	9.115\|2863685\|37\|NC_008346\|CRISPRCasFinder,CRT	2863685-2863721	37	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	389656-389692	9	0.757
NC_008346_9	9.150\|2865995\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2865995-2866029	35	NC_048682	Raoultella phage Ro1, complete genome	22574-22608	9	0.743
NC_008346_9	9.150\|2865995\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2865995-2866029	35	NC_048647	UNVERIFIED: Klebsiella phage KNP2 genomic sequence	114073-114107	9	0.743
NC_008346_9	9.150\|2865995\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2865995-2866029	35	MT939253	Klebsiella phage vB_KpnM_Seu621, complete genome	121843-121877	9	0.743
NC_008346_9	9.150\|2865995\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2865995-2866029	35	KX452695	UNVERIFIED: Klebsiella phage KPN2 genomic sequence	114073-114107	9	0.743
NC_008346_9	9.150\|2865995\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2865995-2866029	35	NC_048656	Klebsiella phage vB_KpnM_BIS47, complete genome	110051-110085	9	0.743
NC_008346_9	9.150\|2865995\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2865995-2866029	35	NC_028659	Klebsiella phage vB_KpnM_KB57, complete genome	123262-123296	9	0.743
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	MN693542	Marine virus AFVG_25M165, complete genome	54957-54990	10	0.706
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	AP013777	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C94-MedDCM-OCT-S24-C128, * SEQUENCING IN PROGRESS *	11748-11781	10	0.706
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NZ_CP012476	Bacillus clausii strain ENTPro plasmid, complete sequence	7120-7153	10	0.706
NC_008346_2	2.24\|566307\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566307-566340	34	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	570404-570437	10	0.706
NC_008346_2	2.36\|567114\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567114-567147	34	MH533020	Acinetobacter phage ABPH49, complete genome	130261-130294	10	0.706
NC_008346_6	6.11\|2000023\|35\|NC_008346\|PILER-CR,CRISPRCasFinder,CRT	2000023-2000057	35	NZ_CP033050	Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence	312473-312507	10	0.714
NC_008346_6	6.11\|2000023\|35\|NC_008346\|PILER-CR,CRISPRCasFinder,CRT	2000023-2000057	35	NC_021803	Cellulophaga phage phi13:2, complete genome	18018-18052	10	0.714
NC_008346_9	9.15\|2857086\|37\|NC_008346\|CRISPRCasFinder,CRT	2857086-2857122	37	KY612839	Vibrio phage pVco-5, complete genome	72553-72589	10	0.73
NC_008346_9	9.27\|2857879\|35\|NC_008346\|CRISPRCasFinder,CRT	2857879-2857913	35	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	208322-208356	10	0.714
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_020292	Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p, complete sequence	134569-134602	10	0.706
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_LR214954	Mycoplasma neurolyticum strain NCTC10166 plasmid 4	14059-14092	10	0.706
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP009061	Borreliella afzelii K78 plasmid lp17, complete sequence	17675-17708	10	0.706
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	865437-865470	10	0.706
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP017876	Campylobacter coli strain ZV1224 plasmid pCCDM224S, complete sequence	3095-3128	10	0.706
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	CP013736	Campylobacter coli strain OR12 plasmid pOR12CC42, complete sequence	10828-10861	10	0.706
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP016898	Acinetobacter soli strain GFJ2 plasmid pGFJ2, complete sequence	68554-68587	10	0.706
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NC_017232	Borreliella afzelii PKo plasmid lp17, complete sequence	17290-17323	10	0.706
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_MH634990	Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence	24577-24610	10	0.706
NC_008346_9	9.37\|2858537\|36\|NC_008346\|CRISPRCasFinder,CRT	2858537-2858572	36	NC_010480	Synechococcus sp. PCC 7002 plasmid pAQ6, complete sequence	69780-69815	10	0.722
NC_008346_9	9.37\|2858537\|36\|NC_008346\|CRISPRCasFinder,CRT	2858537-2858572	36	NZ_CP016482	Synechococcus sp. PCC 7117 plasmid unnamed5, complete sequence	228080-228115	10	0.722
NC_008346_9	9.81\|2861443\|34\|NC_008346\|CRISPRCasFinder,CRT	2861443-2861476	34	NC_019364	Sulfitobacter guttiformis plasmid pSD118, complete sequence	41286-41319	10	0.706
NC_008346_9	9.104\|2862964\|35\|NC_008346\|CRISPRCasFinder,CRT	2862964-2862998	35	NZ_CP031163	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence	385406-385440	10	0.714
NC_008346_9	9.164\|2866915\|39\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2866915-2866953	39	NC_048677	Lactobacillus phage LpeD, complete genome	115742-115780	10	0.744
NC_008346_9	9.167\|2867116\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	2867116-2867150	35	NZ_CP053834	Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence	76809-76843	10	0.714
NC_008346_2	2.19\|565975\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	565975-566008	34	KJ019146	Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome	49431-49464	11	0.676
NC_008346_2	2.19\|565975\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	565975-566008	34	KJ019151	Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome	49434-49467	11	0.676
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_CP034874	Buchnera aphidicola (Hyadaphis tataricae) strain Hta plasmid pLeu, complete sequence	4810-4843	11	0.676
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NC_014749	Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence	12969-13002	11	0.676
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NZ_CP044174	Campylobacter jejuni strain AR-0412 plasmid pAR-0412, complete sequence	26112-26145	11	0.676
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	MN693152	Marine virus AFVG_25M11, complete genome	4284-4317	11	0.676
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	KX156762	Staphylococcus phage vB_SauS_IMEP5, complete genome	32353-32386	11	0.676
NC_008346_2	2.34\|566978\|35\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566978-567012	35	NZ_CP019901	Raoultella planticola strain GODA plasmid unnamed2	16545-16579	11	0.686
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	LR214964	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 10	37500-37533	11	0.676
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	93231-93264	11	0.676
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP024244	Escherichia coli O128:H27 strain 90-9281 plasmid unnamed, complete sequence	16635-16668	11	0.676
NC_008346_9	9.35\|2858406\|34\|NC_008346\|CRISPRCasFinder,CRT	2858406-2858439	34	NZ_CP025850	Escherichia coli strain 600468 plasmid p600468_158, complete sequence	6757-6790	11	0.676
NC_008346_9	9.50\|2859394\|35\|NC_008346\|CRISPRCasFinder,CRT	2859394-2859428	35	MH593836	Inoviridae sp. isolate ctbh10, complete genome	1514-1548	11	0.686
NC_008346_9	9.60\|2860058\|37\|NC_008346\|CRISPRCasFinder,CRT	2860058-2860094	37	MN694678	Marine virus AFVG_250M509, complete genome	32217-32253	11	0.703
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	NC_042140	Bacillus virus BM15, complete genome	142004-142037	12	0.647
NC_008346_2	2.23\|566241\|34\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	566241-566274	34	MH638309	Bacillus phage Hobo, complete genome	142004-142037	12	0.647
NC_008346_9	9.91\|2862103\|36\|NC_008346\|CRISPRCasFinder,CRT	2862103-2862138	36	GQ478088	Enterococcus phage phiFL4A, complete genome	4913-4948	12	0.667
NC_008346_9	9.91\|2862103\|36\|NC_008346\|CRISPRCasFinder,CRT	2862103-2862138	36	MN995824	UNVERIFIED: Enterococcus phage EFP1, complete genome	4907-4942	12	0.667
NC_008346_9	9.91\|2862103\|36\|NC_008346\|CRISPRCasFinder,CRT	2862103-2862138	36	MT747435	Enterococcus phage AE4_2, complete genome	4914-4949	12	0.667
NC_008346_2	2.44\|567652\|33\|NC_008346\|CRISPRCasFinder,CRT,PILER-CR	567652-567684	33	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	42327-42359	13	0.606

1. spacer 2.14|565637|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MN694042 (Marine virus AFVG_250M538, complete genome) position: , mismatch: 6, identity: 0.829

---taagcttatagcatcttgatttgctatttttttaa	CRISPR spacer
ttttaa---tgtagcatcttgctttgctattgttttaa	Protospacer
   ***   *.********** ********* ******

2. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_014172 (Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence) position: , mismatch: 6, identity: 0.824

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatacctccttggaatttaat----	Protospacer
 ***** ******************    *****

3. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009595 (Bacillus cereus strain 3a plasmid pBFC_3, complete sequence) position: , mismatch: 6, identity: 0.824

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatacctccttggaatttaat----	Protospacer
 ***** ******************    *****

4. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009606 (Bacillus cereus strain S2-8 plasmid pBFR_2, complete sequence) position: , mismatch: 6, identity: 0.824

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatacctccttggaatttaat----	Protospacer
 ***** ******************    *****

5. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053994 (Bacillus cereus strain FDAARGOS_780 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatacctccttggaatttaat----	Protospacer
 ***** ******************    *****

6. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to CP016196 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-2, complete sequence) position: , mismatch: 6, identity: 0.824

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatacctccttggaatttaat----	Protospacer
 ***** ******************    *****

7. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053992 (Bacillus cereus strain FDAARGOS_781 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.824

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatacctccttggaatttaat----	Protospacer
 ***** ******************    *****

8. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 6, identity: 0.824

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatacctccttggaatttaat----	Protospacer
 ***** ******************    *****

9. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to CP002510 (Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28, complete sequence) position: , mismatch: 6, identity: 0.824

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatacctccttggaatttaat----	Protospacer
 ***** ******************    *****

10. spacer 2.56|568454|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024777 (Bacillus thuringiensis LM1212 plasmid pLM6, complete sequence) position: , mismatch: 6, identity: 0.824

atatataagagtttatcgtgg--ttttgattatgga	CRISPR spacer
atatataagggtttatagtggttttttgattttt--	Protospacer
*********.****** ****  ******** *

11. spacer 2.56|568454|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041079 (Bacillus tropicus strain LM1212-W3 plasmid p6, complete sequence) position: , mismatch: 6, identity: 0.824

atatataagagtttatcgtgg--ttttgattatgga	CRISPR spacer
atatataagggtttatagtggttttttgattttt--	Protospacer
*********.****** ****  ******** *

12. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP044174 (Campylobacter jejuni strain AR-0412 plasmid pAR-0412, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaaaaaataaattttgtaaaataaattc	Protospacer
*********************.***** *.*

13. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP018901 (Campylobacter coli strain YH502 plasmid pCOS502, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaaaaaataaattttgtaaaataaattc	Protospacer
*********************.***** *.*

14. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP044176 (Campylobacter coli strain AR-0411 plasmid pAR-0411, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaaaaaataaattttgtaaaataaattc	Protospacer
*********************.***** *.*

15. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP025282 (Campylobacter coli strain YH503 plasmid pCOS503, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaaaaaataaattttgtaaaataaattc	Protospacer
*********************.***** *.*

16. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039088 (Piscirickettsia salmonis strain Psal-111 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

17. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039113 (Piscirickettsia salmonis strain Psal-135 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

18. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039061 (Piscirickettsia salmonis strain Psal-099 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

19. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP038905 (Piscirickettsia salmonis strain Psal-008 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

20. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP038928 (Piscirickettsia salmonis strain Psal-013 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

21. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039093 (Piscirickettsia salmonis strain Psal-114 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

22. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039172 (Piscirickettsia salmonis strain Psal-138 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

23. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP012511 (Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-3, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

24. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013824 (Piscirickettsia salmonis strain PM25344B plasmid p3PS14, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

25. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013804 (Piscirickettsia salmonis strain PM22180B plasmid p3PS13, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

26. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039869 (Piscirickettsia salmonis strain Psal-113 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

27. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039071 (Piscirickettsia salmonis strain Psal-108 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

28. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039103 (Piscirickettsia salmonis strain Psal-118 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

29. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039177 (Piscirickettsia salmonis strain Psal-139 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

30. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039108 (Piscirickettsia salmonis strain Psal-134 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

31. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039051 (Piscirickettsia salmonis strain Psal-081 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

32. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013946 (Piscirickettsia salmonis strain PSCGR01 plasmid pPsCRG01-1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

33. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039056 (Piscirickettsia salmonis strain Psal-098 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

34. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039078 (Piscirickettsia salmonis strain Psal-109 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

35. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039082 (Piscirickettsia salmonis strain Psal-110 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

36. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP038919 (Piscirickettsia salmonis strain Psal-010b plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

37. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP038899 (Piscirickettsia salmonis strain Psal-006b plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

38. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP048060 (Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p4, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

39. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP048053 (Piscirickettsia salmonis strain Ps-11091B plasmid Ps11091B-p1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

40. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013797 (Piscirickettsia salmonis strain AY6532B plasmid p1PS9, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

41. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013787 (Piscirickettsia salmonis strain PM58386B plasmid p1PS7, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

42. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013820 (Piscirickettsia salmonis strain AY3800B plasmid p4PS10, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

43. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013792 (Piscirickettsia salmonis strain AY6297B plasmid p1PS8, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

44. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013815 (Piscirickettsia salmonis strain AY3864B plasmid p4PS11, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

45. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP011850 (Piscirickettsia salmonis LF-89 = ATCC VR-1361 plasmid pPSLF89-1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

46. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039098 (Piscirickettsia salmonis strain Psal-117 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

47. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP039047 (Piscirickettsia salmonis strain Psal-073 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

48. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013807 (Piscirickettsia salmonis strain PM31429B plasmid p1PS12, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

49. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP048063 (Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p7, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

50. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP013782 (Piscirickettsia salmonis strain PM49811B plasmid p1PS6, complete sequence) position: , mismatch: 6, identity: 0.824

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttaaataaaaaaataaaattaataaaaattaaag	Protospacer
* *************** ** *******  **.*

51. spacer 2.19|565975|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_003042 (Clostridium perfringens str. 13 plasmid pCP13, complete sequence) position: , mismatch: 7, identity: 0.794

tttgtcataatcatccatcaggtgatacaatgcc	CRISPR spacer
tggctcataatcatccttcaggtgatacatcacc	Protospacer
*   ************ ************ ..**

52. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR217736 (Candidatus Erwinia haradaeae strain ErCisplendens isolate 3004 plasmid pBioThi) position: , mismatch: 7, identity: 0.794

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
taaataaatctttcataaattttttaaaactaaa	Protospacer
*  ********** * *************.. **

53. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN908215 (Clostridium beijerinckii isolate C. beijerinckii DSM 6423 plasmid III) position: , mismatch: 7, identity: 0.794

ttcataaatctttaaaaaattttttaaaatctaa---	CRISPR spacer
ataataaatcaataaaaaattttttaa---ctaaaat	Protospacer
 * *******  ***************   ****

54. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_019308 (Lactococcus lactis subsp. lactis plasmid pIL6, complete sequence) position: , mismatch: 7, identity: 0.794

ttcataaa--tctttaaaaaattttttaaaatctaa	CRISPR spacer
--cattgatttttttaaaaaaatttttaaaatataa	Protospacer
  *** .*  *.********* ********** ***

55. spacer 2.36|567114|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MN694586 (Marine virus AFVG_250M370, complete genome) position: , mismatch: 7, identity: 0.794

aaggaggtaaataaataaatgataaataacagta	CRISPR spacer
agaggtataaataaataaatgataaataaaatta	Protospacer
*..*. .********************** * **

56. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 7, identity: 0.788

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
aaatatatattttaaaattattttatatttgat	Protospacer
*.********* ***** ***********   .

57. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 7, identity: 0.788

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
aaatatatattttaaaattattttatatttgat	Protospacer
*.********* ***** ***********   .

58. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to KP211958 (Cyanophage P-TIM40, complete genome) position: , mismatch: 7, identity: 0.788

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
gattttatattggaaaaattttttatattgctt	Protospacer
.. * ******* ****** ************.

59. spacer 9.24|2857681|36|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP021873 (Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence) position: , mismatch: 7, identity: 0.806

caagtaataaagagattattaatttcatggaaaaaa	CRISPR spacer
taggaattaaagaaattattaatttcaaggaaaaat	Protospacer
.*.* * ******.************* *******

60. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.794

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ggatattaaaaaatgaattttataaaaaagaaca	Protospacer
 .* ** *******.***************** .

61. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP014203 (Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence) position: , mismatch: 7, identity: 0.794

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
gtttataaaaaaataaattttataataaaaaatg	Protospacer
    ********************* ***.** *

62. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.8

aaagaagaagataaaaatactattaaattaagtga	CRISPR spacer
tcagaagaagataaaaatattattacatttgatga	Protospacer
  *****************.***** *** ..***

63. spacer 9.104|2862964|35|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.8

taccggtgtccagccggaaggcagcatcggtgcgt	CRISPR spacer
tgcccctgtccagccggacggcagcatcggagcca	Protospacer
*.**  ************ *********** **

64. spacer 2.14|565637|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MN694303 (Marine virus AFVG_250M806, complete genome) position: , mismatch: 8, identity: 0.771

taagcttatagcatcttgatttgctatttttttaa	CRISPR spacer
tccccctttagcattttgatttgctatgtttttta	Protospacer
*   *.* ******.************ ***** *

65. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.765

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
atttaaaatctttaaataatttttttaaatcttt	Protospacer
 *.  *********** ******** ******

66. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 8, identity: 0.765

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
tcagtaaatgcttaaaaaattttttaaaaattat	Protospacer
*. .***** .****************** .**

67. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010270 (Paenibacillus polymyxa strain Sb3-1 plasmid pSb31l, complete sequence) position: , mismatch: 8, identity: 0.765

---ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
ggattcaagg---tttaaaaaatttttttaactctaa	Protospacer
   **** ..   *************** ** *****

68. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215001 (Mycoplasma conjunctivae strain NCTC10147 plasmid 5) position: , mismatch: 8, identity: 0.765

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
ctaattcaagtttaaaaatttttttaagatctaa	Protospacer
.* **  *  ******** ********.******

69. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 8, identity: 0.765

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
ttttaatatcttcaaaaacttttttaaaatcata	Protospacer
**.  * *****.***** ************  *

70. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatccctccttggaatataat----	Protospacer
 ***** ********* ********     ****

71. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

72. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009940 (Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

73. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

74. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

75. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

76. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

77. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

78. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

79. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_010933 (Bacillus cereus strain G9241 plasmid pBC210, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

80. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

81. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

82. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009591 (Bacillus cereus G9241 plasmid pBC210, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcatcgttatacctccttgaaatataat----	Protospacer
 ***** ***.**************     ****

83. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 8, identity: 0.765

cttcaaacattgttatacctccttg----ttaatatcc	CRISPR spacer
gttcaatcattgttatccctccttggaatataat----	Protospacer
 ***** ********* ********     ****

84. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MT375529 (Pelagibacter phage Kolga EXVC01, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
gaattacctcccttttaattatattagtatcatc	Protospacer
* **********. ************ .**..*

85. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

86. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

87. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

88. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

89. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

90. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

91. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

92. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

93. spacer 2.40|567383|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 8, identity: 0.765

gtattacctccccattaattatattatcattgta	CRISPR spacer
ttacctcttcccaattaattatataatcattgaa	Protospacer
 **.. *.**** *********** ******* *

94. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 8, identity: 0.758

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
aaatatatattgtcaaattattttatataaaat	Protospacer
*.*********** *** ********** .  .

95. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 8, identity: 0.758

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
aaatatatattgtcaaattattttatataaaat	Protospacer
*.*********** *** ********** .  .

96. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 8, identity: 0.758

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
aaatatatattgtcaaattattttatataaaat	Protospacer
*.*********** *** ********** .  .

97. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.758

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
aaatatatattgtcaaattattttatataaaat	Protospacer
*.*********** *** ********** .  .

98. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 8, identity: 0.758

agatatata-ttgtaaaaatattttatattgctc	CRISPR spacer
-atcatacgcttgtaaaaatattttttcttgctc	Protospacer
 . .***.. *************** * ******

99. spacer 2.45|567717|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT901798 (Clostridium botulinum strain GA0702E1CS plasmid pGA0702E1CS, complete sequence) position: , mismatch: 8, identity: 0.771

--ttaggcaattacaagtaaaatataaatatttagct	CRISPR spacer
agtttg--aattaaaactaaaatataaatatttttca	Protospacer
  ** *  ***** ** ****************  *

100. spacer 2.45|567717|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034325 (Klebsiella pneumoniae isolate KSH203 plasmid pKSH203-CTX-M-3, complete sequence) position: , mismatch: 8, identity: 0.771

ttaggcaattacaagtaaaatataaatatttagct	CRISPR spacer
tttaggttttatacgtaaaatataaatatttagat	Protospacer
** .*   ***.* ******************* *

101. spacer 6.14|2000240|37|NC_008346|PILER-CR,CRISPRCasFinder,CRT matches to NC_017180 (Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB01, complete sequence) position: , mismatch: 8, identity: 0.784

gattaccatgt---cgacgatagctataaaaaactatatg	CRISPR spacer
---tacgttatgcacgtcgatagctataacaaactatatg	Protospacer
   ***  *.*   ** ************ **********

102. spacer 6.15|2000313|35|NC_008346|PILER-CR,CRISPRCasFinder,CRT matches to MN694246 (Marine virus AFVG_250M226, complete genome) position: , mismatch: 8, identity: 0.771

ttcatcaaatattatctaataaagaattaataaag	CRISPR spacer
tatatttcatattatcgaataaagaaataataaac	Protospacer
* .**.  ******** ********* *******

103. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_004974 (Fusobacterium nucleatum plasmid pFN1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aaaaatattaaaataaattttataaaaaatctct	Protospacer
 ******  ********************

104. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_002002 (Fusobacterium nucleatum plasmid pPA52, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aaaaatattaaaataaattttataaaaaatctct	Protospacer
 ******  ********************

105. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP053470 (Fusobacterium nucleatum strain Fn12230 plasmid pFN1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aaaaatattaaaataaattttataaaaaatctct	Protospacer
 ******  ********************

106. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP015808 (Borrelia mayonii strain MN14-1539 plasmid lp36) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aataataaaaaattaaattctataaaaaaacaaa	Protospacer
 * ********* ******.*********. *..

107. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP015793 (Borrelia mayonii strain MN14-1420 plasmid lp36, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aataataaaaaattaaattctataaaaaaacaaa	Protospacer
 * ********* ******.*********. *..

108. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttcaataaaaaaataaattatataaaattgtata	Protospacer
*  **************** *******  * * .

109. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_003042 (Clostridium perfringens str. 13 plasmid pCP13, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
gatgataaaaaaataaattttattaaaactaata	Protospacer
 * .******************* ****  ** .

110. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_023917 (Clostridium perfringens plasmid pCP-OS1 DNA, complete sequence, strain: OS1) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
gatgataaaaaaataaattttattaaaactaata	Protospacer
 * .******************* ****  ** .

111. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_023918 (Clostridium perfringens plasmid pCP-TS1 DNA, complete sequence, strain: TS1) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
gatgataaaaaaataaattttattaaaactaata	Protospacer
 * .******************* ****  ** .

112. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_MK275619 (Clostridium perfringens strain JXJA17 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
gatgataaaaaaataaattttattaaaactaata	Protospacer
 * .******************* ****  ** .

113. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to MG744354 (Lactobacillus phage Satyr, complete genome) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
gaaactaaaaaaataaattttaaaaaattgttga	Protospacer
 *** ***************** ****  *  *.

114. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to MG765274 (Lactobacillus phage Maenad, complete genome) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
gaaactaaaaaaataaattttaaaaaattgttga	Protospacer
 *** ***************** ****  *  *.

115. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP035095 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
tatccaaaaaagataaattatataaaaaagagga	Protospacer
**    *****.******* ***********.*.

116. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to KY794641 (Staphylococcus phage vB_Sau_CG, complete genome) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aataataaaaaaacagattttataaaaagagggg	Protospacer
 * **********.*.************....**

117. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP009921 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
tatccaaaaaagataaattatataaaaaagagga	Protospacer
**    *****.******* ***********.*.

118. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_010181 (Bacillus mycoides KBAB4 plasmid pBWB402, complete sequence) position: , mismatch: 8, identity: 0.765

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
tacatagtaaaattaaattttataaaaatgaaag	Protospacer
** *  . **** *************** ***.*

119. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 8, identity: 0.771

aaagaagaagataaaaatactattaaattaagtga	CRISPR spacer
actatacaagataaaaatactataaaattaaatgg	Protospacer
*  . * **************** *******.**.

120. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to MN694366 (Marine virus AFVG_250M1050, complete genome) position: , mismatch: 8, identity: 0.771

aaagaagaagataaaaatactatta-aattaagtga	CRISPR spacer
aaagaagaagataaaactactgttatcactttatg-	Protospacer
**************** ****.***  *.*  .**

121. spacer 9.143|2865533|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 8, identity: 0.765

gcgcatcggcgacagaaaccttcgcccccgtcat	CRISPR spacer
atgcatcggcgacagaatccttctcctgcgaaat	Protospacer
..*************** ***** **. **  **

122. spacer 9.156|2866389|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033462 (Brevibacillus laterosporus strain 1821L plasmid p1821L02, complete sequence) position: , mismatch: 8, identity: 0.771

acagaaagcccacgtctttaggcgtgggagtatgt	CRISPR spacer
cgggaaagcccacttctttaggtgtgggagtgtca	Protospacer
  .********** ********.********.*

123. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_021789 (Cellulophaga phage phi19:3, complete genome) position: , mismatch: 9, identity: 0.735

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
gacctaaatctttaaaaaataatttaaaaccgtc	Protospacer
  * ****************  *******.*

124. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043832 (Bacillus sp. BS98 plasmid unnamed2) position: , mismatch: 9, identity: 0.735

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
aacataaatttttaaaaaattttctacatcccag	Protospacer
  *******.*************.** * .*.*.

125. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
taatatatattgtaaaaataatttttatctaaa	Protospacer
 .****************** *** ***.

126. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
taatatatattgtaaaaataatttttatctaaa	Protospacer
 .****************** *** ***.

127. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
taatatatattgtaaaaataatttttatctaaa	Protospacer
 .****************** *** ***.

128. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
taatatatattgtaaaaataatttttatctaaa	Protospacer
 .****************** *** ***.

129. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
taatatatattgtaaaaataatttttatctaaa	Protospacer
 .****************** *** ***.

130. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
taatatatattgtaaaaataatttttatctaaa	Protospacer
 .****************** *** ***.

131. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_008012 (Lawsonia intracellularis PHE/MN1-00 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
agatatatattgaagaaatattttcattaagac	Protospacer
************ *.*********   * .  *

132. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_020128 (Lawsonia intracellularis N343 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
agatatatattgaagaaatattttcattaagac	Protospacer
************ *.*********   * .  *

133. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031139 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete sequence) position: , mismatch: 9, identity: 0.727

agatatatattgtaaaaatattttatattgctc	CRISPR spacer
aaatatatatagtaaaaatatttaattgtcaaa	Protospacer
*.******** ************ **  *

134. spacer 2.46|567784|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MT939487 (Erwinia phage pEa_SNUABM_47, complete genome) position: , mismatch: 9, identity: 0.735

accgcaa----caaaccatgaaacccataaacaatacg	CRISPR spacer
----caaacctcaaaacatgaaaccaataaacaatcat	Protospacer
    ***    **** ********* *********

135. spacer 2.46|567784|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MT939486 (Erwinia phage pEa_SNUABM_12, complete genome) position: , mismatch: 9, identity: 0.735

accgcaa----caaaccatgaaacccataaacaatacg	CRISPR spacer
----caaacctcaaaacatgaaaccaataaacaatcat	Protospacer
    ***    **** ********* *********

136. spacer 2.46|567784|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_041917 (Serratia phage BF, complete genome) position: , mismatch: 9, identity: 0.735

accgcaa----caaaccatgaaacccataaacaatacg	CRISPR spacer
----caaacctcaaaacatgaaaccaataaacaatcat	Protospacer
    ***    **** ********* *********

137. spacer 2.46|567784|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MT939488 (Erwinia phage pEa_SNUABM_50, complete genome) position: , mismatch: 9, identity: 0.735

accgcaa----caaaccatgaaacccataaacaatacg	CRISPR spacer
----caaacctcaaaacatgaaaccaataaacaatcat	Protospacer
    ***    **** ********* *********

138. spacer 6.15|2000313|35|NC_008346|PILER-CR,CRISPRCasFinder,CRT matches to MT774389 (CrAssphage cr116_1, complete genome) position: , mismatch: 9, identity: 0.743

ttcatcaaatattatctaataaagaattaataaag	CRISPR spacer
ttagcatagtattaactaataaagaattaacaaat	Protospacer
** ..  *.***** ***************.***

139. spacer 9.31|2858143|36|NC_008346|CRISPRCasFinder,CRT matches to NZ_LR699118 (Aquicella lusitana strain SGT-39 plasmid 5) position: , mismatch: 9, identity: 0.75

tgtcgaatatattatgtaataatatattacatagta	CRISPR spacer
tattaattatattatataataatatattatataaat	Protospacer
*.*..* ********.*************.***.

140. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP018877 (Bacillus megaterium strain JX285 plasmid 4, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
agaaataaaaaaataaattttaaacaaattataa	Protospacer
 .******************** * ***  * ..

141. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP048054 (Piscirickettsia salmonis strain Ps-11091B plasmid Ps11091B-p2, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
atatgtaaaaaaataaattttaaaaaaaatacac	Protospacer
  * .***************** ****** * .

142. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to CP003185 (Thermoanaerobacterium saccharolyticum JW/SL-YS485 plasmid pMU3262, complete genome) position: , mismatch: 9, identity: 0.735

taaaataa-aaaaataaattttataaaaaagaagg	CRISPR spacer
-agcttgataaaaataaattatataacaaagaaaa	Protospacer
 *.  *.* *********** ***** ******..

143. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_019956 (Thermoanaerobacterium thermosaccharolyticum M0795 plasmid pTHETHE01, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataa-aaaaataaattttataaaaaagaagg	CRISPR spacer
-agcttgataaaaataaattatataacaaagaaaa	Protospacer
 *.  *.* *********** ***** ******..

144. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaacagataaattttatatatattcata	Protospacer
********* *.************ * *   * .

145. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
tttgataaagaaataacttttataaaaaacgaaa	Protospacer
*  .*****.****** ************ .*..

146. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to MT119360 (Enterococcus phage nattely, complete genome) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ccgtatttaaaaataaattatataaacaagaagt	Protospacer
. . **  *********** ****** ******

147. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaacagataaattttatatatattcata	Protospacer
********* *.************ * *   * .

148. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_015917 (Borreliella bissettii DN127 plasmid lp28-4, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ataaataaaaaaattaattttttaaagtataaaa	Protospacer
  ************ ****** ****. * **..

149. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
atctataaaaaactaaatgttataaaaacgtatg	Protospacer
    ******** ***** ********* * * *

150. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP034685 (Bacillus sp. BD59S plasmid pBTBD59S2, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
tacatagtaaaattaaattttataaaaatgaaaa	Protospacer
** *  . **** *************** ***..

151. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to CP002030 (Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence) position: , mismatch: 9, identity: 0.735

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaaaaaataaagtatatacatattacat	Protospacer
***************** * **** * *  * .

152. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to AP013556 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S32-C64, *** SEQUENCING IN PROGRESS ***, 6 ordered pieces) position: , mismatch: 9, identity: 0.743

aaagaagaagataaaaatactattaaattaagtga	CRISPR spacer
acagaagaagatataaatactattgaatggcacaa	Protospacer
* *********** **********.*** . ...*

153. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to NZ_AP018256 (Calothrix sp. NIES-4071 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.743

aaagaagaagataaaaatactattaaattaagtga	CRISPR spacer
aaagaaaaagataaaattactattaatgcaacatt	Protospacer
******.********* *********  .**

154. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to AP013557 (Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C28-MedDCM-OCT-S41-C64, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 9, identity: 0.743

aaagaagaagataaaaatactattaaattaagtga	CRISPR spacer
acagaagaagatataaatactattgaatggcacaa	Protospacer
* *********** **********.*** . ...*

155. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to AP014411 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S42-C174, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 9, identity: 0.743

aaagaagaagataaaaatactattaaattaagtga	CRISPR spacer
acagaagaagatataaatactattgaatggcacaa	Protospacer
* *********** **********.*** . ...*

156. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to AP013641 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28B-MedDCM-OCT-S36-C223, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.743

aaagaagaagataaaaatactattaaattaagtga	CRISPR spacer
acagaagaagatataaatactattgaatggcacaa	Protospacer
* *********** **********.*** . ...*

157. spacer 9.113|2863554|35|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 9, identity: 0.743

cacgattttagtgcggcaaatagcgcagcacaggg	CRISPR spacer
ggcgtagcttgtgcggaaaacagcgcagcacaggg	Protospacer
 .**   .* ****** ***.**************

158. spacer 9.115|2863685|37|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 9, identity: 0.757

cgcacatctgctggcgggtcaggttatcgtggagatt	CRISPR spacer
cgatcgcaaggtggcgggtcaggatctcgtggagatt	Protospacer
**  *..  * ************ * ***********

159. spacer 9.150|2865995|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_048682 (Raoultella phage Ro1, complete genome) position: , mismatch: 9, identity: 0.743

aaaaagccgggggcaattccccggcttcaactact	CRISPR spacer
gttatgccggggacaattccccggctttaatcagt	Protospacer
.  * *******.**************.**..* *

160. spacer 9.150|2865995|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_048647 (UNVERIFIED: Klebsiella phage KNP2 genomic sequence) position: , mismatch: 9, identity: 0.743

aaaaagccgggggcaattccccggcttcaactact	CRISPR spacer
gttatgccggggacaattccccggctttaatcagt	Protospacer
.  * *******.**************.**..* *

161. spacer 9.150|2865995|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MT939253 (Klebsiella phage vB_KpnM_Seu621, complete genome) position: , mismatch: 9, identity: 0.743

aaaaagccgggggcaattccccggcttcaactact	CRISPR spacer
gttatgccggggacaattccccggctttaatcagt	Protospacer
.  * *******.**************.**..* *

162. spacer 9.150|2865995|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to KX452695 (UNVERIFIED: Klebsiella phage KPN2 genomic sequence) position: , mismatch: 9, identity: 0.743

aaaaagccgggggcaattccccggcttcaactact	CRISPR spacer
gttatgccggggacaattccccggctttaatcagt	Protospacer
.  * *******.**************.**..* *

163. spacer 9.150|2865995|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_048656 (Klebsiella phage vB_KpnM_BIS47, complete genome) position: , mismatch: 9, identity: 0.743

aaaaagccgggggcaattccccggcttcaactact	CRISPR spacer
gttatgccggggacaattccccggctttaatcagt	Protospacer
.  * *******.**************.**..* *

164. spacer 9.150|2865995|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_028659 (Klebsiella phage vB_KpnM_KB57, complete genome) position: , mismatch: 9, identity: 0.743

aaaaagccgggggcaattccccggcttcaactact	CRISPR spacer
gttatgccggggacaattccccggctttaatcagt	Protospacer
.  * *******.**************.**..* *

165. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MN693542 (Marine virus AFVG_25M165, complete genome) position: , mismatch: 10, identity: 0.706

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
tctagaaagttttaaaaaattttttaaaaaaagt	Protospacer
*..* *** .*******************   .

166. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to AP013777 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C94-MedDCM-OCT-S24-C128, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.706

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
aaaaaaaatatttaaataattttttaaaagaaac	Protospacer
   * **** ****** ************   *

167. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012476 (Bacillus clausii strain ENTPro plasmid, complete sequence) position: , mismatch: 10, identity: 0.706

cttcaaacattgttatacctccttgttaatatcc	CRISPR spacer
cttcaaacatttttatgcctccttacaaagcgat	Protospacer
*********** ****.*******.. **    .

168. spacer 2.24|566307|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 10, identity: 0.706

cttcaaacattgttatacctccttgttaatatcc	CRISPR spacer
tataagccattgttatacctcctagtttatagga	Protospacer
. * *. **************** *** ***

169. spacer 2.36|567114|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MH533020 (Acinetobacter phage ABPH49, complete genome) position: , mismatch: 10, identity: 0.706

aaggaggtaaataaataaatgataaataacagta	CRISPR spacer
ccggaggtaaagaaataaatgagaaaactgcgtg	Protospacer
  ********* ********** ***     **.

170. spacer 6.11|2000023|35|NC_008346|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033050 (Virgibacillus halodenitrificans strain Bac324 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

cctactcattgtcctgattgtggaagtaaattaag	CRISPR spacer
cctactcattgtcctgaatgtggtagccctcttga	Protospacer
***************** ***** **.   .* ..

171. spacer 6.11|2000023|35|NC_008346|PILER-CR,CRISPRCasFinder,CRT matches to NC_021803 (Cellulophaga phage phi13:2, complete genome) position: , mismatch: 10, identity: 0.714

cctactcattgtcctgattgtggaagtaaattaag	CRISPR spacer
ggttgggattgtcctgattgtggaattaatttacc	Protospacer
  *    ****************** *** ***

172. spacer 9.15|2857086|37|NC_008346|CRISPRCasFinder,CRT matches to KY612839 (Vibrio phage pVco-5, complete genome) position: , mismatch: 10, identity: 0.73

aaatgttagttaaaactataacagacgaaacaaatgg	CRISPR spacer
ttatgttagttaaaactatattagacgatttaaagta	Protospacer
  ****************** .******  .***  .

173. spacer 9.27|2857879|35|NC_008346|CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.714

----tgtaatcttattactataattattaaatattcttt	CRISPR spacer
aggtcacagt----ttactataattatgaaatattcatt	Protospacer
    ...*.*    ************* ******** **

174. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_020292 (Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p, complete sequence) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaaaaaataaactatataatttcttacc	Protospacer
*****************.* *****      *

175. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_LR214954 (Mycoplasma neurolyticum strain NCTC10166 plasmid 4) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
taaaataaaaaaataaatttattaattagttgct	Protospacer
********************  ***  *.  .

176. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP009061 (Borreliella afzelii K78 plasmid lp17, complete sequence) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aaaaataaaaaaatatatttaataagactaatat	Protospacer
 ************** **** ****.*  .* .

177. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
agaggtgtaaaaatgaattttttaaaaaagaata	Protospacer
 .*..*. ******.****** ********** .

178. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP017876 (Campylobacter coli strain ZV1224 plasmid pCCDM224S, complete sequence) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaa-----aagaagg	CRISPR spacer
agtaataaaaaaataaatattattaaattcttaa-----	Protospacer
 . *************** **** ***     **

179. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to CP013736 (Campylobacter coli strain OR12 plasmid pOR12CC42, complete sequence) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaa-----aagaagg	CRISPR spacer
agtaataaaaaaataaatattattaaattcttaa-----	Protospacer
 . *************** **** ***     **

180. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP016898 (Acinetobacter soli strain GFJ2 plasmid pGFJ2, complete sequence) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
gaatgctccaaaataaaattgataaaaaagaaga	Protospacer
 ** ..   ******** ** ************.

181. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NC_017232 (Borreliella afzelii PKo plasmid lp17, complete sequence) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aaaaataaaaaaatatatttaataagactaatat	Protospacer
 ************** **** ****.*  .* .

182. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_MH634990 (Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence) position: , mismatch: 10, identity: 0.706

taaaataaaaaaataaattttataaaa-----aagaagg	CRISPR spacer
agtaataaaaaaataaatattattaaattcttaa-----	Protospacer
 . *************** **** ***     **

183. spacer 9.37|2858537|36|NC_008346|CRISPRCasFinder,CRT matches to NC_010480 (Synechococcus sp. PCC 7002 plasmid pAQ6, complete sequence) position: , mismatch: 10, identity: 0.722

gacacaaaaaggtgtcgaggcgaaaggagtcgatgg	CRISPR spacer
gtttacaaaaggtgtcgaggctaatggagtcgtcag	Protospacer
* .   *************** ** ******* ..*

184. spacer 9.37|2858537|36|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP016482 (Synechococcus sp. PCC 7117 plasmid unnamed5, complete sequence) position: , mismatch: 10, identity: 0.722

gacacaaaaaggtgtcgaggcgaaaggagtcgatgg	CRISPR spacer
gtttacaaaaggtgtcgaggctaagggagtcgtcag	Protospacer
* .   *************** **.******* ..*

185. spacer 9.81|2861443|34|NC_008346|CRISPRCasFinder,CRT matches to NC_019364 (Sulfitobacter guttiformis plasmid pSD118, complete sequence) position: , mismatch: 10, identity: 0.706

ttgatgatgaaccgatatggattacgttgaatcc---	CRISPR spacer
agcatgaagtaccgatatggattacgtc---tctggg	Protospacer
   **** * *****************.   **.

186. spacer 9.104|2862964|35|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP031163 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence) position: , mismatch: 10, identity: 0.714

taccggtgtccagccggaaggcagcat-cggtgcgt	CRISPR spacer
gtcccgtgtccagcgggaaggcagcatgcagcaga-	Protospacer
  ** ********* ************ *.*.. .

187. spacer 9.164|2866915|39|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_048677 (Lactobacillus phage LpeD, complete genome) position: , mismatch: 10, identity: 0.744

gaaacggttatttggtttctattttaaatatttatccta	CRISPR spacer
gaggccgttaattgttttctattttaaatatttaaaaac	Protospacer
**..* **** *** *******************

188. spacer 9.167|2867116|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053834 (Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence) position: , mismatch: 10, identity: 0.714

tatagttctgttattttgttacctggaaggtattt	CRISPR spacer
tatggttctgttatttttttacctgttccatcata	Protospacer
***.************* *******    .*  *

189. spacer 2.19|565975|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to KJ019146 (Synechococcus phage ACG-2014f isolate Syn7803C16, complete genome) position: , mismatch: 11, identity: 0.676

tttgtcataatcatccatcaggtgatacaatgcc	CRISPR spacer
aaagtcagaaccatccatcaggtgataaccctca	Protospacer
   **** **.****************   . *

190. spacer 2.19|565975|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to KJ019151 (Synechococcus phage ACG-2014f isolate Syn7803C24, complete genome) position: , mismatch: 11, identity: 0.676

tttgtcataatcatccatcaggtgatacaatgcc	CRISPR spacer
aaagtcagaaccatccatcaggtgataaccctca	Protospacer
   **** **.****************   . *

191. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034874 (Buchnera aphidicola (Hyadaphis tataricae) strain Hta plasmid pLeu, complete sequence) position: , mismatch: 11, identity: 0.676

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
gaatcaaatatttaaaaatttttttaaaaaaaat	Protospacer
    .**** ******** **********   *

192. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_014749 (Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence) position: , mismatch: 11, identity: 0.676

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
aatactcatctttaaaatattttttaaactcatt	Protospacer
  .*.  ********** ********** **

193. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044174 (Campylobacter jejuni strain AR-0412 plasmid pAR-0412, complete sequence) position: , mismatch: 11, identity: 0.676

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
agttttgctctttaaaaacttttttaaattcttc	Protospacer
  . * . ********** ********* ***

194. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MN693152 (Marine virus AFVG_25M11, complete genome) position: , mismatch: 11, identity: 0.676

ttcataaatctttaaaaaattttttaaaatctaa----	CRISPR spacer
----tacttttttaaaaaattttttaaaactttctaga	Protospacer
    **  *.*******************..*

195. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to KX156762 (Staphylococcus phage vB_SauS_IMEP5, complete genome) position: , mismatch: 11, identity: 0.676

ttcataaatctttaaaaaattttttaaaatctaa	CRISPR spacer
acaggaattatttaaaaaattttttaaaagaaac	Protospacer
 . . ** * *******************   *

196. spacer 2.34|566978|35|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019901 (Raoultella planticola strain GODA plasmid unnamed2) position: , mismatch: 11, identity: 0.686

cttttgccaattcaattttaagctggccggacata	CRISPR spacer
cttttgccaattcaatctcaagctgttcattatcg	Protospacer
****************.*.****** .*.    ..

197. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to LR214964 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 10) position: , mismatch: 11, identity: 0.676

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
aaaaataaaaaaataaatgttattaatgttgcaa	Protospacer
 ***************** **** ** .  . ..

198. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 11, identity: 0.676

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
atttattaaaaactaaattttataaaaaaattaa	Protospacer
    ** ***** ****************.  ..

199. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP024244 (Escherichia coli O128:H27 strain 90-9281 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttttataaaaatataaatttcataaaaatagtac	Protospacer
*   ******* ********.******* .. .

200. spacer 9.35|2858406|34|NC_008346|CRISPRCasFinder,CRT matches to NZ_CP025850 (Escherichia coli strain 600468 plasmid p600468_158, complete sequence) position: , mismatch: 11, identity: 0.676

taaaataaaaaaataaattttataaaaaagaagg	CRISPR spacer
ttttataaaaatataaatttcataaaaatagtac	Protospacer
*   ******* ********.******* .. .

201. spacer 9.50|2859394|35|NC_008346|CRISPRCasFinder,CRT matches to MH593836 (Inoviridae sp. isolate ctbh10, complete genome) position: , mismatch: 11, identity: 0.686

aaagaagaagataaaaatactattaaattaagtga	CRISPR spacer
gtaaaagtagataaaaatattattaaatttttcat	Protospacer
. *.*** ***********.*********   ..

202. spacer 9.60|2860058|37|NC_008346|CRISPRCasFinder,CRT matches to MN694678 (Marine virus AFVG_250M509, complete genome) position: , mismatch: 11, identity: 0.703

atagatgaagaaggaatgaaagaagtatacaaatggt	CRISPR spacer
gttaatgaagaaggagagaaagaagtatacctagaac	Protospacer
.* .***********. *************  * ...

203. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NC_042140 (Bacillus virus BM15, complete genome) position: , mismatch: 12, identity: 0.647

ttcataaatctttaaaaaattttttaaaatctaa----	CRISPR spacer
----atagccgttaaaaaattttttaaaaagttattga	Protospacer
      *..* ******************  * *

204. spacer 2.23|566241|34|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to MH638309 (Bacillus phage Hobo, complete genome) position: , mismatch: 12, identity: 0.647

ttcataaatctttaaaaaattttttaaaatctaa----	CRISPR spacer
----atagccgttaaaaaattttttaaaaagttattga	Protospacer
      *..* ******************  * *

205. spacer 9.91|2862103|36|NC_008346|CRISPRCasFinder,CRT matches to GQ478088 (Enterococcus phage phiFL4A, complete genome) position: , mismatch: 12, identity: 0.667

ccgggctagacccggaaaggaggaatttaaaatgag	CRISPR spacer
taaataataacacggaaagtaggaatttaaaatgaa	Protospacer
. ..    .** ******* ***************.

206. spacer 9.91|2862103|36|NC_008346|CRISPRCasFinder,CRT matches to MN995824 (UNVERIFIED: Enterococcus phage EFP1, complete genome) position: , mismatch: 12, identity: 0.667

ccgggctagacccggaaaggaggaatttaaaatgag	CRISPR spacer
taaataataacacggaaagtaggaatttaaaatgaa	Protospacer
. ..    .** ******* ***************.

207. spacer 9.91|2862103|36|NC_008346|CRISPRCasFinder,CRT matches to MT747435 (Enterococcus phage AE4_2, complete genome) position: , mismatch: 12, identity: 0.667

ccgggctagacccggaaaggaggaatttaaaatgag	CRISPR spacer
taaataataacacggaaagtaggaatttaaaatgaa	Protospacer
. ..    .** ******* ***************.

208. spacer 2.44|567652|33|NC_008346|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 13, identity: 0.606

--agatatatattgtaaaaatattttatattgctc	CRISPR spacer
ttaaatatatggtaaaaatatattatatgtaaa--	Protospacer
  *.******. *. *** ***** ***.* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

101734 : 179882

Pseudomonas_phage(22.22%)

transposase,protease,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011639562.1\|101734_103099_+\|tRNA	tRNA lysidine(34) synthetase TilS	M1I2W1	Paramecium_bursaria_Chlorella_virus	3.0e-13	28.1
WP_011639563.1\|103564_105364_+\|protease	ATP-dependent zinc metalloprotease FtsH	H8ZJI5	Ostreococcus_tauri_virus	1.2e-110	47.6
WP_011639564.1\|105538_106063_+	HD domain-containing protein	NA	NA	NA	NA
WP_011639565.1\|106251_107490_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	6.9e-25	31.7
WP_041427633.1\|107494_107854_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_011639567.1\|107908_108403_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_011639568.1\|108525_109422_+	DUF2520 domain-containing protein	NA	NA	NA	NA
WP_011639569.1\|109518_110349_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA
WP_011639570.1\|110510_111359_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_011639571.1\|111362_111719_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_011639572.1\|111758_112670_+	quinolinate synthase NadA	NA	NA	NA	NA
WP_011639573.1\|112790_114392_+	L-aspartate oxidase	NA	NA	NA	NA
WP_011639574.1\|114915_115746_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_011639575.1\|115821_116418_+	biotin transporter BioY	NA	NA	NA	NA
WP_011639576.1\|116518_117286_+	type III pantothenate kinase	NA	NA	NA	NA
WP_049750143.1\|117362_118358_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_011639578.1\|118747_119278_+	hypothetical protein	NA	NA	NA	NA
WP_011639579.1\|119530_120445_+	hypothetical protein	NA	NA	NA	NA
WP_011639580.1\|120437_121346_+	hypothetical protein	NA	NA	NA	NA
WP_011639581.1\|121570_122050_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_011639582.1\|122439_123921_+\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	8.6e-99	39.0
WP_011639583.1\|124104_125559_+	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	1.6e-129	50.5
WP_011639584.1\|125690_125984_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_041427637.1\|125976_126234_+	DNA helicase	NA	NA	NA	NA
WP_011639586.1\|126512_127499_+	hypothetical protein	NA	NA	NA	NA
WP_011639587.1\|127488_129531_-	hypothetical protein	NA	NA	NA	NA
WP_011639588.1\|129670_131161_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_011639589.1\|131268_132339_-	polysaccharide pyruvyl transferase CsaB	NA	NA	NA	NA
WP_041427238.1\|132591_133671_+	undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_011639591.1\|133864_135007_+	LCP family protein	NA	NA	NA	NA
WP_011639592.1\|135119_137843_+	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGH1	Paenibacillus_phage	2.6e-24	38.8
WP_011639593.1\|138175_140713_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_011639594.1\|140786_142694_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	2.4e-29	30.9
WP_041427643.1\|142719_143157_-	small multi-drug export protein	NA	NA	NA	NA
WP_011639596.1\|143769_147465_+	S8 family serine peptidase	NA	NA	NA	NA
WP_011639597.1\|147518_148562_-	zf-HC2 domain-containing protein	NA	NA	NA	NA
WP_041427239.1\|148551_149133_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_041427240.1\|149586_152025_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_162010591.1\|152195_153335_+	TolC family protein	NA	NA	NA	NA
WP_011639601.1\|153786_154245_+	hypothetical protein	NA	NA	NA	NA
WP_049750068.1\|154228_154423_+	hypothetical protein	NA	NA	NA	NA
WP_041427242.1\|154519_155278_+\|transposase	transposase	NA	NA	NA	NA
WP_041427243.1\|155402_155618_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_011639604.1\|156220_157441_-\|transposase	transposase	NA	NA	NA	NA
WP_011639605.1\|157625_159902_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_011639606.1\|159999_161118_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_011639607.1\|161867_164144_+	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_011639608.1\|164191_164581_+	hypothetical protein	NA	NA	NA	NA
WP_011639609.1\|164859_168912_+	hypothetical protein	NA	NA	NA	NA
WP_162010592.1\|169440_170094_+	HEPN domain-containing protein	NA	NA	NA	NA
WP_011639611.1\|170636_171968_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.1e-32	30.2
WP_041427246.1\|172666_173425_+\|transposase	transposase	NA	NA	NA	NA
WP_011639615.1\|174686_174998_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_041427248.1\|174987_175320_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_155814252.1\|175573_176590_-\|transposase	transposase	NA	NA	NA	NA
WP_011639620.1\|178655_179882_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.2e-53	52.7

DBSCAN-SWA_2

707471 : 717204

Acanthocystis_turfacea_Chlorella_virus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011640049.1\|707471_708203_+	SigB/SigF/SigG family RNA polymerase sigma factor	A0A0A0RV91	Bacillus_phage	1.8e-41	42.3
WP_011640050.1\|708423_709023_-	DUF4489 domain-containing protein	NA	NA	NA	NA
WP_011640051.1\|709468_710821_+	nucleotide sugar dehydrogenase	NA	NA	NA	NA
WP_011640052.1\|710867_711854_+	NAD-dependent epimerase/dehydratase family protein	M1I3H4	Acanthocystis_turfacea_Chlorella_virus	2.1e-24	26.9
WP_011640053.1\|711869_712796_+	GDP-L-fucose synthase	M4R1H4	Synechococcus_phage	3.8e-105	59.1
WP_011640054.1\|713061_713280_+	type II toxin-antitoxin system HicB family antitoxin	A0A0C5KMI2	ANMV-1_virus	9.2e-10	55.8
WP_011640055.1\|713276_713507_+	type II toxin-antitoxin system HicA family toxin	F0PIL1	Enterococcus_phage	1.9e-05	51.8
WP_011640056.1\|713597_714560_+	transferase	R4TPX3	Phaeocystis_globosa_virus	2.7e-16	27.7
WP_011640057.1\|714591_717204_-	calcium-translocating P-type ATPase, PMCA-type	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	3.1e-91	31.9

DBSCAN-SWA_3

783601 : 842440

Klosneuvirus(16.67%)

transposase,integrase,tRNA

attL 825163:825180|attR 849714:849731

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041427351.1\|783601_784918_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_011640116.1\|784886_785807_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_011640117.1\|786233_787751_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_011640118.1\|787773_788946_+	radical SAM protein	NA	NA	NA	NA
WP_011640119.1\|789371_790352_+	porphobilinogen synthase	NA	NA	NA	NA
WP_011640120.1\|790482_791484_+	putative heme d1 biosynthesis radical SAM protein NirJ2	NA	NA	NA	NA
WP_011640121.1\|791489_791960_+	AsnC family transcriptional regulator	NA	NA	NA	NA
WP_011640122.1\|791949_792420_+	AsnC family transcriptional regulator	NA	NA	NA	NA
WP_011640123.1\|792492_793788_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_011640124.1\|793872_794652_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_041427355.1\|794909_795662_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_011640126.1\|795701_796655_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_011640127.1\|796757_798902_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_155814120.1\|799310_799814_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.3e-27	44.1
WP_011640129.1\|800082_800499_-	hypothetical protein	NA	NA	NA	NA
WP_011640130.1\|800927_801458_+	transcriptional regulator	NA	NA	NA	NA
WP_041427358.1\|801525_801876_+	four helix bundle protein	NA	NA	NA	NA
WP_011640132.1\|801949_803134_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L470	Tupanvirus	5.5e-40	33.0
WP_011640133.1\|803413_803998_+	N-acetyltransferase	NA	NA	NA	NA
WP_011640134.1\|804077_805394_+	nucleotide sugar dehydrogenase	M1HKZ1	Paramecium_bursaria_Chlorella_virus	6.8e-39	29.3
WP_011640135.1\|805411_806407_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_011640136.1\|806667_807639_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	3.6e-37	32.6
WP_011640137.1\|807870_808959_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_011640138.1\|809115_810336_+\|transposase	transposase	NA	NA	NA	NA
WP_011640139.1\|810556_811570_+	NAD-dependent epimerase/dehydratase family protein	A0A1V0SKV4	Klosneuvirus	6.4e-37	35.1
WP_011640140.1\|811562_812729_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2D2W2B8	Stenotrophomonas_phage	9.1e-19	27.5
WP_011640141.1\|812731_814612_+	asparagine synthase (glutamine-hydrolyzing)	A0A0G2Y369	Acanthamoeba_polyphaga_mimivirus	9.8e-31	28.2
WP_155814121.1\|814625_814787_+	hypothetical protein	NA	NA	NA	NA
WP_081424771.1\|814837_815617_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_041427360.1\|815734_816778_+	hypothetical protein	NA	NA	NA	NA
WP_011640144.1\|816822_817788_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011640145.1\|817769_818654_+	DegT/DnrJ/EryC1/StrS aminotransferase family protein	NA	NA	NA	NA
WP_011640146.1\|818644_819526_+\|tRNA	methionyl-tRNA formyltransferase-like protein	NA	NA	NA	NA
WP_011639746.1\|819453_821100_+\|transposase	transposase	NA	NA	NA	NA
WP_162010596.1\|821209_821440_+	hypothetical protein	NA	NA	NA	NA
WP_162010597.1\|821522_821669_+	hypothetical protein	NA	NA	NA	NA
WP_011640148.1\|821904_823125_-\|transposase	transposase	NA	NA	NA	NA
WP_011640149.1\|823324_824890_+	hypothetical protein	NA	NA	NA	NA
WP_011640150.1\|825112_826405_+	polysaccharide biosynthesis C-terminal domain-containing protein	NA	NA	NA	NA
825163:825180	attL	NA	NA	NA	NA
WP_011640151.1\|826414_827707_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA
WP_011640152.1\|827791_829069_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011640153.1\|829675_830824_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_011640154.1\|830871_831885_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	2.3e-34	30.2
WP_155814123.1\|831922_832795_+	sugar nucleotide-binding protein	A0A167RG57	Powai_lake_megavirus	7.4e-34	34.4
WP_011640156.1\|832791_833919_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	2.6e-111	52.4
WP_011640157.1\|833942_834848_+	nucleoside-diphosphate-sugar epimerases-like protein	NA	NA	NA	NA
WP_011640158.1\|834844_836038_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_011640159.1\|836117_837239_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_011640160.1\|837267_837903_+	YdcF family protein	NA	NA	NA	NA
WP_011640161.1\|838619_839366_-	ATP-binding protein	NA	NA	NA	NA
WP_011640162.1\|839355_840225_-	hypothetical protein	K4I413	Acidithiobacillus_phage	1.2e-36	33.7
WP_011640163.1\|840379_841393_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.1e-15	30.4
WP_011640164.1\|841678_842440_+\|transposase	IS21 family transposase	NA	NA	NA	NA
849714:849731	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1939596 : 2011182

Pseudomonas_phage(12.5%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049750181.1\|1939596_1940559_+\|transposase	transposase	NA	NA	NA	NA
WP_011641102.1\|1941016_1941835_-	HesA/MoeB/ThiF family protein	NA	NA	NA	NA
WP_011641103.1\|1941893_1942118_-	MoaD/ThiS family protein	NA	NA	NA	NA
WP_011641104.1\|1942207_1942426_-	DUF3006 domain-containing protein	NA	NA	NA	NA
WP_011639756.1\|1942746_1944078_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.2e-32	30.0
WP_011641105.1\|1944552_1945725_-	MBL fold metallo-hydrolase	Q0H255	Geobacillus_phage	1.1e-59	43.7
WP_011641106.1\|1946084_1946684_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.1e-36	42.0
WP_011641107.1\|1946742_1948050_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_011641108.1\|1948201_1949380_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_011641109.1\|1949400_1951776_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_049750182.1\|1951775_1952435_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.6e-36	40.9
WP_011641111.1\|1952758_1955614_-	VWA domain-containing protein	NA	NA	NA	NA
WP_162010611.1\|1955603_1957427_-	BatA domain-containing protein	NA	NA	NA	NA
WP_049750122.1\|1957560_1958439_-	DUF58 domain-containing protein	NA	NA	NA	NA
WP_081424890.1\|1958937_1959852_-	AAA family ATPase	NA	NA	NA	NA
WP_049750123.1\|1960029_1960296_-	hypothetical protein	NA	NA	NA	NA
WP_155814187.1\|1960295_1960601_-	hypothetical protein	NA	NA	NA	NA
WP_011641116.1\|1960491_1961763_-	hypothetical protein	NA	NA	NA	NA
WP_011641117.1\|1961783_1962713_-	ABC transporter permease	NA	NA	NA	NA
WP_011641118.1\|1962712_1963639_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.2e-27	34.9
WP_011641119.1\|1963640_1966100_-	hypothetical protein	NA	NA	NA	NA
WP_011641120.1\|1966096_1967287_-	hypothetical protein	NA	NA	NA	NA
WP_011641121.1\|1968288_1968714_+	DUF2294 domain-containing protein	NA	NA	NA	NA
WP_041427964.1\|1968990_1970037_+	Zn-dependent alcohol dehydrogenase	NA	NA	NA	NA
WP_011641123.1\|1970541_1970835_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_011641124.1\|1970818_1971163_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_011641125.1\|1971190_1974862_-	AAA family ATPase	A0A1B1IUN1	uncultured_Mediterranean_phage	2.7e-08	27.0
WP_011641126.1\|1974874_1976101_-	exonuclease SbcCD subunit D C-terminal domain-containing protein	G9J1Y4	Bacillus_phage	9.9e-08	33.3
WP_011641127.1\|1976131_1977625_-	S41 family peptidase	NA	NA	NA	NA
WP_041427497.1\|1977680_1978544_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_041427498.1\|1978826_1979543_+	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
WP_011641130.1\|1979715_1981011_-	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_011641131.1\|1981352_1982204_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_155814298.1\|1982210_1983113_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.8e-30	38.6
WP_155814188.1\|1983119_1984193_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_155814189.1\|1984925_1985126_+	hypothetical protein	NA	NA	NA	NA
WP_011641134.1\|1985107_1985695_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_041427501.1\|1988360_1989926_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_011641138.1\|1990103_1991327_-	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_011641139.1\|1991347_1992682_-	acetyl-CoA hydrolase/transferase	NA	NA	NA	NA
WP_011641140.1\|1993023_1994736_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_011641141.1\|1994951_1996193_-	hypothetical protein	NA	NA	NA	NA
WP_011639960.1\|1996473_1997694_-\|transposase	transposase	NA	NA	NA	NA
WP_011641142.1\|1997890_1998220_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_011641143.1\|1998216_1999227_-	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_011641144.1\|2000509_2001787_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011641145.1\|2002711_2003461_-	CRISPR-associated endoribonuclease Cas6	NA	NA	NA	NA
WP_011641146.1\|2003611_2004754_-	type III-A CRISPR-associated RAMP protein Csm5	NA	NA	NA	NA
WP_011641147.1\|2004750_2005698_-	type III-A CRISPR-associated RAMP protein Csm4	NA	NA	NA	NA
WP_041427503.1\|2005672_2006368_-	type III-A CRISPR-associated RAMP protein Csm3	NA	NA	NA	NA
WP_011641149.1\|2006387_2006864_-	type III-A CRISPR-associated protein Csm2	NA	NA	NA	NA
WP_011641150.1\|2006856_2009283_-	type III-A CRISPR-associated protein Cas10/Csm1	NA	NA	NA	NA
WP_011639746.1\|2009535_2011182_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2027459 : 2034154

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011641168.1\|2027459_2028980_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.4e-82	54.3
WP_011641169.1\|2028987_2029629_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.9e-23	35.1
WP_011641170.1\|2029625_2030663_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FC27	Synechococcus_phage	5.9e-62	39.9
WP_081424834.1\|2030723_2032169_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.2e-59	35.8
WP_011641172.1\|2032295_2033600_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	4.5e-19	32.7
WP_011641173.1\|2033638_2034154_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.0e-23	44.5

DBSCAN-SWA_6

2531307 : 2549774

Leptospira_phage(80.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011641574.1\|2531307_2532069_-\|transposase	transposase	NA	NA	NA	NA
WP_011641575.1\|2532174_2532495_-	TIGR04076 family protein	NA	NA	NA	NA
WP_011641576.1\|2532729_2533056_-	hypothetical protein	NA	NA	NA	NA
WP_081424898.1\|2533644_2534046_-	HNH endonuclease	NA	NA	NA	NA
WP_011641580.1\|2535090_2535852_-\|transposase	transposase	NA	NA	NA	NA
WP_081424853.1\|2536128_2536284_-	hypothetical protein	NA	NA	NA	NA
WP_041427560.1\|2536723_2536930_-	hypothetical protein	NA	NA	NA	NA
WP_011641583.1\|2539292_2539604_+\|transposase	transposase	NA	NA	NA	NA
WP_011641584.1\|2539600_2539954_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.5e-22	47.2
WP_011641585.1\|2540031_2541624_+\|transposase	IS66-like element ISSwo2 family transposase	S5VTD3	Leptospira_phage	1.2e-69	34.6
WP_011639493.1\|2542162_2542885_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.1e-33	38.2
WP_011641587.1\|2543090_2543528_-	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_041427562.1\|2543517_2543697_-	hypothetical protein	NA	NA	NA	NA
WP_041428061.1\|2544044_2545823_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_011641589.1\|2545826_2547125_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_011641583.1\|2547442_2547754_+\|transposase	transposase	NA	NA	NA	NA
WP_011641584.1\|2547750_2548104_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.5e-22	47.2
WP_011641585.1\|2548181_2549774_+\|transposase	IS66-like element ISSwo2 family transposase	S5VTD3	Leptospira_phage	1.2e-69	34.6

DBSCAN-SWA_7

2553592 : 2615485

Bacillus_phage(15.38%)

transposase,bacteriocin,integrase

attL 2592660:2592712|attR 2618758:2618810

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011639494.1\|2553592_2555098_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_011639493.1\|2555094_2555817_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.1e-33	38.2
WP_011641597.1\|2556708_2558250_-	hypothetical protein	NA	NA	NA	NA
WP_155814312.1\|2559596_2561705_-	hypothetical protein	NA	NA	NA	NA
WP_011641601.1\|2562287_2563547_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	1.5e-51	32.1
WP_011641602.1\|2563836_2565306_+	metallophosphatase family protein	NA	NA	NA	NA
WP_011641603.1\|2565289_2565562_+	hypothetical protein	NA	NA	NA	NA
WP_081424855.1\|2565574_2566249_+	ABC transporter permease	NA	NA	NA	NA
WP_011641605.1\|2566692_2567202_+	hypothetical protein	NA	NA	NA	NA
WP_011641606.1\|2567212_2569360_+\|bacteriocin	NHLP family bacteriocin export ABC transporter peptidase/permease/ATPase subunit	W8CYL7	Bacillus_phage	8.8e-28	26.4
WP_011641607.1\|2569371_2571591_+\|bacteriocin	NHLP bacteriocin export ABC transporter permease/ATPase subunit	W8CYL7	Bacillus_phage	4.0e-23	26.5
WP_041427566.1\|2571720_2571945_+	hypothetical protein	NA	NA	NA	NA
WP_041427567.1\|2572076_2572283_+	hypothetical protein	NA	NA	NA	NA
WP_041427568.1\|2572450_2572684_+	hypothetical protein	NA	NA	NA	NA
WP_011641608.1\|2572909_2573353_-	DUF2087 domain-containing protein	NA	NA	NA	NA
WP_011641609.1\|2573334_2573499_-	hypothetical protein	NA	NA	NA	NA
WP_011641610.1\|2573677_2574616_-	2-ketoacid ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_011641611.1\|2574657_2575788_-	2-oxoisovalerate:ferredoxin oxidoreductase subunit alpha	NA	NA	NA	NA
WP_011641612.1\|2575792_2576050_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_011641613.1\|2576183_2576741_-	2-oxoacid:acceptor oxidoreductase family protein	NA	NA	NA	NA
WP_011641140.1\|2577632_2579345_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_011641614.1\|2579755_2580586_+	hypothetical protein	NA	NA	NA	NA
WP_041427570.1\|2580631_2581921_+	MFS transporter	NA	NA	NA	NA
WP_011641616.1\|2582136_2582454_-	YbjQ family protein	NA	NA	NA	NA
WP_011641617.1\|2582479_2583271_-	ABC transporter permease	NA	NA	NA	NA
WP_011641618.1\|2583267_2584149_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-20	29.8
WP_011641619.1\|2584150_2584543_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_041427571.1\|2584722_2585487_-	NRDE family protein	A0A068EEH0	Pigeonpox_virus	2.0e-38	37.4
WP_011641621.1\|2585727_2586069_+	hypothetical protein	NA	NA	NA	NA
WP_162010618.1\|2586387_2586525_+	hypothetical protein	NA	NA	NA	NA
WP_011641622.1\|2587921_2588431_-	hypothetical protein	NA	NA	NA	NA
WP_041427575.1\|2588435_2589584_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_041427577.1\|2589995_2590280_+	hypothetical protein	NA	NA	NA	NA
WP_011641624.1\|2590292_2590634_+	hypothetical protein	NA	NA	NA	NA
WP_011641625.1\|2590630_2591131_+	hypothetical protein	NA	NA	NA	NA
WP_011641627.1\|2591596_2592514_+\|integrase	site-specific integrase	A0A0A8WIE1	Clostridium_phage	6.0e-26	34.0
2592660:2592712	attL	NA	NA	NA	NA
WP_011641628.1\|2592893_2595365_-	S8 family peptidase	NA	NA	NA	NA
WP_011641629.1\|2595371_2596337_-	AAA family ATPase	E5EQU5	Bathycoccus_sp._RCC1105_virus	1.0e-15	30.8
WP_011641630.1\|2596473_2597157_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_011641631.1\|2597162_2600348_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	8.1e-62	26.5
WP_011641632.1\|2600347_2601589_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_011641633.1\|2601585_2604261_-	type I restriction-modification system subunit M	A0A220A2U4	Liberibacter_phage	1.6e-74	34.2
WP_049750192.1\|2604484_2604883_-	DUF1232 domain-containing protein	NA	NA	NA	NA
WP_155814234.1\|2605517_2605769_+	hypothetical protein	NA	NA	NA	NA
WP_011641635.1\|2605962_2608731_-	toprim domain-containing protein	NA	NA	NA	NA
WP_011641636.1\|2609017_2610265_-	hypothetical protein	NA	NA	NA	NA
WP_155814235.1\|2610390_2611032_+	DNA repair protein RadC	NA	NA	NA	NA
WP_011641638.1\|2611300_2612233_+	YqaJ viral recombinase family protein	A6XMH8	Bacillus_virus	2.5e-72	45.2
WP_011641639.1\|2612250_2613057_+	hypothetical protein	A6M982	Geobacillus_virus	9.6e-28	44.4
WP_011641640.1\|2613133_2613925_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_041427578.1\|2614058_2614307_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011641642.1\|2614306_2615485_+\|integrase	site-specific integrase	A0A2R2ZGM9	Clostridioides_phage	9.1e-43	30.1
2618758:2618810	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2789955 : 2855393

Escherichia_phage(14.29%)

transposase,protease,integrase,tRNA

attL 2838937:2838956|attR 2865267:2865286

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011641832.1\|2789955_2791725_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	6.5e-186	58.1
WP_011641833.1\|2791876_2792173_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_041427604.1\|2792182_2792440_-	hypothetical protein	NA	NA	NA	NA
WP_011641835.1\|2792608_2793454_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_011639611.1\|2793871_2795203_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.1e-32	30.2
WP_153014644.1\|2795729_2795870_-	thioredoxin	NA	NA	NA	NA
WP_011641836.1\|2795999_2796314_-	YbjQ family protein	NA	NA	NA	NA
WP_011639960.1\|2796538_2797759_-\|transposase	transposase	NA	NA	NA	NA
WP_011641837.1\|2798073_2798811_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_011641838.1\|2798879_2799359_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_011641839.1\|2799640_2799979_+	Ig-like domain-containing protein	NA	NA	NA	NA
WP_011641840.1\|2800078_2801338_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_011641841.1\|2801355_2802195_-	hypothetical protein	NA	NA	NA	NA
WP_011641842.1\|2802265_2803174_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	4.4e-61	44.3
WP_011641843.1\|2803235_2804576_-	peptidoglycan DD-metalloendopeptidase family protein	V5R8R0	Arthrobacter_phage	1.0e-18	52.7
WP_155814240.1\|2804787_2806203_-	thioether cross-link-forming SCIFF peptide maturase	NA	NA	NA	NA
WP_081424864.1\|2806235_2806379_-	six-cysteine ranthipeptide SCIFF	NA	NA	NA	NA
WP_081424865.1\|2806530_2806797_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_162010620.1\|2806806_2807241_-	PIN domain-containing protein	NA	NA	NA	NA
WP_041427605.1\|2807224_2807473_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_011641847.1\|2808533_2809628_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011641848.1\|2809737_2811432_+	iron ABC transporter permease	NA	NA	NA	NA
WP_011641849.1\|2811407_2812463_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.5e-24	35.8
WP_155814320.1\|2812765_2813764_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_081424866.1\|2813750_2815574_+	iron ABC transporter permease	NA	NA	NA	NA
WP_011641852.1\|2815563_2816541_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.4e-25	35.7
WP_011641853.1\|2816654_2817293_+	PHP domain-containing protein	NA	NA	NA	NA
WP_011641854.1\|2817594_2819454_+	PAS domain S-box protein	NA	NA	NA	NA
WP_011641855.1\|2819643_2820384_-	hypothetical protein	NA	NA	NA	NA
WP_011641856.1\|2820640_2821369_-	hypothetical protein	NA	NA	NA	NA
WP_155814242.1\|2821347_2821506_-	hypothetical protein	NA	NA	NA	NA
WP_011641857.1\|2821538_2822651_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_041427607.1\|2822678_2823539_-	Ig-like domain-containing protein	NA	NA	NA	NA
WP_011641859.1\|2823943_2825980_-\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_011641860.1\|2826043_2828665_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_041427609.1\|2828781_2828985_-	hypothetical protein	NA	NA	NA	NA
WP_011641862.1\|2829086_2829407_-	hypothetical protein	NA	NA	NA	NA
WP_011641864.1\|2830119_2833671_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	A0A2R2ZGH5	Clostridioides_phage	1.2e-05	19.6
WP_011641865.1\|2833708_2837266_-	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_011641866.1\|2837395_2837962_-	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_011641867.1\|2837978_2838578_-	DUF1819 family protein	NA	NA	NA	NA
2838937:2838956	attL	NA	NA	NA	NA
WP_011641868.1\|2839252_2839498_+	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_011641869.1\|2839499_2842103_+	S9 family peptidase	NA	NA	NA	NA
WP_011641871.1\|2842853_2846909_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_011641872.1\|2847151_2849683_-	hypothetical protein	NA	NA	NA	NA
WP_011639960.1\|2850682_2851903_-\|transposase	transposase	NA	NA	NA	NA
WP_011641873.1\|2852028_2852391_-	hypothetical protein	NA	NA	NA	NA
WP_155814243.1\|2852440_2852614_-	hypothetical protein	NA	NA	NA	NA
WP_041428125.1\|2852721_2853084_-	DUF5615 family PIN-like protein	NA	NA	NA	NA
WP_011641875.1\|2853088_2853307_-	DUF433 domain-containing protein	NA	NA	NA	NA
WP_011641876.1\|2853486_2853705_-	hypothetical protein	NA	NA	NA	NA
WP_011641877.1\|2853915_2854158_+	hypothetical protein	NA	NA	NA	NA
WP_041427611.1\|2854489_2854708_-	hypothetical protein	NA	NA	NA	NA
WP_011641878.1\|2854787_2855042_-\|transposase	transposase	NA	NA	NA	NA
WP_011641879.1\|2855054_2855393_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
2865267:2865286	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_008346

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection