CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NC_008609	Pelobacter propionicus DSM 2379, complete genome	2 crisprs	WYL,cas3,DinG,csa3,RT,PrimPol,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,Cas9_archaeal	3	23	3
NC_008607	Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence	1 crisprs	csa3,DEDDh,c2c4_V-U1	0	3	1
NC_008608	Pelobacter propionicus DSM 2379 plasmid pPRO2, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_008609_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008609_1

850191-850280

Orphan

Consensus_repeat	Method
CGGGCACGCTCCTTTCGCGGGGGCTGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008609_1

>merge|NC_008609|1|850191-850280|CRISPRCasFinder
CGGGCACGCTCCTTTCGCGGGGGCTGCGGAGCGTGCGCACCATGGCCGCCGACCGCGACATCGGGCACGCTCCTTTCGCGGGGGCTGCGG

>NC_008609|1|1|850191-850280|CRISPRCasFinder
CGGGCACGCTCCTTTCGCGGGGGCTGCGG	AGCGTGCGCACCATGGCCGCCGACCGCGACAT
CGGGCACGCTCCTTTCGCGGGGGCTGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_008609.1\|WP_011734752.1\|855368_855875_+\|hypothetical-protein	unknown	unknown	unknown
NC_008609.1\|WP_011734744.1\|847723_848341_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224565
NC_008609.1\|WP_011734742.1\|846409_847177_-\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|377700
NC_008609.1\|WP_083761178.1\|849081_850044_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NC_008609.1\|WP_011734750.1\|854290_854596_+\|hypothetical-protein	unknown	unknown	unknown
NC_008609.1\|WP_011734743.1\|847213_847528_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NC_008609.1\|WP_011734741.1\|845576_846164_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181382
NC_008609.1\|WP_011734754.1\|857032_858730_+\|hypothetical-protein	unknown	unknown	unknown
NC_008609.1\|WP_011734740.1\|844820_845327_+\|flavodoxin	unknown	unknown	gnl\|CDD\|236439
NC_008609.1\|WP_011734749.1\|853014_854001_+\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NC_008609.1\|WP_041532118.1\|844336_844462_+\|hemin-uptake-protein-HemP	unknown	unknown	gnl\|CDD\|378463
NC_008609.1\|WP_157040072.1\|843000_843783_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NC_008609.1\|WP_011734755.1\|858726_859386_+\|hypothetical-protein	unknown	unknown	unknown
NC_008609.1\|WP_041532117.1\|844008_844233_+\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	unknown
NC_008609.1\|WP_083761179.1\|851460_852591_+\|imelysin-family-protein	unknown	unknown	gnl\|CDD\|271142
NC_008609.1\|WP_011734737.1\|842248_842998_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NC_008609.1\|WP_011734748.1\|852653_852848_+\|hypothetical-protein	unknown	unknown	unknown
NC_008609.1\|WP_011734751.1\|854579_855359_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|227303
NC_008609.1\|WP_011734746.1\|850313_851492_+\|endoribonuclease-L-PSP	unknown	unknown	gnl\|CDD\|100010
NC_008609.1\|WP_011734753.1\|855891_856965_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|226912

Protein	Function_ID	Function_description	E-value
NC_008609.1\|WP_011734744.1\|847723_848341_-\|hypothetical-protein	gnl\|CDD\|224565	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones].	0.00130735
NC_008609.1\|WP_011734742.1\|846409_847177_-\|prepilin-peptidase	gnl\|CDD\|377700	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain. This family is found at the N-terminus of the pre-pilin peptidases (pfam01478). It's function has not been specifically determined; however some of the family have been characterized as bifunctional, and this domain may contain the N-methylation activity (EC:2.1.1.-). It consists of an intracellular region between a pair of transmembrane. This region contains an invariant proline and two almost fully conserved disulphide bridges - hence the name DiS-P-DiS. The cysteines have been shown to be essential to the overall function of the enzyme in, but their role was incorrectly ascribed.	1.8536e-42
NC_008609.1\|WP_083761178.1\|849081_850044_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.28329e-23
NC_008609.1\|WP_011734753.1\|855891_856965_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|226912	COG4537, ComGC, Competence protein ComGC [Intracellular trafficking and secretion].	7.09224e-05
NC_008609.1\|WP_011734743.1\|847213_847528_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	2.19328e-33
NC_008609.1\|WP_011734741.1\|845576_846164_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|181382	PRK08317, PRK08317, hypothetical protein; Provisional.	3.66092e-17
NC_008609.1\|WP_011734740.1\|844820_845327_+\|flavodoxin	gnl\|CDD\|236439	PRK09267, PRK09267, flavodoxin FldA; Validated.	5.12768e-82
NC_008609.1\|WP_083761179.1\|851460_852591_+\|imelysin-family-protein	gnl\|CDD\|271142	cd14659, Imelysin-like_IPPA, Imelysin-like protein. This family includes insulin-cleaving membrane protease (imelysin, ICMP)-like protein (IPPA from Psychrobacter arcticus), the Pseudomonas aeruginosa PA4372 and Vibrio cholera VC1266 Fur-regulated imelysin-like protein. They share the overall fold and a similar functional site as the insulin-cleaving membrane protease (ICMP). However, IPPA adopts a structure distinctive from the known HxxE metallopeptidases or iron-binding proteins, suggesting this protein may not be a peptidase; the histidine in the GxHxxE motif region is no longer conserved (GxxxxE), indicating a possible loss of enzymatic function or a change in substrate preference (compared to imelysin and IrpA families). A putative functional site for this non-peptidase homolog is located at the domain interface. The tertiary structure shows a fold consisting of two domains, each of which consists of a bundle of four helices that are similar to each other, implying an ancient gene duplication and fusion event.	3.93384e-51
NC_008609.1\|WP_157040072.1\|843000_843783_+\|HD-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	4.38353e-57
NC_008609.1\|WP_011734749.1\|853014_854001_+\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	1.73605e-07
NC_008609.1\|WP_041532118.1\|844336_844462_+\|hemin-uptake-protein-HemP	gnl\|CDD\|378463	pfam10636, hemP, Hemin uptake protein hemP. This is a bacterial family of proteins that are involved in the uptake of the iron source hemin.	1.17007e-11
NC_008609.1\|WP_011734737.1\|842248_842998_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.35848e-59
NC_008609.1\|WP_011734751.1\|854579_855359_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|227303	COG4968, PilE, Tfp pilus assembly protein PilE [Cell motility and secretion / Intracellular trafficking and secretion].	7.39106e-09
NC_008609.1\|WP_011734746.1\|850313_851492_+\|endoribonuclease-L-PSP	gnl\|CDD\|100010	cd06153, YjgF_YER057c_UK114_like_5, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	6.5512e-43

>NC_008609.1|WP_083761178.1|849081_850044_+|helix-turn-helix-transcriptional-regulator
MTALEGGTLMKNGNTVPLSWFSPARNCWALQTLQVELVQSARSRGDIRCEVVTEDHWQVIFMLEGELQECVVNDNGCHLQQLAGEERCSLRYLTRGMRLNEGSQDSGGGRLLIRLASPELFGTGRLRREADELQRQGAAALTIPATPQMLRTAADILAHSVRPDNLLPVMSGALDLLRQIAHSRELSRVPSADREKSAVDAACKLLEASMDNPPSLEELATQVGMSATRFKQAFSRIRGVPPFAYLRNLRLERAMCLLRYEGLRVTEVALEVGYNNFSHFAKIFEARFGIVPSRVRRETMVRLVALLYGLHALALCAEMV
>NC_008609.1|WP_011734744.1|847723_848341_-|hypothetical-protein
MNSKLRHLVLVGALFAIGLGTALLGAGKEADAAGPDLFLGKKTSATTVYFVNDWFCPVCIRTEPVIEKIYPTIAGSARIGFVDFPIHGETTNFTPYNTYFLTHEKGKYIAIRKALSALTRKTKKPSHGEVKAAVAPLGVKLPQLKTSDTLFGLQSNLMVYRGYDVTMTPTAVVTNSRTKKTRLLAGKNRISELSIKTAIAQVENR
>NC_008609.1|WP_011734743.1|847213_847528_-|YbaB/EbfC-family-nucleoid-associated-protein
MAKGMTNILKQAQMIQAKMSKLQENAAMKTAEATSGGGAVTVAVNGKNEILSLSIQKQVVDPEDVEMLQDLIRAAVNQALKKVQDELSGEMSRITGGRSIPGVF
>NC_008609.1|WP_011734742.1|846409_847177_-|prepilin-peptidase
MTSQFYYSIIVFIFGAVTGSFLNVCICRMPKDESVVSPPSHCPTCMYRIRWYDNIPLASYLLLRGRCRGCGIRIPIRYPLVELGNGLLALALFLRYSLSPTFAALFLFCSALLVITCIDLEYRVIPNKISLPGIVIGFVLSFFLPWPGWLNSLLGILAGGGSLLLVACAYEWLTGREGMGGGDIKLVAMMGAFLGWEAVPFIILAGSLAGLLAGGLPMLIRRRDSGQAIPFGPYLAFGALFHLFLGLRILNRYLA
>NC_008609.1|WP_011734741.1|845576_846164_-|methyltransferase-domain-containing-protein
MNTMSSEQPETNKHGVCPWWMAYAFDNPLRRLMHPPARILGPYVQEGMTALDLGCGFGHYSLGMARLTGKTGKVVAVDVQQKMLDKTMGRARGDGLADIIQPLLCDGHGIGLPLRLDFALASNSLHETPDPRRLLSELFGMLSPGGLFLLMEPGVHLRQEEFEAEVAMAGAAGFIEVDRPRVIRQRCSLLKKTAP
>NC_008609.1|WP_011734740.1|844820_845327_+|flavodoxin
MEKVAVIYGSTTGNTENVAQSIRELLGEDRADLINVASAGVEDFNRYRNLILGASTWGLGELQDDWDGKLALLKSADLKGKQIALFGLGDQQSYSETFLDGMGTLYETLLSCGVMPIGQWPSEGYSFGASTACVDGNFVGLALDEDTEPDKTEGRIRTWLKQLDTQWL
>NC_008609.1|WP_041532118.1|844336_844462_+|hemin-uptake-protein-HemP
MKKRIVTSRELLGEDREIVIIHDGKEYLLRITVNNRLILTK
>NC_008609.1|WP_041532117.1|844008_844233_+|ribbon-helix-helix-protein,-CopG-family
MEQAQHARETSGRKSRRKGARKREQLHHMISLRINDPQKASLERLSLATSRSISDIMREAVTLWSKKHRRLCLE
>NC_008609.1|WP_157040072.1|843000_843783_+|HD-domain-containing-protein
MVRATTSLFVMKRNQKKRMRNRGESLDSFTSLHHLAEALGNAVDARDSQLYRHSRDVAEVSCVLAHAMGFSREEIDVIHIAGHLHDIGKIGIPDVVLKKKGPLDADEWRWMRLHPGIGAEIVRPVPALNGPGGVADIILRHHERFDGKGYPDGLGDDQIPRGARIVAVADTLSALLRNRSYRAGCSFDLACAEIRRCSGSQFDPVVVKVLEKNRKKVAGCLDAAEELAVSACSPYEPPSHGLFVPGEMLLQESASLPHVL
>NC_008609.1|WP_011734737.1|842248_842998_+|diguanylate-cyclase
MSEIYVDEMFVGEAAEIMSISDVFPEYRQLRTMGFREGRLVDLLHFDPLITRKLVLRVEGMRLAMGASCAAHIRVRPLKSAYLHLRDMAHYDNLTGCFNRHAAGTVVRQEVERFSSLGLPLALLMADLDHFKRINDTFGHTSGDDVLKSFASLIRQGLRRSDLFCRWGGEEFLILLRGTLKEEALKIAERFRERIASALFPPFNERGAVTVSIGCACLPPGRPLERLIVDADCALYRAKQGGRNRVCLC
>NC_008609.1|WP_011734746.1|850313_851492_+|endoribonuclease-L-PSP
MHYHSVTQDTVRITASSFCRNRVSELHLMAVSDNQKAFSGQMEDILGAVTEYLSAHGIPNSSVVFTRFFLSDYANQAEELSFIVDYVTSVFGDCAVSIVQQPPAASGKIAVWAYVIDDGNRGCLSKFRATPACDLVVTRGGYEHIWSTQLVSGNCSTKSFDQAGAVFTKLSHSLEGKGYSLKENCVRTWLFVKDIDSNYSGVVDARRRFFETVNMTWDTHYIASTGIEGRHADPGVCVLLDAYSIGGVQHGQIGFLKAPDFLNPTHEYGVTFERGTSVAFGDRKHIFISGTASINHKGEIMHRNDVVRQLNRTFVNIMALLADAGAGMENVAQMIVYLRDPSDSETVNAYLDENYRNIPNIVTLAPVCRPGWLVEVECIAISDAANPSFANF
>NC_008609.1|WP_083761179.1|851460_852591_+|imelysin-family-protein
MRRIRPSPTSDKSVAIVEPTNMTRFSPTSSAILLPCLLALAAALPPAAVAAAPTEPGVLASLATGVIRPSLTELADTARKLADSSRRMCQRRDMAGLTAAQDDWRKASAAWRRSVPFQFGPAANLERRLGGPTQETVLEAAVRDDRMQHLRTGKETRGYAAVEYLLFAPAGAAAATAGGRCEHLRDVTAEIAAVTSRAEQEWDKGYGREFVAAGDGKPFLVPGDALSLILARTLNSIETVLRDGIGVPGGIFTGRPRPELFYGRRSATTREAFQATLEGLNRSLLGGGSASIVNLVATRDGLVSRKNPALAAGIRRQLEIIGNTIAKLDAADLGSHGGKPSRRLKRLYDGMEKLQKQLVEATLVLELDVRSATEKQ
>NC_008609.1|WP_011734748.1|852653_852848_+|hypothetical-protein
METATNQDVMEQLAKLYEEVFRHDGYGEIRLEMKILRRGQKEVIIHCGKQYRFVVDFVKQPGMG
>NC_008609.1|WP_011734749.1|853014_854001_+|type-II-secretion-system-protein
MSINFFNRKEIKCLQKLRKKLNQRGFTLLELLVVVAILAAIAGTATIALKDTDARASAAAHVTMMDELNKGISTYRVLQRNTLPNRLDSLMMYGGTGHVTVGAAAPLSILGFTAADTGTYTNEDAATLPIPAGVQTIMSDAGITELRYVNDVAANNPDGDGNCGDIKALVENRGNNVVAGNIFLSASANGCGVAQALDGTATPMGMFWVGGQERLTGQPFTVETGTPVEFDGTNLATANSPAYLLTGIGPSSTLFDANTLGGMTTVPVYRHVKPNEYNRFVAVWNVGDFDGAGAITAKDQIELVAIVDGALDTKEEELGEWDGTRNTI
>NC_008609.1|WP_011734750.1|854290_854596_+|hypothetical-protein
MKTNTMMKCALLLTTLLTMSACGRPDVGLMKEGLTRTGMPADQAACFAEKMSEKVKGRPYNYMAKLMKAGSDERDAVNKARRKFGPDFKEPMEQARNACVK
>NC_008609.1|WP_011734751.1|854579_855359_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MPASSRTDRASGSPLSGRRGFTLLELLVIVAIMAAVAFVAGGSYSGVSRQANDQLVRSEMQELATAIRRFRQDTGYYPKTGPFGLVGVGAGKITDAAIEAQFSHAGASAAERARWFYSPANLYQLTAEKSLLPAGHQLEEWNKETGRGWRGPYLRGDDGYVDIRDGINSGTAAGTSAGNPLAGNDIRDVNGVADPFELRAVTVSGVSLLSWSAAAGVTEREVWGRPYLVFDLNTAHPWIVSMGPDGVYNTSDDIKLTIE
>NC_008609.1|WP_011734752.1|855368_855875_+|hypothetical-protein
MSFAKKLLFILALSALISCPVSMRAHAAAKPAASRTAGSAKAAFRAIDLDRFIVQEKKAVGKDKKRIIRMAAPVSFEARMKRNPEEKKMTYVYEVLELSGVKPLPEVKHRMFVESRGRRIIPVYVERRVVDRIGKELTAGSMARFVGYHLYSYGKGPAIMVVDFAAAR
>NC_008609.1|WP_011734753.1|855891_856965_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MDTAPSYIGIGNERGLTLLELLLVVTILSAVAWVSLASVANDAEQIRYDDTRNRLRSIRGAVVGDTGTAGWEKGIQSGFVVDNGRLPGSINDLIMAPSGFLAYGPVSPLFDPAPDTNGYNNGGETTLSQAQNQFMKGFRGSYLVGSAGGTYRDGWGTRLSPGATLKNCPTVPSGSTNSGSDLDSDNHGWCVTLYNDGLYVDSYGKDGENGGNDFEADMAMGEPVLAGDWRINLSGAGVRIVNQSGADLSFSTAVRASLLIFHNGASATWRRITSGVAADTCLDGDGDGLCGGAPAPRETTATLPAENVPAGEHLLVLVADPDGTAHNADDSLYAGPVTARVKFFSRGGVPDLVLIIR
>NC_008609.1|WP_011734754.1|857032_858730_+|hypothetical-protein
MRLKPRSIIQGMKVGRPGRMLVFESTGFALYGAVASRGLRSPFELGEAAVSTAPDFATAVGEVLARLRERGQRLPKKALLVTPSAAAKLLGLPVDPAKPRGFSQMSELVRWELEEFCVSQNDIWTQGSLLMGRGHISSGQRREAEGSGQGPRPSSSGLYNDMVSREQLDECLELMELLSASDDELSTGWAPHASDGEEGPFTWWGAGIGTKLCARWSDAFRRQGVFLAWIYPQLGAAASLLARETESWLLVEVRQEQFALFLGHNGLLTSLALSFTSCGLADPVTVAEAARGAIHPETARIYLSAPVSLAAPILYELSRLTGREAALLSTGGTPPDDETCPPEVLASLTGAALHALGQCPSSTLVRVPAQPPLPPLWQNRELYPWLVMGLLLAVMAGNEWRLRSRAMKNEWELEKADIEYNLKMKVKKQLQSSGSEAKHLEQELKLKEETLKEETRLKNIFDNVIRHRQELVPGLLQSVAAAVNDEVVLDRVEELDNGKGFYLEAWALRDTAGQYFVSRLNKTLVPWEYKVGEMQFARGRGRVNIDGVILKIWLIGTDVATEAPK
>NC_008609.1|WP_011734755.1|858726_859386_+|hypothetical-protein
MMGKALARWKKLSAKERLRYQLLLIAALLGIYGGGFYPISKSRLAESEKMLHRRQDRIKKRAGAVDTVVGAASSPQAIAKRIETVDAELDSLRMEFDELDSGFAPVDSTETRQQLLLEISALAERSGVELTSVARKGFSPEKDLGTPAVDPAVGRPLLLITANTTYPYLLTFLYGLRDLSFYVSVMKVKMHSRHLDEEQRKSSTPLPSGLISVSIEMSI

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Crispr_ID: NC_008609_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008609_2

2524542-2527193

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGCGCATGCGGGGAACAC	PILER-CR
CGGTTCATCCCCGCGCATGCGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGCGCATGCGGGGAACAC	CRT

43 spacers

cas1,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh

The CRISPR arrays of NC_008609_2

>merge|NC_008609|2|2524542-2527193|PILER-CR,CRISPRCasFinder,CRT
CGGTTCATCCCCGCGCATGCGGGGAACACAACAACGTCAATTCCTAGCCCGGCTGCAACATCGGTTCATCCCCGCGCATGCGGGGAACACCCCCGGCTCAACCTGGGGAACCCTGGAAGCGACGGTTCATCCCCGCGCATGCGGGGAACACAAACCTTTAACCAAAAGAAAGAAAGAAACCGCCGGTTCATCCCCGCGCATGCGGGGAACACCCTGGTCGCCTCGGTGCCAATTCCGGAAACGTCGGTTCATCCCCGCGCATGCGGGGAACACCTGCTGCGTATGCTGTCGCCATGTTTGCCATCCGGTTCATCCCCGCGCATGCGGGGAACACTATAATCCTAGCAATTTCTCCTTTAAATTTACCGGTTCATCCCCGCGCATGCGGGGAACACGGAGGACGGTGCCTCGGCTAAGCCGTTGACCCCGGTTCATCCCCGCGCATGCGGGGAACACCTGACAGAAGAGTTCTCAACGAGAGAGGACAGCGGTTCATCCCCGCGCATGCGGGGAACACTCGCGAATCATCGCCATTGTAGGAGAATACTGCGGTTCATCCCCGCGCATGCGGGGAACACGTATGTGGCTATGGGATCGCCCGTAACATCCTCGGTTCATCCCCGCGCATGCGGGGAACACGCAAACGCCCATTTGATAGCCGCCGCACCTGACGGTTCATCCCCGCGCATGCGGGGAACACGTTTGAAATCGCGCAAATCATGCCTGAAAGACCGGTTCATCCCCGCGCATGCGGGGAACACTTCCAGCAACCGCTTGATCACGAAAACCTCACCGGTTCATCCCCGCGCATGCGGGGAACACCTCTCCAGCATCCCCCGGACACACGCGGCGGACGGTTCATCCCCGCGCATGCGGGGAACACCCACGGACACACCAGGAACTAAAAAATATTCGTACTTCATCCCCGCGCATGCGGGGAACACCCCCTGTATGGGGCGGGCGTAGTTTTCCAGCACGGTTCATCCCCGCGCATGCGGGGAACACGGTGAGCGGTTGACCGATTTTCGGAGCACCCGCGGTTCATCCCCGCGCATGCGGGGAACACCCTTGCGGTCAATGGTTTCTACGTTGTTTGGTCGGTTCATCCCCGCGCATGCGGGGAACACTTCGCTATACCCGTGCCGAGCGCAACATCCACCGGTTCATCCCCGCGCATGCGGGGAACACTCGGTCCAGAGATCGGTGCCGGTGAGGGTGATCGGTTCATCCCCGCGCATGCGGGGAACACAGAAACGCGATCAGTCAACCCAACTAAAACACCGGTTCATCCCCGCGCATGCGGGGAACACTCTGGTTCTTGCTTCATTCCATGATCAGGCGTCGGTTCATCCCCGCGCATGCGGGGAACACGTGTCCATCAGGTCGGCCAGGTCCTGACCCAGCGGTTCATCCCCGCGCATGCGGGGAACACATGTCGTCCTTGGTGGTGTCGCCGTGGAAGACCGGTTCATCCCCGCGCATGCGGGGAACACGTTACGTTGCGACAACGCCGACTATCAACAATCGGTTCATCCCCGCGCATGCGGGGAACACTTCATGTTATATCGATTCGTTATATGGATTGGCGGTTCATCCCCGCGCATGCGGGGAACACTCTCAAGGCCAATGGCGCTGCCATCTCGCGTTCGGTTCATCCCCGCGCATGCGGGGAACACATTTACTGACTGGTGCCGCTCTGTGGGCGGGACGGTTCATCCCCGCGCATGCGGGGAACACTGTGTAGCAGACAGTAGGATATCAGGGATGGACGGTTCATCCCCGCGCATGCGGGGAACACTTACATGAATACATCATTATTACCTACAGGCGCGGTTCATCCCCGCGCATGCGGGGAACACTTTGAACTGGTAGCCGCCATCGTCGCCGCCAACGGTTCATCCCCGCGCATGCGGGGAACACAATGGTCCGATTTCGCCAACTCTGGATCGGTCCGGTTCATCCCCGCGCATGCGGGGAACACGCTCAACTTTTCGGGGACATGCAGGTGGGCAACGGTTCATCCCCGCGCATGCGGGGAACACTAAAAACTGCCGTTGGGTTTTCCTTCCGAGTTCGGTTCATCCCCGCGCATGCGGGGAACACTGGTTACGTGTTACAAAGCCGATGTGTTTTTACGGTTCATCCCCGCGCATGCGGGGAACACAGTACCGTATAAATAGCCCAAATAATAACACCCGGTTCATCCCCGCGCATGCGGGGAACACCCTTGAGCAGGTGTTCGGCCTCCATGATGTCCGGGTTCATCCCCGCGCATGCGGGGAACACGACCATCGCCGCGCGCCTGGGGGTAAAGCCGGGGGTTCATCCCCGCGCATGCGGGGAACACAGAGTAAGCCCGTATTTCAGACGTAGTGCTTTCGGTTCATCCCCGCGCATGCGGGGAACACGAACTTCCTGATGGTGGTCGGTTTCGTCTCCGAGGTTCATCCCCGCGCATGCGGGGAACACTCGATCTGTGGCGCTGTCTCCTGACCAATGGGCGGTTCATCCCCGCGCATGCGGGGAACACCCAGAGTAGGCCCACGAGGTGCGTTTTTGCTACGGTTCATCCCCGCGCATGCGGGGAACACAGATACCCACCATTATAGGGAGTAGTCCATTGCGGTTCATCCCCGCGCATGCGGGGAACAC

>NC_008609|2|1|2524542-2527193|PILER-CR
CGGTTCATCCCCGCGCATGCGGGGAACAC	AACAACGTCAATTCCTAGCCCGGCTGCAACAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCCCGGCTCAACCTGGGGAACCCTGGAAGCGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AAACCTTTAACCAAAAGAAAGAAAGAAACCGC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTGGTCGCCTCGGTGCCAATTCCGGAAACGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTGCTGCGTATGCTGTCGCCATGTTTGCCATC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TATAATCCTAGCAATTTCTCCTTTAAATTTAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GGAGGACGGTGCCTCGGCTAAGCCGTTGACCC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTGACAGAAGAGTTCTCAACGAGAGAGGACAG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCGCGAATCATCGCCATTGTAGGAGAATACTG
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTATGTGGCTATGGGATCGCCCGTAACATCCT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GCAAACGCCCATTTGATAGCCGCCGCACCTGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTTTGAAATCGCGCAAATCATGCCTGAAAGAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCCAGCAACCGCTTGATCACGAAAACCTCAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTCTCCAGCATCCCCCGGACACACGCGGCGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCACGGACACACCAGGAACTAAAAAATATTCG
TACTTCATCCCCGCGCATGCGGGGAACAC	CCCCTGTATGGGGCGGGCGTAGTTTTCCAGCA
CGGTTCATCCCCGCGCATGCGGGGAACAC	GGTGAGCGGTTGACCGATTTTCGGAGCACCCG
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTTGCGGTCAATGGTTTCTACGTTGTTTGGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCGCTATACCCGTGCCGAGCGCAACATCCAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCGGTCCAGAGATCGGTGCCGGTGAGGGTGAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGAAACGCGATCAGTCAACCCAACTAAAACAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCTGGTTCTTGCTTCATTCCATGATCAGGCGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTGTCCATCAGGTCGGCCAGGTCCTGACCCAG
CGGTTCATCCCCGCGCATGCGGGGAACAC	ATGTCGTCCTTGGTGGTGTCGCCGTGGAAGAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTTACGTTGCGACAACGCCGACTATCAACAAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCATGTTATATCGATTCGTTATATGGATTGG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCTCAAGGCCAATGGCGCTGCCATCTCGCGTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	ATTTACTGACTGGTGCCGCTCTGTGGGCGGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TGTGTAGCAGACAGTAGGATATCAGGGATGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTACATGAATACATCATTATTACCTACAGGCG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTTGAACTGGTAGCCGCCATCGTCGCCGCCAA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AATGGTCCGATTTCGCCAACTCTGGATCGGTC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GCTCAACTTTTCGGGGACATGCAGGTGGGCAA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TAAAAACTGCCGTTGGGTTTTCCTTCCGAGTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TGGTTACGTGTTACAAAGCCGATGTGTTTTTA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGTACCGTATAAATAGCCCAAATAATAACACC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTTGAGCAGGTGTTCGGCCTCCATGATGTCC
GGGTTCATCCCCGCGCATGCGGGGAACAC	GACCATCGCCGCGCGCCTGGGGGTAAAGCCGG
GGGTTCATCCCCGCGCATGCGGGGAACAC	AGAGTAAGCCCGTATTTCAGACGTAGTGCTTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GAACTTCCTGATGGTGGTCGGTTTCGTCTCCG
AGGTTCATCCCCGCGCATGCGGGGAACAC	TCGATCTGTGGCGCTGTCTCCTGACCAATGGG
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCAGAGTAGGCCCACGAGGTGCGTTTTTGCTA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGATACCCACCATTATAGGGAGTAGTCCATTG
CGGTTCATCCCCGCGCATGCGGGGAACAC

>NC_008609|2|2|2524542-2527193|CRISPRCasFinder
CGGTTCATCCCCGCGCATGCGGGGAACAC	AACAACGTCAATTCCTAGCCCGGCTGCAACAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCCCGGCTCAACCTGGGGAACCCTGGAAGCGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AAACCTTTAACCAAAAGAAAGAAAGAAACCGC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTGGTCGCCTCGGTGCCAATTCCGGAAACGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTGCTGCGTATGCTGTCGCCATGTTTGCCATC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TATAATCCTAGCAATTTCTCCTTTAAATTTAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GGAGGACGGTGCCTCGGCTAAGCCGTTGACCC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTGACAGAAGAGTTCTCAACGAGAGAGGACAG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCGCGAATCATCGCCATTGTAGGAGAATACTG
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTATGTGGCTATGGGATCGCCCGTAACATCCT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GCAAACGCCCATTTGATAGCCGCCGCACCTGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTTTGAAATCGCGCAAATCATGCCTGAAAGAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCCAGCAACCGCTTGATCACGAAAACCTCAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTCTCCAGCATCCCCCGGACACACGCGGCGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCACGGACACACCAGGAACTAAAAAATATTCG
TACTTCATCCCCGCGCATGCGGGGAACAC	CCCCTGTATGGGGCGGGCGTAGTTTTCCAGCA
CGGTTCATCCCCGCGCATGCGGGGAACAC	GGTGAGCGGTTGACCGATTTTCGGAGCACCCG
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTTGCGGTCAATGGTTTCTACGTTGTTTGGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCGCTATACCCGTGCCGAGCGCAACATCCAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCGGTCCAGAGATCGGTGCCGGTGAGGGTGAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGAAACGCGATCAGTCAACCCAACTAAAACAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCTGGTTCTTGCTTCATTCCATGATCAGGCGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTGTCCATCAGGTCGGCCAGGTCCTGACCCAG
CGGTTCATCCCCGCGCATGCGGGGAACAC	ATGTCGTCCTTGGTGGTGTCGCCGTGGAAGAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTTACGTTGCGACAACGCCGACTATCAACAAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCATGTTATATCGATTCGTTATATGGATTGG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCTCAAGGCCAATGGCGCTGCCATCTCGCGTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	ATTTACTGACTGGTGCCGCTCTGTGGGCGGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TGTGTAGCAGACAGTAGGATATCAGGGATGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTACATGAATACATCATTATTACCTACAGGCG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTTGAACTGGTAGCCGCCATCGTCGCCGCCAA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AATGGTCCGATTTCGCCAACTCTGGATCGGTC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GCTCAACTTTTCGGGGACATGCAGGTGGGCAA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TAAAAACTGCCGTTGGGTTTTCCTTCCGAGTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TGGTTACGTGTTACAAAGCCGATGTGTTTTTA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGTACCGTATAAATAGCCCAAATAATAACACC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTTGAGCAGGTGTTCGGCCTCCATGATGTCC
GGGTTCATCCCCGCGCATGCGGGGAACAC	GACCATCGCCGCGCGCCTGGGGGTAAAGCCGG
GGGTTCATCCCCGCGCATGCGGGGAACAC	AGAGTAAGCCCGTATTTCAGACGTAGTGCTTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GAACTTCCTGATGGTGGTCGGTTTCGTCTCCG
AGGTTCATCCCCGCGCATGCGGGGAACAC	TCGATCTGTGGCGCTGTCTCCTGACCAATGGG
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCAGAGTAGGCCCACGAGGTGCGTTTTTGCTA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGATACCCACCATTATAGGGAGTAGTCCATTG
CGGTTCATCCCCGCGCATGCGGGGAACAC

>NC_008609|2|1|2524542-2527193|CRT
CGGTTCATCCCCGCGCATGCGGGGAACAC	AACAACGTCAATTCCTAGCCCGGCTGCAACAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCCCGGCTCAACCTGGGGAACCCTGGAAGCGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AAACCTTTAACCAAAAGAAAGAAAGAAACCGC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTGGTCGCCTCGGTGCCAATTCCGGAAACGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTGCTGCGTATGCTGTCGCCATGTTTGCCATC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TATAATCCTAGCAATTTCTCCTTTAAATTTAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GGAGGACGGTGCCTCGGCTAAGCCGTTGACCC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTGACAGAAGAGTTCTCAACGAGAGAGGACAG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCGCGAATCATCGCCATTGTAGGAGAATACTG
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTATGTGGCTATGGGATCGCCCGTAACATCCT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GCAAACGCCCATTTGATAGCCGCCGCACCTGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTTTGAAATCGCGCAAATCATGCCTGAAAGAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCCAGCAACCGCTTGATCACGAAAACCTCAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CTCTCCAGCATCCCCCGGACACACGCGGCGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCACGGACACACCAGGAACTAAAAAATATTCG
TACTTCATCCCCGCGCATGCGGGGAACAC	CCCCTGTATGGGGCGGGCGTAGTTTTCCAGCA
CGGTTCATCCCCGCGCATGCGGGGAACAC	GGTGAGCGGTTGACCGATTTTCGGAGCACCCG
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTTGCGGTCAATGGTTTCTACGTTGTTTGGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCGCTATACCCGTGCCGAGCGCAACATCCAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCGGTCCAGAGATCGGTGCCGGTGAGGGTGAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGAAACGCGATCAGTCAACCCAACTAAAACAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCTGGTTCTTGCTTCATTCCATGATCAGGCGT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTGTCCATCAGGTCGGCCAGGTCCTGACCCAG
CGGTTCATCCCCGCGCATGCGGGGAACAC	ATGTCGTCCTTGGTGGTGTCGCCGTGGAAGAC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GTTACGTTGCGACAACGCCGACTATCAACAAT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTCATGTTATATCGATTCGTTATATGGATTGG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TCTCAAGGCCAATGGCGCTGCCATCTCGCGTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	ATTTACTGACTGGTGCCGCTCTGTGGGCGGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TGTGTAGCAGACAGTAGGATATCAGGGATGGA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTACATGAATACATCATTATTACCTACAGGCG
CGGTTCATCCCCGCGCATGCGGGGAACAC	TTTGAACTGGTAGCCGCCATCGTCGCCGCCAA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AATGGTCCGATTTCGCCAACTCTGGATCGGTC
CGGTTCATCCCCGCGCATGCGGGGAACAC	GCTCAACTTTTCGGGGACATGCAGGTGGGCAA
CGGTTCATCCCCGCGCATGCGGGGAACAC	TAAAAACTGCCGTTGGGTTTTCCTTCCGAGTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	TGGTTACGTGTTACAAAGCCGATGTGTTTTTA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGTACCGTATAAATAGCCCAAATAATAACACC
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCTTGAGCAGGTGTTCGGCCTCCATGATGTCC
GGGTTCATCCCCGCGCATGCGGGGAACAC	GACCATCGCCGCGCGCCTGGGGGTAAAGCCGG
GGGTTCATCCCCGCGCATGCGGGGAACAC	AGAGTAAGCCCGTATTTCAGACGTAGTGCTTT
CGGTTCATCCCCGCGCATGCGGGGAACAC	GAACTTCCTGATGGTGGTCGGTTTCGTCTCCG
AGGTTCATCCCCGCGCATGCGGGGAACAC	TCGATCTGTGGCGCTGTCTCCTGACCAATGGG
CGGTTCATCCCCGCGCATGCGGGGAACAC	CCAGAGTAGGCCCACGAGGTGCGTTTTTGCTA
CGGTTCATCCCCGCGCATGCGGGGAACAC	AGATACCCACCATTATAGGGAGTAGTCCATTG
CGGTTCATCCCCGCGCATGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008609.1\|WP_157040106.1\|2513641_2514250_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
NC_008609.1\|WP_011736208.1\|2535130_2535622_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_008609.1\|WP_041532291.1\|2521523_2522123_-\|DUF479-domain-containing-protein	unknown	unknown	gnl\|CDD\|225666
NC_008609.1\|WP_157039998.1\|2527397_2528186_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|187858
NC_008609.1\|WP_011736193.1\|2516274_2516940_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NC_008609.1\|WP_011736203.1\|2528760_2529885_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_008609.1\|WP_011736198.1\|2522324_2522921_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224854
NC_008609.1\|WP_011736200.1\|2523417_2524341_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_008609.1\|WP_011736199.1\|2523140_2523437_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NC_008609.1\|WP_011736195.1\|2518992_2520225_-\|YbfB/YjiJ-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340869
NC_008609.1\|WP_011736210.1\|2536383_2538801_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379314
NC_008609.1\|WP_157040107.1\|2531913_2534475_-\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NC_008609.1\|WP_011736196.1\|2520377_2521364_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|366359
NC_008609.1\|WP_011736207.1\|2534861_2535143_+\|DUF1778-domain-containing-protein	unknown	unknown	gnl\|CDD\|370057
NC_008609.1\|WP_011736194.1\|2517013_2518810_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NC_008609.1\|WP_011736209.1\|2535660_2536173_-\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NC_008609.1\|WP_011736205.1\|2530396_2531917_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|187860
NC_008609.1\|WP_011736202.1\|2528058_2528757_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|378243
NC_008609.1\|WP_041532766.1\|2514357_2516145_-\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NC_008609.1\|WP_011736204.1\|2529881_2530400_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|237559

Protein	Function_ID	Function_description	E-value
NC_008609.1\|WP_157040106.1\|2513641_2514250_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	1.06011e-11
NC_008609.1\|WP_011736208.1\|2535130_2535622_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.45652e-06
NC_008609.1\|WP_041532291.1\|2521523_2522123_-\|DUF479-domain-containing-protein	gnl\|CDD\|225666	COG3124, COG3124, Uncharacterized protein conserved in bacteria [Function unknown].	1.03251e-44
NC_008609.1\|WP_157039998.1\|2527397_2528186_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	4.49916e-65
NC_008609.1\|WP_011736193.1\|2516274_2516940_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.69792e-49
NC_008609.1\|WP_011736203.1\|2528760_2529885_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.72e-146
NC_008609.1\|WP_011736198.1\|2522324_2522921_-\|hypothetical-protein	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.000151598
NC_008609.1\|WP_011736200.1\|2523417_2524341_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.8437e-150
NC_008609.1\|WP_011736199.1\|2523140_2523437_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.00416e-59
NC_008609.1\|WP_011736195.1\|2518992_2520225_-\|YbfB/YjiJ-family-MFS-transporter	gnl\|CDD\|340869	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.15274e-65
NC_008609.1\|WP_011736210.1\|2536383_2538801_+\|AAA-family-ATPase	gnl\|CDD\|379314	pfam13654, AAA_32, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	0
NC_008609.1\|WP_157040107.1\|2531913_2534475_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.05167e-102
NC_008609.1\|WP_011736196.1\|2520377_2521364_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	1.15901e-22
NC_008609.1\|WP_011736207.1\|2534861_2535143_+\|DUF1778-domain-containing-protein	gnl\|CDD\|370057	pfam08681, DUF1778, Protein of unknown function (DUF1778). This is a family of uncharacterized proteins. The structure of one of the hypothetical proteins in this family has been solved and it forms a helix structure which may form interactions with DNA.	2.93031e-16
NC_008609.1\|WP_011736194.1\|2517013_2518810_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_008609.1\|WP_011736209.1\|2535660_2536173_-\|3'-5'-exonuclease	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	5.74882e-53
NC_008609.1\|WP_011736205.1\|2530396_2531917_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	2.74337e-124
NC_008609.1\|WP_011736202.1\|2528058_2528757_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|378243	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum.	8.28052e-56
NC_008609.1\|WP_041532766.1\|2514357_2516145_-\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NC_008609.1\|WP_011736204.1\|2529881_2530400_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|237559	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional.	1.92484e-95

>NC_008609.1|WP_011736200.1|2523417_2524341_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAEPILPPLKPLPIKDRISVIYVERGNLDILDGAFVVVDATGVRTHIPIATVACLMLEPGARVSHAAVVLAARVGCLLVWIGEAGVRLYAAGQPGGARSDRLLYQAKLALDDTARLKVVRKMYALRFKEEPPERRSVEQLRGIEGVRVRKMYELLARQYGVEWKNRNYDHSEWGSGDLPNRCLSSATACIYGICEAAILAAGYAPAVGFIHTGKPQSFVYDIADIFKFETVVPVAFRVAAKKPRNPEREVRLACRDSFRQTKLLQRIIPTIEQVLAAGEMELPKAHEEAVAPAIPNKEGIGDAGHRG
>NC_008609.1|WP_011736199.1|2523140_2523437_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MLVIVVENVPPRLRGRLGLWLVEVRAGVYVGKVSRRVREMIRDNLEQGVDEGSAVMAWSSNTESGFDFLTMGANRRIPVEMDGIKLVSFLPEDAATTS
>NC_008609.1|WP_011736198.1|2522324_2522921_-|hypothetical-protein
MTYNPDIHHRRSIRLKSYDYSSIGAYFVTVCVQGRACLLGEIAEERMLLNDAGRMVEGWWLKIPDRFPQMALEGYVVMPNHFHGIVTIVVPEHNMPPCGEGCAGYPYGGKTGHRHEGKTGHRHGGAPTVGDVMDWFKTMTTNAYIRGVKQSGWSPFAGRLWQRNYYERIIRNDAELAAIREYIDANPAQWHNDDQYPP
>NC_008609.1|WP_041532291.1|2521523_2522123_-|DUF479-domain-containing-protein
MNFLFHLYLSGNDPQLLTGNLMGDFVKGRIGDDYPPRLRNGIVLHRRIDSFAQNHPLFRQSRQRIDPCFGLWRGVLVDMFYDHLLADEWQNWSPEPLQLYLARARGMVEANRIHLPERLASLVPLIFEALLPSYVGLEGVARALERMSARVRRPNPLAGGAPELEKNITGLRDDFREFVPQVQRDVCRFLAEWSSDYRI
>NC_008609.1|WP_011736196.1|2520377_2521364_+|methyltransferase-domain-containing-protein
MTPGELLKLSGAYWSSCALHAGVKLDLFTKLAEAPATAGEIGRATDCDLRGITMLLDALAGLELLAKQGERYEATPFSADYLSKKSERYLGHIILHHHHLMDGWTRLDQAVRNGRPTWSGPSHSQDDSVRESFLMGMFNMANQSAPLITPAIDLSARKRLLDLGGGPGTYAIHFCRHNPQLRAVVFDLPSTRPIAERTVANAGLAERISFQAGDITSDPIAGGFDVLWVSQLLHGEGPASAAAILKKGVRALLPGGLVLVQEFILEDSRTAPLFPALFSLNMLVNTTEGQSYSQGELSRMLAEAGVRDIRRLELELPSGAGIITGVAG
>NC_008609.1|WP_011736195.1|2518992_2520225_-|YbfB/YjiJ-family-MFS-transporter
MKPICTRFFPFHYGWVIIATGALVIFSCLGLARYAYAMLLPGMQAALGLSYQRLGLIGTANFSGYLAAVLVTPRLARRLRPRPLIALGLMLISLSMIAISRCHGFVPILCLYTLAGVGGGFANIPMMALVTFWFRSPLRGRAAGLVLCGNGCGLIFSGALIPLLNRCYGADGWRVGWLVLGLVSLAIAAIAALFLRNSPAGMGLEPVGRPLPASPAQLIPRERVGDGALLVRLGLLYLLFGATFMVYGTFIVTSMIREYGFSEARAGLYWSWVGMFSLFSGVGFGSLSDRIGRGPGLGLVFILQSAAYLLAGLQLGPGALFLSILLYGLAVFAIPAIMTAAVGDYLGLSRAAGALATVTVFFAAGQTIGPAGAGLLGGAWGGFAPAYLLCSLLTAVAALLALRLPPPPEG
>NC_008609.1|WP_011736194.1|2517013_2518810_-|elongation-factor-4
MDISRLRNFSIIAHIDHGKSTLADRLLEFTGALSQREMQNQFLDKMDLERERGITIKAQTVRLTYRADDGNDYVLNLIDTPGHVDFTYEVSRSLAACEGGLLVVDASQGVEAQTLANVYLALDINLEVFPVLNKIDLPAADPERVIQEIEEIIGIDAHDAVLASAKEGIGTHEILEEIVKKIPPPKGDASAPLRALLFDSWYDQYQGVIILVRIFDGTLKKGDRIQLMATRSSFEALKVGVFAPTMVETQQLAAGEVGFVIAGIKEVADAKVGDTVTLQHRPCSSALEGFKEVKPMVFSGLYPIDTVQYEQLRDALAKLKLNDSSFSYDPETSLALGFGFRCGFLGLLHMEIIQERLEREFGLDLITTAPTVVYRVHRVTGEVQSIESANQMPELQHVEYLEEPFILAHIHVPNEFVGGVLALCEDKRGVQREIKYLTQNRVMIIYELPLNEIVLDFYDRLKSITKGYASLDYEHLDYRKSDLVRMNVMINGEVVDALSLILHRDKAYYRGRDLVSKMKELIPRQMFEVAIQAAIGNKIIARETVKAMRKDVLAKCYGGDITRKRKLLEKQKEGKKRMKNVGNVELPQDAFLAILKVE
>NC_008609.1|WP_011736193.1|2516274_2516940_-|signal-peptidase-I
MQEKVEAAQNATVREAEQVVKKKSIVREYAESIIIALLLALVIRTYLVQAFKIPSGSMEDTLAIGDHLLVSKFIYGTKIPFTDSQIIKVRDPRQGDVIVFEYPEDPSKDFIKRVVGTPGDVVEGRDKKVYVNGRLYRNPHEVHKEREIIPKEMNPRDSFGPVTVPANSYFVMGDNRDRSYDSRFWGFVSRDKIKGLAFIKYWSWDRETFRPRMGSIGTLID
>NC_008609.1|WP_041532766.1|2514357_2516145_-|aspartate--tRNA-ligase
MMETLGSWKRTQYCGELTGRHIGQEVILMGWALRRRDHGGLIFIDLRDREGIAQVVFDPEVNGQAHAIAETVRSEFVLAIKGEVIPRPAGTVNPNMKTGEVEIRVSECKLLSRSKALPFMLDEFSEVNENIRLKHRYLDLRRPQLQQNLILRSKVSQLTRSYLTDNGFLEMETPFLTKSTPEGARDFLVPSRINQGSFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQPEFTQIDCEMSFIDREDIIAVMEGLIATVFKQAKGVDVQLPIQHITYDEAIRRFGVDNPDLRFGMELCQLTDIVKGSGFKVFADTAAKGGIVKGINAKGCARFSRKEIDDLTEFVRIYGAKGLAYVKIENNEWRSPIAKFFTPEEIGAMNEAFGAEEGDLLFFVADKPKVVNDSLGKLRNHLASLLKLTSNDDYRFVWVTEFPLLEWDDEDKRWAAVHHPFTAPMDEDLPLLESDPGRCRAKAYDLVLNGNEIGGGSIRIHQEQVQSRMFELLGMSDESARSKFGFLLDALEFGTPPHGGIAFGLDRLIMLMTGSESIRDVIAFPKTQKGACLMSEAPSRVETKQLRELGIRLAEKQV
>NC_008609.1|WP_157040106.1|2513641_2514250_-|LysM-peptidoglycan-binding-domain-containing-protein
MVNELDQQKAQRLMPQEYQSLLETFEHGEAVFYVRRKDNEADAYYLLVLQKGAVLRENLRLLKERLLAEERKRAAEEAARLEEERLAREAAEAVERQRRQEQLKAAAEARAAQAARTHTQVRERELSPPQPSAYTVRRGETLPQIAARPEIYADASLWPLLYRANRDQIRDPKRLWPGQVLRIPRRFSRDEALEAKRFSSRH
>NC_008609.1|WP_157039998.1|2527397_2528186_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MMVRVYSRWISPCLHSPNGASVLGSCVRNGFLFLRRWPVFLSRLRLNLRCREARRDLSNPYQLHSTLCRAFSPPETKCPKGEFLWRLEPETDSSGYPRIIVQSRNIPDWGGVGVNGWIQQADPAIDLKERLKLDLLKAEQRFRFRLRANPCVTKNGKRLGLLKQDEQEKWLKRKGAQHGFCLPEFLSFDYYESSEDRIDVRISQEQMLSDKQHSDNSIRVFSVLYDGILTITEPEMFKIALKTGIGHGKVMGLGLLSVVPIF
>NC_008609.1|WP_011736202.1|2528058_2528757_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MPTLLLRLVGPMQSWGTTSRFDQRDTGKEPSKSGVVGLLAAALGIDRENWVDLEPLTCLAMGVRHDRPGVPKRDYQTAGCASTDTIIKADGTQAKGGGVVSQRFYLADAAFLVGLECDDNCLLERIHVALHNPFWTLALGRKSYVPSESIWIVDGVRDAPLLETLKRYPWIASSRSREEPPERLLVSIESDDGAGVLKMDQPLSSFAERRFGARFVRSEWIPFPQEVASVPE
>NC_008609.1|WP_011736203.1|2528760_2529885_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKTIVEIHVLQNFAPSNLNRDDTGAPKDALFGGTRRARVSSQCLKRSVREYFKDQNKGWVADRTKRVVYALKERISPVLESQKDFSEDNLLKAIEVAVSNLGSNKKVKVDKEKKSDVLLFLSPKEIDALAQVVAESYADLLKTKLSDQVVRNLNDAIDGENKSRLSVDVALFGRMLAVMPEKNQNAACQVAHAISTHAVEREFDFYTAVDDLKPEDTAGADMMGTVEFNSACFYRYAVVDWEKLLVNLQADEALATKGLRAFLEGFVVAEPTGKQNTFAAHNPPEFVAVTVRRNAAPRNLANAFETAVRVRKDESLTRKSAEGLANKAKALQSAFGGDEKTFVLNLAEATIDGFGIVMPTLNDLLDKALLAVQE
>NC_008609.1|WP_011736204.1|2529881_2530400_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSGFIEWLEGLNEKDTKVRAVLRRSLAFTPGFHVPAYPYIEPFIKNESNSWRREMFYLVAGLWAAHWREDRKGQPESLGKACARYQAASGSTSTENRFISLLDADTDQLPHRLRQMIALLKEQSIDFEELLTGLLYWNDEQKRTQNGWGRDYYRNLNNETDTVHHNDKEISE
>NC_008609.1|WP_011736205.1|2530396_2531917_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MSRFNLIDEKWIPVRFPDGAREELGIRDTLLRSKEIAAIEDPSPLVVAALHRFLLAVLYRALEGPTDIDQAKILFLSGLPGQRITAYLEKWRERFWLFDEKYPFGQNPNVSRDEIEPWTKLTAEYNATSNKVLFDHTNTKNPGAREPKECARWLLSTMTFSISGGRGYYPSPSPNAMMCIPLGRNFHETLCYCLVPYPNRNVMSGDSTLWEREPKALPLNTPKQMATGYADLYTWQSRMIRLEEQPTGEVSMMRFVAGQGFENPSSTPDPMHPYKLEKNKGILPVQFRKDRGVWRDFDSLLPDSSELAPITIQNAVKLAGKNMNYLPESVLILGLKYEPPNANLEFWRMECLSLPKALAGDRFIRTDIRQFLADAEEAQKTLWTACNSFARDLISRGDKRPVSKKDISDFVEQMPVSSVYWSTLESCFHKILSDYNLERDPEDIRCQWLKFVRDAMRTAWKQHTSSVSTGDAWAIRALVKAERPVLRKLKELNDEISKLEPSKEKL
>NC_008609.1|WP_157040107.1|2531913_2534475_-|CRISPR-associated-helicase-Cas3'
MLDVAACADAILAREPDSTRIRIAAILGLEWEIARAWILLVVACHDLGKACPGFQCKWENMTGIDTGRSPNTDINHAYVSQIALTEILLEKGWPDELAELVADAVGCHHGNRASSIRLNYLSGDRRAIGKGDWTQARLGLVDAVLNVFMPVQNPVKQTLSGPDFMLLSGLTSFADWIGSNEEWFPFGGAEECGDLPGWFQKRRHNADLALDAIGWEPRTPLSSEPKSFQQVFDFVPRPLQQAVADVLVGLSEPAIILVEAPMGEGKTEAAFFAHLELQRRFGHRGLYVALPTKATGNAMFKRTIKFIRSQGTHRKLDLQLLHGGTLLNDTFQNLRLSGIHDPETGGDIRAGEWFTNKKRALLSEYGVGTVDQALLPILPVRHNFVRLWGLANRVVVFDEIHAYDAYTGTLLIHLLRWLLALGSSVVLLSATLPPSIRRKLADAVSADLPAQETQYPRLSVFCPGKEVNQIHFEADPGRRLTLRLVGLPSDLPSIHNALVVHLAGGGMGLALLNTVQRAQDLYRLFSEGEAMEYEGHRVGKRLSDGTEVFLFHARFPVDRRQKREDQVLKAFGQSGCRDERKILIATQVAEQSLDLDFDLIATDLAPIDLVLQRAGRLWRHARSFRPVEEPVLLVAGLAGDEPPSFEKPLWWGSVYREDLLLSTWCLLHTKQNITLPDEIDSLVQAVYEEQVDIPEFLAERMNCAIFAEGKAISERQQANMAIIGFPDDASWKEVKFEKADEDEPGLHRSLVAQTRLGEPSVMAIPIFSADEFDPAKELTFDLSKDFFLRAVNLSRKGVVKKLQKRGVPEGWKKSSLLRNCFPLVLDAEGRWTEDAMVRLDDDLGLVYQSKEAE
>NC_008609.1|WP_011736207.1|2534861_2535143_+|DUF1778-domain-containing-protein
MTRTAAVERIPARMTPEVYEKISEAARTVGATLNQFIVQSALEKADAILERERVMQLSATTAEALFAIMENPPEPNDYLKHAMKQRRETLCRK
>NC_008609.1|WP_011736208.1|2535130_2535622_+|GNAT-family-N-acetyltransferase
MPEIALLNRSHDRAGFDCGTPELNAFLKTTARQHDQKGISRTFVLTDGGPVILGFFTLTLCELRAEQLPPGLAAKFPSHGLPAVRLARLAVSRREQRKGYGALLLAEAIHRTALVADQTGVIGLFVDAKDDSARQFYLRFGFLPLPGLSMHLFLPIATIRAAD
>NC_008609.1|WP_011736209.1|2535660_2536173_-|3'-5'-exonuclease
MESGLAVVDVETSGLSPRGGGRVIEVAAVLLREGKVVGELESLLRVNCSIHPAAARVHGIGWEMLRHAPEPEDVWRRFLSFVGRRPLVAHNAPFDMGFIRHELALLGLPLANRSICTLRMARRRFPELASHRLEALARHLLGSIPEDCRLHRALGDARLAARVWLAMNEP
>NC_008609.1|WP_011736210.1|2536383_2538801_+|AAA-family-ATPase
MAQDEHRVAAEKLCWRCDPNLLEFRTTQELGELEEAIGQERAFRSIEFGLGMSESGFNLYLAGESGTGRASSIMALLKKRAAGETTPHDWCYVNNFKNPDCPIALSLEAGMGRELERDLSELLAVVKHDIPKALQSKEYALEKTAIIVANQEKNNQLFAALDREAQGKEYVLQRTTSGLMMLPQLEGRNMTNEEYDNLDLEARARVDAAGNELKGRLADVLSQVMENDKGVREALARLDRELGLSAVAHHVAPLREKYAAHPRVVSHLEAVQEDILLNLEEFKNTEQESLPTGGAAGQANAFERYGVNVLVDNSENGGAPVVYEANPTYHNLFGRIDHVMQVGGVASTNFTRIKAGALHRANGGYLVFNALDVLTSPFAWDALKRCIRNGEIRIEDVMEQYRFLSIVSLKPEPVPLKAKIIMIGSPLIYHLLFHLEPDYRKFFKVKADFDSHVTRTPAVLREYALFVANHCREEKLLPFTSDGVACLLEYAARCVEDQQRLSCRFMEISDLLREADYWARRENRSRIDREIVRRTIDEKIYRGNRLEERIQELITEGTLLVDSEGSELGQVNGLSVIQLGDYSFGRPSRVTARVYMGSGRMVNIEREVKLSGPIHDKGLLILTGYLGGKYAQERPLSFSASICFEQSYEGVEGDSASSTELYALLSALSGVPLKQGIAVTGSVNQLGKVQPIGGVNQKIEGFFAICRLRGLTGEQGVIIPAINERNLMLNDEVIQAVREEKFHIWSVESIDQGIKILTGLPAGERQPDGSYPQGSINWLVDRRLSDLAEKMKGFSPEREKEKQSP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NC_008609_2	2.37\|2526767\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526767-2526798	32	NC_008609.1	328294-328325	1.0
NC_008609_2	2.38\|2526828\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526828-2526859	32	NC_008609.1	564039-564070	1.0
NC_008609_2	2.40\|2526950\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526950-2526981	32	NC_008609.1	331946-331977	1.0

1. spacer 2.37|2526767|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to position: 328294-328325, mismatch: 0, identity: 1.0

ccttgagcaggtgttcggcctccatgatgtcc	CRISPR spacer
ccttgagcaggtgttcggcctccatgatgtcc	Protospacer
********************************

2. spacer 2.38|2526828|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to position: 564039-564070, mismatch: 0, identity: 1.0

gaccatcgccgcgcgcctgggggtaaagccgg	CRISPR spacer
gaccatcgccgcgcgcctgggggtaaagccgg	Protospacer
********************************

3. spacer 2.40|2526950|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to position: 331946-331977, mismatch: 0, identity: 1.0

gaacttcctgatggtggtcggtttcgtctccg	CRISPR spacer
gaacttcctgatggtggtcggtttcgtctccg	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NC_012528	Deinococcus deserti VCD115 plasmid 3, complete sequence	278845-278876	5	0.844
NC_008609_2	2.40\|2526950\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526950-2526981	32	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	266940-266971	5	0.844
NC_008609_2	2.40\|2526950\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526950-2526981	32	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	11969-12000	5	0.844
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NC_048139	Streptomyces phage Hiyaa, complete genome	78206-78237	6	0.812
NC_008609_2	2.40\|2526950\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526950-2526981	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	420885-420916	6	0.812
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	5131-5162	7	0.781
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NZ_LN832560	Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence	78665-78696	7	0.781
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NZ_CP029836	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed6, complete sequence	6210-6241	7	0.781
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	476366-476397	7	0.781
NC_008609_2	2.4\|2524754\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524754-2524785	32	NC_016138	Pseudomonas aeruginosa plasmid pUM505, complete sequence	110099-110130	7	0.781
NC_008609_2	2.4\|2524754\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524754-2524785	32	NZ_CP030914	Pseudomonas aeruginosa strain Y89 plasmid pY89, complete sequence	37945-37976	7	0.781
NC_008609_2	2.20\|2525730\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525730-2525761	32	NC_022044	Paracoccus aminophilus JCM 7686 plasmid pAMI6, complete sequence	176353-176384	7	0.781
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP013744	Streptomyces sp. CdTB01 plasmid unnamed, complete sequence	162302-162333	7	0.781
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	MH513984	Mycobacterium phage Steamy, complete genome	28384-28415	7	0.781
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	928484-928515	7	0.781
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	267168-267199	7	0.781
NC_008609_2	2.32\|2526462\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526462-2526493	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	257817-257848	7	0.781
NC_008609_2	2.38\|2526828\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526828-2526859	32	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	590434-590465	7	0.781
NC_008609_2	2.40\|2526950\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526950-2526981	32	NZ_AP022334	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence	254677-254708	7	0.781
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	810253-810284	8	0.75
NC_008609_2	2.12\|2525242\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525242-2525273	32	NZ_CP036439	Klebsiella pneumoniae strain ABFQB plasmid unnamed1, complete sequence	38620-38651	8	0.75
NC_008609_2	2.17\|2525547\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525547-2525578	32	MK448454	Streptococcus satellite phage Javan361, complete genome	4869-4900	8	0.75
NC_008609_2	2.18\|2525608\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525608-2525639	32	NC_042127	Enterococcus phage vB_EfaS_AL2, complete genome	20439-20470	8	0.75
NC_008609_2	2.19\|2525669\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525669-2525700	32	NZ_CP027854	Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-2, complete sequence	9703-9734	8	0.75
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	823776-823807	8	0.75
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	460229-460260	8	0.75
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP025431	Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence	24099-24130	8	0.75
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	467114-467145	8	0.75
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP042268	Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence	18784-18815	8	0.75
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	MK494113	Mycobacterium phage Refuge, complete genome	30101-30132	8	0.75
NC_008609_2	2.24\|2525974\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525974-2526005	32	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	108403-108434	8	0.75
NC_008609_2	2.24\|2525974\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525974-2526005	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	990611-990642	8	0.75
NC_008609_2	2.26\|2526096\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526096-2526127	32	NZ_CP024656	Bacillus cereus strain MLY1 plasmid pMLY1.2, complete sequence	76254-76285	8	0.75
NC_008609_2	2.27\|2526157\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526157-2526188	32	MT701586	Burkholderia phage Mica, complete genome	14011-14042	8	0.75
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	KJ410133	Mycobacterium phage Jolie2, complete genome	5703-5734	8	0.75
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NZ_CP024583	Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence	153247-153278	8	0.75
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	JQ807235	Environmental Halophage eHP-14, partial genome	2876-2907	8	0.75
NC_008609_2	2.35\|2526645\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526645-2526676	32	MK675901	Shewanella phage S0112, complete genome	8371-8402	8	0.75
NC_008609_2	2.40\|2526950\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526950-2526981	32	NZ_CP041156	Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence	15085-15116	8	0.75
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NC_016110	Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence	54626-54657	9	0.719
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NZ_CP032676	Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence	94782-94813	9	0.719
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NZ_CP023550	Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence	134199-134230	9	0.719
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	1405612-1405643	9	0.719
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	1405590-1405621	9	0.719
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NZ_CP041653	Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence	97417-97448	9	0.719
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1890476-1890507	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010616	Phaeobacter inhibens strain P92 plasmid pP92_f, complete sequence	23976-24007	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010764	Phaeobacter inhibens strain P80 plasmid pP80_h, complete sequence	24955-24986	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010601	Phaeobacter inhibens strain P83 plasmid pP83_b, complete sequence	6477-6508	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010602	Phaeobacter inhibens strain P83 plasmid pP83_c, complete sequence	19273-19304	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010607	Phaeobacter inhibens strain P83 plasmid pP83_h, complete sequence	14128-14159	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010755	Phaeobacter inhibens strain P70 plasmid pP70_f, complete sequence	23976-24007	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010652	Phaeobacter inhibens strain P54 plasmid pP54_b, complete sequence	9159-9190	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010707	Phaeobacter inhibens strain P66 plasmid pP66_b, complete sequence	6477-6508	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010708	Phaeobacter inhibens strain P66 plasmid pP66_c, complete sequence	19270-19301	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP010713	Phaeobacter inhibens strain P66 plasmid pP66_h, complete sequence	23975-24006	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	MN694775	Marine virus AFVG_250M170, complete genome	10750-10781	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	MN694117	Marine virus AFVG_250M169, complete genome	43042-43073	9	0.719
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	MN693887	Marine virus AFVG_250M171, complete genome	43045-43076	9	0.719
NC_008609_2	2.10\|2525120\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525120-2525151	32	NZ_CP045419	Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence	371599-371630	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP021032	Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence	693752-693783	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	359027-359058	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NC_007765	Rhizobium etli CFN 42 plasmid p42e, complete sequence	429981-430012	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP006989	Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence	400423-400454	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013634	Rhizobium sp. N324 plasmid pRspN324d, complete sequence	372845-372876	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013588	Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence	328199-328230	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013577	Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence	332309-332340	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013549	Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence	332679-332710	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013529	Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence	345312-345343	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013534	Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence	332679-332710	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013545	Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence	332671-332702	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013503	Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence	435620-435651	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013582	Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence	345312-345343	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013509	Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence	435620-435651	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013520	Rhizobium sp. N113 plasmid pRspN113c, complete sequence	435620-435651	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013571	Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence	332309-332340	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NZ_CP013493	Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence	435620-435651	9	0.719
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	CP007642	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence	377039-377070	9	0.719
NC_008609_2	2.14\|2525364\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525364-2525395	32	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	47891-47922	9	0.719
NC_008609_2	2.16\|2525486\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525486-2525517	32	NZ_CP019319	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-7, complete sequence	29362-29393	9	0.719
NC_008609_2	2.17\|2525547\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525547-2525578	32	NC_020275	Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence	14600-14631	9	0.719
NC_008609_2	2.20\|2525730\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525730-2525761	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	305310-305341	9	0.719
NC_008609_2	2.20\|2525730\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525730-2525761	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	305274-305305	9	0.719
NC_008609_2	2.20\|2525730\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525730-2525761	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1697230-1697261	9	0.719
NC_008609_2	2.20\|2525730\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525730-2525761	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1713935-1713966	9	0.719
NC_008609_2	2.20\|2525730\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525730-2525761	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	305100-305131	9	0.719
NC_008609_2	2.20\|2525730\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525730-2525761	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	305086-305117	9	0.719
NC_008609_2	2.20\|2525730\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525730-2525761	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1678190-1678221	9	0.719
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP024583	Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence	169546-169577	9	0.719
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP017303	Rhodococcus sp. YL-1 plasmid pYLL1 sequence	141810-141841	9	0.719
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	280527-280558	9	0.719
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	366569-366600	9	0.719
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2616-2647	9	0.719
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5997003-5997034	9	0.719
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NZ_CP029832	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence	633350-633381	9	0.719
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	455292-455323	9	0.719
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NZ_AP022611	Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574	139932-139963	9	0.719
NC_008609_2	2.36\|2526706\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526706-2526737	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	673290-673321	9	0.719
NC_008609_2	2.38\|2526828\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526828-2526859	32	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	212725-212756	9	0.719
NC_008609_2	2.40\|2526950\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526950-2526981	32	NZ_CP044550	Hydrogenophaga sp. BPS33 plasmid pBPS33-1, complete sequence	71052-71083	9	0.719
NC_008609_2	2.40\|2526950\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526950-2526981	32	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	52098-52129	9	0.719
NC_008609_2	2.42\|2527072\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2527072-2527103	32	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	219183-219214	9	0.719
NC_008609_2	2.4\|2524754\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524754-2524785	32	MN813693	Mycobacterium phage Imvubu, complete genome	67688-67719	10	0.688
NC_008609_2	2.11\|2525181\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525181-2525212	32	NC_010998	Rhizobium etli CIAT 652 plasmid pA, complete sequence	335050-335081	10	0.688
NC_008609_2	2.24\|2525974\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525974-2526005	32	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	592480-592511	10	0.688
NC_008609_2	2.24\|2525974\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525974-2526005	32	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	86070-86101	10	0.688
NC_008609_2	2.27\|2526157\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526157-2526188	32	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	987788-987819	10	0.688
NC_008609_2	2.27\|2526157\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526157-2526188	32	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1144587-1144618	10	0.688
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	356817-356848	10	0.688
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	218490-218521	10	0.688
NC_008609_2	2.32\|2526462\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526462-2526493	32	NZ_CP049914	Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence	295495-295526	10	0.688
NC_008609_1	1.1\|850220\|32\|NC_008609\|CRISPRCasFinder	850220-850251	32	MG099946	Mycobacterium phage LouisV14, complete genome	30597-30628	11	0.656
NC_008609_2	2.3\|2524693\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2524693-2524724	32	NZ_CP012025	Bacillus smithii strain DSM 4216 plasmid pDSM4216, complete sequence	2623-2654	11	0.656
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	LR606148	Rhizobium sp. Q54 genome assembly, plasmid: 5	155138-155169	11	0.656
NC_008609_2	2.23\|2525913\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2525913-2525944	32	MK962640	Achromobacter phage vB_AxyP_19-32_Axy23, complete genome	40654-40685	11	0.656
NC_008609_2	2.31\|2526401\|32\|NC_008609\|PILER-CR,CRISPRCasFinder,CRT	2526401-2526432	32	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	522450-522481	14	0.562

1. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 5, identity: 0.844

gtgt-ccatcaggtcggccaggtcctgacccag	CRISPR spacer
-tgtaccagcaggtcgcccaggtcctgacctcg	Protospacer
 *** *** ******* *************. *

2. spacer 2.40|2526950|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 5, identity: 0.844

gaacttcctgatggtggtcggtttcgtctccg	CRISPR spacer
cgacttcctgctggtggtcggtttcgtgtcca	Protospacer
 .******** **************** ***.

3. spacer 2.40|2526950|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 5, identity: 0.844

gaacttcctgatggtggtcggtttcgtctccg	CRISPR spacer
cgacttcctgctggtggtcggtttcgtgtcgg	Protospacer
 .******** **************** ** *

4. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_048139 (Streptomyces phage Hiyaa, complete genome) position: , mismatch: 6, identity: 0.812

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
ttggccatcaggtcggccaggtccttgccggg	Protospacer
 ** ********************* .** .*

5. spacer 2.40|2526950|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 6, identity: 0.812

gaacttcctgatggtggtcggtttcgtctccg	CRISPR spacer
cgacttcctgctggtggtcggtttcgtgtcga	Protospacer
 .******** **************** ** .

6. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agcgtgcgcaccat---ggccgccgaccgcgacat	CRISPR spacer
---gtgaccaccaccaaggccgccgacctcgacat	Protospacer
   ***  *****.   *********** ******

7. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NZ_LN832560 (Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence) position: , mismatch: 7, identity: 0.781

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
aacctgcgcaccatgaccgcggaccgcatcac	Protospacer
*.* ***********.**** ******. **.

8. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NZ_CP029836 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed6, complete sequence) position: , mismatch: 7, identity: 0.781

agcgtgcgcaccatggccgccgaccg-cgacat	CRISPR spacer
atcctgcgcacaatggcggccgaccgccggta-	Protospacer
* * ******* ***** ******** **..*

9. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
agcgtgcgcacggtggccgccgagacgggcat	Protospacer
*********** .**********    *.***

10. spacer 2.4|2524754|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_016138 (Pseudomonas aeruginosa plasmid pUM505, complete sequence) position: , mismatch: 7, identity: 0.781

cctggtcgcctcggtgccaattccggaaacgt	CRISPR spacer
cgtggtcgcctcggtgccaacgccggcgccga	Protospacer
* ******************. **** . **

11. spacer 2.4|2524754|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030914 (Pseudomonas aeruginosa strain Y89 plasmid pY89, complete sequence) position: , mismatch: 7, identity: 0.781

cctggtcgcctcggtgccaattccggaaacgt	CRISPR spacer
cgtggtcgcctcggtgccaacgccggcgccga	Protospacer
* ******************. **** . **

12. spacer 2.20|2525730|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_022044 (Paracoccus aminophilus JCM 7686 plasmid pAMI6, complete sequence) position: , mismatch: 7, identity: 0.781

tcggtccagagatcggtgccggt--gagggtgat	CRISPR spacer
tcggtccagggatcggcgccggtcacaagctg--	Protospacer
*********.******.******   *.* **

13. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013744 (Streptomyces sp. CdTB01 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
gcgacgtccaggtcggccaggtcctcaccgag	Protospacer
*.* *  .***************** *** **

14. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MH513984 (Mycobacterium phage Steamy, complete genome) position: , mismatch: 7, identity: 0.781

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
gtgtccttccggtcggccaggtccagcgcctc	Protospacer
****** ** ************** *  **

15. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gtgtccatcaggtcggccaggtc-ctgacccag	CRISPR spacer
gtgtcaatcaggtcggtcaggtcgccggcgcc-	Protospacer
***** **********.****** *.*.* *

16. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 7, identity: 0.781

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
gttcgccgtgtagccgccatcgccgccgccaa	Protospacer
 ** . *  *************.*********

17. spacer 2.32|2526462|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 7, identity: 0.781

aatggtccgatttcgccaactctggatcggtc-	CRISPR spacer
gatgatccgatttcgccaacgct-gctcgataa	Protospacer
.***.*************** ** * ***.*

18. spacer 2.38|2526828|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.781

gaccatcgccgcgcgcctgggggtaaagccgg---	CRISPR spacer
caccgtcgccgcgcgcctggtggt---gtcggagc	Protospacer
 ***.*************** ***   *.***

19. spacer 2.40|2526950|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022334 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence) position: , mismatch: 7, identity: 0.781

gaacttcctgatggtggtcggtttcgtctccg	CRISPR spacer
cgcctttctgatggtcgtcggtttcgtctcga	Protospacer
 . ***.******** ************** .

20. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 8, identity: 0.75

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
aaggcgatcatcatggccgtcgaccgcgacac	Protospacer
*. *.*  **.********.***********.

21. spacer 2.12|2525242|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036439 (Klebsiella pneumoniae strain ABFQB plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtttgaaatcgcgcaaatcatgcctgaaagac	CRISPR spacer
gcctgaaatcgcgcaaattctgcctgatgagc	Protospacer
*..***************. ******* ...*

22. spacer 2.17|2525547|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MK448454 (Streptococcus satellite phage Javan361, complete genome) position: , mismatch: 8, identity: 0.75

ggtgagcggttgaccgattttcggagcacccg	CRISPR spacer
ggtgaggggttgacggattttcgttacaaagg	Protospacer
****** ******* ********  .**   *

23. spacer 2.18|2525608|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_042127 (Enterococcus phage vB_EfaS_AL2, complete genome) position: , mismatch: 8, identity: 0.75

ccttgcggtcaatggtttctacgttgtttggt	CRISPR spacer
cctatgaaacaatggtttctaagatgtttggt	Protospacer
***   .. ************ * ********

24. spacer 2.19|2525669|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027854 (Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgctatacccgtgccgagcgcaacatccac	CRISPR spacer
ttcggtatacccgcgccgagcgccataccata	Protospacer
**** ********.********* *.*.*

25. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.75

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
actcgcttcaggccggccagatcctgacccag	Protospacer
.. . * *****.*******.***********

26. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
ccggccagcaggtcggccacgtcctgaccgtc	Protospacer
 .* *** *********** *********

27. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025431 (Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence) position: , mismatch: 8, identity: 0.75

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
ctgtcgatcaggtcggtcaggtccttgtccga	Protospacer
 **** **********.******** ..**..

28. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
gcgatgtgcaggtcggccaggtcctcaccgag	Protospacer
*.* .   ***************** *** **

29. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042268 (Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
gcgtcgatcaggtcgggcaggtcctggtagac	Protospacer
*.*** ********** *********..  *

30. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MK494113 (Mycobacterium phage Refuge, complete genome) position: , mismatch: 8, identity: 0.75

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
gtgtccttccggtcggccaggtctagcgcctc	Protospacer
****** ** *************. *  **

31. spacer 2.24|2525974|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgtccttggtggtgtcgccgtggaagac	CRISPR spacer
aaggggatcttgttggtgtcgccgtggacgat	Protospacer
* *  * .**** *************** **.

32. spacer 2.24|2525974|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgtccttggtggtgtcgccgtggaagac	CRISPR spacer
aaggggatcttgttggtgtcgccgtggacgat	Protospacer
* *  * .**** *************** **.

33. spacer 2.26|2526096|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024656 (Bacillus cereus strain MLY1 plasmid pMLY1.2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatgttatatcgattcgttatatggattgg	CRISPR spacer
atactaatgtatccattcgttttatggattgg	Protospacer
 *  *. *.**** ******* **********

34. spacer 2.27|2526157|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MT701586 (Burkholderia phage Mica, complete genome) position: , mismatch: 8, identity: 0.75

tctcaaggccaatggcgctgccatctcgcgtt	CRISPR spacer
gctcaaggcgaatggcgcggccatcagtcgaa	Protospacer
 ******** ******** ******   **

35. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to KJ410133 (Mycobacterium phage Jolie2, complete genome) position: , mismatch: 8, identity: 0.75

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
gccgccctggttgccgccattgtcgccgccag	Protospacer
 ..*  ***** ********.**********.

36. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024583 (Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
agcgccctggtcgccgccctcgtcgccgccga	Protospacer
  .*  ***** ****** ***********.*

37. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to JQ807235 (Environmental Halophage eHP-14, partial genome) position: , mismatch: 8, identity: 0.75

tttgaa---ctggtagccgccatcgtcgccgccaa	CRISPR spacer
---gaatacctggtcgccggcatcgtcgccgcgtt	Protospacer
   ***   ***** **** ************

38. spacer 2.35|2526645|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MK675901 (Shewanella phage S0112, complete genome) position: , mismatch: 8, identity: 0.75

tggttacgtgttacaaagccgatgtgttttta	CRISPR spacer
tccttacgtgttacaaagccaatgggtatgct	Protospacer
*  *****************.*** ** * .

39. spacer 2.40|2526950|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041156 (Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

---gaacttcctgatggtggtcggtttcgtctccg	CRISPR spacer
cctga---tcctgatgctggtcggtttcatccgtg	Protospacer
   **   ******** ***********.**. .*

40. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NC_016110 (Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence) position: , mismatch: 9, identity: 0.719

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
gtgacgaccaccaaggccgccgacctcgacat	Protospacer
.  ..*  ***** *********** ******

41. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NZ_CP032676 (Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence) position: , mismatch: 9, identity: 0.719

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
ctgctgcgcaccttcgccgccgaccgcgtggt	Protospacer
    ******** * *************  .*

42. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NZ_CP023550 (Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
gtcacccgcaccatggccgcgggccgcgacgg	Protospacer
. *.. ************** *.*******.

43. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 9, identity: 0.719

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
aaaatctataccatggccgccgaacgcgagat	Protospacer
*. .* ...************** ***** **

44. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 9, identity: 0.719

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
aaaatctataccatggccgccgaacgcgagat	Protospacer
*. .* ...************** ***** **

45. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NZ_CP041653 (Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence) position: , mismatch: 9, identity: 0.719

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
cgcctgcgcaccgtggccgccgactaccgcgc	Protospacer
 ** ********.***********..* .*..

46. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 9, identity: 0.719

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
gctgtcgccaccatggccgccgagcgcgtcac	Protospacer
. .**   *************** **** **.

47. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010616 (Phaeobacter inhibens strain P92 plasmid pP92_f, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

48. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010764 (Phaeobacter inhibens strain P80 plasmid pP80_h, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

49. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010601 (Phaeobacter inhibens strain P83 plasmid pP83_b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

50. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010602 (Phaeobacter inhibens strain P83 plasmid pP83_c, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

51. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010607 (Phaeobacter inhibens strain P83 plasmid pP83_h, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

52. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010755 (Phaeobacter inhibens strain P70 plasmid pP70_f, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

53. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010652 (Phaeobacter inhibens strain P54 plasmid pP54_b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

54. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010707 (Phaeobacter inhibens strain P66 plasmid pP66_b, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

55. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010708 (Phaeobacter inhibens strain P66 plasmid pP66_c, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

56. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010713 (Phaeobacter inhibens strain P66 plasmid pP66_h, complete sequence) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
caaccttcaaccaaaagaaggaaacactcatg	Protospacer
 ******.***********.**** *  *

57. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MN694775 (Marine virus AFVG_250M170, complete genome) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
agttctttaaataaaagaaagaaagaagtaga	Protospacer
*. .****** .***************.. *

58. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MN694117 (Marine virus AFVG_250M169, complete genome) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
agttctttaaataaaagaaagaaagaagtaga	Protospacer
*. .****** .***************.. *

59. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MN693887 (Marine virus AFVG_250M171, complete genome) position: , mismatch: 9, identity: 0.719

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
agttctttaaataaaagaaagaaagaagtaga	Protospacer
*. .****** .***************.. *

60. spacer 2.10|2525120|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045419 (Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence) position: , mismatch: 9, identity: 0.719

gtatgtggctatgggatcgcccgtaacatcct	CRISPR spacer
ctgcgctgctaagggatcgccagtaacatcgc	Protospacer
 *..*. **** ********* ******** .

61. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021032 (Rhizobium sp. NXC14 plasmid pRspNXC14b, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

62. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

63. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

64. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006989 (Rhizobium sp. IE4771 plasmid pRetIE4771c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

65. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013634 (Rhizobium sp. N324 plasmid pRspN324d, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

66. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013588 (Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

67. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

68. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

69. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013529 (Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

70. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

71. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

72. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013503 (Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

73. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013582 (Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

74. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013509 (Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

75. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013520 (Rhizobium sp. N113 plasmid pRspN113c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

76. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

77. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013493 (Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

78. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to CP007642 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803a, complete sequence) position: , mismatch: 9, identity: 0.719

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcga	Protospacer
***.*** ***************  .   .**

79. spacer 2.14|2525364|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.719

ctctccagcatcccccggacacacgcggcgga	CRISPR spacer
ttgcgcttgatcgcccgggcacacgcggcgga	Protospacer
.* . *   *** *****.*************

80. spacer 2.16|2525486|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019319 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-7, complete sequence) position: , mismatch: 9, identity: 0.719

cccctgtatggggcgggcgtagttttccagca	CRISPR spacer
gtcgtccatggggcgggcgtggttgtccagat	Protospacer
 .* * .*************.*** *****

81. spacer 2.17|2525547|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_020275 (Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence) position: , mismatch: 9, identity: 0.719

ggtgagcggttgaccgattttcggagcacccg	CRISPR spacer
ggcagcaggttgaccgattgtcggcgcaccac	Protospacer
**...  ************ **** *****

82. spacer 2.20|2525730|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tcggtccagagatcggtgccggtgagggtgat	CRISPR spacer
gcggtccagagatccgtgctggtgttgagcaa	Protospacer
 ************* ****.****  *.  *

83. spacer 2.20|2525730|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tcggtccagagatcggtgccggtgagggtgat	CRISPR spacer
gcggtccagagatccgtgctggtgttgagcaa	Protospacer
 ************* ****.****  *.  *

84. spacer 2.20|2525730|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tcggtccagagatcggtgccggtgagggtgat	CRISPR spacer
gcggtccagagatccgtgctggtgttgagcaa	Protospacer
 ************* ****.****  *.  *

85. spacer 2.20|2525730|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tcggtccagagatcggtgccggtgagggtgat	CRISPR spacer
gcggtccagagatccgtgctggtgttgagcaa	Protospacer
 ************* ****.****  *.  *

86. spacer 2.20|2525730|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

tcggtccagagatcggtgccggtgagggtgat	CRISPR spacer
gcggtccagagatccgtgctggtgttgagcaa	Protospacer
 ************* ****.****  *.  *

87. spacer 2.20|2525730|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tcggtccagagatcggtgccggtgagggtgat	CRISPR spacer
gcggtccagagatccgtgctggtgttgagcaa	Protospacer
 ************* ****.****  *.  *

88. spacer 2.20|2525730|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

tcggtccagagatcggtgccggtgagggtgat	CRISPR spacer
gcggtccagagatccgtgctggtgttgagcaa	Protospacer
 ************* ****.****  *.  *

89. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024583 (Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
cgctccatcaggccggccaggccctggagccg	Protospacer
   *********.********.****.  * *

90. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 9, identity: 0.719

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
atccgcgccaagtcggccaggtcatgacccac	Protospacer
.* . *..**.************ *******

91. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
atccgcgccaagtcggccaggtcatgacccac	Protospacer
.* . *..**.************ *******

92. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 9, identity: 0.719

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
gtcaccgtggtggccgccatcggcgccgccag	Protospacer
 *..   ****.********** ********.

93. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
gtcaccgtggtggccgccatcggcgccgccag	Protospacer
 *..   ****.********** ********.

94. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
gtcaccgtggtggccgccatcggcgccgccag	Protospacer
 *..   ****.********** ********.

95. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
ccggcggaggaagcggccatcgtcgccgccaa	Protospacer
.. * .  ** *** *****************

96. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 9, identity: 0.719

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
gacgacacggtagccgccgtggtcgccgccat	Protospacer
  .**  .**********.* **********

97. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022611 (Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574) position: , mismatch: 9, identity: 0.719

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
ccggggctggttgccgccatcggcgccgctga	Protospacer
.. *..***** ********** ******..*

98. spacer 2.36|2526706|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.719

agtaccgtataaatagcccaaataataacacc	CRISPR spacer
cgcaacgtataaattgcccaaatgataagctg	Protospacer
 *.* ********* ********.****  .

99. spacer 2.38|2526828|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 9, identity: 0.719

gaccatcgccgcgcgcctgggggtaaagccgg	CRISPR spacer
caccaacgccgcgctcctgggggtgctccatg	Protospacer
 **** ******** *********.   *  *

100. spacer 2.40|2526950|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044550 (Hydrogenophaga sp. BPS33 plasmid pBPS33-1, complete sequence) position: , mismatch: 9, identity: 0.719

gaacttcctgatggtggtcggtttcgtctccg	CRISPR spacer
cgtatcggtgttggtggtcggtgtcgtctccg	Protospacer
 .  *.  ** *********** *********

101. spacer 2.40|2526950|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 9, identity: 0.719

gaacttcctgatggtggtcggtttcgtctccg	CRISPR spacer
tttctcgctgatggtcgtcggtctcgtctcgt	Protospacer
   **. ******** ******.*******

102. spacer 2.42|2527072|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccagagtaggcccacgaggtgcgtttttgcta	CRISPR spacer
ccgcccgagggccacgaggtgcgtatttgcgt	Protospacer
**.    *** ************* *****

103. spacer 2.4|2524754|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MN813693 (Mycobacterium phage Imvubu, complete genome) position: , mismatch: 10, identity: 0.688

cctggtcgcctcggtgccaattccggaaacgt	CRISPR spacer
cctggtcgccccggtgccacttcatcgggcca	Protospacer
**********.******** ***   ...*

104. spacer 2.11|2525181|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 10, identity: 0.688

gcaaacgcccatttgatagccgccgcacctga	CRISPR spacer
gcagacgaccatttgatagccgcgttcggcaa	Protospacer
***.*** ***************  .   ..*

105. spacer 2.24|2525974|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 10, identity: 0.688

atgtcgtccttggtggtgtcgccgtggaagac	CRISPR spacer
atgtcggccttggtggtgtagcccgcccggtt	Protospacer
****** ************ ***     .* .

106. spacer 2.24|2525974|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

atgtcgtccttggtggtgtcgccgtggaagac	CRISPR spacer
gccaccgtgttggtggtgtcaccgaggaagac	Protospacer
..  *  . ***********.*** *******

107. spacer 2.27|2526157|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcaaggccaatggcgctgccatctcgcgtt	CRISPR spacer
gaaggaggccaatggcgccgccatgtcgctcg	Protospacer
    .*************.***** **** .

108. spacer 2.27|2526157|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcaaggccaatggcgctgccatctcgcgtt	CRISPR spacer
gaaggaggccaatggcgccgccatgtcgctcg	Protospacer
    .*************.***** **** .

109. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 10, identity: 0.688

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
tcccgcgacgtcgccgccatcgccgccgccaa	Protospacer
*.. .    ** **********.*********

110. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tttgaactggtagccgccatcgtcgccgccaa	CRISPR spacer
ccagtcctggtagccgccatagacgccgctgc	Protospacer
.. *  ************** * ******..

111. spacer 2.32|2526462|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049914 (Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aatggtccgatttcgccaactctggatcggtc	CRISPR spacer
ctcagtgcgatttcgccaactcttgatggcat	Protospacer
  ..** **************** *** *  .

112. spacer 1.1|850220|32|NC_008609|CRISPRCasFinder matches to MG099946 (Mycobacterium phage LouisV14, complete genome) position: , mismatch: 11, identity: 0.656

agcgtgcgcaccatggccgccgaccgcgacat	CRISPR spacer
tatcaacgcaccgtggccgcctaccgcgaacc	Protospacer
 ..  .******.******** *******  .

113. spacer 2.3|2524693|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012025 (Bacillus smithii strain DSM 4216 plasmid pDSM4216, complete sequence) position: , mismatch: 11, identity: 0.656

aaacctttaaccaaaagaaagaaagaaaccgc	CRISPR spacer
tccatcataaccaaaaaaaagaaagataccat	Protospacer
    .. *********.********* ***..

114. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 11, identity: 0.656

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
accgtcatcaggtcggccagaccctgacgatc	Protospacer
..  .***************..******

115. spacer 2.23|2525913|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to MK962640 (Achromobacter phage vB_AxyP_19-32_Axy23, complete genome) position: , mismatch: 11, identity: 0.656

gtgtccatcaggtcggccaggtcctgacccag	CRISPR spacer
tcgtccatcaggtaggccagggcctcgttgct	Protospacer
 .*********** ******* *** ...

116. spacer 2.31|2526401|32|NC_008609|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 14, identity: 0.562

tttgaactggtagccgccatcgtcgccgccaa------------	CRISPR spacer
------------gccgtcaccgtcgccgccaacgtcgccgccaa	Protospacer
            ****.**.************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

177218 : 184530

Moraxella_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011734122.1\|177218_178382_+	ATP-binding protein	A0A0R6PCP6	Moraxella_phage	1.3e-41	36.1
WP_011734123.1\|178378_179221_+	hypothetical protein	NA	NA	NA	NA
WP_157039900.1\|179220_179379_+	hypothetical protein	NA	NA	NA	NA
WP_011734125.1\|179737_180544_+	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	3.0e-29	34.7
WP_011734126.1\|180540_180795_+	hypothetical protein	NA	NA	NA	NA
WP_041532066.1\|180814_181096_+	YheU family protein	NA	NA	NA	NA
WP_011734128.1\|181104_182685_+	exodeoxyribonuclease VII large subunit	M1NLU2	Moumouvirus	9.4e-19	32.6
WP_011734129.1\|182677_182884_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_011734130.1\|182936_183212_+	integration host factor subunit alpha	A0A1P8CWT5	Bacillus_phage	3.0e-13	41.6
WP_011734131.1\|183241_183481_+	hypothetical protein	A0A0C5AEJ6	Paenibacillus_phage	7.5e-13	60.7
WP_157039901.1\|183610_183748_+	hypothetical protein	NA	NA	NA	NA
WP_041532447.1\|183789_184530_+	radical SAM protein	A0A1C9EG97	Acidianus_two-tailed_virus	1.4e-12	29.2

DBSCAN-SWA_2

1926123 : 1982596

Bacillus_phage(25.0%)

plate,tRNA,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011735689.1\|1926123_1927248_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.9e-92	46.8
WP_011735690.1\|1927348_1928380_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_083761216.1\|1928391_1929618_-	SpoIID/LytB domain-containing protein	Q2XU88	Pseudomonas_phage	4.4e-24	33.7
WP_011735692.1\|1929886_1930072_+	hypothetical protein	NA	NA	NA	NA
WP_011735694.1\|1931191_1932217_+	cobalamin biosynthesis protein CbiM	NA	NA	NA	NA
WP_011735695.1\|1932287_1933100_+	cobalt ECF transporter T component CbiQ	NA	NA	NA	NA
WP_011735696.1\|1933102_1933873_+	energy-coupling factor ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.6e-14	23.4
WP_011735697.1\|1933951_1934614_-	DUF1318 domain-containing protein	NA	NA	NA	NA
WP_011735698.1\|1934695_1938265_-	hypothetical protein	NA	NA	NA	NA
WP_011735699.1\|1938508_1939465_-	2-hydroxyacid dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	2.1e-29	34.5
WP_011735700.1\|1939715_1942505_-	hypothetical protein	NA	NA	NA	NA
WP_011735701.1\|1942513_1944814_-	hypothetical protein	NA	NA	NA	NA
WP_011735702.1\|1944845_1947224_-	hypothetical protein	NA	NA	NA	NA
WP_011735703.1\|1947220_1949665_-	hypothetical protein	NA	NA	NA	NA
WP_011735704.1\|1949661_1950039_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_157039971.1\|1950035_1950380_-	hypothetical protein	NA	NA	NA	NA
WP_157039972.1\|1950379_1950973_-\|plate	baseplate assembly protein	A0A127AW40	Bacillus_phage	2.3e-10	36.4
WP_011735707.1\|1950959_1952018_-	phage late control D family protein	NA	NA	NA	NA
WP_011735708.1\|1952014_1952305_-	hypothetical protein	NA	NA	NA	NA
WP_011735709.1\|1952326_1953097_-	hypothetical protein	NA	NA	NA	NA
WP_011735710.1\|1953099_1959765_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_011735711.1\|1959761_1961630_-	ATP-binding protein	NA	NA	NA	NA
WP_011735712.1\|1961626_1962907_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_011735713.1\|1962913_1963765_-	hypothetical protein	NA	NA	NA	NA
WP_011735714.1\|1963761_1964502_-	hypothetical protein	NA	NA	NA	NA
WP_011735715.1\|1964522_1965023_-\|tail	phage tail protein	NA	NA	NA	NA
WP_011735716.1\|1965056_1967465_-\|tail	phage tail sheath protein	J9PVC2	Bacillus_phage	2.2e-35	36.1
WP_011735659.1\|1967650_1968826_+\|transposase	IS4-like element ISPepr3 family transposase	NA	NA	NA	NA
WP_011735718.1\|1969187_1969694_+	chemotaxis protein CheX	NA	NA	NA	NA
WP_011735719.1\|1970001_1971153_+	PLP-dependent transferase	NA	NA	NA	NA
WP_011735720.1\|1971149_1972295_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_011735721.1\|1972399_1973353_+	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	2.1e-74	50.3
WP_041532687.1\|1973451_1974252_+	sulfur carrier protein ThiS adenylyltransferase ThiF	NA	NA	NA	NA
WP_083761217.1\|1974318_1975401_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_011735724.1\|1975421_1976174_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_011733975.1\|1976402_1977761_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.4e-07	44.4
WP_011735725.1\|1978113_1979181_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_157039973.1\|1979380_1979755_+	hypothetical protein	NA	NA	NA	NA
WP_011735727.1\|1979875_1980961_+	sel1 repeat family protein	NA	NA	NA	NA
WP_011735728.1\|1981048_1981555_+	hypothetical protein	NA	NA	NA	NA
WP_157039974.1\|1981585_1982596_-\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

2006217 : 2015463

Brevibacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011735751.1\|2006217_2008404_-	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	4.9e-74	30.8
WP_011735752.1\|2008429_2009203_-	UPF0149 family protein	NA	NA	NA	NA
WP_011735753.1\|2009211_2009880_-	SOS response-associated peptidase	C7BGE4	Burkholderia_phage	2.3e-11	35.1
WP_011735754.1\|2009940_2010501_-	cysteine hydrolase	NA	NA	NA	NA
WP_011735755.1\|2010513_2010732_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_157040096.1\|2010728_2012318_-	exodeoxyribonuclease VII large subunit	M1NLU2	Moumouvirus	4.5e-21	34.2
WP_041532233.1\|2012317_2012572_-	hypothetical protein	NA	NA	NA	NA
WP_011735758.1\|2012571_2013363_-	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	1.1e-31	37.9
WP_011735759.1\|2013359_2013644_-	integration host factor subunit alpha	A0A1P8CWT5	Bacillus_phage	5.6e-15	49.4
WP_011735760.1\|2013687_2015463_-	ATP-dependent helicase	E3T5J8	Cafeteria_roenbergensis_virus	2.5e-20	23.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_008607

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_008607_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008607_1

189566-189823

Unclear

Consensus_repeat	Method
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	PILER-CR
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	CRISPRCasFinder
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	CRT

3 spacers

DEDDh,c2c4_V-U1

The CRISPR arrays of NC_008607_1

>merge|NC_008607|1|189566-189823|PILER-CR,CRISPRCasFinder,CRT
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAACGCAATCATGGCCACCTCCAGCTTCCACAGATTTGCTTTGTCTCCACTACAAAGCGGCGGAGCACGCATGTCAACGTGTCATTGTTGCCTCCCACTTCCGCAGATTCAACATGTCTCCACTACAAAGCGGCGGAGCACGCATGTCAACAATAAAGACAGGGGGAGTCATGGAACCACTTATTGCCGAGTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC

>NC_008607|1|1|189566-189823|PILER-CR
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	GCAATCATGGCCACCTCCAGCTTCCACAGATTTGCTTT
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	GTGTCATTGTTGCCTCCCACTTCCGCAGATTCAACAT
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	AATAAAGACAGGGGGAGTCATGGAACCACTTATTGCCGA
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC

>NC_008607|1|1|189566-189823|CRISPRCasFinder
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	GCAATCATGGCCACCTCCAGCTTCCACAGATTTGCTTT
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	GTGTCATTGTTGCCTCCCACTTCCGCAGATTCAACAT
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	AATAAAGACAGGGGGAGTCATGGAACCACTTATTGCCGA
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC

>NC_008607|1|1|189566-189823|CRT
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	GCAATCATGGCCACCTCCAGCTTCCACAGATTTGCTTT
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	GTGTCATTGTTGCCTCCCACTTCCGCAGATTCAACAT
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC	AATAAAGACAGGGGGAGTCATGGAACCACTTATTGCCGA
GTCTCCACTACAAAGCGGCGGAGCACGCATGTCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008607.1\|WP_011733912.1\|183003_184272_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NC_008607.1\|WP_011733926.1\|196642_197065_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223435
NC_008607.1\|WP_011733921.1\|192911_193277_-\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_011733910.1\|179408_180182_-\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_011733915.1\|186632_186875_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_008607.1\|WP_049759862.1\|192092_192551_-\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_011733918.1\|188646_189555_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|224117
NC_008607.1\|WP_011733923.1\|194842_195112_+\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_041533032.1\|193299_193506_-\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_157040156.1\|192624_192843_-\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_011733925.1\|196174_196630_+\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_011733913.1\|185068_185515_-\|MucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|368446
NC_008607.1\|WP_011733922.1\|193521_194730_-\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_041533030.1\|187120_187381_+\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_011733914.1\|185595_186510_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236397
NC_008607.1\|WP_011733919.1\|189988_191983_-\|transposase	c2c4_V-U1	-	gnl\|CDD\|284650
NC_008607.1\|WP_157040155.1\|186917_187124_+\|hypothetical-protein	unknown	unknown	unknown
NC_008607.1\|WP_157040163.1\|187374_188586_+\|type-II-toxin-antitoxin-system-HipA-family-toxin	unknown	unknown	gnl\|CDD\|377920
NC_008607.1\|WP_011733924.1\|195124_196126_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367788
NC_008607.1\|WP_157040154.1\|180644_182933_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273632

Protein	Function_ID	Function_description	E-value
NC_008607.1\|WP_011733912.1\|183003_184272_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	5.40699e-58
NC_008607.1\|WP_011733926.1\|196642_197065_+\|hypothetical-protein	gnl\|CDD\|223435	COG0358, DnaG, DNA primase (bacterial type) [DNA replication, recombination, and repair].	0.00628103
NC_008607.1\|WP_011733913.1\|185068_185515_-\|MucR-family-transcriptional-regulator	gnl\|CDD\|368446	pfam05443, ROS_MUCR, ROS/MUCR transcriptional regulator protein. This family consists of several ROS/MUCR transcriptional regulator proteins. The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti. This gene encodes a 15.5-kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid and is necessary for succinoglycan production. Sinorhizobium meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of alfalfa nodules. MucR from Sinorhizobium meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan.	6.17514e-45
NC_008607.1\|WP_011733915.1\|186632_186875_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.81119e-11
NC_008607.1\|WP_011733914.1\|185595_186510_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|236397	PRK09182, PRK09182, DNA polymerase III subunit epsilon; Validated.	4.90554e-106
NC_008607.1\|WP_011733919.1\|189988_191983_-\|transposase	gnl\|CDD\|284650	pfam07282, OrfB_Zn_ribbon, Putative transposase DNA-binding domain. This putative domain is found at the C-terminus of a large number of transposase proteins. This domain contains four conserved cysteines suggestive of a zinc binding domain. Given the need for transposases to bind DNA as well as the large number of DNA-binding zinc fingers we hypothesize this domain is DNA-binding.	1.40691e-06
NC_008607.1\|WP_157040154.1\|180644_182933_+\|AAA-family-ATPase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	3.53039e-121
NC_008607.1\|WP_011733918.1\|188646_189555_+\|DNA-binding-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	3.25505e-06
NC_008607.1\|WP_011733924.1\|195124_196126_+\|hypothetical-protein	gnl\|CDD\|367788	pfam04055, Radical_SAM, Radical SAM superfamily. Radical SAM proteins catalyze diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.	0.00801436
NC_008607.1\|WP_157040163.1\|187374_188586_+\|type-II-toxin-antitoxin-system-HipA-family-toxin	gnl\|CDD\|377920	pfam07804, HipA_C, HipA-like C-terminal domain. The members of this family are similar to a region close to the C-terminus of the HipA protein expressed by various bacterial species. This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis. When expressed alone, it is toxic to bacterial cells, but it is usually tightly associated with HipB, and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products.	8.38554e-54

>NC_008607.1|WP_011733918.1|188646_189555_+|DNA-binding-protein
MQQVASYEMVAGACEKLEREGLKITGRSVLTVTGGSLATVLGHIKRWRLNKESAPSLVPLEIPTDVQGVILRALGQAQVDAADKLKEEIDQAGAREAEALEGLSGAERRIEQLTDELNAIRTRAEADRQSTEKSEAVANERIDTLLARVQELETERRQLIESAEASRTETAKAQLQIQRADEATKKAESRAEHLEAQLADAQNGRVAAEKAQAVAEQRSNDQSEALVELRATLLEAKGESKATISEQKTEILALRKTVADLEGRVTGLLADKSSLEKALALEEERNNFAQRAGAITPEEQVG
>NC_008607.1|WP_157040163.1|187374_188586_+|type-II-toxin-antitoxin-system-HipA-family-toxin
MMTITPHTLAVWADDQRAGLLDRSIDQHQYVFAYDPAAESPSAQVSLTMPVRLESWASRDLHPIFQMNLPEGALLEAIRRTVSKLIGEDDLTILRVTGGNQVGRNRFSLAADPAPGIVETKESLDELLSYPDTEELFNDLVAKYALRSGVSGVQPKVMLDATERGTAAVGGYIVKSWGSEYPQLAANEFFCMTAAKRAGLSVPEFHLSENGGLFVMKRFDLGERGEPLGFEDICSLQALATTRKYSSTYERVARTIKDFVSPAALLVAREQFFASLVLSCMVRNGDAHLKNFGVLYDRPGQLVQLAPVYDVVTTTAYIPKDVPALSLFGTKKWWSRRALERFAVSHLSLPVGRVGQILEKVAEAVTDTRGIVSAYMVEHPEYREVGNLQLASWEVGVANLVLI
>NC_008607.1|WP_041533030.1|187120_187381_+|hypothetical-protein
MRKAEVSTPGQALAYLVDCTLATISHMAMLKSRKKSEYERQIAIAQNGVDWMVQMNIDPSTTRAAEIISQGLTVADWAKGFTLGES
>NC_008607.1|WP_157040155.1|186917_187124_+|hypothetical-protein
MEKSMKEPGWNVSCNSRNGMAHWWESSPLKPEFVRSHCGKVEKKENLQGLSHELRRCKVCAKHGEETA
>NC_008607.1|WP_011733915.1|186632_186875_+|helix-turn-helix-transcriptional-regulator
MLFELGKKIREERKHRKLSQAQVAAALGMSRTTISQIEMGTVQDIGVRKLIRVLEYLGLELQVRAAGAPPTLEELRSEQP
>NC_008607.1|WP_011733914.1|185595_186510_-|DNA-polymerase-III-subunit-epsilon
MNVPKHEMDALKLLEASQKYRILRRLDIMQHPGLTGKPITGKTRRVGLCIDTETTGFNFSDDVIIELGIVAFEYDAMTGEISRIVDTYSGFEDPCRPLDPEVTAVTGITDDMLAGQSLDDAAVGKIVSQASLCFCHNCKFDRSFLERRFPEFEKLPFACTMSQIDWKNELVTSRTLEYLLYKCGACFIDAHRALNDAEGLLGLLLENLPVSKLSVFKTVLENARKPSFKIMAYNSAYSAKDSLRDRKYHWEPGGDGKIKTWWTVVSEKDLDNEITFLNNIAYTNGTDDVEIIKIDAFNRFSRRE
>NC_008607.1|WP_011733913.1|185068_185515_-|MucR-family-transcriptional-regulator
MTQSLVELTASIVSAHASGSQMSKEDLLGEINAVYSSLKALEGGTPEALEASEPASQAPALTIRKAFKDDQIGCMICGKTGFKTLTRHLKQAHDLKPGQYRKQFNISPTQALTAKNYSEARRAAAKENNLAANLEKARAVRASKKTKK
>NC_008607.1|WP_011733912.1|183003_184272_+|methyl-accepting-chemotaxis-protein
MLKSWFYQQSIATKMFISVAFVMVFAIVMGSFSIYQISTFIDLLQQYATKYNIPNEIVAKEISQFETLRNLIAGMLVLGVIVCYYVAHFTIKNVICKSLWYAQQALERIADGDLTQNINVKSNEEIGMLFAAMKRIIEKLREVSSDINRLTHTLAENSNSLLQTTQEMNHNAHEQAHQTSQVSSASLEMSQTLLDIAGSAEQATVAATETAEAANNGLAAVAEVMGEMQKIANSVQESSTTIGKLGESSVQIGNIVGTIEDVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTARATREIAEMIKNIQKDTEQAVAGMASSKRDADGGLARTEEANQALEAIVRASSNSMDIIVRIATATEEESAVTAEVSSSIEKIATGTRSTEESAEQIEESAKLLSALSADLEKSAAWFRV
>NC_008607.1|WP_157040154.1|180644_182933_+|AAA-family-ATPase
MSQTIKAKVTGSRVYNNNWVVLSCEHGGRSFRATGNILQDPESIVGVVCSMEGTWDSHARYGKSFRLSSLTPDGSEMFFFLTRVVKVGEKPAQSMIDMFSDAELTSIMETPARHNELLNVKGIGGSRLGKIIGSWQKYRHIKMLSDFLSPYGLSPGLITRVYNHFEDRAIVIIKGNPYSLTHVNGIGFKKADDVALRLGTDPHDPFRLAACLQFVMASMADDSGNTLVKPEDVISQAAKELDSENGSNIERIELAGELEQMEGREEIVRLGDMLALKRHHATEKRICEALRRRVELPPVPIKSPSETQRFIESIEQKIGITFSEEQVDSIKMVAAGHRTIAVTGYAGTGKSTVSKALIQLLLSKFDEDQVCCMALSGIASDRIRTLSGFNSFTIHSALGWRGQEFEHGPDNQLGYQVIVLDEGSMVNSFIMRNLIEAVDRDAVLILMGDPGQLPPIGAGDPFRNIIESGIIPVARLTRIYRQSDDSVLSFFANDIRRGVVPTGYLQEEGFKDFQFVQKNLPGNYFRLSDKDKVPLREENSQRIIEFIEAKMRAISPYIKNPILDFQLLSPIRKGPLGTEALNDVAQRVFNPGEHEGRAVQVGSVTFKPGDKVVHTLNRDMQIVKAHSLSDYHNNIDSSETKRVFNGSVGVILDGDSDNRELLVAYPEGFIAKYDSLLLSAGVLEMAYALTTHKCQGSEYRFVLIPISSAHTIMLTAQWLYTAVTRAKQKVLMVGQKYMFERACKSLTETRRTTVLEKLISLA
>NC_008607.1|WP_011733910.1|179408_180182_-|hypothetical-protein
MSDVVEFVEYTKSITRNIVIRERIKDYEKDLKAAKMELEDHNYEVDTSEVPWYIEAQGGERRTLKECADLQTEEWRNIEIKLLDAIHLAETKLSSVRSDLARSEEFREWRIIVDGFESGTTLAPSSSEALKVAITKIDRSDYPYVETTMWISVKVTCDESGEEDLDTVALHPDEPGCVDGKNHDWQSPHKVVGGREDYPGMWPNEAGVIIREVCGNCGKYKVTNTWALDVATGAHGLRSVSYEKPDDFSLQWLADKR
>NC_008607.1|WP_011733919.1|189988_191983_-|transposase
MKRVTITIDGEQTKGIVIGTIAANHTAAEWLLTASVSAKSAKVRFDPEEAVAETSSLVMIAPTRTEKYLYLVPDEQVQPVTTIVRKYGLLSPLDWDCPDYPAGDAFEHLFLQNKLWNDLVTIEREHRAKYRELIGSDEETAQMDTEIASIKDRLSVLDEGRKKLRVEHRKKKCPEIDCLDENIKKLKSELKAVASKAKETRAAAKDRIRAAGNDIENLEKDRQAAVIKAYNNSGLWWGNYNAVLESYKKARIKALKDGAELKYHRFDGSGRFTNQIQGGMSVQDLLEGNRNVASLRLVSSGELGDISGKKPPSLDLQSVGSRRDSREYGILAITLYTGTDEQSKKFRRTLSFPVILHRPLPEGATLKSLSVHRKRVGTDFVWSVVFTFTTDCPTYDQRSSTGNRCGLNLGWKKQAGGGLRVATIYDGSDARHITLPQAIIDGLDYVNGDLQGRIDSAANENHAWLLEQWGGDELPESLQELRSMLRRSKRPHPAKFAKAVIAWRNYPEYLGDARDEAEQRRKATKRLTIEMAHKREKLLRRRMDFYRNTAKQLTSVYDVICLDKMDLRRLALLEKGDGTPNELTKIARKQRQQAAISELRECLSKAAAKNGTQIEQVSTASSATCSACKGKMEQVDGIMWRCRECRALVDQDINAAANLFREVL
>NC_008607.1|WP_049759862.1|192092_192551_-|hypothetical-protein
MAAAKRALERQAERLPLFADQIRENQPSPEERINQMDDGMTWIVGEWRELRANHWRKGRRMYSALPDAMRADVREKWRSCSWPGTGTYFITFVRWYKHHGFVYLDRPEEAIQYDRERLARTIIILRERGRTAQQGRNLEKAVVVGGVLKTRE
>NC_008607.1|WP_157040156.1|192624_192843_-|hypothetical-protein
MKAKWHEAYRLARILNASSPTNEDPLARLPGLQWKAWLVVRFKRNAVDGLTIPLRARFEAMKIVGEILECSD
>NC_008607.1|WP_011733921.1|192911_193277_-|hypothetical-protein
MNILPRNTWRYVTQPYKDRKGNNCIHKELVSPGDYTRIDKNIEERLAVPTPVKGPFTMHNNGYGTLQISDGNNRMVTAVSFYQDGRDPSQQVEAEEALWLGNVIVEALNKAAEAAASDESE
>NC_008607.1|WP_041533032.1|193299_193506_-|hypothetical-protein
MIATKEKERVLAECISACIEAEKAYGTPEYPFQAGRIAACRTTFGDREKLKRLVMADPRAVATWRDYF
>NC_008607.1|WP_011733922.1|193521_194730_-|hypothetical-protein
MKQLNIFDMLAVAPQGHPDGTYFVLKKDAFKRVRNAWLKLDVILGPPKFGYRNLRTGWGLIQPDYVGAHWIDVPKDELPAVLAGHASGEMATVDSYLSADMKTFDWGWRKAKRRSAIDGAVSVGRNPGGGEIRLKKVPGRKAKWIYEVDIYSADGSLFTRRELGLWMGMMFFGDVETAQKGVELTFGEAVAELVKMIRDADSGTDFGKDRSWETTTAETLARKLVYMKRASNGKPLELEEYLRLLELNGLRNRTGRFSEDRSLNLSLDHLYAELVVKYLAFGAENEDVWADGPTEWTQAKNGGWLKGAYVVGQAASTRKGNRGRYGVRPAFGTIAPKVRGVFKDAERAIAAVDTQVFSRSFEERHFDGFKEDFRQIKREIFKAGLRLYEMNHPHGEQNQMAA
>NC_008607.1|WP_011733923.1|194842_195112_+|hypothetical-protein
MMAFADKQTQCCSRGCEIIVCEPDERLVRCIINGVHKAPLTQGQREWLINEADWAGEGSYPAEEAGELTDVELAKRTLSAWQEYVQTHF
>NC_008607.1|WP_011733924.1|195124_196126_+|hypothetical-protein
MRIGLIDFDSKIPNLSLMKLSAFYKARGCKVTLNNFSPSQVDRVFCSVIFTRNRRSADLLRGVYGERISFGGTGYDVAARLPEEIESMRPDYDLYSQEFIYSRINRGIGKKETKLAKAQTLIDAGIGRLSTGCPRSCAFCCIPTKEPEFRRVGEVADILNPRSNVLVLLDNNLLALPESLDILRELRERKLTVDIAQGIDMRLMTDELARELASIRHLRSLHFAWDLMESEATVLSGLSVLTKRIKSWRLMCFVLTGFNTSFDEDEYRVRKLINKGVDPFVMVHDSSSDVKLKHYQRYINARIYKACDRFEDYLPWQSVRCQRGSGSLFEGNT
>NC_008607.1|WP_011733925.1|196174_196630_+|hypothetical-protein
MLFKIEIKKRLHGAWYNYPPLELKGLTIRQILEFIEQQDFVVKIEQGMGKTVYIVGKAETFHEYRGDNNQKATFFTVPMTLGLWNDSPLLDIVWPPFGFIDSGPESNDDKMRDEQANLQESLSILKSMERESAPTSHLKKKHAYRGLRYAA
>NC_008607.1|WP_011733926.1|196642_197065_+|hypothetical-protein
MTTIPPEVLDQIKAELRRQFADEGCCPICRQKKRPSFTAERKKTMSEAMKVPRNRVSPTTTKILLAISQASETFTLTEISNKTDTSKNTVREIVRRLAIAQELRIGAEVDSRHKTSKFGTGVFWNQLEKDGNIPLKSLPS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NC_008607_1	1.1\|189602\|38\|NC_008607\|PILER-CR,CRISPRCasFinder,CRT	189602-189639	38	NC_008607	Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence	189602-189639	1.0
NC_008607_1	1.2\|189676\|37\|NC_008607\|PILER-CR,CRISPRCasFinder,CRT	189676-189712	37	NC_008607	Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence	189676-189712	1.0
NC_008607_1	1.3\|189749\|39\|NC_008607\|PILER-CR,CRISPRCasFinder,CRT	189749-189787	39	NC_008607	Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence	189749-189787	1.0

1. spacer 1.1|189602|38|NC_008607|PILER-CR,CRISPRCasFinder,CRT matches to NC_008607 (Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence) position: , mismatch: 0, identity: 1.0

gcaatcatggccacctccagcttccacagatttgcttt	CRISPR spacer
gcaatcatggccacctccagcttccacagatttgcttt	Protospacer
**************************************

2. spacer 1.2|189676|37|NC_008607|PILER-CR,CRISPRCasFinder,CRT matches to NC_008607 (Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgtcattgttgcctcccacttccgcagattcaacat	CRISPR spacer
gtgtcattgttgcctcccacttccgcagattcaacat	Protospacer
*************************************

3. spacer 1.3|189749|39|NC_008607|PILER-CR,CRISPRCasFinder,CRT matches to NC_008607 (Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence) position: , mismatch: 0, identity: 1.0

aataaagacagggggagtcatggaaccacttattgccga	CRISPR spacer
aataaagacagggggagtcatggaaccacttattgccga	Protospacer
***************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

34274 : 95581

Clostridioides_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041532999.1\|34274_37232_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_011733773.1\|37718_39428_-	DUF3560 domain-containing protein	A0A2I7RQ20	Vibrio_phage	1.1e-25	39.7
WP_041533000.1\|39486_39669_-	hypothetical protein	NA	NA	NA	NA
WP_011733774.1\|40564_41128_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	3.7e-18	36.9
WP_011733775.1\|41907_42561_+	hypothetical protein	NA	NA	NA	NA
WP_011733776.1\|42568_43687_+	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	4.2e-29	27.6
WP_157040137.1\|44172_45846_+	hypothetical protein	NA	NA	NA	NA
WP_011733778.1\|45988_46255_-	hypothetical protein	NA	NA	NA	NA
WP_011733779.1\|46247_49514_-	hypothetical protein	A0A2R2ZGH5	Clostridioides_phage	1.2e-07	25.9
WP_011733780.1\|49514_52844_-	helicase	A0A2K5B253	Erysipelothrix_phage	9.1e-40	25.7
WP_011733781.1\|53145_53703_+	recombinase family protein	A0A1V0E035	Clostridioides_phage	8.1e-34	50.8
WP_041533001.1\|53779_54088_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041533002.1\|54351_54873_+	DUF2846 domain-containing protein	NA	NA	NA	NA
WP_157040138.1\|55091_55520_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_011733784.1\|55866_56277_-	hypothetical protein	NA	NA	NA	NA
WP_011733785.1\|56547_57000_-	hypothetical protein	NA	NA	NA	NA
WP_011733787.1\|57535_58159_-	high-affinity nickel-transporter	NA	NA	NA	NA
WP_011733788.1\|58191_59226_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_011733789.1\|59456_60125_-	DUF1007 family protein	NA	NA	NA	NA
WP_011733790.1\|60234_60894_-	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_011733791.1\|60931_62926_-	ferrous iron transport protein B	NA	NA	NA	NA
WP_157040158.1\|62962_63679_-	DUF3793 family protein	NA	NA	NA	NA
WP_011733793.1\|63777_66153_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.7e-141	40.7
WP_011733796.1\|66843_67242_-	DUF302 domain-containing protein	NA	NA	NA	NA
WP_041533041.1\|67266_67728_-	signal peptidase II	NA	NA	NA	NA
WP_011733798.1\|67853_68201_-	hypothetical protein	NA	NA	NA	NA
WP_011733800.1\|68707_70078_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.3e-29	27.5
WP_011733801.1\|70070_70763_-	response regulator transcription factor	NA	NA	NA	NA
WP_011733802.1\|70813_71209_-	hypothetical protein	NA	NA	NA	NA
WP_086003652.1\|71205_71574_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	4.3e-15	37.4
WP_011733804.1\|71783_72404_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.5e-36	50.5
WP_011733805.1\|72560_75470_+\|transposase	Tn3 family transposase	A0A125RQ78	Bacillus_phage	4.5e-59	23.6
WP_011733806.1\|75583_75808_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_011733807.1\|75839_76034_-	ferredoxin	NA	NA	NA	NA
WP_011733808.1\|76111_76747_-	hypothetical protein	NA	NA	NA	NA
WP_011733809.1\|76805_78014_-	anaerobic nitric oxide reductase flavorubredoxin	NA	NA	NA	NA
WP_011733810.1\|78070_78778_-	iron-sulfur cluster repair di-iron protein	NA	NA	NA	NA
WP_011733811.1\|78838_79276_-	PAS domain S-box protein	NA	NA	NA	NA
WP_011733812.1\|79468_81070_-	hydroxylamine reductase	NA	NA	NA	NA
WP_011733813.1\|81164_81731_-	HPP family protein	NA	NA	NA	NA
WP_011733814.1\|81749_82739_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_011733815.1\|82810_84352_-	ammonia-forming cytochrome c nitrite reductase subunit c552	NA	NA	NA	NA
WP_011733816.1\|84376_85441_-\|transposase	IS5-like element ISPepr6 family transposase	NA	NA	NA	NA
WP_011733817.1\|85617_86076_-	cytochrome c nitrite reductase small subunit	NA	NA	NA	NA
WP_011733818.1\|86439_87429_+\|transposase	IS1595-like element ISPepr2 family transposase	NA	NA	NA	NA
WP_041533005.1\|87526_88117_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011733820.1\|88181_89441_+	TolC family protein	NA	NA	NA	NA
WP_011733821.1\|89467_90637_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_011733822.1\|90633_91836_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_011733823.1\|91839_92541_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-45	45.1
WP_011733824.1\|92649_93216_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	7.9e-61	62.6
WP_011733825.1\|93385_95581_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.2e-237	57.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_008609

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_008607

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection