CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_008347	Maricaulis maris MCS10, complete sequence	1 crisprs	WYL,csa3,cas3,DEDDh	0	0	4	0

1. NC_008347

CRISPR-Cas detection and classification

Crispr_ID: NC_008347_1

• CRISPR_ID: NC_008347_1
• CRISPR_location: 1971961-1972061
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_008347_1

Consensus_repeat	Method
ATTTTCGAGACGACGCCGGCGCCG	CRISPRCasFinder

spacers of NC_008347_1

>1.1|1971985|53|NC_008347|CRISPRCasFinder
CCCGTTCTGGTTGACGGTTGGGCCGGCCGGTTTGTCTCAAAGACTATTCAATA

CRISPR arrays and Neighbor proteins around NC_008347_1

CRISPR arrays

The CRISPR arrays of NC_008347_1

>merge|NC_008347|1|1971961-1972061|CRISPRCasFinder
ATTTTCGAGACGACGCCGGCGCCGCCCGTTCTGGTTGACGGTTGGGCCGGCCGGTTTGTCTCAAAGACTATTCAATAATCTTCGAGACGACGCCGGCGCCG

>NC_008347|1|1|1971961-1972061|CRISPRCasFinder
ATTTTCGAGACGACGCCGGCGCCG	CCCGTTCTGGTTGACGGTTGGGCCGGCCGGTTTGTCTCAAAGACTATTCAATA
ATCTTCGAGACGACGCCGGCGCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_008347.1|WP_011643758.1|1979611_1980010_-|RidA-family-protein	unknown	unknown	gnl|CDD|100011
NC_008347.1|WP_011643761.1|1982469_1983195_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|226663
NC_008347.1|WP_011643742.1|1959696_1960212_-|50S-ribosomal-protein-L10	unknown	unknown	gnl|CDD|234632
NC_008347.1|WP_011643744.1|1961217_1961646_-|50S-ribosomal-protein-L11	unknown	unknown	gnl|CDD|234661
NC_008347.1|WP_011643749.1|1967103_1968894_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|372711
NC_008347.1|WP_150099751.1|1975715_1976516_+|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	unknown	unknown	gnl|CDD|223640
NC_008347.1|WP_011643750.1|1968890_1971032_-|sulfotransferase-family-protein	unknown	unknown	gnl|CDD|379204
NC_008347.1|WP_011643759.1|1980014_1981376_-|amidohydrolase	unknown	unknown	gnl|CDD|349914
NC_008347.1|WP_049755704.1|1973631_1974669_-|GGDEF-domain-containing-protein	unknown	unknown	gnl|CDD|143635
NC_008347.1|WP_011643756.1|1977730_1978912_-|DUF819-family-protein	unknown	unknown	gnl|CDD|114410
NC_008347.1|WP_011643743.1|1960514_1961213_-|50S-ribosomal-protein-L1	unknown	unknown	gnl|CDD|180071
NC_008347.1|WP_041636901.1|1963966_1966822_-|TonB-dependent-receptor	unknown	unknown	gnl|CDD|238657
NC_008347.1|WP_011643745.1|1961744_1962278_-|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl|CDD|180161
NC_008347.1|WP_011643753.1|1974983_1975223_-|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl|CDD|198396
NC_008347.1|WP_011643746.1|1962289_1962547_-|preprotein-translocase-subunit-SecE	unknown	unknown	gnl|CDD|376355
NC_008347.1|WP_011643757.1|1978972_1979578_-|glutathione-S-transferase-family-protein	unknown	unknown	gnl|CDD|223698
NC_008347.1|WP_011643755.1|1976566_1977571_-|DUF2807-domain-containing-protein	unknown	unknown	gnl|CDD|371327
NC_008347.1|WP_011643751.1|1971028_1971793_-|2OG-Fe(II)-oxygenase	unknown	unknown	gnl|CDD|226274
NC_008347.1|WP_011643747.1|1962836_1963823_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_008347.1|WP_011643760.1|1981543_1982473_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_008347.1|WP_011643758.1|1979611_1980010_-|RidA-family-protein	gnl|CDD|100011	cd06154, YjgF_YER057c_UK114_like_6, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	4.57528e-59
NC_008347.1|WP_011643761.1|1982469_1983195_+|ABC-transporter-permease	gnl|CDD|226663	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown].	1.41439e-28
NC_008347.1|WP_011643742.1|1959696_1960212_-|50S-ribosomal-protein-L10	gnl|CDD|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	1.30817e-64
NC_008347.1|WP_011643744.1|1961217_1961646_-|50S-ribosomal-protein-L11	gnl|CDD|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	7.12325e-87
NC_008347.1|WP_011643749.1|1967103_1968894_-|tetratricopeptide-repeat-protein	gnl|CDD|372711	pfam13759, 2OG-FeII_Oxy_5, Putative 2OG-Fe(II) oxygenase. This family has structural similarity to the 2OG-Fe(II) oxygenase superfamily.	2.65642e-30
NC_008347.1|WP_150099751.1|1975715_1976516_+|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	gnl|CDD|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	6.91552e-62
NC_008347.1|WP_011643750.1|1968890_1971032_-|sulfotransferase-family-protein	gnl|CDD|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	1.35292e-34
NC_008347.1|WP_011643759.1|1980014_1981376_-|amidohydrolase	gnl|CDD|349914	cd05664, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, Uncharacterized subfamily of proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as in the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	2.22166e-162
NC_008347.1|WP_049755704.1|1973631_1974669_-|GGDEF-domain-containing-protein	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	5.10151e-60
NC_008347.1|WP_011643756.1|1977730_1978912_-|DUF819-family-protein	gnl|CDD|114410	pfam05684, DUF819, Protein of unknown function (DUF819). This family contains proteins of unknown function from archaeal, bacterial and plant species.	3.17444e-47
NC_008347.1|WP_011643743.1|1960514_1961213_-|50S-ribosomal-protein-L1	gnl|CDD|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.25304e-140
NC_008347.1|WP_041636901.1|1963966_1966822_-|TonB-dependent-receptor	gnl|CDD|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.11345e-21
NC_008347.1|WP_011643745.1|1961744_1962278_-|transcription-termination/antitermination-protein-NusG	gnl|CDD|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	6.86999e-91
NC_008347.1|WP_011643753.1|1974983_1975223_-|GIY-YIG-nuclease-family-protein	gnl|CDD|198396	cd10449, GIY-YIG_SLX1_like, Catalytic GIY-YIG domain of yeast structure-specific endonuclease subunit SLX1 and its homologs. Structure-specific endonuclease subunit SLX1 is a highly conserved protein from yeast to human, with an N-terminal GIY-YIG endonuclease domain and a C-terminal PHD-type zinc finger postulated to mediate protein-protein or protein-DNA interaction. SLX1 forms active heterodimeric complexes with its SLX4 partner, which has additional roles in the DNA damage response that are distinct from the function of the heterodimeric SLX1-SLX4 nuclease. In yeast, the SLX1-SLX4 complex functions as a 5' flap endonuclease that maintains ribosomal DNA copy number, where SLX1 and SLX4 are shown to be catalytic and regulatory subunits, respectively. This endonuclease introduces single-strand cuts in duplex DNA on the 3' side of junctions with single-strand DNA. In addition to 5' flap endonuclease activity, human SLX1-SLX4 complex has been identified as a Holliday junction resolvase that promotes symmetrical cleavage of static and migrating Holliday junctions. SLX1 also associates with MUS81, EME1, C20orf94, PLK1, and ERCC1. Some eukaryotic SLX1 homologs lack the zinc finger domain, but possess intrinsically unstructured extensions of unknown function. These unstructured segments might be involved in interactions with other proteins.	6.72015e-24
NC_008347.1|WP_011643746.1|1962289_1962547_-|preprotein-translocase-subunit-SecE	gnl|CDD|376355	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex. SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex.	2.20879e-15
NC_008347.1|WP_011643757.1|1978972_1979578_-|glutathione-S-transferase-family-protein	gnl|CDD|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	2.29863e-30
NC_008347.1|WP_011643755.1|1976566_1977571_-|DUF2807-domain-containing-protein	gnl|CDD|371327	pfam10988, DUF2807, Putative auto-transporter adhesin, head GIN domain. This bacterial family of proteins shows structural similarity to other pectin lyase families. Although structures from this family align with acetyl-transferases, there is no conservation of catalytic residues found. It is likely that the function is one of cell-adhesion. In Structure 3jx8, it is interesting to note that the sequence of contains several well defined sequence repeats, centred around GSG motifs defining the tight beta turn between the two sheets of the super-helix; there are 8 such repeats in the C-terminal half of the protein, which could be grouped into 4 repeats of two. It seems likely that this family belongs to the superfamily of trimeric auto-transporter adhesins (TAAs), which are important virulence factors in Gram-negative pathogens. In the case of Parabacteroides distasonis, which is a component of the normal distal human gut microbiota, TAA-like complexes probably modulate adherence to the host (information derived from TOPSAN).	3.08828e-06
NC_008347.1|WP_011643751.1|1971028_1971793_-|2OG-Fe(II)-oxygenase	gnl|CDD|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	4.05129e-39
NC_008347.1|WP_011643747.1|1962836_1963823_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	9.00962e-15
NC_008347.1|WP_011643760.1|1981543_1982473_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.90707e-95

Protein sequences

>NC_008347.1|WP_011643751.1|1971028_1971793_-|2OG-Fe(II)-oxygenase
MSESLNLRLNPALDAAHWASLYAQEKLVQIPDVFEPELADQISAILRDTLNWRIVFPEPTPGGDGEIVVQLTQQDVQRMGRDAISAQIGAVMQRAQKNYGYLYDAYPMIQAYTSHWDPGHPVHRITEFLNSPEFLQFGRTVTGAPVVTKADAQATRYARGHFLTRHVDEGHDQERVAAYTLGFTRNWQTDWGGLLMLVEDGLDVSRAFLPRFNMLSIFDGRRMHAVSPVSPFAGEGRYQITGWFRNDAPAGAAG
>NC_008347.1|WP_011643750.1|1968890_1971032_-|sulfotransferase-family-protein
MTLDPRLAQARDLRLQDAFDQARALCHTVLETRPDDAEAMGLLGICDIECGNVAGGRAWLDRAEAADADNASVHLYRSIQLEAEGNAAAALDAARRASECDTGRFDIWGRLGDLAGIGGNLPLAASCFSKALKAEGKHPARASVAIRLAGLEMQLGRADDAEAALDIAQAALGGGMPPEGYAIKAAIARNRADWSLLREVAQAWLDVVPNDNDARGALAQALSQLGYYRRAIEIFRPVVAERGRDPGSLAALGRLYLGARDTETARQTFEAALEIDPNSADALFGLARIGNFAGRVEEVETYCRRILAAHPDHLDACAFLAETTGGRIEDSELAVLETARDATDLPADRQSVSLFALGDTYHRRKRRADAFATWERANKVKWLQHNGKLESGYDRDAQHQRVDRLMGQFDGREPAGIPVSGPVPIFIVGMPRSGTTLLEAAVSAHADIEPSGELPALPYIFEQFERWAAANGWRGGPIPEGVLAEWREIYFRQLREYGLDGAKWVTDKQPSNFQAVGLIRQLFPQSPVIHIRRRPLETAFSIFRRNFTRQWPFAHSLDDIRHYYAEQARLCDYWQRTYPQTVTPVQYETLVVEFEATLRSLFDRMGLSWDDNCLEFYKLERQIMTFSAMQVRRPPSADHLDSTTPYLEWLGDFDEAIGACGVDAKTGEWLGTDNAGDGAAPDVKTAAPETARVPVASGGFWQRLFGGGGKSRS
>NC_008347.1|WP_011643749.1|1967103_1968894_-|tetratricopeptide-repeat-protein
MMETLQRAAGLLQAGRFGEALTLLDGVLNTQPDQPDALMLRAMARSRTGDDSGAVSDFLAAGLCHPQPHAVHNNLGNHHQRAGRLDAAVAAYREALRLAPGFADARMNLAITLSQGEDFEAARTAINAVLDQAPNHALLLNALGNVERRAGNPDAARRAYDGAIAADPQAVQPRINRGALRRETGEIEASCADLRDACGMAPGLAEAHAQLAHSLRTSLDITGAEQAYRQALALAPDDPGYHADLAGLLAEAGQGDKALTTLQGRIAVSGDPRLYEVLARLQMRSGRPEAARAAADAALARDASAVKAAMVRSELGLRCGDLRGALEDARLAFDASGGEDWGARHVLAEALLVNADWEGATDVLVGDPPAAHLQKHLALQSVAWRQTGNPRYAALCDYDRFARKMWIETPPGYESLAAFNAALSDRIERLHADGAAPLEQTLFGGTQSAGRLWNNDDPVIRALATALEGLAARYLAELPVDPSHPFLARNTGRSRLAGAWSVRLRSGGGHVDHVHPAGWVSASYYVSVPASVMAGERAGWLRIGAPGLPGLDLPVERYIQPEPGCAIVFPSYFWHGVEPFESDEVRVTAPFDLLPV
>NC_008347.1|WP_041636901.1|1963966_1966822_-|TonB-dependent-receptor
MASTLISGMAFAAPAVAQDDDVVVVTGSRIQRTDTVAPSPITNVSAEQLAVVNTVNTEDFINTLPQVVPAFDSTSNNPGNGTATVSLRGLGTTRTLVLVDGMRFVGSGPAQVVDLNSIPSALVESIDIVTGGASAVYGSDAVAGVVNFMMKDDFEGVEINASHETTLGDLDGEITTLSITMGGNFDDGRGNAVISMGYTDRQAVFQGDRDFSSLSNWDPGPGNAANGFISGGSSNIPGTRFRGATSSNFGAYGAGLVAADPSCASNICSGFFNTGSSINPMRFGSPNDTYNYAPSNYLQLPQERYNIAAFATYDVNEHLELYGRGIYANNVVDSQLAPTPAGVTLNVNLDNPTLPADLLALFTNDPASNNGDGTATIRTSRRYQEIGTRNSLRDTSSFQLVFGARGDINENWSYDVFANFSRSSISQIQTGNISVSALQAGVLCDGGPTAIASGCSAPYVDIFNGPNSMSAAGAESISRTGAQIDNVEMFQTVATVSGELPAFQLPTAEYAPALVMGVEYREASAESIPDSVLGPDVRGFNSSLPVSGVVDVYEFFAEAEIPLITGKAMVESLSANLAFRTSEYNTVGNTETFAVGLGWQINDQIRLRGNFNRAVRAPNVNDLFAPFTNGFPGAGDPCSGGANGSYSAATIDATCLAAGVPAGQLGAPFQGNAQMEALFGGNTGLGAETADTYTIGAVFEPAMIEGLTIQLDYYNIEIQDAISTVPLQTLLNECHLTGIQASCDTLYPAGAATPSRNPATGEMGANGFLPNLSPINVATLTAVGVDLRVDYGFSADIIGLPGDMAITYYGGFVSEADFTTSASSPVIECAGLYGLDCGEPTPEYKHSMQTSWYTGPFTTSLRWRHIGALDADPTTAATVSDLSDDITAKNYFDITFNYDVNEAFTATIGVTNFTDTAVPELGSTASEQANTWPATYDTLGRRLFVGGRLRF
>NC_008347.1|WP_011643747.1|1962836_1963823_-|class-I-SAM-dependent-methyltransferase
MMTRQANTERDAVAWAQFWEDEGSDAHVVNSEADAQALRAVWRPFLEGGLSSGGRCRILDVACGNAVVAEQAVSIAAEHGGAQHAICCDYSEAAVRAAVRRLDGASVSGIVADAARLPVPDQSLDIVVSQYGVEYAGATAFAELARVVAPGGAVQAIVHRVGGVIDRRCQDDEALLLATLDSGVFKSFMTLLKIRHKAAQAGLEPAAAKPASARFARSVERVETARDAAGLGAARSHVARLLTDLGRVATNPLAYRLDEMEQWVEGQRHALRGFANRMQSMSRAARDEGQVAILADFFREGGLSGVSVASFDPAHHRLSAGWILRGHR
>NC_008347.1|WP_011643746.1|1962289_1962547_-|preprotein-translocase-subunit-SecE
MTRNAKNTTPSTAKADTAAPKKKGVGPFKYLSQVRQEARKVTWTTRQETLVSTVLVLILSVIAMLFFWGVDSLISWTIQTILSLG
>NC_008347.1|WP_011643745.1|1961744_1962278_-|transcription-termination/antitermination-protein-NusG
MSAKWYIVHAYSNFEKKVADAIRIEASIKGLEDKFEEILVPTEDVVEVRKGRKINAERKYFPGYVLVKMDMTDQAYHLVTSTPKVTGFLGSGKKPIPVSENEVKRILGQMEEDAERPRPTVSYEIGETVNVIDGHFQSFNGVVEEVDDENGRLKVAINIFGRATPVELEYAQVEKIA
>NC_008347.1|WP_011643744.1|1961217_1961646_-|50S-ribosomal-protein-L11
MAKKIAGYIKLQVPAGAANPSPPIGPALGQRGVNIMEFCKAFNAKTQEMEKGMPIPTTITVFSDKSFTFAIATPPASFFLKKAAKIAKGSSTPSQTTAGTVSMAQCREIAEAKFNDLNANDLDQATKIIAGSARSMGLQVTE
>NC_008347.1|WP_011643743.1|1960514_1961213_-|50S-ribosomal-protein-L1
MANIGKRLSAARETFDRDTLYTIDDAVAHVKSNAKAKFDETIELAINLGVDPRHADQMVRGVCNLPNGTGRSVRVAVFAKGPKAEEATKAGADVVGAEDLMEQIQGGNINFDKVIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTMGVTKAVNDSKGGAVEFRVEKAGIIHAGVGKASFTEAALAENVRALVDAIVKAKPSGAKGLYVRRIALSSTMGPGVKIDTSAAVSA
>NC_008347.1|WP_011643742.1|1959696_1960212_-|50S-ribosomal-protein-L10
MDRIQKEASVEELNGIFSEAGSVVMAHYNGMTVAEMTELRAKLRELGGTFKVVRNRLAKIALQGKPGEGAADLFTGPVAIAYSEDFVAAPKVLVEYAKSNDKLVILGGFMEEDVFDAAGIDALSKMPSREELIATISARLMGQASQVAQRLMAPAQGLAGAIDVIREKADA
>NC_008347.1|WP_049755704.1|1973631_1974669_-|GGDEF-domain-containing-protein
MTVTLVSLEFLEDQPGLLVTGAIASLICLVAPIWVNAANDYKIRARLLGSLLLVMLVGMAAMGKALISPANIMMLPGIMTFTLAVGWRTGLAYLLAALSIYVGCVVQSPETAGYSVTSSNVTLLTALGGAAIFIFIGATIFRREMVNAAHRLETARKAAEISMAHFRERAATDALTGAANRAAIDQILAAETDRHRETGIPFAVVVFDLDHFKRVNDTFGHLAGDRVLIETVRVVKQALRTSDMLGRIGGEEFVVVLPGVSGQQARLMAERMRKMIAAISIQVDGRGSVSPTASFGVTECDVNASATDLLARADEYLYRAKRGGRNRVEPELCSSDKTVSASRAG
>NC_008347.1|WP_011643753.1|1974983_1975223_-|GIY-YIG-nuclease-family-protein
MHDVYLIESSVAGERYTGCTSDLKARLARHNAGGSPHTAKFRPWKLVSYLAFQSKGAAYAFERYLKTGSGKAFANKRLW
>NC_008347.1|WP_150099751.1|1975715_1976516_+|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB
MRNTSKRPDYSRRSKPAGTGDSGWIWGRHAVLAAVANKRREILELKVTRNAARDLPDGTDHQQVEPKVIDNALPEGAVHQGFAARARALPSESVNGVIDPTHGALLVLDQITDPHNVGAVLRSAAAFGIRAVIMQDRKAPPLFGTVCKSAVGAAERVAHVRVTNIADTLLEFSKAGRHVLGLAGEAELDLATALAAPDGKGWGPGLVLVMGSEDKGLRQRVAECCDQLVRIPMTDTVESLNVSNAAAIALYEAAKWRPVRDETPSA
>NC_008347.1|WP_011643755.1|1976566_1977571_-|DUF2807-domain-containing-protein
MTKPILLATSAAIAGIALFSMTAGASLQANDVGNYDAERLEIENFVGRIEIRTGSSDAISVSMTNTGGLVDDPSVSHSGSTVRIDGGLRLRNTNCSTRNNTMSIGLNRGRRHSIDEYPSLVITAPASLALGLDDSAYVGTAGDLGSADLSMNSCGRLDVGDIAGEARMAINGSGDITTGAIGAAAHISINGSGDIETGTIGREVSVSINGSGDVLTDDVNGDADVSINGSGDVEFGQVAGLAVGISGSGDVEAASMNGAFSARINGSGDIAVRDGRAQPFEAYIGGSGDISFGGTAVDLVVRENGGGDVSISEIEGSVNWTRNGRTVLRVGDAN
>NC_008347.1|WP_011643756.1|1977730_1978912_-|DUF819-family-protein
MSLISADNHLAVMASLFAIAAAGFLIEKTRIGALLTGAVWAIFLAIIASNIGLIPSTAPAYDFVWTYFVPVLIPLFLMKADLKKIFFETTRMAGAFLLAAVGTVVGAIIAFSLIDIGDYAAGTEAATLGTRQAAAVGAFTATYIGGSVNYGALMSSTGLGAADPSWASAMTAVDNLYSGFFLALLALMPGWAWLAKRFKPIDHSEGDDEVEEARPITAASLCLSAAYALIVVAIGSALADQLDAIWDDAGRKWKFAIISVLALIPATAFPKTIGGLRGGYEMGIALSFVFFAMIAAGADVISLLQQAPVLFGLIGIMLAVHAVIVFGVGSVLRLSLPELITASNAAILGATTAPALAAAKGWKDLVTPGVLVGVLGYAIGTPIATLVFELWPG
>NC_008347.1|WP_011643757.1|1978972_1979578_-|glutathione-S-transferase-family-protein
MTELTLYHCPKTRGFHALWMLEEIGEPFEVRIVNIRDDIQSEAYGAVNPMRKVPALDVGGELITESPAICAWLADRYPEKGLAPAIDATGRGSYLRWLFFTGSVIEPSFIDKAMSRETPRQMAGWGDLASVKATLADALDGRDFLVGDKFTAADLMIGSTLNFMMNFNLLERVEPFAGYVGQLVERPAYKRAMAREAAFAG
>NC_008347.1|WP_011643758.1|1979611_1980010_-|RidA-family-protein
MGTGTQRSFTGASWEKQVGYCRAIRRGDLVWVTGTVSLDDDGQPFAVGDPEGQARRCLDIIAKALAEVGASMSDVVRTRMFVTDIDHWEAFGRAHGDVFRDHPPATTMVEISRFIGPQFLIEIEADACVEAG
>NC_008347.1|WP_011643759.1|1980014_1981376_-|amidohydrolase
MKRQLMTAAAALALTLSAQPAALAYQDVAGDDALRTAIAADYETHLEDLYQHFHANPELSFREVETAARLASELRTLGFEVTEGVGQTGIVAVMENGDGPTLMLRADMDGLPVPEQTGLDYASQVTGTDLRGVENPVMHACAHDTHMTALVGAARQLVERTDEWSGTLVLIGQPAEELGEGAVAMIEDGLFERFPLPDFNVSFHTFSAIPTGTITYVPGFAMANVDSVDIHVQGRGGHGAYPHTTKDPIYLASQIVVSLQSLVSREVSPLEPAVVTVGAFNAGTKHNIISDGAHLQLTVRSYTDEVREQLLTGIQRIAANQAASYGLTPEEYPRVEIEETYTPALFNNPDLAARAVETMRGRFGAEAVVEASPVMGGEDFSRYHRTEHNIPTFMFWVGGTTQATLDDYTARGLVPPSNHSPFFAPDDPEGSITQATEAMAAVALDILAPSGSE
>NC_008347.1|WP_011643760.1|1981543_1982473_+|ABC-transporter-ATP-binding-protein
MTDTVLSLQGVTLRYGKLTALDAVDLAIPAGAIYGFLGPNGAGKTTAIRCAMGLLTPQSGRVLIDGHDLRQSRRKALASVGAVIETPALFPNLTGRENLDITRRMLDAPPALIDRALELVDMRDAADRRVGQYSLGMKQRMGLARALLAEPRLLILDEPTNGLDPAGIRDMRALIRALPERTGATIFMSSHLLSEVEQLASHVGLLQQGRVVFDGTLAALSEQQAPRLLVTATPADTAHEVMTASGFAGVIRDKDQFTLTDPEAITAERVAALNAALHAAGCQVSQLTLDRADLETTFMTLTGHGEART
>NC_008347.1|WP_011643761.1|1982469_1983195_+|ABC-transporter-permease
MINILIAEATKLRRSLVLLVAATPPVMVFALGVLVVASGNAPENWAMHTMAGSAIWAFFLLPMSVIGITALIAQLEHGPGTWSHTLALPVPRWQVFLAKALVSLGLMAIVSAAVAAAGYASAMIGLQLGEDAVMEGGFDPALAFELYGKMFIAGLLVMAIQWTMAMRFRSFAAPVSVGIGGTFVAVAATSAEKGLYFPWLMPVNVLASESGRGDLAILMGGIGGVIVFALAIVWLSRRDWG

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1017977 : 1031022	16	Paracoccus_phage(33.33%)	portal,tail,head,protease,capsid	NA
DBSCAN-SWA_2	1684379 : 1689616	7	Staphylococcus_phage(50.0%)	NA	NA
DBSCAN-SWA_3	2072401 : 2079382	7	uncultured_Mediterranean_phage(50.0%)	NA	NA
DBSCAN-SWA_4	2087771 : 2096052	10	uncultured_Mediterranean_phage(100.0%)	tRNA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_008347|1017977:1031022|DBSCAN-SWA
CATGCCCCACTGGCTCGACCGGCTGTTTGGCCGGGAGGAAAAATCGGCTCTGTCCAGCCGTCTGATTGCCCTGACGGCGGGGACGCGGTCGGCCTGGTCGCCGCGCGCGCTGCCGGCGATGATGCAGGCCGGCTATGCCCGCAATGCCATTGTCCATCGCTGTGTCCGGCTGACGGCGGAGGCGGCGGCCTCGGTGCCGCTCGCCGCGTCGGACGGTGCCATCACCCGCCTGCTCGACATGCCCAATCCGGACCAGTCCGGGCCGGAGCTGTGGGAAAGTCTCTATGGTTATCTACAGCTGGCGGGAAATGCCTATCTGGAACTTGCCAGCCTGGCCGATGAACCCCGCGCGCTACACCTTCTGCGGCCGGATCGTATGCGTGTGCTGGCCGGGCCGACCGGCTGGCCGGACGGGTGGGAATACGCCGCCGCCGGCCGGAAGCGGCGTTTCCAGCGGGACCGGGTCTCGGGTCGCAGCCCGGTTTTCCACATCCGCCTCTTTCATCCCGGCGATGATCATTACGGCCTGTCACCGCTGGAGGCGGTCGGCCGGGCGCTGGATCTTCATACTGCCGGCTCCGATTGGGCGCGCGCCCTGCTCGACAATGCGGCGCGGCCGTCCGGGGCGCTGGTCTTCAAGGGCGAAAACGGCCAGCTCTCGCCGGACCAGTTCGAACGCCTGAAGGCCGAGCTGGAAGCCAGCCATACCGGCGCCGCCAATGCCGGCCGGCCGCTGCTGCTGGAAGGCGGGCTCGACTGGACGCCGATGGCGCTCAGCCCGGCCGAGATGGATTTCACCACCGCCCGCCGCGAAGCCGCCCGCGAGATCGCGCTGGGGCTCGGCGTGCCGCCGCTTCTGCTGGGCCTGCCCGGCGACAATACCCACGCCAATTACGCCGAAGCCAATGCCGCCTTCCTGCGCCAGACCGTGCGTCCGCTGGTGATGAAAATGGCCCGCGCCCTGAGCGTCTGGCTGCGGCCCTGGTCTGTGCCTGACCTCGAGATACGGCCGGACTTTGCCGCGCTCGAGGAAGCCGGGGAGGCGCGCCATGCGTGAGATCGACAACTGGACGGTCCAGAAACAGGTCACCCTCGGCCTGATCTTCGCCATCCTCCTGCAAACCTCCGGCGCCCTGATCTGGTCCGGCCGCGTCGGCGAACGCCTCGACCAGCTCGAACATGTCAGCGACCGCGCCAGCCCGCTGGCGGAAAGGCTGGCGAGACTGGAAGCCGAGATGCGCCTGGCCAGGGAGAGCCTGGTGCGGATCGAGCGGCGGATGGAGGAGTGATTTTTCGTCGATTTTAAAGTGAGGCGCCGCTGCGCTCACCCATCCATTCATCGCTTGCCGAGACGTCGCCGCATCCGGTTTTCCAGGTCAAGGGCGCGAAGCGCCGCTGTGCGGTTACACCCTTGAGCTGGAAAACCGGATGCGGCCTGCTGGCTGACAAGGGATTTATGGATGATTACGCGCCGACGGCGCTGAATTTCCAACTCTATTCCAACTCCCATCTGCCCGAGCAACACGCACTTTTCCCGGCCGCAGCCGCGCGAAGACGCGGCGGAGAGCCGGGACCGACCGAACGTGCCTTGAAACGCTAAGTCTCCCGTTGGTCCCGGATAGCGCTGGCGCGCTTCCGGGAAAAATGCGTGGGGGCGCGCCCCGTAAATCGTCATTTCCTCCCAAACCCGGAGCCCCCTCATGACTGACACCCTCGTCATCGAGGGTCATGCGAGCCTGTTCGGGCTGGCTGACCTTGGCGGCGATGTGGTGGCGCGTGGCGCCTTTGCTGCTTCGCTCGCCACCCGCCGCACCATCCCCATGCTGTTCCAGCACGACCCGTCCGAGCCGGTCGGCCTGTGGACTTCGATCACCGAGGACGCGCGCGGCCTGTTTGTGCGCGGCGAGATCCTGACCTCCGGGGCCCGGGGCCGGGCGACGGCGGCGCTGGTCCGGCGCGGCGCGGTAGACGGGCTTTCCATCGGTTTTCGCACCCGCGCCGCCACGCCGCGAGAGGCGCGCGGCCGGGTGCTGACCGCGATCGATCTCTGGGAGGTCTCCATCGTGACCTTCCCCATGCTGCCCCAGGCGCGCCTGCGCCTTGTGGCTCCGGCGCGCAACCGCGTCGCCGCCTGACTTTCCACCTTTTGACAACTCCCACCCTTTTTCCAACCCCAGGAGATTTATGTGAGCAAGGAAACCAAGATGACCGCCGCGACCGGTGACAGCCGCGCGGTGATGGGCGAGCTGCTGGCTGCCTTCGAACAGTTCAAACAGGCCAATGACCAGCGCCTCGCCGAGATCGAGACCCGCGCCGCTGCCGATGTGCTGCTGGAGGACAAGGTCGCCCGCATCGACAAGGCGCTCGACAGCCAGAAATCCGCGCTCGACCGTCTCGTCCATGAAGCGGCCCGTCCCGGCCTCGCTCCGGGTGCCGACAGGTCGGCGGCCTCGACGGGCTTTGCCGCCTATATGCGCAGCGGCCAGCTGGCCGAAGGCAAGTCCGCCACGGCCGGCACGCCCGGTGAGGGCGGTCATGTCGTGCCGGCCGAAACCGAGGCCCGGATCGACCGGCTGCTGGCCGAAGCCTCACCCATTCGCGCCATCGCCACGGTGCGCCAGACCGCGTCCGGCACCTTCCGCAAGCCGGTCTCGCGCGGCGGGGCGGCGACGGGCTGGGTGTCCGAAACGGCGGCCCGCCCGGAAACCGATGCGCCCAGTCTCGAACTGATCGAGTTTCCCGCCGCCGAGCTTTACGCCATGCCGGCCGCCACCCAGCAATTGCTCGATGACGCCATGGTCGATGTCGAGGACTGGCTGGCCGAGGAGGTCCGCGACGTCTTCGCCGCCCAGGAAAGCGCCGCCTTTGTCTCCGGCGACGGCATCAACAAGCCGCGTGGCCTGCTGGACTACACTGCCGTCGCCGAGGGCACCCAAGCCTGGGGCGAGCTCGGCTATGTCGCCACCGGCACGGCGGGCGGGTTTGACGCGACAGATCCCGCCGACGCGTTGATCGATCTCATCTATGCACCCAAGACCGCCTATCGCGCCAAGGGCCGCTTCCTGATGAACCGCCAGACCGTCTCCGCCGTGCGCCGCTTCAAGGATGCCGACGGCAATTATCTCTGGCAGCCGGCGCTGGGCGAGGGGGCGAGTTCGACCCTGCTCGGCTATCCGGTCACCGAGGCCGAGGACATGCCCGATATCGGCACTGACAGCGCCTCGATCGCTTTTGGTGACTTCGCCCGCGGCTATCTGGTGCTGGACCGCCAGGGCGTCGAAGTCCTGCGCGACCCGTTCAGCGCCAAACCCTATGTCCTCTTCTACACCACCAAGCGCGTCGGCGGCGGAGTGCAGGATTTCGAAGCGATCAAGCTGCTGAAGTTTGGTGTGAGCTGAGTTCGGGAACCTGTTTGTCATCCCTGATGGACGCCCGGCGAAGGCCGGGCGAAAGTCAGGGACCTATGTGATTGCAGACAGTTAGGTCCCCGCCCTGCGTCCCGCGTTCGCGGGACATCCGGCGGGGATGACAAATGTTTGTAGCGTTGGTGTGACGCCCCTCCGGGCGCCCACCCCGCCATACATCCCTTGCCGGGACGTCGCCGTATCCGGTTTTCCAGGTCAAGGGCGGCGCAGCCGCCGCTGCACGGTTTCACCCCTGAGCTGGAAAACCGGATACGGCCTGCTGGCCGACAAGGAATGTATGGCTCAGTCCGCGCTGGGGCGCGGGTCGGCATTACCCGGAAGGTTAAAGCTCGCGGCAATGCGGTCGTCCAGATCACTATCGACCCAGCGTCGCTGGGTCATCAGCGTCCACAGGACGAGGAGCGGGTAGGCTTGAAACCAGCACGAGATGGCGGCCAGTGGCACCCAGATCACGGCCGCGCCGGCCCAGATCAAAGGGCCGGCTTGAGGTAGCACGACTGGTATCAGCAACAAGCTCGCAAACGGCACAACGACCAGAACAAACAGTCGAATGAAGTCGTTTTGATCGAGCTTCATGCGCCGATTGCCTTTTCTTTCACTCCTGGAGTTCTCCCCCATGTCCCTCACACTCCTTGACCCGCCCACCACGGAGCCTGTCAGCCTGTCCGAAGCCAGGGATCGCCTTCGGGTGACGGATGCGTCGCAGGATGACGCGATCAACCACTGGATACAAACCGCGCGGGCACGTGTCGAGCGGGATACGGGGCGGGCCCTGATCGCCCAGACCTGGCTGGAGCGGCGCGATGTGTGGTGGGGCGAGGGGCGTCTGTCGGCCTTCGGGACACGGTTTCGCCTGTTGAAACCGCCCCTGATCGCGCTGGAGGCGGTCACGGTGTACGGGCTGGATGATGCGCCGTCGGAGATTGATCCGGCGGCGTTTTTTGTCGACACGCTGAGCGATCCGGGACGCCTCGTTCTGAGGCCGGGGCAGAGCTGGCCTCTGCCGGGCCGGGCGGCGGCAGGGATCGGGATTCGCTTTCGCTGCGGCTATGGCGACCAGCCCGGGGATGTACCGGCGCCGCTGCGCGAAGCGATTCTCCAGCTCACCGTGCATCTGGCTGAAACCAATGGCGCCAGTGCCCTGCCGCCTGGCGTGGCGGCTCTGATCGCGCCTTATCGCCCGGTGATGTTGTGAGCGGCGTCATTGAGGCCTTGCGCGAAGCCCTGACCGCGCAGTTTGCCAGTGACCCGGCGGTGATGCTCCTGCTGGGAGATCCGATCCGCCTTTATGACGAGCGCTCGACCCGCGCCGCTTTTCCGCATGCCAGCTGGGGCCGTATCGAGACCCATGAGAGCGGTGCCGACGGCGTCCGCCTGCTGGAAGTCAGGCTCGGGCTGGACGTCTGGTATCGCGATGGCGAGCCGGGACCAGTGCTCGACGCCCTGGCCGACAGTGTCAGCGCTGCTGCACTTCCAAACCTGCCCGAACCCGCTCTGCCCGAGCCCTGGCGCCTGATCACACTCAACCCCGCCTATCGCGACGTCTTCTCGACCCGCGAGCGGCGGTTGAAACGCGGCCTTCTGCGCCTGCGCGCGGTTGTGGGCCGTGCAAGCCAAACCCAAGAAGGAGCCCTGCCATGAGTGTCCAATCCGGCCGCGATATCCTGATCCGTATCGGTGATGGCGGAGATCCGCCGGTCTTCACGGCGGCCGCCGGCCTGCGGCTGAAGACGATTTCGCTTAATGCCCGTCTGGTCGATGTGACGAATGCCGACAGTGTCGGCGGCTGGCGCGAGCTGATGGACGGGGCGGGGTTGAAGACCTGTGCTGTTTCCGGCTCGGGCGTGTTTGTCGATGCGGCAGCCGATGCGCGGATCCGTCAGGCCTTTTTCGACCGCTCAGCGGACAGCTGGCAATTGCTCATTCCTGATTTCGGCACGCTGACCGGCGCCTTCCAGGTCGCGGCACTGGACTATGCCGGCCGCCATGATGGCGAGGCGAGCTGGTCGATGAGCCTGGCCTCGGCCGGACCGCTGGTCTTCGAGGCGCTGTGAGATGGCCAACCGGCAACGCGGCGAGGTCGAACTCGTCATCGGTGAGCGCACGTTGACGCTCTGCCTCACCCTGGGAGCCCTGGCGGAAATCGAAGCGCTCTGCCCGCCTGGCGAGACGCTGGGCGCCGGACGCCTGTTGTTGATCGTCGAAGTGCTGGCGCGCGGCGGCGGCGAGGTGATCGGCCTGGATGAGCTGAAGGCCGCCCCGATCGATATCGGCGATGCCGCTGCGGCGGTGGCTGACTGTTTCGACCTTGGCAGCGCGCCATGAACTGGGCGCTGGTCCTGCGCGCCGGCCTCGCCCTGGGACTGGTGCCGGAACAGGTCTGGCGCCTGTCGCTGGTCGAATGGCGCGCCCTGACGGCTTTCGGCGGCCAGGCCCCGCTCGACCGGGCCGGGCTGGAGGCGCTGCGGACCCGTTTTCCTGATCCTGAATTTGCGGACACAACAGAGGAGGCAAGGCCATGACCTCATCCCGTCCGGATACCCCGCTGGAGGACTTTGCCGACGGAGCGGGCCAACGCGCTGCCGAGGCATTGGAGACCGCTTTCGAGCGGGCCGGCAGCCGGATCGAGCAGGCGCTCGGTCGGGCGGCCCGCTCCGGCGAGGCGGACTTCTCGCGCATGACCGAGGCGATCCTGGCGGACCTCGCCCGACTGGCTGCCCAGCAGGTGATCGAACGACCGCTGGCCGGGCTGATCGATCGGGCGCTGGGGGCGATCACGCCGGATGGTGCCCGCGCCGAGGGCGGGCCGGTGCAGCCGGGCGGCGCCTATCTGGTTGGTGAGCGCGGTCCCGAACTCTTCACGCCGGGCGTGGCCGGTCAGGTCAGCCCATCGGGCAGCGGCGGTGGCGGTCAGACTGTCCATATCCACCTGACCCTGCCGCCGGGATCAAGCGACAGCAGCGAACGCGCCATTGCCCAATCGCGGGGCCGGATCGCCCGCTCCTTGGCGCGGGCGGTGGATGAGGGGAGGCGCTGGTCATGACTGTGTTTCACGAGGTCCGCTTTCCGTTCTCGGTTTCCGTCGGTGCCAGCGGCGGGCCGGAGCGGCGCACTGACATCGTGCCGCTGGTCTCCGGCCGCGAGCAACGCAACACGTCCTGGGCCGATAGTCGCCGCCGCTATGATGTCGGGCCGGGCGTGCGTTCGCTGACCGATATCCACACACTGATCGGGTTTTTCGAGGCGCGGCGCGGGCCGTTGCACGGGTTTCGCTTTCGCGATCCGTTCGACAATCGCTCCGCCGCGCCGGACCAGGCCCCGGATCCGGCCGACCAGCTGATTGGCACCGGCGATGGAGCAGTGACCCAGTTCCAGCTGGTCAAGCATTATGAGAGCGGCGGCGAGCTTTGGACGCGCACCATCACCAAGCCGGTCGAGGGCTCGGTCCGGGTTGCCGTGGAGGGCGTGGAGACTTTCGACTTCACGCTCGATACGGCGAACGGGCGGGTCACGCTGGCTGATCCGCCAGCGTCCGGGCAGGCGGTCACGGCCGGTTTTGCCTTTGATGTGCCGGTGCGCTTTGCCAGTGAGCGGCTCGACCTCGCCCTCGACGAGCCCGGTGCGGCGTCGGCGCTCTCCATCCCCCTGATCGAAATCAGAGTCTGAACACGGCCGCAAAGCCTGCCGGAGGTAATCATGAAAACCGTGCCTGCATCAATCCAGGCGGCGCTCGATGAGGGCGTCACCACAGTGTGTGATTGCTGGATCGTGACGCGCGCTGACGCGTCCCGTTTCGGCTTCACCGATCATGACCATGATCTGGTGTTTGAGGGCGTGACCTGCCGTGCCGGAAGTGGTTTTGGCGGTAGCGATGTCGCGGCGGAAGCCGGGTTGGCGCCGGATCAGGGCGGTCTGGTCGGCGCGCTGGATGATGACGTCCTGCGGCGCGACGATCTGGAAGCCGGGATCTGGTCCGGTGCGCGGGTGGAAAGCTGGCGCGTCGACTGGGCCAGCGATCCGCCGGTCGGCGTGAAGACCGGGCAGGGCGAGCTGGGCGAGATCCGCCGCGTTGATCACCGCTTCGAGGCCGAGCTGCTGGGTCTTGCCCACCGGCTGGGCCGGGTTTGCGGCCGGGTCTTTGCCCGTCGCTGTGATGCGGTGCTGGGTGATCATCGTTGCTCGGTGGATGGCAGCCATCCCGGTTTTGCGCTGGGCTGTGACCAGGCTTTCACCACCTGCCGCGACCGTTTCGCCAACACGCTCAATTTTCGCGGCTTCCCGCACATGGTCGGCAATGATGTGCTGCAGGCCTCACCGGCCAGCGAGCCGGTCCGCGATGGCTCGTCCCGGGGGCTGGTCGGATGAGGCGGGGCAAGCGCGCCACCGCCCACGTCACCGCCCGTGTTCAGGCCCGTGTTCGGGCCTTGGCCGAAGCGCGGCGCTGGATCGGCACGCCTTATGGTCACCAGGCCAGTTGCCTGGGCGCGGGCTGTGACTGTCTGGGCCTCATTCGCGGGATCTGGCGGACGCTTTACGGCCAGGAAGCGCAGACCGTTCCGCCCTATGGCCCTGATGTCGCCGGGACACCGCTCGCCGAAGCGCTGATGGCGGCGGTCTGTGCCCATTTCGTGGAGATCGACAAGGACAGTCCGCGCCCGGGCGATGTGCTGCTGTTTGCCGACCGGCCCGGCGGGACGGCGCGTCATTGCGCAGTGCTGTCGCAGCGCGACCGGATCATCCACGCCTATTGGCGGCGCAGCGTCGTCGAGACCGCGCTGACACCCTGGTGGCAGCGCCGACTGGTTGCTGCCTTCGCCTTTCCCGATCTGCCCCCTGCCGAACCCCGCGAGGAGATGACATGGCCCAACTTGTCCTGACTGCCGGCCGGGTTGCCCTGACAGCGGCCCGCGCTGCCCTGCCGACGCTGGGACGGATCGCGGCCAGCGCGGCGATCAATTCGCTGCTGCCCGGACGCGAGGGGCCGCGCCTGCTCGAACTGCCGGTCCAGACCTCCACCGATGGCGCTGCCATGCCCCAGGTCTGGGGCCGGGCCCGTCTGGCCGGCCAGGTGATCTGGGCCGCCCGTTTCACCGAGCACGCCCAGACCTCCGGCGGCGGCAAGTCCGGGCCGAAGGAGACCGGTTTCACCTATTCGCTCTCCTTTGCCGTCGGTCTGTGTGAGGGCGAGATTTCCGGGATCGGGCGGATCTGGGCCAATGGGGCATTGCTCGACCAGTCACGCTATCCGGTGCGCTGGCATGCTGGCCGCGACGACCAGCTGCCCGACCCCTTGATCACCGCGATCGAAGGCCCTGACGCGCCGGGTTTTCGGGGCACCGCCTATCTGGTGCTCGAAGACCTGCCGCTGGATGAGTTCGGGCATCGCCTGCCCAATCTGTCGGTCGAGGTGTTTCGCGGTGTCGGATCGGACGGGTTGGAGCAGCAGGTGCGCGGCGTCAATCTCATCCCCGGCTGCGGTGAGTTCGCGTTGAGCCCGGACCCGGTCATGCGTCTGGAGGGGCCCGGTGCGGAGACAGCCGTCAATCGCAATAATGCCCGCGGCCTGAGTGATGTGCTGGCCGCGCTCGATGATCTGGAACGCGACCTGCCGGCCTGCCGCTCGGTGCAGATCGTGCTGGCCTGGTTCGGCGATGACCTGCGCTGCGGGGAATGCGAGATCCGGCCCGGCGTTGAGGATCGCGACACTGAGACGCGCCCGACAGCCTGGCGCGCGGCTGGCGCCGAGCGCGACACGGCCTGGCTGGTCGGCCGGATTGATGACCGTCCGGTCTATGGCGGCACGCCGGATGATGCCGGTGTGGTGGCGCTGATCGGGGCGCTCAAGGCGCGCGGCTTTGCGGTCACGCTCTACCCCTTCATCCTGATGGACATCGCTGACGGCAATTCCCTGCCGGACCCCGATGGCGGTAGCGGGCAGCCCGCCTATCCCTGGCGCGGCCGTATCCGGCCCGGGGCGGGCAGTGTTGCGGCTCAGGTGGACGCCTTTTTCGGGACCGCGCAGGCGACGGATTTCACGGTTAATGGCGGGACGGTGAGCTATGCCGGTCCGGACGCGTGGCGCTATCGGCGTTTCATCCTGCATTGCGCCGCCCTGGCAAAGGCGGCGGGCGGCGTGGACGGTTTCCTGATCGGTTCGGAAATGGTGGCGCTGACCACATCCGGGGCCGGTGAGAACTATCCGGCGGTCGCGGCGCTGTGCGCGCTGGCGACCGAGGCGCGCAGCCTGCTCGGCCCGTCCACGCGTCTGTCCTATGCGGCCGATTGGAGCGAGTATCACGGTCATCAAAGCGGCGGTGGGGCCAAGATATTCCATCTCGACCCGCTCTGGTCCCACCCCGCGATTGATGCCGTGGCGATCGATTTCTACATCCCGCTGGCCGATTGGCGCGACGGCGATGACCATCTCGACGCGGCGCAGGCCTTGGGCCCGCATGACAAGAGCTATCTCGCCAGCCAGGTGACGGGCGGGGAGGGGCATGACTGGTATTACGCCTCGCCGGAGGATCGCGACGCCCAGCTGCGCACGCCGATCAGCGATGCGGTGCATGGCGAGGACTGGGTTTGGCGCTACAAGGACCTCATCGGCTGGTGGTCGAACGCCCATCACGACCGGCCCGGCGGGGTTCGCGCGGTCGCACCCACAAGCTGGATCCCGGCCTCGAAACCCATCTGGCTGACCGAGACCGGTTGTCCGGCGGTCGACAAGGGGGCCAATCAGCCCAATGTCTTCATCGATCCGAAAAGCTCCGAGAGCGCACCGCCCCATCACTCCACCGGCGCACGCGATGACCTGATCCAGCGGCGCTATCTGGAAGTCCTGCTGGCGCACTGGGATGATCCGGCCGCCAATCCGGTCTCGGCGCTGTATGGCGGCCCGATGATCGAGCCGGAGTGGACCCATGTCTGGGCCTTCGATGCGCGACCCTGGCCGGACTTCCCGGCGCGCTCGGAAATCTGGTCGGACGGGGAAAACTGGCGGCTGGGCCACTGGCTCAATGGCCGCGCCGGGCTGGTCCCGGTCGCGCGCATCATTGACGAGTTGTGCGATGCGGCCGGTCTGGCCGAACGCGACGTGTCCGCCACCCATGATCTGGTCGCCGGCTATGTGATGGACCGGCCAATGCCGGCGCGTGACGCGCTGGCGCCATTGCTTGACCTTTTGGGTGTCTCCGTCCTCGAGGGGGCCGACAGTGTGCGCTTTGTCTCCGCCGGGGTGGCGAGCGGTGCCGATACACTGACTCTCACCGACCCGGTCGATACGGGCGAGGACAGCGTCACCCGCGTCCATCCCGCTCCGCTGGACCTTGTCCGTGATATCGCTCTGGGCTTTTACGACGACCGCGCCAGCTATCGCACCGGCCATGCCTCGGCCCGGGGCACGCTGGGGACGGTGGCGACACGCTCGCTCATCGTGCCGGTGATTGCCGATGCCGATACCGCCCGGCGCTGGTGCGGCGACCGCCTGCTGGCAGTTCACGCGCAGGCCGAGCGGCTCGATCTGGTCCTGCCGCCCGAATTCCTGGCGGTGGAGGTGGGTGACCGGATCGCGGTCGATGACGCGGTCTGGCAGGTCGCGGCGCTGGAGGGTGACGCCGTGCGTCAGGCCCGCCTGCACCGACCGACAGGGCAGTCTGTCACCGTTGCGGCAGGCGAGACCGGAGCCGACCCGGCTCTGCCCGGCACGTCAATGCGCCCGGCCCTGGAGTTACTCGACCTGCCGCTCCAGTCCGGTGAGAGCCGGGACGGTCCCCTTGTGGCCGCCTGGGCGCAGTCATGGCCGGGCGCTGTCGATATCCATCTGTTTGACCGTCACGCCGTGACCCTGACCCGTCCGGCGAGGCTTGGCTGGCTGGCCGGGGACCTGCCCGCCGGGCCGGTCGGTCGCTGGGACCGGGCCCATGCGGTGCTGCTCGATCTGGACTGGGGCACGCTGGCCAGTGCCGACCCGGCCGCCGTGCTGGACGGGGCCAACCGGATCGCCATCGAGGCCGCGCCCGGCGTCTGGGAGGTGATCGGCTTTTGCGATGCGCAGTTGCAGGCGCCCGGGCGCTATCAGCTGACCGGCCTGTTGCGCGGGCTGGGCAATGGTGTGTCACGGACAGCCGTCAGTGGTGCCCGTCTGGTCGTGCTGGATGCGGCCTGTGAGGCGCTGACATTGGCCCCGCACGAGCGCGGTGTGCCGCTCGAACCCGTCGCCGTCGCTGCCGGCTTCGCGCCGGGCGATGATGCCGCGACCCGGCGCGAGGTGCCGCCGGTCGCCTCCGACCTGACACCGCTGGCCCCGGTCCATCTCGCCCACACACGCACCGCCGGCACATTGAACCTGAGCTGGATCCGGCAGACCCGTATCGGCGGGGATGACTGGTCGGCGCCCGACGTGCCGCTGGGCGAGGCGGGCGAGGCCTGGCAGGTTGAGCTGGATGATGCCGGTAATGTGCATCTGCTGGACGGCCTCACGGCCCCGTCTCTCACACTCACCGACAGCGATCTGGTCGCGGCATTCGGGGCTGTGCCCGATCATCTGACCGTGCGGGTGGCGCAGCTGTCGGCGCGCGTCGGCCCCGGGCAGGTGGCAGAGGCTGAGGTCGATCTGTGAGCTGTGCTTTGATATCAGTCGCAAAGCCCCTTACATGAAGCATGGCCTTCGCGGCCGACAGGCTTTACCGGCAAGGCAAGACGGGTATGGACGATCCCTACAAGACGCTCGGCGTCTCCAAAACGGCGACCGCCGACGAAATCCGCAAGGCTTATCGCAAGCTGGCCAAGGAGCTGCATCCCGATTCCAATCCCGGCAATGCCGCCGCCGAGGAGCGTTTCAAACACGTCTCGCAAGCCTTCAAACTGTTGTCCGACCCGGAAAAGCGGGCCGAATATGACGCTGCGGCGCGGGCCGGCTTCCATCCGGGCATGGGCGGGATGGGAGGCATGGGCGGCGGCCCAGGCGGCAAGCCGTTCAATTTCCGCCAGTCGCGCCATCAGGGCCGCGGCGGGTTTGAGGATATATTCTCCGACCTGTTCACCGATTTTGGCGGACAGGGCGGTGGCGGACGCCAGCGGCAGGCCCCGCGCAAGGGGGCTGATGTGCGCCAGACCGTGACCGTCGATTTCATGCAGGCGGCCCAGGGCGGCAAGCACCGGGTCAGCTTGCCGGGCGGACGGACGCTCGATGTCGCGGTGCCCTCGGGTGCCAGTGATGGCCAGGTGCTGCGCCTGCGCGGTCAGGGTGAGGCCTCTGCCATGGGTGGCGAGCCGGGCGATGCGCTGATCGAGATCAAGGTCGCCGAACACAAATTCTTTTCGCGCGCGGGCGATGATGTCCGTCTTGAGCTGCCGATCAGCCTCAAGGAAGCGGCGCTGGGTGCCAAGGTGCGCGTGCCGACCATTGACGGTCCGGTTGATGTGCGGGTGCCGCCCGGCTCCTCGACCGGAACCTTGCTGCGTCTGCGTGGCAAGGGATTTGCGGGCAGCAAGGGCAAGCGCGGCGACCAGCTGGTCAGGCTGATGGTCGCGTTGCCGTCGAGTGATGAGGCCCTCAAGGCCTTCCTCGAAAAATGGTCACCGCCCGATGGCCATGACCCGCGCAAGGGTCTGCATTCGTGA

Protein sequences of DBSCAN-SWA_1

>NC_008347|1017977:1031022|1019025_1019265_+|WP_011642860.1|DBSCAN-SWA
MREIDNWTVQKQVTLGLIFAILLQTSGALIWSGRVGERLDQLEHVSDRASPLAERLARLEAEMRLARESLVRIERRMEE
>NC_008347|1017977:1031022|1021683_1021977_-|WP_041636799.1|DBSCAN-SWA
MKLDQNDFIRLFVLVVVPFASLLLIPVVLPQAGPLIWAGAAVIWVPLAAISCWFQAYPLLVLWTLMTQRRWVDSDLDDRIAASFNLPGNADPRPSAD
>NC_008347|1017977:1031022|1020180_1021374_+|WP_041637296.1|capsid|DBSCAN-SWA
MTAATGDSRAVMGELLAAFEQFKQANDQRLAEIETRAAADVLLEDKVARIDKALDSQKSALDRLVHEAARPGLAPGADRSAASTGFAAYMRSGQLAEGKSATAGTPGEGGHVVPAETEARIDRLLAEASPIRAIATVRQTASGTFRKPVSRGGAATGWVSETAARPETDAPSLELIEFPAAELYAMPAATQQLLDDAMVDVEDWLAEEVRDVFAAQESAAFVSGDGINKPRGLLDYTAVAEGTQAWGELGYVATGTAGGFDATDPADALIDLIYAPKTAYRAKGRFLMNRQTVSAVRRFKDADGNYLWQPALGEGASSTLLGYPVTEAEDMPDIGTDSASIAFGDFARGYLVLDRQGVEVLRDPFSAKPYVLFYTTKRVGGGVQDFEAIKLLKFGVS
>NC_008347|1017977:1031022|1030104_1031022_+|WP_041637299.1|DBSCAN-SWA
MDDPYKTLGVSKTATADEIRKAYRKLAKELHPDSNPGNAAAEERFKHVSQAFKLLSDPEKRAEYDAAARAGFHPGMGGMGGMGGGPGGKPFNFRQSRHQGRGGFEDIFSDLFTDFGGQGGGGRQRQAPRKGADVRQTVTVDFMQAAQGGKHRVSLPGGRTLDVAVPSGASDGQVLRLRGQGEASAMGGEPGDALIEIKVAEHKFFSRAGDDVRLELPISLKEAALGAKVRVPTIDGPVDVRVPPGSSTGTLLRLRGKGFAGSKGKRGDQLVRLMVALPSSDEALKAFLEKWSPPDGHDPRKGLHS
>NC_008347|1017977:1031022|1023919_1024444_+|WP_011642869.1|DBSCAN-SWA
MTSSRPDTPLEDFADGAGQRAAEALETAFERAGSRIEQALGRAARSGEADFSRMTEAILADLARLAAQQVIERPLAGLIDRALGAITPDGARAEGGPVQPGGAYLVGERGPELFTPGVAGQVSPSGSGGGGQTVHIHLTLPPGSSDSSERAIAQSRGRIARSLARAVDEGRRWS
>NC_008347|1017977:1031022|1026259_1030018_+|WP_011642873.1|tail|DBSCAN-SWA
MAQLVLTAGRVALTAARAALPTLGRIAASAAINSLLPGREGPRLLELPVQTSTDGAAMPQVWGRARLAGQVIWAARFTEHAQTSGGGKSGPKETGFTYSLSFAVGLCEGEISGIGRIWANGALLDQSRYPVRWHAGRDDQLPDPLITAIEGPDAPGFRGTAYLVLEDLPLDEFGHRLPNLSVEVFRGVGSDGLEQQVRGVNLIPGCGEFALSPDPVMRLEGPGAETAVNRNNARGLSDVLAALDDLERDLPACRSVQIVLAWFGDDLRCGECEIRPGVEDRDTETRPTAWRAAGAERDTAWLVGRIDDRPVYGGTPDDAGVVALIGALKARGFAVTLYPFILMDIADGNSLPDPDGGSGQPAYPWRGRIRPGAGSVAAQVDAFFGTAQATDFTVNGGTVSYAGPDAWRYRRFILHCAALAKAAGGVDGFLIGSEMVALTTSGAGENYPAVAALCALATEARSLLGPSTRLSYAADWSEYHGHQSGGGAKIFHLDPLWSHPAIDAVAIDFYIPLADWRDGDDHLDAAQALGPHDKSYLASQVTGGEGHDWYYASPEDRDAQLRTPISDAVHGEDWVWRYKDLIGWWSNAHHDRPGGVRAVAPTSWIPASKPIWLTETGCPAVDKGANQPNVFIDPKSSESAPPHHSTGARDDLIQRRYLEVLLAHWDDPAANPVSALYGGPMIEPEWTHVWAFDARPWPDFPARSEIWSDGENWRLGHWLNGRAGLVPVARIIDELCDAAGLAERDVSATHDLVAGYVMDRPMPARDALAPLLDLLGVSVLEGADSVRFVSAGVASGADTLTLTDPVDTGEDSVTRVHPAPLDLVRDIALGFYDDRASYRTGHASARGTLGTVATRSLIVPVIADADTARRWCGDRLLAVHAQAERLDLVLPPEFLAVEVGDRIAVDDAVWQVAALEGDAVRQARLHRPTGQSVTVAAGETGADPALPGTSMRPALELLDLPLQSGESRDGPLVAAWAQSWPGAVDIHLFDRHAVTLTRPARLGWLAGDLPAGPVGRWDRAHAVLLDLDWGTLASADPAAVLDGANRIAIEAAPGVWEVIGFCDAQLQAPGRYQLTGLLRGLGNGVSRTAVSGARLVVLDAACEALTLAPHERGVPLEPVAVAAGFAPGDDAATRREVPPVASDLTPLAPVHLAHTRTAGTLNLSWIRQTRIGGDDWSAPDVPLGEAGEAWQVELDDAGNVHLLDGLTAPSLTLTDSDLVAAFGAVPDHLTVRVAQLSARVGPGQVAEAEVDL
>NC_008347|1017977:1031022|1019676_1020111_+|WP_011642861.1|head,protease|DBSCAN-SWA
MTDTLVIEGHASLFGLADLGGDVVARGAFAASLATRRTIPMLFQHDPSEPVGLWTSITEDARGLFVRGEILTSGARGRATAALVRRGAVDGLSIGFRTRAATPREARGRVLTAIDLWEVSIVTFPMLPQARLRLVAPARNRVAA
>NC_008347|1017977:1031022|1022592_1023042_+|WP_011642865.1|DBSCAN-SWA
MSGVIEALREALTAQFASDPAVMLLLGDPIRLYDERSTRAAFPHASWGRIETHESGADGVRLLEVRLGLDVWYRDGEPGPVLDALADSVSAAALPNLPEPALPEPWRLITLNPAYRDVFSTRERRLKRGLLRLRAVVGRASQTQEGALP
>NC_008347|1017977:1031022|1023038_1023455_+|WP_011642866.1|tail|DBSCAN-SWA
MSVQSGRDILIRIGDGGDPPVFTAAAGLRLKTISLNARLVDVTNADSVGGWRELMDGAGLKTCAVSGSGVFVDAAADARIRQAFFDRSADSWQLLIPDFGTLTGAFQVAALDYAGRHDGEASWSMSLASAGPLVFEAL
>NC_008347|1017977:1031022|1023722_1023923_+|WP_011642868.1|tail|DBSCAN-SWA
MNWALVLRAGLALGLVPEQVWRLSLVEWRALTAFGGQAPLDRAGLEALRTRFPDPEFADTTEEARP
>NC_008347|1017977:1031022|1024440_1025067_+|WP_011642870.1|DBSCAN-SWA
MTVFHEVRFPFSVSVGASGGPERRTDIVPLVSGREQRNTSWADSRRRYDVGPGVRSLTDIHTLIGFFEARRGPLHGFRFRDPFDNRSAAPDQAPDPADQLIGTGDGAVTQFQLVKHYESGGELWTRTITKPVEGSVRVAVEGVETFDFTLDTANGRVTLADPPASGQAVTAGFAFDVPVRFASERLDLALDEPGAASALSIPLIEIRV
>NC_008347|1017977:1031022|1017977_1019033_+|WP_011642859.1|portal|DBSCAN-SWA
MPHWLDRLFGREEKSALSSRLIALTAGTRSAWSPRALPAMMQAGYARNAIVHRCVRLTAEAAASVPLAASDGAITRLLDMPNPDQSGPELWESLYGYLQLAGNAYLELASLADEPRALHLLRPDRMRVLAGPTGWPDGWEYAAAGRKRRFQRDRVSGRSPVFHIRLFHPGDDHYGLSPLEAVGRALDLHTAGSDWARALLDNAARPSGALVFKGENGQLSPDQFERLKAELEASHTGAANAGRPLLLEGGLDWTPMALSPAEMDFTTARREAAREIALGLGVPPLLLGLPGDNTHANYAEANAAFLRQTVRPLVMKMARALSVWLRPWSVPDLEIRPDFAALEEAGEARHA
>NC_008347|1017977:1031022|1025762_1026278_+|WP_011642872.1|DBSCAN-SWA
MRRGKRATAHVTARVQARVRALAEARRWIGTPYGHQASCLGAGCDCLGLIRGIWRTLYGQEAQTVPPYGPDVAGTPLAEALMAAVCAHFVEIDKDSPRPGDVLLFADRPGGTARHCAVLSQRDRIIHAYWRRSVVETALTPWWQRRLVAAFAFPDLPPAEPREEMTWPNLS
>NC_008347|1017977:1031022|1025097_1025766_+|WP_011642871.1|DBSCAN-SWA
MKTVPASIQAALDEGVTTVCDCWIVTRADASRFGFTDHDHDLVFEGVTCRAGSGFGGSDVAAEAGLAPDQGGLVGALDDDVLRRDDLEAGIWSGARVESWRVDWASDPPVGVKTGQGELGEIRRVDHRFEAELLGLAHRLGRVCGRVFARRCDAVLGDHRCSVDGSHPGFALGCDQAFTTCRDRFANTLNFRGFPHMVGNDVLQASPASEPVRDGSSRGLVG
>NC_008347|1017977:1031022|1022017_1022596_+|WP_011642864.1|head,tail|DBSCAN-SWA
MSLTLLDPPTTEPVSLSEARDRLRVTDASQDDAINHWIQTARARVERDTGRALIAQTWLERRDVWWGEGRLSAFGTRFRLLKPPLIALEAVTVYGLDDAPSEIDPAAFFVDTLSDPGRLVLRPGQSWPLPGRAAAGIGIRFRCGYGDQPGDVPAPLREAILQLTVHLAETNGASALPPGVAALIAPYRPVML
>NC_008347|1017977:1031022|1023456_1023726_+|WP_011642867.1|DBSCAN-SWA
MANRQRGEVELVIGERTLTLCLTLGALAEIEALCPPGETLGAGRLLLIVEVLARGGGEVIGLDELKAAPIDIGDAAAAVADCFDLGSAP

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011642859.1|1017977_1019033_+|portal	phage portal protein	W8ECU7	Geobacillus_phage	1.5e-49	35.7
WP_011642860.1|1019025_1019265_+	hypothetical protein	NA	NA	NA	NA
WP_011642861.1|1019676_1020111_+|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	4.1e-25	44.6
WP_041637296.1|1020180_1021374_+|capsid	phage major capsid protein	Q8W627	Enterobacteria_phage	2.8e-63	38.2
WP_041636799.1|1021683_1021977_-	hypothetical protein	NA	NA	NA	NA
WP_011642864.1|1022017_1022596_+|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_011642865.1|1022592_1023042_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_011642866.1|1023038_1023455_+|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_011642867.1|1023456_1023726_+	gene transfer agent family protein	NA	NA	NA	NA
WP_011642868.1|1023722_1023923_+|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_011642869.1|1023919_1024444_+	hypothetical protein	K7YAN3	uncultured_Mediterranean_phage	1.1e-05	61.8
WP_011642870.1|1024440_1025067_+	DUF2460 domain-containing protein	A0A0B5A2K3	Paracoccus_phage	3.4e-49	48.3
WP_011642871.1|1025097_1025766_+	DUF2163 domain-containing protein	A0A0B5A5B8	Paracoccus_phage	7.2e-29	43.4
WP_011642872.1|1025762_1026278_+	C40 family peptidase	F4YXU4	Roseobacter_phage	1.6e-23	39.8
WP_011642873.1|1026259_1030018_+|tail	glycoside hydrolase/phage tail family protein	A0A0K1LLC1	Rhodobacter_phage	8.8e-225	39.2
WP_041637299.1|1030104_1031022_+	DnaJ domain-containing protein	A0A2L0UZR4	Agrobacterium_phage	4.9e-20	29.3

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NC_008347|1684379:1689616|DBSCAN-SWA
CTCATGCGCTCCTGAACCGGTTGCGCAGCTCGATCAGCATCATCGCTGCATTCGCTGCATCCGCGCCCTTATTCTTGTCGATCGCCCGCTTCAAGGCCTGTGCGCGGTTCTCGACGGTGAGGATACCATTGCCGACCGGGATGGCCTTCAGGTTCAAATCCATGATTCCACGAGCCGATTCACCGCAGACATAGTCGTAATGCGTGGTTTCGCCACGAATGACACATCCCAACGCGACATAGCCATCATAGCCGGCGCCGGCCTTTTCGGCCTGGGCGATCGTGCCCGGAATTTCCAGCGCTCCCGGGACTTCGACAATGTCAAAAGCAAAGCCCTTGGCCTCAATGGCCTCGCGCGCGCCCTTGATCAGGCCATCGGCGATGTCGCGATAGAAAGTGCCCGCGATGATGAGATATTTTGGCGCGCTCATGCGTCACCCTCCGGAAAATGCCGCTCTTCGCGGATGGAAAGACCATAGCCGTCCAGGCCAACAATCGTTTGCGGCTTGGTAGACAGGAGCACCATGTCGCGCACCCCCAGATCCAGCAGGATTTGCGCACCAACACCATATTCGCGCAAGCGGCGAGCTTCCCGTTCGTCCTGGGCCAGAACAGGATGAGCGCCAAGGCGTTCCATGATGGCGGTATGGGAGGTCTCGCGAATGAAGACCATCACCGCCGGCCCGTCCGCGTCGGAAATTGCGCGTATACCGGCTTCGACCAGGGCGCCACGCGGTCCGCTCTCGTGCAGGACATCATCGACGAAGCTGACCTTGTGCATGCGCACAGTAGTTGGCTCGGACGCGTTCGGTTGCCCCTTGACCAGGGCGACATGCTCGGACCCGTCCAGGGTATTGCGGAAGACGACGAGCTTGAACGGCCCCCCGAATTGCGAGGAAAACTCGCTTTCGATCCGGCGCTCGATGAAGCGGTCATTCTTGCGGCGATAGGCGATCAGGTCGGCAATCGTGCCGATCTTCAGACCGTGCAACTGGGCAAAGGCGACCAGATCAGGCAGGCGCGCCATCGAGCCGTCCTCATTCATGATCTCGCAGATCACACCGGCCGAGCCGGCACCGGCCAGGCGCGCCACATCGACCGAGGCTTCGGTGTGTCCGGCCCGAACCAGCACGCCGCCATCGCGGGCGACCAGCGGGAAGACATGGCCCGGTGTCGCGATATCATCAGCGCCCTTGGACGGATCCGTCGCGACCTCGATGGTGCGGGCCCGGTCATGGGCGGAAATGCCGGTGGTGACGCCTTCACGGGCTTCGATCGAGGTGGTGAAAGCGGTCTGGTGGCGGGACCGGTTGTCACTGGACATCAGCTTGAGATCGAGCTGTTCGACCCGCTCCTGGCTCATCGCCAGGCAGATCAGGCCACGGCCATGCTTGGCCATGAAATTGACTGCATCCGGTGTGGCGAACTTGGCCGGGATGACCAGGTCGCCTTCATTCTCGCGGTCTTCCGCGTCGACGAGGATGAACATGCGCCCATTGCGCGCATCCTCGATGACGTCCTCGATGGGGGAAAGTGGGATGTCGCTCACGCGCGTCTCCAGAAATCAGGTCGGCGAGAATTCGCTCAGACGGGCGGCGTAGCGCGCCATGAGGTCAACCTCAAGATTGACGTGTGCGCCAATTTGCAGCGCGCCCAGCGTCGTCACGTCGGCAGTATGGGGAATGATCATCAGGTCGAAGGTCTCGTCAGTCACGCCATTGACCGTCAGCGACACGCCATCGACAGTGATCGAACCCTTGCGGGCAATGAATTTGTTGAGCGTTGCCGGTGGCTTCACCGTCAGCACGATCCAATCGCCGTCATCACGGCGGCCGACAAGCTCGCCAATGCCGTCGACATGGCCGGTGACCAGGTGCCCGCCAAGTTCCTCACCCAATGCCAGGGCGCGCTCAAGATTGATCGCATCACCTTCGCGCCAGCTGCCCAGCGTGGTCAGCGACAGCGTTTCCGGCGAGACGTCTACCGCAAACCAGCACCCCTCACCGGTCCGGCCCTTCCCGACAACCGTAAGACAGGCGCCAGCATGGGCGATCGACGCGCCCATAGCGATCCCGTCCGGGTCATAGGGAGCTTCGATCTCGAAACGCCGCTGGCTGTCGCCGCTGATTGAACGGACCCGGCCCTTGGCAGTGACAATTCCGGTAAACATCAGCGGTTCCGTTCGTATGTTTCCTGCAGGTCGGCGCCCCGTTCGATCACGCCCACCCGTCTGAAGATGGGCGCCTTGTCGAGCGTCTCAAGGCCCAGCGCTGCAAGTGCCGGCAAACCGTCACCGCCCAGCACCATCGGGGCGCGGAACCATTCGATCCGGTCGACCAACCCAGCCTGGATGGCAGCAGCAGCAATCCTGGCCCCCGCCTCGATCATGACCCGCTCGCAGCCTTTCATGGCGCGTTCCAGATCACGATGCGGGATCAGGGTGACCGATCGATCTCCGCCCTTGAACACCTGTGCCGTGGCCGGCGTGCGGCCCTGACTGTCCATGATGATCACATCAGGTTGGCGCTCGCAGCCGCCCTCGGGTCGCGCTGTCAGGCGCGGATCATCGGCGAGGATGGTGCCGATCCCGGTCAAAACAGCGTCATGGGCGGCGCGCATGCGGTGGACAACAGCACGGCTCTCCGGCCCGGTGATCCATTGCGACACGCCATTGGCGAGCGCAATCTTCCCGTCGAGCGAGGTAGCCAGCTTCAGCGTGACAAGCGGACGCGCCGCGCCACTCATCCGTCGTCGTCTTCGCGAGGACCGAAATGGGCCGTCAGAGCTTCATCGGTGATGAATTCGCGGAAGTCTTCGACCTTGTGGAAGTCCTTGTACACCGAGGCATACCGGACATAGGCGACGGCATCGAGATTCTTCAGCCCCTCCATCACCAGCTCGCCGACACGGTCGGAGGTGACATCGGTTTCGCCCGTCGATTCGAGACGCCGCACGATGCCGGAGATCATCTGGTCGATCCGGTCGGGCTCGATATTGCGCTTTTGCATGGCGAGCTGGATCGAGCGATTGAGCTTTTCGCGGTCAAATGGAACCCGGCGCCCGGATTTCTTCATCACCGTCAGCTCGCGAAGTTGCACGCGCTCGAACGTGGTGAAACGGGCGGCGCAGGACGGACATTGCCGCCGACGCCGGATGGCATTCCCGTCCTCGGCAGGACGGGAATCTTTCACTTGGGTGTCGGGATGACCGCAAAAAGGACAACGCATGCCGGTATCTTAGGCCAGTTCGGGATAGATGGGGAAGCGTGCAGTTAACGCCTTCACCTGCTCGCGCACTTCGGCCTCCACTTCTGCATCGCCATCAGGCTGGTCCACCAAAGCATCCAGCACGCGGACCATCAGCTCGCCAACCAGGGTAAATTCAGCGACACCGAAACCGCGTGTTGTCGCGGCCGGGGACCCGACACGGAGGCCGGAGGTGACGGTCGGCTTTTCCGGATCGAAGGGAACGCCATTCTTGTTGCAGGTGATAAAGGCTCGCTCGAGCGCCTGTTCCGCCGAATTGCCCTTCAACCCTTTCGGGCGCAGGTCGACCAGCGCCAGATGACTGTCGGTGCCGCCTGAAACAATGGCATAGCCGCCATCCGTGATGGCTTTCGACAGGGCCTGGCAATTTGCCACGACACGGGTGACGTAATCCTTGAACTCCGGCTGCAGGGCTTCACCGAAGGCGACCGCCTTGCCGGCAATCACATGCATCAGCGGGCCGCCCTGAAGACCCGGGAAGATGGCTGAATTGAACTTCTTGCCGAGATCAGGATCATTGGAGAGGATCATGCCGCCGCGCGGCCCACGCAGGGTCTTGTGCGTGGTCGTGGTGCAAACATGCGCATGTGGCATCGGATTAGGGTAGACACCCCCCGCCACCAATCCCGCGACATGGGCCATGTCGACCATGAGATACGCGCCGACCTCATCCGCGATCTTGCGGAATTCGGCAAAATCGATCTCGCGCGGATAGGCCGACCCGCCGGCAATGATCAGCTGCGGCTTGACCTCGATCGCCTTGGCCCGAACAGCATCATAATCGATCCGGGCGTCGCTTTCGCGGACACCATAGCTCTCGGCCTTGAACCATTTGCCCGACATGTTCGGCCGGGCACCGTGGGTCAGGTGACCGCCGGCGTCGAGCGACATGCCCAGGATCGTGTCGCCCGGCTTCAACAGCGCCAGAAAGACACCCTGATTGGCCTGACTACCGGAATTGGGCTGGACGTTGGCATACTGGGCGCCGAACAGCGCCTTGGCCCGCTCGATGGCCAGGGTCTCGACCACATCGACATACTCGCAACCGCCATAATAACGACGACCGGGATAGCCTTCGGCATACTTGTTGGTGAGTGGAGAACCCTGCGCTTCCAGCACCGCCCGGGACACGATGTTTTCCGACGCGATCAACTCGATCTGGTTTTGCTGACGATTGATTTCCTCGTGGATGGCATGAGCCACCTCGCGATCACTCTCAACAATGGAGCGGGTGAAGAATGGGCTCTCGTTTCCGGCTTCGATCTGGGTATCAGGCATGACGCGTCCTCAGGTATTTTGACCTGTGTGATAAGGCGCTGCTCTGAGTGGGGCAAGCCGACAATTAGCGACAACGCAGATAGCGGCATATCGGGCCTGCGCCTGATGGCGTTTATTTGGCCAGTTCAGACTGTGCTGCTGCAAATTAAATATATTTGACTATGCACACTTGAACTCATGCTCAACACATAATACCGATCTGATCTTGCAATGATCAATGAAGTCACCATTTGTGACAAAAACAAGTCAGCGTTTCCTGAAAGGTTTGCCTCATGGCTGAAGACATGCTCCCCGACATCGACAAGGAAGAATTGCTGCGGATGACGACCGATGTCGTCGCGTCCTACCTGTCGCACAACTCCATGCCCGCCGATAATGTTCCTGACCTGATCCGGTCAGTTCATGCGACCATGAAGGAAGTCTCCGAATCCGAAGCCAAGCCGGAGCCGAAGACAAAACCGGCGGTTGCCCTGTCCAAGTCCGTCGCCGACGATTACATCGTCTGTTTGGAAGACGGCAAGAAACTGAAAATGCTGAAGCGCTATCTGCGCTCGCAATACAACATGTCTCCGGACGATTACCGCCGCAAATGGAACCTGCCATCGGACTATCCGATGGTCGCTCCGGCCTATTCGCGCAAGCGGTCGCAATTCGCCAAGGATATTGGCCTGGGACGCGGCAAGAAGGACGGCTGA

Protein sequences of DBSCAN-SWA_2

>NC_008347|1684379:1689616|1689193_1689616_+|WP_011643477.1|DBSCAN-SWA
MAEDMLPDIDKEELLRMTTDVVASYLSHNSMPADNVPDLIRSVHATMKEVSESEAKPEPKTKPAVALSKSVADDYIVCLEDGKKLKMLKRYLRSQYNMSPDDYRRKWNLPSDYPMVAPAYSRKRSQFAKDIGLGRGKKDG
>NC_008347|1684379:1689616|1684804_1685866_-|WP_150099844.1|DBSCAN-SWA
MFILVDAEDRENEGDLVIPAKFATPDAVNFMAKHGRGLICLAMSQERVEQLDLKLMSSDNRSRHQTAFTTSIEAREGVTTGISAHDRARTIEVATDPSKGADDIATPGHVFPLVARDGGVLVRAGHTEASVDVARLAGAGSAGVICEIMNEDGSMARLPDLVAFAQLHGLKIGTIADLIAYRRKNDRFIERRIESEFSSQFGGPFKLVVFRNTLDGSEHVALVKGQPNASEPTTVRMHKVSFVDDVLHESGPRGALVEAGIRAISDADGPAVMVFIRETSHTAIMERLGAHPVLAQDEREARRLREYGVGAQILLDLGVRDMVLLSTKPQTIVGLDGYGLSIREERHFPEGDA
>NC_008347|1684379:1689616|1686546_1687122_-|WP_011643474.1|DBSCAN-SWA
MSGAARPLVTLKLATSLDGKIALANGVSQWITGPESRAVVHRMRAAHDAVLTGIGTILADDPRLTARPEGGCERQPDVIIMDSQGRTPATAQVFKGGDRSVTLIPHRDLERAMKGCERVMIEAGARIAAAAIQAGLVDRIEWFRAPMVLGGDGLPALAALGLETLDKAPIFRRVGVIERGADLQETYERNR
>NC_008347|1684379:1689616|1687613_1688921_-|WP_011643476.1|DBSCAN-SWA
MPDTQIEAGNESPFFTRSIVESDREVAHAIHEEINRQQNQIELIASENIVSRAVLEAQGSPLTNKYAEGYPGRRYYGGCEYVDVVETLAIERAKALFGAQYANVQPNSGSQANQGVFLALLKPGDTILGMSLDAGGHLTHGARPNMSGKWFKAESYGVRESDARIDYDAVRAKAIEVKPQLIIAGGSAYPREIDFAEFRKIADEVGAYLMVDMAHVAGLVAGGVYPNPMPHAHVCTTTTHKTLRGPRGGMILSNDPDLGKKFNSAIFPGLQGGPLMHVIAGKAVAFGEALQPEFKDYVTRVVANCQALSKAITDGGYAIVSGGTDSHLALVDLRPKGLKGNSAEQALERAFITCNKNGVPFDPEKPTVTSGLRVGSPAATTRGFGVAEFTLVGELMVRVLDALVDQPDGDAEVEAEVREQVKALTARFPIYPELA
>NC_008347|1684379:1689616|1684379_1684808_-|WP_011643471.1|DBSCAN-SWA
MSAPKYLIIAGTFYRDIADGLIKGAREAIEAKGFAFDIVEVPGALEIPGTIAQAEKAGAGYDGYVALGCVIRGETTHYDYVCGESARGIMDLNLKAIPVGNGILTVENRAQALKRAIDKNKGADAANAAMMLIELRNRFRSA
>NC_008347|1684379:1689616|1687118_1687604_-|WP_011643475.1|DBSCAN-SWA
MRCPFCGHPDTQVKDSRPAEDGNAIRRRRQCPSCAARFTTFERVQLRELTVMKKSGRRVPFDREKLNRSIQLAMQKRNIEPDRIDQMISGIVRRLESTGETDVTSDRVGELVMEGLKNLDAVAYVRYASVYKDFHKVEDFREFITDEALTAHFGPREDDDG
>NC_008347|1684379:1689616|1685941_1686547_-|WP_011643473.1|DBSCAN-SWA
MFTGIVTAKGRVRSISGDSQRRFEIEAPYDPDGIAMGASIAHAGACLTVVGKGRTGEGCWFAVDVSPETLSLTTLGSWREGDAINLERALALGEELGGHLVTGHVDGIGELVGRRDDGDWIVLTVKPPATLNKFIARKGSITVDGVSLTVNGVTDETFDLMIIPHTADVTTLGALQIGAHVNLEVDLMARYAARLSEFSPT

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011643471.1|1684379_1684808_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	4.6e-13	39.6
WP_150099844.1|1684804_1685866_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.2e-57	40.9
WP_011643473.1|1685941_1686547_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	7.5e-25	37.2
WP_011643474.1|1686546_1687122_-	RibD family protein	A0A2I2L4R9	Orpheovirus	2.2e-10	47.1
WP_011643475.1|1687118_1687604_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_011643476.1|1687613_1688921_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	7.6e-99	52.6
WP_011643477.1|1689193_1689616_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	3.7e-23	45.5

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NC_008347|2072401:2079382|DBSCAN-SWA
CATGGCTTTCACCCTGCCCGATCTGCCCTACGCCAAGGATGCGCTGGCCCCCCATATCTCCTCCCAGACGCTCGATTTCCACCACGGGAAGCATCACAACGCCTATGTCGGCAAGCTGAACGGTCTGGTCGAGGGCACCGATCTGGCCGCCCTGTCCCTGGAAGACGTGATCAAGAAGACCGCCGGTAACAGCGCCAAGGCGGGTATTTTCAACAATGCCGCCCAGATCTGGAACCACACCTTCTACTGGCAGTCCATGCGCCCCAATGGTGGTGGAGCCCCGTCTGGCGACCTCGCCGCGATGATCGACCGTGACTTCGGATCGCTGGACGCCTTCAAGACAGCTTTTGCCGATGCCGGCGCAACGCAGTTCGGCTCCGGCTGGGCCTGGCTGGTTCTGGCCGGTGGCAAGCTGGAAGTCCGCAAGACGCTGAACGCCGAGACACCGCTCACCGAGGATGGCGTCACGCCGTTGCTGACCATGGATGTCTGGGAGCACGCCTACTATCTCGACTTCCAGAACCGTCGCCCGGACTACATCACGACCTTCCTCGACAAGCTCGTGAACTGGGAATTTGCGGCTGAAAACCTCGCCGCAGCCCAATAAGGCTCTCGTCAGAGCGCCGCTCGCGTCCTAACCTTCCCCTCGGTCGATAAACACATATCCCGAAGGGAAGGTTAGATGGCGTTCAAACAAGCCATGGCAGCGCTCGCGCTGGTCTCGACGGCCATGCTGGCCGTCACTGCGCCGCTCCAGGCGCAAGACATCCAGACTGTCGAAAACCCCGCGGCGCTGGGCTTTGATCCGGCTGCACTTTCTGCACTCGATGCTCGCCTGGACGCGTTGGCGACAGAAGGTGCGCGCCCCGGCTATGCGGCAATCATCGCCCGCGGTGACCGTATCGCCTACACATCCGAGGCTGGCGAAGCCGACCTTACCAATCACATACCTTTCACCGTCGACACCCCGGTCCGCATCGCCTCGATGACCAAGCCGGTCACGGCCATGGCCATCATGATGCTGGTCGAGCGCGGCGAGATATCCCTGGACGATCCGGTCAGCGACTACATTCCGGCCTTCGCCGATGTCCGTGTCGCCGTCTCGCCGATGGCCAATGAGGCCGGCGAAATCGAGACCCGCGCCCCCGATGCCGTGATGACCATCGAGCACCTGCTCACCCATACGGCAGGGCTTGGCTATATCTTCGAGGCCGAGAGCGATCTCGGTCAGCTCTATCTGGAGAATTCGCTCTATTCCGGCGAGGGTGACCTTGCCGCCCGCATCGACCGCCTTGCCGCCCTGCCGCTCTACAATGATCCCGGCGATGTCTGGCAGTATTCCTACGGGCTGGACGTGGCCGGACGGGTCATCGAGGTGGTCAGCGGCATGCCGCTCAACACCTTCCTGGAAAGCGAGATCTTCACGCCGCTGGGCATGAACTCGACCGGTTTCTTTTTCAGCGATGTCGATTTCGATGAAGCCGGGCTGGCGCCGCTCTATGTGCATGATGAGAACGGCAGCATGGTCTATTACGAGTTCGGCAGTCCGGACTGGCCGTCCGGCGGCGGCGGACTGGTCTCGACGGCGTCGGACTATATCCGCTTTGCGATGTTGCTCGCCAATGGCGGCGCGCTGGGCGATGTCCAGCTGATCACGCCGGAGACCTTTGCCATCCTCGCCAGGCCGCACGTCACGGCCGACCAGACCGGCGACTGGGGTGGTCGCAGCTTCGCACTGGGCATGGATGTCGTCCTGCCACCGGTTGAAGACCAGCAGCCGGCCGGTGTGCCGGGCGATCTCAGCTGGGGCGGATTTTTCGACACCGATTTCTTCGTCAGCCCGGCGACGGGTACGGCAGCGGTGATCATGACCCAGATCCAGCCGTCCCAATACCGGCCCGAGCCGCGCACGCTGCGGATTTTCCGGCCGATGGTGTATGCCAGTTTCGCCTTCGACTGACGCCTGAAAATATTTTTCAGGCACGGGCGACGGAAAGGCGCTGCCAGGTGCGTTACAGACAGGCAACGGGCCGCAACCCCTCCCTACCTCGCGGGCTCGGATGCTCACGTACCCCCCGAACGTGAACAGGGCCCGCCGGTTATCGGCGGGCCCTGAACGTTTCAGGTCAACATTGGCGGCCTTGTGCTAGCCAAAGACCGTCTGCGCCATGGCCATCGCGATCAGCATCGGGAAGGACAAGAGCGTGTTGGTGCGCGAGAACAGCATCGCCGTGCGGGCTGCTTTCGGCTTGGCGTCGGCCTCGGCCTCGACCATGCCCAGCGCGATTTTCTGGTTGGGCCAGATCACGAACCAGACATTGGCCGCCATGATGATCGCCAGCCACATGCCGATACCGATGAAGGAATACTGCGGCGAGTAAACATCAGCCGCCAAGCCAAGGCTCAGTACTTCCATCGAGTAACCCCGCAGCCCGGCAACCGTCAGGCCCGTCAGGACCGTGAAGGCCGCACCCCATCGGAACCAGAACAGGGCAGCCGGCGCGATTACCTTGCCGATGGCCGGTTTCTGGTCATCCGGAATATTGGGCATGTTCGGAATCTGCACGAAGTTGAAGTACCAGAGCAGTCCGATCCACATGATGCCGGAGACCACATGGGTCCAGCGGGCAAATGCCTGCCAGAAAGCACCGTCAAGCGCGATTCCGCCGGTTGCCACATAGGCGCACAGATAAATCGCGCTGAGTACGAAAGACACGATCACAGTCGTGCGTAGATTGCTGAGAATTGCAGCCATTATAATCCCTCCCCAATGTCAGAATCAGTCTGTCATCGGGGAGAAATTACGGCTTATTCGCGTCTCAGGATAGTCCGGCCGGGTTTGCACCCGGCCGGACCTGATCAGCTGTCATTGCTTTCGCGCTGGACATTGGTGAACAAGAGGATCGGCGCGGCGACGAAGATCGACGAGAAGGTACCGATCATCACGCCCCAGATCATCGCGAAGGCGAAGCCCTTCAGGGCCGTGCCACCGATCAGGTAGAGCGAGATCAGCGCCACCAGCGTCGTCACGGAGGTCAGGATGGTCCGTGACAGCGTGTCATTGATCGACAGGTCGAGGACTTCCTGAAGCGGCTTGCGCTTGTACTTGCGCAGGTTTTCGCGGATCCGGTCATAGACCACCACGGTGTCGTTCATCGAGTAGCCGACAATGGTCAGGATGGCCGCGACCGTGGCCAGGTCAAACGTCATCTGGGTCAGCGAGAACATGCCGATCGTGGCGATGACGTCATGGGTCAGGGCGACAATGGCGCCAACCGAATACTGCCACTCGAAGCGGAACCAGATGTAGACCAGCATCAGGAAGAGCGCGATACCAATGGCAGTAAATCCGGTCACGATCAGCTCGCCCGAGACGGCGCCGCCGATCACTGTCGTGCCGCGCATCTGGATATCCGGGAAGGTCGTCGTCAGTGCCGCTTCCAGCGCCTGTCGAGCCGTGTTCTGCGCCGCTTCACCTTCCAGCCCCTCGCCCGCCTGCAGCGGCAGGGAGATGAGATAGGTGGTGCGGTCATCGCCGACCGAGCCGGCGCCCTGGACGCGCGCCTCCCCGAGATCGAGGCCGTTCGCGGTTGACCGCAGATCCTCGATCGAGGTGGTGTTCAGCGCCGTGACTTCGGTCTGGATACCACCGCGAAAATCAATGCCGAAATTGATGCCGACGGTGGCGAACTCGAACATCGAGAACAGGATGAACAGGCCGGATACCGCGAGGGCGATCCAGCGAGCGCGGATGAAGGGGATCTTGCCGGAGGTCGGCAGGTATTTGACGAGTGCGAGGGTCATGTTCGTTTCCTCCCCTTAAAGCGGCAGCTTTTTGGGCTTGAACGCCCGCAACCAGAGAACCGCCAGGAGGCGGGAGACGACGAAGGCCGTAAAGACCGAGGTGATGATGCCGATACCCAGCGTCACCGCGAAACCCCGCACCGGACCGGCACCGAGCATGTAGAGCACGGCAGCAGCGATGAAGGTGGTGATATTGGCGTCGAGAATGGCCGCCAAGGCTCGCTCGTAGCCAGCCTGTAGAGCCTGCACCGGGGTGCGATTGTTCAACACCTCCTCGCGGATCCGCTCATAGATCAGCACATTGGCGTCCACCGCCATGCCGATCGTCAGGATGATACCGGCAATACCCGGCAGGGTCAGCGTCATGCCAAGCCCCGACAGGCCGCCCAGGATGAGGACGACATTGACCAGAAGCGCCATGGTCGAGAACAGGCCGAACACGCCATACATGGCAACCATGAAGACGATGACCAGGGCGAAACCGATCATGATGGCCAGCTTGCCGCTTTCCACCTGGTCCTGACCCAGCGTACCGGTAACGACCCGTTGCTCGACCGGCGTCAGCGAGGCCGGCAGGGCACCGGCATTGAGCAGGATCACGAGCTGGTTGGCCGTCTCATAGGTGTAGCTGCCGCCGATCACCCCGGACCCTGACAGGATCGGTTCGTTGATCGTCGGTGCGGTGATGATTTCATTGTCGAGCACAATGGCAAAACGACGGCCACGATTGGCCCGGGTCAGCTCGCCGAAAATCAGGGCGCCCTGCGTGTCGAGCCGGAAGCCGACCACGGGTCCCACATAGCTCGGATGGGTTGTGACATTGGAACTGTTGAGGTTCTCACCGGTCAGGCGCTGGCGTGTCTCGACGGCCAGCCATTGGGTGCCGCCGGTATCGGCCATCGGATAGACCGTCACGCCCGGCGGTGTACGTGCCTGGCCATTGGGGCCCGGATCGACATTCTCGTCGACCATGTGGAAGCTCATCGCCGCCTGTGTTCCGACCAGGTCGATGATCTCCTGCGGATCATCGGCACCCGGCACCTGCACCAGGACCCGGCGGTCGCCGGAGCGGGCGATGGTCGGGTCGGTGGTGCCCAGCCCGTCGAGACGGCGACGGATCACCGTGATCGACTGTTCCAGTGTGCGGTTGCGGATGGATTCATACTGCTGCGAGGTCACCGAGATCCGGATCGCCGACGGGTCAGACGGGTCCGCACCGATATCATACATGTTGGACAGACCGACCTGACCGATCCCGGTGGTGACCGGCGCATTGAGCTCACGGATCCGCTCCAGCGCAGTATCGCGCTCTTCCGGGCGGACCAGCAGAACGACGACTTCATCCCCGATTACAGCGACCGAGCGGGCCAGAACCGGCGGCGCATCGCGCAGCGTGGTGCGGATGTCGGAGGCCAGCGTTTCCAGCTGGGCGTCGCGCACCTCGTCCATGTCGACCTCAAAGACGATGTGCGAACCGCCCTGCAGGTCGAGGCCCAGATTGATCGTCCCGGCCGGGATGAAACGCCAGATGCCCTTGGGCGTCGCCGTACCATCCACCTCATTGATCGTGAACCGGTCTTCTTCCGGCACGAAATTGGGAATGGTGTACATCACGCCGAGCAGCGTGATGAGGAATATGGAAAGCAGTTTCCAACGCCCGAAATGCAGCATGTCAGCGCGGCCTCTTGGTCAGGGACGATCAGGGACGATCAGGGATGACGGGCAATCGGCTCAGCCGATTTCCTTGTCGTCCTTCTTGGCGTCTTTCTTGGTATCCGACTTGGCGTCATTGGCCGGCTTGGGCGCGGTGCGGCCCTTCACATCGGCAATGGTCGAGCGGACGATACGGACTTTCACGCCTTCACCGATGTCGAGGGTGACTTCCTCGTCGGAGACCTTGGCGATCTTGCCGATCATGCCGCCCTGGGTGATGACTTCGTCACCGCGCTTGAGGCCGCCAATCAGTTCCTTGTGCTCTTTCATCCGCTTTTGTTGCGGACGGATGAGCAGGAAATAGAAGACCAGGCCCATGAGGACGAGCATCGGGATCGGGGATTGAAGAAATTCTTGCATGAAGAAGCGCGCTCCGCGGCTGCTGGGTGCGTAACGCAACATGATTGCGTCGGCGCCCGGAAATTCGAATGCGCGGGACTATATCGGCACGGGCCTTGGTTGCAACAAGGGTCGGCTGTTGGATCAGGCTGCATCTGTGTGCGCAAAGGCACACCCGGCCCATCCGCGGTCAGCGCAGATAGGACATCGGGTCGACCGGGTTCACACCGGAGCGGATCTCGAAATGGACCTGCGGGCGGTCCACCGTACCGGTCGCACCGGCCTGGGCGATGACCTGGCCGCGGCTGACCTGGTCGCCTTCGCGCACCAGAAGCCGGGAATTATGGGCATAGGCCGTTACAAAGCCGCCGGAATGGCGGACCAGTACCAGCTGGCCATAGCCGGCCAGCTCGCTGCCGGCATAGACAACCTGGCCAGGCGCCGACGCGCGCACATCGGCACCGGCGGCCGCTTCGATATTGATACCGTCATTGCGCTCGCCATTGGGACGACGACCGAAACTGGCCAGGACCGAACCGCGAACCGGCCAGTCAAAGCTGGGCGCTCCGGCCTCGGCCGGCGGCGGCGTATAGCGGTCCCTGTTCGACGATGTCGTTGGTGCGCGCGAAGACCCACCCGACGATGTACTGGCGACCCGGGCGCCATTGGGCAGGCGAATTTGTTGCCCGACCTCGATCTCGAACGGTGCGCCGATGCCATTATGATTGGCAAGCTGCTGGAAAGGCACGCCATATCGCAGGCCTATCCGGTACAGATTCTCGCCACGCTGGACCACATGAACCGGCGGCCGCGGCATCGAAATGGTCTGCCCGACGCGCAGCGTATAGGGCGCATTGAGACCATTGGTGCTGGCCAGGTCCGACATGCCGACGCCGCAACGCTCGGCAATCTCGGACAGGGTGTCATTGGTCCGCACGGTATAGCCGGAGCCACAATTCATCGTGCCGCGTTGGGGTGAACGCGAGGACGACGAAGACGAAGATGTGTTGGATCCATTGCCGAAACTGCGATAGTCGACCCGGGCCGGCTCACGCGGATTGGTCGCACAGGCCGCAAGGCTCGCACTCACCACCGCAACGAGGCAGATCAGGGACGTGACACGCAT

Protein sequences of DBSCAN-SWA_3

>NC_008347|2072401:2079382|2077935_2078319_-|WP_041636921.1|DBSCAN-SWA
MLRYAPSSRGARFFMQEFLQSPIPMLVLMGLVFYFLLIRPQQKRMKEHKELIGGLKRGDEVITQGGMIGKIAKVSDEEVTLDIGEGVKVRIVRSTIADVKGRTAPKPANDAKSDTKKDAKKDDKEIG
>NC_008347|2072401:2079382|2072401_2073007_+|WP_011643832.1|DBSCAN-SWA
MAFTLPDLPYAKDALAPHISSQTLDFHHGKHHNAYVGKLNGLVEGTDLAALSLEDVIKKTAGNSAKAGIFNNAAQIWNHTFYWQSMRPNGGGAPSGDLAAMIDRDFGSLDAFKTAFADAGATQFGSGWAWLVLAGGKLEVRKTLNAETPLTEDGVTPLLTMDVWEHAYYLDFQNRRPDYITTFLDKLVNWEFAAENLAAAQ
>NC_008347|2072401:2079382|2078446_2079382_-|WP_190273911.1|DBSCAN-SWA
MRVTSLICLVAVVSASLAACATNPREPARVDYRSFGNGSNTSSSSSSSRSPQRGTMNCGSGYTVRTNDTLSEIAERCGVGMSDLASTNGLNAPYTLRVGQTISMPRPPVHVVQRGENLYRIGLRYGVPFQQLANHNGIGAPFEIEVGQQIRLPNGARVASTSSGGSSRAPTTSSNRDRYTPPPAEAGAPSFDWPVRGSVLASFGRRPNGERNDGINIEAAAGADVRASAPGQVVYAGSELAGYGQLVLVRHSGGFVTAYAHNSRLLVREGDQVSRGQVIAQAGATGTVDRPQVHFEIRSGVNPVDPMSYLR
>NC_008347|2072401:2079382|2076219_2077875_-|WP_011643836.1|DBSCAN-SWA
MLHFGRWKLLSIFLITLLGVMYTIPNFVPEEDRFTINEVDGTATPKGIWRFIPAGTINLGLDLQGGSHIVFEVDMDEVRDAQLETLASDIRTTLRDAPPVLARSVAVIGDEVVVLLVRPEERDTALERIRELNAPVTTGIGQVGLSNMYDIGADPSDPSAIRISVTSQQYESIRNRTLEQSITVIRRRLDGLGTTDPTIARSGDRRVLVQVPGADDPQEIIDLVGTQAAMSFHMVDENVDPGPNGQARTPPGVTVYPMADTGGTQWLAVETRQRLTGENLNSSNVTTHPSYVGPVVGFRLDTQGALIFGELTRANRGRRFAIVLDNEIITAPTINEPILSGSGVIGGSYTYETANQLVILLNAGALPASLTPVEQRVVTGTLGQDQVESGKLAIMIGFALVIVFMVAMYGVFGLFSTMALLVNVVLILGGLSGLGMTLTLPGIAGIILTIGMAVDANVLIYERIREEVLNNRTPVQALQAGYERALAAILDANITTFIAAAVLYMLGAGPVRGFAVTLGIGIITSVFTAFVVSRLLAVLWLRAFKPKKLPL
>NC_008347|2072401:2079382|2073082_2074360_+|WP_011643833.1|DBSCAN-SWA
MAFKQAMAALALVSTAMLAVTAPLQAQDIQTVENPAALGFDPAALSALDARLDALATEGARPGYAAIIARGDRIAYTSEAGEADLTNHIPFTVDTPVRIASMTKPVTAMAIMMLVERGEISLDDPVSDYIPAFADVRVAVSPMANEAGEIETRAPDAVMTIEHLLTHTAGLGYIFEAESDLGQLYLENSLYSGEGDLAARIDRLAALPLYNDPGDVWQYSYGLDVAGRVIEVVSGMPLNTFLESEIFTPLGMNSTGFFFSDVDFDEAGLAPLYVHDENGSMVYYEFGSPDWPSGGGGLVSTASDYIRFAMLLANGGALGDVQLITPETFAILARPHVTADQTGDWGGRSFALGMDVVLPPVEDQQPAGVPGDLSWGGFFDTDFFVSPATGTAAVIMTQIQPSQYRPEPRTLRIFRPMVYASFAFD
>NC_008347|2072401:2079382|2074546_2075155_-|WP_011643834.1|DBSCAN-SWA
MAAILSNLRTTVIVSFVLSAIYLCAYVATGGIALDGAFWQAFARWTHVVSGIMWIGLLWYFNFVQIPNMPNIPDDQKPAIGKVIAPAALFWFRWGAAFTVLTGLTVAGLRGYSMEVLSLGLAADVYSPQYSFIGIGMWLAIIMAANVWFVIWPNQKIALGMVEAEADAKPKAARTAMLFSRTNTLLSFPMLIAMAMAQTVFG
>NC_008347|2072401:2079382|2075259_2076204_-|WP_011643835.1|DBSCAN-SWA
MTLALVKYLPTSGKIPFIRARWIALAVSGLFILFSMFEFATVGINFGIDFRGGIQTEVTALNTTSIEDLRSTANGLDLGEARVQGAGSVGDDRTTYLISLPLQAGEGLEGEAAQNTARQALEAALTTTFPDIQMRGTTVIGGAVSGELIVTGFTAIGIALFLMLVYIWFRFEWQYSVGAIVALTHDVIATIGMFSLTQMTFDLATVAAILTIVGYSMNDTVVVYDRIRENLRKYKRKPLQEVLDLSINDTLSRTILTSVTTLVALISLYLIGGTALKGFAFAMIWGVMIGTFSSIFVAAPILLFTNVQRESNDS

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011643832.1|2072401_2073007_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	5.0e-45	44.9
WP_011643833.1|2073082_2074360_+	serine hydrolase	A0A218M8S6	Mycobacterium_phage	6.4e-10	24.7
WP_011643834.1|2074546_2075155_-	urate hydroxylase PuuD	A0A1B1IVR4	uncultured_Mediterranean_phage	3.2e-52	53.7
WP_011643835.1|2075259_2076204_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	2.0e-56	48.5
WP_011643836.1|2076219_2077875_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_041636921.1|2077935_2078319_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	4.9e-14	48.8
WP_190273911.1|2078446_2079382_-	M23 family metallopeptidase	Q8SBN9	Clostridium_phage	9.5e-19	36.6

Sequences of DBSCAN-SWA_4

Nucleotide sequences of DBSCAN-SWA_4

>NC_008347|2087771:2096052|DBSCAN-SWA
CTCAGCCTTCGATACGCTCAACACCGCCCATATAGGGACGCAGCGCGGCGGGGATGGTGATCGACCCGTCCTCATTCTGGTGGTTTTCCAGCACGGCAACGAGGGCGCGGCCGACGGCGACGCCTGAACCGTTGAGCGTGTGCAGGAAGGCGGGACGTTTTTCGCCCTCCTTGCGGAAACGGGCATCCATCCGGCGGGCCTGGAAATCGCCGCAGGTCGAGCAGGACGAGATCTCGCGATAGCAATCCTGGCTGGGCATCCAGACTTCCAGGTCATAGGTGCGGCGGGCGGCAAAACCCATATCACCGGTGCACAGCTTCATGACGCGGTAGGGCAATTCCAGCAACTGCAGCACCTTTTCGGCGCAACCGGTCATGCGCTCCAGCTCGGCATCGCTCTCGTCCGGCGTGACGATGGAGACCATTTCCACCTTCTGGAACTGGTGCAGGCGGATCATGCCGCGCGTGTCGCGACCGGCCGAGCCGGCTTCCGAACGGAAGCACGGTGTATAGGCCGTCATGCGCATCGGCAGGTCGGCCTCGGCGTGGATGGTCTCGCGGGCCAGATTGGTCAGCGGGACTTCAGCCGTGGGGATCAGCCAGTGATCATCCGTGGTGCGGAACAGGTCTTCGGCGAATTTCGGCAATTGGCCGGTTCCGAACACCGCCTCATCGCGCACCATGTAGGGCGGACTGACCTCTTCATAGCCGTGCTCGGTGGTGTGCAGATCCAGCATGAATTGCGCCAGCGCGCGCTCCAGACGAGCCAGCCCGCCACGCAGGGCGACAAAGCGCGAGCCCGAAATCTCGGCCGCTTTCTTGAAGTCCATCTGACCGAGGCTTTCACCCAGATCAACATGATCGCGCGGCGTGAACGCCATCGTCCGCGGCTCGCCCCAGCGGCGCTCTTCGACATTGTCGGCCTCGTCAGCCCCTTGCGGCACATCCGCATGCGGCAGGTTCGGCAGCGCTGCGAGGTGCTGGTTCAGAACCTCGTCGAAATGACGCGCCTGCTGACCGGACTCCTCGAGCACAGCCTTCAGGCGGTCGACTTCGCTGCGCAGGCGGTTGAACTCGGCCTCGTCGCCGCTGGCCTTGGCCTTGCCGATCTGTTTGGACAGCGCATTGCGCTCGGTCTCGGCATCCTGCTGCTTGCCCAGCGCTTCGCGGCGGGAGGCATCAAGCTCGATCAGGGTCGCGGATTGGGCCGGCAGTCCACGCATGGCGAGGCCAGCGTCGAATGCGTCGGGATTGTCGCGGATGAGCTTGATGTCATGCATGGGTCTGATCCGGTTGCAATGAAATAACGAGGCCGGGCTATAGCCCTGCCCGCGCGCGCCGTAAACCGGATCAGTCCTCTTGCGTGTCGTCCGCCCGGTCGTCGGAGGACTGCATGAGATGCATGCCGCCGATCGAGATGAAGTAGAGCAGCAGCAGCGCGCCGCCGAGCATGATCTGGGAAATCGGATCCGGCGGCGTGGCAAAGGCCGCAAACAGGGCAATCCCGACCACCGCAAAACGCCAGCCCTTCAGCAGGGTCTTCGCCTTGAGGATGCCGGCCTTGGCCAGCAGCATCAGGAAAACCGGCATCTGGAAGGAGATTCCGAAGACCAGCATCAGCGTGGTGATGAGGTTCATATAGTCGGAGACATTGAGCAGAAGCTCGATGCGCGTGCCGACCAGCTCGGCGGATTGCTCCTGCCCCAGCGAGAAACGCATCACCATGGGCAGGACCAGGAAGTAGACAAAGCTGACCCCCACCCCGAAGAGAACTGGCGACATGGCCAGGAAGGGGGCAAAGGCGCCGCGCTCATTCTTGTACAGGCCCGGTGCGACGAAGCCGTAAATCTGCCAGGCGATGACCGGGAAGATGATGATCACCGAGCCGACCAGGGAGAGTTTCAGCCGGACAAAGAAGAATTCCAGCGGGGCGAAGAAATTGGCCGTCAGGTCCAATTCCTCGACCGGGACACCGCGCACGATGGAGGCCGCATCCCGGTAAGGCAGCAGCAGCCACTGGTAGAGCGTCTCGGAAAAGATGAAGCAGCCGATGAAGCCGACCAGCAAAAATCCCATGATCACAACCAGGCGCGAGCGCAGCTCGATCAGGTGCTCGATCAGCGGCGCCCGGCTCGCCTCGACTTCATCATGCTCGATTTCAGCCATCCGGCTCAGCGTCCCTTGATTTCGTCGACCGGCTTGGCAGGCGTGGTTTCGACCGGCGCCGCCCGCTCTGTCTCATCCGCACTGGCAGCGGCGTCGGCTCGCGCGTCAGCTTCCGGCGTCGTGCTTTGCGGTCCTTCGCTGTCGAGGGCGGCCAGTTTCGCCGCCTTGGCGGCCTTGTCAGCGTCGGTTTCCGCCTGGTTCTGCTCGACATGTTTCAGCTTCAGGGCGCGAATGTCGTCGTCCTGCGTGCCGCGGGCCGCCTTGTCCAACTCACCATGGATCTGGTTTATCGGATTGGCCTGTTTGAGCGCGTCGATTTCACGACGCAGCTCGGACAGTTCGGTCTCACGGCCGATTTCCTCGAAACTGTTCTGGAAATCCTTCGCCATGGCGCGGGCCTGGGCCATCATCTGGCCGACCTTGCGCATCATGACAGGCAATTGCTGCGGACCGACCACGACCAGTGCGAGGACCAGGACCACCAGCAATTCCGGCATGCCGATGCCGGGGCTCATCGCCTAGCTCCCGGTCTTTTCGTCTTCGCGGGTCTCGGTGTTGAGCGCGCCGGTCGGCGTGTCGGATTCCGAAGTTTCGCTCTCGCCTTCATCATCCTTCAGCCCCTTGCGGAAGCTGGTAATGCCCTTGGCGAAATCGCCCATGACCGACGCGATCTTTCCGCGACCGCCAAACAGCAGCACCGCGAGAAGGACTACGAGAAGAATTTGCCACATGCCGGGAGCCATTTGCCCCTCCGTCTGAACCTTGCCAATTGGGTCTACTGCGTTTGCCGGGCCTCGTCCAACCCGTCAATCAGACAGCAGGACGATTGATCGCACGCGAACGGCTAGGTCGCTCCGTCCGGATCATCATCCCCATCCATGAAGTCGACATGGAAGGCATGGGCCTCCTCGTCACTGAGCGGGTCTTCCAGCAGGTCCGGTTCGACACTGCGCGACGGGTCCGGCACCGAAAAATCGGGCGGCAGGCGCGCATCGAGCAGGCCGGCGGCCTTCAGGTCGGACATGCCGGGCAGATCGCCGATCGATTGCAGGGAGAAATACTCCATGAATCCCTGGGTCGTGCCGTAGGTGACCGGGCGTCCCGGCGTGCGACGACGCCCGCGCGGCCGCACCCAGCGCAGCTCGAACAAAAGGTCGAGCGTGCCGCGCGACACGGCGACACCGCGGATTTCCTCGATCTCGGCACGCGTCACCGGCTGGTGATAGGCGATGATCGACAGGGTCTCCAGCGCCGCTTGCGACAGCTTTCGCGGCTCCTGCTTGACCTCGACCAGCACGTCGGCGAGATCCGGCGCGGTCTCGAACCGCCAGCGGCCGCCCACTTCGGACAGGTGCACGCCGCGTTCGGCATATTCATCACGCAACTTGCCCAGCAGGTCCTGGATGTTCGCTTCCAGTGGCAGGCGTCCGATAAGGGTTTCCTCGTCCAGCGGCTCGGCAGCCGCAAACAGCAAAGCCTCGAGGATGCGCAGATTGCGACGTTCGGTATTGACGGCGAGATGGACGCCCAGGGCTTCGGACGCTTCCGCATCGGCGGCGACATTGGGGCCCTGATGGGCGGCACGTTCGCGCAGGGCCGAGATCGCGCTGGTGATCGCGTCGGCCGGTTCGTCCGTTGTCGTTTCGTCAGTCATCTGTCGCGCCCTCTTCCCCCGAAAGCGACCGCACATACAGCGGCGCATAGGCTTCCTGCTGGCGCAATCGTGCATGGCCCTCCTTGGTGATTTCAAGTGCGGCCAGCATCGAACTGGCCCGCACCGAACGCATCGGAGGAGGGTTGGCGCCCAGCTCCCCGGCTCCGGGAAGCAGGCTGTCCAGGTCCCGCCAGTCACTGAGTTGCGGCATCAGTGTTTCAAGACGGTCCCTTGCAGTTTCCAGGCCATAAACCTTCGGCGTCGGGGGCCGGTAAACAGACTTGGCCTGCTTGACCCGGCGGCTGGAATAGGCCGACAGAAGATCGTGCAAATCGGCCTCATAGACCACCGACCGCGTCGCCCGAACGCCCTCCGGCATGCCGCGGACATGGATGTTGGTGGCCAGCAAGGGCCGCGCGAACAATGCATCGGCCGCCGCGCGCATGGCTTCCAGCCGGCGCAGTCGGAAAGCCAGCGCTGCCGCGAGCACTTCAGCGGGCTGGTCATCGTCTTCCTTGGGCGGCTTGGGCAGGAGGAGTTTCGATTTGAGAAAGGCCAGCCAGGCCGCCATCACAAGATAGTCGGCCGCCAGGTCGAGGCGCTTTTTCCGCGCCGCCTCCATGAACAGCAGATACTGGTCGGCCAGGTCGAGGATGGAGATCTTCGCAAGATCGATCTTGCGCTTGCGCGCCAGGGCGAGGAGCAGGTGAAGCGGTCCCCCGAATCCATCAAGGTCGACGACGAGCGCGTCGGTCTCGGCGTTCTCGGCGGCTTCAAACCGCACGTCTTCCTCGAAGTCCTCGCTCACCTCAATTCCTCGCTCAGGACACGACCTCGCTCAGCTTGCGACCTCGCTCAGGCTTTCTCCCCTTGGATCAACCTGGCGTGGACAGCGCGCCAGGATCAGGCGGGAAGCCTGTCCAGACAGTCATTGAGCCGCGATTCGGCATCGTCCGGGTCAAAATCCTCGATCACGTCGCGAATCCGCTCGGCCGCTTCGGCCCGTTCCAGCGCCCGGCCGGTCAGGGCTGTCGTTCCTTCGGCGACCCCGATCATCTCGGACATCTGGCCATTACAGTGCAAAAGCATGTCGCAGCCGGCCTTCAGGGACAGCTCGCCGCGCTCGCGGAATGTGCCGGTCAGAGCCTTCATCGACAGATCGTCTGTCATAAGCAGCCCATCAAACCCGATCTCGCCACGCACCACCTTGTCGACCATGTCTGCGGACTGGGTGGCAGGGAGGTCGCGGTCGATGTCGGAATAGACAATATGGGCCGTCATCGCCATCGGCGCATCATTTAGACCCTTGAAGGGTGCAAAATCCGTCTCAGACAACAGGCCATGCTCTTCCGGCACGACGGGCAGTTCGAGATGGCTGTCGGCCCGGGCCCGGCCATGTCCGGGGATATGCTTGATGATCGGCGCGACACCGCCTGCCATCAATCCATCCATGGCGGCGCGGCCCAGATGGATGACCGGTTCGGGCGTGGTGCCGAAAGCGCGGTCACCAATAATGTCGTCTGCCCCTTCGATCCGCAGATCGGCGACCGGGGCACAGTCGACATCGACACCGATGGTGCGCAGCTCGTGAGCCAGCAGGCGGTGATTGATGCGGGTCGCCTCGATCGCCAGCTCCTCATCGACTTGCCAGAGGTCGGCAAAGCGCTGGGCCGCAGGCGCGGCACGCCAGGTCGGAGGCCGCAGCCGGGCGACACGCCCGCCTTCCTGGTCGATCAGGATGGGCGCGTCGCGACCGACACAGTCGCGCAGCTCCAGTGTCAGACGGGAGACCTGGTTGATGCCCTCGATATTGCGGGCGAACAGGATGAAGCCCCACGGATCAATGTCGCGGAAAAAGGCTTTCTCGTCCGGGCTCAGCTTGGTGCCGGCCAGACCGTAGATCACGGATGCGATGGTCATCGGCGAGCCACCAGGCAGTCCTGGCCGCGGGACTGAAGCGTGGAGCAGAAGCTCACAGCATCACCCCGGTCGCCGAAAGCCGCGATGCGCAGCCGATGATAGGTGCCCCGTCCTTCAATCTCGACCGACGCCACGTCCGGCGCCATGCCCGACGAGATGTCGGAGAAACGGGTGCGGAAGGCGACCCACGCCGCCTCGGCGTCGGCTTCGGTACGGAAAGAGGCGATCTGGACCACCCAGCTTCCGGTCAAGTCCACCCCGGTGACCTGGCCTGATGGCGCAGCAGGTTCCGGAGCGGCCACGACCGGTTCGGGTGCAGGGTCCGGCTCACGGACCGGGCGCTGCGGTGCCTGGCGCGGCGTGGCATCGGGCAGTGTGTCAGTTTCGATCGGTGTATCCTGCGGCTGCGTGTTGGCCGCCGCATCGGCATCGACCTGTTCCACTCGCAGGGTCGGCCGGCCGCTGTCTTCCAGCGGCTCTTCCGGAGCCGGGCGCAGTGATACCGTGTCATCGGCCGCACCATCGCCGGTCAGCCGGTCATAGACTTCCAGTTCGGTATCCGGCGTCTCCGCGCCACCCGGATCGACCGGACGCTCGCGATAAGGCTCCTCATTGGGGACAAGCCGCGGCGCGCCATCACGACCGCTGTCACGCAGGCCCTGATTATAGGCACTCCACACCACGCCGAGGAACAGCACGAAGGCCGCCAGCGCCGTGGTCAGCAGCAACAACCCCCGACGGGCGTCCTCGTCGCGGGCGTCAAAAGTGGCGAACTCGTCAGCAGGCGGCGCGTAGGCCCCGATCCGGCTTTCCTCGTCTTGGTCTGTCATGGATCCCGGTTCTCACCCTTGCCCGGCGGTCACGCGAATCGCGACGCGCCTCAACACGATAACATTGCGGTCGATAAGGCTTTACCGCCGCGACACTCTAGAAATACCCCTGCACGGTGAAAAGCCGTCTGTGCTCTTCCACTGCAAAGCGATCCGTCATGCCGGCGATATAGTCGCAAACCGCGCGCGCTGTCTGCGCGGTACCGGCACCTGTCATGCCTGCCTGCACATCGCTGGGCAAGACACCCGGATCGGCCAGATACAGGTCAAACAGTTCGCCGGTCACCCGGCGCGCCTGGCTCATCATCCGGTTGACCTTGTAGTGCCGATACATGTGGGCAAAGAGATGGCGGCGCAGCGCGGCGAGATGCAGCACCATTTCCTCGGAAAAAGCCACCACCGGGTGATCCAGCTCACGCAGGGCCTGGGCGCTGTCGGGACGGGCCCGATCAAGCCGTTTGCCGGATTCTGCGAGGACATCCGCCACCATGACGCCGATCAGTTCGCGCACCGCTTCATGGATAATGATGGTTTGCGGCTTGTCCGGCCACCGCTCCCGGACCCGGCGGAATATATCGCCGACCAGCGGCAGCTCGAGCAGAGGCTCGATTTCCAGCAGGCCGGAACTCAACCCGTCATCAATGTCGTGATTATTGTAGGCGATATCATCTGCCAGCGCCGCGATCTGGGCCTCGAGGCCGGCATGGGTTTCGAATTCGAGGTCTCGCCAGCCCTCATAGTCAGTGAAAGCCCAGGGCAGATCGGCTTCCGTCTGCCCCGGCCCGAGCAAGGGGCCATTATGCTTGACGACACCTTCCAGGGTTTCCCAGGTCAGGTTGAGGCCATCGAACTCGGGATAGCGCACTTCCAGCTTGGTGATCGCGCGCAGGGTCTGGGCGTTGTGATCAAAGCCGCCGAAATCCTTCATCTTCAGGGCCAGCTCACGCTCGCCCTCATGCCCGAACGGCGGATGCCCCAGATCATGGGCGAGAGCGAGCGCCTCGGCCAGGTCCTCATCGCCGCGCAAGGCCCGCGCCAGCGTGCGGGCGATCTGTGACACTTCCAGGGAATGGGTCAGACGGGTGCGATAGAGATCGCCCTCATGGGCCACAAATACCTGGGTCTTTCCCTTCAGCCGGCGAAAGGCCGCCGAGTGTATGACTCGGTCACGATCGCGCTGGAATGCATTGCGCATGGCGCTGTCAGCCTGCGGAAAACGGCGCCCGCGTGATTGGGCTGGATGGCAGGCATAGGGGGCACGGGTACGCTCGGTCGCGGCAATGGTCATGTCAGCAGGGCCTTTTATCCGCGCGGGGGGAGGTCCATATAAGACCAAGACGACACAATCCAAAGGCCGTACGGCCGACAGCATCAGGCAGACCCATGTCCGCAAACGTCACACTCTCGGCCTCGGCCGCAAAACAGATCAAGACCATCATCGCCGCCCAGGCGGCGGCCGGCCTGTTGCGCATCGGTGTGGTCGGCGGTGGCTGCTCCGGGTTTTCCTACACCTTTGATCTGGACGACGCGGTCAATGGCGATGACATGATCATCGAACGCGATGGCGCCAAAGTGGTCATCGACGAGGCCTCCCTGCCCTTTCTGGACGGGTCCGAGATCGATTATGTCGACGAGCTGATCGGCGCCAGCTTCAAGATCCACAATCCAAACGCCACCGCCGCCTGCGGTTGCGGCACGAGTTTTTCGGTCTAG

Protein sequences of DBSCAN-SWA_4

>NC_008347|2087771:2096052|2090453_2090678_-|WP_011643846.1|DBSCAN-SWA
MAPGMWQILLVVLLAVLLFGGRGKIASVMGDFAKGITSFRKGLKDDEGESETSESDTPTGALNTETREDEKTGS
>NC_008347|2087771:2096052|2091581_2092397_-|WP_011643848.1|DBSCAN-SWA
MSEDFEEDVRFEAAENAETDALVVDLDGFGGPLHLLLALARKRKIDLAKISILDLADQYLLFMEAARKKRLDLAADYLVMAAWLAFLKSKLLLPKPPKEDDDQPAEVLAAALAFRLRRLEAMRAAADALFARPLLATNIHVRGMPEGVRATRSVVYEADLHDLLSAYSSRRVKQAKSVYRPPTPKVYGLETARDRLETLMPQLSDWRDLDSLLPGAGELGANPPPMRSVRASSMLAALEITKEGHARLRQQEAYAPLYVRSLSGEEGATDD
>NC_008347|2087771:2096052|2094436_2095627_-|WP_041636923.1|DBSCAN-SWA
MTIAATERTRAPYACHPAQSRGRRFPQADSAMRNAFQRDRDRVIHSAAFRRLKGKTQVFVAHEGDLYRTRLTHSLEVSQIARTLARALRGDEDLAEALALAHDLGHPPFGHEGERELALKMKDFGGFDHNAQTLRAITKLEVRYPEFDGLNLTWETLEGVVKHNGPLLGPGQTEADLPWAFTDYEGWRDLEFETHAGLEAQIAALADDIAYNNHDIDDGLSSGLLEIEPLLELPLVGDIFRRVRERWPDKPQTIIIHEAVRELIGVMVADVLAESGKRLDRARPDSAQALRELDHPVVAFSEEMVLHLAALRRHLFAHMYRHYKVNRMMSQARRVTGELFDLYLADPGVLPSDVQAGMTGAGTAQTARAVCDYIAGMTDRFAVEEHRRLFTVQGYF
>NC_008347|2087771:2096052|2090779_2091589_-|WP_011643847.1|DBSCAN-SWA
MTDETTTDEPADAITSAISALRERAAHQGPNVAADAEASEALGVHLAVNTERRNLRILEALLFAAAEPLDEETLIGRLPLEANIQDLLGKLRDEYAERGVHLSEVGGRWRFETAPDLADVLVEVKQEPRKLSQAALETLSIIAYHQPVTRAEIEEIRGVAVSRGTLDLLFELRWVRPRGRRRTPGRPVTYGTTQGFMEYFSLQSIGDLPGMSDLKAAGLLDARLPPDFSVPDPSRSVEPDLLEDPLSDEEAHAFHVDFMDGDDDPDGAT
>NC_008347|2087771:2096052|2092492_2093509_-|WP_011643849.1|DBSCAN-SWA
MTIASVIYGLAGTKLSPDEKAFFRDIDPWGFILFARNIEGINQVSRLTLELRDCVGRDAPILIDQEGGRVARLRPPTWRAAPAAQRFADLWQVDEELAIEATRINHRLLAHELRTIGVDVDCAPVADLRIEGADDIIGDRAFGTTPEPVIHLGRAAMDGLMAGGVAPIIKHIPGHGRARADSHLELPVVPEEHGLLSETDFAPFKGLNDAPMAMTAHIVYSDIDRDLPATQSADMVDKVVRGEIGFDGLLMTDDLSMKALTGTFRERGELSLKAGCDMLLHCNGQMSEMIGVAEGTTALTGRALERAEAAERIRDVIEDFDPDDAESRLNDCLDRLPA
>NC_008347|2087771:2096052|2087771_2089049_-|WP_011643843.1|tRNA|DBSCAN-SWA
MHDIKLIRDNPDAFDAGLAMRGLPAQSATLIELDASRREALGKQQDAETERNALSKQIGKAKASGDEAEFNRLRSEVDRLKAVLEESGQQARHFDEVLNQHLAALPNLPHADVPQGADEADNVEERRWGEPRTMAFTPRDHVDLGESLGQMDFKKAAEISGSRFVALRGGLARLERALAQFMLDLHTTEHGYEEVSPPYMVRDEAVFGTGQLPKFAEDLFRTTDDHWLIPTAEVPLTNLARETIHAEADLPMRMTAYTPCFRSEAGSAGRDTRGMIRLHQFQKVEMVSIVTPDESDAELERMTGCAEKVLQLLELPYRVMKLCTGDMGFAARRTYDLEVWMPSQDCYREISSCSTCGDFQARRMDARFRKEGEKRPAFLHTLNGSGVAVGRALVAVLENHQNEDGSITIPAALRPYMGGVERIEG
>NC_008347|2087771:2096052|2095722_2096052_+|WP_011643852.1|DBSCAN-SWA
MSANVTLSASAAKQIKTIIAAQAAAGLLRIGVVGGGCSGFSYTFDLDDAVNGDDMIIERDGAKVVIDEASLPFLDGSEIDYVDELIGASFKIHNPNATAACGCGTSFSV
>NC_008347|2087771:2096052|2089119_2089935_-|WP_011643844.1|DBSCAN-SWA
MAEIEHDEVEASRAPLIEHLIELRSRLVVIMGFLLVGFIGCFIFSETLYQWLLLPYRDAASIVRGVPVEELDLTANFFAPLEFFFVRLKLSLVGSVIIIFPVIAWQIYGFVAPGLYKNERGAFAPFLAMSPVLFGVGVSFVYFLVLPMVMRFSLGQEQSAELVGTRIELLLNVSDYMNLITTLMLVFGISFQMPVFLMLLAKAGILKAKTLLKGWRFAVVGIALFAAFATPPDPISQIMLGGALLLLYFISIGGMHLMQSSDDRADDTQED
>NC_008347|2087771:2096052|2093505_2094339_-|WP_011643850.1|DBSCAN-SWA
MTDQDEESRIGAYAPPADEFATFDARDEDARRGLLLLTTALAAFVLFLGVVWSAYNQGLRDSGRDGAPRLVPNEEPYRERPVDPGGAETPDTELEVYDRLTGDGAADDTVSLRPAPEEPLEDSGRPTLRVEQVDADAAANTQPQDTPIETDTLPDATPRQAPQRPVREPDPAPEPVVAAPEPAAPSGQVTGVDLTGSWVVQIASFRTEADAEAAWVAFRTRFSDISSGMAPDVASVEIEGRGTYHRLRIAAFGDRGDAVSFCSTLQSRGQDCLVARR
>NC_008347|2087771:2096052|2089940_2090450_-|WP_011643845.1|DBSCAN-SWA
MSPGIGMPELLVVLVLALVVVGPQQLPVMMRKVGQMMAQARAMAKDFQNSFEEIGRETELSELRREIDALKQANPINQIHGELDKAARGTQDDDIRALKLKHVEQNQAETDADKAAKAAKLAALDSEGPQSTTPEADARADAAASADETERAAPVETTPAKPVDEIKGR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011643843.1|2087771_2089049_-|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.2e-102	47.0
WP_011643844.1|2089119_2089935_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	2.2e-35	37.2
WP_011643845.1|2089940_2090450_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_011643846.1|2090453_2090678_-	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	7.5e-07	56.4
WP_011643847.1|2090779_2091589_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.6e-41	48.8
WP_011643848.1|2091581_2092397_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.1e-34	35.8
WP_011643849.1|2092492_2093509_-	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	3.8e-21	42.1
WP_011643850.1|2093505_2094339_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_041636923.1|2094436_2095627_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA
WP_011643852.1|2095722_2096052_+	iron-sulfur cluster insertion protein ErpA	A0A1B1IT29	uncultured_Mediterranean_phage	1.0e-12	39.0