CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_009523	Roseiflexus sp. RS-1, complete genome	107 crisprs	csx21,csm3gr7,csx19,csm2gr11,csx10gr5,cas10,cas6,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL,csa3,c2c9_V-U4,cmr1gr7,csx1,Cas9_archaeal,csx3,cas8b2,cas4,DinG,DEDDh,cmr3gr5,cmr5gr11,cmr4gr7,cmr6gr7,PD-DExK,RT,csx15,cas8c	52	120	3	1

1. NC_009523

CRISPR-Cas detection and classification

Crispr_ID: NC_009523_1

• CRISPR_ID: NC_009523_1
• CRISPR_location: 205780-205870
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_1

Consensus_repeat	Method
GGGCAAAGCCCGCCTGCGCGGGC	CRISPRCasFinder

spacers of NC_009523_1

>1.1|205803|45|NC_009523|CRISPRCasFinder
TAGACCGGACTTAATTCTTAAAGATCATAAGCCCCCGGCTATGCA

CRISPR arrays and Neighbor proteins around NC_009523_1

CRISPR arrays

The CRISPR arrays of NC_009523_1

>merge|NC_009523|1|205780-205870|CRISPRCasFinder
GGGCAAAGCCCGCCTGCGCGGGCTAGACCGGACTTAATTCTTAAAGATCATAAGCCCCCGGCTATGCAGGGCAAAGCCCGCCTGCGCGGGC

>NC_009523|1|1|205780-205870|CRISPRCasFinder
GGGCAAAGCCCGCCTGCGCGGGC	TAGACCGGACTTAATTCTTAAAGATCATAAGCCCCCGGCTATGCA
GGGCAAAGCCCGCCTGCGCGGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011954945.1|183976_185500_+|SPASM-domain-containing-protein	unknown	unknown	gnl|CDD|274955
NC_009523.1|WP_011954949.1|193519_194914_-|transcriptional-regulator	unknown	unknown	gnl|CDD|294013
NC_009523.1|WP_011954958.1|207691_208075_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011954953.1|201995_204902_-|peptidase-M16	unknown	unknown	gnl|CDD|223957
NC_009523.1|WP_011954959.1|208321_208759_+|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239646
NC_009523.1|WP_011954947.1|190437_191811_-|ATP-binding-protein	unknown	unknown	unknown
NC_009523.1|WP_011954951.1|198140_198647_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011954961.1|209536_210004_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040912.1|209180_209534_+|DUF983-domain-containing-protein	unknown	unknown	unknown
NC_009523.1|WP_011954950.1|194913_197271_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_085979421.1|200409_201467_+|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011954955.1|206214_206679_-|hypothetical-protein	unknown	unknown	gnl|CDD|270045
NC_009523.1|WP_011954946.1|187336_190423_-|ATP-binding-protein	unknown	unknown	gnl|CDD|379062
NC_009523.1|WP_049767447.1|206864_207227_+|response-regulator	unknown	unknown	gnl|CDD|381116
NC_009523.1|WP_011954962.1|209936_211517_-|TM0106-family-RecB-like-putative-nuclease	unknown	unknown	gnl|CDD|274603
NC_009523.1|WP_157041217.1|211513_212719_-|cysteine-desulfurase-NifS	unknown	unknown	gnl|CDD|224029
NC_009523.1|WP_011954957.1|207303_207705_-|anti-sigma-regulatory-factor	unknown	unknown	gnl|CDD|340411
NC_009523.1|WP_011954954.1|206010_206211_-|hypothetical-protein	unknown	unknown	gnl|CDD|234777
NC_009523.1|WP_041334523.1|199853_200108_-|hypothetical-protein	unknown	unknown	gnl|CDD|375901
NC_009523.1|WP_011954952.1|198723_199686_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011954945.1|183976_185500_+|SPASM-domain-containing-protein	gnl|CDD|274955	TIGR04064, rSAM_nif11, nif11-like peptide radical SAM maturase. Members of this family are radical SAM enzymes that occur co-clustered with nif11-related ribosomal natural product (RNP) precursors described by TIGRFAMs model TIGR03798. Homology within the bacteriocin family reflects largely constraints on the leader peptide, tied to processes such as cleavage and export, and members associate with various families of maturation enzyme. The gene symbol assigned is nlpM, for Nif11-class Leader Peptide family Radical SAM Maturase. [Cellular processes, Toxin production and resistance].	1.58774e-32
NC_009523.1|WP_011954949.1|193519_194914_-|transcriptional-regulator	gnl|CDD|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	3.88073e-12
NC_009523.1|WP_011954958.1|207691_208075_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	2.20234e-32
NC_009523.1|WP_011954953.1|201995_204902_-|peptidase-M16	gnl|CDD|223957	COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only].	0
NC_009523.1|WP_011954959.1|208321_208759_+|NUDIX-hydrolase	gnl|CDD|239646	cd03674, Nudix_Hydrolase_1, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, U=I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.03817e-37
NC_009523.1|WP_085979421.1|200409_201467_+|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011954955.1|206214_206679_-|hypothetical-protein	gnl|CDD|270045	cd13225, PH-like_bacteria, Pleckstrin homology (PH)-like domains in bacteria (PHb). Pleckstrin homology (PH) domains were first identified in eukaryotic proteins. Recently PH-like domains have been identified in bacteria as well. These PHb form dome-shaped oligomeric rings with a conserved hydrophilic surface at the intersection of the beta-strands of adjacent protomers that likely mediates protein-protein interactions. It is now thought that the PH domain superfamily is more widespread than previous thought and appears to have existed before prokaryotes and eukaryotes diverged. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.	8.83977e-06
NC_009523.1|WP_011954946.1|187336_190423_-|ATP-binding-protein	gnl|CDD|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.93165e-08
NC_009523.1|WP_049767447.1|206864_207227_+|response-regulator	gnl|CDD|381116	cd17574, REC_OmpR, phosphoacceptor receiver (REC) domain of OmpR family response regulators. OmpR-like proteins are one of the most widespread transcriptional regulators. OmpR family members contain REC and winged helix-turn-helix (wHTH) DNA-binding output effector domain. They are involved in the control of environmental stress tolerance (such as the oxidative, osmotic and acid stress response), motility, virulence, outer membrane biogenesis and other processes. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.01144e-32
NC_009523.1|WP_011954962.1|209936_211517_-|TM0106-family-RecB-like-putative-nuclease	gnl|CDD|274603	TIGR03491, TIGR03491, RecB family nuclease, putative, TM0106 family. Members of this uncharacterized protein family are found broadly but sporadically among bacteria. The N-terminal region is homologous to the Cas4 protein of CRISPR systems, although this protein family shows no signs of association with CRISPR repeats.	4.93113e-35
NC_009523.1|WP_157041217.1|211513_212719_-|cysteine-desulfurase-NifS	gnl|CDD|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	0
NC_009523.1|WP_011954957.1|207303_207705_-|anti-sigma-regulatory-factor	gnl|CDD|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	1.90595e-43
NC_009523.1|WP_011954954.1|206010_206211_-|hypothetical-protein	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	0.00759175
NC_009523.1|WP_041334523.1|199853_200108_-|hypothetical-protein	gnl|CDD|375901	pfam18475, PIN7, PIN domain. This is a bacterial PIN-like domain of unknown function.	1.64033e-24
NC_009523.1|WP_011954952.1|198723_199686_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	6.80024e-21

Protein sequences

>NC_009523.1|WP_011954953.1|201995_204902_-|peptidase-M16
MNITHGFELLREQQISELNTLARLYRHVATGAELLSLINDDENKVFGITFRTPPPDSTGVAHILEHSVLCGSEKYPLKKPFVELLKGSLKTFLNAITFSDKTVYPVASTNTKDFYNLIDVYLDAVFHPRITPEVLQQEGWRYELNEDGSLGYRGVVFNEMKGANASPDRVLYVAVQRSLFPGHIYSVDSGGDPAVIPNLTYEQFRAFHERYYHPSNALIFFYGDDDPEERLRLLERVLAPFERISVDATIPLQPPFREPQRLEVPYPAGPNSADKHMVTVNWLLPDPPDVEEALALDILEHALVGTPASPLRKALIDSGLGENLTGSGFARLRQTFFTVGLKGVKGEHVHAVENMIIDTLGRLVHDGIDPQTIEAAVNTVEFQLRENNTGSYPRGLVVLFRALDTWLYGEDPLAPLMFEAPLRAVKQRLHNGGRFFERLIEERLLRNPHRTTVVLVPDLELTNRQNAAERERLAAIRATLDDAQIEQIATTAARLKQIQETPDPPEALALLPSLTIADLDRKIKTTPTEEMHIGATRVLLHDLFTNGIVYIDVGMNLHTLPQELLPYVTIFGRALLETGTQHDDIIQLTQRIGRDTGGIFPQTFTSAMRGQSDGAAWLFLRGKAILEKSDALLDILHDVVHSARLDNRDRIRQIVREERASREASLIPAGHTVVNTRLRARFNEADWAAEQIGGVSYLLFLRRVERAIDEEWDTVYTVLERMRTLLVNRSALLVNVTVDAAGWDRFRPRLEAFLDRLPAGESVLAAWNPQPGAPSEGLLIPANVNYVAKGASLYRLGYRLHGSALVVTRYLMTTWLWEQIREQGGAYGGFCSFDPRSGMFSYTSYRDPNLLRTIEVYDRSAEFLRQLELSEKELTRAIIGVIAELDAYQLPDARGFTAMARHIVGDDDAYRQQVRDEVLGTTPADFRAFADVLDMLRENAALVVMGNEDAITAANQERALFAAITRVL
>NC_009523.1|WP_085979421.1|200409_201467_+|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_041334523.1|199853_200108_-|hypothetical-protein
MPAQRNYVLIDYENVQPDLMPLLSETNIYVIIFVGAAQKSVPVDFAAAMQRLGSRATYIKLSGNGSNALDFHIAFYLGVLAVRD
>NC_009523.1|WP_011954952.1|198723_199686_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPYTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRARAQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTINRTEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011954951.1|198140_198647_-|hypothetical-protein
MRAKQVKVHRFEDVTDIPIIKKKLAPPLPSASTHESGKNEHSAAPAFVNATIETVAPAMNGNIAQVHPPAATVETNAQTCSSPASQNASNPSQLSRNERIAFVVVHLQKHRVTRPAKVATLRNHIHALFRKQLTDLEVDDIVIGMKRKNLISIGDDQRITYHLAVTVP
>NC_009523.1|WP_011954950.1|194913_197271_-|hypothetical-protein
MLLALWILPALITALACLFIYLEMVKHGADAARTQRWRDRFVPVLFFGIAISFVFYAVLARIEEDIAPLQANHTTSVPLPGRTLFVRHPRLIRADAIATTPPELVVWLKRDASAAPLTVTVELSSSSTLIFTDETGAPVVPPLTLTDDGDLRPQRLGMRFLEDDTGDLTTIEVAVRDTTGQSASGTIRIAHETQSAFCWRAFKNRFFGDAGVGLAIASAVFGVGWQVRNERRQTRQAQQSERIREIRDLFDRDLVEWHLAAETLKKEARRNWEDPARSELDKTLDNQRAQLTGVAMKEQVICLLRDAAEYYRAGDGRRLNAVLDLLKLAHPGVFRDVDKPLPLPAVDWQSVETTLRICAALLHYFQMDAREFIVAVLEMLASLPGDQKGRQYLVQAIRLPGNVSEDIREVTKLAFTDPRIRQRLVDQLPLTYKWPLFTPHSTNIVRSEPISDWLETNELSVNPFDPEELQSCREFWERIALPRNQQPAIIQARTPVVGNRFDCWIAALALSNELRKPTERCMPAPVALSDFDPATHGDMAHFIGRAAGERRCAALAQQPGLLLWLPEDEQVLLAEWMLWIGGSLPALRRLLRNNGLQDDVSGQIVLHRLNGLLSHAAPTTPDARTMLEWLTIRPPGIERTHLIVIDDVGDDRARQFARLIPDLQRAGIGCTLFTASAYPGGFGQSGSIRLRWSEQELLSLLDSAVAVSRGPVQHLLDLVELSDPSADEEGFVMDILKHARGSFARSLTIFRRALAHHLAVYLDQNDPAYRFLNENDFIAAVFDIR
>NC_009523.1|WP_011954949.1|193519_194914_-|transcriptional-regulator
MEQVDDHNTVIATEALDTLAAEREPHLQPLVFVEPSRYTAYTGMRSLVIVGDGGSGKTALRLALTRQVAPENAPPTHLVATWQPELIEDVRGSPAVRIFVQQALRTCATTLLTTLLRHPDLFHRAPPTVQMSLHWFLQAHIVRDRQHLLAAIEEQSAAEEGKALCRRLLSDPAAPVLYPDATEQRIIAHLTGALQRIGMRGVWVMIDGFEPWLRGSTAPLSDLVVAMLSTLELLDLNGFAIKMFVPRSLEPDITSSWGVVKGRIEIDTLTWTPEQLMVITERHIAAKIGRPSLRLSDLCVADQDVRNWLQRYGGGTPRGWLRLIRPLVDAFAASGASHPLSDNDWHTLKRTHPPRLSIDLTTDRVFIGDAEVGGLQPRPYRLLRYLYENRSRRVPRSELYYRAYLGLTEEPRTRDDHGWEDPADWTNVLDNAILRLRRIIEPDPRHPIYILTDRGWGVKLEHAI
>NC_009523.1|WP_011954947.1|190437_191811_-|ATP-binding-protein
MALTDPPAYRSDLFVNRENEIKAVTNALQNIARGDSEQMRTIVFRGERGLGKSWLALHLHRFVLREAAPRLLPGYHIVSLLINLTPPPEGLTVDKQEWHITHDDAHRIAGEDETHYEALLQKLVAWVAEQLGIVRAPYAPVRDLSAWLAQDVKHKLESEPHLVICLILDSVFETNWNFLDQLERYLLAAFAALPRVLIVMTGRGRPYLWKSPYLRTEREEQSLTPFSTEQVAEQIRRSLSNAPDLSPAVAGLSDEALTRLARRVIDLGGGYPLTNELLASAFVRQALDRLPEGGSLEQALDRETIDASVLENVANRLLEVVPGDQRHRLDEIFNALCVLKDGFRENEMPYLLAALRNTQPEGSAYTIAAMRELRDRLIETNLVRWQDKRYVLDEAVRTVLEQYLKLQRHNVWRRLHEHAADLYATWAQKYPGSRGYYDQRAAYHRGVLEKDAGHSDE
>NC_009523.1|WP_011954946.1|187336_190423_-|ATP-binding-protein
MNEEERYTGAWATPDLIGRRAILDQIDTALSDASGPSIIALYGPGGIGKTRILNDTLRRSRGGVFLAQQAVDLYDMRYHSSLALASAIYASLGVADGSPFRTFEEKREQQYRAQTSGDVRQIAVATQDALQAFIDDVNRLSQSQHVVLALDTLERIAYGATEQRLPFQVAAAWQWLVETVPDWGNVTVLVAGRNQIRHLFPDLERRPAIRLTTIEVGPFTLEETDDYLDAVARAAKQAGEQAVADTLRSLTPQRREQVYRYSGGAPIMLALLADYISIAGFGQLPGILDIETDPARAREDLERQIVERMMGAEGIRDTLPMLGRAPKGVDDELLAHLLDIPVDEARRRLEAIKRLSFIKVRGSRYFLHDEMYTILTRQIYSAPDDAPEAERVNTAIIEWYQGQIDEHHKQLDTLYAPIEQERRFVQVTPQLDHARIASVQQEIQRLLVERMYYTLRLDPLDGFREYVRLSFYTTFTGNTMLDIQIQAELLVFLDERDPSGQQLSIDGLEREIVLGVATIHPVVRLYAENDYAGVIQYAQRLRQEEPQTLQTAGGSTEAALNIWEALARLGRASKEEQDLERADRLLNAAEQILIPIMYDKSEARRWRARSLLALAYHARGFGLRVRGQVRPAIDAYRRAAVLWRRVDVPICLAWTLNNLGFVESEEGNFAAGQALVEESLAIRRKLGARALIGLSYSTLARILILAGDYRSAATSAERALRLFQAVEYRLGQGLALRNLAEALRRSVTRDDDPAERVQILREARDYAHAAYERFAAMGDRLRQIESLIEEGCALRDLIGIKHDHPSLLKEDLDTLMQQSVQAQERAADLARQTNNVFRQVDACVNIAYAGFNGERLDIIEKGLVAAREAIPADYLITRRGLPDLHNPNIQNRQLFTQLARIHMLIGSRLFKHYHRLVQSAGNVKDVAQEYARIAASFVDEISADFQSVNDCLRYAVHHYALAFEYDRLYSLSDPGGLRAKNTVYNWLKDLSAEELDIVAQTVHAIERDYPVGRSAMRDLLESRALLIE
>NC_009523.1|WP_011954945.1|183976_185500_+|SPASM-domain-containing-protein
MNDSGAAPIRSMPVILCAMDLESHMANAVETDCFAPPETDCACPDDGTPPLLTANIDPTVAYALPALHTDALPGGWVLAFNPHGAAGVVVLDQAAWMLLDRFRQPRRLVDAADEGDDVGMVQRGMLRLARLGLIQRVDRPSGVQRKASETLTVWLHITNACNLRCDYCYINKTPDSMDEARGRQAIDAVIRSAMAHQFRRVKLKYAGGEATLNLPLIVAFHQYARDCATRHNLALDGVVLSNGVALGDRQIRQIRDSGLRLMISLDGIGALHDAQRRFVNGRGSFAHVAQTLDRLAQHGVIPSLSITLSRRNLAGLPETVAYALDRGLPFSLNFYRANDYAAADADLAYGEEEITAAMKAAFAVIEQRLPPYRLFGALLDLVRFDAPHDHPCGVGSAYMVIDQRGRVAKCHMEIKRTVTDVDAPDPLRLIREDATGIQRIPVDAKEGCRTCMWRSWCAGGCPALTYRVTGRFDVRSPNCRIYQALFPAVLRLEGLRLLRYAGGLRLA
>NC_009523.1|WP_011954954.1|206010_206211_-|hypothetical-protein
MKHETVLHCPICHNDSDALMPDDACVVVYPCPQCGALLRPKPGDCCVFCSYADDLCPPEQARTARE
>NC_009523.1|WP_011954955.1|206214_206679_-|hypothetical-protein
MPGSDTLFDVLYNPNMRKRAGGPMSSGWPVYDNETQYRQIVTYLLPGETLYAVYDCKGIGTGFVGITDRRLIFYDQGIIAKKRMMVSLPYQNILGVAVADEGMIFQSGEIIILTAFGRFAFEFRGPDKAAWIYRFLLGQILAQKSPTPTAGYGR
>NC_009523.1|WP_049767447.1|206864_207227_+|response-regulator
MRILIVDDNRDILDLVQRVLLAEGHEIITARNGVEALQREAEYTPDLIVLDINLPFLDGWEVCRQIKARRSVPVIILSVRAEAVDLERSRAAGADDHVLKPFDLDDLVNRIARLTNTLPG
>NC_009523.1|WP_011954957.1|207303_207705_-|anti-sigma-regulatory-factor
MAQAKVAPIRSDLDIVIARTLARDTAKALGFGAIDQARIATAVSELARNIFLYAGTGTVTIREIERGGRKGIEIICEDQGPGIADIDLVMQDGYSTSRGMGMGLPGARRLMDEFDIKSAEGQGTIIHCRKWRT
>NC_009523.1|WP_011954958.1|207691_208075_-|STAS-domain-containing-protein
MESLRIPILKIGDVLIASIQVALHDASAVQFKDDLLQKIYDTKARGLIVDLTAVDVVDSFIGRLISDIASMAGLMGTKVVITGLQPAVAITLVELGLELTGVMTALNLEKGLAMLRRQAEEDADGTG
>NC_009523.1|WP_011954959.1|208321_208759_+|NUDIX-hydrolase
MPAITRDFTATTFVVHERRTLLLLHRKLNMWLPPGGHIDPHELPDEAAIREVREEAGLEVELLMTGSVLGNVRVLPQPYCILLEDIAPGHQHIDLIYFARVRGGVLNPSERETQAARWVTWEELDAPDISEDIRELGRRAIELCS
>NC_009523.1|WP_157040912.1|209180_209534_+|DUF983-domain-containing-protein
MKRIVRVLFLSLLLICPACERGRMFRSRFTMNVRCPVCGMVFERGAGEFSGGMAINTVATSSVAVTGAALAFFTDLPVLPLILALTLVSTVFALWFYRHARALWAGILFLTGSVRED
>NC_009523.1|WP_011954961.1|209536_210004_+|hypothetical-protein
MTISDALRDVVVRLVLERPAARRSISAWADALAASGAKLKARMAASADTPANRRQLRHIIGLERWGQRRMRVALGEPFINDEMDGYQPPADLNLAELIDVFLNTRDETVQIARQCAADPRAETALVRHNQLGPLSIRGWLRYLDMHASLEARRLR
>NC_009523.1|WP_011954962.1|209936_211517_-|TM0106-family-RecB-like-putative-nuclease
MTNEQPQPVTTVPSFPPSWIDADDLAWLARCERRIWLDQRSVHPPPVTPTADARARMALRAAHKQRILAGIPNLEDLSALDWSERVIQTRRLMQRGAAAIAGAALEAPLADHTLRGAPDLLIRTATTSGAWSYRPVAIVLHTRPTRWDRLLLDAWRWLVRQTQGEAIDPPGELWLGASGDGPALVKRQSASLAPFTAQVWRAAVIATREAPPVWFDNDHCPFCTWRTACDAAARETRDIALLPGLSRRQGIALRQRGIHRIEQVVTLEPGVLATLPDRLPYGGERLRLQAQALLSDQPQPTSTGAPQLPHVGFFLDIESDPLTREPWAFGLAGAPGDRMIIVVDPTSDGRSTALNGVPLILAPDVREGWRRVLAAVQERGGRLAHWGEAERLMLEQSAEPSVHRKLAPLLVDARHELGVRVVLPTPRLSDQRGGGLKAIARWLGCTWSPGADHWTLAWEAYQRWVRQPSPLAAIEMLAPAIVYLIADVEALAAVWRWLEAFVGSISANDGLPDWRAYRDTAATLEC
>NC_009523.1|WP_157041217.1|211513_212719_-|cysteine-desulfurase-NifS
MTDRLIYLDHAATTPVDPVVLEAMIPYFTTHFGNPSSIYRIGRAALHALDEARDQIASILGASPREIIFTGSGSESDNLAIRGVALAQRQAGRGSHIITSAIEHHAVLHTVEHLQAFGFEATILPVDPKGLVQPEYLRAALRPDTVLVSIMYANNEIGTIQPIAELGAICRERGIPFHTDAVQAPGALPLDVRALNVDLMTIAAHKFYGPKGVGALYVRRGTPLLPQITGGGQERRRRAGTENVPGIVGMATALRLAEERRAHDSAHCARLRDRLVAGILERVPGSRLNGHPTQRLPNNASLSFEGVEGESILLLLDQHGIAASSGSACTSGSLEPSHVLIALARASGTERAPEIAAALPGAVRFTFGRENTDADVDAVLEMLPGIVAQLREMTVTSQGGV

Crispr_ID: NC_009523_2

• CRISPR_ID: NC_009523_2
• CRISPR_location: 246614-246722
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_2

Consensus_repeat	Method
AAGCCCTCGGCTAGGCGAGGCAAAGCCCGCCTGCGCGGGCT	CRISPRCasFinder

spacers of NC_009523_2

>2.1|246655|27|NC_009523|CRISPRCasFinder
GTAGCGGATTATTTGTTCAAAGACCAT

CRISPR arrays and Neighbor proteins around NC_009523_2

CRISPR arrays

The CRISPR arrays of NC_009523_2

>merge|NC_009523|2|246614-246722|CRISPRCasFinder
AAGCCCTCGGCTAGGCGAGGCAAAGCCCGCCTGCGCGGGCTGTAGCGGATTATTTGTTCAAAGACCATAAGCCCTCGGCCAGGCGAGGCAAAGCCCGCCTGCGCGGGCT

>NC_009523|2|2|246614-246722|CRISPRCasFinder
AAGCCCTCGGCTAGGCGAGGCAAAGCCCGCCTGCGCGGGCT	GTAGCGGATTATTTGTTCAAAGACCAT
AAGCCCTCGGCCAGGCGAGGCAAAGCCCGCCTGCGCGGGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955004.1|254294_254600_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	unknown
NC_009523.1|WP_011954991.1|241309_242980_-|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|227335
NC_009523.1|WP_011954987.1|238833_239115_+|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl|CDD|376528
NC_009523.1|WP_041331273.1|244388_244883_+|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl|CDD|214939
NC_009523.1|WP_011955000.1|249915_250326_+|response-regulator	unknown	unknown	gnl|CDD|381100
NC_009523.1|WP_011954998.1|247403_247661_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011954995.1|244945_245521_+|GTPase-domain-containing-protein	unknown	unknown	gnl|CDD|206648
NC_009523.1|WP_011954993.1|243870_244158_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955005.1|255135_255447_-|YggT-family-protein	unknown	unknown	gnl|CDD|376765
NC_009523.1|WP_157040915.1|254799_254937_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040914.1|253003_254275_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|236901
NC_009523.1|WP_011954989.1|239784_240537_+|chromosome-segregation-and-condensation-protein-ScpA	unknown	unknown	gnl|CDD|234635
NC_009523.1|WP_011954999.1|247811_249875_+|response-regulator	unknown	unknown	gnl|CDD|236848
NC_009523.1|WP_011954996.1|245578_246385_+|DUF4388-domain-containing-protein	unknown	unknown	gnl|CDD|373017
NC_009523.1|WP_011954992.1|243105_243549_+|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|223149
NC_009523.1|WP_011954990.1|240564_241296_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011954988.1|239266_239779_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955001.1|250855_252373_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl|CDD|234854
NC_009523.1|WP_011955006.1|255566_256001_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955002.1|252380_253007_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	unknown	unknown	gnl|CDD|235067

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011954991.1|241309_242980_-|PAS-domain-S-box-protein	gnl|CDD|227335	COG5002, VicK, Signal transduction histidine kinase [Signal transduction mechanisms].	1.81767e-63
NC_009523.1|WP_011954992.1|243105_243549_+|Hsp20/alpha-crystallin-family-protein	gnl|CDD|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	2.80262e-36
NC_009523.1|WP_041331273.1|244388_244883_+|roadblock/LC7-domain-containing-protein	gnl|CDD|214939	smart00960, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	6.07574e-11
NC_009523.1|WP_011955000.1|249915_250326_+|response-regulator	gnl|CDD|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.65563e-30
NC_009523.1|WP_011954995.1|244945_245521_+|GTPase-domain-containing-protein	gnl|CDD|206648	cd00882, Ras_like_GTPase, Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases). Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions.	3.65389e-13
NC_009523.1|WP_011954987.1|238833_239115_+|4a-hydroxytetrahydrobiopterin-dehydratase	gnl|CDD|376528	pfam01329, Pterin_4a, Pterin 4 alpha carbinolamine dehydratase. Pterin 4 alpha carbinolamine dehydratase is also known as DCoH (dimerization cofactor of hepatocyte nuclear factor 1-alpha).	1.23914e-41
NC_009523.1|WP_011955005.1|255135_255447_-|YggT-family-protein	gnl|CDD|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	0.000158271
NC_009523.1|WP_011954989.1|239784_240537_+|chromosome-segregation-and-condensation-protein-ScpA	gnl|CDD|234635	PRK00104, scpA, segregation and condensation protein A; Reviewed.	3.25242e-40
NC_009523.1|WP_011954999.1|247811_249875_+|response-regulator	gnl|CDD|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	2.16465e-73
NC_009523.1|WP_011954996.1|245578_246385_+|DUF4388-domain-containing-protein	gnl|CDD|373017	pfam14332, DUF4388, Domain of unknown function (DUF4388). This domain family is found in bacteria, and is typically between 102 and 135 amino acids in length.	1.93541e-25
NC_009523.1|WP_157040914.1|253003_254275_+|sensor-histidine-kinase	gnl|CDD|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	1.14526e-28
NC_009523.1|WP_011954990.1|240564_241296_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.56183e-85
NC_009523.1|WP_011955001.1|250855_252373_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl|CDD|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NC_009523.1|WP_011955002.1|252380_253007_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	gnl|CDD|235067	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE.	3.39373e-119

Protein sequences

>NC_009523.1|WP_011954996.1|245578_246385_+|DUF4388-domain-containing-protein
MALAGDLSEFSLTDIIQLIELSNKSGAVHLQGKRGTQEIDGWLYFRDGRIIGARLGSLPPLEAAYTFFTLTSGPFRFHEDVLLDKPTITQSNNMIIMEGIMRQEALAHAPEPVLSSTTILRLVPNPASTGSEISLEADEWRVLTMVNGKNTVGYIAQRSGLGEARTCEILNRLLESGLVEKRDSNLTDSLFPELERIVLEALGPAARALLVEAYVRAGIHDQDTATPEQVTTALSLFEASAMRSFGEARVREPVAQMRSFTQQVFRTM
>NC_009523.1|WP_011954995.1|244945_245521_+|GTPase-domain-containing-protein
MALINVAAREIHCKIVYYGPGMSGKTSNLQYIHSQVPKEAKGELLSIATETERTLFFDFLPLDLGKVRGFQTRFHLYTVPGQVLYERTRVAVLSGADGVVFVADSQKHKLEENIRSLRELAVNITRQNKRFQDFPVVLQYNKRDVPGALPVATLDKYLNTLGWQRFEATATNGAGVFDTLKAISKLVISKL
>NC_009523.1|WP_041331273.1|244388_244883_+|roadblock/LC7-domain-containing-protein
MDPQLTSQIVPAEEIKVIEECLVRLAEDTGGNYVLLLDKSGQVITAQGDAARQDITALGALIAGTFASSREVAKLLREKDFRQLFTQGVRENIFISLIEDQWILCIIFNKGTHIGLVKVLTKKATDDLSVVLERVREQQKARDDVLGSSFRTSMEDTIDLLFRD
>NC_009523.1|WP_011954993.1|243870_244158_+|hypothetical-protein
MRLDLSSKRARKLIREHDLSEEEILQIVASARINLATFDPEYRTNVTQIAEDLRKSRPTIYGWADRALAATIQSLRNIRTGRPPKERERNAENDA
>NC_009523.1|WP_011954992.1|243105_243549_+|Hsp20/alpha-crystallin-family-protein
MTNLTRWDPFQEMMTLREAMNQLFEESFVRPDLARGSFVPALDLSETEDAYLVEAAVPGLKPEDLEVTVENSVLTIKGEIKQESQETKRNYHRIERRYGAFQRQVALPRSVKADAIKATLSNGVLRLEIPKAEEVKPRRILINPTTN
>NC_009523.1|WP_011954991.1|241309_242980_-|PAS-domain-S-box-protein
MLDRYDQRLRQLESLLRISRAITAHLDLTSVLNLVIEVAVDLLAGNSGLIALRDDDGVTRIYAASGLARETWPAFTDLLATPIDDQPTLVRRLREVGADIGLPLRHVSALPLVFRGATVGVIYVFRAALNVEFTAEEHQLLTAFADQAAIAVSNARLFQSVLREKQHLDALIENSADGVMILDSRWRITTFNRAMEQLTGWSREEAIGRPCAEVLAIHTPQGANLCLTDCPLQRQPFEPNPVAEGWITTRDGRRLYIQSRYAAQRTPQGAFLGAIANVRDVTEQKIEAEMQNTFISVISHELRTPVSIIKGYAETLARQDAAWDAATLREGLMVIIEEADRLAQQINTLLEASRLQTDGMRLELSDWPVRPLVERVVERFMPQAGERFTFEIDIPDDLPPVHADYERTRTVLENLVSNAIKYSPNGGLVRIAARVSGDYAIISVSDQGIGIPFEEQKKLFRRFYRVDNRLRRETQGAGLGLFLSRVIVEAQGGRIWVDSRPGRGSRFSFTVPLATPMLSDRTAAPEAPSTSSEGTSEPPAMLPPYTEPPLLEDHEQ
>NC_009523.1|WP_011954990.1|240564_241296_-|response-regulator-transcription-factor
MSELKDKLILVVDDEPRMVNFMRMNLELEGCRVISASNGREALEKVRDEMPDVVLLDIMMPVMDGFETLRRLRQASSVPVLVLTAKDDEEDRIKGLELGADDYIGKPFSHRELVSRIRAVLRRHYTPPPAPQTLVKVDDRLQIDFARREVLVNGERVNLRPTEYRLLYHLVQNAGYVMTHEQLLSKVWGPEYRDETHYLRLYVTYLRQKIEEDPANPKYILTERGIGYRFVDFKRDHDGRSEG
>NC_009523.1|WP_011954989.1|239784_240537_+|chromosome-segregation-and-condensation-protein-ScpA
MFVDHLDYTITLPVFEGPLELLLRLIEREELDITSVALAHVAEQYLAHVRSMEAPDPASLSAFLVVAARLLLLKSRALLPQPPATDDAAPDDDDDALVRQLQDYQRFRRLAALLRLYEGRRMYLRLAPPPAPRAASLDHTVADLIAAIQRRMQLMLPLDPPPVALPAPKIVTVGDMVERIRALLSERSWIAFEEITSLTARRIEIIVAFWAVLEMWKRRAVTVEQTGLFGAIVIRHGPGFVAGWELEVEG
>NC_009523.1|WP_011954988.1|239266_239779_+|hypothetical-protein
MAQRRWRYRVRQFVTALIASIRLDERVLLVCTLSDPQLLLFERMPRFAQRHSLDVYHALVRAGHTDPHLLQAALLHDCGKVDPNGRTIPLIYYAIIVLLQQYAPDLYQRAARNGRGLLYPFALHATHEQRSVIYARAAGSHPEVVQILSDYAERRATPFTDALRAADDTN
>NC_009523.1|WP_011954987.1|238833_239115_+|4a-hydroxytetrahydrobiopterin-dehydratase
MATRLSDAEIEERLGDLTGWTRQGNEIRKTFQLPSFPSAIAFVVNVAFLAEAAGHHPDIDIRWRKVTLSLTTHDAGGLTQKDFDLATQIDEIM
>NC_009523.1|WP_011954998.1|247403_247661_+|hypothetical-protein
MMALILVIPCAVWMALELGDAETRNWLAQTGYLFFGAVAIVLAFRIVRAAHVPARIRRSWLFFGAAFLASGLGNAIWLIYTKALH
>NC_009523.1|WP_011954999.1|247811_249875_+|response-regulator
MLIWFFSVVPRAGAGLDDPWLTALLLAYPVGDLIVLFGVVHIALKSDNWRSALPMHMFSLGLLAFLAGDLGYSSMMMSETYQEGMWPSSLWIVAYTIFAVAAQLQLTSQAAPARQSATDGATTASLNLLPYLGIVVGFGLLLAVTIQNWTRPLGDLIIGALALTVIVMVRQVVAMRENVRLATERAAAEHASQIKSEFLANMSHELRTPLNSIINFTRIISTGARGPVTPEQIDYLNRVRQSGEHLLGLINDILDLSKIEAGRMELFRESFQIGDLIQSVLATASGLVKEKPIELRSEIAPHLPPVYADRTRVRQVLLNLLSNAAKFTDAGTITVHAEGCNGEIVIHVSDTGIGIAPEHLEKIFEAFRQLDNASNRRYEGTGLGLAICRRLVDLHGGRLWVESAVGVGSTFSFSLPLTAATQSASSPESSQTYEPSGAIPIIVIDDDPAAIEIVRTYLSCDGYSVVAVTDSRHAIAEVRRIKPAAIILDVLMPHRDGWEILADLKADSELQAIPVALYTIVEQQRLGFHLGASAYLIKPIDEMQLRATVAHLVQKNASIVVIDDDRNQLEIIATCLNRAGAYQVHTANSGAQGWAEIVRRRPDLIILDLMMPEIDGFTILKRLETDPHTRHIPVVVLSAKDLTIQERAYLAQRVKALLAKGDTSPEHLLNRVMELLNARNAMDVSAN
>NC_009523.1|WP_011955000.1|249915_250326_+|response-regulator
MMIRPEDAYVLVIEDDANNLMITVDLLRMMGIRYVNARASGRQALKLIETVTRVDLVLLDIQLPYEDGYQVSRQLRAHPKLRAARIAAVTANVLPQDEARARAAGFDGFIGKPIDFDRFPQQIRLLLEGAEVWQPR
>NC_009523.1|WP_011955001.1|250855_252373_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MRALLSVSDKRGIEAFAAGLVELGYEIVSTGNTARTLAAAGIPVRPVSDVTGFPEILGGRVKTLHPAIHAGILARRDDPGHMAALDVHGIAPIDIVAVNLYPFSETIARPDVSFAEAIEQIDIGGPALVRAAAKNHDSVLVVVSPDDYDPVLTALRSEAVTPNLRRRLAARAFAHTAAYDAAIAAYLSDEPFPETLPLAFRKAQDLRYGENPHQRAALYGEFHTFFEQLHGRELSYINILDIAAVQGLIEEFDPQEGAALAIVKHTNPCGVGIGATPLEAWEKAFATDREAPFGGIIAVNQTLDLPLAQAIDEIFSEIVIAPAFADDALALLRKKKNRRLMRALRPVRLARGLAYHSVPGGILAQEPDLAPLDEEPFQVVTQRAPTETERAALRFAWRVVKHVKSNAIVFAAADRTLGIGAGQMSRVDSTRVAVWKAQNAGLSLAGSVIASDALFPFPDSVEIAAAAGATAVIQPGGSVRDDEVIAAANRLGMAMVFTGRRHFLH
>NC_009523.1|WP_011955002.1|252380_253007_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE
MTGNGIKFDASGLIPAIVQHARSGEVLMLGYMNEEALQQTLVSGMVTFWSRSRQALWRKGETSGNVLRLIEIRQDCDGDALLVLAEPAGPTCHTGRVSCFHRTLDGDVTPVRMPQSVILTDLANVIAQRASAPKEGSYTTKMLAGGVDRIGKKIGEEAAEVIIAAKNGAPDEVAWEIADLMYHTLVLLQQQGMAIEAVWHELRRRHGG
>NC_009523.1|WP_157040914.1|253003_254275_+|sensor-histidine-kinase
MNVTQDVQGIAVVHVNGNENGKEASLPTRTDYLGWIARAGLALTRCRTATDALDAMAAQLDAAPFLLRGYVILAEAETLRLSRVVSFGRAPTLPAALPLAGSLAGAAIAEKRLVVAPPAASSTAAWERTLASESTLVCAPFHGVASRGVIVAALADGAGKDEEYGACLQSAAMLMCSTLDRIGECETQLRQRMRQIDEAHTGRLALIGRLTAALAHEINNPLQAIANTLYLLQHRPLSDEKRQRYLGMAQQETERVIASVRRMLDLYRSSGQGKRPVALHRILDQAIQQASDVLRERGIVVRCLYAPDDLRVSGFAGHLRFACYNLILNSAYAMPRGGTLTIRTCWQDDDTAPSVVVEFADTGTLVDEADLPRLFDPDGPVRGEANGIELPLSYSIIEQHHGTLTVQCTDDQVIFRVCLPAAT
>NC_009523.1|WP_011955004.1|254294_254600_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MDPLQLLILLVIAGICGAVAELIVGFSPPGLHVMLVSIIIGVIGAFIGAWIASVLNLPPITEIRVGTIRLNLLYTIIGSTLLLVLLQALRSGRRWLWINRK
>NC_009523.1|WP_157040915.1|254799_254937_-|hypothetical-protein
MTVSSVGMTNLVRQGVSARRLATEVAAGRREARLRGREGAHPARP
>NC_009523.1|WP_011955005.1|255135_255447_-|YggT-family-protein
MFSFIPYILKYRYLTAATVVIGIVEGVLIARFVLRLFAARPDNPVVQAVYGITQPLIAPLRVLDAGQPQYGASLEFATLTLLLVLPLITALMWRLTQKNPSDS
>NC_009523.1|WP_011955006.1|255566_256001_+|hypothetical-protein
MYSPSVTVSDASAASAPARGVRFFWGLFIVNALLFGSLLVALLLMSHQPASSLSPLEAETLRAAVLTRLDGTVDDPLVEAAPGVFVRASNPGGLRLNGIVYYYYIEGERNFDPLSRGMVDHADIDIVLRDMSGPQPLVVYRLRH

Crispr_ID: NC_009523_3

• CRISPR_ID: NC_009523_3
• CRISPR_location: 328365-328494
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009523_3

Consensus_repeat	Method
GCAGCGGCGGCGGCGGGGCGCAGC	CRISPRCasFinder

spacers of NC_009523_3

>3.1|328389|31|NC_009523|CRISPRCasFinder
GTAGGGGCGCAGCACTGCTGCGACCAGACGG
>3.2|328444|27|NC_009523|CRISPRCasFinder
AGCGGCGCTGCACCCGTACAGGGAGGC

CRISPR arrays and Neighbor proteins around NC_009523_3

CRISPR arrays

The CRISPR arrays of NC_009523_3

>merge|NC_009523|3|328365-328494|CRISPRCasFinder
GTAGGGGCGGTGGCGGGGGGCGCAGTAGGGGCGCAGCACTGCTGCGACCAGACGGGCAGCAGCGGCGGCGGCGGGGCGCAGCGGCGCTGCACCCGTACAGGGAGGCGGGGCAGCGGCGGCGGGGGGCGCA

>NC_009523|3|3|328365-328494|CRISPRCasFinder
GTAGGGGCGGTGGCGGGGGGCGCA	GTAGGGGCGCAGCACTGCTGCGACCAGACGG
GCAGCAGCGGCGGCGGCGGGGCGC	AGCGGCGCTGCACCCGTACAGGGAGGC
GGGGCAGCGGCGGCGGGGGGCGCA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955050.1|326307_326673_-|conjugal-transfer-protein-TraR	unknown	unknown	gnl|CDD|274340
NC_009523.1|WP_041334585.1|333025_333532_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011955062.1|340032_341277_+|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|182528
NC_009523.1|WP_011955060.1|337361_339122_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NC_009523.1|WP_011955052.1|327629_327959_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NC_009523.1|WP_011955056.1|331593_332913_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NC_009523.1|WP_011955044.1|319196_319868_+|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319787
NC_009523.1|WP_011955059.1|336649_337273_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_009523.1|WP_011955046.1|321397_323173_-|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009523.1|WP_011955055.1|330924_331353_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955048.1|324479_325430_-|RluA-family-pseudouridine-synthase	unknown	unknown	gnl|CDD|223638
NC_009523.1|WP_085979440.1|339228_340026_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NC_009523.1|WP_011955063.1|341346_343359_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|312032
NC_009523.1|WP_011955049.1|325466_326060_-|signal-peptidase-II	unknown	unknown	gnl|CDD|173251
NC_009523.1|WP_011955045.1|320507_321401_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl|CDD|234708
NC_009523.1|WP_011955047.1|323442_324372_-|malate-dehydrogenase	unknown	unknown	gnl|CDD|180477
NC_009523.1|WP_011955054.1|328628_329420_+|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009523.1|WP_041334582.1|317899_319141_+|transcriptional-regulator	unknown	unknown	gnl|CDD|224235
NC_009523.1|WP_011955051.1|326825_327473_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955058.1|333805_335344_+|aldehyde-dehydrogenase	unknown	unknown	gnl|CDD|365919

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955050.1|326307_326673_-|conjugal-transfer-protein-TraR	gnl|CDD|274340	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family. Members of this predicted regulatory protein are found only in endospore-forming members of the Firmicutes group of bacteria, and in nearly every such species; Clostridium perfringens seems to be an exception. The member from Bacillus subtilis, the model system for the study of the sporulation program, has been designated both yteA and yzwB. Some (but not all) members of this family show a strong sequence match to Pfam family pfam01258 the C4-type zinc finger protein, DksA/TraR family, but only one of the four key Cys residues is conserved. All members of this protein family share an additional C-terminal domain. Smaller proteins from the proteobacteria with just the N-terminal domain, including DksA and DksA2 are RNA polymerase-binding regulatory proteins even if the Zn-binding site is not conserved. [Unknown function, General].	6.9e-26
NC_009523.1|WP_041334585.1|333025_333532_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.72166e-15
NC_009523.1|WP_011955060.1|337361_339122_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.03828e-38
NC_009523.1|WP_011955052.1|327629_327959_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.43441e-09
NC_009523.1|WP_011955056.1|331593_332913_-|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.29164e-45
NC_009523.1|WP_011955044.1|319196_319868_+|HAD-IA-family-hydrolase	gnl|CDD|319787	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase. L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation of L-2-haloacids to produce the corresponding D-2-hydroxyacids with an inversion of the C2-configuration. 2-haloacid dehalogenases are of interest for their potential to degrade recalcitrant halogenated environmental pollutants and their use in the synthesis of industrial chemicals. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.06876e-49
NC_009523.1|WP_011955059.1|336649_337273_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.19595e-16
NC_009523.1|WP_011955046.1|321397_323173_-|GAF-domain-containing-sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.41717e-49
NC_009523.1|WP_011955062.1|340032_341277_+|FtsX-like-permease-family-protein	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	1.57578e-60
NC_009523.1|WP_011955048.1|324479_325430_-|RluA-family-pseudouridine-synthase	gnl|CDD|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	2.8169e-112
NC_009523.1|WP_085979440.1|339228_340026_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.10119e-119
NC_009523.1|WP_011955063.1|341346_343359_-|alpha/beta-fold-hydrolase	gnl|CDD|312032	pfam08386, Abhydrolase_4, TAP-like protein. This is a family of putative bacterial peptidases and hydrolases that bear similarity to a tripeptidyl aminopeptidase isolated from Streptomyces lividans. A member of this family is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterized from Propionibacterium freudenreichii.	3.31106e-11
NC_009523.1|WP_011955049.1|325466_326060_-|signal-peptidase-II	gnl|CDD|173251	PRK14790, PRK14790, lipoprotein signal peptidase; Provisional.	1.47873e-97
NC_009523.1|WP_011955045.1|320507_321401_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl|CDD|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	4.98501e-105
NC_009523.1|WP_011955047.1|323442_324372_-|malate-dehydrogenase	gnl|CDD|180477	PRK06223, PRK06223, malate dehydrogenase; Reviewed.	0
NC_009523.1|WP_011955054.1|328628_329420_+|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	1.52387e-112
NC_009523.1|WP_041334582.1|317899_319141_+|transcriptional-regulator	gnl|CDD|224235	COG1316, LytR, Transcriptional regulator [Transcription].	2.8074e-44
NC_009523.1|WP_011955058.1|333805_335344_+|aldehyde-dehydrogenase	gnl|CDD|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	0

Protein sequences

>NC_009523.1|WP_011955052.1|327629_327959_+|helix-turn-helix-transcriptional-regulator
MSNEQNKRRRKAAYIWKPEMIRALREHMDLTQRELADLLEVRQQTISEWETGLHTPHRSTQKTLSMVAERAGFSYNAQESVPADEDGAQQNGDETAERANADRQTAGDA
>NC_009523.1|WP_011955051.1|326825_327473_-|hypothetical-protein
MALTRGGTSLISYEELAVGLEEAWLLAGLHEHAIVESIQPGTLDRVYRAELFPEHPEPIGEGWSPPWVELNLVWTAAHQLFSEGRDITPGPLELAWTYTVDVRSFDRSDVELLRAFNGAVRAALRRVMPDFPPPADYIAVEIRRGYRIDDKPSLVYLQIVGTNVTDLSDLWGERSPEALRAVLRDELRIVATLLHSLGETFTPGGVGGYRSVDTA
>NC_009523.1|WP_011955050.1|326307_326673_-|conjugal-transfer-protein-TraR
MPSTTIFAAQRERLEAERDALLAEIAALERERASREESAGIGNVVAEEMMETLVRERDLALRSNARELLEQVNAALRRLDEGTYGICADCGEPIPIERLEALPYATLCVRCQSTRERARRW
>NC_009523.1|WP_011955049.1|325466_326060_-|signal-peptidase-II
MARTGSTIGRELRRYWLGPAAIAATILALDQVTKAWVLETLGTVEGTTRPLLGDWLSLTLIHNTGIAFGMFDVGFPHFFTVTSIIISLGAMYFYRYHLPGPHLLPQVCLGLIVGGAIGNIIDRLRFGYVIDFIHVHWFPGIFNVADSSITVGVAILALFLALIGDGEQRRAAADDALLNDLLSREPHGSGSSVRSDG
>NC_009523.1|WP_011955048.1|324479_325430_-|RluA-family-pseudouridine-synthase
MSAEVLHLVVEAANEGDRLDRYVADHVPDLSRTYAQRLIEAAQVLLNNRQARPSTPVHAGDTVTVHLPAPQPVGLVAEPLPLQIVYEDRDVVVIDKPASMVVHPAPGHDRGTLVNALIARYPEMAINGDMRPGIVHRLDRDTSGLLVAARNERALRSLQAQQQARTMLKIYLAVVEGRMPELEGVIDAPIARHPTDRVRMAVVAGGRPARTHWRVLEDLGEYTLIEARLETGRTHQIRVHCASRNRPILGDPLYGPKRPRATFGLTRQFLHAHRLGFKLPSGGEWVEFTSPLPADLEAALARLRQSARAAVRRVSS
>NC_009523.1|WP_011955047.1|323442_324372_-|malate-dehydrogenase
MRPKISIIGAGFVGSTAAHWIASKELGDVVLVDIIEGVPQGKGLDLLQAGPIEGFDVKITGTNDYSATAGSDIIVVTSGAPRKPGMSREDLIRVNADITRDCISKAAPLSPNAIIIMVNNPLDTMTYLAKQVSGFPKNRVVGQAGVLDTARYRTFIAMEAGVSVEDIQAMLMGGHGDEMVPLPRFTTISGIPVTEFISKERLDAIVDRTRKGGGEIVNLLKTGSAYYAPSAATVQMVEAILRDKKRVLPCSCYLEGEYGLNDIYFGVPCVLGAGGVERVLELPLNDEEMALVKKSAEAVSSSIAALKAM
>NC_009523.1|WP_011955046.1|321397_323173_-|GAF-domain-containing-sensor-histidine-kinase
MDAAEHIPFSSKISLQRQMLGGDRFYNLSRWGVTALLIGIVRLISGEPLWPPSAAQSPMIVVMWGYVLFTALMTILVFIPSVASLLRFSFALDILTLLLLTLFNPDPREVLYPLFLLPLVNAAFRLNSSASLLTGLITAFAYIGAYLIARIGPGNGSIPGDPLGYVGLALRALALVFIPWITGGLAERWSASNRLSVALAEEKAAQALREANAYRDQTRALYEAAYTLATTNDYQNVLEVALDESQKLAPYTCGIVLLSTGQPNQLFVAASRGLDADDRERSITVAGGALGQALRESNPLTFDDIQHDPELMLFTSLQRCHTACLIPLRFGLNIYGTMVFARERDGAFTDEEVEKLAALASYALVALQNAQLIYDLQQERTKLLSKEEEVRHQLARDLHDGPAQALAAITMNVEFIKRLLDRDPQRVLPELDKLGQLAKRTTHEVRTMLFELRPLALETQGLDVTLQQYFERFRDNPTKIILEADKIDAHLDTKVEGTLFNIIQEAVNNALKHAKAQHIRVRLIQTPTTLETIIEDDGRGFDVEKVRASYDQRGSFGLLNIEERASLMGGVAEVTSTPGKGTRWKVIVPLR
>NC_009523.1|WP_011955045.1|320507_321401_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MTVSNPYLSRARVRAALHALGLRPSRSMGQNFLIDGAALATIVTAAALTADDTVVEVGPGLGVLTWELVQRARTVVAVELDRRLAERLRTEFRTFPNLAIIQGDVLRLPPATILAEHDPDAASGARPYKVVANLPYAITSAALRHFLSTPLRPTLMVVLVQQEVAARICARAGDLSVLAHAVQIYAEPEIVARVPASSFFPAPEVDSSVLRLRIHPQPAVVSDQPEALLRLIKAGFLHPRKQLGNALPGGMAAMGMKIDRQRVLDALAAAGIDPTRRAETVTLEEWGAVYRALHHIW
>NC_009523.1|WP_011955044.1|319196_319868_+|HAD-IA-family-hydrolase
MTREYDVITFDCYGTLIDWDRGIQEGFAAAARRVGVEVDLNAALTAYHAIEPQVQSAEYRPYRQVLAETAQRAAATLGWPMDDDTARFFASRLPEWPPFADTNPALERLYAAGYRLGILSNVDDDLLEATIRHFTAPIDLIVTAQQVGSYKPATGHFIAARERIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPPDGPAPLVDVPDLLAFAAWLEG
>NC_009523.1|WP_041334582.1|317899_319141_+|transcriptional-regulator
MLAGVVLLALLIALAYWQFAAAVAPLIVADSRPFPPLNPPGTGVNILLIGVDERPDHPEEGVRSDTLIVVHLDTIGRRVSLLSIPRDTRVELRDIGPAKINVAYGYGYAAAGKLYGEGVTPAQGGMALTAETVGQFLDLPIHYTAQINFDGFARVIDALGGVTIDVPRRIVDDAYPTPDFGTVRVEFEPGPQRMDGARALIYARTRHADSDFERAGRQQQVIRAVVDELRARGPLGAALLVPALGRALDGAFTTTLPLSRLDMILGIGWITTGLDPAAIGQYRLAPDTAPNFREIGSDILWDPAEVRAVVRDFLAAPGVETEQARIQVLNGAGVAGLARRVSGELEAAGFTVVPAADAPRSDMPDTIVYDVTGKPATARRLATLLHAGIRRGVPDGVNPTVDIIVVLGRDQVK
>NC_009523.1|WP_011955054.1|328628_329420_+|DUF4058-family-protein
MPGPFPGMDPYLERRDLWPDVHQRLITYSADTLQPQIRPRYHARIGERLYVIPPHRSIYPDVTVTQRQPATTAEGRGVAALMADAPMVIAVAPEEVREPFIEILDLAHGGRVVTVIEVLSPANKTPGEGHEAYRRKQEETLASDTHLVEIDLLRQGVPTVAIPPHYLTPYQPWHSVICVSRAGRRERFEVYVRTIRQRLPRIAIPLHPPDPDAVLDLQAVLERCYEHGAYSDLIDYRLDPEVALPADDVAWVDDHLRQQGLRP
>NC_009523.1|WP_011955055.1|330924_331353_-|hypothetical-protein
MSTIAQTRLSNATLLRAGGAGVLAAVAANVVVRLILGAVVPLSPDFMPFTLGPIIAFTLLFTLIGVAVLAIVNRVAANPLRTYNIIGVIAFFVSLIPNLAGAANPSSMPMGGTGSDYLVLIIFHIVAAVAFLGVLNILARRV
>NC_009523.1|WP_011955056.1|331593_332913_-|extracellular-solute-binding-protein
MKHRLSLRSALCLLTLSPLLAACGWFAPPTPTPTPEPRVLRVYTVRDPTIEGVVEIISQGFRTRHPDVTIEFIYGDGSYSELQGSAATGNIPDVVWAPDVITPALIEAELLLDLEEFARGDGSVNLEDVHPVALEPGRSRVRPGLYLIPASLETIQMYYNSSLWERSGAPLPRDDWTWDDLIAACKRVQESTPGVDCLSFTNSGLFDHTAWVYWLPWVRGAGGDALSADGAQSTLSAPQSLEGLQGYLDLWIRHKIAAQPGASQDDCFVAQTCAAFFSFAGAARIYREQIGDRFAWDVQIVPAHRAGRFTGIGSYGFAVTRASREPQLAWDFVKYIITPEAQRAIAAAYLGTPALLSLSNDPAVVQLPPPLANMRAFVVGREAGITPPRYPTACGSVYNGPVSAAIADALNAALRETVSVEGAFTIADRKIQTCLDANR
>NC_009523.1|WP_041334585.1|333025_333532_+|Uma2-family-endonuclease
MEELILQTDASGAPVRLEYVRGHTRWEASPSSRHQKMLQRIERSVRPSFDGETGCSCSTLVDVLIRFPDPDGSFKRPDLSIFCTEPPDSDEALEVLPVAVVEILSPGYEDKDLGLDGAPFYLAHGVVDVVVVDPRTGVVFHFQRDRSPVTLQAPVTLDLTCGCSLDVP
>NC_009523.1|WP_011955058.1|333805_335344_+|aldehyde-dehydrogenase
MDDHINEDLPCYGLYIDGSWVDAEGGTMPVNEPALGRPMARVARGSAADVDRAVAAAREAFDRGPWPHTPGHERARVLNAIADLIEEHTAEFAELETRNLGAPLRKTTFVDIPWSVEHLRVFAELATIHPYEPLPWTDVPSVSWNFVWREPIGVCGQIVPWNYPLLMTIWKIAPALAAGNTIVLKPASYTPLTALRLTQLIHEAGLLPRGVLNVVTGPGAEVGDALARHPGVDKVSFTGSTETGRHIMRLASDTIKRLTLELGGKSPSLVMPDADLELATDGVLFGVFFNGGQSCEAGTRCLVPESLHDEFLERLVTRARSLRIGDPLDLETDLGPLVSEAQCRIVEEYIEVGKNEGARLVTGGRRVRVPGFERGPFVEPTIFTNVLNGTRLAQEEIFGPVLSVIPYRTVTEAIELANASRYGLGAAVWSRDLQGAIEVAKRIRTGTVWINDHHIILPRAPFGGYKQSGIGREHGIYGLMAYTELKHIHVDLMQKRTGRVWWDVLIPQSESE
>NC_009523.1|WP_011955059.1|336649_337273_+|TetR/AcrR-family-transcriptional-regulator
MQDINNEPTYGPTAARILMTATRLFMQRGYSAVSINDIVQAADVTKPTLYYHFSDKEELFVLVAIHMLADMHGTMRRVIAEQSDTRGRLIALAKVLLNEPNGDTRMMRHQAREHLSPERQRRLADAFRRYMVEPLRQVMQQGLDNGELTRHSAYDLAMLFLGLMEGFQRQMAPPVAPEHGEMYQAISTDRFSAETLVDLFLYGTAVR
>NC_009523.1|WP_011955060.1|337361_339122_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MTSVPQTQRKLRLPRLPVPVIIAAVLIIAVMVTLAVPRLTGSADPLQGGTPITVTRETLIAGINATGRIEPRQEAALSFTIPGRVAEVLVAEGDRVAAGTPLIRLDNREAMAQVASARAALAQAEADLKQLQEGATPEEIAQARAQVEAARGALVQISGSVTEADIAAARARVDEARARLNALQGAPNNDQLTAARSALTEAQAALERQRSALSAAKLDAERQVFERANRLRDAQTAFAAARDNLARVEADGKDPLTGAPLSDAGKRTYADAFAQAERALADAELALNQARIAYETARQNEITGLAEAEARVATAQANLDALLNPNPDRIAAARAALAQAEADLARLLGEQRQGALAAQRANLAAAEANLARLTADPRATDLARAQARVAQAQAQLDLAQIRLDDTTLTAPFDGVVARINVAPGEQVAQGPVLTLIDVSRFKVTVTVDEVDVVRVAPGQDVEVLIDALGPPPQIGRVQRIAPQATNERNVTAYEVELEVAPGDRPLRSGMTASATIITAKRENALSVPVQAVREENGMTVVDVVVNNNGRTTLVTQPVETGIRTGDRIEIINGLNEGQQVLLPGAQ
>NC_009523.1|WP_085979440.1|339228_340026_+|ABC-transporter-ATP-binding-protein
MIDYVTEPVVRVEHVTKEFVTGGSRFRALDDVSLEIHRGEMVAIMGPSGSGKSTLMTILGLLDVPTSGSYWLDGQDVSKLDRVQQARVRNQKLGFVFQNFNLLPRLTALKNVELPLVYGRVGAREREERARRALEAVGLETKLHNRPNELSGGQKQRVAIARALVGNPAMVLADEPTGALDTRTGAEIMALFRELNREQGITIVIVTHDPEIGKQMDRVIGLRDGRIADNILQEYYHVNLAPEELELPVREMAPVPVTVLKPEQE
>NC_009523.1|WP_011955062.1|340032_341277_+|FtsX-like-permease-family-protein
MFKELALMAIDSLRANKFRSLLTMLGIIIGSATLVAVLSLGNALQSQVFERFVDLGTRRIAVLPGDPQARGARDVPGYGLLSIQDYRALEQLVARHPDVFRTIVPEVSLRVQARFGGSSANPTVVGTTKEYQFVQTVPVQYGRFLTDDDDRQAARVAVLGALVAEDLFGKENVKNAVGRTIEVNGQPLQVVGVLRQLGGPFSSDQRILVPVSTARLRIAGSQDLPGRGLQMSSILLSLQSEKEVARGEALVRATLRATRNVPEGAIDDFRLNLPTQALGVLAGINGAITGFIALVAGISLVVGGIGIMNIMLVAVTERTREIGVRKALGATDGDVLSQFVLEAVAISVVGSLLGVGGAIGLVVLVGVAAGLSVSISWIAVALALIFACAIGVGFGYYPARRAALLLPIEALRYE
>NC_009523.1|WP_011955063.1|341346_343359_-|alpha/beta-fold-hydrolase
MRMRFILLILALLVSACAVPSSSNPTPTLAPGAEELLGAPTATSVPPTAAPASTAAPAPSPARSAARYETAPCEFPVPAGVSVECGWLTVPENRAKPDNGREVRLHVAIFRSTRPNPPPDPIVYLEGGPGVDALERLPLVFDLWFRPFLANRDFILYDQRGTGYSTPSLACPELTKLSFDMLPMDIRAGESSRLWKEAALKCHARLVAEGIDLKQYNTLTNAADLEDLRLALGYEQWNLLGSSYGTRLALTAMREYPQGIRSVVLDSTRPLQINESQTPADAERAFQTLFRGCAADPTCNAAYPDLERVFYDLVEQLNTKPVTLPGIDPFTGRTYDVLINGDTMISTLFQAMYSTEIIPLLPRAIYDAARKGEFDLWVRLIMNNVSQSDYFSYGVMYSARCYDEILFETREDMVRADEAFPHQQDVFDMASFWDICDAWGVGSAPPVENQPVRSAIPALVLAGAYDPATPPNDGRAAAATLQNSFFFEFPATGHGVVLDGGCPLSIAFAFLDNPQRKPDATCTTQLEGPAFDVEGAAVQLIPFRDSELGITGVWPQGWTNFGPGIYGRPSGDAAIVQILMPGSALETLVRLSSRFNLDREPEAAGEHVSERYTWQLYTTTIRGQPTDIALAEDGGRSLLVMLISDKGNRDELYDKVFIPSLDALRVIRTP

Crispr_ID: NC_009523_4

• CRISPR_ID: NC_009523_4
• CRISPR_location: 398287-398437
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009523_4

Consensus_repeat	Method
GAGTAGACCACGGATGGGCACGGAT	CRISPRCasFinder

spacers of NC_009523_4

>4.1|398312|20|NC_009523|CRISPRCasFinder
GTGACGGATCGGCACGGAAG
>4.2|398357|56|NC_009523|CRISPRCasFinder
TATAAATGAAACATCCGTGCCCATCCGCTTAATCCGTGGCAATCCGTGATTTTTAT

CRISPR arrays and Neighbor proteins around NC_009523_4

CRISPR arrays

The CRISPR arrays of NC_009523_4

>merge|NC_009523|4|398287-398437|CRISPRCasFinder
GAATAGAACACGGATGAGCACGGATGTGACGGATCGGCACGGAAGGAGTAGACCACGGATGGGCACGGATTATAAATGAAACATCCGTGCCCATCCGCTTAATCCGTGGCAATCCGTGATTTTTATGAATAGACCACGGATGGGCACGGAT

>NC_009523|4|4|398287-398437|CRISPRCasFinder
GAATAGAACACGGATGAGCACGGAT	GTGACGGATCGGCACGGAAG
GAGTAGACCACGGATGGGCACGGAT	TATAAATGAAACATCCGTGCCCATCCGCTTAATCCGTGGCAATCCGTGATTTTTAT
GAATAGACCACGGATGGGCACGGAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_083763352.1|391296_392181_+|DUF488-family-protein	unknown	unknown	gnl|CDD|377317
NC_009523.1|WP_157040921.1|399923_400106_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955108.1|406541_407693_+|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173847
NC_009523.1|WP_011955101.1|398856_399699_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955106.1|404743_405967_+|response-regulator	unknown	unknown	gnl|CDD|226654
NC_009523.1|WP_011955099.1|397317_397974_+|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NC_009523.1|WP_011955100.1|397970_398252_+|acylphosphatase	unknown	unknown	gnl|CDD|172920
NC_009523.1|WP_157041225.1|400227_400662_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955104.1|401457_403905_-|transglutaminase-domain-containing-protein	unknown	unknown	gnl|CDD|376628
NC_009523.1|WP_157040920.1|389325_389916_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955095.1|393097_394231_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955109.1|407986_409402_-|tyrosine-phenol-lyase	unknown	unknown	gnl|CDD|237313
NC_009523.1|WP_011955096.1|394230_395511_-|glycoside-hydrolase	unknown	unknown	gnl|CDD|119353
NC_009523.1|WP_011955094.1|392192_393020_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041227.1|405966_406545_+|uracil-DNA-glycosylase	unknown	unknown	gnl|CDD|381680
NC_009523.1|WP_011955098.1|396060_396654_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|131997
NC_009523.1|WP_011955105.1|403901_404675_-|TatD-family-hydrolase	unknown	unknown	gnl|CDD|238635
NC_009523.1|WP_041332728.1|389917_390763_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041332732.1|395557_395923_-|metallopeptidase-family-protein	unknown	unknown	gnl|CDD|240572
NC_009523.1|WP_011955103.1|400827_401310_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955108.1|406541_407693_+|acyl-CoA-dehydrogenase	gnl|CDD|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
NC_009523.1|WP_011955104.1|401457_403905_-|transglutaminase-domain-containing-protein	gnl|CDD|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	1.01288e-23
NC_009523.1|WP_011955106.1|404743_405967_+|response-regulator	gnl|CDD|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	2.03496e-48
NC_009523.1|WP_011955099.1|397317_397974_+|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	3.33124e-49
NC_009523.1|WP_011955100.1|397970_398252_+|acylphosphatase	gnl|CDD|172920	PRK14444, PRK14444, acylphosphatase; Provisional.	2.1095e-56
NC_009523.1|WP_083763352.1|391296_392181_+|DUF488-family-protein	gnl|CDD|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	1.65477e-33
NC_009523.1|WP_011955109.1|407986_409402_-|tyrosine-phenol-lyase	gnl|CDD|237313	PRK13237, PRK13237, tyrosine phenol-lyase; Provisional.	0
NC_009523.1|WP_011955096.1|394230_395511_-|glycoside-hydrolase	gnl|CDD|119353	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.	3.43252e-86
NC_009523.1|WP_157041227.1|405966_406545_+|uracil-DNA-glycosylase	gnl|CDD|381680	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins. Uracil DNA glycosylase family 4 includes Thermotoga maritima TTUDGA, a robust uracil DNA glycosylase that shares narrow substrate specificity and high catalytic efficiency with family 1, acting on double-stranded and single-stranded uracil-containing DNA. Members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. This family also includes the N-terminal domain of Bacillus phage SPO1 DNA polymerase. Bacteriophage SPO1 is one of a group of large, lytic, tailed bacteriophages of Bacillus subtilis, and contains hydroxymethyluracil (hmUra) in place of thymine in their DNA. It has been speculated that this UDG domain may help discriminate between hmUra containing SPO1 DNA and thymine-containing host DNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	5.05732e-49
NC_009523.1|WP_011955098.1|396060_396654_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|131997	TIGR02952, RNA_polymerase_sigma-70_factor_ECF_subfamily, RNA polymerase sigma-70 factor, TIGR02952 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is found in a limited number of Gram-positive bacterial lineages.	2.2072e-40
NC_009523.1|WP_011955105.1|403901_404675_-|TatD-family-hydrolase	gnl|CDD|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	7.04493e-117
NC_009523.1|WP_041332732.1|395557_395923_-|metallopeptidase-family-protein	gnl|CDD|240572	cd12952, MMP_ACEL2062, Minimal MMP-like domain found in Acidothermus cellulolyticus hypothetical protein ACEL2062 and similar protein. The subfamily includes an uncharacterized protein from Acidothermus cellulolyticus (ACEL2062) and its homologs from bacteria. Although its biological role remains unclear, ACEL2062 contains a minimal metalloprotease (MMP)-like domain consisting of 3-stranded mixed 2-beta sheets and a HExxHxxGxxD/S (x could be any amino acid) motif. It may belong to a superfamily of bacterial zinc metallo-peptidases, which is characterized by a conserved HExxHxxGxxD motif.	3.74188e-48

Protein sequences

>NC_009523.1|WP_011955100.1|397970_398252_+|acylphosphatase
MMDMARAHVFISGRVQGVNFRASARNYAREVGVSGWVRNLEDGRVEAVFEGERSAVQKMVSWCYSGPSHARVEAVDVRWEKPTGEERGFSIIW
>NC_009523.1|WP_011955099.1|397317_397974_+|phosphate-signaling-complex-protein-PhoU
MRDHYIKQLQSVHDDLLRMGSRVEHQLADAIKALDRLDIELAREIVARDREIDAARNAIDEHVFQLIATQQPVATDLRSLLAAIAIAGELERAADYAKGIAKKVERSLQTPSIIEAPMELHRLGTLVQTMLHTCLDAFVQLDVTLARSLGEKDQEIDALEDRVIETLKNAARQDPRKLDCALLLIDTAHVLERLADRTTNIAERVIFIATARAEEINT
>NC_009523.1|WP_011955098.1|396060_396654_-|sigma-70-family-RNA-polymerase-sigma-factor
MAVKSTPADNHYESEAHIIARAKAGDADAIGQLYERYAPQVHRYIASRLGDPVLAEDVCSDVFVRMLEGLERYEDRGWPFSAWLYRIAYARTMDMLRQARRRPSVPLDESAPQALEPPDEAVISRIAYHELQSVMRILTRDQRLVLRLRFDEDRSLAEIAESLGRTVGSVKALQHRGLARLAEALADHPAHQPIVAS
>NC_009523.1|WP_041332732.1|395557_395923_-|metallopeptidase-family-protein
MDRETFESIVIEALDSLPPEFARYLTNVEVRIEARPSREQRRALGLRPWQTIYGLYEGVPLTERTDGDPLIPDVITIFQAPLVRDFPSRDALREEVRRTVLHEIAHFFGISDERLHELDAY
>NC_009523.1|WP_011955096.1|394230_395511_-|glycoside-hydrolase
MRHVFSSPLFVSIYAVSLIVWALLVVDTVGLAVRATEPPVFPTPTLPPVTPVADTPTPAPAIIPSVQTERTVSPVSALPEEGAWFHPKTGRYIAAWLPNSFGSENRESFEANADILDEISPFWYSPSPAGTLRFGREARDRTLIELARSKNVLVIPTVHNVVTGDDPAPGILRNPRLRSYHVQQIVDEVLTYDYDGIDIDYEFISSSLRDEYSAFIIELADALHAHGKLLTVAVHAKDCDYCGLGGFQDWAVIGQVVDRLRIMTYDYHWRGGGPGPVAPVYWVERVARYAVTVVDPAKVIIGVPFYGYNWPRDGGGNARGQTWAMINDIIQTYRLSVNLMESNQNGLVQENWITYSSREEGRREVWFATSSGLDAKLRLVQELDLAGIAIWRLGGEDPRNWEVIRSRLLQDPYESQRVLSRLLPEH
>NC_009523.1|WP_011955095.1|393097_394231_-|hypothetical-protein
MVRTEIKANQREAAQLFVRGVAAARGGQRRLAAVLLARVVQLDPQHEMGWLWLSGVLDDPKEIAFCLRSVLAINPQNERARRGLAWLESRQLLRDGDADITAPFARAAPNVAEESVSNGSDGAVAAPSPSLWRTRLIGFLFPAREPSRDHTDSWWVGWRLSRQEMSRARVLLWSMPILLLALTLALNYALRTAVERNQALVQAELTQRAIAAGEEAAPTPEEPVVAVPALLETTLAEERNAATLAYLSRLEAPRARLRGAIESYRNATSRPGGSSIIHATSAQRLRDEIEQAYAVIAAVQPPDALAEAHALYLQGLELELTALDHMLAFYSSFRAEDANRAALAMAEAARRIDQARQAFDRQQAELSVETPLPHSAR
>NC_009523.1|WP_011955094.1|392192_393020_+|hypothetical-protein
MRMNVLITVKTYPTISVKYDELVCTAGFREDGSWIRIYPVPFRKKTYDERYKKYDWISVDLERNEQDFRPESYRPAPGSKIEVIRHIDTENNWEKRKHICLKNVYDDLDALIEEAKNPKICTSLATFKPKEILDFYAKPTEREWDMEKVMKIQADRRQLRLFPDEEEDLEKEFQIVKKLPYTFKYRFRDSNGKESNLMIEDWETGQLFWNCLQRHEGDEQRAIEDVRRKYFDDFAQTKDLYFFLGTTLQYHKRAPNPFIIVGTFYPKKDEQLRMF
>NC_009523.1|WP_083763352.1|391296_392181_+|DUF488-family-protein
MLYRRKVLLALIDIFGGAIDKLFLQKMLFLLSQRQEKPVYEFIPYNYGGYSFTAQWDINGLCARALLQEDEYTITLIEKQNSLNSLHPRDTWIIREILRKYRKKQRNELLRELYEQYPYYATRSKILEEVLDKEAQKRVEQYRYVEYRTVLFTIGYEGRSLENYLNALIRNGIRVLVDVRNNPVSRKPGFSKRQLERICRNVDIEYRHFPDVGIAPELRKGLKTQDDYNELFAAYRRKVLPATVSTQQEILNILQCYRRIALTCFEAESQRCHRHHLAEAISKLPGFAYEVEHL
>NC_009523.1|WP_041332728.1|389917_390763_+|hypothetical-protein
MVLKRETDLKFALVECKASSFGVATEQAIQARTFLLLADEPLAEALGLSPEQIQASILAYALPARESARLEATLSRLSNELRRHHLPAGDSTMIGLDIDSWDVRVVFDWSGSQFFSIAPGSHPVMRVQPGDDPRPLYFIPYDPDVHQSPEENLFCKRILFERIHSAVLAAVGRASLQTNLTLNINNLLNDATFGMFGLWENRESLKHMQRMCRQLITALSRAVNKEVSNSLIYEPPEDLKVVLSDPHQHHQVLAAIERFSCESMDLREPPMPDLFDDLFDA
>NC_009523.1|WP_157040920.1|389325_389916_+|hypothetical-protein
MYAISQLRFPSPVGKGGHDFYDNGRVTNRSESFRDHRSHLLFVVRIYEKLLKLTEQHAWYGIQESVDVPGGFRRLVGAPVTIHFQEPLTQEVFDHWIKATFERRRNKFRLWGHPIRLGPTKVHVYGVDRHLWQPLFLELTTQGLVAILPRGTCGNTVHRLVTNVQRYLDPGATAFIGDIHYTSMVEKSTEAAKSQA
>NC_009523.1|WP_011955101.1|398856_399699_+|hypothetical-protein
MSEATSQPNTYHAAAVGILDVPSASRQNLHRRPHLRMTGPLGGDFRLPIRVMREIPGSELLDHAHHGARLLIEGRLEWNKSSDAAGLLPTLIADAVRPVTPDDEEGCDVRLCGEVTAPARIRRHPLRPGIAMAHVTLRVQIPRTRAASRAVITETVGIPVVIPLNHPDAPALLRPGNRVLVEGLLEQAPLPRNGPEVDQTLADLDETAKQRATWAMTPEETRAAERDYTRRRWEATHTVIYRVVAGYVELLNGAPATIREARELRRAELQRRAQRQQSSS
>NC_009523.1|WP_157040921.1|399923_400106_+|hypothetical-protein
MARHAPDFLLVPLSVTGRFSRDASRVTRIRCAARRRTSLRRKSPPYAYRVVRRHDHHAAA
>NC_009523.1|WP_157041225.1|400227_400662_+|hypothetical-protein
MIHGVPVFPTAFPNRVVLGYADDTIRMAMNVPTDRVFFEVLCHGSRPNKNGKTYAVPFVTVPLRGEPIDAQKLFDIILACREYRLGQPVRLLMCWVGYGPDSLAQQLADLLGTVVLAANERINVKTLEPKDGGVWLTFTPRYWK
>NC_009523.1|WP_011955103.1|400827_401310_+|hypothetical-protein
MYFADLQPYTWFTSKRSGYTALAVGWLDSLFPYTIGPTPPAFQERLREHCACGVHAPMLGFHECDFCGKSHIFLEYGSKKVMTNNGEIWILDGNIVYAAPVMIHHYVTDHNYRPPQVFIDAVMRCPLPYEAAYQEIMQSWGETTFDYSRDYPFICSIRTP
>NC_009523.1|WP_011955104.1|401457_403905_-|transglutaminase-domain-containing-protein
MSFPVATVPNETPSRSWFARLEIGSLVIPFLLTVTITWSVTRSLEVANWADGLTMLTGIGLTALVTGMIFARVSWMPAWLAHPLASLPGLVFVIRQISPVIGAQAAAEFGSTKAQRLVTWGDYAAEVVLRALIWIRTLQAGGRGEDIVLFVVTLALIVWGVGYAAGWLTFRHQRAWIAVGLNASIMLINYTYAWPKPTGLFFLFFIAALLLIVYQHIVANQRLWRATRVEFPDFLPARMLLASFVTFILLAIVTAFLPNRPDNEHLARLWRTIRAPITALREGWQDAFSTINAPPGTTGAFLTRNARVGGPRQLGTALVMTVRSREYSYWRATAFDRYTGRMWQNAVGERARAALGVTTAEDARTPLAPGVVLEQPELRGRTLVTTTFELAQTRSDGLVMVGGALASTSLPVLMQHGYLDIDGELLPNFTETATVVAAAPLEASQTYTVATYLSTVDEQSLRESGTGYPEWVRMSYLQLPETVTPRVRELAATIVRNAGAVTPYDKALAIQEYLRTLPYNDQRPMPPEDRDWVDWFLFDAPGGYCDDFASAMVVLLRAGGVPARWVQGYAGGELDPDRRVYLVHENIAHSWPEVYFPGYGWQRFEPTPAPYASVPVRPAFPPADAAERPETTGGLGGALSDPEAMLREMIERNTGPAISDADALQREIEAQRMQERLRLAALIGGSLAFLTALIGAGALWLHWDVRGLSPAATAYARLTRLSGWAGVHAPPDATPYEYGALIGERIPRQKRTIDRIVSAFVAERYHPGHTANNQLPKEDWQALRRELVALLVGRIGAALRSPFRNTPPRRRQRAQ
>NC_009523.1|WP_011955105.1|403901_404675_-|TatD-family-hydrolase
MDATHFIDTHAHLGLAQFDADRGAVLARAAAAGVVRIVEIGYDLATSRAAVALAAQHEPIYAVVGVQPNHVAELPDDWLDQVRALAGQPKVVAIGEIGLDYYWNAAPAAQQEACFRAQLDLARELGLPVVIHSRDAHDDTIRVLRDAARGLTGVMHSFSGDWRYAEHCLEIGFSLSFSGPVTFPKAVDLHEVVRRTPLDRLLTETDSPYLAPHPLRGKRNEPANVRLIAERLAVLREMPLDALVDAVWRNAKAIFGL
>NC_009523.1|WP_011955106.1|404743_405967_+|response-regulator
MQHQVCILIVEDDPTIASLVGIVLREAGYRTLHADTAADALRLAETNPFDLVVLDWMLPDTPGVQICTALKERAGRRFLPILMLTAKGELSDRVTALDAGVDDYLSKPFYIEELMARVRALLRIRAAENERDAAMAALEAQNDALRVANEQLRTMQAQLVQSSKLAALGEIVAGVAHELNNPLAIILGNAELLSPQHDPEDQRSVAQIIESAKRARRVVQSLATFARRGPMAKEWTSPTDLIERVLDLKRAALRSSGIALEVVCSSDLPMIWVDIPQMQQVLLNLLHNAEYALAGMPAPQVWLTVVRGHAEKPPLPPAQAASAGGAFVCFDVADNGPGIPDHVIERLFQPFVTTRPPGRGSGLGLAIAYGIVTGHGGQILINTQAAQGTAVRVALPVDPPESVSGQE
>NC_009523.1|WP_157041227.1|405966_406545_+|uracil-DNA-glycosylase
MISLVQQQHCVRCPALVASRRRIVHGYGDVMSGIVFIGEAPGRHGADQTGIPFWGDRSGRILRRMLVRMGLASDETATASLRCFITNTVRCCPPGNRTPTAAEVQACREWLDTELDAIKPRLLVPVGRIALQEVGKRYLEGAPGAIRTLHATVLRGREVTILPMMHPARISRVDAEAFIAAMQPLVDGRNEP
>NC_009523.1|WP_011955108.1|406541_407693_+|acyl-CoA-dehydrogenase
MNFDLTPEHQRIRAEVRRFAEQEIAPRARHVDETGEFPAATLRKMAELGLMGLPFPEEYGGAGADSISTAIAIEEVARACGSTALIYSAHLGLGCAPIAMFGTEEQKRRFLRPAAEGRHLGAFALTEPHAGSDAGATRTTARLENGEWVINGAKMWITSASVAGHLIVTAVTDPGERHSISAIIVPAGTPGLSFGKPEAKMGLRGSITNAVTFEDVRVPEENLLGRRGRGLQQFLAVLDGGRIGIGAMAIGLAQAAFEIASAYARERTAFGKLIGAYESVSNMIADMAVGLEAARLLVYQAAWLKDQGRQYSREAAIAKLYASEVGEKICRDAIQVLGGYGYSSEYPLERIYRDQRLLTIGEGTSEILRVVIARQILGEFVGR
>NC_009523.1|WP_011955109.1|407986_409402_-|tyrosine-phenol-lyase
MTHPVPQTMGQQFGRRSWAEPWKIKMVEPLRVISREERERALAEAGYNTFLLRSEDVYIDLLTDSGTNAMSDRQWAAIMLGDEAYAGSRNFYRLEATVQQYYGYRYVVPTHQGRGAEHLISRAAIRPGQYVPGNMYFTTTRLHQELAGGIFVDVIIDEAHDPQHLHPFKGNVDLDKLEALIRREGAQNIAYVSLAGTVNMAGGQPVSMANVRALRALCDRYGIRIFLDATRMVENAFFIQEREEGYAQTPIAAILKEFCSYTDGAWMSAKKDSLVNIGGWVAVNDADLFDELRNLVVVYEGLHTYGGLAGRDMEAIAVGIEESVQDDYIRARIGQVRYLGELLTDWNIPIVQPVGGHAIFLDARRFYPHIPQHEFPAQTLAAELYLDSGIRAMERGIASAGRDPKTGDHYYPKLELTRLTIPRRVYTQAHMDVVAEAVKAVYDAREQTRGLRMVYEPKYLRFFQARFERLA

Crispr_ID: NC_009523_5

• CRISPR_ID: NC_009523_5
• CRISPR_location: 424995-425104
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_5

Consensus_repeat	Method
TAGCCTGCGCAGGCGGGCTTCGCCCTGGATAGCCGAGGGCTT	CRISPRCasFinder

spacers of NC_009523_5

>5.1|425037|26|NC_009523|CRISPRCasFinder
ATGGTCTTTGAATACATAATCCGCCA

CRISPR arrays and Neighbor proteins around NC_009523_5

CRISPR arrays

The CRISPR arrays of NC_009523_5

>merge|NC_009523|5|424995-425104|CRISPRCasFinder
TAGCCTGCGCAGGCGGGCTTCGCCCTGGATAGCCGAGGGCTTATGGTCTTTGAATACATAATCCGCCATAGCCCGCGCAGGCGGGCTTCGCCCTGGATAGCCGAGGGCTT

>NC_009523|5|5|424995-425104|CRISPRCasFinder
TAGCCTGCGCAGGCGGGCTTCGCCCTGGATAGCCGAGGGCTT	ATGGTCTTTGAATACATAATCCGCCA
TAGCCCGCGCAGGCGGGCTTCGCCCTGGATAGCCGAGGGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955116.1|417151_417919_+|Mut7-C-ubiquitin/RNAse-domain-containing-protein	unknown	unknown	gnl|CDD|376668
NC_009523.1|WP_011955127.1|432580_434122_+|response-regulator	unknown	unknown	gnl|CDD|225116
NC_009523.1|WP_011955120.1|421281_424887_+|chromosome-segregation-protein-SMC	unknown	unknown	gnl|CDD|274008
NC_009523.1|WP_011955117.1|418023_418971_+|2-dehydropantoate-2-reductase	unknown	unknown	gnl|CDD|235821
NC_009523.1|WP_011955114.1|415843_416413_+|redoxin-domain-containing-protein	unknown	unknown	gnl|CDD|239264
NC_009523.1|WP_041332740.1|413389_415051_-|PH-domain-containing-protein	unknown	unknown	gnl|CDD|367615
NC_009523.1|WP_011955122.1|426853_427306_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041332742.1|425739_426408_+|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|223710
NC_009523.1|WP_157040923.1|429519_429687_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040922.1|427398_429510_+|phospholipid-carrier-dependent-glycosyltransferase	unknown	unknown	gnl|CDD|224720
NC_009523.1|WP_011955128.1|434503_435229_+|carbon-monoxide-dehydrogenase-subunit-G	unknown	unknown	gnl|CDD|176853
NC_009523.1|WP_085979422.1|419549_421082_-|ribonuclease-Y	unknown	unknown	gnl|CDD|237177
NC_009523.1|WP_011955125.1|430830_431691_+|PHP-domain-containing-protein	unknown	unknown	gnl|CDD|223686
NC_009523.1|WP_011955118.1|419018_419360_-|stage-V-sporulation-protein-S	unknown	unknown	gnl|CDD|377254
NC_009523.1|WP_011955126.1|431913_432333_+|response-regulator	unknown	unknown	gnl|CDD|333815
NC_009523.1|WP_011955111.1|411486_413370_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955113.1|415013_415748_-|(d)CMP-kinase	unknown	unknown	gnl|CDD|234579
NC_009523.1|WP_011955115.1|416414_417155_+|diacylglyceryl-transferase	unknown	unknown	gnl|CDD|234599
NC_009523.1|WP_041332745.1|435279_435762_+|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|224991
NC_009523.1|WP_011955124.1|429700_430834_+|patatin-like-phospholipase-family-protein	unknown	unknown	gnl|CDD|132848

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955116.1|417151_417919_+|Mut7-C-ubiquitin/RNAse-domain-containing-protein	gnl|CDD|376668	pfam01927, Mut7-C, Mut7-C RNAse domain. RNAse domain of the PIN fold with an inserted Zinc Ribbon at the C-terminus.	1.72488e-67
NC_009523.1|WP_011955127.1|432580_434122_+|response-regulator	gnl|CDD|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	1.17322e-67
NC_009523.1|WP_011955120.1|421281_424887_+|chromosome-segregation-protein-SMC	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
NC_009523.1|WP_011955117.1|418023_418971_+|2-dehydropantoate-2-reductase	gnl|CDD|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	6.00468e-95
NC_009523.1|WP_011955114.1|415843_416413_+|redoxin-domain-containing-protein	gnl|CDD|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.90376e-46
NC_009523.1|WP_041332740.1|413389_415051_-|PH-domain-containing-protein	gnl|CDD|367615	pfam03703, bPH_2, Bacterial PH domain. Domain found in uncharacterized family of membrane proteins. 1-3 copies found in each protein, with each copy flanked by transmembrane helices. Members of this family have a PH domain like structure.	3.81464e-05
NC_009523.1|WP_041332745.1|435279_435762_+|(2Fe-2S)-binding-protein	gnl|CDD|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	4.35418e-86
NC_009523.1|WP_041332742.1|425739_426408_+|HAD-IA-family-hydrolase	gnl|CDD|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	1.72231e-50
NC_009523.1|WP_157040922.1|427398_429510_+|phospholipid-carrier-dependent-glycosyltransferase	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.11172e-12
NC_009523.1|WP_011955128.1|434503_435229_+|carbon-monoxide-dehydrogenase-subunit-G	gnl|CDD|176853	cd05018, CoxG, Carbon monoxide dehydrogenase subunit G (CoxG). CoxG has been shown, in Oligotropha carboxidovorans, to anchor the carbon monoxide (CO) dehydrogenase to the cytoplasmic membrane. The gene encoding CoxG is part of the Cox cluster (coxBCMSLDEFGHIK) located on a low-copy-number, circular, megaplasmid pHCG3. This cluster includes genes encoding subunits of CO dehydrogenase and several accessory components involved in the utilization of CO. This family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	1.10332e-62
NC_009523.1|WP_085979422.1|419549_421082_-|ribonuclease-Y	gnl|CDD|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0
NC_009523.1|WP_011955125.1|430830_431691_+|PHP-domain-containing-protein	gnl|CDD|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	7.35559e-25
NC_009523.1|WP_011955118.1|419018_419360_-|stage-V-sporulation-protein-S	gnl|CDD|377254	pfam04232, SpoVS, Stage V sporulation protein S (SpoVS). In Bacillus subtilis this protein interferes with sporulation at an early stage and this inhibitory effect is overcome by SpoIIB and SpoVG. SpoVS seems to play a positive role in allowing progression beyond stage V of sporulation. Null mutations in the spoVS gene block sporulation at stage V, impairing the development of heat resistance and coat assembly.	1.8429e-39
NC_009523.1|WP_011955126.1|431913_432333_+|response-regulator	gnl|CDD|333815	pfam00072, Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	4.24206e-41
NC_009523.1|WP_011955113.1|415013_415748_-|(d)CMP-kinase	gnl|CDD|234579	PRK00023, cmk, (d)CMP kinase.	2.5876e-83
NC_009523.1|WP_011955115.1|416414_417155_+|diacylglyceryl-transferase	gnl|CDD|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	5.86126e-33
NC_009523.1|WP_011955124.1|429700_430834_+|patatin-like-phospholipase-family-protein	gnl|CDD|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	2.44811e-47

Protein sequences

>NC_009523.1|WP_011955120.1|421281_424887_+|chromosome-segregation-protein-SMC
MYLRRLEIQGFKTFAGHTLFEFQPGITAVVGPNGSGKSNLVDAIRWVLGEQHPGALRCKRTEDLIFSGGGRRAPAGFAEVSLTIDNSDRLLSAPYGEVTITRRATRSGDQEYFINRQRVRLRDVQEIAAPINGAYAIINQGLVDAALNLRPLERRRLFEDAAAISVYEQRRTDAERRLRETNANVARCSDILAELEPRLRSLKRQAALARSHRDLMAELHELLQTYYVRLWLTAQTECAATEQAAQTLAATLAVRQAEMTAVSTDLLHLRERIRAIRDRIGSLHAESSALHARAGSVQRALAVGQERLAALSRQIEEQDRALRDLDHQRAARHTEQETVAAQLASAEQRLEQVRQEYAAHEARRAERIAGRAAFHQAFDAARRSLMEIGAALGAVQRQIAQINDQRDRLIRERATAGEALAIAQDELVARRAAAVQADAHVTALEQELNDAARRVELTTGDVEQRRRQRAAAAETLEALRRQQMELEARLETLRRLHRSYAGTFAGVRAAMQWAESQHRSGFALVATVVRVPAELETAIEVALGSRLHNIVVNRWEDAEDAIEALKRSGEGRATFLPLDTIRPRNADGVRIRLHTASEDGVLGVAADLIDVDERYRPVVELLLGRTLVVRTLAVARRELQRIGGGWTIVTLAGEQVSAGGAVTGGSAAKESGTLRRERELRELPERLEAVSRETEAARVRHVVANEAYVAAEQSVRDAERHQRQVQRQLDQARVAAAQTQRAVDRAEAEYLVCQRRIEQIDAGMTTLLDRLQAAIAEQEELMQREDAARAQVERLHAEEAVQRSADAADDEILAHLRTRLADAEGDVRTARAILHTVHQALARIDEQRAALAERIEHLHRERATLIDELTQTAAEHQALLAQIDTLRAQIEPSEAELSALEQQREAHEVRVQALTTALIDAEAACNRATVDAQRARDRLEVLRERAAGDAIDVESAAQSCADPSSDANVEDMQRRIDDLKRRIARLGIINPLALEEYDEAAARYEFLSAQMNDLRAASATLNELIAELDNAIRTRFETTFQVVAAEFERSFTNLFGGGEARLALINDDDDAADQNGGKPPGIATLGVEIIARPPGKRQQHLALLSGGERALTAAALLFAILKANPTPFCVLDEVDAALDETNVGRFREALVGLSEKTQFIVVTHNRGTIEAADTIYGVTMGDDGASRVLSLRLEEVGERGR
>NC_009523.1|WP_085979422.1|419549_421082_-|ribonuclease-Y
MQWLIWALPALVIGLAIGAGIGILIYKKSVQSQIRQIEAEARLQLEATRSEQKDLILRATDEALRLRAEAEAQIREARAALAKQEERLQRKEENLDRKIEGLERRERQLQQRERQMEQLHQEAEQLRQQQRAELERISALSQEEARAIILKRVEDETRDEAARRIREIEKNVREEADKLARKVISMAIQRCASEYVAEVTVSTVALPSEELKGRIIGREGRNIRAFEQLTGVDIIVDDTPEAVTLSCHDPVRREVARLALIKLLKDGRIHPTRIEEVVSKTQQEVEQIMREEGERVAYEANVQGLHPDLIKLLGRLKYRTSYGQNVLQHSLECALLAAHIAAEIGANINVAKTAALLHDIGKAVDHEVQGPHALIGAEIARRLGKSPAIVHAIAAHHNDEEPQTVEAWLVQAVDAISGGRPGARRETLDLYIKRLEALETVATSFTGVQRAFAVQAGREVRVMVQPDAIDDLGSIHLARDVAKKIEESLQYPGQIKVTVIRETRAVDYAR
>NC_009523.1|WP_011955118.1|419018_419360_-|stage-V-sporulation-protein-S
MASNLSHSTPATRAVGASGADVVERQSAEVLKVSTRSRPSAVAGAIAGVIRDSGVAEVQSIGAGATNQAIKAVAIARSYLSEEGIDIVCTPSFIDVAIDDEERTAIRLLVERR
>NC_009523.1|WP_011955117.1|418023_418971_+|2-dehydropantoate-2-reductase
MRIAVVGVGGVGGYFGGRLAQAGADVIFIARGDNLAALREQGLRIESIIGDAHVAPVQATDDPAQAGPVDMVLVATKTWQLDEAIDLMRPLIGPETGVVPLLNGVEASDRLAAALGESHALNGICYIFVARVAPGVVRHSGIHPLIIFGERDNRRTARVEALRDWLERAGVRVTIPPDIDAEVWRKFVFGATTSGLGAVTRAPMGLLRELPETRPLFIQGMREIVAVAQACGVALGEEAVTAALAQLDALPYETTASMQRDIMAGRPSELEAQNGAVARLGAAAGVPTPLHAFIYATLLPQERMARNRRLNEQSQ
>NC_009523.1|WP_011955116.1|417151_417919_+|Mut7-C-ubiquitin/RNAse-domain-containing-protein
MNILTVQERGLALIRVYGDLNDFLPPGRRETWFERPCKGHETIKNLIETCGVPHPEIGALIVGGHPVNFDYPVQPGDMIEVFPITMAPASSVTLRPPLDEPRFVLDTHLGRLAAYLRMLGYDSLYWNDAHDAELARLAGEERRILLTRDRELLKRSIVVYGSFVREVIPARQIVEVMRRFNLTPTSTVFQRCMRCNSLTTAVEKADIEHLLEPRTRLYFDTFRRCIACGKIYWQGSHYTRMATLLEHSVRLKVEG
>NC_009523.1|WP_011955115.1|416414_417155_+|diacylglyceryl-transferase
MYPIIELGPLNLGSGALLLVIAVFIGHTQFERIAHKRGGDELEQRARRCAPFALLGAAVGARLWYGLFNWDMYSQSPGLFLALRLGDLAWPGALIGGALAGYAYLRLRRLDAATAPLADAAALALPPAQAVAALGLLLSGEAPGAPTDVPWALPLFGVPRHPVPLYYLLAALVTWGVLVWFAPRVTRPGSLAMIYLALQGSAMLLLEALRVDSLVTVGGIRAAQIVGLAMLLIALWQKRAQMGRAL
>NC_009523.1|WP_011955114.1|415843_416413_+|redoxin-domain-containing-protein
MMFSRRVWDLLLIATLLTGGAFIWATRIAPVAPATAQAPEPAATQPAPLVGHPAPGFTLSAIDGSQVALDDLRGQVVLINLWATWCPPCRAEMPAIQQAYERFRDQGFVVLAVNQQEDATKVVAYMNDQRLTFPALLDSDARVGAAYQARVLPSSFFIDRRGIVRAVYRGPMSRGMIEGTIEQLIAETP
>NC_009523.1|WP_011955113.1|415013_415748_-|(d)CMP-kinase
MSAPSIITIDGPAGAGKSTLGELLARRLGYLFFDTGVMYRALAWAVLRHSINPEDDEAVAALVRRLDIQVHPPGDATDGRLYTVLVNGVDVTWELRHPEVERIVSITARHPAVRAILRDRQRAIGQRGRVVMVGRDIGSIVMPDAPLKIYLDASVDERARRRTNEIRQRGGSADLQHIRNEIIRRDSLDRHVSAPATDACIIVSDGLSPDQVVDLVVSRIDCDPDDSQDTRAYDRAETSDPAGT
>NC_009523.1|WP_041332740.1|413389_415051_-|PH-domain-containing-protein
MTEPKLPIPLELDSDEQVILVGKRHWIELLQSSLVFLVIGFITAAVALFRAAGGTLLIMREGVSRPLTDPINVALLTLTIVLVALWARGEAKKDRRKDTPWRNPDVLYLLAILALGLAIWFRSIGGELIVIDPVYARAGDAINIVLGLITTFMLLAVAYLYNDWRNDVLIVTNKRVIYDEETMFIRHVRQQILIDDIQQVNVRADTYQATLFGYGKIIIRSFSPRTLEFDFAAKPREIEKAIMDQVRNLRRRQQPDLLRALIEDQVYGNKIPPQSAPALQARTQRFPIPALYPPNPEIRDDRIIWRPSWVYVLLQLFRPLTGFALTMFVAAVLVQFRLLDGVAVSLVVLLALLVFGVWGWWIRESLINDTYILTRTDIIDIDRRPLGPENTRRAQLSAIQNISFDVSFVERLLGLGTVVIETGGAAGGKFTFDHVPDPRGVQATINDYLTDFRKHEKERQLQDALALLKQYDQVQREHGEKMDRESFEKAVEELIGRSLNNRSANETTVDTLNGAVATQIDAHLRRVARNARRRAAIRALHERMRRRNSEQPS
>NC_009523.1|WP_011955111.1|411486_413370_-|hypothetical-protein
MLYLRAVLIALLCVLSVMPVAAQEQASGLTMTLRPGYAGAYRLGEWFPITVDVANDGRDIQGVLEWSFPGWQNQPVFRRTIDLPRGSRKRVMLEAFATGFARNGTLRLIENGTVLFEQSVGVEAVEPDRFLILIVGSDPALLTSLSAMPISGVSGVTVRHISPEDLPLHALVLRGVNAIFIHDVDTAALSADQRTALRDWVYLGGQLVVGGGINGERAAAGLADLLPVEVTRTLNQGDLSPLEQFGGSEPQPSTGPLLTVLPRPGAEALPADRSLIYRRHAGNGVVIFSTFDLALLRGWASEPQLWSRVLQPIPLFVPAFEGRLNQISLMQNVLQIRSAELPPASALAAFLLAYILMVGPVNYLALRRIGRLEWAWWTIPLIVALFAGGVFVVGFVLRGGQAQLYQVSIIQGTERETRGIATAHLALFSPLRSSYALRAPAGSLLSETRSFDDFTARPLIATADDASVEVPDLLVDVASIRTLIAETTVEMPVQVESAIRLDDSDLAGEVRNVGRVAIEEAIVVHQGMFQELGDLMPGASARFDFSGSRGSFPFGVTISDDRMFNRRQILFQLFNNNLMRPSIGSPLDAQGVYLIGWSATPAVPLEMNGRSASQQGLTLFVIRLRTS
>NC_009523.1|WP_041332742.1|425739_426408_+|HAD-IA-family-hydrolase
MITFGAAIFDMDGTLLDNMPLYFRAFRVFIERHGLQPPPPSEAAQLIGRRQSDIFPALFGRPLTPEEIARYSDEAAQIYQDLLIGVTPLPGLVRFLDLLERRRAKIGLATSAPQATVAPTLAALGITGRFAAVTLGDEVPRGKPAPDIFLETARRLDQPPDRCVVFEDSLAGIAAARAAGMRCIALATTHSVADLRAAAPDLVVADYDELLRVLPELAVEEG
>NC_009523.1|WP_011955122.1|426853_427306_-|hypothetical-protein
MMEPYPAQPAVLTNRAQAAPTDPRTNHHTRTALQAIMRQLNKSLTVLASAADMLTQGRRGGAVSQSLLIWLQPNARQAEEALRRLREYQLTGSSAATELIQCLTVLVLAADMIVQGQLRDDTSLETYELLRRNADRALKSLEALKKEVLM
>NC_009523.1|WP_157040922.1|427398_429510_+|phospholipid-carrier-dependent-glycosyltransferase
MNILSFSLINSIPFDPGLEQRTMSPDVEQYLRWSVARRNGSNLLLQSSLIVAQRGGRMQIAEQNAASDASVCAEHRAARDVLKAPIIALMLGVLALAPRVIGLADFLTTDEAYHWIRFTERFDAAISEGRWADTIFVGHPAITMFWLGRAGLVLERAARDLGWIGAPSMIEHLAWLRLPGVFLQVVFGVTTWMVLRRLVDPMVALVAGFLWSTSPYLIAHGRVLHLDALLTGLLTLSLLLLLVSLRQQQAGAGGWTALLGSGALTGLALLTKGPAIIFLPFAGLMLFALAPAKDASNRRVSGVVSDVFRRLRYAIVRYGVWLGVALGVAFAGWPALWVTPEAALQAYVGEIIFNGGRPNGDGQFFNGQAVGDPGVWFYPVASLFRTTSVMFIGLVAFVVFAVIDGRRFFTQRDAVIPVLIAFAAFWTLVMTLGPKKFDRYVLPIWPVLLVLAATGIVRGYNAARAWCIRRAIVVPRGGDFLKRAPLAGLLIMGAIEIGQVVWYHPYYLSYYNPLFGGGAAAQRMFLIGWGEGMDQVGAWLSSRPDIGYGPVISALRPTLQPFVPVDVRDITDLGKLPVNYAVVYLESIQRGAHPDIYRQFEPMTPIHTITIHGIEYAKIYQLPRPYRQPVGARFGDAIMLHGVSVEYDQNHLTVTPSWGALAPPQGDYVVFLQVIDAQGQRVAGVDVPPSGVGGMPTGAWLPG
>NC_009523.1|WP_157040923.1|429519_429687_+|hypothetical-protein
MPLPLSLPPDLPTGEYEVILGLYDADSGERLPVSGNFDPASTAMRAIRVATLTYP
>NC_009523.1|WP_011955124.1|429700_430834_+|patatin-like-phospholipase-family-protein
MKKALVLSGGGGRGAYHVGVIEALVERGWMQDGVGPDIIAGTSIGAINAAALASGLTVAQLKARWLDMHTEDVHRLSGDLPAVSRPLVRFLMRSVLTSEAHGGASVVLPPEERSMSAQGLLERIGQVFRTRPFRSLLDTAPWRHTLSRWMDFDRINAPDAPALLLTATDLQTGDLRVFCNRPLRDHPADRITLDHLMASSSIPTVYPWTEIDGRKYWDGAVLANTPLGPVIDLAAGDDVEIVVVMMTPWDVAPEAMRQQLQSVPEDLVQALSLTLDWALLASYRAAIKMLRAYNRLAEAARKLERAAQQTGDPALTLEGNIPRIIAEPLVIAPQQLMPLEWIIDYEERNHLALFEMGRNDALRALDTRLLNRLLDQP
>NC_009523.1|WP_011955125.1|430830_431691_+|PHP-domain-containing-protein
MIDLHIHTNATPHHATWTPDTLMAAAVRAGLQVIAVTDHNTTASVRAVQEAGGRTGIHVISGVEIDAGFPAGQRDDRLPFKLWHVLVYGADPEHPSLLALCRSVDERNLADADGLQRHLIAAGFRLPGIDAIERPPRVADIGAALGRANDLPDRAPEDDDESAGMRYILTRLPGMYRPPGVEEIVAVARETGSVAVLAHPGRSKGVYAIPATAEDIAVMAEVGLDGIEVYYPTHRPEQIAMYRHLAQQHRLLITGGSDSHHPHQPLARWPAAWCRAFLERVGCVTN
>NC_009523.1|WP_011955126.1|431913_432333_+|response-regulator
MSVTTERSHNGHNADTVLIVEDDAATRRLYKFLLSNGGYVVLEAEDGVAAVEVLQRHRCDLVITDMNMPRMDGLDLIRTIRRDFGDIYVILITAFGTPDTQKQAMRLGANDYLAKPFDFEELERRVHTYFQNRPRPSAP
>NC_009523.1|WP_011955127.1|432580_434122_+|response-regulator
MNQSLSTNADPVSILVVEDDPMVNSFCARLLHMKGYSVKTVFNGREALTMLQTNRFDLVLTDLQMPEMGGMELLREMREQHPDIDTIMFTAYATVETAREALKLGAFDYLTKPFSVDELERTVRRAVEWRRVRQERQRLSEVVALYEISQAFTSTLDTETAVNEIVGLLWRRFSPATLSLSLVHPDDNELELLALRGTASRVAVGARIPLQCTPGKESLCEDHLRLTGAAVSVPSTHAARFVLRSNDRIVGVLDLSRAPDQPGFDQDDRTLLTICASQIAASLDNSRLYRQLKQQNIEMIAALAASIDARDPYTAGHSMQVMRYAVRLGEVIGLDAARIEALRYGGLLHDIGKIGVPDAILLKPASLSSEEMEIMRAHAVIGVEIVRGVKALRPVLPVIRHHHERIDGAGYPDGLSGDQIPLEARIMAIADAYDTMTSERAYRRAMTQDEAIAELRRCRGVQWDADLVDRFVELLKSEAQALRLQPRAAQASLDQNVLHVPHLFVSLGDLHID
>NC_009523.1|WP_011955128.1|434503_435229_+|carbon-monoxide-dehydrogenase-subunit-G
MKISGSYTIDAPRDVVWEALNDIEVLARCVPGCERLEQVGDNEYEGTIKIGIQAIRGVYSGRIRIEDIDPPNHYKLIASGKSANGVVDGVGTVDLVAQDGKTLLMYGGEAQVGGTLASVGQRLIEGASRQLINQSLKALAEQVATRVAAPVAAAAEAPAAPSAAEAPAAPAAAVAETPAAPPPPTPERRTVVVPPEEQLRPESVVFGIINDFISERPWAPWIVVAFLLGYILGRSRSRRER
>NC_009523.1|WP_041332745.1|435279_435762_+|(2Fe-2S)-binding-protein
MATITVTVNGKSYTSEVEPRTLLVHYLREHLNLTGTHIGCDTSQCGACVVLVDGVSVKSCTMLAVQADGANVLTIEGLAQNGQLHPLQEGFWECHGLQCGYCTPGMIMAAYDLLQRNPEPTDEEVRHGLEGNLCRCTGYHNIVRAVQYAAAKMRSEEVPA

Crispr_ID: NC_009523_6

• CRISPR_ID: NC_009523_6
• CRISPR_location: 522310-522532
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NC_009523_6

Consensus_repeat	Method
ACGTTCAACCTTCACCGCTCAACCTTCAACCTTCAACC	CRT

spacers of NC_009523_6

>6.1|522348|23|NC_009523|CRT
ATCCTCCCAACGTTCAACGTTCA
>6.2|522409|30|NC_009523|CRT
CCCAACGTTCAACCATCCTCCCAACGTTCA
>6.3|522477|18|NC_009523|CRT
TTCACCGCTCAACCTTCA

CRISPR arrays and Neighbor proteins around NC_009523_6

CRISPR arrays

The CRISPR arrays of NC_009523_6

>merge|NC_009523|6|522310-522532|CRT
ATGTCCGACACTCAACGCTCAACCCCCAACGTTCAACCATCCTCCCAACGTTCAACGTTCAACGTTCAACCTTCACCGCTCAACCTTCAACCTTCAACCCCCAACGTTCAACCATCCTCCCAACGTTCAACGTTCAACCTTCACCGCTCAACCTTCAACCTTCAACCTTCACCGCTCAACCTTCAACCTTCAACCTTCACCGCTCAACCTTCAACCTTCAACC

>NC_009523|6|1|522310-522532|CRT
ATGTCCGACACTCAACGCTCAACCCCCAACGTTCAACC	ATCCTCCCAACGTTCAACGTTCA
ACGTTCAACCTTCACCGCTCAACCTTCAACCTTCAACC	CCCAACGTTCAACCATCCTCCCAACGTTCA
ACGTTCAACCTTCACCGCTCAACCTTCAACCTTCAACC	TTCACCGCTCAACCTTCA
ACCTTCAACCTTCACCGCTCAACCTTCAACCTTCAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955199.1|523857_524982_-|restriction-endonuclease	unknown	unknown	gnl|CDD|377369
NC_009523.1|WP_011955200.1|525035_527123_-|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|380161
NC_009523.1|WP_011955202.1|529611_530814_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NC_009523.1|WP_011955207.1|534981_536049_+|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|185037
NC_009523.1|WP_011955192.1|513508_514873_-|aspartate-aminotransferase-family-protein	unknown	unknown	gnl|CDD|223239
NC_009523.1|WP_157040932.1|536874_537021_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041332777.1|532907_533915_+|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|236898
NC_009523.1|WP_011955190.1|509116_510601_+|sugar-transferase	unknown	unknown	gnl|CDD|274398
NC_009523.1|WP_011955206.1|533927_534947_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223521
NC_009523.1|WP_083763241.1|507914_509120_+|glycosyltransferase	unknown	unknown	gnl|CDD|274425
NC_009523.1|WP_011955194.1|515809_517147_-|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|143501
NC_009523.1|WP_011955193.1|515184_515772_+|hypothetical-protein	unknown	unknown	gnl|CDD|377558
NC_009523.1|WP_011955201.1|527558_529520_+|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173878
NC_009523.1|WP_011955203.1|530830_531835_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NC_009523.1|WP_011955195.1|517218_518679_-|potassium/proton-antiporter	unknown	unknown	gnl|CDD|235410
NC_009523.1|WP_157040931.1|521220_521622_-|DUF1949-domain-containing-protein	unknown	unknown	gnl|CDD|378135
NC_009523.1|WP_157041231.1|519732_521208_+|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011955196.1|519010_519517_-|thiol-peroxidase	unknown	unknown	gnl|CDD|179055
NC_009523.1|WP_157040930.1|510811_513427_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041334644.1|531927_532890_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223521

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955199.1|523857_524982_-|restriction-endonuclease	gnl|CDD|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	7.68172e-35
NC_009523.1|WP_011955200.1|525035_527123_-|GAF-domain-containing-protein	gnl|CDD|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp|Q2G2U4.1|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	4.89396e-70
NC_009523.1|WP_011955202.1|529611_530814_+|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	2.3297e-88
NC_009523.1|WP_011955207.1|534981_536049_+|dipeptide-ABC-transporter-ATP-binding-protein	gnl|CDD|185037	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional.	1.10491e-157
NC_009523.1|WP_011955192.1|513508_514873_-|aspartate-aminotransferase-family-protein	gnl|CDD|223239	COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism].	0
NC_009523.1|WP_041332777.1|532907_533915_+|dipeptide-ABC-transporter-ATP-binding-protein	gnl|CDD|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	2.67756e-158
NC_009523.1|WP_011955190.1|509116_510601_+|sugar-transferase	gnl|CDD|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	1.43239e-124
NC_009523.1|WP_011955206.1|533927_534947_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0
NC_009523.1|WP_011955194.1|515809_517147_-|diaminopimelate-decarboxylase	gnl|CDD|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	2.65698e-165
NC_009523.1|WP_011955193.1|515184_515772_+|hypothetical-protein	gnl|CDD|377558	pfam05818, TraT, Enterobacterial TraT complement resistance protein. The traT gene is one of the F factor transfer genes and encodes an outer membrane protein which is involved in interactions between an Escherichia coli and its surroundings.	0.000456944
NC_009523.1|WP_011955201.1|527558_529520_+|peptide-ABC-transporter-substrate-binding-protein	gnl|CDD|173878	cd08513, PBP2_thermophilic_Hb8_like, The substrate-binding component of ABC-type thermophilic oligopeptide-binding protein Hb8-like import systems, contains the type 2 periplasmic binding fold. This family includes the substrate-binding domain of an ABC-type oligopeptide-binding protein Hb8 from Thermus thermophilius and its closest homologs from other bacteria. The structural topology of this substrate-binding domain is similar to those of DppA from Escherichia coli and OppA from Salmonella typhimurium, and thus belongs to the type 2 periplasmic binding fold protein (PBP2) superfamily. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. The type 2 periplasmic binding proteins are soluble ligand-binding components of ABC or tripartite ATP-independent transporters and chemotaxis systems. Members of the PBP2 superfamily function in uptake of a variety of metabolites in bacteria such as amino acids, carbohydrate, ions, and polyamines. Ligands are then transported across the cytoplasmic membrane energized by ATP hydrolysis or electrochemical ion gradient. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	9.87525e-52
NC_009523.1|WP_011955203.1|530830_531835_+|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.91413e-87
NC_009523.1|WP_011955195.1|517218_518679_-|potassium/proton-antiporter	gnl|CDD|235410	PRK05326, PRK05326, potassium/proton antiporter.	0
NC_009523.1|WP_157040931.1|521220_521622_-|DUF1949-domain-containing-protein	gnl|CDD|378135	pfam09186, DUF1949, Domain of unknown function (DUF1949). Members of this family pertain to a set of functionally uncharacterized hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement.	5.30615e-07
NC_009523.1|WP_157041231.1|519732_521208_+|PAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	3.48488e-29
NC_009523.1|WP_011955196.1|519010_519517_-|thiol-peroxidase	gnl|CDD|179055	PRK00522, tpx, thiol peroxidase.	8.54597e-77
NC_009523.1|WP_083763241.1|507914_509120_+|glycosyltransferase	gnl|CDD|274425	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.	4.24014e-70
NC_009523.1|WP_041334644.1|531927_532890_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0

Protein sequences

>NC_009523.1|WP_157040931.1|521220_521622_-|DUF1949-domain-containing-protein
MRKDRPQQRQCQRTLHRHGGSAENAAPQRQRQKQRQRQHSRRIPQQAWSITLRLRSNTRFNRNIRHARHYTIDNPVSAYEPIQRLIAAHRGTIEREEFAATVTLEIIAPDANVAALTGALRTITAGQVQIAAV
>NC_009523.1|WP_157041231.1|519732_521208_+|PAS-domain-containing-protein
MNFVLILLSMIILTATGVYVLIQDWRATTNRLFALFALSAVLLMYCAVLRFTGSDPWEVWFVYGLSAPLLAVSSWLLIWLILAIFIPHRYAQPTVRRALAAPYLFMALFLTLDWYSGLGLVRRMDASEATGMPGLLNGPLYMLVIISYILGGLLVPVAMLITVAARRRSVRVPAAWLSGGLALSFAAGAWFGPMYWLALNYVSMLPLYLAFGWLTLRYQMFRPSQVALRTAVESLPDGVVIIDAQRQVRFANRAARQLASLNDDGETTFETALARAGFQDCTMSEDRLAGVRRFHREGEAEATLIVSEVAIKGDHTSGSVLLLRDVTTAERQRAALAASHAALEERTAALERSLDEIRQRDAMITRLTLPLIPLSEGVLALPLIGAFTGERSQAMVTLLLNQIEQRRAQKVLLDLTGITGFDHSLAVALHQAADGARLMGAQIVLCGVRPDIAESIVRERLEIHGIQYFATMQEGVAALLHQSNRSSPVHQ
>NC_009523.1|WP_011955196.1|519010_519517_-|thiol-peroxidase
MERANAFDFLGPRTLVGPELKPGDRAPAFKLTTGKATISSEQFAGKPLVISVIPSIDTGVCSKQTRRFNEAAAELGDAVNILTVSADLPFAQGRWCGAEGVDKVIMASDHLDMSFGAAYGTYVKELRIESRAVFVVDKDGIIRYAEYVPVAGHEPNYDAALAALKELL
>NC_009523.1|WP_011955195.1|517218_518679_-|potassium/proton-antiporter
MSLELILMIAALLLILSIIAGKASLRFGLPAPLLFLIIGMLAGSDGPLGIYFDDAWLAQSVGVLALVLILFSGGLGTDWQMIRPVLWTGMILANLGVLISALLVAVAAHLLLQFSILEGFLLGAIISSTDAAAVFAVMRTRDVNLRDNLEGLIELESGSNDPIAVFLTIGLTMVLADPSRSLASLAPLFVLQMTVGGVAGYAMGRLMAITINRAKLQLEGLYPALALGLVLLTYGGTALINGSGFLAVYLAGIVLGNCDFAHKRSLIRFYDGLAWLMQIAMFLVLGLLVYPSRIVPIIGEGLLMSAFLVFVARPVAVFVSLAFSRYDWRAKAMVSWAGLRGAAPIVLATFPLLAGLDRAGMVFNLVFFIVLTSVLIQGTTIAYVARWLGVQQPRPQATFHYPQEFIPQVSASSQLVELTVAPGSPACGRAIMELGLPRGALVVLINRSDDSLVPGGTTILEPGDRVLLLAERSALDDVRRVLSNEG
>NC_009523.1|WP_011955194.1|515809_517147_-|diaminopimelate-decarboxylase
MESLPSQNRNPPPNAGLWPLTTSVDHGGRLFIGGCDVAALTQQYGTPLYLFDEMTIRAACRACRTAFADHYRGTTAVHYAGKALLNIAIAQIIADEGLGLDVVSGGELYVALRAGFPTQRIHMHGNAKTHAELEQALAAGIGQIIVDNLDELDMLRRLTAHRSSPQPVALRIAPNIAADTHAHIQTGHATSKFGLPLDALDAAAEKLCAASGVRLTGLHAHLGSQLFDRAPYAAAVEVLLDSAARLRDRFGVLIEEINAGGGIGVPYTTDQPLPDIDAWAALLGDSLVRGCERRGLPLMRLVIEPGRSIIARAGVALYTIVATKPLPHMRFLHIDGGMGDNIRPALYDARYTAALAERMRDPVEECVAIAGRYCESGDVLIRDLMLPRARVGEILAVPVAGAYTLSMASTYNLAPRPAVVLINEGEARLIQRRETYEDLIAREVW
>NC_009523.1|WP_011955193.1|515184_515772_+|hypothetical-protein
MGIFDSLFGRDRRNQQPRPATGPATRLSDEQALERYRYFLRTAPPDAIEQAYADAFAQLTPEQRAYALRELTAMLPPHERASVPQQDDPQTLARLATRAELREPGIMERLFSRNDAPAPPHAAQAQSGMGFGGAFAGTLLGAMIGGVIGSMAAQAILDGFGADEMIGDMGMEDLTGGFEDFGGDLSAEFDMGDGW
>NC_009523.1|WP_011955192.1|513508_514873_-|aspartate-aminotransferase-family-protein
MTAIDVADRIQSDLAHLLHPLYHPSGHQSPKIWVKGRGAIVIDIEGREYIDGLSGLWNVNVGHGRRELAEAAAEQMTTLAYCSAYTGSSNLPAINLAERLSQLMYPSINTFFFTSGGAEATETSFKTARYYWKLVGKPEKVKFIARMRGYHGVTMAAMSATGLPVYWPMFEPRMPGIVHIESPYPYRFVNPTPEVSDGVAAANLLEEAILREGPETVAAFIAEPVQGAGGVIVPQDDYFGRIRAICDKYEVLLIADEVITGFGRTGRWFALEHYGIEPDIVQFAKGITSGYVPLGGIGISDRIREAIHSAPPDKRYMHAYTYSGHPTCCAVALRNLRIIEEEGLVERAAVLGDRLLTGLKTLEALDGVGDVRGKGMMAAVELVADKTTKQPYPTEANVGARVYQEMLKRGLFTRVLGDMILLAPPLVSTEEQIEQIVAIIGESVQAVIAATPSP
>NC_009523.1|WP_157040930.1|510811_513427_+|hypothetical-protein
MQHIALATLLAVIVFGAGLACAPHSLYFDAADSVASRHLVKFSAAESNERERYRWSERGAIVLLFGLTRHPLIIDLRMTSPRPPNAAPAETRLGLGSWRSNAFVVEGDWRRYRVLLPPRPGAPDLRLDMRAFRPAKARDTRELGAAFTRVAVHPVDGLPAPGLAIATLGGIRTVVLLLLPIATFVVMSQLAGRVLPWFAAAAVAGLVAVGAARPVDAVALLPDLWLIPVGTAVGAGIFWGIQSHLSPGLAVLRQFLASDRARLACVLVVASVQGIVFLTLVPPWHHDDEPSHFEYVWLMAFRPSWPAVRTPDPEIAQIGGTGSALSHFPTYYLIVGLPLRFTSGLTVIEQLYVARSVSLVMFVVTVAILGGIARTLFHEGHHMRWLMPLTAALIPPFANIMTAVNNDVGAILGFSLFLWSVVRIIMLGWSTRRAAWVVSAALIAAAMKNVAVAAIFIAPLVLVIAVGLHRRWRWKPLIAALVGAGAVILGSILAWGDPAGWYRYGAVSIDGAARAVVSDSDTPHGQQAFRLTSSISLYDDFSGLATPIASADVPLIAGRTITIGAWVWASHPVTIAGPGVLYNEGARPAVVMTPVIEASTTPRFVAWTFEAPEALSSLQVFIPAPPPAAESPVTLFVDGVVAVQGSFSADTPPIFDRSATSGFWEGRPFANLVRNGSAEQAWPYVRPEVDSAARYLVRISLSRIAASMFDIERTVPLILFDRVPDIIFRSFASLGWGRLMLTGDIWLLALNFVFLITVAGCIRLAVTHNDRSSRRIAIVVFLVIGLLMWMNAVLRTMHAPSVQPPPLPRYGFPAVGSLTLVLAGGWLAWWPPQRRTIGIVTLVLSLVMLNALAYSTIWWLRVVYNAYASSG
>NC_009523.1|WP_011955190.1|509116_510601_+|sugar-transferase
MSRRSVLNHPTQPCEMSFHLRLEISERRLLLRVGDLALTMLAVFGALWFWARLADRALNVALIQSQFSWLALIGIGWPLWLMLADMYNLRLVARIGPSVRRILLGGLALLFAYLALFFVLSRAPVTGMLASIEIGTPQLRLAPALAIVLLVASMAIWRLAYIRVLGAPHARRRLLILGTGQAGSALSHVILKGHTPYYEIVGFVDDAPLPSCDCIGSVPVLGGVDRLGDVVWDQRVDEIVIASSDVSGELLQFLIDCYEHGVAITPMPLLYERLTGKIAVEHAGNQWHVALPLQSRPTRTAEAVLKRMLDLVGGLVLFGLLLVLLPFIALAIRLDTPGPILYRQQRVGWRGRIFTALKFRSMVQDAEPDGEAQWASKDDSRVTRVGRWLRRTRLDELPQALNVLRGEMSLVGPRPERPEFVEQLQRVIPFYRARLAIKPGLTGWAQINYGYGNSIEASLAKLQYDLYYLKHQSFWFDLLILARTVYVVLLMKGQ
>NC_009523.1|WP_083763241.1|507914_509120_+|glycosyltransferase
MGDGMRGAAMNILFVAPRFPDPLIQGDRLRARQFLRVLRRWHEITLVTPATPELPDAATIADMCDRWVPVHEPRWRALWRVASHSIETLPLQTALFSSPALIRTVRDLAHHQSFDLLYLHTARVAPVVDAVPDLPKAIDFIDALSLNMYRRARCQGGITHWLFDIEARRMAECEQYLSEICDVQFVSAVRDRAFLGPNVRVVNSGVDVAQFPYVEQGRLNDLIVLTGRMGYFPNADAAVSFASNVLPLVRHEVPTARLQIVGADPPQRVRALARLPGVEVTGHVPRIQDYLQRATIAVAPLRSGSGFQTKVAEAMASGTPVVATPHILDSLDVRHDEHVLLAHDDAEMAAQIVRLLRDAALRRRLARAARALVEQRYTWERSAAAINAHLVAVVQQGKKIS
>NC_009523.1|WP_011955199.1|523857_524982_-|restriction-endonuclease
MTYLDAAYTILKAAGQPLHYEAITQEALKQGLIKPQGATPAATMGSRLYTDTLEEGSRFVRAGRGTFGLAEWRPRGIDAHVSDINADTRKQLREMVLNMPPDRFEALIRELLIRMGFDESTVQITPYRSDGGVDVIGIYRAAGLTEVSAAVQVKRWKGNVGASIVTQLRGSLQVHQQGIIITTSDFTKDARREAVEANKTRIGLINGDELIDLLVKHQVGVVKRTLEVTVLDDEYWSELIGQSSAPSVPTVSLPDPVAPRPAPTVKTRLMPGKPKGFILFGEFYAANTWRGVLLGVCQALAQRCDNFATVATIIKGRSRQHIADSPTGMISPAPIPGAALWIETNQSARSVLWIIAQLLEALGRSPNDFEIVVS
>NC_009523.1|WP_011955200.1|525035_527123_-|GAF-domain-containing-protein
MYALSSTSATLPIILHASRLLAGDQALEMRLPGVFDLLRTAIPFHDGRVTWWRHEPIAASTGDQWYAPNGWSLPWHDDLLHEVIARGAPCRRVVDAAGDPALHYGAPIIWNRRLWGVLELRGDHQMIIGDEEQALIDALSPLLAAAIASSSNTNIDTPILTTRQQRVLDALRAELEAPLDLGELLTFLLRWALDATGAEAGAIGVVDRERGEVTLQAYEGYGANPLSRDAFGETRRRWNWSVGVAGKVARTGRAILLRDVSHDPDYQALNPEVRAELAMPIGADQPLAVLILDSPRSTAFGDGEVAFVKALCDLAVNPLRRALHYQQLLETSTHLGQVFSSIPGGLALMDQQGRVLRHNPAWLTIWGLPSGSMRDPFYVPLDLVPLLLPRLRDPLALTGMCAEGQRAPTEVQSLLVQLTSPHQELMLLSVPTRDSFGSLTGRLWIVSDVTREREADRLKSEFLSIISHELRTPLTSIMGYTELLLAREFSPAERREFVQTVYNEANHLYQIVEDLLGVTRLEAGNVRLNQWAVSLRQIVSDLTAQLNNQISGKHTMLIDIPPHLPPVYADRDKVRQVLVNLITNAVKYSPNGGEIRLTISDNVELPPDHPRGKFVRVAVSDQGIGIAPEDLPRIWERFYRVDNGNTRRIGGTGLGLSIAKALVELHGGRIWAESKLNKGSTFYFTLPVATDLVRR
>NC_009523.1|WP_011955201.1|527558_529520_+|peptide-ABC-transporter-substrate-binding-protein
MKILDRKIALTLLLALVAPILAACGGGTAQQPIRETVVVTAEPVRETVVVRETVVAEAPTAAPSGAFTTPHPILSDVRVRQAIAYCTNRPELIQSVYSYLTPEQQQELLMDTNLPKTHWAAASEADGIVVYPFDPDKGKALLEEAGWKLPEGQRVRAKDGEPLSLEFTTTNAQFRITWATVLEKQLLDNCGIQIIRKHAPASWWFGGASGLRRRDFELGAFAWVGEADPGGRTLYACDQIPLPDNNWNGQNYMGWCNETASKAITAANNTLNREERIKNYKAFQVEFTKDMVSLPLFQRLEAYAWNKALRGLKPDPTEYITANAYQWERADGGDTIILGFTQEPASMFTLVESAAVQRQAAQLVEGVLTTQYSYDFQPVLQDGLATIESGKAKNEVVEVKEGDKVWDATGAAVELKPGVEIINSDGETVKYESGTVKMNQLTVTYDLIKGIKWSDGEPLKKADLELGVKIACDPDSGAVSLTFCESHDNLNGVTFNSDTSYTIKFLPGVQWPIYFTAPYGGYPSHVTVSDGRKLADVPAKEWATLPEVAEIPLGYGPYILKEWKKGEFMKFEANPNFVLGAPKVKNVIIQFYADTNAAVAALLTGEVDILEKATLGAGPEVETVLKAAAEGKIEAKTDASPTWEHMDMNLFIR
>NC_009523.1|WP_011955202.1|529611_530814_+|ABC-transporter-permease
MTTYLIRRLIQMVIVAILSAMLGYSLLYIAPGGPLLFLQQMQNTGQRRVTEEDIARLKARYELDLYLPIRFTRWLIGFPAGPVQIGGVNLIPPDTVVGCAIPGQVRLRYPDGTVEIIEEGCVRVVTLANLAERRTSRGILFGDFGLSQQIARDRPISDLLMSRLPYTLQLMGVSTLLAIMIGVPVGIYSAVRQYSRFDYAMTGITFIGSSLPTLFMGVMAILIFSVLAKDAGLPYLPSGGAQGIRNYDIPWVGTVQAGSALDRTLRFIMPCAVLTFFNIAGWSRFIRASMLEVLRQDYVRTARAKGVRERAVITRHALRNALIPFVTLLAGVLPTLVAGAAITESVFNWPGMGRLLVDALGRSDYTVAMSILFISTVLVLIGYLISDILYTVVDPRIRLT
>NC_009523.1|WP_011955203.1|530830_531835_+|ABC-transporter-permease
MATTTSAPAAPGALDRLQTRSEGQWAVVFRRFRRHRLAMVSLAVLILIFTASILAPWIAPFPRDDIGLNRTRLPPMSADPATGQLHILGTDHLGRDFFTRVIYAARVSLMVAVSVTTLVAIIGTTLGLLAGFFGSWVDNTISRIMEFVATIPDLPILLILSAIMIQNADLIVLPSWIIGPVAWIMAVPNREATQVALLILVLASLGWVGVARLMRGMVLQVREMQYIESARALGGSNAWILLKHVFPNAFPPLIVAFTLGLNGALVSEVAISFLGFGVQDPTPTWGNMMGFATSYMFNHPWMPLIPGLPIFLCSLAFNFIGDGLRDALDPRLKL
>NC_009523.1|WP_041334644.1|531927_532890_+|ATP-binding-cassette-domain-containing-protein
MRGLKTYFFTEAGVVRAVDGIDLTVHRGEALGIVGESGCGKSVTSLSIMRLIQDPPGKIVEGQIIFDGTDIRSLSEEDMRHIRGNRISMIFQQPTTCLNPVFRVGDQLIEALEIHQGLRGEEARRRAIELFSLVGLPDPERRINQYPHELSGGQAQRVMIAMALACNPELLIADEPTTALDVTIQAQILDLMRELREKINTSIILITHDMGVIAEMVDAVAVMYAGQVVEYADVRSIFAEPKHPYTQGLLASIPVLGEIVDELATIPGTVPSLINPPAGCRFADRCARRFARCDEPPPMFDLEGGRQVRCWLYAPDAQTS
>NC_009523.1|WP_041332777.1|532907_533915_+|dipeptide-ABC-transporter-ATP-binding-protein
MTTAGQRSVSSDTLLEVNNLVKHFPIKGGILRRTVAVVKAVDGVSFTLKRGETLGLVGESGCGKTTTGRTILRLEKATDGEVIFDGKDVLAASGSQLKALRRDMQIVFQDPYASLDPRMTIGESVAEGLTIHGIGSKAERIERVREVLAKVGMHPSHMERFPHEFSGGQRQRIGIARALVMNPKLIVCDEPVSALDVSIQSQVLNLLRNLQQEFGLTYLFIAHNLSVVEHISNRVGVMYLGKMVELADRMELFRRPLHPYTKALISAIPIPNPTIRRERIILQGDVPSPINPPKGCRFHPRCWMARDICREVEPVFEEKAPGHWSACHFAHEVSP
>NC_009523.1|WP_011955206.1|533927_534947_+|ABC-transporter-ATP-binding-protein
MSQPLLVVKNLETQFKTQDGIVKAVNNVSFHVDRGETLGIVGESGSGKSVTSLSIMRLIPNPPGRIVGGQIIFDGDNLLDYTEEEMRHIRGNRIAMIFQDPMTSLNPVLTIGRQITESLELHMKLTPKEARNRAVELLQMVGIPGAERRLDDYPHQFSGGMRQRVMIAMALSCNPELLIADEPTTALDVTIQAQILELIQRLQHELGTAVIIITHDLGVVAGMADRVIVMYAGRVVEEGPTEEIFARPRMPYTIGLLRSIPRLDEEEGRTLTPIRGLPPDLINLPQICPFSPRCDYFIPGTCDQQVPPLREVVPGHKAACLFDITLETPLPTTGGEVPA
>NC_009523.1|WP_011955207.1|534981_536049_+|dipeptide-ABC-transporter-ATP-binding-protein
MSATSTDLIQVRNLKMHFPVTKGAIIKRTVGYVKAVDGVTFSIKRGETLGLVGESGCGKSTTGRAILQLYKPTAGEVLFQGTDLTRLHGEELRRMRRKVQMIFQDPYASLNPRMTVGDIIGEPIAVHNLRQGKAAIRERVQELLELVGLNPYFINRYPHEFSGGQRQRIGIARALAVEPEFVVCDEPVSALDVSIQAQVLNLLEDLQHRLGLTYLFIAHGLAVVRHISDRVAVMYLGKVVELAEGKKLYSMPMHPYTQALLSAAPIPDPTVERKRQRIILEGDVPSPFNPPPGCHFHTRCPIAIERCKVEEPPFQDYGDGHFVACWRAPESIALMEQYVARPNNGASPGVPQASA
>NC_009523.1|WP_157040932.1|536874_537021_+|hypothetical-protein
MTIGWGEALIIFFILAFLLALAFRGGYVRGRVRRSGASRKKDQNQPDG

Crispr_ID: NC_009523_7

• CRISPR_ID: NC_009523_7
• CRISPR_location: 687465-687560
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_7

Consensus_repeat	Method
CCCTACATTGCCCCTCGCCTCGCCCC	CRISPRCasFinder

spacers of NC_009523_7

>7.1|687491|44|NC_009523|CRISPRCasFinder
TCGCCGCCGCCGCTGCCCCCGGTACAGGCGCAGCGGCGCTACGC

CRISPR arrays and Neighbor proteins around NC_009523_7

CRISPR arrays

The CRISPR arrays of NC_009523_7

>merge|NC_009523|7|687465-687560|CRISPRCasFinder
CCCTACATTGCCCCTCGCCTCGCCCCTCGCCGCCGCCGCTGCCCCCGGTACAGGCGCAGCGGCGCTACGCCCCTACATTGCCCCTCGCCTCGTCCC

>NC_009523|7|6|687465-687560|CRISPRCasFinder
CCCTACATTGCCCCTCGCCTCGCCCC	TCGCCGCCGCCGCTGCCCCCGGTACAGGCGCAGCGGCGCTACGC
CCCTACATTGCCCCTCGCCTCGTCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955326.1|685193_685538_+|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236
NC_009523.1|WP_011955321.1|678065_678542_-|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl|CDD|236483
NC_009523.1|WP_157040945.1|684554_684818_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955335.1|691586_692267_+|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl|CDD|376827
NC_009523.1|WP_157041237.1|688069_688321_+|ferrous-iron-transport-protein-A	unknown	unknown	gnl|CDD|377199
NC_009523.1|WP_011955324.1|683311_684448_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	unknown	unknown	gnl|CDD|236515
NC_009523.1|WP_011955339.1|698897_699194_+|energy-coupling-factor-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|179494
NC_009523.1|WP_041334684.1|684913_685204_+|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|224583
NC_009523.1|WP_041332858.1|686465_687230_+|metal-dependent-transcriptional-regulator	unknown	unknown	gnl|CDD|224240
NC_009523.1|WP_011955323.1|681092_683315_+|methylmalonyl-CoA-mutase	unknown	unknown	gnl|CDD|236508
NC_009523.1|WP_011955334.1|690734_690989_+|hypothetical-protein	unknown	unknown	gnl|CDD|370243
NC_009523.1|WP_011955338.1|698151_698901_+|energy-coupling-factor-ABC-transporter-permease	unknown	unknown	gnl|CDD|181384
NC_009523.1|WP_011955327.1|685863_686397_+|maleylpyruvate-isomerase-family-protein	unknown	unknown	gnl|CDD|371689
NC_009523.1|WP_011955322.1|678924_681096_+|methylmalonyl-CoA-mutase	unknown	unknown	gnl|CDD|376584
NC_009523.1|WP_041332854.1|685644_685836_+|DUF2283-domain-containing-protein	unknown	unknown	gnl|CDD|235971
NC_009523.1|WP_011955330.1|687822_688077_+|ferrous-iron-transport-protein-A	unknown	unknown	gnl|CDD|377199
NC_009523.1|WP_011955337.1|696949_698011_+|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	unknown	unknown	gnl|CDD|376752
NC_009523.1|WP_011955332.1|688317_688848_+|iron-transporter-FeoB	unknown	unknown	gnl|CDD|376781
NC_009523.1|WP_011955336.1|692361_696723_+|cobaltochelatase-subunit-CobN	unknown	unknown	gnl|CDD|235663
NC_009523.1|WP_011955333.1|688847_690581_+|ferrous-iron-transport-protein-B	unknown	unknown	gnl|CDD|223447

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955326.1|685193_685538_+|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	9.98844e-41
NC_009523.1|WP_011955321.1|678065_678542_-|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl|CDD|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	9.68257e-94
NC_009523.1|WP_011955335.1|691586_692267_+|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl|CDD|376827	pfam02572, CobA_CobO_BtuR, ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin adenosyltransferase, EC:2.5.1.17, involved in cobalamin (vitamin B12) biosynthesis. These enzymes catalyze the adenosylation reaction: ATP + cob(I)alamin + H2O <=> phosphate + diphosphate + adenosylcobalamin.	4.35956e-91
NC_009523.1|WP_157041237.1|688069_688321_+|ferrous-iron-transport-protein-A	gnl|CDD|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	2.00074e-10
NC_009523.1|WP_011955324.1|683311_684448_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	gnl|CDD|236515	PRK09435, PRK09435, methylmalonyl Co-A mutase-associated GTPase MeaB.	0
NC_009523.1|WP_011955339.1|698897_699194_+|energy-coupling-factor-ABC-transporter-substrate-binding-protein	gnl|CDD|179494	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein.	1.07711e-41
NC_009523.1|WP_041334684.1|684913_685204_+|nucleotidyltransferase-family-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	1.0583e-30
NC_009523.1|WP_041332858.1|686465_687230_+|metal-dependent-transcriptional-regulator	gnl|CDD|224240	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription].	1.58787e-30
NC_009523.1|WP_011955323.1|681092_683315_+|methylmalonyl-CoA-mutase	gnl|CDD|236508	PRK09426, PRK09426, methylmalonyl-CoA mutase; Reviewed.	0
NC_009523.1|WP_011955334.1|690734_690989_+|hypothetical-protein	gnl|CDD|370243	pfam09012, FeoC, FeoC like transcriptional regulator. This family contains several transcriptional regulators, including FeoC, which contain a HTH motif. FeoC acts as a [Fe-S] dependant transcriptional repressor.	3.03825e-19
NC_009523.1|WP_011955338.1|698151_698901_+|energy-coupling-factor-ABC-transporter-permease	gnl|CDD|181384	PRK08319, PRK08319, energy-coupling factor ABC transporter permease.	3.16431e-118
NC_009523.1|WP_011955327.1|685863_686397_+|maleylpyruvate-isomerase-family-protein	gnl|CDD|371689	pfam11716, MDMPI_N, Mycothiol maleylpyruvate isomerase N-terminal domain.	2.96291e-10
NC_009523.1|WP_011955322.1|678924_681096_+|methylmalonyl-CoA-mutase	gnl|CDD|376584	pfam01642, MM_CoA_mutase, Methylmalonyl-CoA mutase. The enzyme methylmalonyl-CoA mutase is a member of a class of enzymes that uses coenzyme B12 (adenosylcobalamin) as a cofactor. The enzyme induces the formation of an adenosyl radical from the cofactor. This radical then initiates a free-radical rearrangement of its substrate, succinyl-CoA, to methylmalonyl-CoA.	0
NC_009523.1|WP_041332854.1|685644_685836_+|DUF2283-domain-containing-protein	gnl|CDD|235971	PRK07219, PRK07219, DNA topoisomerase I; Validated.	0.00018691
NC_009523.1|WP_011955330.1|687822_688077_+|ferrous-iron-transport-protein-A	gnl|CDD|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	2.71169e-21
NC_009523.1|WP_011955337.1|696949_698011_+|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	gnl|CDD|376752	pfam02277, DBI_PRT, Phosphoribosyltransferase. This family of proteins represent the nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) enzymes involved in dimethylbenzimidazole synthesis. This function is essential to de novo cobalamin (vitamin B12) production in bacteria. Nicotinate mononucleotide (NaMN):5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase (CobT) from Salmonella enterica plays a central role in the synthesis of alpha-ribazole-5'-phosphate, an intermediate for the lower ligand of cobalamin.	2.15808e-176
NC_009523.1|WP_011955332.1|688317_688848_+|iron-transporter-FeoB	gnl|CDD|376781	pfam02421, FeoB_N, Ferrous iron transport protein B. Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N-terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.	1.35234e-88
NC_009523.1|WP_011955336.1|692361_696723_+|cobaltochelatase-subunit-CobN	gnl|CDD|235663	PRK05989, cobN, cobaltochelatase subunit CobN; Reviewed.	0
NC_009523.1|WP_011955333.1|688847_690581_+|ferrous-iron-transport-protein-B	gnl|CDD|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	4.65072e-172

Protein sequences

>NC_009523.1|WP_041332858.1|686465_687230_+|metal-dependent-transcriptional-regulator
MSESVEMYLVMTALLRSAPDQPVPLSLLANKLGVSQVSANEMCHRLEERGLLAYQPYKGVTLTPDGEEWAQRILSRRRLWVIFLVENLGIDPEEADDLACQLEHITSDRLVAALKAFLERAPNARAPLEPVSSSASLRPLTACTAGTRGVIAAVDVEPAAATFLARQGIAPGADAEVLAVGADHAVLLQIGTQQVALAPSLANRITLDDNAALHAARHAAWQRCSAFWSCVRGEPHVCPINDSLESSPSIPATP
>NC_009523.1|WP_011955327.1|685863_686397_+|maleylpyruvate-isomerase-family-protein
MAARQEKETCDMSPSMKRHILAALREQFEQWDTVLARLSDGESAAPLPSSSWTIKDVVAHLWAWQQRTIARMEAALADREPVFPQWSTDIDLATEDGVDRLNARIYATHRDHSWSSVYRQWREGFLHLLDISERVNEQNLLDPSRYSWLDGRPLALILLTTYDHHQEHGEALGIGYS
>NC_009523.1|WP_041332854.1|685644_685836_+|DUF2283-domain-containing-protein
MGSNLSCRNVSIDSIQTNAEGIAADYDQEGRLAGIEILDALKRFGDPNILRRIVLEDIGLIRA
>NC_009523.1|WP_011955326.1|685193_685538_+|DUF86-domain-containing-protein
MSRDPRLYLDDIRESCEKIVRYSQGLDLNQFVQDEKTFDAIVRNLEIIGEAAKRIPPQMRARYPDVEWNKIAGLRDIVAHEYFGLDEDILWDVVQNRIPVLLDRTRQILAAEGG
>NC_009523.1|WP_041334684.1|684913_685204_+|nucleotidyltransferase-family-protein
MKKEEVIRRLTDHRQELAQFGIKSLALFGSVVRDEARPTSDVDLLVEFEGQATFDRYMNLKFYLEQVLGCRVDLVTRKALKPRLRPVVEAEALYVT
>NC_009523.1|WP_157040945.1|684554_684818_+|hypothetical-protein
MKTITLQVPDEVYEACLHMAQKYGRSAEEWVMEFLLKHAPGSLQRSDDEQRKAARERLRPYAGAQSLGYPTGVDNESIDTRTQQGLL
>NC_009523.1|WP_011955324.1|683311_684448_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB
MSNGQHSASSEEMPFALSVVEGVTGGHDGLPGQQVSAPAAPPPRRRLLTVEEYVTGVRSGDRSILARAITLIESNAPAHMALAQEVLRELLPYTGGALRVGITGVPGVGKSTFIEALGTMLCDRGHRVAVLAVDPSSSISRGSILGDKTRMERLARHPNAYIRPSPTGGSLGGVARKSRETLLVCEAAGFDIILVETVGVGQSEIAVRGMVDFFLLLMLAGAGDELQGIKKGIIELADALLITKADGDNRTRALAAQAEYTHALRYLTPATEGWRPRAYICSAQTGEGIAEIWREIERFRDETTASGVFAARRRDQARDWVYTLIEDHLRTRFFGHPVVQERLPAIEKAVVEGTLPVTTAVQDLIRAFESALQGEEQG
>NC_009523.1|WP_011955323.1|681092_683315_+|methylmalonyl-CoA-mutase
MKTPDFTTLPYRDGAAAPDREQWRERAEREAGRPLDTLVWRTMEQLDIRPLYTAEDIAGLEHLRFTAGIPPYLRGPYPTMYVTQPWTIRQYAGFSTAEASNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVLDMKILFDGIPLDQMSVSMTMNGAVIPIMAFYIVAAEEQGVRQDQLTGTIQNDILKEYMVRNTYIYPPEPSMRIIADIFAYTAKHMPKFNSISISGYHMQEAGATADLELAYTLADGLEYVRAGLKAGLSIDAFAPRISFFWAIGMNYFMEIAKMRAARMLWAKIIRQFDPKDPKSMALRTHCQTSGWSLTEQDPFNNVARTCIEAMAAALGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQEETGICKIIDPWGGSYYLEYLTDALARRAWMHIQEVEELGGMAKAIEAGLPKLRIEEAAARRQAHIDSGRETIVGVNKYRLPYEAPIEILEVDNTAVRLAQIERLKKLRAERDESRTQAALDALTRVAATGEGNLLEAAVEAARARATLGEISMAMEKVFGRYKATIRSVSGVYSSEFSDVEQIHHVRALADAFAAREGRRPRILVAKIGQDGHDRGAKVVATAFADLGFDVDIGSLFQTPEEVARQAVENDVHVVGVSSLAAGHKTLLPQLVEELRKLGREDIMVVIGGIIPAQDYDFLRAHGAAMIFGPGTIIPVAAEKLLHELERRLHGDGVETGPTVQTRDAA
>NC_009523.1|WP_011955322.1|678924_681096_+|methylmalonyl-CoA-mutase
MSEEAQTTAAGDTAVHPLFDMFPPATYEEWRAVAEKTLKGAPFEKRLITKTYENILLQPIYNIEDIAGLPQVNSLPGFEPFVRSTRALGYVIARWEVCQELPYPLPREVNEAARSDLSRGLTSLNLPLDQATLQGLDPDAAPMALVGAGGVSLATVDDAVTLLEGVTLDRTPLLVAAGANAVPVAALILAAAERSGVGFDRIGGCIGADPLGALAVQGSLPLSLERSYDLMAQWTAWAHVHAPLLRTILVATHVYHNGGASVVQDLACALATGVAYIRAMQARGLDVHVVAPRMQFAFSIGSQFFMEIARLRAARMLWARVVSAFGGDEQAQKMRIHGRTSAWTKARFDAYNNMLRATGEAMAGVMGGIDSLHVSHFDEALGLPDEFSRRIARNVQIILQEECNFIRVIDPPGGAWAIETLTDQVAQKAWALFQEIERKGGMADALVAGFPQSFVAATRAERFSAIAHRREVIVGVNMYPNLKEKPLTVRMVDHAAVQAERSAEVQRVRHAVDPQARQDALGALTQTLAAAPDRLVERAIAAARIGATLGDLATALASSDAAGPTIEPIPFHRAAEQFETLRTTAEAYMARTGARPKVFLANMGPIPQHKARADFSTGFFEAGGFEVIGNSGFATVEEAAQAALESGAGIVTICSTDETYPEIVPALTGLIKSSRPDVTVVLAGYPTDQIETYRAAGVDEFIHLRANCYETLVRLQQLKGVAA
>NC_009523.1|WP_011955321.1|678065_678542_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSDLTHLDESGRARMVDVGAKDDTLREAVARGEVRMRPETLQRLAAGDMPKGDVLATARIAGIMAAKRAPDLIPLCHPLLLTHVAVDARLDVATSTVQIEATVRTVGKTGVEMEALTAVSVAALTIYDMCKAIDREMQIGAIRLVRKSGGRSGDFVND
>NC_009523.1|WP_011955330.1|687822_688077_+|ferrous-iron-transport-protein-A
MSDGTSVTLDQLPRGRSAIIVRIGGDRALRRRLLDMGLVHGETVTLTGLAPLGDPLELTVKGYHLSLRKSDARCIQVEPINATA
>NC_009523.1|WP_157041237.1|688069_688321_+|ferrous-iron-transport-protein-A
MHNHSIPLMFVGQGVRARLVGINGSQRTAHRLAELGFIPGVEVSVVADSGSALMVAVGDTRMALGYPLAQALLVAVLEKGSSR
>NC_009523.1|WP_011955332.1|688317_688848_+|iron-transporter-FeoB
MKDVIVALAGNPNVGKSTIFNALTGLRQHVGNWPGKTVERKEGQLALDGRVVTIVDLPGAYSLAARSLEEQIARDFIVRDCPDLVINVVDAANLERNLYLTTQLLETGARLLVALNMIDVAAARGMTLNPDALARGLGVPVVSLVASKNEGVAALKAAMTTLIEGLEVRQTVRKVA
>NC_009523.1|WP_011955333.1|688847_690581_+|ferrous-iron-transport-protein-B
MTTVEMFINQAPFRYPSPIETELNHLAELFAQTPALAVYPSRWLAIQALEGDESLLNDIRELGGPAVAAALDASLERLHAIYGDDLDVALVDQRYRFVHTIATQAVRRPVEAPVTLSDRIDRVVTHRWLGIPIFLAVMWVVFKLTTDVAAPFVDWLDGVLSGPVSRWTVALLAMVGADGGWVESLLVDGVIAGVGGVLAFVPVLLSLYFALALLEDSGYMARAAFVMDRLMRALGLHGKSFLPMIVGFGCSVPAIYATRTLDSRRDRILTGLLVPFMSCSARLPVYVLIAMVFFPASAGQVIFGLYLTGIVVAVGMGALLRQTLFRREPQAPFVLELPPYRMPTLRGVWRQMWERTSSFVRKAGTIILATSIVVWLLLAMPIGEGSFAETPVDQSAFAAVANAATPVFAPLGFGRWETSGALVTGLIAKEVVVGTLMQVYGGAVEEDGAPGDEPATLADDLSGIVNSFGAAVADALRALPGIVGINLVEAEEEPVAEGLAAAIRTGFAASSGGHSTLAALAFLVFVLLYTPCVAALAANRHEFGTPWMLVSLLGQFAIAWLAAFLVFQGGVLLGMQG
>NC_009523.1|WP_011955334.1|690734_690989_+|hypothetical-protein
MLYQILEALEAANGPVSLDELSRQLQIEPGALEGMIAFWVRKGRLKDTAVSGCAGSRRGCTCGAYPKGCVFSTAGPRVIVLNDS
>NC_009523.1|WP_011955335.1|691586_692267_+|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MTSEEHLSQQTPEAANDASNGDEQTDTSTGAAQSPGSTPEAQERREAARANRVQKGLVIVNTGNGKGKTTAALGILLRAWGRDMRVGGIQFLKHENANYGELRALKRMGIELTPMGDGFTWTSRDLDETQAKAVHGWETAKARIVSGAYDIFLLDEFTYVLNYGWVDTTDVIDWLRQHKPPMLHLIITGRNAPQALIDFADLVTEMREVKHPFRDQGIRAQKGVEY
>NC_009523.1|WP_011955336.1|692361_696723_+|cobaltochelatase-subunit-CobN
MAERLKRNMVQRIDGRMVNAGARRGMLIVCATGCCCGHTERGFAPVPTWRYHHEWERRKLRNQVHLSQGGCLGPCPLANVALLILDGRPYWFHSLNDEALVPVLYDYIEALLAADHDLAPPPALAPLMFNGFAWDGGGSLTQRHEPLPAMIGDGILVLSQADTDLLALEQARALLPDGFAPLRAAHVGRLADDTAVDRLLREALPGVAVVVARLHSASAFAYGLERLQEWAATTGGFLLCIPAVEALDPDLMARSTVGVPLALLVSAYFQYGGPANLASGLQCLSDHLLLSGWGYEAPVELPMHGVYTPTLSSCCADAPDDKRPVAGVLFYRAHLLSGNTAFIDTLITALHNQGMRVCAVYTQSLKDAAGGRGPEALRALTDAGPVDVVISTLSFALGETDPHPFATLDVPVIQALVSSTSRDEWLRNGRGLGPLDTAMNVAIPEFDGRIIGVPVAFKEQQGEAPARSVADEERMERLAGLARRLARLRHKPNAEKRIAFIFTNSSAKAQRIGNAVGLDAPASLMRILRAMQAAGYRTGDPPDSGDRLIADLIARCSYDETWLTTEQLIRAYRIPGAQYARWFADLPGALQDAMIRQWGQPPGAAYVHNGDLALAGLEYGNVFVALQPPRGYDMDPNAIYHRPDLPPPHNYYALYRWLRDEWQADAIVHLGKHGTLEWLPGKGVGLSATCFPDQFLGDLPLIYPFIINDPGEGTQAKRRAHAVIVDHLTPPMTSAGAYGDLVELAHLVDEYYRTEHLDPGKLPLLQRQIWEVLQRSHLDDDLRYIAQADHGDHRHEWDGSFLEDGTPTMLAEMEGREVAHLLEDIEGYLCELTGAQIRDGLHILGEMPAGEQLVELIYHLLRLPNLDAPSLPESVAAALGEDWNALRERPGARRERIEGASEDGAGAVFQTNADVIAHIEALSKELLRRLEALDWHSEAIERVIANIDRYSSSCRGAETPGYTMQSPPARAIPDLGTHYSGQPGARIAAALRYACDTLVPNLRRSAHDEIAHLLAALEGRFVPPGPGGAPTRGMAHVLPTGRNFYGVDPRALPSVAAWQTGEGLARDLIARYQREYGQIPESVGLSIWGTSAIRTAGDDLAQALALLGVRPRWQRENRRVVGIDIIPLEELGRPRVDVVCRISGFFRDAFPHLIALIDQAVQAVIALDEPPEMNFPRKHALETAQALQSAGKTVEEAQREAAYRIFSSKPGSYGAGILPLIDAQNWERDTDFARVYLAWGGYAYTACEQGTPAETAFAAALSKVQVATKNQDTREHDIFDSDDYLQFHGGMIATIRALTGKNPARYFGDSSDPARPRTRDLREEARRVFRARVTNPKWIASMQRHGYKGGLELAATVDYLFGYDATAEVLDDWMYEQVTERYLRDPGVQQWLEQVNPWALQAMAERLYEAIGRGMWANPSPEACATLEALLEQGDAWREGVERGSVERGGVER
>NC_009523.1|WP_011955337.1|696949_698011_+|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase
MSLLSETIARIGPLDDAAAAAAQARQDVLTKPQGALGRLEALSVQIAGITGNQRPRLTNPAVIVMAADHGVARRGVSAYPSEVTAQMVLNFLNGGAAINVLARHVGARVIVVDMGVAANLPSHPELINRKMGMGTADFSVEPAMSRTQAQQAVEAGIACANDAIDAGVDILATGDMGIGNTTASSAVVAAITGRPVADVTGRGAGVDDAGLARKIAVIEQALALHRPDPNDGLDVLAKVGGFEIGGLAGVMLGAAARRVPVVIDGFISGAAALIAWTLAPAVQPYLIAAHRSVERGHEAVFTRLDLVPLFDLGMRLGEGTGAVLGMSLCQAACKILDEMATFGEAGVSGKVEN
>NC_009523.1|WP_011955338.1|698151_698901_+|energy-coupling-factor-ABC-transporter-permease
MKPLHRWLPVVIGAALLIIFESRAAYAMHIMEGFLPPVWAGFWFIVVLPFWVLGLRRINRLIAGKPETRLLLGFAAAFAFVLSALKIPSVTGSSSHPTGTGLGTILFGPLVMSVLGSIVLLFQALLIAHGGLTTLGANAFSMAVVGPFVAWLIWKGLKDRAPIWLTVFLAAALADLFTYVVTSAQLALAYPDAVGGFAASFARFGAIFAVTQIPLAISEGILTVLIFNALQANAQTELQSLGVLKGAQA
>NC_009523.1|WP_011955339.1|698897_699194_+|energy-coupling-factor-ABC-transporter-substrate-binding-protein
MSSKPFGWTTSLILLLVVVVLAIVPLLMVRDSEFEGADAIAETAITEVAPDYEPWFAPIFEPPGGETESLLFALQAGLGAGLIGYFFGLKHGERRRRD

Crispr_ID: NC_009523_8

• CRISPR_ID: NC_009523_8
• CRISPR_location: 796948-798073
• CRISPR_type: TypeI-E
• Repeat_type: I-B,III-A,III-B
• Spacer_info: 18 spacers
• Cas_protein_info: cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL

Consensus repeat of NC_009523_8

Consensus_repeat	Method
CGGTTCACCCCCACGGGCGTGGGGACAAT	CRISPRCasFinder
CGGTTCACCCCCACGGGCGTGGGGACAAT	CRT
CGGTTCACCCCCACGGGCGTGGGGACAAT	PILER-CR

spacers of NC_009523_8

>8.1|796977|32|NC_009523|CRISPRCasFinder,CRT
GCAACGACACATCGTTTGAGAAAGACTACATC
>8.2|797038|32|NC_009523|CRISPRCasFinder,CRT
CGCGCCTGGCGCGATCGTGCACACTGCGGAAA
>8.3|797099|33|NC_009523|CRISPRCasFinder,CRT
GGCGTGCCGACTAGGTGTGACGCTCGCTGCTCG
>8.4|797161|32|NC_009523|CRISPRCasFinder,CRT
TCGCGCACGCGATGACAGGCCGGACTAGCATG
>8.5|797222|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CTGACCGCTATCGACGTGCTGATGATTGCGCA
>8.6|797283|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ACCAGGGCATCCCAGCAGGCGGGTCTATCACA
>8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CTGACCGCTATCGACGCGCTGATGATTGCGCA
>8.8|797405|31|NC_009523|CRISPRCasFinder,CRT,PILER-CR
TGGCGTTTCAGCCAGTTCCTGATACGGCTCG
>8.9|797465|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
GTTCCGCAACCGCTGTCACAACACACGCTTCT
>8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
TACACCACCAGCAGAACGTTGCCGACGACGCG
>8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ATCGAACCGCCGGAGCGCAGCGACCAACCGCG
>8.12|797648|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CGGTTTTCCGGCAATGCGCCATAAAAACGCCG
>8.13|797709|31|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ATAGCCTGCACGTGCAGGCTATAACGAAAAC
>8.14|797769|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
AAACGCCATAGCACACCCCCACCACTACAAGA
>8.15|797830|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
GTTTGGAGCGCTATCAGCATATAGTGAAATGC
>8.16|797891|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CAGGTCATGCATATACCGCTCATCCCTGCTGG
>8.17|797952|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CAGTGCTCCTTCTGCGTTACACATCTCACTGG
>8.18|798013|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR
GCTGCGAGTTTGGCGCTGGAGGTGTTCGCTTA

CRISPR arrays and Neighbor proteins around NC_009523_8

CRISPR arrays

The CRISPR arrays of NC_009523_8

>merge|NC_009523|8|796948-798073|CRISPRCasFinder,CRT,PILER-CR
CGGTTCACCCCCACGGGCGTGGGGACAATGCAACGACACATCGTTTGAGAAAGACTACATCCGGTTCACCCCCACGGGCGTGGGGACAATCGCGCCTGGCGCGATCGTGCACACTGCGGAAACGGTTCACCCCCACGGGCGTGGGGACAATGGCGTGCCGACTAGGTGTGACGCTCGCTGCTCGCGGTTCACCCCCACGGGCGTGGGGACAATTCGCGCACGCGATGACAGGCCGGACTAGCATGCGGTTCACCCCCACGGGCGTGGGGACAATCTGACCGCTATCGACGTGCTGATGATTGCGCACGGTTCACCCCCACGGGCGTGGGGACAATACCAGGGCATCCCAGCAGGCGGGTCTATCACACGGTTCACCCCCACGGGCGTGGGGACAATCTGACCGCTATCGACGCGCTGATGATTGCGCACGGTTCACCCCCACGGGCGTGGGGACAATTGGCGTTTCAGCCAGTTCCTGATACGGCTCGCGGTTCACCCCCACGGGCGTGGGGACAATGTTCCGCAACCGCTGTCACAACACACGCTTCTCGGTTCACCCCCACGGGCGTGGGGACAATTACACCACCAGCAGAACGTTGCCGACGACGCGCGGTTCACCCCCACGGGCGTGGGGACAATATCGAACCGCCGGAGCGCAGCGACCAACCGCGCGGTTCACCCCCACGGGCGTGGGGACAATCGGTTTTCCGGCAATGCGCCATAAAAACGCCGCGGTTCACCCCCACGGGCGTGGGGACAATATAGCCTGCACGTGCAGGCTATAACGAAAACTGGTTCACCCCCACGGGCGTGGGGACAATAAACGCCATAGCACACCCCCACCACTACAAGACGGTTCACCCCCACGGGCGTGGGGACAATGTTTGGAGCGCTATCAGCATATAGTGAAATGCCGGTTCACCCCCACGGGCGTGGGGACAATCAGGTCATGCATATACCGCTCATCCCTGCTGGCGGTTCACCCCCACGGGCGTGGGGACAATCAGTGCTCCTTCTGCGTTACACATCTCACTGGCGGTTCACCCCCACGGGCGTGGGGACAATGCTGCGAGTTTGGCGCTGGAGGTGTTCGCTTACGGTTCACCCCCACGGGCGTGGGGACAAT

>NC_009523|8|7|796948-798073|CRISPRCasFinder
CGGTTCACCCCCACGGGCGTGGGGACAAT	GCAACGACACATCGTTTGAGAAAGACTACATC
CGGTTCACCCCCACGGGCGTGGGGACAAT	CGCGCCTGGCGCGATCGTGCACACTGCGGAAA
CGGTTCACCCCCACGGGCGTGGGGACAAT	GGCGTGCCGACTAGGTGTGACGCTCGCTGCTCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	TCGCGCACGCGATGACAGGCCGGACTAGCATG
CGGTTCACCCCCACGGGCGTGGGGACAAT	CTGACCGCTATCGACGTGCTGATGATTGCGCA
CGGTTCACCCCCACGGGCGTGGGGACAAT	ACCAGGGCATCCCAGCAGGCGGGTCTATCACA
CGGTTCACCCCCACGGGCGTGGGGACAAT	CTGACCGCTATCGACGCGCTGATGATTGCGCA
CGGTTCACCCCCACGGGCGTGGGGACAAT	TGGCGTTTCAGCCAGTTCCTGATACGGCTCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	GTTCCGCAACCGCTGTCACAACACACGCTTCT
CGGTTCACCCCCACGGGCGTGGGGACAAT	TACACCACCAGCAGAACGTTGCCGACGACGCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	ATCGAACCGCCGGAGCGCAGCGACCAACCGCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	CGGTTTTCCGGCAATGCGCCATAAAAACGCCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	ATAGCCTGCACGTGCAGGCTATAACGAAAAC
TGGTTCACCCCCACGGGCGTGGGGACAAT	AAACGCCATAGCACACCCCCACCACTACAAGA
CGGTTCACCCCCACGGGCGTGGGGACAAT	GTTTGGAGCGCTATCAGCATATAGTGAAATGC
CGGTTCACCCCCACGGGCGTGGGGACAAT	CAGGTCATGCATATACCGCTCATCCCTGCTGG
CGGTTCACCCCCACGGGCGTGGGGACAAT	CAGTGCTCCTTCTGCGTTACACATCTCACTGG
CGGTTCACCCCCACGGGCGTGGGGACAAT	GCTGCGAGTTTGGCGCTGGAGGTGTTCGCTTA
CGGTTCACCCCCACGGGCGTGGGGACAAT

>NC_009523|8|2|796948-798073|CRT
CGGTTCACCCCCACGGGCGTGGGGACAAT	GCAACGACACATCGTTTGAGAAAGACTACATC
CGGTTCACCCCCACGGGCGTGGGGACAAT	CGCGCCTGGCGCGATCGTGCACACTGCGGAAA
CGGTTCACCCCCACGGGCGTGGGGACAAT	GGCGTGCCGACTAGGTGTGACGCTCGCTGCTCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	TCGCGCACGCGATGACAGGCCGGACTAGCATG
CGGTTCACCCCCACGGGCGTGGGGACAAT	CTGACCGCTATCGACGTGCTGATGATTGCGCA
CGGTTCACCCCCACGGGCGTGGGGACAAT	ACCAGGGCATCCCAGCAGGCGGGTCTATCACA
CGGTTCACCCCCACGGGCGTGGGGACAAT	CTGACCGCTATCGACGCGCTGATGATTGCGCA
CGGTTCACCCCCACGGGCGTGGGGACAAT	TGGCGTTTCAGCCAGTTCCTGATACGGCTCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	GTTCCGCAACCGCTGTCACAACACACGCTTCT
CGGTTCACCCCCACGGGCGTGGGGACAAT	TACACCACCAGCAGAACGTTGCCGACGACGCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	ATCGAACCGCCGGAGCGCAGCGACCAACCGCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	CGGTTTTCCGGCAATGCGCCATAAAAACGCCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	ATAGCCTGCACGTGCAGGCTATAACGAAAAC
TGGTTCACCCCCACGGGCGTGGGGACAAT	AAACGCCATAGCACACCCCCACCACTACAAGA
CGGTTCACCCCCACGGGCGTGGGGACAAT	GTTTGGAGCGCTATCAGCATATAGTGAAATGC
CGGTTCACCCCCACGGGCGTGGGGACAAT	CAGGTCATGCATATACCGCTCATCCCTGCTGG
CGGTTCACCCCCACGGGCGTGGGGACAAT	CAGTGCTCCTTCTGCGTTACACATCTCACTGG
CGGTTCACCCCCACGGGCGTGGGGACAAT	GCTGCGAGTTTGGCGCTGGAGGTGTTCGCTTA
CGGTTCACCCCCACGGGCGTGGGGACAAT

>NC_009523|8|1|797193-798073|PILER-CR
CGGTTCACCCCCACGGGCGTGGGGACAAT	CTGACCGCTATCGACGTGCTGATGATTGCGCA
CGGTTCACCCCCACGGGCGTGGGGACAAT	ACCAGGGCATCCCAGCAGGCGGGTCTATCACA
CGGTTCACCCCCACGGGCGTGGGGACAAT	CTGACCGCTATCGACGCGCTGATGATTGCGCA
CGGTTCACCCCCACGGGCGTGGGGACAAT	TGGCGTTTCAGCCAGTTCCTGATACGGCTCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	GTTCCGCAACCGCTGTCACAACACACGCTTCT
CGGTTCACCCCCACGGGCGTGGGGACAAT	TACACCACCAGCAGAACGTTGCCGACGACGCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	ATCGAACCGCCGGAGCGCAGCGACCAACCGCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	CGGTTTTCCGGCAATGCGCCATAAAAACGCCG
CGGTTCACCCCCACGGGCGTGGGGACAAT	ATAGCCTGCACGTGCAGGCTATAACGAAAAC
TGGTTCACCCCCACGGGCGTGGGGACAAT	AAACGCCATAGCACACCCCCACCACTACAAGA
CGGTTCACCCCCACGGGCGTGGGGACAAT	GTTTGGAGCGCTATCAGCATATAGTGAAATGC
CGGTTCACCCCCACGGGCGTGGGGACAAT	CAGGTCATGCATATACCGCTCATCCCTGCTGG
CGGTTCACCCCCACGGGCGTGGGGACAAT	CAGTGCTCCTTCTGCGTTACACATCTCACTGG
CGGTTCACCCCCACGGGCGTGGGGACAAT	GCTGCGAGTTTGGCGCTGGAGGTGTTCGCTTA
CGGTTCACCCCCACGGGCGTGGGGACAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157040953.1|788329_788521_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955420.1|798410_799358_-|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl|CDD|274693
NC_009523.1|WP_041332923.1|808234_808600_-|hypothetical-protein	unknown	unknown	gnl|CDD|197318
NC_009523.1|WP_011955418.1|795673_796090_-|DUF3592-domain-containing-protein	unknown	unknown	gnl|CDD|378822
NC_009523.1|WP_085979421.1|787047_788105_-|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011955424.1|802230_802734_-|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl|CDD|187862
NC_009523.1|WP_157040952.1|785779_787093_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955417.1|794488_795544_-|proline-racemase	unknown	unknown	gnl|CDD|368491
NC_009523.1|WP_157040954.1|789640_790129_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_083763249.1|804300_807198_-|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl|CDD|182031
NC_009523.1|WP_011955423.1|800955_802164_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NC_009523.1|WP_011955415.1|790384_791074_-|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl|CDD|379084
NC_009523.1|WP_041332919.1|798138_798414_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl|CDD|378244
NC_009523.1|WP_011955427.1|807083_808082_-|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009523.1|WP_011955422.1|800170_800959_-|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	pfam09704_cas5_CAS-I	gnl|CDD|273842
NC_009523.1|WP_083763247.1|789187_789478_+|transposase	unknown	unknown	gnl|CDD|376573
NC_009523.1|WP_011955413.1|788652_788979_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955421.1|799452_800169_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl|CDD|187858
NC_009523.1|WP_011955425.1|802726_804304_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl|CDD|187860
NC_009523.1|WP_011955416.1|791446_794347_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|223533

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_083763249.1|804300_807198_-|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	5.8e-65	214.3	0.0
NC_009523.1|WP_011955423.1|800955_802164_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	6.2e-105	346.4	0.4
NC_009523.1|WP_041332919.1|798138_798414_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	3.2e-32	105.3	0.1
NC_009523.1|WP_011955420.1|798410_799358_-|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	4.8e-113	371.4	0.0
NC_009523.1|WP_011955427.1|807083_808082_-|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	7.7e-46	151.0	0.6
NC_009523.1|WP_011955422.1|800170_800959_-|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	pfam09704_cas5_CAS-I	2.6e-64	211.6	0.0
NC_009523.1|WP_011955424.1|802230_802734_-|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	4.6e-35	115.6	7.6
NC_009523.1|WP_011955425.1|802726_804304_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	1.7e-112	371.5	0.0
NC_009523.1|WP_011955421.1|799452_800169_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	1.4e-66	219.3	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955420.1|798410_799358_-|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.93826e-143
NC_009523.1|WP_041332923.1|808234_808600_-|hypothetical-protein	gnl|CDD|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	1.27334e-35
NC_009523.1|WP_011955418.1|795673_796090_-|DUF3592-domain-containing-protein	gnl|CDD|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	6.49996e-26
NC_009523.1|WP_085979421.1|787047_788105_-|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011955424.1|802230_802734_-|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl|CDD|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.51444e-29
NC_009523.1|WP_011955422.1|800170_800959_-|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl|CDD|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	7.64186e-45
NC_009523.1|WP_011955417.1|794488_795544_-|proline-racemase	gnl|CDD|368491	pfam05544, Pro_racemase, Proline racemase. This family consists of proline racemase (EC 5.1.1.4) proteins which catalyze the interconversion of L- and D-proline in bacteria. This family also contains several similar eukaryotic proteins including Trypanosoma cruzi PA45-A, a protein with B-cell mitogenic properties which has been characterized as a co-factor-independent proline racemase.	2.0893e-138
NC_009523.1|WP_011955421.1|799452_800169_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.44164e-68
NC_009523.1|WP_083763249.1|804300_807198_-|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.7177e-109
NC_009523.1|WP_011955423.1|800955_802164_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.97153e-120
NC_009523.1|WP_011955415.1|790384_791074_-|zinc-ribbon-domain-containing-protein	gnl|CDD|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	0.00175275
NC_009523.1|WP_041332919.1|798138_798414_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl|CDD|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	9.0903e-40
NC_009523.1|WP_011955427.1|807083_808082_-|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	3.95502e-40
NC_009523.1|WP_083763247.1|789187_789478_+|transposase	gnl|CDD|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	0.000290441
NC_009523.1|WP_011955425.1|802726_804304_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	3.85426e-122
NC_009523.1|WP_011955416.1|791446_794347_+|tetratricopeptide-repeat-protein	gnl|CDD|223533	COG0457, NrfG, FOG: TPR repeat [General function prediction only].	6.18637e-11

Protein sequences

>NC_009523.1|WP_011955418.1|795673_796090_-|DUF3592-domain-containing-protein
MTGLHYMALFLLLMGGGFLVGAGYLFWQSRPFQHGMECSATVIDIASRHDEDGRSELYAPVVRFVAHNGREVTITGAVFSRPCSYEIGQTVTVEYPARAPEQGRIKGEDRFMRTVFGITGGVITAIGLIVGVIAFSNG
>NC_009523.1|WP_011955417.1|794488_795544_-|proline-racemase
MNLDWDRISLPPKTLRLTTIEAHTAGEPLRIITGGLPEIPGATMLERRRCMRDHFDHVRQALMWEPRGHYNMYGCIITPPVSADADFGVLFMHNEGYSTMCGHGVIALVTVLVESGVAPVEGQQATVTLDTPAGLVRATAHIEDGSVARVSFLNVPSFVYARDLQVTVPGYGHIVCDIAWGGAFYAVLPASQVGLRVEPKQTAALVAAGEAIKRAVNAVLPIHHPCESDLGFLYGTILTDQPEDATHHSRNICVFANAEVDRSPTGTGVSARLAIHHAKGEIETGQSIVIESILGRRSTFVGRVVAHTQVGSYPAIIPEVSGRAFVTGRSEFVLDPRDPLGSGFLVEQIGS
>NC_009523.1|WP_011955416.1|791446_794347_+|tetratricopeptide-repeat-protein
MPDHRRLAILTRLRKAARVTLAQMARACGLEGSRAYESVSAWERGEAVPRAAVRTAFLGYLAHTLNLADDRETLAAVWETLVHEWGWEPLQPADWQLLDSGQLLASATPGRYQLTRSDSTSTGAPLPAHLSPAPVPLPPGSRAPFAPNPHFVGRAAELLTIAGHLHRRTAPIHIVVCGPGGIGKTQLAIEIVHRCGHAFPGGVFWLGCADPAAVPAAIAACGGQDGLRLRPDFDRLSLDEQVRLVLAAWHEETLRLLVFDSCEDPALLRRWLPRRGGCRALITSQRRTWDADLPVATLPLGLLSRAESLALLRRYCPTPQISDAELIAIAAELDDLPLALHLAGSHLARGADTLTPTCYLAELRARLDQHPSLAGVDPRGRPLPAPTGHHNRLEQVVALSLSRLDPGGVIDALACQLLLRAAWFAPGEPIPGALLSATLAPRPDPALLAGALQRLVDIGLLLDSAGAYSGRLHRLIAAFLRRLDNDGAAQHAVETALLAHARMLNAALDQPALLRIQAHLRAVTDAALVRGDAIAADLSYELSRHLGEIDQYAAAIAYNQRSLDLRNQIFGADSVASSANLHFHGMMLDWLGDYPGARPYHERALAIRRARLGPDHPDTATSVLHAGEIAHAVCDYAQARTYYEQALAARIRHDGPDSPGAAELYNNLGLLLNAMGEFDAALPYAERAVAIWEAHEQPNRSLQSMAINNLGYLHRARGEYRQALPLLRRALAIREEVYGPMHSFVGVTRNHIGRVYHYQGRFEQAGAELEATLRLFDAAIGREHPITACALSNLGMLALEMGDRAGARRMLEAALDIHRRILGAAHRHTAREMNRLGLLHQAFGDRAMATRYLRAALAVRRRILGDLHHDTANTLGHLGVLLLSAGRPRQARPLLAAALRRHLARLGERHPYTARSLLRMGQVCAALGEREISRDYLSRALAVYTAVLGADHPYTLAARQAQVTAC
>NC_009523.1|WP_011955415.1|790384_791074_-|zinc-ribbon-domain-containing-protein
MPGYDAEGTMNRCKACDADLSAEARFCMVCGAPVSTGDGSAAMVTRSAPPQGELVTAGAVQPARAIVQPQGLVRTMLLASFALIFLFFSPFVSCANRTFTGVEAFQASLPSQYEEPKDGIFLILFPIAGIAGVLVSFLAHERISAGQSLRSVRGFAIGGLLSGLIALCPVGIGIYDTGRSEGVLNLLWGFWLSAAATIVLGGASLLLLVTPEPVTDSSPPQASGQPEGP
>NC_009523.1|WP_157040954.1|789640_790129_-|hypothetical-protein
MIRETAVGDAVQEPAAPGQALSATTTAVVVKRQSSGLLRILLLITVVLTVLIALAFISVINTGARSAIIGRWQADLGYVMLWGNVTENLEFFPNGSVTSNREIAVFTGRYQWLDDQTLRIDWREQGIFGHSVSEIWRVKVSGDTMVVVNTLSGTTTEYRRVP
>NC_009523.1|WP_083763247.1|789187_789478_+|transposase
MLNEGHGVPIGVAIDGANRHDMKLAPATIERIVVERPAPTEERPQGMCLDKGYDDEEVRATVREVGLTAHMRSRGEEARDIAHEAGKRARRWAVPC
>NC_009523.1|WP_011955413.1|788652_788979_-|hypothetical-protein
MNNSDFGYTLIHCMIVLWVGSALAGMIWIGRKGYFTGITWNVGCPLFVLFGWWAILLLLILGPIWLLIAAFLKPKQRCPHCKEIIPGDASRCSFCQGEVTPVSSPEIH
>NC_009523.1|WP_157040953.1|788329_788521_-|hypothetical-protein
MPKRERRFYPTHDATDLTDAQWVTSAPLVTAASPKVRRLTDVDRRMDKGERFSSDTGVRERAI
>NC_009523.1|WP_085979421.1|787047_788105_-|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_157040952.1|785779_787093_-|hypothetical-protein
MAETQKAVQKSKRILMKSINEQLAVQREIATAQANPVQSGPTATIVAERIAQLVSTQEALEIARRQIEATQTAIIRHGVNTGGSTPQPTSQTTPTVPSQASIATPNPGQTPELVRCPQRIDFGLTIQCSIDAASEIDTYTFDAQADDRVMLRMARASETLQPWIRVFAPDKAQVCESYAERLADLLDCHLPRSGTYSIQVADSSRERKETGNYTLYLQRLNNPGITLPIAFGQPLSGSIGRPTQIDTYSFEANVDDRILIRMLRASETVQPWIRVYAPDGRLTCEAYAERFVEKTDCIIPRTGLYTVLASDASRARTETGNYTLYIQRLNNPGRATLISPGQALSGTIASPAEIHTYTFEGRADDKVVLRMNRTSETIQPWMRVYAPNGVLTCEGYSERQAEAYCTLPRSGTYTLLVADASRAGTETGAYSLSLTRP
>NC_009523.1|WP_041332919.1|798138_798414_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MTVIILERVPVGVRGELTRWMLEIHTGVFVGTLSARVRDLLWDQVCQHMRDGAGFLVYQTNTEQGFALRSCGPTNRQLIQVEGLFLVRIPS
>NC_009523.1|WP_011955420.1|798410_799358_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MPVHNLQILPKVSDSWTYLYVEHAIIEQDDKAIAILNKEGKTPVPCATLSLLMLGPGISITHQAIKTLAENGCMVAWVGEEGVRFYAVGMGETRSAANTLRQAAMHSDPDLRLRIVRRMYEMRFPEKLDPGLTIKQIRGKEGARVRDTYARWSRETGVKWDGRFYKQNDWRRTEPINRAISAANSCLYGIVHAAIVAAGYSPALGFIHTGKMLSFVYDVADLYKTDIAIPAAFRCTAAGESRLESRVRHLCRDLIREQRMLERIVDDLHRIFDISTLDQRESELFDRYYARPGNLWDPEEGEVAGGINYSEEEVS
>NC_009523.1|WP_011955421.1|799452_800169_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRLILDVRQPRVRRDLSDVYRLHRTILSAFPQAPDNVPARAHFGILYRIEPISDMPWLVRLLVQSREQPDWSHIPDRMFGPALDERGNPALRRIDDEYARIRSDMQFLFRLLANPTRRLSNRSSERDDRLLGKRVALLREEEQIAWLAHKGEQHGFRLLSTSVNPDVPAVQAAKQADEHGWRKATQTQTMHLTFGAVLFTGYLKVTDADRFRTALEHGIGSGKAFGFGLLSIAAQ
>NC_009523.1|WP_011955422.1|800170_800959_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MNTLFLRLEGPLQSWGLRARWGERDTTDAPTKSGVIGLLGCALGLRRDDARLRDLSDNLRMGVRVDLPGILMRDYHTTGGGRYSTIASTGGPRYHDEPYIGGVLSAEVTKGRIKVKINQKTGEPETDVSERYYLADASFLVALQGSPDYIGELATAIQSPVWPLFLGRKACVPSTPIFAGTGQFDILEDALKNLLLSPRVETAWQRSRPTQLRLLIETGPGAGNRQYDNIGTPSRRVFRARYVRETWLRLEDGPAPINTMEG
>NC_009523.1|WP_011955423.1|800955_802164_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MLIALHLLQNHAPSNLNRDDNNEPKDAIFGGVRRARISSQAIKRSIRWSDHFRAPFETQGLLAIRTQLLPEKVRHHLVNAGLNDDDQRAIVEAAARLGKGEQRSPSGEGEAGDERGDQNQPRSSSRSRRSSRQSNTTGDAERIKTAQLMFLTENEIQQLAQRLIEIVREKGAKHLNELQGDTLVREIGEYEPHSVDIAMFGRMTTSSPFKDVEAAVQVAHAISTHAVEMEFDFYTAVDDISGEAGAGFIGDTTFNSATYYKYFSIDWDGLLKNLHGEQNVARQSVEALIRAALFAIPSGKQNSFAAHNLPDLALVEVRKENIALSYANAFVKPVRATGKLSLIEASAKALEEYIPAINERYNLSAQRAFLSTVPFTLSGAECCSDLEKLITWLSKQIGGGVQ
>NC_009523.1|WP_011955424.1|802230_802734_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSEPTRQQRQQQQVDEFITALERLDNAGRARLKRNAGRSLHEARGVHQIFYQALPYEVAGRSEEAIYFLVATLYPLADSRNDQRSLGAILRAVRQSRASESIDRRFQALLDSDGENLPFRLRQAVRLAAASDQSIDWRRLLNDLLHWDHPDRYVQLQWARDYFTDHS
>NC_009523.1|WP_011955425.1|802726_804304_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MTASLSFNLWTEPWIRVIRRDGRDDEIGIGTCLTDAHELAALSDPSPLVAGGTHRLLTAILQAIHQPQDIGEIAALLHNAKFDINRLQAFEKNHAGRFDLFDPHAPFLQTGDVPLHSNHNPQPVARLFAEIPVATERVHFTHVTDDRHRICPACCARGLVTAPAFASSGGAGIRPSINGVPPIYVLPAGDTLFETLTLSLVSSDYLPPGADPKRADQAIWNSDPPVVGKNCEVSAVGYLESLTFPARRMRLYPQAGSVFCTNCGRQTDIFVATMLFEMGHWLSKQTGVWEDPFVAFRKPSKQSKNADLKPIRPEEGKAIWREYAVLLLDEDAAGLRPRIVRQLARLIDRGTLTGRQRLRFRCIGIRTDGKAKIFEWLDEALEAPPELLQDPDAAAYVGEALRQSHEVAAILKSTFERHFRPERGTGGSNEQKFIRFKTVLERLIADYWRRLGLHFRQFVNDLSDVWQRDDTARTWVILIIKEAQACFRTALDQTGDRADALRIRVEAQAECERQLHARRKEWLNE
>NC_009523.1|WP_083763249.1|804300_807198_-|CRISPR-associated-helicase/endonuclease-Cas3
MGRCRGSACSRRTSRRDDRRSPCTGSPVWSHTSQGNALMKSIDPLLLQFWGKTPRPGTPVTQFHPAIFHMLDVACVAEALLRHGPQRVRQALLHAWRGADPEALISWLPFLIALHDLGKLSAAFQGQDEAQRERLTRAGVQFRSHSPELHHAAISALWIHDYLAQNEPEIAQDLVWIFRDATGGHHGRFVDESMEDLRKKLHYVERGESRWRDWRKQGYVLLRDLLAPEDKPLHRIGTPVAPRPATVALTGLLVWSDWIGSNEHDFPATPGMDIHCYLSLSRQRAQNALTTHYLRASRSQPQYSDFRALFQAIAPRPLQAVVDRLSDNDLRQPALVVIEAPTGEGKTEAALALARRIAALRGIDEIFFALPTMATGNQMFTRLERFFRTLYGDGGSVRLSHSQAIVVEDDLRRRVTLSADQDRSDPEGCSADVMLGWFVGPKKAMLAPFGVGTVDQVELGGLNVRHYPLRLFGLASKVVMIDEVHAYDAYMSVILEHTLAWLATLGCSIILLSATLPRQRHDALARAFLRATEPAAALSLPEKLPYPALSLYHATAQSHHTCDVFRGEQRFILRFRKQSAPEEEAGRLLELIRNGGAVARICNRVDDAQAIYRALIASGARDVTCVLLHARFPLHERQRREQCISNLVGKDSQRTPEQRIIIAGTQVLEQSLDYDVDVMVSDFAPIDLLLQRAGRLHRHNRCRPDDHREPVLEIVIPYDEQGEPDWRRWRAIYEPYILWRSLATLCDGLTDDTRIVTLPRDYRTLIEAVYSAAPVVGRYAGEVAKAEQEYRKTIDAQTAKARSPLTPDAMIRAPIVEHGGRSYIEEETGAEASWQLAKTRLGDRVTLVPVYRVNGEVSLDPGGTFRIPTDVPPTLEQMKDVINVAVPVSDRAVIAAYRDEHRDRALRWTWSVIPAPLRGLHPLPLDVQTHSITINRRRLRLDNELGLVIEKGDADVSGDWFEEDL
>NC_009523.1|WP_011955427.1|807083_808082_-|WYL-domain-containing-protein
MSKTETRYERLDGIERYLARHQKRGCTTSELAREFGVDPDTIRRDLDLLEARGTGLIKEGRRYHLDHRRIIHTMKISNDEALALYMAARLLSRHSDEHNPHVVSALDKLSDALRSKSPLIADHIARAAAAVRERPVRREYVEALEVLTQGWATGRKVRLSYHSYSKDEMTERLFAPYFIEPSGIGYACYVIGFDDLRSELRTLKVERIRTIRLTDEQFAIPEEFDPIRLLASAWGVIWRDEGTIEVILRFAPQVVRRLKESVWHVSQRLEDCPDGSCLFSVRVGSTVEMKPWIRQWGAAVEVLAPDELRAEMIEEVRAQARLYGLIPHKETH
>NC_009523.1|WP_041332923.1|808234_808600_-|hypothetical-protein
MEAAAIGERERQAEAINAFVQAQRTPVVVAGDLNATPFHRAYHILQHGALSDVWQECGSGAGFTWPGNRTIGGVPVLPWFVRIDHLFTTNGIVCLDASVGPWDGVSDHRAVVATLAAGWRN

Crispr_ID: NC_009523_9

• CRISPR_ID: NC_009523_9
• CRISPR_location: 899020-899132
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_9

Consensus_repeat	Method
GCGGCGCGCAGGCGCGCTTCGGCTTCCCG	CRISPRCasFinder

spacers of NC_009523_9

>9.1|899049|55|NC_009523|CRISPRCasFinder
TGCCGCTGCTTCCTGCTGCGCCCGTTCCGCTTCTCGCCGCGCCTGCTCCTCGGCG

CRISPR arrays and Neighbor proteins around NC_009523_9

CRISPR arrays

The CRISPR arrays of NC_009523_9

>merge|NC_009523|9|899020-899132|CRISPRCasFinder
GCGGCGCGCAGGCGCGCTTCGGCTTCCCGTGCCGCTGCTTCCTGCTGCGCCCGTTCCGCTTCTCGCCGCGCCTGCTCCTCGGCGGCGGTGCGCAGGCGCGCTTCGGCTTCCCG

>NC_009523|9|8|899020-899132|CRISPRCasFinder
GCGGCGCGCAGGCGCGCTTCGGCTTCCCG	TGCCGCTGCTTCCTGCTGCGCCCGTTCCGCTTCTCGCCGCGCCTGCTCCTCGGCG
GCGGTGCGCAGGCGCGCTTCGGCTTCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase	unknown	unknown	gnl|CDD|224682
NC_009523.1|WP_041332953.1|915113_916367_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|226581
NC_009523.1|WP_011955493.1|890758_891037_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|340594
NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase	unknown	unknown	gnl|CDD|235681
NC_009523.1|WP_011955489.1|888030_888483_+|SufE-family-protein	unknown	unknown	gnl|CDD|376883
NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase	unknown	unknown	gnl|CDD|225450
NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|275228
NC_009523.1|WP_157040959.1|906232_906475_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040960.1|906532_907309_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl|CDD|280533
NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit	unknown	unknown	gnl|CDD|341142
NC_009523.1|WP_011955492.1|890016_890490_+|M67-family-metallopeptidase	unknown	unknown	gnl|CDD|163701
NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A	unknown	unknown	gnl|CDD|235502
NC_009523.1|WP_011955495.1|892372_892582_+|preprotein-translocase-subunit-SecG	unknown	unknown	gnl|CDD|235881
NC_009523.1|WP_011955490.1|888482_888872_+|iron-sulfur-cluster-assembly-scaffold-protein	unknown	unknown	gnl|CDD|143480
NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase	unknown	unknown	gnl|CDD|376616
NC_009523.1|WP_041334724.1|888895_889834_+|cysteine-synthase-family-protein	unknown	unknown	gnl|CDD|223110
NC_009523.1|WP_011955494.1|891149_892301_+|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl|CDD|180967
NC_009523.1|WP_011955496.1|892656_894327_+|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173878

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase	gnl|CDD|224682	COG1768, COG1768, Predicted phosphohydrolase [General function prediction only].	4.28014e-67
NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase	gnl|CDD|226581	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	6.42619e-121
NC_009523.1|WP_011955493.1|890758_891037_+|MoaD/ThiS-family-protein	gnl|CDD|340594	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins. CysO, also termed 9.5 kDa culture filtrate antigen cfp10A, together with CysM (Cysteine synthase M), forms a protein complex CysM-CysO that represents a new cysteine biosynthetic pathway in Mycobacterium tuberculosis. The replacement of the acetyl group of O-acetylserine by CysO thiocarboxylate to generate a protein-bound cysteine is catalyzed by CysM in a pyridoxal 5?-phosphate (PLP)-dependent manner. The family also includes QbsE that functions as the sulfide donor for the biosynthesis of thioquinolobactin in Pseudomonas fluorescens. A JAMM motif protein QbsD catalyzes removal of the carboxy-terminal dipeptide from QbsE. Both CysO and QbsE are similar to prokaryotic sulfur carrier proteins such as ThiS and MoaD, containing the beta-grasp ubiquitin-like fold.	2.67013e-43
NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase	gnl|CDD|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NC_009523.1|WP_011955489.1|888030_888483_+|SufE-family-protein	gnl|CDD|376883	pfam02657, SufE, Fe-S metabolism associated domain. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export).	2.2822e-39
NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase	gnl|CDD|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	1.2224e-101
NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase	gnl|CDD|275228	TIGR04435, ABC_transporter, restriction system-associated AAA family ATPase. Members of this family are AAA family ATPases by homology. They occur regularly in a conserved gene neighborhood with the restriction (R), modification (M), and specificity (S) proteins of an apparent type I restriction enzyme system, plus one additional uncharacterized protein. It is not clear whether members of this family contribute to restriction per se, or to another process such as transfer of mobile elements.	4.21686e-19
NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M	gnl|CDD|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	3.06299e-59
NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit	gnl|CDD|341142	cd17253, RMtype1_S_Eco933I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Escherichia coli O157:H7 EDL933 S subunit (S.Eco933I), Escherichia coli O104:H4 2009EL-2071 S subunit (S.Eco2071ORF3585P) TRD2-CR2, and Streptomyces species SirexAA-E S subunit (S.SspAAEORF2129P) TRD1-CR1 and TRD2-CR2. Escherichia coli O157:H7 EDL933 S subunit (S.Eco933I) recognizes 5'... CACNNNNNNNCTGG ... 3' and Escherichia coli O104:H4 2009EL-2071 S subunit (S.Eco2071ORF3585P) recognizes 5'... RTCANNNNNNNNGTGG ... 3'. The recognition sequence of Streptomyces species SirexAA-E S subunit (S.SspAAEORF2129P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, S.Eco2071ORF3585P TRD1 recognizes RTCA/TGAY and S.Eco2071ORF3585P TRD2 recognizes CCAC/GTGG. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	1.11667e-69
NC_009523.1|WP_011955492.1|890016_890490_+|M67-family-metallopeptidase	gnl|CDD|163701	cd08070, MPN_like, Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding). This family contains archaeal and bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation. The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.	3.15582e-44
NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A	gnl|CDD|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NC_009523.1|WP_011955495.1|892372_892582_+|preprotein-translocase-subunit-SecG	gnl|CDD|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	6.60726e-06
NC_009523.1|WP_011955490.1|888482_888872_+|iron-sulfur-cluster-assembly-scaffold-protein	gnl|CDD|143480	cd06664, IscU_like, Iron-sulfur cluster scaffold-like proteins. IscU_like and NifU_like proteins. IscU and NifU function as a scaffold for the assembly of [2Fe-2S] clusters before they are transferred to apo target proteins. They are highly conserved and play vital roles in the ISC and NIF systems of Fe-S protein maturation. NIF genes participate in nitrogen fixation in several isolated bacterial species. The NifU domain, however, is also found in bacteria that do not fix nitrogen, so it may have wider significance in the cell. Human IscU interacts with frataxin, the Friedreich ataxia gene product, and incorrectly spliced IscU has been shown to disrupt iron homeostasis in skeletal muscle and cause myopathy.	4.67244e-36
NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase	gnl|CDD|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	7.53631e-34
NC_009523.1|WP_041334724.1|888895_889834_+|cysteine-synthase-family-protein	gnl|CDD|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	8.63306e-135
NC_009523.1|WP_011955494.1|891149_892301_+|molybdopterin-synthase-adenylyltransferase-MoeB	gnl|CDD|180967	PRK07411, PRK07411, molybdopterin-synthase adenylyltransferase MoeB.	0
NC_009523.1|WP_011955496.1|892656_894327_+|peptide-ABC-transporter-substrate-binding-protein	gnl|CDD|173878	cd08513, PBP2_thermophilic_Hb8_like, The substrate-binding component of ABC-type thermophilic oligopeptide-binding protein Hb8-like import systems, contains the type 2 periplasmic binding fold. This family includes the substrate-binding domain of an ABC-type oligopeptide-binding protein Hb8 from Thermus thermophilius and its closest homologs from other bacteria. The structural topology of this substrate-binding domain is similar to those of DppA from Escherichia coli and OppA from Salmonella typhimurium, and thus belongs to the type 2 periplasmic binding fold protein (PBP2) superfamily. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. The type 2 periplasmic binding proteins are soluble ligand-binding components of ABC or tripartite ATP-independent transporters and chemotaxis systems. Members of the PBP2 superfamily function in uptake of a variety of metabolites in bacteria such as amino acids, carbohydrate, ions, and polyamines. Ligands are then transported across the cytoplasmic membrane energized by ATP hydrolysis or electrochemical ion gradient. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.91747e-135

Protein sequences

>NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase
MAFQPVDTRVNFPRLEEQVLDLWQTRRIVERSLESGDKPFVFYEGPPTANGRPGIHHAISRIFKDVICRYRAMQGYRIIGRREGWDTHGLPVEIEVEKKLGFSGKPDIEKYGVAEFNAQCRKSVWEYIQDWRQFTRRIAYWVSDDAYITYENDYIESLWWIFRQLWDRGLLFRDYKVSMHCPRCGTSLSDHEVSLGFRDDVDDPSVWVKFRVRETNQEALRGAAFLAWTTTPWTLPANVALAVKPDATYVLASFDGERLVLAEALVHTVLGDGVTIEQTFRGADLVGTRYENLFDGVPAPGDTVDWSRAYTVVADDFVSLEDGTGIVHIAPAYGDLEIGRKYGLPTLFSVDLSGNVLPEFASLGFAGKFFKQADPDITRNLRTRGLLLKSGRVKHSYPFCWRCDTPLLYYAKRSWYIRTTAMKDRLVANNRLINWVPEHIREGRFGNWLENNIDWAVSRERYWGTPIPIWVAEDGYAECIGSLAELEQKVGRSLKDLDLHRPYVDELTWVDPQHGLMRRIPDVADCWFDSGAMPVAQWHYPMENAEIYELAKQADYICEAVDQTRGWFYTLHALSTLLFDRPAFKNVICLGHILDAEGQKMSKSRGNVVDPWMVMNEHGADALRWYLFTAAPPGSPRRFSAGLVAESLRKFLLTLWNTYAFFVTYANLDGWSPGNNGVAEHLDPATLTPIDRWALARLNSLVRDVTAAFEAYDVTTAGRAIEDFVDELSNWYVRRNRRRFWKSEHDRDKQAAYATLYTCLLTVAKLVAPFIPFVADAIYRNLVGLEAQEASPDTPESVHLAAWPVVNEALLDDRLVDDTEVLLKAVSVGRAARRAAGIKVRQPLREMWVRAPTPAALEGLRRFEAELREELNVKAVRYLDSATSLVEYRFKPNLRLVGRKYGKLVPALTEALRDLTGDAARAAAQAVEEGRNITLSIEGQTIELLPEEVLVESSSPQGYAVAEDGGVLVALDTTLTPELTMEGLARELVRNIQDARKDAGFAISDRIIVYLGGADGDAEVEAMLRAWGDYVREETLADDLRLCAPPDHVHTTTLELDGGRTLIIGVSRR
>NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase
MTIDHLVDPAWLLEHLNDPDIRIADLRWYLLEPGRGRIEYLEAHIPGTVYLDIDTDLAAPPFQGPGRHPIPSPEAFAATASRAGIAPTTHVIAYDSVGGAYAARLWWLLRYFGHERVSLLDGGWPAWTAAGFPVETGDVAPQPTVFVPRPNRLMVVDADAVETLRHNPRALIIDVRAPERYQGIAEPLDPRAGHIPGAVSAPYADAIDTNGRLLPADALRARYAALGADRAETIVCYCGSGVTAAHTILALERAGWKNVLLYEGSWSDWSRDPARPAACDIIPCKGCDGDE
>NC_009523.1|WP_011955496.1|892656_894327_+|peptide-ABC-transporter-substrate-binding-protein
MARRIRWQILIASISALTVLLLMSYLALTRASVARPLAGGDYIEGVVGAPVHLNPLVADPASDPVAADIQRLVFEGLTRPGPDGLPMPALAESWAVDESGTVYTFTLRSGASWHDGAPVTVDDVLFTLRAVQGPAFAGDQNVAAFWRTVLVDRVGERSVSFRLEAPFAPFLRLTGFPILPAHLLRNVPPEQWEAHPFNRLPVGAGPYRLVELDEQRALLRANPRYFGATPFIETIELRFFRTEQEAFAALTRSEIQGLAFTGASALADVNLPRGIVRRQALLDGYTALSFNLRDGLLTDLGVRRALATALDKDALIASALAGKVMRLDTPILHGWWAETSDVSWYEPDVARAMAQLDTLGYVPGADGVRVRDGQPLVFSLLTDNSPTRRAVAEEIARQWSAIGVQIVIEPVEPTEMQRRLETHEFTIALHGWQRLGSDPDVFELWHSSQAERGRNYAGLADATIDEILSSARKIYDITDRAELYREFQERWVELAPGIILYQPILFHATVADLGDTIAVPPDAAASPHLLIGREGRFVNVNRWYLRSAREIRGDLR
>NC_009523.1|WP_011955495.1|892372_892582_+|preprotein-translocase-subunit-SecG
MKIALYSALIIVSVALTFLVVVQGRTAGLQQRDTIYRTKRGIEKTMHQATIVLAVVFLLLALIASLPIW
>NC_009523.1|WP_011955494.1|891149_892301_+|molybdopterin-synthase-adenylyltransferase-MoeB
MVLPSLSNEEIRRYSRHLILPEFGMEGQRKLKQGSVLLIGTGGLGSPLALYLAAAGVGHIGLVDFDIVDESNLQRQIIHGTSTLGIRKTESAKMRLRDLNPHIDIATYDVQITSDNAFDLIRPYDVIVDGTDNFPTRYLTNDACVMLGKPNVYGSIFRFEGQATVFSPKHGGPCYRCLYPEPPPPGLVPSCAEGGVLGVLPGVIGTIQATEAIKLLTGIGEPLIGRLLLYDALAMRFRELKLRRNPDCPVCGDHPTVTELIDYQQFCGISPEEAHRDATIEITPAEVADWLHSDNPPFLLDVREPNEWEICHIPGAVRISVNELAERMNELDSAVEMVVYCRSGVRSARAVELLRQAGFRKVKNMAGGILRWSDEVDPSVPKY
>NC_009523.1|WP_011955493.1|890758_891037_+|MoaD/ThiS-family-protein
MAVTVTIPTALRQYVGGNASVSLAAGSVGQILAALSEQYPQLGRHLYNEQGALRSFVNIYVGDEDIRHLQGIETPVPDGETVSIIPAIAGGV
>NC_009523.1|WP_011955492.1|890016_890490_+|M67-family-metallopeptidase
MMIILSDHVRYAIVQHAEATYPNECVGLLIGRIDESRIAVEDIFPTPNRWTVETGLTPTDAEHSQRDRFYLDPRDYLRADRAARARHLDVVGCYHSHPDHPATPSPRDLTGAQGVGGGSQFVFLIQSVIDGRAAELTAWTLDESAARFVAEEIVVVC
>NC_009523.1|WP_041334724.1|888895_889834_+|cysteine-synthase-family-protein
MDRRSTLIDLVGNTPLLRLARIDPDLPPGVAVYAKAEWYNPGGSVKDRPALWMIRDGERRGLLRPGMRIADATSGNTGIAYATLGAALGYQVTLALPANASPERRRILRSLGAELVLTDPLEGMDAAIRKIRALVQEHPERYFYPDQYNNPANPRAHEESTGPEIWAQTGGRVTHFVAALGTSGTFMGIGRFLRTRNPAVRLIAVQPDGPYHALEGVKHMASTTLVPGIYDPTLADATIEIRSEEAFAMARRLARTEGLMVGVSAAANVAAALRVARDLREGVVVTILCDGAAKYLSDRFWEDGDGRDGEGI
>NC_009523.1|WP_011955490.1|888482_888872_+|iron-sulfur-cluster-assembly-scaffold-protein
MDRAALIARLLNHYEHPRHRGPLVDADVTLTGGHPECGDVITIYLKVEPPDRITAVSFEGRGCTISQAAASILTELAAGATFAAVETMTPDEMIDLLEREVVGTRPRCATLALRILKAAISTCRMGKMS
>NC_009523.1|WP_011955489.1|888030_888483_+|SufE-family-protein
MSDIPAGLPPRLRAIVEEFQAADRAEKLELLLEYSDRLPPLPDHLRNNRAAMEQVHECATPVYAAVESHDERLTFHIDVPEESPTVRGYAALLRDGLEGATPEEVLAIPGDFFYAMGLHQVLSPQRLNGISYLLAYLKRLATRELAKRNG
>NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A
MEIGIVRPRNITDEMRSAYLDYAMSVIVSRALPDARDGLKPVQTRILYGMWDMGIRANQPFKKCARIVGEILGKMHPHGDSAVYDALVRLAQPWNMRYPLVEGQGNFGSIDGDPPAAMRYTEARLTPIAEEMLADIEKNTVDFRDNFDGLYREPVVLPARIPNLLLNGAAGIAVGMATNIPPHNLNEVCDAITHLIDNPDATIEDLARIMPGPDFPTAGMILGTEGIMNAYSTGRGHITIRAKAHIEEAARGAFHIVVTELPYQVNKARLQERIAELARDRKIEGIRDVRDESDRSGMRLVIILKQDAQPKKVLNALYKHTQMQTTFGVNMLALVEGGRQPRLLTLKRLLQEYIDHRREVIRRRTEFDLDKARARAHILEGLKIAIDNLDAVIATIRNSRSRDHARTNLMNGFALSEAQANAILEMQLGRLAALERQRIEEEYREVIQLIGELEDILANPRKILHLIKQDLADLKAKYGDPRRTRIIPDADGEVSDEDLIPDVRVLITLTDRGYVKRQSPDIYRTQRRGGRGIRGATIREQDVVRHILAASTMDDLLFFTDRGKVYQIKAHELPDASRTAKGLPLVNLIALEPGEQVTSVLAVPDFEKAEYLIMATVRGKIKRTSIKEYSQVRSNGLIAIGLEDGDELGWVAMTQGHEDVLLTTARGQTIRFRQEEVRPMGRPATGVIGIALAEGDRVVSMDLARENAALLVVTANGYGKRTALEEYPVKGRATGGVITIRLRPGDEVAVAHVVHEHSLLTFITESGMVMRTEADGISMFGRNTQGVTIVNLAPNDRVAALCVEEPDESEERSDRVLIDPTRG
>NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase
MRSMVWSISDLHLSFARPKPMDIFGSRWKDHPERIAAAWRARVKPDDVVLLAGDTSWAMKLQDALVDLQWIAALPGRKIISRGNHDYWWSSERTNRVRRSLPPGIDILEASAIDIGEAVVCATRGWNTPETPGFQESTDRPYYERELMRLDTALAAAQHLASGKRPIIVMIHFPPFAGRRPTEFARRIAAAKAAACVYGHLHRPEDWAVATQGLVDGVYYQLTSCDYLGFGPVAVRGLRPVVE
>NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase
MPRNESDTRAQLVDPLLNRAGWTRSQVTREHYYRPDWQYTPGRVILRGGRVEREKPRVVDYLLRYTEAFPIAVVEAKAEDLPAVAGLEQAKRYARENNLMFAYATNGHEIIEWDGFTDTTRELKEFPSPDELWRRWELNTGVHSPKAAGRTIAELRPLYNAAVAAARQRNPLLHPYAPSSLTRGSEPRYFQEAAIRETLVRVMRGQKRILLTMATGTGKTFTAMQIVWKLVKSGWLHQQKGRAGKILFLADREVLRNQAYNAFSPFASDHGDPRFMLDGKRRLSLQYDLYFGIYQTLWATDPRGKRLFEQFPHDFFDVVIVDEAHRSGFGTWKEILDHFESAIHLGMTATPRQDENVDTYAYFCAEEPAIPLDPQDPSKGVLHQAAYTYSLSQGIEDGFLATYKVHRVLTSIDKDGLHISRVLEQGAEVIVPEDAKVREEYYTPNFEREIRLPDRTHTLVKHLAKLLRQFGPLHKTMVFCVDVEHAREVARLLNNEFASLGLGHDYAVPIVSEEGEQAQRWLNQFQDSDRKTPVVATTAELLSTGVDVPACRNIVFMKTISSPILFKQIIGRGSRLDPATGKLWFRIIDYTNATRLLDPRWDCPTRPVQVAPDPNAQTGIAQGTVRLAKSSNVIQGASVAVMAGPNDQRGPILTDENGQYRFENLPVGEISIVVYAPRFNRQQKHINTQDSTPVTLDFELSPIQQSGRQEIVVKNLQVTIAEEATFLVAGLNEPLTLEQYVDYSREKTRALISSWEKLVQIWREEKQRRQAQDELQHVSVYPDVLAEVLDIRQTDPFDVLAYIAFGRHPILTRDQRAQAFLQQHADWLKAFPDQQRRVIEALLEQYRLSGVEEMVNPRVFRLPAFKPLGGLKGVSQQFGGGEALRQTVMELQRRLYSFG
>NC_009523.1|WP_157040959.1|906232_906475_-|hypothetical-protein
MRQGFSPPITADYDCNPQGLHDVRQGFSPPITADYDCNPQGLHDVRQGFSPSITADYDCSPQGLHDVRQGFSPPITLIHR
>NC_009523.1|WP_157040960.1|906532_907309_+|hypothetical-protein
MDAIAPQGLSCPQKGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSRPQKGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSCPQRGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSRPQKGLQPALIAHRPHESRRGRHAGIDGKIGRRAS
>NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase
MTYWRLHYHLIWSTQDRLPTLTGEREKMFYGVLYRKAAELGVKIHAAGNVEDHVHVVASIPPKLAVAECVRHLKGASAYAINRMPDSDGQFKWQSGYGALSIGEQSLETVMAYAARQKEHHANKTTIDAYEESHDEE
>NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M
MQLSLGLNETLGTDLWRACDILRRDNNVGGVMQYTEHLAWLLFLKFFDQEEKKRAQEAAFRGETYIPVLPPDLAWDAWAGPEALQKWDSSRGQLVAFVRGRLLPGLASLNGSPLANTIARLFSDESIGDQTVVRNVPVCASDYNLKDVLTIINAIDFERDDHFFTITRFYEDLLARMGQENQIAGEFHTPRPIIRFMVEVIDPQIGETVYDPACGSAGFLAQAHLWMEKNAHTLEDLETLQQRTFYGREKKALAALLGTMNLILHGVTTPNIVRANTLEESVKTGVAERFDIVLTNPPFGGKEGRHIQQNFPVPGNATELLFLQHIIKKLKPTANARAAVVVPEGTLFRSGAFAEVKRMLLDDFHLFAVISLPPGAFAPYSDVKTALLFFRRTEGSHIRNPLARNETWYYELPLPAGLKKFSKGSPILDEHFTEARRLWEQWKRWLDGEGERPFPLAVGVRTAGETASRPYWVETLDDLRARGYDLSARNPYRGERATLPRPAELTVRLLERQRELRAAMERLHALVSNGEEEE
>NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit
MMERWELPKGWGWKRLKTLVTVNYGKGLSEKQRKAGNVPVYGANGVVGFHDTSITKGQTIVIGRKGSAGAVNWSEIACWPIDTTFFIDEFPEILYPQFLYQFLRSQQIDRLQQSAAIPGLNRDVLYSVEVPIPYPDDPAHSLAEQRRIVARLELLLGETRAMREDIQAMRRDLAQVMESALAEVFPNPNGEMPKGWGWKSIDDLFELQQGASMSPRRRQGRNPQPFLRTKNILWGEVDTSDVDVMDFTEDEIERLKLRKGDLLICEGGDVGRAAVWEDQLPLVMYQNHIHRLRRKSDDADPKFYVYWMKAAYQLFKIYQGEESRTAIPNLSGRRLKNFLVPTTSLTEQRRIVAYLEHIAEEIRAMDDLLAQDLRDIEVLEQSILAAAFRGEV
>NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase
MRLLRFYIDSYRVLSKLDVRFDPGAPQDNQERPYHLDFLVGVNGTGKSTVLRLLARIFRGVTVSFEELSDLPFILEYYREGDRHKKIYIANIHRTPDGAMQSLDRYFVCTAGGLDAPYDVESPDDEHLKDVVESELLPERIIAYTTGSEDEWLDHDQPDPQANASDRPVQLEMTAAERTLQERTGWSWVQTEKQEGKAPQFRFIRQAQLALVALAGLLLHHETEQQSPLANALKQVNFQGMAGFSLQFNLTYASVNERNQIWQRFGQHASRAIRSGGRVLMVFQPDTFARLLKEHGSALALFEQLADWYSQESPLLTKVNLFLERAKTEKQASPLHTWEWLSDGERSFLGRMCLFMLFGDVESLILLDEPEVHFNDYWKRHIVDTIHQILAGKRKPHRSHLLIATHSSISLSDVPKEDVVVLRRSGMLTDTMSMPSIQTFGADPSDIMVHVFDAPHAMGQHSVNEIEQWLGEAYQKPATERRKFLDEKLKQVSPGYWAYRIRREMVGLP
>NC_009523.1|WP_041332953.1|915113_916367_+|hypothetical-protein
MIHEVRLAHETKYYLWQITCLQIDVLACAVQIQLNFTEQDLQTALKCKMSQQRAMRVANWICRHRDTREGLQTFVTGTQCERRSLVESMQQDVLRLYCGQLNKTLECCFADDRHLPAYQKGAKQFLLAFYDQLSNGIPTDILASNSRKYSRYGREQFFKAYEEANPRQSVCAICDEHRPITIIRGHVHSDIEHYFPKSVYPHLACHPYNLIPICQACNSAHHNKDPLQGRGCSPRRRTLGEVFLPYRNESVRSHGAVIFDGNKPDLYIVERNNNNNSLFYTRVTAFLEIYDVPQRWKSQIHRIGEQLWRQISHFALAEIEKNEALDVFKVKTVLERLLNYFIEDLGATSWDYVLIWYLSYLLVTEIETAIQNHQPPHEVPLIQTLDEIIKNPSPDIPALPAHKVLEISRELYNQGLP

Crispr_ID: NC_009523_10

• CRISPR_ID: NC_009523_10
• CRISPR_location: 907518-907609
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_10

Consensus_repeat	Method
TCGTGCAAGCCCTGCGGGCTGGGATC	CRISPRCasFinder

spacers of NC_009523_10

>10.1|907544|40|NC_009523|CRISPRCasFinder
GTGATCGGCGGTGATCGGCGGGCTGAAGCCCTGCCTCACA

CRISPR arrays and Neighbor proteins around NC_009523_10

CRISPR arrays

The CRISPR arrays of NC_009523_10

>merge|NC_009523|10|907518-907609|CRISPRCasFinder
TCGTGCAAGCCCTGCGGGCTGGGATCGTGATCGGCGGTGATCGGCGGGCTGAAGCCCTGCCTCACATCGTGCAAGCCCTGCGGGCTGGGATC

>NC_009523|10|9|907518-907609|CRISPRCasFinder
TCGTGCAAGCCCTGCGGGCTGGGATC	GTGATCGGCGGTGATCGGCGGGCTGAAGCCCTGCCTCACA
TCGTGCAAGCCCTGCGGGCTGGGATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase	unknown	unknown	gnl|CDD|224682
NC_009523.1|WP_041332953.1|915113_916367_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955511.1|917907_919212_-|hypothetical-protein	unknown	unknown	gnl|CDD|273167
NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit	unknown	unknown	gnl|CDD|341142
NC_009523.1|WP_011955514.1|920980_921856_-|DNA-adenine-methylase	unknown	unknown	gnl|CDD|223415
NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase	unknown	unknown	gnl|CDD|235681
NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|226581
NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|275228
NC_009523.1|WP_157040959.1|906232_906475_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040960.1|906532_907309_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl|CDD|280533
NC_009523.1|WP_157040961.1|917124_917841_-|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl|CDD|234997
NC_009523.1|WP_011955512.1|919227_919746_-|adenine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|235028
NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A	unknown	unknown	gnl|CDD|235502
NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase	unknown	unknown	gnl|CDD|225450
NC_009523.1|WP_011955513.1|919836_920970_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase	unknown	unknown	gnl|CDD|376616
NC_009523.1|WP_011955495.1|892372_892582_+|preprotein-translocase-subunit-SecG	unknown	unknown	gnl|CDD|235881
NC_009523.1|WP_011955494.1|891149_892301_+|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl|CDD|180967
NC_009523.1|WP_011955496.1|892656_894327_+|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173878

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase	gnl|CDD|224682	COG1768, COG1768, Predicted phosphohydrolase [General function prediction only].	4.28014e-67
NC_009523.1|WP_011955511.1|917907_919212_-|hypothetical-protein	gnl|CDD|273167	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	7.11202e-07
NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase	gnl|CDD|226581	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	6.42619e-121
NC_009523.1|WP_011955514.1|920980_921856_-|DNA-adenine-methylase	gnl|CDD|223415	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair].	2.30157e-62
NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase	gnl|CDD|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit	gnl|CDD|341142	cd17253, RMtype1_S_Eco933I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Escherichia coli O157:H7 EDL933 S subunit (S.Eco933I), Escherichia coli O104:H4 2009EL-2071 S subunit (S.Eco2071ORF3585P) TRD2-CR2, and Streptomyces species SirexAA-E S subunit (S.SspAAEORF2129P) TRD1-CR1 and TRD2-CR2. Escherichia coli O157:H7 EDL933 S subunit (S.Eco933I) recognizes 5'... CACNNNNNNNCTGG ... 3' and Escherichia coli O104:H4 2009EL-2071 S subunit (S.Eco2071ORF3585P) recognizes 5'... RTCANNNNNNNNGTGG ... 3'. The recognition sequence of Streptomyces species SirexAA-E S subunit (S.SspAAEORF2129P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, S.Eco2071ORF3585P TRD1 recognizes RTCA/TGAY and S.Eco2071ORF3585P TRD2 recognizes CCAC/GTGG. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	1.11667e-69
NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase	gnl|CDD|275228	TIGR04435, ABC_transporter, restriction system-associated AAA family ATPase. Members of this family are AAA family ATPases by homology. They occur regularly in a conserved gene neighborhood with the restriction (R), modification (M), and specificity (S) proteins of an apparent type I restriction enzyme system, plus one additional uncharacterized protein. It is not clear whether members of this family contribute to restriction per se, or to another process such as transfer of mobile elements.	4.21686e-19
NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M	gnl|CDD|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	3.06299e-59
NC_009523.1|WP_011955512.1|919227_919746_-|adenine-phosphoribosyltransferase	gnl|CDD|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	7.14053e-100
NC_009523.1|WP_157040961.1|917124_917841_-|phosphoadenylyl-sulfate-reductase	gnl|CDD|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.70913e-94
NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A	gnl|CDD|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase	gnl|CDD|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	1.2224e-101
NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase	gnl|CDD|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	7.53631e-34
NC_009523.1|WP_011955495.1|892372_892582_+|preprotein-translocase-subunit-SecG	gnl|CDD|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	6.60726e-06
NC_009523.1|WP_011955494.1|891149_892301_+|molybdopterin-synthase-adenylyltransferase-MoeB	gnl|CDD|180967	PRK07411, PRK07411, molybdopterin-synthase adenylyltransferase MoeB.	0
NC_009523.1|WP_011955496.1|892656_894327_+|peptide-ABC-transporter-substrate-binding-protein	gnl|CDD|173878	cd08513, PBP2_thermophilic_Hb8_like, The substrate-binding component of ABC-type thermophilic oligopeptide-binding protein Hb8-like import systems, contains the type 2 periplasmic binding fold. This family includes the substrate-binding domain of an ABC-type oligopeptide-binding protein Hb8 from Thermus thermophilius and its closest homologs from other bacteria. The structural topology of this substrate-binding domain is similar to those of DppA from Escherichia coli and OppA from Salmonella typhimurium, and thus belongs to the type 2 periplasmic binding fold protein (PBP2) superfamily. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. The type 2 periplasmic binding proteins are soluble ligand-binding components of ABC or tripartite ATP-independent transporters and chemotaxis systems. Members of the PBP2 superfamily function in uptake of a variety of metabolites in bacteria such as amino acids, carbohydrate, ions, and polyamines. Ligands are then transported across the cytoplasmic membrane energized by ATP hydrolysis or electrochemical ion gradient. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.91747e-135

Protein sequences

>NC_009523.1|WP_157040960.1|906532_907309_+|hypothetical-protein
MDAIAPQGLSCPQKGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSRPQKGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSCPQRGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSRPQKGLQPALIAHRPHESRRGRHAGIDGKIGRRAS
>NC_009523.1|WP_157040959.1|906232_906475_-|hypothetical-protein
MRQGFSPPITADYDCNPQGLHDVRQGFSPPITADYDCNPQGLHDVRQGFSPSITADYDCSPQGLHDVRQGFSPPITLIHR
>NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase
MPRNESDTRAQLVDPLLNRAGWTRSQVTREHYYRPDWQYTPGRVILRGGRVEREKPRVVDYLLRYTEAFPIAVVEAKAEDLPAVAGLEQAKRYARENNLMFAYATNGHEIIEWDGFTDTTRELKEFPSPDELWRRWELNTGVHSPKAAGRTIAELRPLYNAAVAAARQRNPLLHPYAPSSLTRGSEPRYFQEAAIRETLVRVMRGQKRILLTMATGTGKTFTAMQIVWKLVKSGWLHQQKGRAGKILFLADREVLRNQAYNAFSPFASDHGDPRFMLDGKRRLSLQYDLYFGIYQTLWATDPRGKRLFEQFPHDFFDVVIVDEAHRSGFGTWKEILDHFESAIHLGMTATPRQDENVDTYAYFCAEEPAIPLDPQDPSKGVLHQAAYTYSLSQGIEDGFLATYKVHRVLTSIDKDGLHISRVLEQGAEVIVPEDAKVREEYYTPNFEREIRLPDRTHTLVKHLAKLLRQFGPLHKTMVFCVDVEHAREVARLLNNEFASLGLGHDYAVPIVSEEGEQAQRWLNQFQDSDRKTPVVATTAELLSTGVDVPACRNIVFMKTISSPILFKQIIGRGSRLDPATGKLWFRIIDYTNATRLLDPRWDCPTRPVQVAPDPNAQTGIAQGTVRLAKSSNVIQGASVAVMAGPNDQRGPILTDENGQYRFENLPVGEISIVVYAPRFNRQQKHINTQDSTPVTLDFELSPIQQSGRQEIVVKNLQVTIAEEATFLVAGLNEPLTLEQYVDYSREKTRALISSWEKLVQIWREEKQRRQAQDELQHVSVYPDVLAEVLDIRQTDPFDVLAYIAFGRHPILTRDQRAQAFLQQHADWLKAFPDQQRRVIEALLEQYRLSGVEEMVNPRVFRLPAFKPLGGLKGVSQQFGGGEALRQTVMELQRRLYSFG
>NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase
MRSMVWSISDLHLSFARPKPMDIFGSRWKDHPERIAAAWRARVKPDDVVLLAGDTSWAMKLQDALVDLQWIAALPGRKIISRGNHDYWWSSERTNRVRRSLPPGIDILEASAIDIGEAVVCATRGWNTPETPGFQESTDRPYYERELMRLDTALAAAQHLASGKRPIIVMIHFPPFAGRRPTEFARRIAAAKAAACVYGHLHRPEDWAVATQGLVDGVYYQLTSCDYLGFGPVAVRGLRPVVE
>NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A
MEIGIVRPRNITDEMRSAYLDYAMSVIVSRALPDARDGLKPVQTRILYGMWDMGIRANQPFKKCARIVGEILGKMHPHGDSAVYDALVRLAQPWNMRYPLVEGQGNFGSIDGDPPAAMRYTEARLTPIAEEMLADIEKNTVDFRDNFDGLYREPVVLPARIPNLLLNGAAGIAVGMATNIPPHNLNEVCDAITHLIDNPDATIEDLARIMPGPDFPTAGMILGTEGIMNAYSTGRGHITIRAKAHIEEAARGAFHIVVTELPYQVNKARLQERIAELARDRKIEGIRDVRDESDRSGMRLVIILKQDAQPKKVLNALYKHTQMQTTFGVNMLALVEGGRQPRLLTLKRLLQEYIDHRREVIRRRTEFDLDKARARAHILEGLKIAIDNLDAVIATIRNSRSRDHARTNLMNGFALSEAQANAILEMQLGRLAALERQRIEEEYREVIQLIGELEDILANPRKILHLIKQDLADLKAKYGDPRRTRIIPDADGEVSDEDLIPDVRVLITLTDRGYVKRQSPDIYRTQRRGGRGIRGATIREQDVVRHILAASTMDDLLFFTDRGKVYQIKAHELPDASRTAKGLPLVNLIALEPGEQVTSVLAVPDFEKAEYLIMATVRGKIKRTSIKEYSQVRSNGLIAIGLEDGDELGWVAMTQGHEDVLLTTARGQTIRFRQEEVRPMGRPATGVIGIALAEGDRVVSMDLARENAALLVVTANGYGKRTALEEYPVKGRATGGVITIRLRPGDEVAVAHVVHEHSLLTFITESGMVMRTEADGISMFGRNTQGVTIVNLAPNDRVAALCVEEPDESEERSDRVLIDPTRG
>NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase
MAFQPVDTRVNFPRLEEQVLDLWQTRRIVERSLESGDKPFVFYEGPPTANGRPGIHHAISRIFKDVICRYRAMQGYRIIGRREGWDTHGLPVEIEVEKKLGFSGKPDIEKYGVAEFNAQCRKSVWEYIQDWRQFTRRIAYWVSDDAYITYENDYIESLWWIFRQLWDRGLLFRDYKVSMHCPRCGTSLSDHEVSLGFRDDVDDPSVWVKFRVRETNQEALRGAAFLAWTTTPWTLPANVALAVKPDATYVLASFDGERLVLAEALVHTVLGDGVTIEQTFRGADLVGTRYENLFDGVPAPGDTVDWSRAYTVVADDFVSLEDGTGIVHIAPAYGDLEIGRKYGLPTLFSVDLSGNVLPEFASLGFAGKFFKQADPDITRNLRTRGLLLKSGRVKHSYPFCWRCDTPLLYYAKRSWYIRTTAMKDRLVANNRLINWVPEHIREGRFGNWLENNIDWAVSRERYWGTPIPIWVAEDGYAECIGSLAELEQKVGRSLKDLDLHRPYVDELTWVDPQHGLMRRIPDVADCWFDSGAMPVAQWHYPMENAEIYELAKQADYICEAVDQTRGWFYTLHALSTLLFDRPAFKNVICLGHILDAEGQKMSKSRGNVVDPWMVMNEHGADALRWYLFTAAPPGSPRRFSAGLVAESLRKFLLTLWNTYAFFVTYANLDGWSPGNNGVAEHLDPATLTPIDRWALARLNSLVRDVTAAFEAYDVTTAGRAIEDFVDELSNWYVRRNRRRFWKSEHDRDKQAAYATLYTCLLTVAKLVAPFIPFVADAIYRNLVGLEAQEASPDTPESVHLAAWPVVNEALLDDRLVDDTEVLLKAVSVGRAARRAAGIKVRQPLREMWVRAPTPAALEGLRRFEAELREELNVKAVRYLDSATSLVEYRFKPNLRLVGRKYGKLVPALTEALRDLTGDAARAAAQAVEEGRNITLSIEGQTIELLPEEVLVESSSPQGYAVAEDGGVLVALDTTLTPELTMEGLARELVRNIQDARKDAGFAISDRIIVYLGGADGDAEVEAMLRAWGDYVREETLADDLRLCAPPDHVHTTTLELDGGRTLIIGVSRR
>NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase
MTIDHLVDPAWLLEHLNDPDIRIADLRWYLLEPGRGRIEYLEAHIPGTVYLDIDTDLAAPPFQGPGRHPIPSPEAFAATASRAGIAPTTHVIAYDSVGGAYAARLWWLLRYFGHERVSLLDGGWPAWTAAGFPVETGDVAPQPTVFVPRPNRLMVVDADAVETLRHNPRALIIDVRAPERYQGIAEPLDPRAGHIPGAVSAPYADAIDTNGRLLPADALRARYAALGADRAETIVCYCGSGVTAAHTILALERAGWKNVLLYEGSWSDWSRDPARPAACDIIPCKGCDGDE
>NC_009523.1|WP_011955496.1|892656_894327_+|peptide-ABC-transporter-substrate-binding-protein
MARRIRWQILIASISALTVLLLMSYLALTRASVARPLAGGDYIEGVVGAPVHLNPLVADPASDPVAADIQRLVFEGLTRPGPDGLPMPALAESWAVDESGTVYTFTLRSGASWHDGAPVTVDDVLFTLRAVQGPAFAGDQNVAAFWRTVLVDRVGERSVSFRLEAPFAPFLRLTGFPILPAHLLRNVPPEQWEAHPFNRLPVGAGPYRLVELDEQRALLRANPRYFGATPFIETIELRFFRTEQEAFAALTRSEIQGLAFTGASALADVNLPRGIVRRQALLDGYTALSFNLRDGLLTDLGVRRALATALDKDALIASALAGKVMRLDTPILHGWWAETSDVSWYEPDVARAMAQLDTLGYVPGADGVRVRDGQPLVFSLLTDNSPTRRAVAEEIARQWSAIGVQIVIEPVEPTEMQRRLETHEFTIALHGWQRLGSDPDVFELWHSSQAERGRNYAGLADATIDEILSSARKIYDITDRAELYREFQERWVELAPGIILYQPILFHATVADLGDTIAVPPDAAASPHLLIGREGRFVNVNRWYLRSAREIRGDLR
>NC_009523.1|WP_011955495.1|892372_892582_+|preprotein-translocase-subunit-SecG
MKIALYSALIIVSVALTFLVVVQGRTAGLQQRDTIYRTKRGIEKTMHQATIVLAVVFLLLALIASLPIW
>NC_009523.1|WP_011955494.1|891149_892301_+|molybdopterin-synthase-adenylyltransferase-MoeB
MVLPSLSNEEIRRYSRHLILPEFGMEGQRKLKQGSVLLIGTGGLGSPLALYLAAAGVGHIGLVDFDIVDESNLQRQIIHGTSTLGIRKTESAKMRLRDLNPHIDIATYDVQITSDNAFDLIRPYDVIVDGTDNFPTRYLTNDACVMLGKPNVYGSIFRFEGQATVFSPKHGGPCYRCLYPEPPPPGLVPSCAEGGVLGVLPGVIGTIQATEAIKLLTGIGEPLIGRLLLYDALAMRFRELKLRRNPDCPVCGDHPTVTELIDYQQFCGISPEEAHRDATIEITPAEVADWLHSDNPPFLLDVREPNEWEICHIPGAVRISVNELAERMNELDSAVEMVVYCRSGVRSARAVELLRQAGFRKVKNMAGGILRWSDEVDPSVPKY
>NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase
MTYWRLHYHLIWSTQDRLPTLTGEREKMFYGVLYRKAAELGVKIHAAGNVEDHVHVVASIPPKLAVAECVRHLKGASAYAINRMPDSDGQFKWQSGYGALSIGEQSLETVMAYAARQKEHHANKTTIDAYEESHDEE
>NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M
MQLSLGLNETLGTDLWRACDILRRDNNVGGVMQYTEHLAWLLFLKFFDQEEKKRAQEAAFRGETYIPVLPPDLAWDAWAGPEALQKWDSSRGQLVAFVRGRLLPGLASLNGSPLANTIARLFSDESIGDQTVVRNVPVCASDYNLKDVLTIINAIDFERDDHFFTITRFYEDLLARMGQENQIAGEFHTPRPIIRFMVEVIDPQIGETVYDPACGSAGFLAQAHLWMEKNAHTLEDLETLQQRTFYGREKKALAALLGTMNLILHGVTTPNIVRANTLEESVKTGVAERFDIVLTNPPFGGKEGRHIQQNFPVPGNATELLFLQHIIKKLKPTANARAAVVVPEGTLFRSGAFAEVKRMLLDDFHLFAVISLPPGAFAPYSDVKTALLFFRRTEGSHIRNPLARNETWYYELPLPAGLKKFSKGSPILDEHFTEARRLWEQWKRWLDGEGERPFPLAVGVRTAGETASRPYWVETLDDLRARGYDLSARNPYRGERATLPRPAELTVRLLERQRELRAAMERLHALVSNGEEEE
>NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit
MMERWELPKGWGWKRLKTLVTVNYGKGLSEKQRKAGNVPVYGANGVVGFHDTSITKGQTIVIGRKGSAGAVNWSEIACWPIDTTFFIDEFPEILYPQFLYQFLRSQQIDRLQQSAAIPGLNRDVLYSVEVPIPYPDDPAHSLAEQRRIVARLELLLGETRAMREDIQAMRRDLAQVMESALAEVFPNPNGEMPKGWGWKSIDDLFELQQGASMSPRRRQGRNPQPFLRTKNILWGEVDTSDVDVMDFTEDEIERLKLRKGDLLICEGGDVGRAAVWEDQLPLVMYQNHIHRLRRKSDDADPKFYVYWMKAAYQLFKIYQGEESRTAIPNLSGRRLKNFLVPTTSLTEQRRIVAYLEHIAEEIRAMDDLLAQDLRDIEVLEQSILAAAFRGEV
>NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase
MRLLRFYIDSYRVLSKLDVRFDPGAPQDNQERPYHLDFLVGVNGTGKSTVLRLLARIFRGVTVSFEELSDLPFILEYYREGDRHKKIYIANIHRTPDGAMQSLDRYFVCTAGGLDAPYDVESPDDEHLKDVVESELLPERIIAYTTGSEDEWLDHDQPDPQANASDRPVQLEMTAAERTLQERTGWSWVQTEKQEGKAPQFRFIRQAQLALVALAGLLLHHETEQQSPLANALKQVNFQGMAGFSLQFNLTYASVNERNQIWQRFGQHASRAIRSGGRVLMVFQPDTFARLLKEHGSALALFEQLADWYSQESPLLTKVNLFLERAKTEKQASPLHTWEWLSDGERSFLGRMCLFMLFGDVESLILLDEPEVHFNDYWKRHIVDTIHQILAGKRKPHRSHLLIATHSSISLSDVPKEDVVVLRRSGMLTDTMSMPSIQTFGADPSDIMVHVFDAPHAMGQHSVNEIEQWLGEAYQKPATERRKFLDEKLKQVSPGYWAYRIRREMVGLP
>NC_009523.1|WP_041332953.1|915113_916367_+|hypothetical-protein
MIHEVRLAHETKYYLWQITCLQIDVLACAVQIQLNFTEQDLQTALKCKMSQQRAMRVANWICRHRDTREGLQTFVTGTQCERRSLVESMQQDVLRLYCGQLNKTLECCFADDRHLPAYQKGAKQFLLAFYDQLSNGIPTDILASNSRKYSRYGREQFFKAYEEANPRQSVCAICDEHRPITIIRGHVHSDIEHYFPKSVYPHLACHPYNLIPICQACNSAHHNKDPLQGRGCSPRRRTLGEVFLPYRNESVRSHGAVIFDGNKPDLYIVERNNNNNSLFYTRVTAFLEIYDVPQRWKSQIHRIGEQLWRQISHFALAEIEKNEALDVFKVKTVLERLLNYFIEDLGATSWDYVLIWYLSYLLVTEIETAIQNHQPPHEVPLIQTLDEIIKNPSPDIPALPAHKVLEISRELYNQGLP
>NC_009523.1|WP_157040961.1|917124_917841_-|phosphoadenylyl-sulfate-reductase
MVPGSWRRTVWSSEELERLNEHFQNQPPEALLTWATQTFHPRLALTCSFSGPSGMVLLDMVARSELNITVIFLDTDLLFPETYELAALAEQRYGIPIQRRRPALSLEEQDRQEGPHLYARDPDRCCHLRKVTPLTETLRNYDAWISGIRRDQSNTRATVHLLEWNTRHNLVKINPLAFWSDRQVWTYIHTHRVPYNPLLDQGYPSIGCTPCTRPASASNPRAGRWVGFAKTECGLHTG
>NC_009523.1|WP_011955511.1|917907_919212_-|hypothetical-protein
MRTVRLFLVAFLLASCAAPQVSIAPPTPIPSPSASATPLPSATPTPTATVTPAPTATATPTPTPSPAPTPTLTPTLLPTPTPAPVRAGPLQFGVAAHLFYTARRLPLQRASEAGFTWIRQQIHWKDLEGPPGRYAWGELPAVIDAVDAAGFRLLITIVRAPAFYSRGTYGMPDKPEHLGNFVEALVQRFPGSIHAIEIWNEQNLAHENGGRVTLEDAGRYVELLCVAYSRIKAIDPSIVVLAGAPSSTGVTDARIAVDDMVYYSAMYTYRDGAIRDCMDAQAVHPGGAANPPDTLWPINPSTARGWTDHPTFYFRHVENVRRLMVAHGLEDIPIWITEFGWATRNTTPGFEYGNQVSFEQQAEYIVGAMRLTEDQYPWVEAMFLWNLNFAILRARSGQPLHEQASFAILNADGSPRPAFLAIQQYLTGEGRGGR
>NC_009523.1|WP_011955512.1|919227_919746_-|adenine-phosphoribosyltransferase
MTTNLADLIRNIPDFPIPGIQFKDITPLLQNGAAFKEVIDTLAARYEGRALDAIVGIESRGFIFSAPLAYRLGVGMIPIRKPGKLPWETFAVEYDLEYGTNKLEMHRDALAPGARVVVIDDVLATGGTVAAACQMVEMAGAVVEEVAFLIELTFLKGRERLAKYPFFSMIQY
>NC_009523.1|WP_011955513.1|919836_920970_-|hypothetical-protein
MDEPNKILSDILGFALERIDHPFITEPNIQSLVESVCRQMSNRACTRLLMACMLAKIHQPQVDPRKPYTAIRGDDAFSGRSYDEKYITRFIIDNRLPLNTTTAFLTPAFRNLDKPLEVDLNLVGRPAYVYKATLELLDYTYRGKVSASDLLSEIVRVLLVIRKENQERIDSLLRALRPEDTLPLSSEEIVILIDQHLKCKNSSRLPVLIVAAAYNAMEEIIGERILPLQSHNAADEQTGSLGDVEVCLENDDHIVTVYEMKMRRVTIDDINFALEKIKSAHHKIHNYIFITTETIDDNIMAFAAGCYERTGGTEVAILDCISFLRHFLHLFHRSRTRFLDAYQKLVLEEPESAVSQPLKEAFLALRRAAQDRGEDRD
>NC_009523.1|WP_011955514.1|920980_921856_-|DNA-adenine-methylase
MKRNSVPSALVRRERKRVIAFGWYGGKYSHLDWLLPLLPFCHHYCEPFGGSAAVLFNREPSPVETYNDIDGEVVNFFRVLRDDPERLVRAIGLTPFSREEFAIACEIDPALDPVERARRFYVRARQVRTGLAQSATLGRWANCKNTSRSGMAGAVSRWLGAVEDLPEIALRLLRVQIENRPAIEVIRLYDSADTLFYCDPPYIHETRGDDNAYAYEMNYEEHCELAMSLNSVRGLVAISGYECDLMNDLYPSSRWYKSVAPSKTIHSTKDKRTEILWTNYNPRTINQKTMF

Crispr_ID: NC_009523_11

• CRISPR_ID: NC_009523_11
• CRISPR_location: 912500-912793
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NC_009523_11

Consensus_repeat	Method
GGAGGGGGATGCGTCTGCCCAGGG	CRT

spacers of NC_009523_11

>11.1|912524|39|NC_009523|CRT
GACAGAAGTGCAGGCTGGTCTAGCTGCTACAACTGGTCT
>11.2|912587|48|NC_009523|CRT
AACAGAAGTGCAAGATGGGGATGCGTCTGCTCAGGGGACAGAAGTGCA
>11.3|912659|39|NC_009523|CRT
GACAGAAGTGCAGGCTGGTCTAGCTGCTACAACTGGTCT
>11.4|912722|48|NC_009523|CRT
AACAGAAGTGCAAGATGGGGATGCGTCTGCCCAGGGAACAGAAGTGCG

CRISPR arrays and Neighbor proteins around NC_009523_11

CRISPR arrays

The CRISPR arrays of NC_009523_11

>merge|NC_009523|11|912500-912793|CRT
GGAGGGGGATGCGTCTGCCCAGGGGACAGAAGTGCAGGCTGGTCTAGCTGCTACAACTGGTCTGGAGGGGGATGCGTCTGCCCAGGGAACAGAAGTGCAAGATGGGGATGCGTCTGCTCAGGGGACAGAAGTGCAGGAGGGGGATGCGTCTGCCCAGGGGACAGAAGTGCAGGCTGGTCTAGCTGCTACAACTGGTCTGGAGGGGGATGCGTCTGCCCAGGGAACAGAAGTGCAAGATGGGGATGCGTCTGCCCAGGGAACAGAAGTGCGAGATGGGGATGCGTCTGCCCAGGC

>NC_009523|11|3|912500-912793|CRT
GGAGGGGGATGCGTCTGCCCAGGG	GACAGAAGTGCAGGCTGGTCTAGCTGCTACAACTGGTCT
GGAGGGGGATGCGTCTGCCCAGGG	AACAGAAGTGCAAGATGGGGATGCGTCTGCTCAGGGGACAGAAGTGCA
GGAGGGGGATGCGTCTGCCCAGGG	GACAGAAGTGCAGGCTGGTCTAGCTGCTACAACTGGTCT
GGAGGGGGATGCGTCTGCCCAGGG	AACAGAAGTGCAAGATGGGGATGCGTCTGCCCAGGGAACAGAAGTGCG
AGATGGGGATGCGTCTGCCCAGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase	unknown	unknown	gnl|CDD|224682
NC_009523.1|WP_041332953.1|915113_916367_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955511.1|917907_919212_-|hypothetical-protein	unknown	unknown	gnl|CDD|273167
NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit	unknown	unknown	gnl|CDD|341142
NC_009523.1|WP_011955514.1|920980_921856_-|DNA-adenine-methylase	unknown	unknown	gnl|CDD|223415
NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase	unknown	unknown	gnl|CDD|235681
NC_009523.1|WP_011955516.1|922776_923613_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl|CDD|234723
NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|226581
NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|275228
NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl|CDD|280533
NC_009523.1|WP_157040960.1|906532_907309_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040959.1|906232_906475_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955517.1|923687_924056_-|hypothetical-protein	unknown	unknown	gnl|CDD|224929
NC_009523.1|WP_157040961.1|917124_917841_-|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl|CDD|234997
NC_009523.1|WP_011955512.1|919227_919746_-|adenine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|235028
NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A	unknown	unknown	gnl|CDD|235502
NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase	unknown	unknown	gnl|CDD|225450
NC_009523.1|WP_011955513.1|919836_920970_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase	unknown	unknown	gnl|CDD|376616
NC_009523.1|WP_011955515.1|921933_922770_-|pantoate--beta-alanine-ligase	unknown	unknown	gnl|CDD|376824

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase	gnl|CDD|224682	COG1768, COG1768, Predicted phosphohydrolase [General function prediction only].	4.28014e-67
NC_009523.1|WP_011955511.1|917907_919212_-|hypothetical-protein	gnl|CDD|273167	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	7.11202e-07
NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit	gnl|CDD|341142	cd17253, RMtype1_S_Eco933I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Escherichia coli O157:H7 EDL933 S subunit (S.Eco933I), Escherichia coli O104:H4 2009EL-2071 S subunit (S.Eco2071ORF3585P) TRD2-CR2, and Streptomyces species SirexAA-E S subunit (S.SspAAEORF2129P) TRD1-CR1 and TRD2-CR2. Escherichia coli O157:H7 EDL933 S subunit (S.Eco933I) recognizes 5'... CACNNNNNNNCTGG ... 3' and Escherichia coli O104:H4 2009EL-2071 S subunit (S.Eco2071ORF3585P) recognizes 5'... RTCANNNNNNNNGTGG ... 3'. The recognition sequence of Streptomyces species SirexAA-E S subunit (S.SspAAEORF2129P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, S.Eco2071ORF3585P TRD1 recognizes RTCA/TGAY and S.Eco2071ORF3585P TRD2 recognizes CCAC/GTGG. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	1.11667e-69
NC_009523.1|WP_011955514.1|920980_921856_-|DNA-adenine-methylase	gnl|CDD|223415	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair].	2.30157e-62
NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase	gnl|CDD|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NC_009523.1|WP_011955516.1|922776_923613_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl|CDD|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	6.33958e-159
NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase	gnl|CDD|226581	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	6.42619e-121
NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase	gnl|CDD|275228	TIGR04435, ABC_transporter, restriction system-associated AAA family ATPase. Members of this family are AAA family ATPases by homology. They occur regularly in a conserved gene neighborhood with the restriction (R), modification (M), and specificity (S) proteins of an apparent type I restriction enzyme system, plus one additional uncharacterized protein. It is not clear whether members of this family contribute to restriction per se, or to another process such as transfer of mobile elements.	4.21686e-19
NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M	gnl|CDD|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	3.06299e-59
NC_009523.1|WP_011955512.1|919227_919746_-|adenine-phosphoribosyltransferase	gnl|CDD|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	7.14053e-100
NC_009523.1|WP_157040961.1|917124_917841_-|phosphoadenylyl-sulfate-reductase	gnl|CDD|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.70913e-94
NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A	gnl|CDD|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase	gnl|CDD|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	1.2224e-101
NC_009523.1|WP_011955517.1|923687_924056_-|hypothetical-protein	gnl|CDD|224929	COG2018, COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only].	3.43363e-28
NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase	gnl|CDD|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	7.53631e-34
NC_009523.1|WP_011955515.1|921933_922770_-|pantoate--beta-alanine-ligase	gnl|CDD|376824	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (EC:6.3.2.1) catalyzes the formation of pantothenate from pantoate and alanine.	1.02019e-166

Protein sequences

>NC_009523.1|WP_011955506.1|910211_911390_+|restriction-modification-system-DNA-specificity-subunit
MMERWELPKGWGWKRLKTLVTVNYGKGLSEKQRKAGNVPVYGANGVVGFHDTSITKGQTIVIGRKGSAGAVNWSEIACWPIDTTFFIDEFPEILYPQFLYQFLRSQQIDRLQQSAAIPGLNRDVLYSVEVPIPYPDDPAHSLAEQRRIVARLELLLGETRAMREDIQAMRRDLAQVMESALAEVFPNPNGEMPKGWGWKSIDDLFELQQGASMSPRRRQGRNPQPFLRTKNILWGEVDTSDVDVMDFTEDEIERLKLRKGDLLICEGGDVGRAAVWEDQLPLVMYQNHIHRLRRKSDDADPKFYVYWMKAAYQLFKIYQGEESRTAIPNLSGRRLKNFLVPTTSLTEQRRIVAYLEHIAEEIRAMDDLLAQDLRDIEVLEQSILAAAFRGEV
>NC_009523.1|WP_011955505.1|908610_910215_+|type-I-restriction-modification-system-subunit-M
MQLSLGLNETLGTDLWRACDILRRDNNVGGVMQYTEHLAWLLFLKFFDQEEKKRAQEAAFRGETYIPVLPPDLAWDAWAGPEALQKWDSSRGQLVAFVRGRLLPGLASLNGSPLANTIARLFSDESIGDQTVVRNVPVCASDYNLKDVLTIINAIDFERDDHFFTITRFYEDLLARMGQENQIAGEFHTPRPIIRFMVEVIDPQIGETVYDPACGSAGFLAQAHLWMEKNAHTLEDLETLQQRTFYGREKKALAALLGTMNLILHGVTTPNIVRANTLEESVKTGVAERFDIVLTNPPFGGKEGRHIQQNFPVPGNATELLFLQHIIKKLKPTANARAAVVVPEGTLFRSGAFAEVKRMLLDDFHLFAVISLPPGAFAPYSDVKTALLFFRRTEGSHIRNPLARNETWYYELPLPAGLKKFSKGSPILDEHFTEARRLWEQWKRWLDGEGERPFPLAVGVRTAGETASRPYWVETLDDLRARGYDLSARNPYRGERATLPRPAELTVRLLERQRELRAAMERLHALVSNGEEEE
>NC_009523.1|WP_011955504.1|907774_908188_+|IS200/IS605-family-transposase
MTYWRLHYHLIWSTQDRLPTLTGEREKMFYGVLYRKAAELGVKIHAAGNVEDHVHVVASIPPKLAVAECVRHLKGASAYAINRMPDSDGQFKWQSGYGALSIGEQSLETVMAYAARQKEHHANKTTIDAYEESHDEE
>NC_009523.1|WP_157040960.1|906532_907309_+|hypothetical-protein
MDAIAPQGLSCPQKGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSRPQKGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSCPQRGLQPALIARTNRGAGVTQGSTAKSVGGRRDRRAEALPHIVQALRAGSTRRPFGRWTVMDAIAPQGLSRPQKGLQPALIAHRPHESRRGRHAGIDGKIGRRAS
>NC_009523.1|WP_157040959.1|906232_906475_-|hypothetical-protein
MRQGFSPPITADYDCNPQGLHDVRQGFSPPITADYDCNPQGLHDVRQGFSPSITADYDCSPQGLHDVRQGFSPPITLIHR
>NC_009523.1|WP_011955502.1|903522_906222_+|DEAD/DEAH-box-helicase
MPRNESDTRAQLVDPLLNRAGWTRSQVTREHYYRPDWQYTPGRVILRGGRVEREKPRVVDYLLRYTEAFPIAVVEAKAEDLPAVAGLEQAKRYARENNLMFAYATNGHEIIEWDGFTDTTRELKEFPSPDELWRRWELNTGVHSPKAAGRTIAELRPLYNAAVAAARQRNPLLHPYAPSSLTRGSEPRYFQEAAIRETLVRVMRGQKRILLTMATGTGKTFTAMQIVWKLVKSGWLHQQKGRAGKILFLADREVLRNQAYNAFSPFASDHGDPRFMLDGKRRLSLQYDLYFGIYQTLWATDPRGKRLFEQFPHDFFDVVIVDEAHRSGFGTWKEILDHFESAIHLGMTATPRQDENVDTYAYFCAEEPAIPLDPQDPSKGVLHQAAYTYSLSQGIEDGFLATYKVHRVLTSIDKDGLHISRVLEQGAEVIVPEDAKVREEYYTPNFEREIRLPDRTHTLVKHLAKLLRQFGPLHKTMVFCVDVEHAREVARLLNNEFASLGLGHDYAVPIVSEEGEQAQRWLNQFQDSDRKTPVVATTAELLSTGVDVPACRNIVFMKTISSPILFKQIIGRGSRLDPATGKLWFRIIDYTNATRLLDPRWDCPTRPVQVAPDPNAQTGIAQGTVRLAKSSNVIQGASVAVMAGPNDQRGPILTDENGQYRFENLPVGEISIVVYAPRFNRQQKHINTQDSTPVTLDFELSPIQQSGRQEIVVKNLQVTIAEEATFLVAGLNEPLTLEQYVDYSREKTRALISSWEKLVQIWREEKQRRQAQDELQHVSVYPDVLAEVLDIRQTDPFDVLAYIAFGRHPILTRDQRAQAFLQQHADWLKAFPDQQRRVIEALLEQYRLSGVEEMVNPRVFRLPAFKPLGGLKGVSQQFGGGEALRQTVMELQRRLYSFG
>NC_009523.1|WP_011955501.1|902518_903250_-|metallophosphoesterase
MRSMVWSISDLHLSFARPKPMDIFGSRWKDHPERIAAAWRARVKPDDVVLLAGDTSWAMKLQDALVDLQWIAALPGRKIISRGNHDYWWSSERTNRVRRSLPPGIDILEASAIDIGEAVVCATRGWNTPETPGFQESTDRPYYERELMRLDTALAAAQHLASGKRPIIVMIHFPPFAGRRPTEFARRIAAAKAAACVYGHLHRPEDWAVATQGLVDGVYYQLTSCDYLGFGPVAVRGLRPVVE
>NC_009523.1|WP_011955500.1|899924_902396_-|DNA-gyrase-subunit-A
MEIGIVRPRNITDEMRSAYLDYAMSVIVSRALPDARDGLKPVQTRILYGMWDMGIRANQPFKKCARIVGEILGKMHPHGDSAVYDALVRLAQPWNMRYPLVEGQGNFGSIDGDPPAAMRYTEARLTPIAEEMLADIEKNTVDFRDNFDGLYREPVVLPARIPNLLLNGAAGIAVGMATNIPPHNLNEVCDAITHLIDNPDATIEDLARIMPGPDFPTAGMILGTEGIMNAYSTGRGHITIRAKAHIEEAARGAFHIVVTELPYQVNKARLQERIAELARDRKIEGIRDVRDESDRSGMRLVIILKQDAQPKKVLNALYKHTQMQTTFGVNMLALVEGGRQPRLLTLKRLLQEYIDHRREVIRRRTEFDLDKARARAHILEGLKIAIDNLDAVIATIRNSRSRDHARTNLMNGFALSEAQANAILEMQLGRLAALERQRIEEEYREVIQLIGELEDILANPRKILHLIKQDLADLKAKYGDPRRTRIIPDADGEVSDEDLIPDVRVLITLTDRGYVKRQSPDIYRTQRRGGRGIRGATIREQDVVRHILAASTMDDLLFFTDRGKVYQIKAHELPDASRTAKGLPLVNLIALEPGEQVTSVLAVPDFEKAEYLIMATVRGKIKRTSIKEYSQVRSNGLIAIGLEDGDELGWVAMTQGHEDVLLTTARGQTIRFRQEEVRPMGRPATGVIGIALAEGDRVVSMDLARENAALLVVTANGYGKRTALEEYPVKGRATGGVITIRLRPGDEVAVAHVVHEHSLLTFITESGMVMRTEADGISMFGRNTQGVTIVNLAPNDRVAALCVEEPDESEERSDRVLIDPTRG
>NC_009523.1|WP_011955498.1|895500_898710_+|isoleucine--tRNA-ligase
MAFQPVDTRVNFPRLEEQVLDLWQTRRIVERSLESGDKPFVFYEGPPTANGRPGIHHAISRIFKDVICRYRAMQGYRIIGRREGWDTHGLPVEIEVEKKLGFSGKPDIEKYGVAEFNAQCRKSVWEYIQDWRQFTRRIAYWVSDDAYITYENDYIESLWWIFRQLWDRGLLFRDYKVSMHCPRCGTSLSDHEVSLGFRDDVDDPSVWVKFRVRETNQEALRGAAFLAWTTTPWTLPANVALAVKPDATYVLASFDGERLVLAEALVHTVLGDGVTIEQTFRGADLVGTRYENLFDGVPAPGDTVDWSRAYTVVADDFVSLEDGTGIVHIAPAYGDLEIGRKYGLPTLFSVDLSGNVLPEFASLGFAGKFFKQADPDITRNLRTRGLLLKSGRVKHSYPFCWRCDTPLLYYAKRSWYIRTTAMKDRLVANNRLINWVPEHIREGRFGNWLENNIDWAVSRERYWGTPIPIWVAEDGYAECIGSLAELEQKVGRSLKDLDLHRPYVDELTWVDPQHGLMRRIPDVADCWFDSGAMPVAQWHYPMENAEIYELAKQADYICEAVDQTRGWFYTLHALSTLLFDRPAFKNVICLGHILDAEGQKMSKSRGNVVDPWMVMNEHGADALRWYLFTAAPPGSPRRFSAGLVAESLRKFLLTLWNTYAFFVTYANLDGWSPGNNGVAEHLDPATLTPIDRWALARLNSLVRDVTAAFEAYDVTTAGRAIEDFVDELSNWYVRRNRRRFWKSEHDRDKQAAYATLYTCLLTVAKLVAPFIPFVADAIYRNLVGLEAQEASPDTPESVHLAAWPVVNEALLDDRLVDDTEVLLKAVSVGRAARRAAGIKVRQPLREMWVRAPTPAALEGLRRFEAELREELNVKAVRYLDSATSLVEYRFKPNLRLVGRKYGKLVPALTEALRDLTGDAARAAAQAVEEGRNITLSIEGQTIELLPEEVLVESSSPQGYAVAEDGGVLVALDTTLTPELTMEGLARELVRNIQDARKDAGFAISDRIIVYLGGADGDAEVEAMLRAWGDYVREETLADDLRLCAPPDHVHTTTLELDGGRTLIIGVSRR
>NC_009523.1|WP_011955497.1|894347_895223_+|sulfurtransferase
MTIDHLVDPAWLLEHLNDPDIRIADLRWYLLEPGRGRIEYLEAHIPGTVYLDIDTDLAAPPFQGPGRHPIPSPEAFAATASRAGIAPTTHVIAYDSVGGAYAARLWWLLRYFGHERVSLLDGGWPAWTAAGFPVETGDVAPQPTVFVPRPNRLMVVDADAVETLRHNPRALIIDVRAPERYQGIAEPLDPRAGHIPGAVSAPYADAIDTNGRLLPADALRARYAALGADRAETIVCYCGSGVTAAHTILALERAGWKNVLLYEGSWSDWSRDPARPAACDIIPCKGCDGDE
>NC_009523.1|WP_011955508.1|913567_915097_+|AAA-family-ATPase
MRLLRFYIDSYRVLSKLDVRFDPGAPQDNQERPYHLDFLVGVNGTGKSTVLRLLARIFRGVTVSFEELSDLPFILEYYREGDRHKKIYIANIHRTPDGAMQSLDRYFVCTAGGLDAPYDVESPDDEHLKDVVESELLPERIIAYTTGSEDEWLDHDQPDPQANASDRPVQLEMTAAERTLQERTGWSWVQTEKQEGKAPQFRFIRQAQLALVALAGLLLHHETEQQSPLANALKQVNFQGMAGFSLQFNLTYASVNERNQIWQRFGQHASRAIRSGGRVLMVFQPDTFARLLKEHGSALALFEQLADWYSQESPLLTKVNLFLERAKTEKQASPLHTWEWLSDGERSFLGRMCLFMLFGDVESLILLDEPEVHFNDYWKRHIVDTIHQILAGKRKPHRSHLLIATHSSISLSDVPKEDVVVLRRSGMLTDTMSMPSIQTFGADPSDIMVHVFDAPHAMGQHSVNEIEQWLGEAYQKPATERRKFLDEKLKQVSPGYWAYRIRREMVGLP
>NC_009523.1|WP_041332953.1|915113_916367_+|hypothetical-protein
MIHEVRLAHETKYYLWQITCLQIDVLACAVQIQLNFTEQDLQTALKCKMSQQRAMRVANWICRHRDTREGLQTFVTGTQCERRSLVESMQQDVLRLYCGQLNKTLECCFADDRHLPAYQKGAKQFLLAFYDQLSNGIPTDILASNSRKYSRYGREQFFKAYEEANPRQSVCAICDEHRPITIIRGHVHSDIEHYFPKSVYPHLACHPYNLIPICQACNSAHHNKDPLQGRGCSPRRRTLGEVFLPYRNESVRSHGAVIFDGNKPDLYIVERNNNNNSLFYTRVTAFLEIYDVPQRWKSQIHRIGEQLWRQISHFALAEIEKNEALDVFKVKTVLERLLNYFIEDLGATSWDYVLIWYLSYLLVTEIETAIQNHQPPHEVPLIQTLDEIIKNPSPDIPALPAHKVLEISRELYNQGLP
>NC_009523.1|WP_157040961.1|917124_917841_-|phosphoadenylyl-sulfate-reductase
MVPGSWRRTVWSSEELERLNEHFQNQPPEALLTWATQTFHPRLALTCSFSGPSGMVLLDMVARSELNITVIFLDTDLLFPETYELAALAEQRYGIPIQRRRPALSLEEQDRQEGPHLYARDPDRCCHLRKVTPLTETLRNYDAWISGIRRDQSNTRATVHLLEWNTRHNLVKINPLAFWSDRQVWTYIHTHRVPYNPLLDQGYPSIGCTPCTRPASASNPRAGRWVGFAKTECGLHTG
>NC_009523.1|WP_011955511.1|917907_919212_-|hypothetical-protein
MRTVRLFLVAFLLASCAAPQVSIAPPTPIPSPSASATPLPSATPTPTATVTPAPTATATPTPTPSPAPTPTLTPTLLPTPTPAPVRAGPLQFGVAAHLFYTARRLPLQRASEAGFTWIRQQIHWKDLEGPPGRYAWGELPAVIDAVDAAGFRLLITIVRAPAFYSRGTYGMPDKPEHLGNFVEALVQRFPGSIHAIEIWNEQNLAHENGGRVTLEDAGRYVELLCVAYSRIKAIDPSIVVLAGAPSSTGVTDARIAVDDMVYYSAMYTYRDGAIRDCMDAQAVHPGGAANPPDTLWPINPSTARGWTDHPTFYFRHVENVRRLMVAHGLEDIPIWITEFGWATRNTTPGFEYGNQVSFEQQAEYIVGAMRLTEDQYPWVEAMFLWNLNFAILRARSGQPLHEQASFAILNADGSPRPAFLAIQQYLTGEGRGGR
>NC_009523.1|WP_011955512.1|919227_919746_-|adenine-phosphoribosyltransferase
MTTNLADLIRNIPDFPIPGIQFKDITPLLQNGAAFKEVIDTLAARYEGRALDAIVGIESRGFIFSAPLAYRLGVGMIPIRKPGKLPWETFAVEYDLEYGTNKLEMHRDALAPGARVVVIDDVLATGGTVAAACQMVEMAGAVVEEVAFLIELTFLKGRERLAKYPFFSMIQY
>NC_009523.1|WP_011955513.1|919836_920970_-|hypothetical-protein
MDEPNKILSDILGFALERIDHPFITEPNIQSLVESVCRQMSNRACTRLLMACMLAKIHQPQVDPRKPYTAIRGDDAFSGRSYDEKYITRFIIDNRLPLNTTTAFLTPAFRNLDKPLEVDLNLVGRPAYVYKATLELLDYTYRGKVSASDLLSEIVRVLLVIRKENQERIDSLLRALRPEDTLPLSSEEIVILIDQHLKCKNSSRLPVLIVAAAYNAMEEIIGERILPLQSHNAADEQTGSLGDVEVCLENDDHIVTVYEMKMRRVTIDDINFALEKIKSAHHKIHNYIFITTETIDDNIMAFAAGCYERTGGTEVAILDCISFLRHFLHLFHRSRTRFLDAYQKLVLEEPESAVSQPLKEAFLALRRAAQDRGEDRD
>NC_009523.1|WP_011955514.1|920980_921856_-|DNA-adenine-methylase
MKRNSVPSALVRRERKRVIAFGWYGGKYSHLDWLLPLLPFCHHYCEPFGGSAAVLFNREPSPVETYNDIDGEVVNFFRVLRDDPERLVRAIGLTPFSREEFAIACEIDPALDPVERARRFYVRARQVRTGLAQSATLGRWANCKNTSRSGMAGAVSRWLGAVEDLPEIALRLLRVQIENRPAIEVIRLYDSADTLFYCDPPYIHETRGDDNAYAYEMNYEEHCELAMSLNSVRGLVAISGYECDLMNDLYPSSRWYKSVAPSKTIHSTKDKRTEILWTNYNPRTINQKTMF
>NC_009523.1|WP_011955515.1|921933_922770_-|pantoate--beta-alanine-ligase
MRVITTIAELRTARAALQGTTGLVPTMGYLHEGHLSLVRRARAENDHVITTIFVNPTQFGPSEDLTRYPRDLPRDLALLEAEKVDLVFAPDVSEMYPPGFGTFIDVGPIAAPLEGAARPGHFRGVATVVCKLFAITSPHRAYFGQKDAQQTLVIRRMTLDLNLPVEIVVCPIVREPDGLAMSSRNVYLNPEERRAATVLFRALRAVQERFAAGERNGDALRAAMRAVIDAEPLARADYVSVADLDDLHELETVTNRALASLAVRIGTTRLIDNCVLEA
>NC_009523.1|WP_011955516.1|922776_923613_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MRKTITDIQQMKVRGEPIAMLTAYDATIAALFDAAGVPMLLVGDSLGDNVLGFSSTVPVTIEDMVRHTAAVARGAQSALIVADMPFLTYATLEMAVAAARRLMQEGGAQAVKLEGGQAMVPIVRRLVECGVPVMGHLGYTPQSVHLFGKARVQGRSAAAARRMIEDALALEAAGAFALVLELVPAQLAAAITERLRIPTIGIGAGPHCDGQVQVFTDILGLRDDFKPRHTRRFAELAPLIRSAVAAYVAAVGERSFPTAEHSSRMDEAELREALEGLS
>NC_009523.1|WP_011955517.1|923687_924056_-|hypothetical-protein
MASRTEEMVRHLKALQMNTPDIEASAVVSVDGLIMASALPADVEEDRVSAMSAAMLSLGERIANELKRGQLDQVFVRGEEGYVVLVSIGEEAVLTALAASKAKLGLVFLEMKRTANELLSLV

Crispr_ID: NC_009523_12

• CRISPR_ID: NC_009523_12
• CRISPR_location: 983030-983120
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_12

Consensus_repeat	Method
GGCGAAGCCCGCCTGCGCGGGCT	CRISPRCasFinder

spacers of NC_009523_12

>12.1|983053|45|NC_009523|CRISPRCasFinder
GTAGCGGATTATTTACTCAAAGACCATAAGCCCTCGGCTATGCGA

CRISPR arrays and Neighbor proteins around NC_009523_12

CRISPR arrays

The CRISPR arrays of NC_009523_12

>merge|NC_009523|12|983030-983120|CRISPRCasFinder
GGCGAAGCCCGCCTGCGCGGGCTGTAGCGGATTATTTACTCAAAGACCATAAGCCCTCGGCTATGCGAGGCGAAGCCCGCCTGCGCGGGCT

>NC_009523|12|10|983030-983120|CRISPRCasFinder
GGCGAAGCCCGCCTGCGCGGGCT	GTAGCGGATTATTTACTCAAAGACCATAAGCCCTCGGCTATGCGA
GGCGAAGCCCGCCTGCGCGGGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270267
NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224098
NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase	unknown	unknown	gnl|CDD|234660
NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009523.1|WP_011955552.1|970611_971253_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|341393
NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009523.1|WP_011955553.1|971315_972677_-|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl|CDD|180792
NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein	unknown	unknown	gnl|CDD|379079
NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl|CDD|368448
NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224154
NC_009523.1|WP_011955551.1|970132_970534_+|globin	unknown	unknown	gnl|CDD|381280
NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226616
NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps	unknown	unknown	gnl|CDD|236521

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.28674e-84
NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein	gnl|CDD|270267	cd13549, PBP2_Fbp_like_3, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic domain (Fbp) has high affinity for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.42726e-57
NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit	gnl|CDD|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.08185e-39
NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase	gnl|CDD|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	0
NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	4.34834e-54
NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	4.33799e-168
NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.62118e-79
NC_009523.1|WP_011955552.1|970611_971253_+|CBS-domain-containing-protein	gnl|CDD|341393	cd04630, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	4.90762e-35
NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	6.03551e-134
NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.23613e-41
NC_009523.1|WP_011955553.1|971315_972677_-|NADP-dependent-isocitrate-dehydrogenase	gnl|CDD|180792	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed.	0
NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein	gnl|CDD|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	7.92139e-09
NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	3.66206e-31
NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase	gnl|CDD|368448	pfam05448, AXE1, Acetyl xylan esterase (AXE1). This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyze the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan.	1.17711e-156
NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.14598e-21
NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	4.46508e-54
NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.28995e-90
NC_009523.1|WP_011955551.1|970132_970534_+|globin	gnl|CDD|381280	cd14771, TrHb2_Mt-trHbO-like_O, Truncated hemoglobins, group 2 (O); Mycobacterium tuberculosis hemoglobin O like. The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. TrHbs are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). This group includes a Mycobacterium tuberculosis TrHb2, Mt-trHbO, encoded by the Mycobacterium tuberculosis glbO gene, which is expressed throughout the Mycobacterium growth phase. It also includes a TrHb2 from the thermophilic Thermobifida fusca ( Tf-trHb) which has a high thermostability and at the optimal growth temperature for Thermobifida fusca (between 55 and 60 degrees C ), it is capable of efficient O2 binding and release. Tf-trHb shares a relatively slow rate of oxygen binding with Mt-trHbO.	3.61994e-48
NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit	gnl|CDD|226616	COG4132, COG4132, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.72149e-102
NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps	gnl|CDD|236521	PRK09448, PRK09448, DNA starvation/stationary phase protection protein Dps; Provisional.	6.56992e-86

Protein sequences

>NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit
MAPLTQTKTNQPTVTRRSLSWTWVGVAPFFLFVAAFLIWPTLSIIGQSFLDQERRLTLQNILELGRPFIVSSYVYSVQLSAVTAIGGGLLGGLLAYAITIGGLPRPLRDAVLSFSGVASNFAGVPLAFAFIATLGQLGVVTQWLRSIGISLYPAFSLYSFWGLCIVYIYFQIPLMVLIMAPAFEGMRREWREAAESLGANGWQYWRYVGLPILLPSILGTTVLLFGNAFGAHATAFQLTGGGSQGNVVTILIGAQISSDALANPGLGNALALGMIVIMGVSIGLYTWLQRLSARWLQS
>NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit
MLKRFWPWFWFLVGAAYFLVPLYATFDFSLRARRGELSFAAYTSVLNDVRFVESFMFSLQTALATIVISALVIVPTAYWVQLRLPRLRPVIEFFTLLPFVVPAVVLVFSLARTYSRTPLTDSREGLWVLLVGSYVILSFPYMYRAVDTGLRSINIHDLTEAAQSLGAGWFTILTRVIFPNVYVALLSGAFITFAIVMGEFTIAALLAQPAFGPYMNRLASSKVYEPSALAIISFALTWAAIAAIQWFGQGTQARVAGPR
>NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein
MAFLDIVHVQKSFGTTIAVEDFTLAVEQGEFVSFLGPSGCGKTTTLRMVAGFEKPTSGRIVIDGVDVTDMPPNRRNIGMVFQSYALFPNMTVADNIGFGLRIARRPAHEIHARVEELLRIIHMPEFGRRYPYQLSGGQQQRVALARALAIQPKLLLLDEPLSALDAKIRASLRQEIRDIQRQLGITTIYVTHDQEEAMALSDRIVVMSRGKIEQIGTPFEVYNFPATRFVASFVGTLNQIEATVVDAAIGLLAVEGQQFRIARPLPYRSGDTVNIAIRPELIALDGQFNSAMNRLSGTVEDVTFLGSIVRVRLRLAANRLSMDIFNNPHLRPPQPGETITVHFAPEACLAPGDDTPRGANAQPLSASAAEAA
>NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase
MYDAVVVGAGPNGLTAACVLARAGWRVLIIEARETIGGGVSSGEMTLPGFVHDLGSSVHPFGIASPVFRMLELHRFGLRWIHPPAPVAHPLDGGRAVIQERSVRATTAWLGGDGAAYARVMAPLVRSWDRIQPLVLHPLRFPRHPVAAARFGMLALLPVTLLARALFRDEAAPALLAGLGAHSLLPLEAPLTAAPALVLGALGHAVGWPLPQGGAQSIADALATCLRAWSGEIRTGWHVQHIDELPKARAYLFDVSPRQLIQIAGDRLPPGYRRRLQRFRHGPGVFKLDYALDGPVPWRNPACLRAATLHLGGTLEEIAESERAPHRNEHALCPYVLFVQPTLFDPTRAPPGKHTGWAYCHVPHGSMVDMTAAVEAQIERFAPGFCDRILARRAMNCADMEAWNPNLIGGDISGGVPDWRQLITRPTLSLTPYRTPARGIYLCSSSTPPGPGVHGMCGYHAASAALADNG
>NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQLIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTINRKEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein
MKITQRQVVSLTLGIIVVGDIILALALTILQRWDGAAIAAISALATGALLTAHLRGWKHAASVFLILSSVLTGSVMDIFLVEGQASVPLTLIFPPVLGLALVGARGIIVSASLSLGIYVVRVILSGYTVDPVLIVAYVMLVLLILVARAVLNTEVQRAEEARQRAEAAQARIEEQAHALEAANAAQQAQLEEQRRLLDLVATLETPAITLAEGVLFAPVVGHLDSRRSAALTARLLEVAHAQRAHHVIIDISGVSTVDSAVAQALIQTAQALRLLGCSVTLSGISSEVALTLTRQDIALSDIATVRSPQESLRRQQM
>NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein
MTRQLSARLTRYAVALFILFVSAATPGRDGSRPGEWGVRVVHAAPTTITVTTTQDELDGDTSSFENLIDNPGGAGISLREAITAANAMPPGPRLFIHFAIPDTDPGYETGSTIWRIQPGPSALPPLTRGNVSIDGTTQPGASLVSHPVILLDGTNVYEGDRGLNGLTITSAGNVIRGIALILFWDAGVLIEGADASNNVVTGCAIGVLAPDGNSQPNYHGVDIRHGARNNLIGGSTAADRNIISGNDYAGVRIDGSTTMSNTVAGNWIGVDADGTRALSNAYYGIVVSGGAQHNVIGENNVISGNTYGIMVMGANNNRIIGNVIGLAPDGSSPIGNREGGVFLVDGASRNVVGGEAETERNIISGNGYGVFVGQYYVASPPIARLNHIKGNYIGVDASGILPRGNVRQGLFLTEFAESNIIGGDDRRAGNVVAYNGSSGITIEGAANRIASNLIGAGADDATPLGNQRHGALIIGDGNIVGPSNTFAFNQLSGLLIRGDHTFVHENAIHHNARSGICVQGDGSTIVSNTVSLNQGMDIPWDDFDAQRDDCSLIGGIVLTGTLQTLIRSNTIRDNAAPGVIISSGERNRVSSNSITTNADSGIVLLNGANRGIPAPTILAVEQTEVRGVACRNCRVEVFADPNGQGREFLGAVDASSDDGTFSFAFSGSALATLQITATSTDADGNTSAFAVGIGVPAPPPVYTLHLPLVVR
>NC_009523.1|WP_011955553.1|971315_972677_-|NADP-dependent-isocitrate-dehydrogenase
MTTTRNRAPEGDAISIRNGRLYVPDMPIIPYVEGDGTGPDIWRASVRVFDAAVERAYGGRRKLMWYEVLAGEKAFNLTGNWLPDETVEAFRQYLVGIKGPLTTPVGRGIRSLNVALRQLLDLYVCLRPVRYFQGVPSPVKRPELVDMVIFRENTEDIYAGIEYAAGTPEAQKVLDFLRTTFPKDFEKIRFGTAEKAREFLSLLGNGDGEGAVEVGIGIKPVSRLGTERLVAAAIQYAITHRRRSVTFVHKGNIMKFTEGAFRDWGYALAERVFGEHVYTWAQWERTKAEKGEAAANAEQREALAAGAILIKDAIADITLQQVLTRPEEFDVIATLNLNGDYLSDALAAQVGGIGIAPGGNINYITGHAIFEATHGTAPKYANLDRVNPGSVILSGDMMLRYMGWTEAADLIIRALEKTIAQKIVTYDFARLMTGAKEVKTSQFADAMIANMDE
>NC_009523.1|WP_011955552.1|970611_971253_+|CBS-domain-containing-protein
MFTVRGRFDGKTIELLEPPPVDEETFVLVTFLEGPLETAAARESRRAVSVAMFSLDRYAGPLKQRLRAGQPSADAPRPFTVGEIMTRKVISVAPDATAAEAIHIMNKHGITSVLVEPDASGEWGIMTMRDVLQKIVAADRSPEEVAVNELASRPLVYVSPEMSLRDCSKLMIDRNIRRAAVRERDRIVGIISDTDIFQVVEERGWGPMPPTEA
>NC_009523.1|WP_011955551.1|970132_970534_+|globin
MSAEPSIYDRAGGDEPFRRLVDAFYARIERDPLLRPLFPEDLEPGKLHQFLFITQYFGGPPRYNALRGHPRLRARHLPFVIGQAERDAWVNHMRAAIDEVGFPEDVRTALIHYFERTATFMINAGDNRLDLRG
>NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein
MSVQRNNRRWSRRAFLRVAVGAGAGAILAACGQATTTAPTAPAATTAPAEATAPAQLPPPPAPGPLTAADAGGMEKLVELARAEGNLSTIALPDDWANYGEMKKKFLEKYPFIKHEDLNPDASSAQEIEAIKANAGSKGPQAPDVIDVGFTWGNTAKKEGLLQPYKVEKWNEIPDTLKDPEGFWYADYYGVMAFEVNTQVVKNIPQDWSDLLKPEYKGQIALAGDPTGSGQAINAVWAAALGNGGSLDDPMPGLEFFKQLNEMGNLLPVVAKPATIAKGETPIALRWDYNALANRDQNAGNIDIAVVVPKSGSLAGVYVQAISAYAPRPHAARLWMEFLYSDEGQLIWLKGYATPARFEAMRKAGLIPQDLLDKLPKTDAPVAFPTGDQINAAFDKIKSGWPTIVGATVQ
>NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase
MRLHEILKHLCEPAHMPPVNPEIAGVVYDSRAVTPGALFVAYRGFHTDGHAYIPQALERGAAAVVYEDPAWDGRVPVPALRVPNARVALAPLAAAFYGHPGRRMRIVGVTGTDGKTTTTFLTSVALEAGGAITGLMGTVDFKIGERMWTNDSRQSTPEAPEVQALLRDMAEAGCSYAVIEATSHALSARWNRLAGSAFDIAVFTNVTQEHLDFHGTVEQYRRDKARLFEMLAEFNDAAAPFKQRKIAVVNADDPHHRMFLDAAPVSAERLTYAVHAHADVRAEDVRSTRDGLRFRVTTPWGAADARLRLTGDFNVWNALAALTVACAEGVPLERCLAALERVPGVRGRMERIEAGQPFTVLVDYAHTPGAFEKLFRIVRPLTEGQVIAVFGSAGERDRAKRPLQGEIAGRFCDLVIVTDEDPRLEDRAAIIAEIAAGAEAVGKRIGETCLCIPDRALAIRTAFAYARPGDIVLLLGKGHEGSIIYGTTPVPWDEAAEARRALAELGYGG
>NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein
MSIHEDAIELRAVSKWFNRETPAVQQVSLRAPRGTLLALLGPSGCGKTTTLRLIAGLEAPDTGEIYLDGRRVAGGGDWAPPERRRVGMVFQDYALFPHLSVRENIAFGLNGRPPRERAMRVAELLALAGLEDLADRYPHQLSGGQQQRVALARALAPAPQVILLDEPFSNLDAVLRKATREEVRRILRQSGATAVFVTHDQEEAFSIADMVAVMRQGRIEQIGVPHDIYLRPATRAVAMFVGEANFVPARASGRCAECVLGRVPLAAPRDGPVEVMVRPEALDLHPDATGCGLIEEIVFFGHDQLIGIRMCDGSLIQARTGPRTDIAPGVRVVVRVQGEAVAFPCERGATAT
>NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase
MAFFDLSFDELQRYLPPREEPPDFDAFWQATLEEARMYPLDVRFEPYDAGLTTVETFDVTFRGYGGQPIKGWLLLPRHASHPLPAVVEYIGYGGGRGFPTDWLLWSAAGYAHLVMDTRGQGSAWLKGDTPDPEPEGSNPHHPGFMTRGITSPYTYYYRRVFTDAVRAIEAARAHPAIDAGRIAVTGGSQGGGIALAVAGLVHDIRATMPDVPFLCHYRRATEITDANPYYEIARYCKVHRDRVEAVFQTLSYFDGVNFAARAQAPALFSVGLMDDVCPPSTVYAAYNHYDGPKQIRVYRYNQHEGGGTFQNQEKIRFLRTVLGG
>NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein
MTASSGADPISALSHQMADAVERIRRSLVMVNGRQRQPASGIIIAADQVLTADHVLERDDDLTIQTDDGRTLAARLVGRDQTSDLALLRVDALVGEIAAQALDPARVGQFVLAVGRPSPGGPMASLGIVSAVGGPLRTRRGMVEQVIQTDATPYPGFSGGALIDATGAVLGLFTTGLIGGVALALPAPLAWRIAHTLASQGHVRRGFLGISSQPVTIPAGQRAGRNQERGLLIVRVEPDSPASRAGLLIGDILVGIDGVVLNDTDDLQAVLSGDRVGATVPAEIIRGGALMTLTVTIGQRKGS
>NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein
MTQVFYRAPDIVAGFADRAERARRSVVHLHGAGRGVGTGVVWQSGGVVLTNDHVVAGTGGRLRMQTLDGRDLPVRVAARNPDLDLALLHTSADDLPPASVGDSSRLRVGELVFAIGHPWGQPWVVTAGIVSGLGEAETRNGQRVAFIRSDVRLAPGNSGGPLLDARGRVIGINAMVFGGDLAVAIASHVVERWLNDSQGRRARLGVGVQSLPLPEGVLNGRSRGLLVVSLEPGSPAEQAGILVGDLLLHADTVSLEQPEDLHRALQHTDGTLRLRLLRAGDIRVIDVTPGAGS
>NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor
MIRVLIVAPTPALRAGLRALVAEANVEIVGETVSLTTPASIPPDTDVILAADDSVLTEADRALGEEPRYAVLLLSDDERQADVLRRLPLTAWGLLSHDAGAAELAAAIQAVAQGLIVFASELALRLLHRRPLSVAEPVGEPLTARERDVLELVSQGLSNKQIAQKLQISEHTVKFHLSSLFAKLGVSSRTEAVNRGARQGIITL
>NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps
MPEARTFPTRVGIPAETRRRMINLLNQHLADAFDLYSQTKQAHWNVKGLQFIALHELFDKLAEDLEEAIDDMAERVTALGGTALGTVRIVAASSSIAEYPLDITDGPQHIEALAERFGRLAGMVRSAIDTAAEAGDADTADLFTEVSRMLDKNLWFLEAHVQA
>NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease
MSSVAMPAPKRHHIHWSRMVVYGVMIIFLLFFLLPVYLLLITSFKSFDQVSLSRMWELPTGFSLESFDRAWNGGEGVIGMRGSFWNSVQLVVPATVISCILGSLNGYVLSKWRFPGSETLFTLILFGMFIPYQSVLVPLVEVLREIRLYATIPGLILVHVVYGIPITTLIFRNYYATVPNELVEAGKIDGADFFHIYRHVMLPLSAPGFVVVAIWQFTSIWNEFLFGLIITNDPQLRPVTVALQNLSGSQFTQWNVQMAGALMVALPPLLVYIFLGKYFLRGLLAGSLKG
>NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease
MRQAKTLSAHPARRVRWMNRDRAIALLMIAPSALAIAVFVYGFIGWTAYISMTDWRGLAMTTSFVGFDNYLTIFNTGRFQTNIRNLIVFTIFFLAACLIIGLLLAVLIDSRVRFEGFFRSVYIFPMALSFIVTGVVWQWLFAPGNWPNDPTGINLLFKQSGLDFLQAAWTTDTSVVPGWRIEGLRTRIGIPMAMIPVVVAAVWQMSGFVMAMYLAGLRGIPEEIKEAARVDGATEWQVFRTITLPMLQPITLSAVIILGHISLKIFDLIVTMTGGAPGNNTEVPGLYMYEITFKANKFAEGAAVAMVMLVVVALLVVPYLIYNRRTEVER

Crispr_ID: NC_009523_14

• CRISPR_ID: NC_009523_14
• CRISPR_location: 988027-988118
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_14

Consensus_repeat	Method
GGGCTTATGGTCTTTGAGTAATTA	CRISPRCasFinder

spacers of NC_009523_14

>14.1|988051|44|NC_009523|CRISPRCasFinder
TTCTGCCATAGCCCGCGCAGGCGGGCTTTGCCGCGCATAGCCGA

CRISPR arrays and Neighbor proteins around NC_009523_14

CRISPR arrays

The CRISPR arrays of NC_009523_14

>merge|NC_009523|14|988027-988118|CRISPRCasFinder
GGGCTTATGGTCTTTGAGTAATTATTCTGCCATAGCCCGCGCAGGCGGGCTTTGCCGCGCATAGCCGAGGGCTTATGGTCTTTGAGTAAATA

>NC_009523|14|12|988027-988118|CRISPRCasFinder
GGGCTTATGGTCTTTGAGTAATTA	TTCTGCCATAGCCCGCGCAGGCGGGCTTTGCCGCGCATAGCCGA
GGGCTTATGGTCTTTGAGTAAATA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270267
NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224098
NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|224567
NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase	unknown	unknown	gnl|CDD|234660
NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein	unknown	unknown	gnl|CDD|379079
NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224154
NC_009523.1|WP_041332981.1|997055_998117_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|182539
NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226616
NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011955573.1|998118_998808_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl|CDD|368448
NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps	unknown	unknown	gnl|CDD|236521

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein	gnl|CDD|270267	cd13549, PBP2_Fbp_like_3, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic domain (Fbp) has high affinity for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.42726e-57
NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit	gnl|CDD|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.08185e-39
NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein	gnl|CDD|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	1.93829e-40
NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase	gnl|CDD|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	0
NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.28674e-84
NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.23613e-41
NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.62118e-79
NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein	gnl|CDD|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	7.92139e-09
NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.28995e-90
NC_009523.1|WP_041332981.1|997055_998117_-|HAMP-domain-containing-protein	gnl|CDD|182539	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS.	9.03273e-69
NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	6.03551e-134
NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	3.66206e-31
NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit	gnl|CDD|226616	COG4132, COG4132, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.72149e-102
NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.14598e-21
NC_009523.1|WP_011955573.1|998118_998808_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.70195e-87
NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	4.46508e-54
NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	4.34834e-54
NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	4.33799e-168
NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase	gnl|CDD|368448	pfam05448, AXE1, Acetyl xylan esterase (AXE1). This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyze the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan.	1.17711e-156
NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps	gnl|CDD|236521	PRK09448, PRK09448, DNA starvation/stationary phase protection protein Dps; Provisional.	6.56992e-86

Protein sequences

>NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein
MSIHEDAIELRAVSKWFNRETPAVQQVSLRAPRGTLLALLGPSGCGKTTTLRLIAGLEAPDTGEIYLDGRRVAGGGDWAPPERRRVGMVFQDYALFPHLSVRENIAFGLNGRPPRERAMRVAELLALAGLEDLADRYPHQLSGGQQQRVALARALAPAPQVILLDEPFSNLDAVLRKATREEVRRILRQSGATAVFVTHDQEEAFSIADMVAVMRQGRIEQIGVPHDIYLRPATRAVAMFVGEANFVPARASGRCAECVLGRVPLAAPRDGPVEVMVRPEALDLHPDATGCGLIEEIVFFGHDQLIGIRMCDGSLIQARTGPRTDIAPGVRVVVRVQGEAVAFPCERGATAT
>NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase
MRLHEILKHLCEPAHMPPVNPEIAGVVYDSRAVTPGALFVAYRGFHTDGHAYIPQALERGAAAVVYEDPAWDGRVPVPALRVPNARVALAPLAAAFYGHPGRRMRIVGVTGTDGKTTTTFLTSVALEAGGAITGLMGTVDFKIGERMWTNDSRQSTPEAPEVQALLRDMAEAGCSYAVIEATSHALSARWNRLAGSAFDIAVFTNVTQEHLDFHGTVEQYRRDKARLFEMLAEFNDAAAPFKQRKIAVVNADDPHHRMFLDAAPVSAERLTYAVHAHADVRAEDVRSTRDGLRFRVTTPWGAADARLRLTGDFNVWNALAALTVACAEGVPLERCLAALERVPGVRGRMERIEAGQPFTVLVDYAHTPGAFEKLFRIVRPLTEGQVIAVFGSAGERDRAKRPLQGEIAGRFCDLVIVTDEDPRLEDRAAIIAEIAAGAEAVGKRIGETCLCIPDRALAIRTAFAYARPGDIVLLLGKGHEGSIIYGTTPVPWDEAAEARRALAELGYGG
>NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein
MSVQRNNRRWSRRAFLRVAVGAGAGAILAACGQATTTAPTAPAATTAPAEATAPAQLPPPPAPGPLTAADAGGMEKLVELARAEGNLSTIALPDDWANYGEMKKKFLEKYPFIKHEDLNPDASSAQEIEAIKANAGSKGPQAPDVIDVGFTWGNTAKKEGLLQPYKVEKWNEIPDTLKDPEGFWYADYYGVMAFEVNTQVVKNIPQDWSDLLKPEYKGQIALAGDPTGSGQAINAVWAAALGNGGSLDDPMPGLEFFKQLNEMGNLLPVVAKPATIAKGETPIALRWDYNALANRDQNAGNIDIAVVVPKSGSLAGVYVQAISAYAPRPHAARLWMEFLYSDEGQLIWLKGYATPARFEAMRKAGLIPQDLLDKLPKTDAPVAFPTGDQINAAFDKIKSGWPTIVGATVQ
>NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit
MAPLTQTKTNQPTVTRRSLSWTWVGVAPFFLFVAAFLIWPTLSIIGQSFLDQERRLTLQNILELGRPFIVSSYVYSVQLSAVTAIGGGLLGGLLAYAITIGGLPRPLRDAVLSFSGVASNFAGVPLAFAFIATLGQLGVVTQWLRSIGISLYPAFSLYSFWGLCIVYIYFQIPLMVLIMAPAFEGMRREWREAAESLGANGWQYWRYVGLPILLPSILGTTVLLFGNAFGAHATAFQLTGGGSQGNVVTILIGAQISSDALANPGLGNALALGMIVIMGVSIGLYTWLQRLSARWLQS
>NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit
MLKRFWPWFWFLVGAAYFLVPLYATFDFSLRARRGELSFAAYTSVLNDVRFVESFMFSLQTALATIVISALVIVPTAYWVQLRLPRLRPVIEFFTLLPFVVPAVVLVFSLARTYSRTPLTDSREGLWVLLVGSYVILSFPYMYRAVDTGLRSINIHDLTEAAQSLGAGWFTILTRVIFPNVYVALLSGAFITFAIVMGEFTIAALLAQPAFGPYMNRLASSKVYEPSALAIISFALTWAAIAAIQWFGQGTQARVAGPR
>NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein
MAFLDIVHVQKSFGTTIAVEDFTLAVEQGEFVSFLGPSGCGKTTTLRMVAGFEKPTSGRIVIDGVDVTDMPPNRRNIGMVFQSYALFPNMTVADNIGFGLRIARRPAHEIHARVEELLRIIHMPEFGRRYPYQLSGGQQQRVALARALAIQPKLLLLDEPLSALDAKIRASLRQEIRDIQRQLGITTIYVTHDQEEAMALSDRIVVMSRGKIEQIGTPFEVYNFPATRFVASFVGTLNQIEATVVDAAIGLLAVEGQQFRIARPLPYRSGDTVNIAIRPELIALDGQFNSAMNRLSGTVEDVTFLGSIVRVRLRLAANRLSMDIFNNPHLRPPQPGETITVHFAPEACLAPGDDTPRGANAQPLSASAAEAA
>NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase
MYDAVVVGAGPNGLTAACVLARAGWRVLIIEARETIGGGVSSGEMTLPGFVHDLGSSVHPFGIASPVFRMLELHRFGLRWIHPPAPVAHPLDGGRAVIQERSVRATTAWLGGDGAAYARVMAPLVRSWDRIQPLVLHPLRFPRHPVAAARFGMLALLPVTLLARALFRDEAAPALLAGLGAHSLLPLEAPLTAAPALVLGALGHAVGWPLPQGGAQSIADALATCLRAWSGEIRTGWHVQHIDELPKARAYLFDVSPRQLIQIAGDRLPPGYRRRLQRFRHGPGVFKLDYALDGPVPWRNPACLRAATLHLGGTLEEIAESERAPHRNEHALCPYVLFVQPTLFDPTRAPPGKHTGWAYCHVPHGSMVDMTAAVEAQIERFAPGFCDRILARRAMNCADMEAWNPNLIGGDISGGVPDWRQLITRPTLSLTPYRTPARGIYLCSSSTPPGPGVHGMCGYHAASAALADNG
>NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQLIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTINRKEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein
MKITQRQVVSLTLGIIVVGDIILALALTILQRWDGAAIAAISALATGALLTAHLRGWKHAASVFLILSSVLTGSVMDIFLVEGQASVPLTLIFPPVLGLALVGARGIIVSASLSLGIYVVRVILSGYTVDPVLIVAYVMLVLLILVARAVLNTEVQRAEEARQRAEAAQARIEEQAHALEAANAAQQAQLEEQRRLLDLVATLETPAITLAEGVLFAPVVGHLDSRRSAALTARLLEVAHAQRAHHVIIDISGVSTVDSAVAQALIQTAQALRLLGCSVTLSGISSEVALTLTRQDIALSDIATVRSPQESLRRQQM
>NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein
MTRQLSARLTRYAVALFILFVSAATPGRDGSRPGEWGVRVVHAAPTTITVTTTQDELDGDTSSFENLIDNPGGAGISLREAITAANAMPPGPRLFIHFAIPDTDPGYETGSTIWRIQPGPSALPPLTRGNVSIDGTTQPGASLVSHPVILLDGTNVYEGDRGLNGLTITSAGNVIRGIALILFWDAGVLIEGADASNNVVTGCAIGVLAPDGNSQPNYHGVDIRHGARNNLIGGSTAADRNIISGNDYAGVRIDGSTTMSNTVAGNWIGVDADGTRALSNAYYGIVVSGGAQHNVIGENNVISGNTYGIMVMGANNNRIIGNVIGLAPDGSSPIGNREGGVFLVDGASRNVVGGEAETERNIISGNGYGVFVGQYYVASPPIARLNHIKGNYIGVDASGILPRGNVRQGLFLTEFAESNIIGGDDRRAGNVVAYNGSSGITIEGAANRIASNLIGAGADDATPLGNQRHGALIIGDGNIVGPSNTFAFNQLSGLLIRGDHTFVHENAIHHNARSGICVQGDGSTIVSNTVSLNQGMDIPWDDFDAQRDDCSLIGGIVLTGTLQTLIRSNTIRDNAAPGVIISSGERNRVSSNSITTNADSGIVLLNGANRGIPAPTILAVEQTEVRGVACRNCRVEVFADPNGQGREFLGAVDASSDDGTFSFAFSGSALATLQITATSTDADGNTSAFAVGIGVPAPPPVYTLHLPLVVR
>NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase
MAFFDLSFDELQRYLPPREEPPDFDAFWQATLEEARMYPLDVRFEPYDAGLTTVETFDVTFRGYGGQPIKGWLLLPRHASHPLPAVVEYIGYGGGRGFPTDWLLWSAAGYAHLVMDTRGQGSAWLKGDTPDPEPEGSNPHHPGFMTRGITSPYTYYYRRVFTDAVRAIEAARAHPAIDAGRIAVTGGSQGGGIALAVAGLVHDIRATMPDVPFLCHYRRATEITDANPYYEIARYCKVHRDRVEAVFQTLSYFDGVNFAARAQAPALFSVGLMDDVCPPSTVYAAYNHYDGPKQIRVYRYNQHEGGGTFQNQEKIRFLRTVLGG
>NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein
MTASSGADPISALSHQMADAVERIRRSLVMVNGRQRQPASGIIIAADQVLTADHVLERDDDLTIQTDDGRTLAARLVGRDQTSDLALLRVDALVGEIAAQALDPARVGQFVLAVGRPSPGGPMASLGIVSAVGGPLRTRRGMVEQVIQTDATPYPGFSGGALIDATGAVLGLFTTGLIGGVALALPAPLAWRIAHTLASQGHVRRGFLGISSQPVTIPAGQRAGRNQERGLLIVRVEPDSPASRAGLLIGDILVGIDGVVLNDTDDLQAVLSGDRVGATVPAEIIRGGALMTLTVTIGQRKGS
>NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein
MTQVFYRAPDIVAGFADRAERARRSVVHLHGAGRGVGTGVVWQSGGVVLTNDHVVAGTGGRLRMQTLDGRDLPVRVAARNPDLDLALLHTSADDLPPASVGDSSRLRVGELVFAIGHPWGQPWVVTAGIVSGLGEAETRNGQRVAFIRSDVRLAPGNSGGPLLDARGRVIGINAMVFGGDLAVAIASHVVERWLNDSQGRRARLGVGVQSLPLPEGVLNGRSRGLLVVSLEPGSPAEQAGILVGDLLLHADTVSLEQPEDLHRALQHTDGTLRLRLLRAGDIRVIDVTPGAGS
>NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor
MIRVLIVAPTPALRAGLRALVAEANVEIVGETVSLTTPASIPPDTDVILAADDSVLTEADRALGEEPRYAVLLLSDDERQADVLRRLPLTAWGLLSHDAGAAELAAAIQAVAQGLIVFASELALRLLHRRPLSVAEPVGEPLTARERDVLELVSQGLSNKQIAQKLQISEHTVKFHLSSLFAKLGVSSRTEAVNRGARQGIITL
>NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps
MPEARTFPTRVGIPAETRRRMINLLNQHLADAFDLYSQTKQAHWNVKGLQFIALHELFDKLAEDLEEAIDDMAERVTALGGTALGTVRIVAASSSIAEYPLDITDGPQHIEALAERFGRLAGMVRSAIDTAAEAGDADTADLFTEVSRMLDKNLWFLEAHVQA
>NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease
MSSVAMPAPKRHHIHWSRMVVYGVMIIFLLFFLLPVYLLLITSFKSFDQVSLSRMWELPTGFSLESFDRAWNGGEGVIGMRGSFWNSVQLVVPATVISCILGSLNGYVLSKWRFPGSETLFTLILFGMFIPYQSVLVPLVEVLREIRLYATIPGLILVHVVYGIPITTLIFRNYYATVPNELVEAGKIDGADFFHIYRHVMLPLSAPGFVVVAIWQFTSIWNEFLFGLIITNDPQLRPVTVALQNLSGSQFTQWNVQMAGALMVALPPLLVYIFLGKYFLRGLLAGSLKG
>NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease
MRQAKTLSAHPARRVRWMNRDRAIALLMIAPSALAIAVFVYGFIGWTAYISMTDWRGLAMTTSFVGFDNYLTIFNTGRFQTNIRNLIVFTIFFLAACLIIGLLLAVLIDSRVRFEGFFRSVYIFPMALSFIVTGVVWQWLFAPGNWPNDPTGINLLFKQSGLDFLQAAWTTDTSVVPGWRIEGLRTRIGIPMAMIPVVVAAVWQMSGFVMAMYLAGLRGIPEEIKEAARVDGATEWQVFRTITLPMLQPITLSAVIILGHISLKIFDLIVTMTGGAPGNNTEVPGLYMYEITFKANKFAEGAAVAMVMLVVVALLVVPYLIYNRRTEVER
>NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein
MLPTKWLKLISAFAIVTLALAACGAPSTAQPTAAPAQPTTAPAQTGGGKLEIFSWWTNGGEADGLNAMFSIYQQKNPGVEIVNATVAGGAGTNAKTVLKTRLQGGQPPDSWQVHAGKELTAYVDAGQMEPLTQFFKEQGFDKVMPPKLLEQITYNGEIWSVPVNIHRSNVLWYNIKIFQENGLTPPKTIDDFFMVAEALKAKGIIPLAVGGKDKFETPHLFESVLLAVFGPDDYPKLFQPGADWSDLRVRQAAEIAKRMLEYSNSDRSSLGWADAAQLVLDGKAGMTIMGDWAHGYFISKGAKVGVDYGYAAAPGNDGVFMWLSDSFGLAKGAPNPEQAKAWLALCGSREGQDAFNPKKGSIPARTDADVSLYDEYLKYSIKAFGSEKLVPSVVHGAAAPEAYMTEYGNALNVFAGDLDVDAVVQALQDAAKDLK
>NC_009523.1|WP_041332981.1|997055_998117_-|HAMP-domain-containing-protein
MGLWRQLRWRIIAAHMLVVIVGVLTLIVTAETLAARSVDPALLPVFQSAVIQALVVAALAATIAGLATSILLVREILRPLRQLAASSRRIAGGNYDERVTAPLTDELREVAQSFNQMAETLAQVERQRITLIGNVAHELRTPLAGLEGYLEGLLDGVLPGDPETIHAMQHEVRRLRKLVDDLQHLSRVEAGQVAIQPQRFDVVALVHRIVAHLRPQLIEQCLQIAIEAPEKEALAYADPDRTAQVLINLIGNAIRYTPEDGCITIRVRCDPTHVQVIVEDTGIGIPAEALPYLFERFYRVDPSRSRASGGSGIGLTIARHLARAMGGEITAASPGIGKGSVFTLILPRGEIAS
>NC_009523.1|WP_011955573.1|998118_998808_-|response-regulator-transcription-factor
MNATILIIEDEASIRTVARAYLEQAGFRVLLADNGPEGVELARRERPDLVILDLNLPGMDGMEVAARLRQESDVFIIMLTARSEESDRVAGLRIGADDYVIKPFSPRELVARIEAILRRRRSASPVIDATLRFAHLRIDPERREVYVGDQAIDLTTTEFDVLLALARRHGRVLSREQILDLVWGDNFYGTDRVVDVYVGQVRRKLEAVAGVPLIQTVRGVGYKFIDAAV

Crispr_ID: NC_009523_13

• CRISPR_ID: NC_009523_13
• CRISPR_location: 984639-984749
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_13

Consensus_repeat	Method
TCGCCACAACGTCGCGTGATTGACAATCCTTCCCGTC	CRISPRCasFinder

spacers of NC_009523_13

>13.1|984676|37|NC_009523|CRISPRCasFinder
TCTGCGTGCGGGCGGGGACGCCCGCGCTCCCAGGATG

CRISPR arrays and Neighbor proteins around NC_009523_13

CRISPR arrays

The CRISPR arrays of NC_009523_13

>merge|NC_009523|13|984639-984749|CRISPRCasFinder
TCGCCACAACGTCGCGTGATTGACAATCCTTCCCGTCTCTGCGTGCGGGCGGGGACGCCCGCGCTCCCAGGATGTCGCCACAACGTCGTGTGATTGACAATCCTTCCCGTC

>NC_009523|13|11|984639-984749|CRISPRCasFinder
TCGCCACAACGTCGCGTGATTGACAATCCTTCCCGTC	TCTGCGTGCGGGCGGGGACGCCCGCGCTCCCAGGATG
TCGCCACAACGTCGTGTGATTGACAATCCTTCCCGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270267
NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224098
NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|224567
NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase	unknown	unknown	gnl|CDD|234660
NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009523.1|WP_011955552.1|970611_971253_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|341393
NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009523.1|WP_011955553.1|971315_972677_-|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl|CDD|180792
NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein	unknown	unknown	gnl|CDD|379079
NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl|CDD|368448
NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224154
NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226616
NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps	unknown	unknown	gnl|CDD|236521

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.28674e-84
NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein	gnl|CDD|270267	cd13549, PBP2_Fbp_like_3, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic domain (Fbp) has high affinity for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.42726e-57
NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit	gnl|CDD|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.08185e-39
NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein	gnl|CDD|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	1.93829e-40
NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase	gnl|CDD|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	0
NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	4.34834e-54
NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.23613e-41
NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.62118e-79
NC_009523.1|WP_011955552.1|970611_971253_+|CBS-domain-containing-protein	gnl|CDD|341393	cd04630, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	4.90762e-35
NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	6.03551e-134
NC_009523.1|WP_011955553.1|971315_972677_-|NADP-dependent-isocitrate-dehydrogenase	gnl|CDD|180792	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed.	0
NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein	gnl|CDD|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	7.92139e-09
NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	3.66206e-31
NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase	gnl|CDD|368448	pfam05448, AXE1, Acetyl xylan esterase (AXE1). This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyze the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan.	1.17711e-156
NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.14598e-21
NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	4.46508e-54
NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.28995e-90
NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	4.33799e-168
NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit	gnl|CDD|226616	COG4132, COG4132, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.72149e-102
NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps	gnl|CDD|236521	PRK09448, PRK09448, DNA starvation/stationary phase protection protein Dps; Provisional.	6.56992e-86

Protein sequences

>NC_009523.1|WP_011955561.1|983224_984457_-|extracellular-solute-binding-protein
MSVQRNNRRWSRRAFLRVAVGAGAGAILAACGQATTTAPTAPAATTAPAEATAPAQLPPPPAPGPLTAADAGGMEKLVELARAEGNLSTIALPDDWANYGEMKKKFLEKYPFIKHEDLNPDASSAQEIEAIKANAGSKGPQAPDVIDVGFTWGNTAKKEGLLQPYKVEKWNEIPDTLKDPEGFWYADYYGVMAFEVNTQVVKNIPQDWSDLLKPEYKGQIALAGDPTGSGQAINAVWAAALGNGGSLDDPMPGLEFFKQLNEMGNLLPVVAKPATIAKGETPIALRWDYNALANRDQNAGNIDIAVVVPKSGSLAGVYVQAISAYAPRPHAARLWMEFLYSDEGQLIWLKGYATPARFEAMRKAGLIPQDLLDKLPKTDAPVAFPTGDQINAAFDKIKSGWPTIVGATVQ
>NC_009523.1|WP_011955560.1|981852_982749_-|ABC-transporter-permease-subunit
MAPLTQTKTNQPTVTRRSLSWTWVGVAPFFLFVAAFLIWPTLSIIGQSFLDQERRLTLQNILELGRPFIVSSYVYSVQLSAVTAIGGGLLGGLLAYAITIGGLPRPLRDAVLSFSGVASNFAGVPLAFAFIATLGQLGVVTQWLRSIGISLYPAFSLYSFWGLCIVYIYFQIPLMVLIMAPAFEGMRREWREAAESLGANGWQYWRYVGLPILLPSILGTTVLLFGNAFGAHATAFQLTGGGSQGNVVTILIGAQISSDALANPGLGNALALGMIVIMGVSIGLYTWLQRLSARWLQS
>NC_009523.1|WP_011955559.1|981068_981848_-|ABC-transporter-permease-subunit
MLKRFWPWFWFLVGAAYFLVPLYATFDFSLRARRGELSFAAYTSVLNDVRFVESFMFSLQTALATIVISALVIVPTAYWVQLRLPRLRPVIEFFTLLPFVVPAVVLVFSLARTYSRTPLTDSREGLWVLLVGSYVILSFPYMYRAVDTGLRSINIHDLTEAAQSLGAGWFTILTRVIFPNVYVALLSGAFITFAIVMGEFTIAALLAQPAFGPYMNRLASSKVYEPSALAIISFALTWAAIAAIQWFGQGTQARVAGPR
>NC_009523.1|WP_011955558.1|979923_981042_-|ABC-transporter-ATP-binding-protein
MAFLDIVHVQKSFGTTIAVEDFTLAVEQGEFVSFLGPSGCGKTTTLRMVAGFEKPTSGRIVIDGVDVTDMPPNRRNIGMVFQSYALFPNMTVADNIGFGLRIARRPAHEIHARVEELLRIIHMPEFGRRYPYQLSGGQQQRVALARALAIQPKLLLLDEPLSALDAKIRASLRQEIRDIQRQLGITTIYVTHDQEEAMALSDRIVVMSRGKIEQIGTPFEVYNFPATRFVASFVGTLNQIEATVVDAAIGLLAVEGQQFRIARPLPYRSGDTVNIAIRPELIALDGQFNSAMNRLSGTVEDVTFLGSIVRVRLRLAANRLSMDIFNNPHLRPPQPGETITVHFAPEACLAPGDDTPRGANAQPLSASAAEAA
>NC_009523.1|WP_011955557.1|978547_979960_+|NAD(P)/FAD-dependent-oxidoreductase
MYDAVVVGAGPNGLTAACVLARAGWRVLIIEARETIGGGVSSGEMTLPGFVHDLGSSVHPFGIASPVFRMLELHRFGLRWIHPPAPVAHPLDGGRAVIQERSVRATTAWLGGDGAAYARVMAPLVRSWDRIQPLVLHPLRFPRHPVAAARFGMLALLPVTLLARALFRDEAAPALLAGLGAHSLLPLEAPLTAAPALVLGALGHAVGWPLPQGGAQSIADALATCLRAWSGEIRTGWHVQHIDELPKARAYLFDVSPRQLIQIAGDRLPPGYRRRLQRFRHGPGVFKLDYALDGPVPWRNPACLRAATLHLGGTLEEIAESERAPHRNEHALCPYVLFVQPTLFDPTRAPPGKHTGWAYCHVPHGSMVDMTAAVEAQIERFAPGFCDRILARRAMNCADMEAWNPNLIGGDISGGVPDWRQLITRPTLSLTPYRTPARGIYLCSSSTPPGPGVHGMCGYHAASAALADNG
>NC_009523.1|WP_011955556.1|977199_978162_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQLIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTINRKEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011955555.1|975814_976768_-|STAS-domain-containing-protein
MKITQRQVVSLTLGIIVVGDIILALALTILQRWDGAAIAAISALATGALLTAHLRGWKHAASVFLILSSVLTGSVMDIFLVEGQASVPLTLIFPPVLGLALVGARGIIVSASLSLGIYVVRVILSGYTVDPVLIVAYVMLVLLILVARAVLNTEVQRAEEARQRAEAAQARIEEQAHALEAANAAQQAQLEEQRRLLDLVATLETPAITLAEGVLFAPVVGHLDSRRSAALTARLLEVAHAQRAHHVIIDISGVSTVDSAVAQALIQTAQALRLLGCSVTLSGISSEVALTLTRQDIALSDIATVRSPQESLRRQQM
>NC_009523.1|WP_011955554.1|972933_975069_+|hypothetical-protein
MTRQLSARLTRYAVALFILFVSAATPGRDGSRPGEWGVRVVHAAPTTITVTTTQDELDGDTSSFENLIDNPGGAGISLREAITAANAMPPGPRLFIHFAIPDTDPGYETGSTIWRIQPGPSALPPLTRGNVSIDGTTQPGASLVSHPVILLDGTNVYEGDRGLNGLTITSAGNVIRGIALILFWDAGVLIEGADASNNVVTGCAIGVLAPDGNSQPNYHGVDIRHGARNNLIGGSTAADRNIISGNDYAGVRIDGSTTMSNTVAGNWIGVDADGTRALSNAYYGIVVSGGAQHNVIGENNVISGNTYGIMVMGANNNRIIGNVIGLAPDGSSPIGNREGGVFLVDGASRNVVGGEAETERNIISGNGYGVFVGQYYVASPPIARLNHIKGNYIGVDASGILPRGNVRQGLFLTEFAESNIIGGDDRRAGNVVAYNGSSGITIEGAANRIASNLIGAGADDATPLGNQRHGALIIGDGNIVGPSNTFAFNQLSGLLIRGDHTFVHENAIHHNARSGICVQGDGSTIVSNTVSLNQGMDIPWDDFDAQRDDCSLIGGIVLTGTLQTLIRSNTIRDNAAPGVIISSGERNRVSSNSITTNADSGIVLLNGANRGIPAPTILAVEQTEVRGVACRNCRVEVFADPNGQGREFLGAVDASSDDGTFSFAFSGSALATLQITATSTDADGNTSAFAVGIGVPAPPPVYTLHLPLVVR
>NC_009523.1|WP_011955553.1|971315_972677_-|NADP-dependent-isocitrate-dehydrogenase
MTTTRNRAPEGDAISIRNGRLYVPDMPIIPYVEGDGTGPDIWRASVRVFDAAVERAYGGRRKLMWYEVLAGEKAFNLTGNWLPDETVEAFRQYLVGIKGPLTTPVGRGIRSLNVALRQLLDLYVCLRPVRYFQGVPSPVKRPELVDMVIFRENTEDIYAGIEYAAGTPEAQKVLDFLRTTFPKDFEKIRFGTAEKAREFLSLLGNGDGEGAVEVGIGIKPVSRLGTERLVAAAIQYAITHRRRSVTFVHKGNIMKFTEGAFRDWGYALAERVFGEHVYTWAQWERTKAEKGEAAANAEQREALAAGAILIKDAIADITLQQVLTRPEEFDVIATLNLNGDYLSDALAAQVGGIGIAPGGNINYITGHAIFEATHGTAPKYANLDRVNPGSVILSGDMMLRYMGWTEAADLIIRALEKTIAQKIVTYDFARLMTGAKEVKTSQFADAMIANMDE
>NC_009523.1|WP_011955552.1|970611_971253_+|CBS-domain-containing-protein
MFTVRGRFDGKTIELLEPPPVDEETFVLVTFLEGPLETAAARESRRAVSVAMFSLDRYAGPLKQRLRAGQPSADAPRPFTVGEIMTRKVISVAPDATAAEAIHIMNKHGITSVLVEPDASGEWGIMTMRDVLQKIVAADRSPEEVAVNELASRPLVYVSPEMSLRDCSKLMIDRNIRRAAVRERDRIVGIISDTDIFQVVEERGWGPMPPTEA
>NC_009523.1|WP_011955562.1|984795_986325_+|UDP-N-acetylmuramyl-tripeptide-synthetase
MRLHEILKHLCEPAHMPPVNPEIAGVVYDSRAVTPGALFVAYRGFHTDGHAYIPQALERGAAAVVYEDPAWDGRVPVPALRVPNARVALAPLAAAFYGHPGRRMRIVGVTGTDGKTTTTFLTSVALEAGGAITGLMGTVDFKIGERMWTNDSRQSTPEAPEVQALLRDMAEAGCSYAVIEATSHALSARWNRLAGSAFDIAVFTNVTQEHLDFHGTVEQYRRDKARLFEMLAEFNDAAAPFKQRKIAVVNADDPHHRMFLDAAPVSAERLTYAVHAHADVRAEDVRSTRDGLRFRVTTPWGAADARLRLTGDFNVWNALAALTVACAEGVPLERCLAALERVPGVRGRMERIEAGQPFTVLVDYAHTPGAFEKLFRIVRPLTEGQVIAVFGSAGERDRAKRPLQGEIAGRFCDLVIVTDEDPRLEDRAAIIAEIAAGAEAVGKRIGETCLCIPDRALAIRTAFAYARPGDIVLLLGKGHEGSIIYGTTPVPWDEAAEARRALAELGYGG
>NC_009523.1|WP_011955563.1|986396_987455_+|ABC-transporter-ATP-binding-protein
MSIHEDAIELRAVSKWFNRETPAVQQVSLRAPRGTLLALLGPSGCGKTTTLRLIAGLEAPDTGEIYLDGRRVAGGGDWAPPERRRVGMVFQDYALFPHLSVRENIAFGLNGRPPRERAMRVAELLALAGLEDLADRYPHQLSGGQQQRVALARALAPAPQVILLDEPFSNLDAVLRKATREEVRRILRQSGATAVFVTHDQEEAFSIADMVAVMRQGRIEQIGVPHDIYLRPATRAVAMFVGEANFVPARASGRCAECVLGRVPLAAPRDGPVEVMVRPEALDLHPDATGCGLIEEIVFFGHDQLIGIRMCDGSLIQARTGPRTDIAPGVRVVVRVQGEAVAFPCERGATAT
>NC_009523.1|WP_011955564.1|988550_989525_-|prolyl-oligopeptidase-family-serine-peptidase
MAFFDLSFDELQRYLPPREEPPDFDAFWQATLEEARMYPLDVRFEPYDAGLTTVETFDVTFRGYGGQPIKGWLLLPRHASHPLPAVVEYIGYGGGRGFPTDWLLWSAAGYAHLVMDTRGQGSAWLKGDTPDPEPEGSNPHHPGFMTRGITSPYTYYYRRVFTDAVRAIEAARAHPAIDAGRIAVTGGSQGGGIALAVAGLVHDIRATMPDVPFLCHYRRATEITDANPYYEIARYCKVHRDRVEAVFQTLSYFDGVNFAARAQAPALFSVGLMDDVCPPSTVYAAYNHYDGPKQIRVYRYNQHEGGGTFQNQEKIRFLRTVLGG
>NC_009523.1|WP_011955565.1|989670_990582_+|PDZ-domain-containing-protein
MTASSGADPISALSHQMADAVERIRRSLVMVNGRQRQPASGIIIAADQVLTADHVLERDDDLTIQTDDGRTLAARLVGRDQTSDLALLRVDALVGEIAAQALDPARVGQFVLAVGRPSPGGPMASLGIVSAVGGPLRTRRGMVEQVIQTDATPYPGFSGGALIDATGAVLGLFTTGLIGGVALALPAPLAWRIAHTLASQGHVRRGFLGISSQPVTIPAGQRAGRNQERGLLIVRVEPDSPASRAGLLIGDILVGIDGVVLNDTDDLQAVLSGDRVGATVPAEIIRGGALMTLTVTIGQRKGS
>NC_009523.1|WP_041332978.1|990708_991590_+|PDZ-domain-containing-protein
MTQVFYRAPDIVAGFADRAERARRSVVHLHGAGRGVGTGVVWQSGGVVLTNDHVVAGTGGRLRMQTLDGRDLPVRVAARNPDLDLALLHTSADDLPPASVGDSSRLRVGELVFAIGHPWGQPWVVTAGIVSGLGEAETRNGQRVAFIRSDVRLAPGNSGGPLLDARGRVIGINAMVFGGDLAVAIASHVVERWLNDSQGRRARLGVGVQSLPLPEGVLNGRSRGLLVVSLEPGSPAEQAGILVGDLLLHADTVSLEQPEDLHRALQHTDGTLRLRLLRAGDIRVIDVTPGAGS
>NC_009523.1|WP_011955567.1|991964_992579_+|response-regulator-transcription-factor
MIRVLIVAPTPALRAGLRALVAEANVEIVGETVSLTTPASIPPDTDVILAADDSVLTEADRALGEEPRYAVLLLSDDERQADVLRRLPLTAWGLLSHDAGAAELAAAIQAVAQGLIVFASELALRLLHRRPLSVAEPVGEPLTARERDVLELVSQGLSNKQIAQKLQISEHTVKFHLSSLFAKLGVSSRTEAVNRGARQGIITL
>NC_009523.1|WP_011955568.1|992630_993122_+|DNA-starvation/stationary-phase-protection-protein-Dps
MPEARTFPTRVGIPAETRRRMINLLNQHLADAFDLYSQTKQAHWNVKGLQFIALHELFDKLAEDLEEAIDDMAERVTALGGTALGTVRIVAASSSIAEYPLDITDGPQHIEALAERFGRLAGMVRSAIDTAAEAGDADTADLFTEVSRMLDKNLWFLEAHVQA
>NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease
MSSVAMPAPKRHHIHWSRMVVYGVMIIFLLFFLLPVYLLLITSFKSFDQVSLSRMWELPTGFSLESFDRAWNGGEGVIGMRGSFWNSVQLVVPATVISCILGSLNGYVLSKWRFPGSETLFTLILFGMFIPYQSVLVPLVEVLREIRLYATIPGLILVHVVYGIPITTLIFRNYYATVPNELVEAGKIDGADFFHIYRHVMLPLSAPGFVVVAIWQFTSIWNEFLFGLIITNDPQLRPVTVALQNLSGSQFTQWNVQMAGALMVALPPLLVYIFLGKYFLRGLLAGSLKG
>NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease
MRQAKTLSAHPARRVRWMNRDRAIALLMIAPSALAIAVFVYGFIGWTAYISMTDWRGLAMTTSFVGFDNYLTIFNTGRFQTNIRNLIVFTIFFLAACLIIGLLLAVLIDSRVRFEGFFRSVYIFPMALSFIVTGVVWQWLFAPGNWPNDPTGINLLFKQSGLDFLQAAWTTDTSVVPGWRIEGLRTRIGIPMAMIPVVVAAVWQMSGFVMAMYLAGLRGIPEEIKEAARVDGATEWQVFRTITLPMLQPITLSAVIILGHISLKIFDLIVTMTGGAPGNNTEVPGLYMYEITFKANKFAEGAAVAMVMLVVVALLVVPYLIYNRRTEVER
>NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein
MLPTKWLKLISAFAIVTLALAACGAPSTAQPTAAPAQPTTAPAQTGGGKLEIFSWWTNGGEADGLNAMFSIYQQKNPGVEIVNATVAGGAGTNAKTVLKTRLQGGQPPDSWQVHAGKELTAYVDAGQMEPLTQFFKEQGFDKVMPPKLLEQITYNGEIWSVPVNIHRSNVLWYNIKIFQENGLTPPKTIDDFFMVAEALKAKGIIPLAVGGKDKFETPHLFESVLLAVFGPDDYPKLFQPGADWSDLRVRQAAEIAKRMLEYSNSDRSSLGWADAAQLVLDGKAGMTIMGDWAHGYFISKGAKVGVDYGYAAAPGNDGVFMWLSDSFGLAKGAPNPEQAKAWLALCGSREGQDAFNPKKGSIPARTDADVSLYDEYLKYSIKAFGSEKLVPSVVHGAAAPEAYMTEYGNALNVFAGDLDVDAVVQALQDAAKDLK

Crispr_ID: NC_009523_15

• CRISPR_ID: NC_009523_15
• CRISPR_location: 1004147-1004259
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_15

Consensus_repeat	Method
ATTGTAATCGGTACTGCTTGCTCAATGGCAAACTGATGAG	CRISPRCasFinder

spacers of NC_009523_15

>15.1|1004187|33|NC_009523|CRISPRCasFinder
TTTCGCGGCTTGAGCCTCTCCAAGAGCTTGTGC

CRISPR arrays and Neighbor proteins around NC_009523_15

CRISPR arrays

The CRISPR arrays of NC_009523_15

>merge|NC_009523|15|1004147-1004259|CRISPRCasFinder
ATTGTAATCGGTACTGCTTGCTCAATGGCAAACTGATGAGTTTCGCGGCTTGAGCCTCTCCAAGAGCTTGTGCATTGTAATCGGTACTGCTTGCTCAATGGCAAACTGATGAG

>NC_009523|15|13|1004147-1004259|CRISPRCasFinder
ATTGTAATCGGTACTGCTTGCTCAATGGCAAACTGATGAG	TTTCGCGGCTTGAGCCTCTCCAAGAGCTTGTGC
ATTGTAATCGGTACTGCTTGCTCAATGGCAAACTGATGAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955585.1|1010216_1011293_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009523.1|WP_041332981.1|997055_998117_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|182539
NC_009523.1|WP_157040965.1|1011540_1011705_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955573.1|998118_998808_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009523.1|WP_011955574.1|998782_999307_-|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl|CDD|367130
NC_009523.1|WP_011955580.1|1004567_1006325_-|sulfate-permease	unknown	unknown	gnl|CDD|273284
NC_009523.1|WP_011955584.1|1007785_1008967_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293810
NC_009523.1|WP_011955581.1|1006345_1006843_-|hypothetical-protein	unknown	unknown	gnl|CDD|350353
NC_009523.1|WP_011955588.1|1013307_1015710_-|DNA-translocase-FtsK	unknown	unknown	gnl|CDD|224588
NC_009523.1|WP_011955578.1|1002399_1003092_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223473
NC_009523.1|WP_083763256.1|1009637_1010042_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379326
NC_009523.1|WP_083763255.1|999303_1000005_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|225136
NC_009523.1|WP_011955583.1|1007500_1007752_-|sulfurtransferase-TusA-family-protein	unknown	unknown	gnl|CDD|376492
NC_009523.1|WP_011955587.1|1011749_1013252_+|Ppx/GppA-family-phosphatase	unknown	unknown	gnl|CDD|223326
NC_009523.1|WP_011955576.1|1001069_1002032_+|radical-SAM-protein	unknown	unknown	gnl|CDD|223803
NC_009523.1|WP_085979425.1|1002028_1002376_+|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl|CDD|225062
NC_009523.1|WP_011955582.1|1006868_1007459_-|hypothetical-protein	unknown	unknown	gnl|CDD|379334
NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|224567

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955585.1|1010216_1011293_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.34435e-75
NC_009523.1|WP_041332981.1|997055_998117_-|HAMP-domain-containing-protein	gnl|CDD|182539	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS.	9.03273e-69
NC_009523.1|WP_011955573.1|998118_998808_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.70195e-87
NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.62118e-79
NC_009523.1|WP_011955574.1|998782_999307_-|carboxymuconolactone-decarboxylase-family-protein	gnl|CDD|367130	pfam02627, CMD, Carboxymuconolactone decarboxylase family. Carboxymuconolactone decarboxylase (CMD) EC:4.1.1.44 is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway. In these bifunctional proteins CMD represents the C-terminal domain, pfam00561 represents the N-terminal domain.	8.87031e-10
NC_009523.1|WP_011955580.1|1004567_1006325_-|sulfate-permease	gnl|CDD|273284	TIGR00815, Sulfate_transporter, high affinity sulphate transporter 1. The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions].	1.75171e-139
NC_009523.1|WP_011955584.1|1007785_1008967_-|MBL-fold-metallo-hydrolase	gnl|CDD|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	7.77172e-61
NC_009523.1|WP_011955581.1|1006345_1006843_-|hypothetical-protein	gnl|CDD|350353	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982. This subfamily is composed of bacterial tyrosine-protein phosphatases similar to Neisseria meningitidis NMA1982, which displays phosphatase activity but whose biological function is still unknown.	4.30933e-35
NC_009523.1|WP_011955588.1|1013307_1015710_-|DNA-translocase-FtsK	gnl|CDD|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	3.05202e-156
NC_009523.1|WP_011955578.1|1002399_1003092_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	2.28978e-73
NC_009523.1|WP_083763256.1|1009637_1010042_-|GNAT-family-N-acetyltransferase	gnl|CDD|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.30386e-13
NC_009523.1|WP_083763255.1|999303_1000005_-|methyltransferase-domain-containing-protein	gnl|CDD|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	2.17714e-22
NC_009523.1|WP_011955583.1|1007500_1007752_-|sulfurtransferase-TusA-family-protein	gnl|CDD|376492	pfam01206, TusA, Sulfurtransferase TusA. This family includes the TusA sulfurtransferases.	4.31904e-17
NC_009523.1|WP_011955587.1|1011749_1013252_+|Ppx/GppA-family-phosphatase	gnl|CDD|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	5.8095e-126
NC_009523.1|WP_011955576.1|1001069_1002032_+|radical-SAM-protein	gnl|CDD|223803	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion].	6.40446e-78
NC_009523.1|WP_085979425.1|1002028_1002376_+|metal-sulfur-cluster-assembly-factor	gnl|CDD|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	2.30719e-17
NC_009523.1|WP_011955582.1|1006868_1007459_-|hypothetical-protein	gnl|CDD|379334	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family. DsrE is a small soluble protein involved in intracellular sulfur reduction. The family also includes YrkE proteins.	9.63609e-54
NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.28674e-84
NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein	gnl|CDD|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	1.93829e-40

Protein sequences

>NC_009523.1|WP_011955578.1|1002399_1003092_+|ATP-binding-cassette-domain-containing-protein
MNDNDVLLDVQGVTLVREGRTILRDVDLQVLAGEIHALLGVNGSGKSSLAYAIMGCAEYRPDTGRIVFAGRVVNDLPIYERARLGLTLAWQEPARFDGLPIGDYLTLGRPTMTREELWEALHAVALAPEAYLPRALDRTLSGGERKRIELAAVYAMRPRLAIFDEPDSGVDVLSFGDVQHLVRRMARMGCAVLLITHRNEMATIADRASVMHAGQIVMTGAPEEARLAYP
>NC_009523.1|WP_085979425.1|1002028_1002376_+|metal-sulfur-cluster-assembly-factor
MKGGGCLMSVDRPHDVALEIAVWEALQHVIDPEPGISLLDLGLVQSVAVTDGRAIIELALTTPFCPLVDVMEHMVRAAALDVPGIRDAEVRLVDGPWKPPAAAPWRRWLDETMPP
>NC_009523.1|WP_011955576.1|1001069_1002032_+|radical-SAM-protein
MACVFGPIPSRRLGRSLGVDPVPLKTCNWNCVYCQLGRTRPLTNERRVYVPLPVILNELEQALANRAPDEIDWVTIVGSGEPTLHSEIGELIRAIKRLTTLPLAVITNGALLYLPDVRADLCAADAVMPTLSAGSASVYRALHRPHPETTFERLLEGLIAFRAEYRGKLWVEVMLVRGVNDSEAALRDLASALQRIQPDRIDITLPERPPAEPWVEPPDAGGLMRATAILGAAAHVVHPAEGSFDLRGYATPVEAILAIIARHPMRVTELERALTRWAPDQVHEALRTLEASGAARLIERYGSQFWCAADAFYAPAAPAP
>NC_009523.1|WP_083763255.1|999303_1000005_-|methyltransferase-domain-containing-protein
MRGEASLCGQEQRIVQRSAMHFCNEVVSWLKRRHNRTTHTSMLDHFDILAPVYDRLIGSPDPARLIALLRLPTDGWLLDAGGGTGRVAAGLRPFVGGLIISDQSRQMLRRAREKSTLHPVQAQVQRLPFRDGFFDRILVVDALHHFFDQQAAVRELARVLAPGGRLVIEEPDIHRPAVKLVALAERMALMGSTFLAPEIVRDLLAAQELHAQVAERDRFSAWIVADKPSGGTR
>NC_009523.1|WP_011955574.1|998782_999307_-|carboxymuconolactone-decarboxylase-family-protein
MNRTTTFPRRFYTGLHPFLADVAWLFRHRAQLRLARTLLSPTFRERLMLAVTAVNRCRYCSFAHTRMALAAGVSNAEIARILNQTLDDCPPDEAPALAYAYHWAETDAMPEATARERLICEYGVLRAGAIEAVLRMIRVGNLMGNTFDYLLFRISGGRLGATADDRHERNNPDH
>NC_009523.1|WP_011955573.1|998118_998808_-|response-regulator-transcription-factor
MNATILIIEDEASIRTVARAYLEQAGFRVLLADNGPEGVELARRERPDLVILDLNLPGMDGMEVAARLRQESDVFIIMLTARSEESDRVAGLRIGADDYVIKPFSPRELVARIEAILRRRRSASPVIDATLRFAHLRIDPERREVYVGDQAIDLTTTEFDVLLALARRHGRVLSREQILDLVWGDNFYGTDRVVDVYVGQVRRKLEAVAGVPLIQTVRGVGYKFIDAAV
>NC_009523.1|WP_041332981.1|997055_998117_-|HAMP-domain-containing-protein
MGLWRQLRWRIIAAHMLVVIVGVLTLIVTAETLAARSVDPALLPVFQSAVIQALVVAALAATIAGLATSILLVREILRPLRQLAASSRRIAGGNYDERVTAPLTDELREVAQSFNQMAETLAQVERQRITLIGNVAHELRTPLAGLEGYLEGLLDGVLPGDPETIHAMQHEVRRLRKLVDDLQHLSRVEAGQVAIQPQRFDVVALVHRIVAHLRPQLIEQCLQIAIEAPEKEALAYADPDRTAQVLINLIGNAIRYTPEDGCITIRVRCDPTHVQVIVEDTGIGIPAEALPYLFERFYRVDPSRSRASGGSGIGLTIARHLARAMGGEITAASPGIGKGSVFTLILPRGEIAS
>NC_009523.1|WP_011955571.1|995604_996912_-|carbohydrate-ABC-transporter-substrate-binding-protein
MLPTKWLKLISAFAIVTLALAACGAPSTAQPTAAPAQPTTAPAQTGGGKLEIFSWWTNGGEADGLNAMFSIYQQKNPGVEIVNATVAGGAGTNAKTVLKTRLQGGQPPDSWQVHAGKELTAYVDAGQMEPLTQFFKEQGFDKVMPPKLLEQITYNGEIWSVPVNIHRSNVLWYNIKIFQENGLTPPKTIDDFFMVAEALKAKGIIPLAVGGKDKFETPHLFESVLLAVFGPDDYPKLFQPGADWSDLRVRQAAEIAKRMLEYSNSDRSSLGWADAAQLVLDGKAGMTIMGDWAHGYFISKGAKVGVDYGYAAAPGNDGVFMWLSDSFGLAKGAPNPEQAKAWLALCGSREGQDAFNPKKGSIPARTDADVSLYDEYLKYSIKAFGSEKLVPSVVHGAAAPEAYMTEYGNALNVFAGDLDVDAVVQALQDAAKDLK
>NC_009523.1|WP_011955570.1|994340_995333_-|sugar-ABC-transporter-permease
MRQAKTLSAHPARRVRWMNRDRAIALLMIAPSALAIAVFVYGFIGWTAYISMTDWRGLAMTTSFVGFDNYLTIFNTGRFQTNIRNLIVFTIFFLAACLIIGLLLAVLIDSRVRFEGFFRSVYIFPMALSFIVTGVVWQWLFAPGNWPNDPTGINLLFKQSGLDFLQAAWTTDTSVVPGWRIEGLRTRIGIPMAMIPVVVAAVWQMSGFVMAMYLAGLRGIPEEIKEAARVDGATEWQVFRTITLPMLQPITLSAVIILGHISLKIFDLIVTMTGGAPGNNTEVPGLYMYEITFKANKFAEGAAVAMVMLVVVALLVVPYLIYNRRTEVER
>NC_009523.1|WP_011955569.1|993471_994344_-|carbohydrate-ABC-transporter-permease
MSSVAMPAPKRHHIHWSRMVVYGVMIIFLLFFLLPVYLLLITSFKSFDQVSLSRMWELPTGFSLESFDRAWNGGEGVIGMRGSFWNSVQLVVPATVISCILGSLNGYVLSKWRFPGSETLFTLILFGMFIPYQSVLVPLVEVLREIRLYATIPGLILVHVVYGIPITTLIFRNYYATVPNELVEAGKIDGADFFHIYRHVMLPLSAPGFVVVAIWQFTSIWNEFLFGLIITNDPQLRPVTVALQNLSGSQFTQWNVQMAGALMVALPPLLVYIFLGKYFLRGLLAGSLKG
>NC_009523.1|WP_011955580.1|1004567_1006325_-|sulfate-permease
MAVSPSLKTPLTGSGLRRYLPFLNWLLHYRRDDLPSDLVAGLVTAIMLIPQSMAYAQLAGLPPQIGLYASVAPLAVYALLGTSGQLSVGPVAITSLAVFAGVSALAEPGSPRYLELVLLLAFIVGMVKLLLGVLRLGFLMNFVSHPVLAGFTSASALIIAAGQLKYLLGYRIEGERFHEVVLSAITGASQTNPATLAVGLGSMILLLLFRSWLKPFLQQRTRLPSAAVTLIVSGAPLLTVVLGILAAWLWRLNETAGVRVVGAIPQGFAPFTLPSLSIADAQALMPTALTIVFISVVESIAVARALASKRRKAIDPDQELVALGAANVTASITGGYLVTGGFARSVVNDQAGAVTGLASLVTAASIGVIVLWFTPLFYYLPQAVLAATVIVAVLSLFKPGEALRIWRMNRTDALTWGVTFAVVLLSGIEAGILTGVALSLLLFLWRTSRPHIAIVGRVGQSEHFRNVLRHQVQTCPHVVAVRVDESLYFANTRYLEDTLLRIVAERPEVKHLVLIGSAINFIDASAMETLESLLHELRAAGVELHLADIKGPVMDQLQRAGFIEHLGAERVYLSTHQAMQALGCV
>NC_009523.1|WP_011955581.1|1006345_1006843_-|hypothetical-protein
MPKCINEAELIAAQKAALIRFDIDERLTLAGQPQPDDWAALAAEGFQVVVNMRSDPERAAVQQRNAEAVGLQYIHLPLPVYELEPDHLEQYHQVMQSVQGRVFLHCRSATRVALMWMLDRIVYDGWRREEAESALRAAGYDDEAMETFAFCADDYFERVAAESGR
>NC_009523.1|WP_011955582.1|1006868_1007459_-|hypothetical-protein
MSMTVTETTTGRESETVALLERIAALEARVAALEAHPAQSIEDRLAMVVFSGDLDKAIAALIIATGAASVGLETSMFFTFWGLNAVKKQKVFAGKNLLEQGFAAMLPAGLGQMGLSQMNFFGAGAQIIRKLMHDHGVMSVEELFNLARELGVRMVVCDMSRELLGVRDEELVDGLEHGGVATFLGDATRAKVTLFI
>NC_009523.1|WP_011955583.1|1007500_1007752_-|sulfurtransferase-TusA-family-protein
MELTYHQTLDVKGAKCPMPLVKSRKAMTELPVGQVLRVIATDRGSVADFQGWVKAAKNIELIAQEVIHEGGQELYVHYLRRTA
>NC_009523.1|WP_011955584.1|1007785_1008967_-|MBL-fold-metallo-hydrolase
MTVPETQTQTPVMTAATLYDALLRNTAPYILDVRNPDDFARWRIEGRAGLTVENIPYYNFIEDEDGAVARVPADREVLVVCAKEGSSQFVADLLRARGVNASYLAGGILSWGHLYDTRDIVVAPWGRIVQVARPARGDVSFIVISDGAAAVIDPLRHTAPYLEAIAAHGARLTHIFDTHVHADHISGGPALNRETGAPYYVHPYDAIHPIDMLPAVIPYTALDDGQVFQIGRVELRMIWYPGHTLGQVNILAVAPDGFRGLFTGDGIFLRSFGRPDLGGKGEAWTPLLYESMTRRLPPYLDDATLILPAHFSTLDEADEAGRVAAPWGVVRQTNTSLLHLASEEEFRSFVLGNLPEFPPQYVEIKRVNIGLRIPSEAEAEELELGKNVCALAK
>NC_009523.1|WP_083763256.1|1009637_1010042_-|GNAT-family-N-acetyltransferase
MSARKGVSAVVLEDLWVLPDYIGKDIGRKLFEHAIKQAQLSGADHLELDADPNATPFYTRMGCHVVGERISEWVRAVPYMVCDRNCSGMRLKPRLRGRFAPGDRLCGRRGSVHAGGRPAKSLPEAISIAERKSA
>NC_009523.1|WP_011955585.1|1010216_1011293_-|Gfo/Idh/MocA-family-oxidoreductase
MSTPLRIGVVGAGAVVVHGHVPSLQAIPGVQVTAICDTNLARAQEVAAKFHIPHVFADYRDLIALDEVDAITIAVPNVFHAPVAIAALEAGKHVLCEKPLATSVEDGEAMVAAAEKAGRILAVNMSNRPRPEILMLRQMAQAGRFGNITYALGRMLRRNGIPGYGSWFTRKELAGGGATMDIGVHMLDMVYWILGFPPVSAVRGEIQAVHGPYERGLGGWGADRVPGGIFDVDDLAAIHLRLANGGLVTIEVTWAIHARNEERIQIAGDLAGADYFPDLYGRDHPLRIYRAEDGVPVEIMPDIPKKEWAWAEGFRHFVAACRGEGAPLATGAEGLTVLRLLDAAYRSAAAGKEVKMDG
>NC_009523.1|WP_157040965.1|1011540_1011705_+|hypothetical-protein
MRTIFWLVIIAGIAIWTLALQRELATVRKHRAMYREAAVRMERRLHELSRTLSL
>NC_009523.1|WP_011955587.1|1011749_1013252_+|Ppx/GppA-family-phosphatase
MQKRIGIIDLGSNTTRMIVMGYTPHHSFRLLDEVRESVRLAEGIGPDGRLKPAAMDRAVATMRLFHTLSHSEHVQTIVPVATSAVREATNQAEFIARLAAEAGLSMRVLSAREEAYYGYLGVVNSIDLRDGFVIDIGGGSTQVSQVRGRGFLRWFSQPIGALRAMERFVHSDPISPKDFRALEAGIADYFAPLDWLSVDQGPMLVGIGGTIRTLAEIDQKVHTYPLDRIHGYVLTRDRLEALIERLRGMNQRQREEVPGLRRDRADLILPGAVILAHLMRRGGFEALTVGGQGLREGIFYEHFLVGEQPPLFADMRSFSVQNLARIYNYEVLHAAKVRDLALSMFDQLRPLHNYGEWERTLLAYAATLHDIGLAVNYYDHHKHGAYLVLNSALQGFTHREIALIALLVQFHRKGDVSLGALRELLHPDDEPRVSRLAALLRIAEYLERRKCQVVQDITVEIGDTIRMTARTVGDATVEIWDANRGARLFRKAYGRDVEIV
>NC_009523.1|WP_011955588.1|1013307_1015710_-|DNA-translocase-FtsK
MARAKQSSSGRKSAGARRKRTSAASPPALRPEHQRELFALGLIAVAAVTVVFYVTGTAGVIGASWVELTRRLLGWGALVVPLSLGLLGLAILLQEQYEDVRLTGATVIGTALVLMALLVLLEFSIGVREGLDARVGEGGGIAGYAVLALLSQAIGRPAAFVVVCLTGLAGILLTFDITLHELFSSLRDGGARFWATVWNPGRKHAAEPSVLATRQPAPDKNAATNDVPSPQSGSDDIVPTPIAERPTRASLFQRPETRARRTPAQQPTAEPAPKADPGNATPGNTTLLTSLLTTPTPGAPSEVVQKALEGFEISPVHRAWPLPSLDVLERYPEGTITDEEKRLRSRLIEETLASFKVEAQVVGVNTGPAVTQFELQPAVGVKVSKITTLEKDLALALAATSIRIEAPIPGKNVIGIEIPNSAISIVGMREVIESEEFERTKGRLKWPLGKDVSGTPVIAALDRMPHALMAGATGTGKSAGINALVCSLLLKHTPDELKFIMVDPKMVELIVYNRIPHMLSPVVTELERVVPTLKWATREMERRYKVFARYGFRNIEGYNSAARRRADLEPLPYIVIIIDELADLMMMAPDEVETLICRLAQMARATGIHLVIATQRPSVDVVTGLIKANFPTRIAFAVTSQTDSRVILDMNGAEQLLGRGDMLYMAADAARPIRLQGTWVSEAEVERIVQFWRNATPPETGDDQKKTGAATKEQPDEQSGMQPPGEFLSAAEQDELLPQAIKLVQQHSRASASLLQRRLRIGYSKAAQLIDLLEQQGIVGPAEDGRSREVLKRSEHGDEA

Crispr_ID: NC_009523_16

• CRISPR_ID: NC_009523_16
• CRISPR_location: 1009231-1009323
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_16

Consensus_repeat	Method
TTATGGTCTTTGAAGAAATAATCCG	CRISPRCasFinder

spacers of NC_009523_16

>16.1|1009256|43|NC_009523|CRISPRCasFinder
CGCTAACCCGCGCAGGCGGACTTCGCATTCCATAGCCGAGGGC

CRISPR arrays and Neighbor proteins around NC_009523_16

CRISPR arrays

The CRISPR arrays of NC_009523_16

>merge|NC_009523|16|1009231-1009323|CRISPRCasFinder
TTATGGTCTTTGAAGAAATAATCCGCGCTAACCCGCGCAGGCGGACTTCGCATTCCATAGCCGAGGGCTTATGGTCTTTGAAGAAATAATTCG

>NC_009523|16|14|1009231-1009323|CRISPRCasFinder
TTATGGTCTTTGAAGAAATAATCCG	CGCTAACCCGCGCAGGCGGACTTCGCATTCCATAGCCGAGGGC
TTATGGTCTTTGAAGAAATAATTCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955590.1|1018276_1019848_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	unknown	unknown	gnl|CDD|293734
NC_009523.1|WP_157040966.1|1023248_1024949_+|glycosyl-transferase	unknown	unknown	gnl|CDD|224720
NC_009523.1|WP_011955591.1|1019867_1022900_-|preprotein-translocase-subunit-SecA	unknown	unknown	gnl|CDD|237259
NC_009523.1|WP_011955589.1|1016948_1017911_-|IS110-like-element-ISRfsp2-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_157040965.1|1011540_1011705_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_083763255.1|999303_1000005_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|225136
NC_009523.1|WP_083763256.1|1009637_1010042_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379326
NC_009523.1|WP_011955585.1|1010216_1011293_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009523.1|WP_011955580.1|1004567_1006325_-|sulfate-permease	unknown	unknown	gnl|CDD|273284
NC_009523.1|WP_011955593.1|1024951_1025542_+|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|133025
NC_009523.1|WP_011955584.1|1007785_1008967_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293810
NC_009523.1|WP_011955581.1|1006345_1006843_-|hypothetical-protein	unknown	unknown	gnl|CDD|350353
NC_009523.1|WP_011955588.1|1013307_1015710_-|DNA-translocase-FtsK	unknown	unknown	gnl|CDD|224588
NC_009523.1|WP_011955578.1|1002399_1003092_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223473
NC_009523.1|WP_011955582.1|1006868_1007459_-|hypothetical-protein	unknown	unknown	gnl|CDD|379334
NC_009523.1|WP_011955583.1|1007500_1007752_-|sulfurtransferase-TusA-family-protein	unknown	unknown	gnl|CDD|376492
NC_009523.1|WP_011955579.1|1003157_1004153_+|SufBD-protein	unknown	unknown	gnl|CDD|223791
NC_009523.1|WP_011955587.1|1011749_1013252_+|Ppx/GppA-family-phosphatase	unknown	unknown	gnl|CDD|223326
NC_009523.1|WP_011955576.1|1001069_1002032_+|radical-SAM-protein	unknown	unknown	gnl|CDD|223803
NC_009523.1|WP_085979425.1|1002028_1002376_+|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl|CDD|225062

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955590.1|1018276_1019848_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase	gnl|CDD|293734	cd16010, iPGM, 2 3 bisphosphoglycerate independent phosphoglycerate mutase iPGM. The 2,3-diphosphoglycerate- independent phosphoglycerate mutase (iPGM) catalyzes the interconversion of 3-phosphoglycerate (3PGA) and 2-phosphoglycerate (2PGA). They are the predominant PGM in plants and some other bacteria, including endospore forming Gram-positive bacteria and their close relatives. The two steps catalysis is a phosphatase reaction removing the phosphate from 2- or 3-phosphoglycerate, generating an enzyme-bound phosphoserine intermediate, followed by a phosphotransferase reaction as the phosphate is transferred from the enzyme back to the glycerate moiety. The iPGM exists as a dimer, each monomer binding 2 magnesium atoms, which are essential for enzymatic activity.	0
NC_009523.1|WP_011955591.1|1019867_1022900_-|preprotein-translocase-subunit-SecA	gnl|CDD|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NC_009523.1|WP_011955589.1|1016948_1017911_-|IS110-like-element-ISRfsp2-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	4.43184e-21
NC_009523.1|WP_157040966.1|1023248_1024949_+|glycosyl-transferase	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	5.52472e-15
NC_009523.1|WP_083763255.1|999303_1000005_-|methyltransferase-domain-containing-protein	gnl|CDD|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	2.17714e-22
NC_009523.1|WP_083763256.1|1009637_1010042_-|GNAT-family-N-acetyltransferase	gnl|CDD|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.30386e-13
NC_009523.1|WP_011955585.1|1010216_1011293_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.34435e-75
NC_009523.1|WP_011955580.1|1004567_1006325_-|sulfate-permease	gnl|CDD|273284	TIGR00815, Sulfate_transporter, high affinity sulphate transporter 1. The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions].	1.75171e-139
NC_009523.1|WP_011955593.1|1024951_1025542_+|nucleotidyltransferase-family-protein	gnl|CDD|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	8.55507e-73
NC_009523.1|WP_011955584.1|1007785_1008967_-|MBL-fold-metallo-hydrolase	gnl|CDD|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	7.77172e-61
NC_009523.1|WP_011955581.1|1006345_1006843_-|hypothetical-protein	gnl|CDD|350353	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982. This subfamily is composed of bacterial tyrosine-protein phosphatases similar to Neisseria meningitidis NMA1982, which displays phosphatase activity but whose biological function is still unknown.	4.30933e-35
NC_009523.1|WP_011955588.1|1013307_1015710_-|DNA-translocase-FtsK	gnl|CDD|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	3.05202e-156
NC_009523.1|WP_011955578.1|1002399_1003092_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	2.28978e-73
NC_009523.1|WP_011955582.1|1006868_1007459_-|hypothetical-protein	gnl|CDD|379334	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family. DsrE is a small soluble protein involved in intracellular sulfur reduction. The family also includes YrkE proteins.	9.63609e-54
NC_009523.1|WP_011955583.1|1007500_1007752_-|sulfurtransferase-TusA-family-protein	gnl|CDD|376492	pfam01206, TusA, Sulfurtransferase TusA. This family includes the TusA sulfurtransferases.	4.31904e-17
NC_009523.1|WP_011955579.1|1003157_1004153_+|SufBD-protein	gnl|CDD|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	1.06528e-47
NC_009523.1|WP_011955587.1|1011749_1013252_+|Ppx/GppA-family-phosphatase	gnl|CDD|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	5.8095e-126
NC_009523.1|WP_011955576.1|1001069_1002032_+|radical-SAM-protein	gnl|CDD|223803	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion].	6.40446e-78
NC_009523.1|WP_085979425.1|1002028_1002376_+|metal-sulfur-cluster-assembly-factor	gnl|CDD|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	2.30719e-17

Protein sequences

>NC_009523.1|WP_011955584.1|1007785_1008967_-|MBL-fold-metallo-hydrolase
MTVPETQTQTPVMTAATLYDALLRNTAPYILDVRNPDDFARWRIEGRAGLTVENIPYYNFIEDEDGAVARVPADREVLVVCAKEGSSQFVADLLRARGVNASYLAGGILSWGHLYDTRDIVVAPWGRIVQVARPARGDVSFIVISDGAAAVIDPLRHTAPYLEAIAAHGARLTHIFDTHVHADHISGGPALNRETGAPYYVHPYDAIHPIDMLPAVIPYTALDDGQVFQIGRVELRMIWYPGHTLGQVNILAVAPDGFRGLFTGDGIFLRSFGRPDLGGKGEAWTPLLYESMTRRLPPYLDDATLILPAHFSTLDEADEAGRVAAPWGVVRQTNTSLLHLASEEEFRSFVLGNLPEFPPQYVEIKRVNIGLRIPSEAEAEELELGKNVCALAK
>NC_009523.1|WP_011955583.1|1007500_1007752_-|sulfurtransferase-TusA-family-protein
MELTYHQTLDVKGAKCPMPLVKSRKAMTELPVGQVLRVIATDRGSVADFQGWVKAAKNIELIAQEVIHEGGQELYVHYLRRTA
>NC_009523.1|WP_011955582.1|1006868_1007459_-|hypothetical-protein
MSMTVTETTTGRESETVALLERIAALEARVAALEAHPAQSIEDRLAMVVFSGDLDKAIAALIIATGAASVGLETSMFFTFWGLNAVKKQKVFAGKNLLEQGFAAMLPAGLGQMGLSQMNFFGAGAQIIRKLMHDHGVMSVEELFNLARELGVRMVVCDMSRELLGVRDEELVDGLEHGGVATFLGDATRAKVTLFI
>NC_009523.1|WP_011955581.1|1006345_1006843_-|hypothetical-protein
MPKCINEAELIAAQKAALIRFDIDERLTLAGQPQPDDWAALAAEGFQVVVNMRSDPERAAVQQRNAEAVGLQYIHLPLPVYELEPDHLEQYHQVMQSVQGRVFLHCRSATRVALMWMLDRIVYDGWRREEAESALRAAGYDDEAMETFAFCADDYFERVAAESGR
>NC_009523.1|WP_011955580.1|1004567_1006325_-|sulfate-permease
MAVSPSLKTPLTGSGLRRYLPFLNWLLHYRRDDLPSDLVAGLVTAIMLIPQSMAYAQLAGLPPQIGLYASVAPLAVYALLGTSGQLSVGPVAITSLAVFAGVSALAEPGSPRYLELVLLLAFIVGMVKLLLGVLRLGFLMNFVSHPVLAGFTSASALIIAAGQLKYLLGYRIEGERFHEVVLSAITGASQTNPATLAVGLGSMILLLLFRSWLKPFLQQRTRLPSAAVTLIVSGAPLLTVVLGILAAWLWRLNETAGVRVVGAIPQGFAPFTLPSLSIADAQALMPTALTIVFISVVESIAVARALASKRRKAIDPDQELVALGAANVTASITGGYLVTGGFARSVVNDQAGAVTGLASLVTAASIGVIVLWFTPLFYYLPQAVLAATVIVAVLSLFKPGEALRIWRMNRTDALTWGVTFAVVLLSGIEAGILTGVALSLLLFLWRTSRPHIAIVGRVGQSEHFRNVLRHQVQTCPHVVAVRVDESLYFANTRYLEDTLLRIVAERPEVKHLVLIGSAINFIDASAMETLESLLHELRAAGVELHLADIKGPVMDQLQRAGFIEHLGAERVYLSTHQAMQALGCV
>NC_009523.1|WP_011955579.1|1003157_1004153_+|SufBD-protein
MEMQQPLDAAVGRDSIDWTREYQAILRAYEQAGGSPAVLRAGRVAALVVNANRVLGIINVPGVTIDAEPLSDGVQMRIVAAPGACLDRPVHLCFGMLPETGTQRIIAEYEIGAGAQVEFLAHCTFPNARDLQHTMEAQVHVGEGACLRYTEAHYHGPYGGVVVEACADVAVAAGGRYFSTFSLTHGRVGRLLIDYTADVDDSGVVDLASMVYGTGNDDIEVREAVRLNGRGARGLAKTRIAVRDQAHSRVFTTAEGNAPGTRGHMDCAEIVRGNAVAKNVPTVIVRNDGAHVTHEAAIGSVNQKELETLMARGLDEDTAVDVIIRGMLGQL
>NC_009523.1|WP_011955578.1|1002399_1003092_+|ATP-binding-cassette-domain-containing-protein
MNDNDVLLDVQGVTLVREGRTILRDVDLQVLAGEIHALLGVNGSGKSSLAYAIMGCAEYRPDTGRIVFAGRVVNDLPIYERARLGLTLAWQEPARFDGLPIGDYLTLGRPTMTREELWEALHAVALAPEAYLPRALDRTLSGGERKRIELAAVYAMRPRLAIFDEPDSGVDVLSFGDVQHLVRRMARMGCAVLLITHRNEMATIADRASVMHAGQIVMTGAPEEARLAYP
>NC_009523.1|WP_085979425.1|1002028_1002376_+|metal-sulfur-cluster-assembly-factor
MKGGGCLMSVDRPHDVALEIAVWEALQHVIDPEPGISLLDLGLVQSVAVTDGRAIIELALTTPFCPLVDVMEHMVRAAALDVPGIRDAEVRLVDGPWKPPAAAPWRRWLDETMPP
>NC_009523.1|WP_011955576.1|1001069_1002032_+|radical-SAM-protein
MACVFGPIPSRRLGRSLGVDPVPLKTCNWNCVYCQLGRTRPLTNERRVYVPLPVILNELEQALANRAPDEIDWVTIVGSGEPTLHSEIGELIRAIKRLTTLPLAVITNGALLYLPDVRADLCAADAVMPTLSAGSASVYRALHRPHPETTFERLLEGLIAFRAEYRGKLWVEVMLVRGVNDSEAALRDLASALQRIQPDRIDITLPERPPAEPWVEPPDAGGLMRATAILGAAAHVVHPAEGSFDLRGYATPVEAILAIIARHPMRVTELERALTRWAPDQVHEALRTLEASGAARLIERYGSQFWCAADAFYAPAAPAP
>NC_009523.1|WP_083763255.1|999303_1000005_-|methyltransferase-domain-containing-protein
MRGEASLCGQEQRIVQRSAMHFCNEVVSWLKRRHNRTTHTSMLDHFDILAPVYDRLIGSPDPARLIALLRLPTDGWLLDAGGGTGRVAAGLRPFVGGLIISDQSRQMLRRAREKSTLHPVQAQVQRLPFRDGFFDRILVVDALHHFFDQQAAVRELARVLAPGGRLVIEEPDIHRPAVKLVALAERMALMGSTFLAPEIVRDLLAAQELHAQVAERDRFSAWIVADKPSGGTR
>NC_009523.1|WP_083763256.1|1009637_1010042_-|GNAT-family-N-acetyltransferase
MSARKGVSAVVLEDLWVLPDYIGKDIGRKLFEHAIKQAQLSGADHLELDADPNATPFYTRMGCHVVGERISEWVRAVPYMVCDRNCSGMRLKPRLRGRFAPGDRLCGRRGSVHAGGRPAKSLPEAISIAERKSA
>NC_009523.1|WP_011955585.1|1010216_1011293_-|Gfo/Idh/MocA-family-oxidoreductase
MSTPLRIGVVGAGAVVVHGHVPSLQAIPGVQVTAICDTNLARAQEVAAKFHIPHVFADYRDLIALDEVDAITIAVPNVFHAPVAIAALEAGKHVLCEKPLATSVEDGEAMVAAAEKAGRILAVNMSNRPRPEILMLRQMAQAGRFGNITYALGRMLRRNGIPGYGSWFTRKELAGGGATMDIGVHMLDMVYWILGFPPVSAVRGEIQAVHGPYERGLGGWGADRVPGGIFDVDDLAAIHLRLANGGLVTIEVTWAIHARNEERIQIAGDLAGADYFPDLYGRDHPLRIYRAEDGVPVEIMPDIPKKEWAWAEGFRHFVAACRGEGAPLATGAEGLTVLRLLDAAYRSAAAGKEVKMDG
>NC_009523.1|WP_157040965.1|1011540_1011705_+|hypothetical-protein
MRTIFWLVIIAGIAIWTLALQRELATVRKHRAMYREAAVRMERRLHELSRTLSL
>NC_009523.1|WP_011955587.1|1011749_1013252_+|Ppx/GppA-family-phosphatase
MQKRIGIIDLGSNTTRMIVMGYTPHHSFRLLDEVRESVRLAEGIGPDGRLKPAAMDRAVATMRLFHTLSHSEHVQTIVPVATSAVREATNQAEFIARLAAEAGLSMRVLSAREEAYYGYLGVVNSIDLRDGFVIDIGGGSTQVSQVRGRGFLRWFSQPIGALRAMERFVHSDPISPKDFRALEAGIADYFAPLDWLSVDQGPMLVGIGGTIRTLAEIDQKVHTYPLDRIHGYVLTRDRLEALIERLRGMNQRQREEVPGLRRDRADLILPGAVILAHLMRRGGFEALTVGGQGLREGIFYEHFLVGEQPPLFADMRSFSVQNLARIYNYEVLHAAKVRDLALSMFDQLRPLHNYGEWERTLLAYAATLHDIGLAVNYYDHHKHGAYLVLNSALQGFTHREIALIALLVQFHRKGDVSLGALRELLHPDDEPRVSRLAALLRIAEYLERRKCQVVQDITVEIGDTIRMTARTVGDATVEIWDANRGARLFRKAYGRDVEIV
>NC_009523.1|WP_011955588.1|1013307_1015710_-|DNA-translocase-FtsK
MARAKQSSSGRKSAGARRKRTSAASPPALRPEHQRELFALGLIAVAAVTVVFYVTGTAGVIGASWVELTRRLLGWGALVVPLSLGLLGLAILLQEQYEDVRLTGATVIGTALVLMALLVLLEFSIGVREGLDARVGEGGGIAGYAVLALLSQAIGRPAAFVVVCLTGLAGILLTFDITLHELFSSLRDGGARFWATVWNPGRKHAAEPSVLATRQPAPDKNAATNDVPSPQSGSDDIVPTPIAERPTRASLFQRPETRARRTPAQQPTAEPAPKADPGNATPGNTTLLTSLLTTPTPGAPSEVVQKALEGFEISPVHRAWPLPSLDVLERYPEGTITDEEKRLRSRLIEETLASFKVEAQVVGVNTGPAVTQFELQPAVGVKVSKITTLEKDLALALAATSIRIEAPIPGKNVIGIEIPNSAISIVGMREVIESEEFERTKGRLKWPLGKDVSGTPVIAALDRMPHALMAGATGTGKSAGINALVCSLLLKHTPDELKFIMVDPKMVELIVYNRIPHMLSPVVTELERVVPTLKWATREMERRYKVFARYGFRNIEGYNSAARRRADLEPLPYIVIIIDELADLMMMAPDEVETLICRLAQMARATGIHLVIATQRPSVDVVTGLIKANFPTRIAFAVTSQTDSRVILDMNGAEQLLGRGDMLYMAADAARPIRLQGTWVSEAEVERIVQFWRNATPPETGDDQKKTGAATKEQPDEQSGMQPPGEFLSAAEQDELLPQAIKLVQQHSRASASLLQRRLRIGYSKAAQLIDLLEQQGIVGPAEDGRSREVLKRSEHGDEA
>NC_009523.1|WP_011955589.1|1016948_1017911_-|IS110-like-element-ISRfsp2-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTINRKEAAAVVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011955590.1|1018276_1019848_-|2,3-bisphosphoglycerate-independent-phosphoglycerate-mutase
MTTISRPRPVLLVIRDGWGERDEIEGNGVKLARTPYDDRWRAECPFTLVRAAGKDVGLPTGQMGNSEVGHLNLGAGFIVRQDITVIDDSIADGTFFTNPVLCTAFRTVRDRGTALHLMGLLGPGGVHSHVNHTKALLELAKREGLERVYVHLFTDGRDTMPQSGIEFARDLLAFMAERQIGRVASVVGRYYAMDRDKRWDRTKQAYDLLTKGVGRPAPDALTAIQRSYDEGVTDEFIKPAVIVDEAGQPVATIGDGDAVVCFNFRADRVRQISRAFTLPDFDGFEREMLRDLIYIAMTEYEKNMPYQVAFQNDDVAVPLAKVISDAGLRQFHAAETEKYPHVTFFFNGGREQPFPGEDWQIVPSPKDVPTYDLKPEMSAYGVRDVVLHAIASDQYDFILVNYANPDMVGHTGVIPAVVKACEVVDECTGAIVDAVVARGGVALVMADHGNAELMIDPETGGPHTAHTTNPVPTYLIAAPGLGLDKGQVALRDGGRLADVAPTILDLLGLDPAPQMTGKSLIVR
>NC_009523.1|WP_011955591.1|1019867_1022900_-|preprotein-translocase-subunit-SecA
MKAFFEKLLGFGPDRAIKQIEPIVRRINSLEPSVEALSNAELRAKTDEFKQRLADGETLDDLLPEAFAVVREAARRTIGQRHYDVQLIGGIVLHQGKIAEMKTGEGKTLVATLPLYLNALTGRGCHLVTVNDYLAKVGAGWMGPIYHLLGLSVATISHEYSAIYDPDYVDPKANPDDRRLVHWRPCSRREAYLADITYGTNNEFGFDYLRDNMAWDLAQLVQRELHYAIVDEVDNILIDEARTPLIISGPAQESGDEYRRFATLVRHLKPSPYTPDQIKKQMIEDPEGDFVIEPRSKSIQLTDQGVAKIERLLKIPEGESLYDPKYYRLTHYLDNALRAEFIYQRDRDYIVEHGEVIIVDEFTGRKMPGRRWSDGLHQAVEAKEGVKPRQENVTLATITFQNYFRMYQKLAGMTGTAYTEREEFAKIYNLEVVVIPTHRPMIRKDYDDQIYRSEKAKFEAVIREIEEMHAIGRPVLVGTTSVETSERLSEMLKRRGIKHEVLNAKYHEREARIVAQAGRKGAVTIATNMAGRGTDILLGGNPDGLIEEILAQRGIKIEQATPEQIRAAQEEARRITEAEGKEVRELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLLRRFGPMDRVKGLMERLGVDDSLPIEAGLINRTIESAQTRVEGYNFDIRKHTVEFDDVMNKQRTVIYADRRRILEGENMRERVLDMIADEVHALVERYLPETKGRADDFEEWDIEGLVRAVRTIDPLLDETKLSPEQLEHLSRQEIEDAIMQAIEDDYQEREKAIGEENMRLVERRMMLSAIDRQWIDYLTGMEDLRQEIGLQAVAQRDPLIEYQRNAYAMFEELKANIQRDIVYQIIPVSFQYEQHLRQVEAEQQRRLLAAQQAGAADGNAKGARTVRHSVRLPGRNEPCPCGSGKKFKVCHWGREEELIALLQQRQTDQHAAVAADTPAQPAPQATATRPPTSQVPRGRAAPPPANPQPRSGKSPAQAPRGKGASARKK
>NC_009523.1|WP_157040966.1|1023248_1024949_+|glycosyl-transferase
MTTTPSAFPRLYQDDHAHRRFAVQHGVSALFLAVLTVVLLLITEPQIGLTWDEPVYLMAARSYAAWFEHLATDPGDALQPGTIKRFWEINHEHPPLDKIWSGMVWMMARQFLDDLPAQRLGNMILVAIAVGALYTAVASSFGVWAGIASAVALISLPRFFFHAHLAALDVPAAVAFFLATMLFWHTRHRSSVAWDVALGVAWGAALATKINALFVLPMIFLWTLAFARQAFLVRRMFIAGIIGLPTFVGFWPWLYHDTVARLIAYIRFITVDHWEIGQWYFGEAYMPPPWHFPFVMLVAVTPLAILILAFAGMIRGVVALRSSRQTERDQGSQIALWSLGVLVPLLALTTGRTMVYDNERLFMPSFLFVAALAGIGLDGFGRALRRALERRALARFTTPAVVLGCAVLFAPHLTIAAHMYPHLLSYYSETVGGLRGATRLGLETTYWCETYAQALPYINAHASPGAVVWTEDWSHDVLLTYQFIGRLRPDVRVALAPGAGSLFSRYGLEGTPADISDADYVIVTYRQTGFAAHPKIERWMAGRQPIVRIERYGVPLMELYEQPRIR
>NC_009523.1|WP_011955593.1|1024951_1025542_+|nucleotidyltransferase-family-protein
MIAGIILAAGSSSRMGQPKQLLDWGGRPLVRVIAATALAAALDEVIVVTADADAAVAAALADLPIRIVPNPRAAEGQSTSLCAGIAALSAGVEAALILLGDQPFVTAAIINALIDAWRDRRVPVVAPVFAGVRGNPVLFDRAMFGELLTIEGDQGARGVIARDPTRVHLIHFDDERPLLDIDTPEAYTRARRLLDV

Crispr_ID: NC_009523_17

• CRISPR_ID: NC_009523_17
• CRISPR_location: 1186318-1186409
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_17

Consensus_repeat	Method
GGTTGATAGGACGATGGGAATGG	CRISPRCasFinder

spacers of NC_009523_17

>17.1|1186341|46|NC_009523|CRISPRCasFinder
CGAGCGCACCGACTGCGGCAGACTCCGATCATCGTCGTAGGTCGAG

CRISPR arrays and Neighbor proteins around NC_009523_17

CRISPR arrays

The CRISPR arrays of NC_009523_17

>merge|NC_009523|17|1186318-1186409|CRISPRCasFinder
GGTTGATAGGACGATGGGAATGGCGAGCGCACCGACTGCGGCAGACTCCGATCATCGTCGTAGGTCGAGGGTTGGTAGGACGATGGGAATGG

>NC_009523|17|15|1186318-1186409|CRISPRCasFinder
GGTTGATAGGACGATGGGAATGG	CGAGCGCACCGACTGCGGCAGACTCCGATCATCGTCGTAGGTCGAG
GGTTGGTAGGACGATGGGAATGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955729.1|1190437_1190809_+|hydrogenase-maturation-nickel-metallochaperone-HypA	unknown	unknown	gnl|CDD|376468
NC_009523.1|WP_011955726.1|1186818_1188168_-|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223737
NC_009523.1|WP_011955716.1|1177633_1179355_-|acetolactate-synthase	unknown	unknown	gnl|CDD|223107
NC_009523.1|WP_011955717.1|1179487_1179808_+|DUF4342-domain-containing-protein	unknown	unknown	gnl|CDD|379521
NC_009523.1|WP_011955719.1|1181014_1182043_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl|CDD|224936
NC_009523.1|WP_083763262.1|1195544_1195976_+|DUF1641-domain-containing-protein	unknown	unknown	gnl|CDD|369554
NC_009523.1|WP_011955731.1|1193236_1193848_+|riboflavin-synthase	unknown	unknown	gnl|CDD|236455
NC_009523.1|WP_011955728.1|1189386_1190223_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293819
NC_009523.1|WP_011955721.1|1183339_1183672_+|4Fe-4S-ferredoxin	unknown	unknown	gnl|CDD|225289
NC_009523.1|WP_011955727.1|1188426_1189374_+|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl|CDD|234929
NC_009523.1|WP_011955735.1|1196999_1197269_+|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	unknown	unknown	gnl|CDD|376549
NC_009523.1|WP_011955718.1|1180172_1181018_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl|CDD|238847
NC_009523.1|WP_011955720.1|1182023_1183337_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|182194
NC_009523.1|WP_157041253.1|1194638_1195142_+|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl|CDD|234606
NC_009523.1|WP_011955715.1|1176350_1177469_-|DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_011955723.1|1184620_1185259_+|HD-GYP-domain-containing-protein	unknown	unknown	gnl|CDD|225116
NC_009523.1|WP_011955736.1|1197265_1198381_+|hydrogenase-formation-protein-HypD	unknown	unknown	gnl|CDD|237892
NC_009523.1|WP_083763261.1|1183816_1184665_-|response-regulator	unknown	unknown	gnl|CDD|340399
NC_009523.1|WP_011955734.1|1195953_1196661_+|hydrogenase-nickel-incorporation-protein-HypB	unknown	unknown	gnl|CDD|349775
NC_009523.1|WP_011955724.1|1185310_1186072_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955729.1|1190437_1190809_+|hydrogenase-maturation-nickel-metallochaperone-HypA	gnl|CDD|376468	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA. HypA is a metallochaperone that binds nickel to bring it safely to its target. The targets for Hypa are the nickel-containing enzymes [Ni,Fe]-hydrogenase and urease. The nickel coordinates with four nitrogens within the protein. The four conserved cysteines towards the C-terminus bind one zinc moiety probably to stabilize the protein fold.	3.42182e-41
NC_009523.1|WP_011955726.1|1186818_1188168_-|FAD-binding-oxidoreductase	gnl|CDD|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	6.20183e-24
NC_009523.1|WP_011955716.1|1177633_1179355_-|acetolactate-synthase	gnl|CDD|223107	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism].	4.77925e-126
NC_009523.1|WP_011955717.1|1179487_1179808_+|DUF4342-domain-containing-protein	gnl|CDD|379521	pfam14242, DUF4342, Domain of unknown function (DUF4342). This family of proteins is found in bacteria. Proteins in this family are typically between 97 and 206 amino acids in length. There is a single completely conserved residue P that may be functionally important.	3.67078e-05
NC_009523.1|WP_011955719.1|1181014_1182043_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl|CDD|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.30423e-124
NC_009523.1|WP_083763262.1|1195544_1195976_+|DUF1641-domain-containing-protein	gnl|CDD|369554	pfam07849, DUF1641, Protein of unknown function (DUF1641). Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.	3.71154e-08
NC_009523.1|WP_011955731.1|1193236_1193848_+|riboflavin-synthase	gnl|CDD|236455	PRK09289, PRK09289, riboflavin synthase.	7.35385e-102
NC_009523.1|WP_011955728.1|1189386_1190223_+|MBL-fold-metallo-hydrolase	gnl|CDD|293819	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YycJ protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	2.3348e-50
NC_009523.1|WP_011955721.1|1183339_1183672_+|4Fe-4S-ferredoxin	gnl|CDD|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	2.30922e-31
NC_009523.1|WP_011955727.1|1188426_1189374_+|ribose-phosphate-pyrophosphokinase	gnl|CDD|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	1.40945e-140
NC_009523.1|WP_011955735.1|1196999_1197269_+|HypC/HybG/HupF-family-hydrogenase-formation-chaperone	gnl|CDD|376549	pfam01455, HupF_HypC, HupF/HypC family.	2.83384e-30
NC_009523.1|WP_011955718.1|1180172_1181018_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl|CDD|238847	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.	5.30591e-83
NC_009523.1|WP_011955720.1|1182023_1183337_+|FAD-dependent-oxidoreductase	gnl|CDD|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	2.26517e-93
NC_009523.1|WP_157041253.1|1194638_1195142_+|6,7-dimethyl-8-ribityllumazine-synthase	gnl|CDD|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	2.36758e-74
NC_009523.1|WP_011955715.1|1176350_1177469_-|DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	2.74886e-13
NC_009523.1|WP_011955723.1|1184620_1185259_+|HD-GYP-domain-containing-protein	gnl|CDD|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	1.16688e-72
NC_009523.1|WP_011955736.1|1197265_1198381_+|hydrogenase-formation-protein-HypD	gnl|CDD|237892	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional.	0
NC_009523.1|WP_083763261.1|1183816_1184665_-|response-regulator	gnl|CDD|340399	cd16922, HATPase_EvgS-ArcB-TorS-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid sensor histidine kinases, similar to Escherichia coli EvgS, ArcB, TorS, BarA, RcsC. This family contains the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinases (HKs), including the following Escherichia coli HKs: EvgS, a HK of the EvgS-EvgA two-component system (TCS) that confers acid resistance; ArcB, a HK of the ArcB-ArcA TCS that modulates the expression of numerous genes in response to respiratory growth conditions; TorS, a HK of the TorS-TorR TCS which is involved in the anaerobic utilization of trimethylamine-N-oxide; BarA, a HK of the BarA-UvrY TCS involved in the regulation of carbon metabolism; and RcsC, a HK of the RcsB-RcsC TCS which regulates the expression of the capsule operon and of the cell division gene ftsZ. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), with most having accessory sensor domain(s) such as GAF, PAS and CHASE; many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.	1.84092e-41
NC_009523.1|WP_011955734.1|1195953_1196661_+|hydrogenase-nickel-incorporation-protein-HypB	gnl|CDD|349775	cd05390, HypB, nickel incorporation protein HypB. HypB is one of numerous accessory proteins required for the maturation of nickel-dependent hydrogenases, like carbon monoxide dehydrogenase or urease. HypB is a GTP-binding protein and has GTP hyrolase activity. It forms homodimer and is capable of binding two nickel ions and two zinc ions. The active site is located on the dimer interface. Energy from hydrolysis of GTP is used to insert nickels into hydrogenases.	5.15846e-112
NC_009523.1|WP_011955724.1|1185310_1186072_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	9.16261e-21

Protein sequences

>NC_009523.1|WP_011955724.1|1185310_1186072_-|class-I-SAM-dependent-methyltransferase
MSDYDAIARFYDADHSGFADDLPFYRELARRTGGRVIDVMCGSGRLVVPLAQSGIRVTGIDSSAAMIARARERVAAAGVAARVTLHHGDVRSDLPPDHHDLAIVALNSFMHLTTIDDQLAALARIHKALNPDGLLAIDVFNPHARNLAGCDGELTLDRTFRLEDGVRVCKFVAQRADMAQQLNHVTFVYDEIDDGGGVRRTLHTMTLRWFYRYELEHLLERAGFTVEIVYGSYDLDPFVTNSEVMLTIARRMG
>NC_009523.1|WP_011955723.1|1184620_1185259_+|HD-GYP-domain-containing-protein
MQAAIAIETSVLFEQLRRTHAELKQSYDATIEGWSRALDLRDRETEGHSERVTELTLRLARWMGLPDEQMEHIRRGALLHDIGKMGVPDAILLKPGPLSVDEWAIMRQHPAYAFRWLSAIPFLQPALDIPYAHHERWDGSGYPRGLRGEQIPIAARIFTVVDVWDALRSDRPYRAAWTEEQTVAYLRSLAGTHFDPQVVRAFLEMFGYDRGD
>NC_009523.1|WP_083763261.1|1183816_1184665_-|response-regulator
MLKKHGCFDSNCRLHRQRLEKRPPVNAAKFTPPEGQIGIDLEGDPDNEVVRISVWDTGIGIAAEDMPRLFQPFSQIDNVYQRDQAGSGLGLVIVARLAELHGGGVTLVSEPGKGSRFTITLPWTRHHQMWRPESLDAGETSRSELDEEPLPQSYSNDHILLIDDDGKGSAVIGDYLQRCGYCVTHVVSGEEGLALAHHEPPDIVIVDLRLRGLDGLDVIRRLRADVAASTLPIIALTALAMPGDRERSLEAGADVYLSKPVRLRRLAEEIAALLGQNPTQRR
>NC_009523.1|WP_011955721.1|1183339_1183672_+|4Fe-4S-ferredoxin
MNNNNHKTAPVAEVSLPHVNLDDLIVCLKYYVDEEVAHIRVKDQAICATCDPKPCLAFCPAHVFETDRQGRVMVSYQACVECGSCRVACPFRNVDWRLPRGGYGVAYKYG
>NC_009523.1|WP_011955720.1|1182023_1183337_+|FAD-dependent-oxidoreductase
MGRLTFDAIVVGAGPAGVAAALTMARGGLKVIIIERGRFAGAKNLFGGVFYTHALADVLPDYWERKPPFERPVTEQGYWMLSPDSVIRVMHKSERYRKEPADAYTVLRARFDPWFAEQAVQAGALLITRTTVTRLLKDERGRVIGVDTDRPEGSVYAPVVIIAEGVNNLLTRQAGLIASDLPPTHVALAVKEYVNLPAKELQARFGLSGPREGVAIDVFGDVTLGLPGTGFIYTDQSGISIGVGMLLDEFITHRLRPYQVLERFKNHPVVRPYLEGGEVREYGAHLIPEMGYDRMPKLAGDGVMVAGDAAGMVDALHREGTNLAITAGKAAGETALAAHQQGDFSAAFLNRYRRTLEDSFVLKDMKQYRRMTDFLESSPQFMGTYVNLLNEAALRYFTAHGIPKREMEHDILKMVRERRSFTGVAWDMLKLMRAMRG
>NC_009523.1|WP_011955719.1|1181014_1182043_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNAEQPVVPRIWVFVEQQERQVHPVSWELLGAAKRLSADLPGSVVEAVLPGHQIADLAPQAFHYGASRVYVIDSPVLEIYRNLPYAVAVSQLVMQYRPEIFLIGATTLGRDLAGSIATRVGTGLTADCTELAIDPAQHILAATRPTFGGNLMATILCRRHRPQMATVRPRVLPMPDPMPDATGEVITVPFDMREEDVPVKRLRLIRAEEQPNIEYADVLVAGGRGVGGPEGFALLEELANALGGMVAASRPVVDAGWMDAGRQVGQTGKTVRPKLYIAAGISGAVQHRVGMSGADVILAINTDPNAPIFQIATLGIVGDLYEVIPALIRQVKGQAQDGQAHL
>NC_009523.1|WP_011955718.1|1180172_1181018_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MHAVVAIKQVPDTSNVRIDPETGTLIREGVPAIVNPYDLHAVEAAVQLKERVGGGQVTVITMGPPKAAEALIECIEQGADRAILISDRKFGGADTLATSYVLARAIETINAELPVDIILFGKQAIDGDTAQVGPGVATRLNIPLITYAIAIEEFDLESRTAIVHRRIEQGVEVLQTSLPVLLTVEKEIAPVRHAPLPRLIAAARYQPEVWSATAPVVFDPQQIGLKGSPTVVGKAFTPEQRSGGEVISVADLGLNAVVARALAVIEQAHVRNLQPETGVVS
>NC_009523.1|WP_011955717.1|1179487_1179808_+|DUF4342-domain-containing-protein
MTAQSSTETITVDGGAMVEQLRRRITGSNVQRVVVKQGLQPVAAFPAIGGMLSAAVQSAIGALAVALADCTIEIERVASEETTRDSELDMTGIRWIGVAPVPEGVH
>NC_009523.1|WP_011955716.1|1177633_1179355_-|acetolactate-synthase
MHGGDLVAQALQAHGVRFVFTLTGGHIAPVLVGCHQRGIRVIDTRHEATAVFAADAVARLTGIPGVAVVTAGPGVTNTITAIKNAQMAQSPLVLIGGATATALRGRGALQDIDQMTLMKSLTKWRRSVRRVRDLIPTLEEAFFRARDGVPGPVFVELPIDLLYDEQVVRQWYGLKRIGRSPAQWATWVSRSVWVHHLFAGAQQQAVVKPRPVPQREPDQRDIHAASLALATAERPLLLAGSQAVLDPASVDALARAITATGIPVYLSGMARGLLGANHPLQMRHRRREALREADLVILAGVPCDFRLDYGNHIPRHTRIIAANRSRTDLTLNRRPQIAVLGDPAHFIHRLSNAASNHNLERWQETLRQRDAGREAEIIRLSNQQTAYVNPLYLCRMINDALSDNSVIVADGGDFVATASYIVRPRRPLSWLDPGPFGTLGVGAGFALGAKLCRPDADVWLLYGDGSVGYSIAEFDTFTRHNIPVIAVVGNDAGWTQIAREQVELLHDDVATRLAHSDYDQVAAGFGAVGRRIDDPELVEETLQQAQQSAARGKPVLVNVLIGTTDFRKGSLSM
>NC_009523.1|WP_011955715.1|1176350_1177469_-|DNA-methyltransferase
MARPLLPTRPPAESADPDDLLHLARTSFTDALTRLRESESVATLRDALPMLWQQITDPSSSLRTPVGEADVTTFSKRRLRDALDQIGSAFTLERARYYLDRLARAAQETRTGRINDIDLNRWKEYDDILTDSLWLFDRRDASGAHHAGFWGNFVPQIPYQLMRRYTRRGDLVIDPFAGSGTTLIEGRRLGRHTIGVELNPAVVEQTRATLMHEPDRHGVVCALEVGDSTTLDWTALLEQYGRRSAQLVILHPPYHDIIRFSDDPRDLANAPSVETFLAMLGDVVARVAPVLDRGRYLALVLGDKYADGEWIPLGFLGMQETLRHGFTLKSIVVKNFEQTAGKRSQKELWRYRALVGGFYVFKHEYIFLFRKA
>NC_009523.1|WP_011955726.1|1186818_1188168_-|FAD-binding-oxidoreductase
MSSYDVVICGAGIAGVAAADALTARGASVLLVDERPPLSLTSDKSSECYRNWWPGPDNAMVALMNRSIDLIDALAHETQNAIALNRRGYLYVTTDPAQTAQLQHAGETAAALGAGPLRTHVRPDTYTPSIAHGFDGQPDGADLILDRATLRRFFPCLADAAVAALHVRRCGWLSAQQLGMILLERACSRSARLLRARVEAVEVTDGRVSAVWIDNQRIATGAFVNAAGPFLRRVGRMVGVDLPVFSERHLKVAFEDHLGIIPRDAPLLICADPQAIAWTDDERAMLADDPEAQSLLDVLPAGAHCRPEGGTGSTWVIALWAYDAAPVEETFPLPAAPYFFDVTLRGLTRIIPALEAYIHRPPRPTIDGGYYTKTRENRPLIGPAGPRGSFVMGAFSGYGIMAACGAADVLAAYLSGEALPAWAAAFHPARYDDPAYRALLDTWNDTGQL
>NC_009523.1|WP_011955727.1|1188426_1189374_+|ribose-phosphate-pyrophosphokinase
MSADDMLIFPGSGSPKLTKNICAYLGVTPGQCEVLRFSEGNLFVRILENVRGRHVYIVQSTAYPANDNFMELLFWIDAFKRASAASVTAVVPFFSYAKGDKKDEPRVSIRARVCADAIEAAGADRIVVMDLHAPQIQGFFKIPVDDLYALPVLCDRVRQMNLENLIVVAPDSGFAKKARKYARYLGVSMAVGDKERVAHDEHAHIVEIIGDVQGKTALIVDDFTISAGTLVEVAEQLLVRGAKEVYAAVTHGVFARGSMERLADSPIRRLFITDTVETQPITLTPQIEVVSVAPLFGEAIRRIHYRESISVLFPR
>NC_009523.1|WP_011955728.1|1189386_1190223_+|MBL-fold-metallo-hydrolase
MPGTQDISRATLAVTSLASGSSGNALLVRSRNAAILVDCGVPLRTIERALMRSGLSPDQLSAILITHEHGDHTMSAGPLARRYGVPLIANQATLAAMEHDLTGATVRELATGTATMIADIHVGSFPVSHDAAEPVGYTMSVDGWCVGIATDLGRWDDVVVNGLTPADLVVIEANHDQERLWRAPYAGVVKQRIYSPTGHLDNVAAGRLLARLGTDGRRRSAWLAHLSQEANSPQIAEQVVRGVLALAGVRCVSVTALPRRTPMHWSSDMHGEQLALFD
>NC_009523.1|WP_011955729.1|1190437_1190809_+|hydrogenase-maturation-nickel-metallochaperone-HypA
MHELSIAHSLVEIAEEAAAKAGVARVTVVHLRLGTLSGVVRDALLFGFDVASAGTRLEGARLEIEEVPLQVYCETCDTVVALPDVRYFRCPQCGAACRRIVTGQEIELAALEYEDDTPEATAS
>NC_009523.1|WP_011955731.1|1193236_1193848_+|riboflavin-synthase
MFTGIVEEIGTVETLAEVAGGWSLTVQATTVLEHTRLGDSLAINGACLTVTNLTDHSFTVGLSPETLRRTNLGDLKPGDGVNLERSLALNGRLGGHFVQGHIDGTGVVRAFHPEGDSLWVAVAAPAALLRYIVPKGYIAVDGTSLTVVDVLDDAFTFMLVAYTQQHITLPRKSIGSRVNLEVDMLSKYVEKFMHEGNYGNRQR
>NC_009523.1|WP_157041253.1|1194638_1195142_+|6,7-dimethyl-8-ribityllumazine-synthase
MGRTFEGHLVGAGMKFGIVISRYNDTIGKELLRGAQDTLIRHGVARNDIDVAWTPGAFELPQAARWMARRTEGAVQRAYYDAIICLGVVIRGATPHFEYVAGQAASGIASAAFETDIPIAFGVLTTENIEQAFERAGTKAGNRGAEAALAALEMANLRRVLASTGEG
>NC_009523.1|WP_083763262.1|1195544_1195976_+|DUF1641-domain-containing-protein
MNLYFVRVVTTINHHFFRAAPRDDLIDNDVLPLIAVVPQFTELVEQIGLFVASEEFRILLTSGVFDPDTVTLVGRAGDAFVATYNEDRQAQRRLEPVGLVRALYDPDVQRVAALLVDFARRFGKSLNNNNNGRVQNNGNATTP
>NC_009523.1|WP_011955734.1|1195953_1196661_+|hydrogenase-nickel-incorporation-protein-HypB
MATPRLLEIRKGVLSKNDRLAAGLRARFLQSGVFVVNLLSSPGAGKTRLLEETLRRMHGRLRVAAIVGDLATDNDAQRLARSGAPVRQIQTGDMCHLEAHLIEQHLEGWNLDELDVLFIENVGNLVCPTGYDLGEAARVVILSVTEGEDKPLKYPGAFISADCIVVTKIDLAEAVEFDMRAVEANIAAVHPGVPVISTSVRTGAGLDDWIAWLDARRYETMAVGTPSPGSREGLT
>NC_009523.1|WP_011955735.1|1196999_1197269_+|HypC/HybG/HupF-family-hydrogenase-formation-chaperone
MCLGIPGQVKEIYEMNGIRMGKVDFNGIVKDVCLAYLPDINVGDYTIVHVGFAITRLDEQSALETLALFESIGLLDEELRTDSAKEEAA
>NC_009523.1|WP_011955736.1|1197265_1198381_+|hydrogenase-formation-protein-HypD
MKYLDEYRDPELAQRLFAEIRRITTRPWAIMEVCGGQTHSIIRNGIDQLLPEEIELIHGPGCPVCVTPLEIIDKALAIASRPNVIFCSFGDMLRVPGSAKDLFRVKSEGGDVRIVYSPLDAVRLAQQHPDREVVFFGIGFETTAPANAMAVLQAHRLGLRNFSMLVSHVLVPPAISAIMESPTNRVQGFLAAGHVCSVMGTWQYQPLVERYRVPIVVTGFEPLDVLEGIRRVILQLESGRAELDNAYERAVRSEGNVAAQQVLSEVFEVTDRAWRGIGVIPQSGWRLRDAYRAYDAETRFAVSDIQTRESPICRSGEVLQGMLKPNQCAAFGKECTPRTPLGATMVSSEGACAAYYQYGRFIKAEEVGVAR

Crispr_ID: NC_009523_18

• CRISPR_ID: NC_009523_18
• CRISPR_location: 1228958-1229028
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_18

Consensus_repeat	Method
GTGGGTGTATTGGTCGGCGTCGG	CRISPRCasFinder

spacers of NC_009523_18

>18.1|1228981|25|NC_009523|CRISPRCasFinder
GGTCGCGCCTCCACCGCTCGTCGGG

CRISPR arrays and Neighbor proteins around NC_009523_18

CRISPR arrays

The CRISPR arrays of NC_009523_18

>merge|NC_009523|18|1228958-1229028|CRISPRCasFinder
GTGGGTGTATTGGTCGGCGTCGGGGTCGCGCCTCCACCGCTCGTCGGGGTGGGTGTATTGGTCGGCGTCGG

>NC_009523|18|16|1228958-1229028|CRISPRCasFinder
GTGGGTGTATTGGTCGGCGTCGG	GGTCGCGCCTCCACCGCTCGTCGGG
GTGGGTGTATTGGTCGGCGTCGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041333069.1|1223854_1225681_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223910
NC_009523.1|WP_011955766.1|1230560_1231436_+|DUF2085-domain-containing-protein	unknown	unknown	gnl|CDD|378277
NC_009523.1|WP_011955768.1|1231943_1232723_+|thioredoxin	unknown	unknown	gnl|CDD|200072
NC_009523.1|WP_011955770.1|1234528_1234693_+|50S-ribosomal-protein-L33	unknown	unknown	gnl|CDD|179075
NC_009523.1|WP_011955759.1|1221092_1221473_-|response-regulator	unknown	unknown	gnl|CDD|381116
NC_009523.1|WP_011955754.1|1217143_1217803_+|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NC_009523.1|WP_011955762.1|1225775_1226324_-|chemotaxis-protein-CheW	unknown	unknown	gnl|CDD|223905
NC_009523.1|WP_011955763.1|1226458_1227112_-|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl|CDD|235457
NC_009523.1|WP_157041255.1|1220709_1221072_-|anti-sigma-regulatory-factor	unknown	unknown	gnl|CDD|340411
NC_009523.1|WP_011955765.1|1229466_1230372_-|sortase	unknown	unknown	gnl|CDD|377241
NC_009523.1|WP_011955757.1|1220254_1220695_-|chemotaxis-protein-CheW	unknown	unknown	gnl|CDD|223905
NC_009523.1|WP_011955767.1|1231445_1231766_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955769.1|1232783_1234349_-|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl|CDD|341259
NC_009523.1|WP_011955774.1|1238551_1239079_-|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NC_009523.1|WP_011955773.1|1237335_1238085_-|hypothetical-protein	unknown	unknown	gnl|CDD|236884
NC_009523.1|WP_011955772.1|1236512_1237403_+|DNA-repair-protein	unknown	unknown	gnl|CDD|225140
NC_009523.1|WP_011955760.1|1221485_1223837_-|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl|CDD|223716
NC_009523.1|WP_011955756.1|1219217_1220258_-|chemotaxis-specific-protein-glutamate-methyltransferase-CheB	unknown	unknown	gnl|CDD|234828
NC_009523.1|WP_011955755.1|1217814_1219221_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|224271
NC_009523.1|WP_011955771.1|1234959_1236516_+|DUF4127-family-protein	unknown	unknown	gnl|CDD|379257

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_041333069.1|1223854_1225681_-|HAMP-domain-containing-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.73057e-48
NC_009523.1|WP_011955766.1|1230560_1231436_+|DUF2085-domain-containing-protein	gnl|CDD|378277	pfam09858, DUF2085, Predicted membrane protein (DUF2085). This domain, found in various hypothetical prokaryotic proteins, has no known function.	3.6753e-18
NC_009523.1|WP_011955768.1|1231943_1232723_+|thioredoxin	gnl|CDD|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	1.42157e-45
NC_009523.1|WP_011955770.1|1234528_1234693_+|50S-ribosomal-protein-L33	gnl|CDD|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	1.33713e-17
NC_009523.1|WP_011955759.1|1221092_1221473_-|response-regulator	gnl|CDD|381116	cd17574, REC_OmpR, phosphoacceptor receiver (REC) domain of OmpR family response regulators. OmpR-like proteins are one of the most widespread transcriptional regulators. OmpR family members contain REC and winged helix-turn-helix (wHTH) DNA-binding output effector domain. They are involved in the control of environmental stress tolerance (such as the oxidative, osmotic and acid stress response), motility, virulence, outer membrane biogenesis and other processes. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.43881e-29
NC_009523.1|WP_011955754.1|1217143_1217803_+|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	2.51802e-55
NC_009523.1|WP_011955762.1|1225775_1226324_-|chemotaxis-protein-CheW	gnl|CDD|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	1.37806e-21
NC_009523.1|WP_011955763.1|1226458_1227112_-|aminoacyl-tRNA-hydrolase	gnl|CDD|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	2.62302e-100
NC_009523.1|WP_157041255.1|1220709_1221072_-|anti-sigma-regulatory-factor	gnl|CDD|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	4.53334e-05
NC_009523.1|WP_011955765.1|1229466_1230372_-|sortase	gnl|CDD|377241	pfam04203, Sortase, Sortase family. The founder member of this family is S.aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall.	3.38422e-36
NC_009523.1|WP_011955757.1|1220254_1220695_-|chemotaxis-protein-CheW	gnl|CDD|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	1.1744e-16
NC_009523.1|WP_011955771.1|1234959_1236516_+|DUF4127-family-protein	gnl|CDD|379257	pfam13552, DUF4127, Protein of unknown function (DUF4127). This family of uncharacterized bacterial proteins are about 500 amino acids in length.	0
NC_009523.1|WP_011955769.1|1232783_1234349_-|long-chain-fatty-acid--CoA-ligase	gnl|CDD|341259	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD. This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.	0
NC_009523.1|WP_011955774.1|1238551_1239079_-|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	3.3488e-18
NC_009523.1|WP_011955773.1|1237335_1238085_-|hypothetical-protein	gnl|CDD|236884	PRK11234, nfrB, phage adsorption protein NrfB.	5.59026e-05
NC_009523.1|WP_011955772.1|1236512_1237403_+|DNA-repair-protein	gnl|CDD|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	5.6471e-48
NC_009523.1|WP_011955760.1|1221485_1223837_-|hybrid-sensor-histidine-kinase/response-regulator	gnl|CDD|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	1.19507e-96
NC_009523.1|WP_011955756.1|1219217_1220258_-|chemotaxis-specific-protein-glutamate-methyltransferase-CheB	gnl|CDD|234828	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB.	1.02716e-111
NC_009523.1|WP_011955755.1|1217814_1219221_-|tetratricopeptide-repeat-protein	gnl|CDD|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	3.26045e-79

Protein sequences

>NC_009523.1|WP_011955763.1|1226458_1227112_-|aminoacyl-tRNA-hydrolase
MWLIVGLGNPGDTYARTRHNIGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALALPQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIITLLGSQVFPRLRIGIDRPPPAWDLADYVLGRFTPEQEAQLPDIMQKAADALETVVREGMAVAMNRINAPPPKPKREQKRSSDAPDSSSDTNTSNASDG
>NC_009523.1|WP_011955762.1|1225775_1226324_-|chemotaxis-protein-CheW
MNTNDLRTFQSQPELRAILEERARALAAHDVTDTATGGEVMIRFRLGDERYALPARYAREVQPLRAYTPLFRAPPFIVGLVNIHGRLLTCLDLRPLLDLPVDPPSPGSFLIVLQGTGGDAVLLADSILDMTSDTPELSPAPVTTANAAISWIRGVDRDLSIVIDPVALLADPRLIVDHQAVA
>NC_009523.1|WP_041333069.1|1223854_1225681_-|HAMP-domain-containing-protein
MKLSIRFKLLGASGLTLALMIVLGVIALYQMDLMNDRAQHLSGNIVPATRTSSDMRRIVNRHRSLAAVRIADPRPEQVTRTNSERRELETEMEALLQKYETFIVTDIERELYTRIRKNWSAYIEEVGTKIFETDDPQSALAVFVGLKPLFDQLNQDTTALERENNRQALEATGAAQEAYRSATMTITGLLVVALVVSAVVGIALASMIARSIGRLTEATNAVAQGDLSREVQVSSDDEIGMLAAAYNQMVASLRASRAAEAEAREAEARLRQAEAESRRMLEETVAEYLAFTRRIAEGDLSRRLEVRQNGALGQLGEGLNAMVASLHTMTLQIQQANAAIASAAAEILAATTQQAASATEQSAAITQTSTTIEEVKAIALQTARQAAQVAQDSQTALQVARQGAKAVEDTINGMGQIRARVESIAQTILSLAEQTQAISAITTTVAELADQSNMLALNAAIEAARAGEQGKSFAVVAQHVRDLAERSKAATVQVREILSEIQRATNAAVMVTEEGTKGVEQGVSLATRAGQVIHQMSNEVESGAQANVQMAAAAQQQTAGMDQIAQAMTSIQQATTQALASTRQAERAAQDLHTLAQSLQATIARYRL
>NC_009523.1|WP_011955760.1|1221485_1223837_-|hybrid-sensor-histidine-kinase/response-regulator
MENDDDIMAQVFAAFCEEQAEHRAAIASLLLEMEQHPDHPDDRALVDQLFRAAHSLKGSARAAGLPGIEQIAHAIEDLFAALRERRLRVTPAWCDPVYAALDVIGVLVDRAIAHHPPDDALIETTVHRLRAVLAQPPSEQELAERTEGAAIPGDETSVVSAGLPAAPTGIGEVTTVRLAIEVLDTLLNDVGELMTGVMRIRAQARRIQDLSGMSAPWKRLWRQVRPLVAQYQARSNAFHPVVHHLDIRPITPERSGDGLQQRDLQQLAGALTRAAALIDEIDQQLTACARDLAADQSMLSAVTDRLHLQIRRARMLPLRTIFQPLRLVARDVSRGAGKPVDLFFDDGGAEADRQVLDTLREVLTHLLRNAIDHGIEEATVRQRHGKPERGAVRLNATVDGDWLTIEVADDGAGLDDEAIRRRALELGLLTATDLERLTPTDVANLIFLPGFSTRTTASHLSGRGVGLDIVHSHIERMQGRIQVHSAPGAGCRFVLSVPVSLTSAHGLLVKLGQHTCAVPLESIQRIVAVQPGDVRVLEGRTVVLVDGRPVVLVHLADLMEAGDGMRSFSRGEERRPALLLGSGSERQVACLVDGVVGEQELVVHRLPFPIRRVQFIAAAAILPDGAIAPILDTVDIVRAASGAQRLPAPVTPDISQQRRIPQILVVDDSLTTRMLEKNILEAAGYQVHLATDGVEALDVLQRLSTNGGCDLVISDIDMPRLNGFELTEKLRAGERFKHLPVVLVTSLDAPEHRERGVTVGADAYIVKRAFDQQTLLDTIARLI
>NC_009523.1|WP_011955759.1|1221092_1221473_-|response-regulator
MTPHILIVEDSRTQALRFQLELQRCGARVDIARDGIQGWECARALRPTAIVLDIDLPGIDGYTLCQRLKQEPATSAVPIIMLTHREDARSAQTGLEAGADDYIPKDEFAEQNLIESLRALGVLTQT
>NC_009523.1|WP_157041255.1|1220709_1221072_-|anti-sigma-regulatory-factor
MAPDTHQVRVASGYDVVLVRQHMRQMAREAGFNLPSQARMTAVVSEIARVALEHHWNAHFTFRLSCHRGWSVIEVQCISDSIRRDGNTLAHLTHDVQALVGDNVLTTNQAAGQLTLRFHT
>NC_009523.1|WP_011955757.1|1220254_1220695_-|chemotaxis-protein-CheW
METQMTMQTLVVCRIGVQDYALPLDDALRVVRLPALTAVPDSRPEVCGLINLNGRHLPVIDGWRLVGEPPHYDVTNHIVIIGDDQDHTTPALGLLVDEVYGLAQHPSSAIHPLRDNYAGALFCGIIHLEQRSCLVFNVAELRRMVL
>NC_009523.1|WP_011955756.1|1219217_1220258_-|chemotaxis-specific-protein-glutamate-methyltransferase-CheB
MNKAASPIRVLLVEDSPGQRALLVGLLNASDSFTVVGVAGNGRQAVQETLRLRPDVIAMDIHLPLMDGYEATREIMQRCPTPIVLISASAGEKKLIDALAAGALTVIRKPGGRHADPDERETFLKTLRIMAGVRVVTRFAPRVPPRSSTGHVQKAPAPGAAQVLAIAASTGGPAAVQTVISGLGAQFPLPVLLVQHIARDFVAALQDWLQRTTPLPVRVATHGERLAPGCLYLPPDGFHLLAGRRGFVELRPALAGDRYCPSADLLFHSVAQAYGAHAIGVILTGMGDDGARGLKELRDRGAVTIAQDEASCVVYGMPRSAVEAGAVVQVAALDEIAPHILTLIPA
>NC_009523.1|WP_011955755.1|1217814_1219221_-|tetratricopeptide-repeat-protein
MSTTLTSDLFRRFRDLLLTRSGLYFPDHRQNDLHHCLMSVLPATGCTSLEALYTAAVASERVLHTIIESVTVGETYFFRNASQFAALRDRIIPDLIARREAIRSLRFWSAGCSTGEEPYSLAILLRDTLPDFDNWQITILATDINAGFLERARAGVYGAWSFRETEPTVRDRYFEPVEVARWRIRSDIRRQVLFTRLNLVEDEYPAVMNGTSMQDVILCRNVLIYFDDETIRAVVRRLYRALTPGGWLIVGHAEARSDFFARFEVINCPGTVIYRKPLNAPLFDETAVPPLSPARTTPVSLPNVSSSDVSSDLPALPVALSSSEPAPVRAADADAQAFDDLQAARQAADRGDLEEALRLCATIIQREPLRAEAHLLTGQILEQQERFDEALAAYRRAIYLDHTLYLASLAMAGILQRTGHTDDARRAYQRLLRSLATLQPDAPVPSLNGATAAELQMFIRNRMAALGS
>NC_009523.1|WP_011955754.1|1217143_1217803_+|phosphate-signaling-complex-protein-PhoU
MRARVHFDEDLETLTAELYNLGDMVIQAIRESFQALSRRDMQRAQRVIEHDREINQVERDIEAHALRLIATQQPVASDMRRLIVAIEIAGELERIADYAKGIARMALRDTPAPEPALPAEMERMARMAMAMLQKALDAFAARDSATAEMLAADDDEVDRLYECVETMLTHQMAQNPLTVAWNAGLLFAAHYLERVADRATNIGERVVYLVKAQVVELNP
>NC_009523.1|WP_011955765.1|1229466_1230372_-|sortase
MSVQPPRQSSSTHQEDETLLETLISTPLAPTKAWQKPIVLRSLDEHRRYALKGYRLRTWVDHWLHHAERLFSIAALLIFIVWAVDGPIRDWWRAQQAVRHAAPVQAALRATAVVRVSAPATPDRVVPANVPLPFTTPDMQQPLASEGFLAPRAIISAPEDGQRGSLPHRLIIPDIDLDTPVIEVFVVDGAWQVADYAAGYLHGTGLPGDPGNMALAGHAGLRGAVFRDLGRLRAGADIFVDAGSWRYQYRVRDTRNVWPTEVNVLDPTPTPTLTLITCTNWDTQRLIVIGDLVGAQLLTGD
>NC_009523.1|WP_011955766.1|1230560_1231436_+|DUF2085-domain-containing-protein
MREHQPSSSDPVTERVIAEVHATLAARSEAIRMRRAEEDHRWRMFFLIILIALITAIFFVPAPTLERKLILILSGVCAQQHNLFVGGIQLPLCARDTGMYLSVLATLGVIRLRGRTRAGALPPWHILASLIGLVALMAVDGINSTINEIGMTPWYEPRNDLRAATGMGAGVGLAVALTLLFNRSLRRDVAVNLPVLGQWRELGMIALINTAILTAILLDVGLLAWPLALLDLIGVAGTLFVTAVTAIAAVMNYDGTITRVTQLARPATFALLATGAFLAGMALIRATLMGG
>NC_009523.1|WP_011955767.1|1231445_1231766_-|hypothetical-protein
MFWRRTSAVRASNVTAPSQQELQHLHEQAINRRYDLRVCNPAHGGFYAYMARYKDTVNDADALDHLAEEIVARQARLTHDPGLYESFGRLAELARWRARMLRSGHS
>NC_009523.1|WP_011955768.1|1231943_1232723_+|thioredoxin
MAFATPVRTSEQSIDRVLRAGLPVVLIFDRHGCPTCQQLDGVIERLAKLFAGRVLLARVDADDNPALVRKYAITALPGLVFVKNGAPVAQTTGAVAEESLRAWLTYLAEGGTQPPLPAGPSVPLRRPVAHPTSDVRAARQEAEERGVSAMPVTLSDATFDQIVARSDQPVLVDFWAPWCGPCRAVAPAVERLAQEFAGRAVVAKLNVDDNPRTAQRFGISSIPALYIFKGGRVVERLIGAQPYPVLRQALARHAGTVAA
>NC_009523.1|WP_011955769.1|1232783_1234349_-|long-chain-fatty-acid--CoA-ligase
MLNLAILLEESARRTPGKTAVILDSIRLNYAELNGAACKIANGLTKLGVRPGDKVAIMLPNTPHFVMCYYGILKAGATVVPLNVLFKRHEVEYHLEDSDSVALIVWEGFLDEAAYGFRMAETCRHLIVAQAPGSTATLPDGAIPLGNILAENPHVFDTIQTMPDDTAVILYTSGTTGRPKGAELTHANMFLNATICADKLLDISSDSVGLAVLPLFHSFGQTCVMNTLLYLGGTITLLPRFEPQKALEVMARDRVTYFAGVPTMYFYLLNFPNADQYDLSALRFCVSGGAAMPVEVMHAFNRKYNVTILEGYGLSETSPVASFNHLDREPKPGSIGIPIWGIEMRVVDSEGREVPNGELGEIVIRGHNVMKGYYKRPDATADAIRNGWFYSGDIAYRDDDGFFFIKDRVKDMIIRGGFNVYPREIEEVLYGHPAIAEAAVIGVPDPALGEEVKAVVAFKPGQTATEAEIIEYCKERLAAYKYPRFVEIRDTLPKTATGKILKRELRQVDTGVSQMEATASA
>NC_009523.1|WP_011955770.1|1234528_1234693_+|50S-ribosomal-protein-L33
MASKKGNRIIIKLRSTESAHTYTTTKNRKNDPNRLELRRYDPTLRRHVIYRETK
>NC_009523.1|WP_011955771.1|1234959_1236516_+|DUF4127-family-protein
MRVGLLPLDERPVNTRYPAMIAAIAGVELALPPDDLLSHLREPARCDDLAAWLRAIAPALDALIVDVEMLAFGGLIASRISDDPPGAVVSRLDVLRAIRAELPDLPILAFNVITRISNANACTEEPLYWETYGTRLYRLSQLLDRAAQGEPLLDEIAALRDEIPPEVLRDMLRRRLRNHIVNLASLHLLDSGAINLLVLSSDDTSPFGLGSREKRWLASWAELLTLGRDHPLTDGQDQALQTPGTLLMYPGADEVGCALLARVINQHTRRTPRIAPLYAIPGGEEIVAPYEDGPVRLTVERQIQAIGGTLATGDGEPDLWLAVNTPSPRRTEWDESFAAEERDERYDHLDALVDRVHELQEHGQKVIVADVAYPNGADPVLMELLIEKVDLLKLAGFGAWNTAGNTIGTALAQGCAALLATTPVQQIAHLRFLLHRFVEDWGYQHVVRRAARALLERMAGVHEPDDTTIGAICRWIETHLNARIGALPGFAGRWRVTPGSTRLPWNRLFEVDFALELV
>NC_009523.1|WP_011955772.1|1236512_1237403_+|DNA-repair-protein
MTDYRALGERLLACFAALDEHFGHEPHWWPVITDDPPFEVLVGAVLVQQTRWETVETAIIRLRDAGLMSPERLATVTTDSLAALIRPCAFHAQKATGLHAICREIVQEYDGDTTRLLTGDRMTVRNRLLALPRIGRETADTIMLYGGGWSLFVVDAYARRLFARLDLAPGFDFLRAPYDAVQRLVEHALIPLLPEVSITVRENFHVHRAIEANGSSTFFFAQFHALIIEACVHHCLARHPRCNQPGARRTFADPRKCATHCLTCSGCPLRERCAFNGTATAHRAAAAPVRVPVDRA
>NC_009523.1|WP_011955773.1|1237335_1238085_-|hypothetical-protein
MNDTLCPRPCPAVAAMRNDFNALRDHLATGHRCVDAWLALADLVTVPAHRLDCLARASALAPDDIELEITYLEQRLIIDPGDTEASGALRAARARRVLMGHKPRIFKQMDASPTLGSILVQMGAITQQELEWLLEEQAAIRRRGEQMMFGDVAIARGKVTPETLARALMTQIQQRIGNDAAPRALGEYLIASGLPPERLEQALTEQIYLRRVGRRETLGEILIRRRWITRDQLERALAQQQHDALSLFR
>NC_009523.1|WP_011955774.1|1238551_1239079_-|histidine-phosphatase-family-protein
MLNELFLIRHAAPDRTTGLPYTVMPGPPLTLRGEEEAVQAGHWLRDRGIERLLSSPFTRTVATATVIGQLIGLTPTVIEALREVAPGEQHSEVRARIADLLNQLDDTPLQRVALVTHGGCILAALHYTTGDRIDLSGHRYDNGNHAPTAGIWHGVRTDQGWRWSLAFRPDMAVES

Crispr_ID: NC_009523_19

• CRISPR_ID: NC_009523_19
• CRISPR_location: 1257689-1257873
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: WYL

Consensus repeat of NC_009523_19

Consensus_repeat	Method
ATAAATAATCCGGTATAGCCCGCGCCGGCGGGCTTCGCCTTGGATAGCCGAG	PILER-CR

spacers of NC_009523_19

>19.1|1257741|18|NC_009523|PILER-CR
AGGGCTTATGGTCTTTGA
>19.2|1257811|16|NC_009523|PILER-CR
GGCTTATGGTCTTTGA

CRISPR arrays and Neighbor proteins around NC_009523_19

CRISPR arrays

The CRISPR arrays of NC_009523_19

>merge|NC_009523|19|1257689-1257873|PILER-CR
AATAATCCGCTACAGCCCGCGCAGGCGGGCGTCGCCTCGCAGAGCCGAGGGCTTATGGTCTTTGAATAAATAATCCGGTATAGCCCGCGCCGGCGGGCTTTGCCCTGGTTAGCCGAGGGCTTATGGTCTTTGAATAAATAATTCGGTATAGCCCGCGCCGGCGGGCTTCGCCTTGGCTAGCCGAG

>NC_009523|19|2|1257689-1257873|PILER-CR
AATAATCCGCTACAGCCCGCGCAGGCGGGCGTCGCCTCGCAGAGCCGAGGGC	TTATGGTCTTTGAATAAA
TAATCCGGTATAGCCCGCGCCGGCGGGCTTTGCCCTGGTTAGCCGAGGGCTT	ATGGTCTTTGAATAAA
TAATTCGGTATAGCCCGCGCCGGCGGGCTTCGCCTTGGCTAGCCGAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955789.1|1265999_1266848_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955783.1|1255943_1257368_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|379575
NC_009523.1|WP_157040977.1|1259161_1260241_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955775.1|1239163_1241512_+|hypothetical-protein	unknown	unknown	gnl|CDD|132846
NC_009523.1|WP_011955786.1|1260296_1262303_+|AAA-domain-containing-protein	unknown	unknown	gnl|CDD|223786
NC_009523.1|WP_011955778.1|1246785_1250583_+|thrombospondin-type-3-repeat-containing-protein	unknown	unknown	gnl|CDD|379155
NC_009523.1|WP_011955774.1|1238551_1239079_-|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NC_009523.1|WP_011955787.1|1262304_1264614_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955781.1|1252102_1254082_-|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NC_009523.1|WP_041333087.1|1265660_1265885_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955788.1|1264632_1265664_-|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009523.1|WP_011955780.1|1250951_1251467_+|DUF3592-domain-containing-protein	unknown	unknown	gnl|CDD|378822
NC_009523.1|WP_011955790.1|1266844_1267501_-|thiaminase-II	unknown	unknown	gnl|CDD|381700
NC_009523.1|WP_041333079.1|1242720_1246272_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|226156
NC_009523.1|WP_157040976.1|1251476_1251629_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955791.1|1267799_1268594_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009523.1|WP_011955776.1|1241857_1242502_-|ribonuclease-HI	unknown	unknown	gnl|CDD|260010
NC_009523.1|WP_083763263.1|1254082_1256122_-|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NC_009523.1|WP_011955792.1|1268663_1269458_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009523.1|WP_011955784.1|1258610_1259111_+|DUF4365-domain-containing-protein	unknown	unknown	gnl|CDD|379535

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011955788.1|1264632_1265664_-|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	1.6e-24	81.6	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955783.1|1255943_1257368_-|tetratricopeptide-repeat-protein	gnl|CDD|379575	pfam14353, CpXC, CpXC protein. This presumed domain is functionally uncharacterized. This domain is found in bacteria and archaea, and is typically between 122 and 134 amino acids in length. It contains four conserved cysteines forming two CpXC motifs.	2.91505e-25
NC_009523.1|WP_011955786.1|1260296_1262303_+|AAA-domain-containing-protein	gnl|CDD|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	3.20912e-08
NC_009523.1|WP_011955778.1|1246785_1250583_+|thrombospondin-type-3-repeat-containing-protein	gnl|CDD|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	2.67139e-31
NC_009523.1|WP_011955774.1|1238551_1239079_-|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	3.3488e-18
NC_009523.1|WP_011955781.1|1252102_1254082_-|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	8.17233e-15
NC_009523.1|WP_011955788.1|1264632_1265664_-|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	9.12707e-21
NC_009523.1|WP_011955780.1|1250951_1251467_+|DUF3592-domain-containing-protein	gnl|CDD|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	6.90381e-29
NC_009523.1|WP_011955790.1|1266844_1267501_-|thiaminase-II	gnl|CDD|381700	cd19365, TenA_C-like, uncharacterized TenA_C proteins. This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes mostly uncharacterized TenA_C- like proteins.	8.0787e-109
NC_009523.1|WP_041333079.1|1242720_1246272_+|tetratricopeptide-repeat-protein	gnl|CDD|226156	COG3629, DnrI, DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms].	8.23365e-27
NC_009523.1|WP_011955775.1|1239163_1241512_+|hypothetical-protein	gnl|CDD|132846	cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomonas. Even though VipD shows high sequence similarity with several functional regions of ExoU (e.g. oxyanion hole, active site serine, active site aspartate), it has been shown to have no phospholipase activity. This family includes ExoU from Pseudomonas aeruginosa and VipD of Legionella pneumophila.	4.33864e-06
NC_009523.1|WP_011955791.1|1267799_1268594_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	9.30401e-91
NC_009523.1|WP_011955776.1|1241857_1242502_-|ribonuclease-HI	gnl|CDD|260010	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability.	4.0867e-71
NC_009523.1|WP_083763263.1|1254082_1256122_-|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	9.56532e-40
NC_009523.1|WP_011955792.1|1268663_1269458_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	2.69627e-93
NC_009523.1|WP_011955784.1|1258610_1259111_+|DUF4365-domain-containing-protein	gnl|CDD|379535	pfam14280, DUF4365, Domain of unknown function (DUF4365). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, eukaryotes and viruses. Proteins in this family are typically between 182 and 530 amino acids in length. There is a single completely conserved residue D that may be functionally important.	6.48864e-30

Protein sequences

>NC_009523.1|WP_011955783.1|1255943_1257368_-|tetratricopeptide-repeat-protein
MPISHAELITLTCPACGTSHTADIWLIVAPDERPDLVEQIRNGTLHTATCPQCGQTRTLDAPLLIFRPTAEPPILFAPAQQTSTEQDQQHAAELIGILRQRLGAAWNDAWLGQGLTVVPRQILPLALADDPAAALQELAVQMQQALAELRRRDPEAFARLEAEAQQAMAALLAADQTPDEAPASAATTDAPALIQALDAFLNARTWIDSYRQVQAHPELLSDEALALLEQRIAAARTVGNSRAVAFFEEHLSLLRRCREVGIPRAFAAKMLPPETLAQAEAAGLTPAQAIEAAAQAMDIGSGVDVPSRFRNDLQQAKEAEQRYRRTGDRAALDAAAAAWQRVLDDPAFARSQERFQLAAMNDAGVIFLQRYWSVGHIADLNRAIELWQRAVELTPPDSPDRPARLNNLGTGLRARYARSGRLEDLDAAIAAWQQALDATPPDSPARLPRPPRSAEQPGDRAARPLCPQRAAGGA
>NC_009523.1|WP_083763263.1|1254082_1256122_-|CHAT-domain-containing-protein
MPAAGGWRTWMRPLPPGSRRWMPPRPTPPPDSPDRPARLNNLGTGLRDRYARSGRLEELKQARRSYALACKQGQLLAPESALAASQSWGRWAGERHYWKEAAYAFGFGLETIEQLHRAQLRRSEQELWLSAARGLHTSAAYALVRAARPSALRRAVEVAELGRARGLGETLARDRSDLSIIERQYPDIYERYRAAAEVVRSLERTDRATTDRQDEAQPSFTELANRIRAARADLDAAIEAIRAIPGYEAFLRPPTYAEIAAAAQPGVPLVYLITTPQGSLALIVPDGNAEPEALLLDEFTENDLKNLLLVRTGDEVVGGYLPGQLLGGKMLETALAMALPILGERLIAPLAQRLRALNATGVTLVPTGLLSLLPLHAATYRIDGSSRSLLDEFDVAYAPSARVLAIAQREQQRRAAKGVRLAGVGNPTGDLRYASAELHSICDLLPPAATTTFYEQAATRSAIWSALGESTIGHFSCHGSFADDPLDSALHLAAGDRITLRDLVAGDTTALSNLRLVALSACQTAITDFGRLPDESIGLPGGFLQAGVPAVVGTLWSVNDLSTALLMHRFYELHLHGDDAAGLAPQPPVRALRLAQQWLRDLTYKEMFDYFQRHRQLKAVRQHNSASVQVSGVRMPSALIEVGRALAEEYMLDHPNNRPYANPICWAAFTFNGAMEGAA
>NC_009523.1|WP_011955781.1|1252102_1254082_-|CHAT-domain-containing-protein
MAGEETIAALAAIWDECSSSARWPALLPELRQLVDQFQQSADEDTRAEIAMRITDLLLDTDPDLYQKLITMRKAMRAGEAHNRFSTRGMPSDAELSAAWQEIRTREASIHGESITTGNITGTGIAIGQGAQATVHQHFYEPRFTRHTDISCPRRAQVNSRVTVTVALTMQPQPESVACEAIEVFEGKVKVRIDAPGFEPLSPLEQTIIVERDDDSAPVVFHLKARETGPHEIAIQFWQRGNLIATVVAPIEVLEVEPVFAPALIPKTPVSPRMADVTPPDLTLVVFRDPAGRMQFTLHRDNVTLCYAEQTLRHPPDALLNALFDELHLLQRGTDSANRRRGSSLLTAEQVERRIRNLGYKLWDDLIPPELKLYYARERHQWQSAIAAGQRWSLLVQSNEPDIPWELVRPYSDGPDCWEEDFWCQTFHFARWLLKRPDSPESVVPLPRLRLRTLAAVVPTCYPELKAVPEEHKLLRDLIARYCLTDRSPQRATEAEVIALLETGGFDWLHVITHGDFFAQSALHSSAIGLDDNQWLASSAITGLRIRSALRNHRPAIILNACHVGREQPSLSGAAGWVTQFVGSGAGMMIAPLWSVNDEFAFRFSEVFYTALLNPDRPATVAEAMWQARNAIRQPDDPTWLAYSLFAHPNARVEVQPLQA
>NC_009523.1|WP_157040976.1|1251476_1251629_+|hypothetical-protein
MLDLDTSRIYSCSILPELPGCAGFQPASGATGGLLNQEEAMDATPARMMM
>NC_009523.1|WP_011955780.1|1250951_1251467_+|DUF3592-domain-containing-protein
MNVRVRSTNRIRGLWGDPIMLVIGLGILFLGLQWRTFTQNQIAAMLTSEGRVVEVISRTKTSGGERKTYFYPVVEFRTADGESVRFEGSTGSNPSSYRVGDTVRVRYDPQTPQSALIDSWELWLPSGIVIGVGGFFALMGILALLNALAVLLKWGGLLGLLGIILLRRRRT
>NC_009523.1|WP_011955778.1|1246785_1250583_+|thrombospondin-type-3-repeat-containing-protein
MRRALARIGLILGIALIVLSSVPPSRSTMAESASPTAVTNTLYLSGSGYLQVPNAPALNPSGGLTVEAWVRRIDTSTSCQTIVGKGYQTGFWLGICGNKLRFYSNGSLSWFDGATAFVSGEWTHVAATFDGTTRRLYVNGNLDAESVRVSPLPVNAQPLRIGADVGDIFSTYPFVGHLADVRLWGVARGRDEIRRDMVRLFEAPETGLIAAWHLEGTSADIFGNHNATGVGTYAFNDPAAPSTTHHPIKVPRLFVAPMVDGWCGSGEYGSGALRLRLPMWLDGVSYPPSPVWVNIGATSSNVYVCMERVEVGTSAMVVYLDPNNGGDAWAQADDRAFIVRADRTSQCRQGDGSGGYVNASSCDYQAVLPSSFEFEKSAEFRFPRSLLTGSPALFRLAFAHQGVGGTAGSDRVWPLGAAQNSPATWLTFVINDIDLPRSDSGNPTVSVRHSPDVVRRGTTVSFTATASDDVDIQSIDIIVGGIARRTCDFAGTNDRNGACTFSMTFRELGRQYYSARVVDHRGRIGFAPMSSFLVQVDGRAPVITIDHSPRRPAIGASVTINATATDPSGVRSITINSPSVRRCTFDGTRTTETCTVTVAPGGRRIVGYSASAIDSEGLSAYTSGVSILFGNTPTATRPDTDQDGIVDDLERLLGTRPDNPDTDRDALPDGWEVIGLDFGSEFVNLPALGANPLRKDIFVQYDYERGAKVEPETWPYVIELFRRHGITLHLTENERPRSFVPGRGAIGAEQAAATIDPATGQYYFPPKLSWTHHYIYSRYFPGRSGAWHHVTIDMRQCPEDVFDPDAPGCFDRPIWDQIYRIVHELGHNLGLGHGGRTGSGRQTRIGDIVYYEGAWNNTNMKPNYISVMNYRYNASHLCYREDTNQWFAATDFQSGSRFDLNEARLQENRIYELPRNVQCATADSAFVPVFEYSCTDPMGQRWIVLSDGRRTLGRQRGGQTRADTPDSDWQFTDLPSHAPGVDWNCDGTIQTATVSHNINGDGIEGMWGTGPANEILTSPDDWRGLPYGPGSGCWIVRDSSEAIRRVMPDAYRNAIGRSDCRIAPAAGMSALNAEASLLPEQPSAAGAPLNVYPPEPIEENDISLPPIPNLEQCNGVNDDGDDQIDEGCLDTDRDGIADAIDSCPQTPNPDQADANANYLGDACERPTLASLTLTPAPGNNALAWSGTATDVLGYNVYRQCEGEDTPALLGGDFPTTTAQSYTDATAGAAKCQYIVRVLNRNGVETDERIVGSLPMKVFIPLLLKQ
>NC_009523.1|WP_041333079.1|1242720_1246272_+|tetratricopeptide-repeat-protein
MIGPHHPHPSLELRVFGTPRLLLDQHDVPFRRRQPLAIMAVLALSERSVTRDELTYLLWPDSPQTVGRQRLRRLLSQLRQSVGPLADRLLTGEAGIGSGVIRFDASMCRVDAREFVRLSGQARTLPDPDGLRAAEQATRLYAGPLLSGLELEESPEFEHWLLQQRERFERMILDIWRRLVDGYASTGDFDRAIAAVEHALVLDPLSEMLHRKAIWLYAKTGRRSDAIRQFTVCVALLERELALEPDADTAALYRAILNNQLDTARSLAFRDQSLPSAIRSSTGRAEHTSPATLTTTLTADLVAAMRTALTGSSPVVVVEGPAGSGKTRMVRQALDQIRQTTTNLLVWLSGARRSGQQRPFGVMIDLLDTALRERLNHPDAERALPTDVRMTEAVRVLPELRAVFLRLQPIRQPTEESPSSHHLLQRRLLQALPRAVHALAGGEPVIVALEDLDQADPLSIEAVAWLARSLHGTNLALVITCRTAEGALNAMLSDLRARGMLQSLTLTAFDHPTVIGLAQHAGLPTTTAEQIWRQTGGAPLATREMVRAMVAAGKDLSALPLSLHEAIQIQLKSLAPTIRQVMEAAAVLQSGDALEIQQVSGRTADEVEHACEELQARDWLTFDGSRYVVAHPEVREAVLESLSPARRQRLHRQAALVMRQHNADPARIASHLESADQPDEAAAMWLQAARRARSLYARDAALTALQCGLGLVRDRHVLFELLSEQESILHEHGLRDEQRATLETLERFVEQSPDHPDWRAEVYRKRGRLALACNEWNAAIDALRRAAVFTLHSDWATLCLLARALGHNQQWHEADEILQRALALAQQQRDREAQARCWLTRADIEQGRERFDAAESALKHAVHLIEPSSPTLPQLMLNLGNMATVRNDFVSALTYGQEAQRLFAQRGAPDSEAAAWVLVARMHARLGQFEAAFEAYQSAYAGYAALELRQGMAAARINACTLALRIGNFDNGLRLAEEAWELFQAINDARGMCVTASNRGAALVWMGRGAEAEPWLRESYERAVAIPLPAQQAAALANLGAALLQQGRLEEARRLMEQGLALRVAQGHIDVSVDRAFLAIACLRLGDIEAADRYSLEAVEYLARAPQVENPQQVWFARAQVLRAQGLITEANNALQSAVECLYRSEQQLPPPYRERYRSVFSFNRAILHAFDNGVWPEPPMLV
>NC_009523.1|WP_011955776.1|1241857_1242502_-|ribonuclease-HI
MIEIFTDGACRGNPGPGGWAAVIVQNGEVIEIGGAEERTTNNRMELRAAVEALRRVPPNAPVRLTTDSEYLLHGATHWLLLWKKRNWLTTEQTPVEHRDLWEELDALADQRVTWQYVRGHSGDPWNERANTLAQAYADGRATGRSQGKARRHMSYLSLVHGVLARHATWEECRARVHGVSGARWKKCASPEEERETVIRWGMPVEALEELDAGE
>NC_009523.1|WP_011955775.1|1239163_1241512_+|hypothetical-protein
MSHDSTPVYTDADFIKDDLRRCDLVMKGGITSGIVYPPAIIELATRYRFVNVGGTSAGAIAAAAAAAAECGRDVPYAGYRSSFLRLDRLRAWLGEREDHIPGLFQPLPRMKPLFNVLLDLTIASRTQSQTSPGRPSTHMPGAGALRIPAIGMRFAWRALTLFLRSARVLIRHHPQVTLGVGVMVVLIVLAFQMLISISNDGFASPIHVVGWVASAILIGAIVGILAGAGHLVWLAVYELPRNLFGLCSGHVADASPTGWPPTLGDDQGRGRPPALTDWLHAVINGLAGRDARQPPLTFGDLERKGIALRTMTSNLSEHMPYVLPKDLGRFLFDPNEWARLFPDVVVEHLRAHSAGAVYRIADARGASQTLLPLPAWRDIPVVVGARMSLSFPLLIAAVPLYTISVAGQREASAGKTLRADHVQRHVFSDGGIASNFPIHFFDRWLPTHPTFGINLVQLPADEADNEQFLQTLLADDVAEAAAEPVQPGVTVKQAHLGRTDFRAAAPAPPPQMRSAAPFSDPRGEVYLPPAGPGDDYIEWRAIGSLPAFFWSIFGTAQNYRDTAQARLPGYNERVVRVRLKPDEGGLNLRMPRQTIAAIMHKGQLAGRALLPQEPEAAGRRRGGFTFDDHRWVRLVTLLSEIDQQLNDMRSAYDDVQADYATFLRNALTNDNLPVCPPYYAGSPEERALFARRIEALIALCTLWSDLDEETTARLNTILLRMNKRTLQDMARLLDQPDDQEALSGLHHWLAAMHAEKVRLAKAAERESSPVEDMIDLRVMPTI
>NC_009523.1|WP_011955774.1|1238551_1239079_-|histidine-phosphatase-family-protein
MLNELFLIRHAAPDRTTGLPYTVMPGPPLTLRGEEEAVQAGHWLRDRGIERLLSSPFTRTVATATVIGQLIGLTPTVIEALREVAPGEQHSEVRARIADLLNQLDDTPLQRVALVTHGGCILAALHYTTGDRIDLSGHRYDNGNHAPTAGIWHGVRTDQGWRWSLAFRPDMAVES
>NC_009523.1|WP_011955784.1|1258610_1259111_+|DUF4365-domain-containing-protein
MDLSRQKEQFSIAWVRAVVSVAGYAVYQPEVDDDSVDLGIAVRGGRGTVRSPRLEVQLKCTAEPIWQSDPMRFTLKKKNYDDLRGDDLLVPRMLIVVCVPEDVDRWIDQNEERMILQRCGYFLSLRTFPARSDGKASVTVPIPRRQQFTVAALRDIMCEIGQGRRP
>NC_009523.1|WP_157040977.1|1259161_1260241_+|hypothetical-protein
MAVYLQARRWREQERREGEYAIWQRTADDEPVEILLPLNTAYRDYAARIAGVLQTLEAVEQRSQLDILADIQTVGCDAIHMSAEGEALAGGAISLHGGTLFIAGVQNLMLAAACSAVQPRPVFYDPVPEAAMAYVQQVRISMGRGSFMVSIKAPVDLEATQTHIGKRKTSFARRTTLILMQSLSVVRDALDRSESGHAIETLLEVAPGGISANLCDALVDLYRGSQADQIRFSVTWSPLRRVPHDAVSDVTIPAGVVPLLQEASRILRETTPREGFILQGFVVDLEPESDHRQGRAIIEGLIDGDLHKVECDLAGMHYLRARRAFDRRQVIRCTGDLVQSGERYILRNPRNVTLLDEES
>NC_009523.1|WP_011955786.1|1260296_1262303_+|AAA-domain-containing-protein
MNDHLLPHSLGSALKPYVKLAALLEGVVATPEQIADRLMRVSPPLTPHLAAPPDPQALVRDLLHLRLIEPLENGMYRCWGHLAGAIEVQALRYVALTLLVPLPDGTYDLPVLRAPFDGLPHPPDAWPHHETLLPWYAEAGLVRQRHDGLWESLSDALQPQPADTACIRVLNAFLEQVCQARAWQTAAQPVDDALPPLDPALLNERIAEIQRELLIERDVILRIYRALIAGQHVVLSGPPGAGKTHLATLLPRVLWRDAEPTMVMLPVTDPRLPPDAPPQPTPVYRQGYFADLTTATEDWGVRHVIGGIAPQIVRDQGRTSLVYQVRYGCLTRAVLANYGSDGATLPKEFRRCEVRHNGVRYRGQWLVIDELTRAPIDAAFGGLLTTLGGQRAPLAVPADDGEAQVPLPRDFRIIATLNSFDRHFLHQISEAMKRRFVFIDILPPTGALAATEPAVALRNALRRLHELRVVERVATDGGNLAWEGFVTITAEDDAGDAVPRYRVTWHHADGERAFDHFWRIFRAIRVYRRLGVAQAEAVCTALISGVVVGMAWDAALDAALADTLADQLQVLTRDEQAVLLAYLDHAGDAERFTEQVRAILSELPVARQRSHLALLSDADPAQNLTDLDLQLIDAALLQRMFALDSSLLIDGRSLFAQRLRTFVAERGL
>NC_009523.1|WP_011955787.1|1262304_1264614_+|hypothetical-protein
MEAATRSPLEREAFSAMQARLVALLLRYDEAGFRRRVSARRDYAAERDEHLLKPYRVLGALFALRDDLFDDIVPRIVRRLSFTAPHRLVVEEPPARGRVHWERTLDAVWDERPGEPPLLLYARQRWRDFATPENLLTVATLLEYRAAAQDLLWEEARVSRSAALRHPLHELVERCERELAFPQFAGIRARAQRIVEGDEGGVAELERRVREWLIPGSNSAYQDLLTWRARLASLRLLRRDELARDETLGADPARDNYLYQVWIFYELADLLAAPDIARLDSLDPTPGQMMLRFRWGEGNDVRRYELRHDQSVPCAPDGWEAEPRQRSAVPGVRPDFYLWRIDPPSERVEHNGALIWREPGMVWDAKYYRERESPNAPSLPVKRMVADLALLGEAWGALLFAFLVDGGEASGYRLRPVDWNQRTAPDQEIVVQPLRPALDPRHVRATLTALIDAAHARLRTPRTPRCSGVFLDTLSLEERGALPGRDGAVLAADDLLICPKPHIGAWRIDLVSRAAHCCRDARFCHIISQPGATPPVRPPRTAVELLAEMERLFLTGDVGDLSEETVVQVSERIESLTRRFAQFTGALNHLGRYEAQLGDMGLDRTLHLLAPSERESLALAIYLRDQLDEVQAGDYSAPVIHIARVFERELQRRLMAIPDIPPDAFPHGKPTLGSLGGVRRKHPLAWQVIEAHLRRIWNGVVDDADPNVVVTVDQFIDEIEHLSRARNQAAHTTPIPRERFRNILRTLCSAGPLRVGALNVLLIAWRVEG
>NC_009523.1|WP_011955788.1|1264632_1265664_-|WYL-domain-containing-protein
MTRYGGGIKRSSQLTFRRRLLLVRLLLRGPATAEELIEAIQRELGTEGYPAAAQVALRHDIKALKTEYGCRITLRRDVGGYVLEDLGELALLDLSDEALEAFSFLDASFPPGAAIPELANVRQLLDQVLRLLPVERQEEQRRRRSAPRLQLPAQPESRVDPGVLRTVKRAINERRELRFLYWSTFDIDAPRQHRVAPYGIFFRPEGHTYLDATLLEVKPVGGETIHAAIDYRLDRIVPGSVRVLPTMLPPERIVPRFYPLRYHLLPVVARRRDVAAYFPNTQIEYHDDGSATVTATVTNLWQARQVLLRYGDACTVLSPPELIEMFRRTAQGLWEKYGSATEG
>NC_009523.1|WP_041333087.1|1265660_1265885_-|hypothetical-protein
MSNPSPEDTAMLRLIECWMPLVQELNQTEQWDDDGVALERLIRLAAPVLAAVDHVQSARAILMVYHAIARKEPL
>NC_009523.1|WP_011955789.1|1265999_1266848_-|hypothetical-protein
MTQRTLLVLDFSGVLSLEAVCFGMPDRLEQALRHSGLWELGVDGARYWNDVVKPTWEIGSTTRTPYAYLVAQRVHPPHVAFDDALRRAEQFVQAYMQASVIDPVWRALFDALQSANSVAPLIATDHYAEATAHIAQQIAAMGWRAAALQTDASGRVLIDGSASASLPPHTVALANSADLGAHKEGALFWSRVRAGLAIEPDQILVIDDFGANEHLLDFYADPAKVTRRQAQTLAAISSAFGAPTRTLPFIIERPFPDLETLRATYRAQAEQTIRRVMETIQA
>NC_009523.1|WP_011955790.1|1266844_1267501_-|thiaminase-II
MRFTETLWSSITDIYQAIIRHPFNEELAQGTLPREKFAFYMQQDALYLSDFARALATMAGRAPDEEALLQFVRFAEGVAVVERALHTSYFHEFGIETPTRQQSPSCFAYTNFLLATTACRSYQEGMAALLPCFWIYREVGHDIYKRAAPNNPYQKWIDTYAGQEFGEWVDRAIALTDRIADHASETQKERMRAAFVSSSRLEWMFWDSAYRLEAWLPS
>NC_009523.1|WP_011955791.1|1267799_1268594_-|DUF4058-family-protein
MEPPFPGMDPYLERSSLWPDVHIGLITAIRDYLQARIAPGYIAQITPYVALEQIEIAAPRRALVPDVGVYERDPAAVAVLPAAVDAPSLTGAALLDIPTRYARVELRAVADETLVTAIELLSPANKRPTPDGADAYEQKRQDLFRSGVHLLEIDLLRGGRRPRLARPDPLPPAPYFVFLSRAERWPAVDIWVCPLDRPLPTVPVPLRRPDPDTPLPLTQLLHQVYRNARYDLRIDYRQPPPPPDLTPDEAAWLDAHLRARGLRP
>NC_009523.1|WP_011955792.1|1268663_1269458_-|DUF4058-family-protein
MEPPFPGMDPYLERSSLWPDVHHRIISAICDYLQARIAPGYIAQIAPYVALEQIEIAAPRRALVPDVGVYERDPAAVAVLPAAIDAPSLTGAALLDIPTRYARVEIRAVADETLVTAIELLSPANKRPTPDGADAYEQKRQDLFRSGVHLLEIDLLRGGRRPRLARPDPLPPAPYFVFLSRAERWPAVDIWVCPLDRPLPTVPVPLRRPDPDTPLPLTQLLHQVYRNARYDLRIDYRQPPPPPDLTPDEAAWLDAHLRACGLRP

Crispr_ID: NC_009523_20

• CRISPR_ID: NC_009523_20
• CRISPR_location: 1294449-1294598
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_20

Consensus_repeat	Method
TAGCCGATAACCCATAGCCGATGGTCGAGAGGGTCGCCGTTGGAGTTCGCGTTCC	CRISPRCasFinder

spacers of NC_009523_20

>20.1|1294504|40|NC_009523|CRISPRCasFinder
GCGCAGGCGGGCTTCGCACCACATAGCCGAGGGGTTATCG

CRISPR arrays and Neighbor proteins around NC_009523_20

CRISPR arrays

The CRISPR arrays of NC_009523_20

>merge|NC_009523|20|1294449-1294598|CRISPRCasFinder
TAGCCGATAACCCATAGCCGATGGTCGAGAGGGTCGCCGTTGGAGTTCGCGTTCCGCGCAGGCGGGCTTCGCACCACATAGCCGAGGGGTTATCGTAGCCGATAACCGATAGCCGATGGTCGAGAGGGTCGCCGTTGGAGTTCGCGTTCC

>NC_009523|20|17|1294449-1294598|CRISPRCasFinder
TAGCCGATAACCCATAGCCGATGGTCGAGAGGGTCGCCGTTGGAGTTCGCGTTCC	GCGCAGGCGGGCTTCGCACCACATAGCCGAGGGGTTATCG
TAGCCGATAACCGATAGCCGATGGTCGAGAGGGTCGCCGTTGGAGTTCGCGTTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955823.1|1299274_1300786_+|pyruvate-carboxyltransferase	unknown	unknown	gnl|CDD|163685
NC_009523.1|WP_011955813.1|1289083_1289446_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955824.1|1300782_1301586_+|[LysW]-aminoadipate-kinase	unknown	unknown	gnl|CDD|237599
NC_009523.1|WP_041334829.1|1292613_1293219_+|LysE-family-transporter	unknown	unknown	gnl|CDD|280058
NC_009523.1|WP_011955815.1|1291294_1292560_+|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl|CDD|234748
NC_009523.1|WP_011955808.1|1284412_1285840_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955814.1|1290421_1290979_-|peptide-deformylase	unknown	unknown	gnl|CDD|234668
NC_009523.1|WP_011955821.1|1296688_1297537_+|lysine-biosynthesis-protein-LysX	unknown	unknown	gnl|CDD|273994
NC_009523.1|WP_011955820.1|1296517_1296685_+|lysine-biosynthesis-protein-LysW	unknown	unknown	gnl|CDD|260118
NC_009523.1|WP_011955809.1|1285876_1287211_-|glutamine-synthetase	unknown	unknown	gnl|CDD|223252
NC_009523.1|WP_011955811.1|1287648_1287846_-|hypothetical-protein	unknown	unknown	gnl|CDD|260118
NC_009523.1|WP_011955818.1|1294915_1295416_+|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl|CDD|184460
NC_009523.1|WP_011955810.1|1287207_1287645_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040978.1|1303581_1303719_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955812.1|1287862_1288843_-|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl|CDD|236686
NC_009523.1|WP_011955825.1|1301582_1302806_+|MFS-transporter	unknown	unknown	gnl|CDD|340949
NC_009523.1|WP_011955817.1|1293232_1294375_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|236104
NC_009523.1|WP_011955819.1|1295412_1296501_+|isocitrate/isopropylmalate-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|223549
NC_009523.1|WP_157040978.1|1303841_1303979_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955822.1|1297554_1298601_+|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl|CDD|234761

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955824.1|1300782_1301586_+|[LysW]-aminoadipate-kinase	gnl|CDD|237599	PRK14058, PRK14058, [LysW]-aminoadipate/[LysW]-glutamate kinase.	1.11242e-146
NC_009523.1|WP_011955811.1|1287648_1287846_-|hypothetical-protein	gnl|CDD|260118	cd13946, LysW, Lysine biosynthesis protein LysW. LysW functions as a carrier protein in the biosynthesis pathway of lysine. The C-terminal glutamate sidechain of LysW attaches to the amino group of alpha-aminoadipate (AAA); this peptide bond formation is catalyzed by the ligase LysX. AAA remains associated with LysW throughout its biosynthetic conversion to lysine. LysW also acts to protect the amino group of glutamate in arginine biosynthesis.	0.00529566
NC_009523.1|WP_041334829.1|1292613_1293219_+|LysE-family-transporter	gnl|CDD|280058	pfam01810, LysE, LysE type translocator. This family consists of various hypothetical proteins and an l-lysine exporter LysE from Corynebacterium glutamicum which is proposed to be the first of a novel family of translocators. LysE exports l-lysine from the cell into the surrounding medium and is predicted to span the membrane six times. The physiological function of the exporter is to excrete excess l-Lysine as a result of natural flux imbalances or peptide hydrolysis; and also after artificial deregulation of l-Lysine biosynthesis as used by the biotechnology. industry for the production of l-lysine.	1.77424e-11
NC_009523.1|WP_011955815.1|1291294_1292560_+|3-isopropylmalate-dehydratase-large-subunit	gnl|CDD|234748	PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed.	0
NC_009523.1|WP_011955814.1|1290421_1290979_-|peptide-deformylase	gnl|CDD|234668	PRK00150, def, peptide deformylase; Reviewed.	9.19888e-67
NC_009523.1|WP_011955820.1|1296517_1296685_+|lysine-biosynthesis-protein-LysW	gnl|CDD|260118	cd13946, LysW, Lysine biosynthesis protein LysW. LysW functions as a carrier protein in the biosynthesis pathway of lysine. The C-terminal glutamate sidechain of LysW attaches to the amino group of alpha-aminoadipate (AAA); this peptide bond formation is catalyzed by the ligase LysX. AAA remains associated with LysW throughout its biosynthetic conversion to lysine. LysW also acts to protect the amino group of glutamate in arginine biosynthesis.	2.63276e-16
NC_009523.1|WP_011955821.1|1296688_1297537_+|lysine-biosynthesis-protein-LysX	gnl|CDD|273994	TIGR02144, lysine_biosynthesis_enzyme, Lysine biosynthesis enzyme LysX. The family of proteins found in this equivalog include the characterized LysX from Thermus thermophilus, which is part of a well-organized lysine biosynthesis gene cluster. LysX is believed to carry out an ATP-dependent acylation of the amino group of alpha-aminoadipate in the prokaryotic version of the fungal AAA lysine biosynthesis pathway. No species having a sequence in this equivalog contains the elements of the more common diaminopimelate lysine biosythesis pathway, and none has been shown to be a lysine auxotroph. These sequences have mainly recieved the name of the related enzyme, "ribosomal protein S6 modification protein RimK". RimK has been characterized in E. coli, and acts by ATP-dependent condensation of S6 with glutamate residues.	4.2774e-112
NC_009523.1|WP_011955823.1|1299274_1300786_+|pyruvate-carboxyltransferase	gnl|CDD|163685	cd07948, DRE_TIM_HCS, Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain. Homocitrate synthase (HCS) catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, the first step in the lysine biosynthesis pathway. This family includes the Yarrowia lipolytica LYS1 protein as well as the Saccharomyces cerevisiae LYS20 and LYS21 proteins. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	3.99394e-27
NC_009523.1|WP_011955818.1|1294915_1295416_+|3-isopropylmalate-dehydratase-small-subunit	gnl|CDD|184460	PRK14023, PRK14023, homoaconitate hydratase small subunit; Provisional.	1.80264e-103
NC_009523.1|WP_011955809.1|1285876_1287211_-|glutamine-synthetase	gnl|CDD|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.91927e-178
NC_009523.1|WP_011955812.1|1287862_1288843_-|signal-recognition-particle-docking-protein-FtsY	gnl|CDD|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	2.10001e-159
NC_009523.1|WP_011955825.1|1301582_1302806_+|MFS-transporter	gnl|CDD|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.98644e-117
NC_009523.1|WP_011955817.1|1293232_1294375_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|236104	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional.	1.39932e-177
NC_009523.1|WP_011955819.1|1295412_1296501_+|isocitrate/isopropylmalate-dehydrogenase-family-protein	gnl|CDD|223549	COG0473, LeuB, Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism].	1.11872e-148
NC_009523.1|WP_011955822.1|1297554_1298601_+|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl|CDD|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	7.41655e-163

Protein sequences

>NC_009523.1|WP_011955817.1|1293232_1294375_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MHLETISIHAGQEIDPTTGSVIPPIYLTTTFERAPDGSFPHGYIYTRNGNPNRAMLETCLATLEGGATCVAFSSGLAAAMSIFQALRPGDHVVAPDDAYHGVTRLLRDIMAPWGLEYTRVDMRDPQNVAAALRPNTRLVWIETPSNPLLKIADIAAIASIAHQAGALCAVDNTWATPVQQRPLELGADMVMHATTKYIGGHSDVLGGVVVFRENDAFAERVRFLQINGGAVPSPFDCWLTLRGIQTLTYRVRAHAASAMRVARFLATHPRIERVHYPGLETHPGHAVAARQMRGFGGMISIEVQGGEAAAMAVAARVRIITRATSLGGVESLIEHRASVEGPESVTPPNLLRISVGLEHPDDLIADLAQALEVDDVSPQR
>NC_009523.1|WP_041334829.1|1292613_1293219_+|LysE-family-transporter
MLIGLSIAAPVGPVSLLCIRRTLADGFAAGLASGMGAATADAVYGIVAGFGLTFVTVLLTGGEFWLRLIGGLYLFATGVATFLARPTGHATSVNRRHLSGAWASTFVLTLTNPATILAFAAMFGGVGLTYQAHASDPAVIVVVLVSGIFTGSAIWWMLLCMSVSRLRTRLDQRATVWINRVSGVAIAAIGALAIGSLSGSG
>NC_009523.1|WP_011955815.1|1291294_1292560_+|3-isopropylmalate-dehydratase-large-subunit
MGQTLAEQILSHAAGRPVSAGENIVARIDLAMMHDSISPSIIKILHHELGAERVWDRDRVAVVVDHVAPAATIQNAEHQLALRRWVRQQQITHFFDVGRGISHPVLVEEGLARPGMLIIGSDSHSTAYGAVGAFGAGMGSTDMALALATGQTWLRVPETVRILARGRFQPGVGAKDLGLRVARLIGADGATYQSVEWHGVEELSIGERMTLATLSVEIGAKAGIIPPVGPGWEEHATRRGITVPSWLRVEEGARYSRTVEVDLDTLEPQVSVPHFVDNVRDLSDLGRVEVDVVYIGTCTNGHANDLAAAARILKGRKVARGVRLLVVPASSEALQQATADGTLATLLESGAAIGTPGCGACIGRHMGVLAPGEVCLFTGNRNFRGRMGSPEAQIYLASPEVAAATAVLGYIAHPAEVVNGR
>NC_009523.1|WP_011955814.1|1290421_1290979_-|peptide-deformylase
MALRRILRIDNPDDKKILTTRCHPVRLPNPALKQLVADMFETMHAASGVGLAAPQIGITQRLAVISIPPVVEERPDGSKVEVAPEQNFVLINPEIIKASDQEDVGLEGCLSLPGWYGEVPRAAWVTVEYTDLNGRRQRIRRATGLLGRALQHEIDHLDGILFTERIRDLSTLKDYSEEMAPTAAE
>NC_009523.1|WP_011955813.1|1289083_1289446_+|hypothetical-protein
MLRTIKRRGVALIAGLGLALSIAACASQAKVQDQPLLNQLMAPNGFVIQQPAQSPAQLNQTDANTAPLFDRVEQAPAAPASDAQETFDRTEKAPAAAPASESQRAMETKQDAAMYMGCGK
>NC_009523.1|WP_011955812.1|1287862_1288843_-|signal-recognition-particle-docking-protein-FtsY
MGFFKRMFGRGQDAPRTEEEARQEEQKIDQATAKARRGLFGQIASLFATDDPITDDLWDDLEALLIQADVGVETTMYLVNRTKDRCNRYGVKRAREARDMLKAEMVRVLQEQERQPQIDARPYIILVVGVNGAGKTTLIAKLAYRLKNQFGRRVLLAAGDTFRAAATEQLETWAERVGVPVISRGQGADPGAVVYDAIEAVSNGDVDVLIIDTAGRLHAKTNLMLELQKLRNIIRRRFPDAPHEVLLVIDATTGQNGVLQAKSFLKAVDVTHVAVTKLDGTAKGGIAFAIAQDIERPIRYIGTGEKMTDLALFDAETFVESLFAQD
>NC_009523.1|WP_011955811.1|1287648_1287846_-|hypothetical-protein
MPLEVTTCPVCGRKLALQEYVTPGTRLVCTDCESNLYVEARRPVRLKLVPEEATYNADDRPESYG
>NC_009523.1|WP_011955810.1|1287207_1287645_-|hypothetical-protein
MQPFLCRKRRYLALIGAAVILFFLQACMLASGERTSTDVRPDAGNVTRTFLGAEGSEVYTVPLGDGGALLQVIAILELQQGEMRLELLNAGGSVAFAVQSRPGDQVSRSGMVRLDENGVLRYRVVARGARDGGYQILYQRVQKNQ
>NC_009523.1|WP_011955809.1|1285876_1287211_-|glutamine-synthetase
MTVSPETILKQAAGRQVEFVSLQYTDIVGMVKNVTIPASELPDCLDHGVWFDGSSLEGFARVAESDMYLVPDLDTFAIVPWDEAAGFVTARMICDVHTPEGKPFAGDPRYALRRALDAAQRVGMTFLVGPEVEFFLFRSGPDGRPALIPHDVAGYFDATTDAATHIRRRMVRALQAFGIEVEATHHEGALGQHEIDLRHTHGLRAADNLVTTRATLKAIAQQQNLYATFMPKPIAHLNGNGLHMHLSLVDAASGHNLFFDAHDPYCISKLARHFIAGLLAHARGMIAILAPLVNSYKRLVPGFEAPVYLIWGRTNRAQLVRVPRISTARPQSARVELRCADPSCNPYLALAVILAAGLDGIRRELPLPPPVEEDLFEVDLRARQFEVLPSTLGAALEELQRDEVITEALGPHILERFIEARAREWEEYSHAISQWELDRYLPVY
>NC_009523.1|WP_011955808.1|1284412_1285840_-|hypothetical-protein
MAQAARPQPEQVYYQRVAWTWLLVFFALFCVLVAVAGYAGWQYYATAMNPVEGAVLRSHVNAGVSIQPRGRLVAESIERLPPERDPCPGELDICATVAEGSVIRTKTEAGYGPVASLVLADRTQIDFWAHPAGAELALVSYRATAWHNGRLEALMRQNAGYLRYDIAAGQPYDQVDYVVDVGGGTRIRLMPGGSYSISVLTDASRAVSAPAVTGEPIRVEVATRAGSAIIEHRENTVEVQPGQLVQIDAAGALLGPGEARWELIRDGGFEQYADQNRYDQTSKTWRKYALPNAPGMAPEEHNGRFTVVRSCRPETPDFCTPDDQVLIGQFRRDGLQTRPFTVGIEQTIDADVSEFPSLRLSMWVRVLTQTVQLAGVAGSECPVMVRITYKPTSPTDQEASRYFCIYTGSGEVSNSEDAGEIRYRQVPQFQWYRLNVELRDDALLRQARYIQSIRIEARGHDYLSEVTGISLIGRQ
>NC_009523.1|WP_011955818.1|1294915_1295416_+|3-isopropylmalate-dehydratase-small-subunit
MARIWRFGANVNTDQIVPGRYAPYMLKSEEELRNYPFIEARPEFASTVRPGDLIIAGPNFGCGSSREYAPLALKMVGIGAIIAPLFARIFYRNALNLGIPLFEADLTGQLEDGQEVEFNVETGVIIADGRTIQLPPPPEWMREVWREGGIVPFYRKYRRFPGAVTV
>NC_009523.1|WP_011955819.1|1295412_1296501_+|isocitrate/isopropylmalate-dehydrogenase-family-protein
MSAAPYTILVIPGDGIGREVIPAAVAVLRATGLPFHFENADAGWECFQRQGEALPSATLTAARAADAILFGAVASPGYPVAGYRSPIVRLRRELDLYANIRPVFDDLPENGSNPRRRKVDLVVVRENTEDVYAGRERVEDDGATAIAERVITRRASARIMRVACDLARARRSARNGSDAPPGRVTVVHKANVLRETCGLFRSVALEVAQAYPDLQIDEMLVDTCALQLATRPERFDVIVTTNLFGDILSDVACAWGGGLGLAPSANLGERHALFEPVHGAAPDIAGKGIANPLAAIGCTALLLDHLAGRAPADLASAMRGWSARIQRAIRHVRAAGPHTPDLGGSAVTTDITNAVLSHMLTT
>NC_009523.1|WP_011955820.1|1296517_1296685_+|lysine-biosynthesis-protein-LysW
MRATCPECEAEITLPEGTVEGEILTCPECAAELEVVSIDPPELALAPEVEEDWGE
>NC_009523.1|WP_011955821.1|1296688_1297537_+|lysine-biosynthesis-protein-LysX
MRVGVLCSRIRVEEKLLFAELERRGIAYERIDDDDVIFDLNEGRYEYDVVLERSIHHSRALYALKVFNDAGVPTVNTAYVADICGDKFKTTQALIRAGVPTPRTRMAFTPESALRAIEDLGYPVVLKPAIGSWGRLIAKVNDREAAEALLEHKQILGSYHHSIFYIQEYIPKPHRRDIRAFVVGDECICAIYRTSEHWITNTARGGIASVCPVTPALADLCVSAAYAVGGGVVAIDVLEASDGRLLVNEVNYTMEFRNSIAPTGVDIPARIIDYTLAAAKKG
>NC_009523.1|WP_011955822.1|1297554_1298601_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MSVRVSIVGGSGYVGGELLRLLLFHPLVTVAQATSERLAGKPITVAHPNLRGIPAAREVQFTSQDRLTPCDVLFLALPHGDAARAIDRFAELAPKIIDCSADFRLRDPALYARWYGETHPAPHWLEQFVYGLPELHRDAIRTARYVSGVGCNATATNLALLPLVRVGLIDPTRDVIVEVKVGSSEGGAQPGESSHHPERSGAVRSFAPVGHRHTAEVVQELGLSRVHLSITSVELVRGALATAHAFASAPVSEKDLWRAFRATYGSEPFVRIVREKQGVYRLPEPKILAGSNYADVGFAVDEETGRIVSICAIDNLMKGAAGTAVQCMNLMCGFEERTGLEFPGLHPI
>NC_009523.1|WP_011955823.1|1299274_1300786_+|pyruvate-carboxyltransferase
MDMSPIPEFLRSENPAQPRYHEAVELFALFDYLKAMRWGVFSIRESLQAVGECRDGTLQGFHLTVDEAWEAVRGMDSLGVGVIELPAFPANPPGQAFNRRLLERAEAHRLTTTFAAHARCVATDIRTAAETGFRRLHLYIGVSPIKQATVRANATQLADRAFDAIHLARELGFDCVRISTEDAYRTPLDDYRAFYERLQDRLIRHNLHVDGIGIPDTVGVGTIDDLGDRIAILQHIGIRFAFLECHIHNDIGHADRLYVDTLILCMRLGIMMLPDFSILGIGERNGTIGLSSLIEAIYRRLLLLYPRSMPAIRQAVREKLGVLPDGELFVNRYRDLDSFFYRILARSGFVFDRSPFSSNTEYDGSGVHADTTLRAFRLALENGYEGQRAIDLGNSAYAGALPPYDMPLRTPVLACFGCGKSNVRFWREREHLVLRHPDDIRLRIAPYADDLAEESLHIPTDEATADELAARLIRCASVREGGINHHQAMEIVRLFYRPKEACA
>NC_009523.1|WP_011955824.1|1300782_1301586_+|[LysW]-aminoadipate-kinase
MIVVKVGGGASIAYDPLCDDLATLTRAGQRFVLVHGGSHETNTLAERLGHPPRFVTSPSGYTSRYTDRVTLELFLMATAGKVNKLIVERLQHMGVNAIGLSGLDGRILQGQRKAVIRIIEDGKQKVLRDDWTGTVEQVNTDLLRLLLDAGLLPVIAPIAVSTIGEALNVDGDRAAAAIAAALGADTLVLLTNVPGLLRAFPDERTLVRHIPRADVEAYLPLAQGRMKKKILGASEALNQGVGRVILGDARVSEPVSRALAGEGTVIA
>NC_009523.1|WP_011955825.1|1301582_1302806_+|MFS-transporter
MTRWQQTLFILVAAQLVSAVGFGMFFPFLPLYVERLGTNTGFSLEFWAGMVFSGQALTMAISSPIWGSLADRFGRKAMIERAMYGGAVIILLMGFARSAEELALLRAIQGAITGTIAAINALTASLVPRERVGYAMGMLQVGLWAGIAAGPMLGGVVADLLGFRAAFIVTAILLIISGIVVTFGVQERFTPPSQGTRRTGIMSDWRRILVLPGVAAAYTTRFLNWLGPNMLLPVLPLYIATLMHGNEGVSTFTGIIVGLSSAAGTVSALYLGRLGDRIGHRRVLLAGTAVAALGFIPQAFVTTGWQLLMLQALTGAATGGMNPALSALLARYTGSGDEGAVFGIDNSVNSAARAAAPLLGAALAAWFGLPSIFLVTALVLLGAAALTFRCLPERIAVASPATPAVQS
>NC_009523.1|WP_157040978.1|1303581_1303719_+|hypothetical-protein
MTVSRGGTTNLVRQGGSARRLATEVAAGRREARLRGLAGAHPARP
>NC_009523.1|WP_157040978.1|1303841_1303979_+|hypothetical-protein
MTVSRGGTTNLVRQGGSARRLATEVAAGRREARLRGLAGAHPARP

Crispr_ID: NC_009523_21

• CRISPR_ID: NC_009523_21
• CRISPR_location: 1298897-1299043
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_21

Consensus_repeat	Method
GCCGTCGGGCTGAAGCCCTCGGCTATACGGGGCAAAGCCCGCCTGCGCGGGCT	CRISPRCasFinder

spacers of NC_009523_21

>21.1|1298950|41|NC_009523|CRISPRCasFinder
GACGCATGCCGTCGGGCTGATGGAGCCGGTATTCGCCCTTT

CRISPR arrays and Neighbor proteins around NC_009523_21

CRISPR arrays

The CRISPR arrays of NC_009523_21

>merge|NC_009523|21|1298897-1299043|CRISPRCasFinder
GCCGTCGGGCTGAAGCCCTCGGCTATACGGGGCAAAGCCCGCCTGCGCGGGCTGACGCATGCCGTCGGGCTGATGGAGCCGGTATTCGCCCTTTGCCGTCGGGCTGAAGCCCTCGGCTATACGGGGCAAAGCCCGCCTGCGCGGGCT

>NC_009523|21|18|1298897-1299043|CRISPRCasFinder
GCCGTCGGGCTGAAGCCCTCGGCTATACGGGGCAAAGCCCGCCTGCGCGGGCT	GACGCATGCCGTCGGGCTGATGGAGCCGGTATTCGCCCTTT
GCCGTCGGGCTGAAGCCCTCGGCTATACGGGGCAAAGCCCGCCTGCGCGGGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011955830.1|1311534_1327035_+|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl|CDD|380149
NC_009523.1|WP_011955824.1|1300782_1301586_+|[LysW]-aminoadipate-kinase	unknown	unknown	gnl|CDD|237599
NC_009523.1|WP_011955827.1|1307768_1309013_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_011955813.1|1289083_1289446_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041334829.1|1292613_1293219_+|LysE-family-transporter	unknown	unknown	gnl|CDD|280058
NC_009523.1|WP_011955815.1|1291294_1292560_+|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl|CDD|234748
NC_009523.1|WP_011955828.1|1309332_1310508_+|MFS-transporter	unknown	unknown	gnl|CDD|341031
NC_009523.1|WP_011955814.1|1290421_1290979_-|peptide-deformylase	unknown	unknown	gnl|CDD|234668
NC_009523.1|WP_041333096.1|1310710_1311094_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955820.1|1296517_1296685_+|lysine-biosynthesis-protein-LysW	unknown	unknown	gnl|CDD|260118
NC_009523.1|WP_011955821.1|1296688_1297537_+|lysine-biosynthesis-protein-LysX	unknown	unknown	gnl|CDD|273994
NC_009523.1|WP_011955826.1|1304915_1307588_+|pyruvate,-phosphate-dikinase	unknown	unknown	gnl|CDD|236446
NC_009523.1|WP_011955818.1|1294915_1295416_+|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl|CDD|184460
NC_009523.1|WP_011955823.1|1299274_1300786_+|pyruvate-carboxyltransferase	unknown	unknown	gnl|CDD|163685
NC_009523.1|WP_157040978.1|1303581_1303719_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955819.1|1295412_1296501_+|isocitrate/isopropylmalate-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|223549
NC_009523.1|WP_011955825.1|1301582_1302806_+|MFS-transporter	unknown	unknown	gnl|CDD|340949
NC_009523.1|WP_011955817.1|1293232_1294375_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|236104
NC_009523.1|WP_157040978.1|1303841_1303979_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955822.1|1297554_1298601_+|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl|CDD|234761

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955830.1|1311534_1327035_+|isopeptide-forming-domain-containing-fimbrial-protein	gnl|CDD|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	4.67169e-51
NC_009523.1|WP_011955824.1|1300782_1301586_+|[LysW]-aminoadipate-kinase	gnl|CDD|237599	PRK14058, PRK14058, [LysW]-aminoadipate/[LysW]-glutamate kinase.	1.11242e-146
NC_009523.1|WP_041334829.1|1292613_1293219_+|LysE-family-transporter	gnl|CDD|280058	pfam01810, LysE, LysE type translocator. This family consists of various hypothetical proteins and an l-lysine exporter LysE from Corynebacterium glutamicum which is proposed to be the first of a novel family of translocators. LysE exports l-lysine from the cell into the surrounding medium and is predicted to span the membrane six times. The physiological function of the exporter is to excrete excess l-Lysine as a result of natural flux imbalances or peptide hydrolysis; and also after artificial deregulation of l-Lysine biosynthesis as used by the biotechnology. industry for the production of l-lysine.	1.77424e-11
NC_009523.1|WP_011955815.1|1291294_1292560_+|3-isopropylmalate-dehydratase-large-subunit	gnl|CDD|234748	PRK00402, PRK00402, 3-isopropylmalate dehydratase large subunit; Reviewed.	0
NC_009523.1|WP_011955828.1|1309332_1310508_+|MFS-transporter	gnl|CDD|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.12339e-58
NC_009523.1|WP_011955814.1|1290421_1290979_-|peptide-deformylase	gnl|CDD|234668	PRK00150, def, peptide deformylase; Reviewed.	9.19888e-67
NC_009523.1|WP_011955820.1|1296517_1296685_+|lysine-biosynthesis-protein-LysW	gnl|CDD|260118	cd13946, LysW, Lysine biosynthesis protein LysW. LysW functions as a carrier protein in the biosynthesis pathway of lysine. The C-terminal glutamate sidechain of LysW attaches to the amino group of alpha-aminoadipate (AAA); this peptide bond formation is catalyzed by the ligase LysX. AAA remains associated with LysW throughout its biosynthetic conversion to lysine. LysW also acts to protect the amino group of glutamate in arginine biosynthesis.	2.63276e-16
NC_009523.1|WP_011955821.1|1296688_1297537_+|lysine-biosynthesis-protein-LysX	gnl|CDD|273994	TIGR02144, lysine_biosynthesis_enzyme, Lysine biosynthesis enzyme LysX. The family of proteins found in this equivalog include the characterized LysX from Thermus thermophilus, which is part of a well-organized lysine biosynthesis gene cluster. LysX is believed to carry out an ATP-dependent acylation of the amino group of alpha-aminoadipate in the prokaryotic version of the fungal AAA lysine biosynthesis pathway. No species having a sequence in this equivalog contains the elements of the more common diaminopimelate lysine biosythesis pathway, and none has been shown to be a lysine auxotroph. These sequences have mainly recieved the name of the related enzyme, "ribosomal protein S6 modification protein RimK". RimK has been characterized in E. coli, and acts by ATP-dependent condensation of S6 with glutamate residues.	4.2774e-112
NC_009523.1|WP_011955826.1|1304915_1307588_+|pyruvate,-phosphate-dikinase	gnl|CDD|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0
NC_009523.1|WP_011955818.1|1294915_1295416_+|3-isopropylmalate-dehydratase-small-subunit	gnl|CDD|184460	PRK14023, PRK14023, homoaconitate hydratase small subunit; Provisional.	1.80264e-103
NC_009523.1|WP_011955823.1|1299274_1300786_+|pyruvate-carboxyltransferase	gnl|CDD|163685	cd07948, DRE_TIM_HCS, Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain. Homocitrate synthase (HCS) catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, the first step in the lysine biosynthesis pathway. This family includes the Yarrowia lipolytica LYS1 protein as well as the Saccharomyces cerevisiae LYS20 and LYS21 proteins. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	3.99394e-27
NC_009523.1|WP_011955819.1|1295412_1296501_+|isocitrate/isopropylmalate-dehydrogenase-family-protein	gnl|CDD|223549	COG0473, LeuB, Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism].	1.11872e-148
NC_009523.1|WP_011955825.1|1301582_1302806_+|MFS-transporter	gnl|CDD|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.98644e-117
NC_009523.1|WP_011955817.1|1293232_1294375_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|236104	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional.	1.39932e-177
NC_009523.1|WP_011955827.1|1307768_1309013_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	4.57661e-84
NC_009523.1|WP_011955822.1|1297554_1298601_+|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl|CDD|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	7.41655e-163

Protein sequences

>NC_009523.1|WP_011955822.1|1297554_1298601_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MSVRVSIVGGSGYVGGELLRLLLFHPLVTVAQATSERLAGKPITVAHPNLRGIPAAREVQFTSQDRLTPCDVLFLALPHGDAARAIDRFAELAPKIIDCSADFRLRDPALYARWYGETHPAPHWLEQFVYGLPELHRDAIRTARYVSGVGCNATATNLALLPLVRVGLIDPTRDVIVEVKVGSSEGGAQPGESSHHPERSGAVRSFAPVGHRHTAEVVQELGLSRVHLSITSVELVRGALATAHAFASAPVSEKDLWRAFRATYGSEPFVRIVREKQGVYRLPEPKILAGSNYADVGFAVDEETGRIVSICAIDNLMKGAAGTAVQCMNLMCGFEERTGLEFPGLHPI
>NC_009523.1|WP_011955821.1|1296688_1297537_+|lysine-biosynthesis-protein-LysX
MRVGVLCSRIRVEEKLLFAELERRGIAYERIDDDDVIFDLNEGRYEYDVVLERSIHHSRALYALKVFNDAGVPTVNTAYVADICGDKFKTTQALIRAGVPTPRTRMAFTPESALRAIEDLGYPVVLKPAIGSWGRLIAKVNDREAAEALLEHKQILGSYHHSIFYIQEYIPKPHRRDIRAFVVGDECICAIYRTSEHWITNTARGGIASVCPVTPALADLCVSAAYAVGGGVVAIDVLEASDGRLLVNEVNYTMEFRNSIAPTGVDIPARIIDYTLAAAKKG
>NC_009523.1|WP_011955820.1|1296517_1296685_+|lysine-biosynthesis-protein-LysW
MRATCPECEAEITLPEGTVEGEILTCPECAAELEVVSIDPPELALAPEVEEDWGE
>NC_009523.1|WP_011955819.1|1295412_1296501_+|isocitrate/isopropylmalate-dehydrogenase-family-protein
MSAAPYTILVIPGDGIGREVIPAAVAVLRATGLPFHFENADAGWECFQRQGEALPSATLTAARAADAILFGAVASPGYPVAGYRSPIVRLRRELDLYANIRPVFDDLPENGSNPRRRKVDLVVVRENTEDVYAGRERVEDDGATAIAERVITRRASARIMRVACDLARARRSARNGSDAPPGRVTVVHKANVLRETCGLFRSVALEVAQAYPDLQIDEMLVDTCALQLATRPERFDVIVTTNLFGDILSDVACAWGGGLGLAPSANLGERHALFEPVHGAAPDIAGKGIANPLAAIGCTALLLDHLAGRAPADLASAMRGWSARIQRAIRHVRAAGPHTPDLGGSAVTTDITNAVLSHMLTT
>NC_009523.1|WP_011955818.1|1294915_1295416_+|3-isopropylmalate-dehydratase-small-subunit
MARIWRFGANVNTDQIVPGRYAPYMLKSEEELRNYPFIEARPEFASTVRPGDLIIAGPNFGCGSSREYAPLALKMVGIGAIIAPLFARIFYRNALNLGIPLFEADLTGQLEDGQEVEFNVETGVIIADGRTIQLPPPPEWMREVWREGGIVPFYRKYRRFPGAVTV
>NC_009523.1|WP_011955817.1|1293232_1294375_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MHLETISIHAGQEIDPTTGSVIPPIYLTTTFERAPDGSFPHGYIYTRNGNPNRAMLETCLATLEGGATCVAFSSGLAAAMSIFQALRPGDHVVAPDDAYHGVTRLLRDIMAPWGLEYTRVDMRDPQNVAAALRPNTRLVWIETPSNPLLKIADIAAIASIAHQAGALCAVDNTWATPVQQRPLELGADMVMHATTKYIGGHSDVLGGVVVFRENDAFAERVRFLQINGGAVPSPFDCWLTLRGIQTLTYRVRAHAASAMRVARFLATHPRIERVHYPGLETHPGHAVAARQMRGFGGMISIEVQGGEAAAMAVAARVRIITRATSLGGVESLIEHRASVEGPESVTPPNLLRISVGLEHPDDLIADLAQALEVDDVSPQR
>NC_009523.1|WP_041334829.1|1292613_1293219_+|LysE-family-transporter
MLIGLSIAAPVGPVSLLCIRRTLADGFAAGLASGMGAATADAVYGIVAGFGLTFVTVLLTGGEFWLRLIGGLYLFATGVATFLARPTGHATSVNRRHLSGAWASTFVLTLTNPATILAFAAMFGGVGLTYQAHASDPAVIVVVLVSGIFTGSAIWWMLLCMSVSRLRTRLDQRATVWINRVSGVAIAAIGALAIGSLSGSG
>NC_009523.1|WP_011955815.1|1291294_1292560_+|3-isopropylmalate-dehydratase-large-subunit
MGQTLAEQILSHAAGRPVSAGENIVARIDLAMMHDSISPSIIKILHHELGAERVWDRDRVAVVVDHVAPAATIQNAEHQLALRRWVRQQQITHFFDVGRGISHPVLVEEGLARPGMLIIGSDSHSTAYGAVGAFGAGMGSTDMALALATGQTWLRVPETVRILARGRFQPGVGAKDLGLRVARLIGADGATYQSVEWHGVEELSIGERMTLATLSVEIGAKAGIIPPVGPGWEEHATRRGITVPSWLRVEEGARYSRTVEVDLDTLEPQVSVPHFVDNVRDLSDLGRVEVDVVYIGTCTNGHANDLAAAARILKGRKVARGVRLLVVPASSEALQQATADGTLATLLESGAAIGTPGCGACIGRHMGVLAPGEVCLFTGNRNFRGRMGSPEAQIYLASPEVAAATAVLGYIAHPAEVVNGR
>NC_009523.1|WP_011955814.1|1290421_1290979_-|peptide-deformylase
MALRRILRIDNPDDKKILTTRCHPVRLPNPALKQLVADMFETMHAASGVGLAAPQIGITQRLAVISIPPVVEERPDGSKVEVAPEQNFVLINPEIIKASDQEDVGLEGCLSLPGWYGEVPRAAWVTVEYTDLNGRRQRIRRATGLLGRALQHEIDHLDGILFTERIRDLSTLKDYSEEMAPTAAE
>NC_009523.1|WP_011955813.1|1289083_1289446_+|hypothetical-protein
MLRTIKRRGVALIAGLGLALSIAACASQAKVQDQPLLNQLMAPNGFVIQQPAQSPAQLNQTDANTAPLFDRVEQAPAAPASDAQETFDRTEKAPAAAPASESQRAMETKQDAAMYMGCGK
>NC_009523.1|WP_011955823.1|1299274_1300786_+|pyruvate-carboxyltransferase
MDMSPIPEFLRSENPAQPRYHEAVELFALFDYLKAMRWGVFSIRESLQAVGECRDGTLQGFHLTVDEAWEAVRGMDSLGVGVIELPAFPANPPGQAFNRRLLERAEAHRLTTTFAAHARCVATDIRTAAETGFRRLHLYIGVSPIKQATVRANATQLADRAFDAIHLARELGFDCVRISTEDAYRTPLDDYRAFYERLQDRLIRHNLHVDGIGIPDTVGVGTIDDLGDRIAILQHIGIRFAFLECHIHNDIGHADRLYVDTLILCMRLGIMMLPDFSILGIGERNGTIGLSSLIEAIYRRLLLLYPRSMPAIRQAVREKLGVLPDGELFVNRYRDLDSFFYRILARSGFVFDRSPFSSNTEYDGSGVHADTTLRAFRLALENGYEGQRAIDLGNSAYAGALPPYDMPLRTPVLACFGCGKSNVRFWREREHLVLRHPDDIRLRIAPYADDLAEESLHIPTDEATADELAARLIRCASVREGGINHHQAMEIVRLFYRPKEACA
>NC_009523.1|WP_011955824.1|1300782_1301586_+|[LysW]-aminoadipate-kinase
MIVVKVGGGASIAYDPLCDDLATLTRAGQRFVLVHGGSHETNTLAERLGHPPRFVTSPSGYTSRYTDRVTLELFLMATAGKVNKLIVERLQHMGVNAIGLSGLDGRILQGQRKAVIRIIEDGKQKVLRDDWTGTVEQVNTDLLRLLLDAGLLPVIAPIAVSTIGEALNVDGDRAAAAIAAALGADTLVLLTNVPGLLRAFPDERTLVRHIPRADVEAYLPLAQGRMKKKILGASEALNQGVGRVILGDARVSEPVSRALAGEGTVIA
>NC_009523.1|WP_011955825.1|1301582_1302806_+|MFS-transporter
MTRWQQTLFILVAAQLVSAVGFGMFFPFLPLYVERLGTNTGFSLEFWAGMVFSGQALTMAISSPIWGSLADRFGRKAMIERAMYGGAVIILLMGFARSAEELALLRAIQGAITGTIAAINALTASLVPRERVGYAMGMLQVGLWAGIAAGPMLGGVVADLLGFRAAFIVTAILLIISGIVVTFGVQERFTPPSQGTRRTGIMSDWRRILVLPGVAAAYTTRFLNWLGPNMLLPVLPLYIATLMHGNEGVSTFTGIIVGLSSAAGTVSALYLGRLGDRIGHRRVLLAGTAVAALGFIPQAFVTTGWQLLMLQALTGAATGGMNPALSALLARYTGSGDEGAVFGIDNSVNSAARAAAPLLGAALAAWFGLPSIFLVTALVLLGAAALTFRCLPERIAVASPATPAVQS
>NC_009523.1|WP_157040978.1|1303581_1303719_+|hypothetical-protein
MTVSRGGTTNLVRQGGSARRLATEVAAGRREARLRGLAGAHPARP
>NC_009523.1|WP_157040978.1|1303841_1303979_+|hypothetical-protein
MTVSRGGTTNLVRQGGSARRLATEVAAGRREARLRGLAGAHPARP
>NC_009523.1|WP_011955826.1|1304915_1307588_+|pyruvate,-phosphate-dikinase
MSKKWVYLFTEGNASMRDLLGGKGAGVAEMTRTGVPVPPGFTITTEACNEYYARGRQFPEGLWEQTLEALKVIEAQVGKKFGDPSNPLLVSVRSGARESMPGMMDTVLNLGLNKETLEGLARLTDNRRFAADAYRRFIQLFGKIVLGVDGEKFEHVMNEAKGKDRQDTDLTADELMQIAETFKAIIKEETGIDFPEDPYEQLRMAITAVFNSWMGRRAVDYRRVYKIPDTLGTGVNVQMMVFGNMGNDSATGVAFTRNPATGEDELYGEYLVNAQGEDVVAGIRTPKPLSKLREEMPEVYQQFSEIAKMLERHYKDVQDVEFTIERGKLWMLQTRNGKRTGMAAVKIAVDMVNEGLIDKRTALRRVQPEMLNQFLFPIVDPRAAEHATRLAHGLAAGPGAAQGRIVLDPDEAAARSEQGERVILVRTETAPEDFHGMVASQAILTARGGLTSHAAVVARQLGKCCVCGCGDLEIDYKAGTVHVHGTDTILKEGDWITVDGHSGWVYAGQVETREAEVIQVIRGQMKPEDSKLYGYFSTFLSWADEVRRLGVRANADTPTDARIARLFGAEGIGLCRTEHMFFEGDRIDAVREMIVADTVEDRRKALAKIEPLQQGDFEGIFEVMDGLPVTIRTLDPPLHEFLPHGDREIEELAHKMGIDFARLKAKVESLREANPMLGFRGCRLGIEYPEITEMQARAIFRAAANCQARGIHVHPEIMIPLVGDVSELRMQGDIVRRVANEVMAETGQKIDYLLGTMIEVPRAALTADKIATVAEFFSFGTNDLTQMTFGMSRDDVGRFLPLYVERKLLKDDPFEVLDQEGVGQLVRMGVERGRSTRPDLKTGICGEHGGEPESVKFCHRVGLNYVSCSPYRVVIARLAAAQAVLEEQKG
>NC_009523.1|WP_011955827.1|1307768_1309013_-|glycosyltransferase-family-4-protein
MRILMLSWEYPPHIIGGLGRHVTDLSDALAQIGVEVHIITPQLKEGSRYERTAQGVHIHRVAVPPITDRMLFPLTQELNVALKHAALDVQRSTGSFDLIHAHDWLVAQAGIALKHLCHLPLLATIHATERGRHQGHLANDLSLQIDRLERLLTGEAHRIIACSHFMAHEVHTTFDAPHDKIDVVPNGVVVRSSPFQSDEERIVFRRRFVRDDQPLVFSVGRIVYEKGLHLLIDAWSHVLAQFPHAHLIIAGTGGYLDTLRQRAQDAGVADHVTFTGRISDEERDRLYHAADAAVFPSLYEPFGIVALEAMAARCPVIVAHTGGLAEVVKLHETGLTVYPNNVDSLVWGITHTLAHPNWSQARALNAFHDVCTRYNWNTIAQTTLDIYRQVCNEWRQVQRNSRMVSTFQFAATYG
>NC_009523.1|WP_011955828.1|1309332_1310508_+|MFS-transporter
MLKNRLLLSISAGHFAVDVLNSVVPVLLATLAVPLALSNAQIGVALTIQIFAGALSQPLFGWLADRFSARPAALAGGGVAWMAICLAAIALSMNWTLIVLLVGFMALGSGLFHPIGTASAAASAPSRAASATAIFFFSGQLGLSLGPLLGGALLTTPDGIRLMLVLAALMLAPAVLLFAAPRPVIPVGGTARAAHAAVRVGVAILAAFIVLVALRSSIQSVFMSFLPKLFADRGWAPVAYGAIAGTFMFTAAIGNIIAGDIADRFGMRAATIWPLLISVPAGLVCIWSPSPLTAFIACGVAGMVIGGQHSVLVVHAQRLLPVRQGFAAGLILGFTFATGGIGTALVGALADTVGLFTAMQATVLLALPAAALALTLPGRESVVSAVAAAEA
>NC_009523.1|WP_041333096.1|1310710_1311094_+|hypothetical-protein
MPGDHCIGASVCHFPPAVDGWFRQSAVAPPMQTRQRLAFLTPGILLSGAPVLHRIASALAYLTPQTTRAARYERWLRRVRNAPRLTRERRSAPLARQILMPYHTRRWVVIIDATTHTEPLRVVTAAR
>NC_009523.1|WP_011955830.1|1311534_1327035_+|isopeptide-forming-domain-containing-fimbrial-protein
MHRRSRLASLFLVLAVTAASLGLLASNAVFAGGNPLPVATVNNATGLIGETVTLTVTFDNASTGTGDQTGYGPYIDLFLDTTGPDGAPSFDGLVTTGMRATYLGQPLPGMEVIPITGPTYVHPLTGQTLSVPGYGTRFQNGDTIVVLTLLFGSFTNTQPPAPIDVSLRISNLADLGTPLPVTAVAGFRYGADPLDNPGADPPIRQTTPSDANVTPTLWTLTKTYLGPEDETATGRNYPRRYRLDVDIAEGQPVTNLQITDVLANSMRITGNTAAQMSAIRYDAPGMPTEVFTPANLSGTATPAAPGGTLIYSFGDKTGVRGIDASFEFEFYIPRDTSAATPTVPQGTDSTFANNTGSSSATWTPIDTRDTSTPITITLPPNAHTLQQHSLATQKSVTPVDRNTLNPTGGAIIPGSTLLRYDIDFQVSDYFAVQNVYLEDIISDGQRLFVRTSGITSTVPTLQVENAYVTGASPTRTTIAAAPFSGTGVITYEQRFTTRGTPLSDPTSPPSGPVFTILTPAPSLSGTTYVRFDISRELIARGVSGRLVGGDIPNAGGAPQNNNPPLFGPTRGRITFYTEVKDEFSDDFPSGDRSVDQLDILRNTVPQIRGEQINTTTINNATPTVIGQATDDTAASVELPIGDRNKTIYALNGQTTNLGDPVTVQPGDLVTYRLTYRLPISSFENVQFIDFPPLPVFPVPDRLFFDASAAPGTVPGANMVSRGPGDTYLTTVNPPTTVRVATTGNMTGYNPAGIGSFSGAPSIIDGVTLANGDRVLVKDQTDARQNGVYVVVNAASGVWNRAADFDTAREITNSPLVGVTAGATNAGQHFRQSNPTFNTFNTDAITWAPFITTDAAGNSFTLNFGWHDDVDGGRRESLIDLLVTLRVADAAFANDLFLTNQLRVNEFSTNAGSQYFDEIVMFEVIRPNVTINKGIVGYNGVGLTLGGVTFNPPDGSTAFGGTPVYTATQASAIGSSDVSLLSDAGDRVRYAIVLQNEGRGDAYDVTVTDTIPADYIRPATLAAANFAVRRGDGTLLTGDVVSGTVRVATTAPLTGATYATSPNNGQFTNAPRIIDGVTLNVGDRVLVKDQSVASQNGIYVVTSVFPGVNQATLTRADDFDDDAELTGGYRVAVLGGLSSNANRAFSTPGPITLNTTPITWTDAGVSDYYAVYNPLTGVFSVTLADNYTAGNTTAPTRDDRPGGLSRGASGPASNVVAVTNGSNTVIITYDVTLGDNVEPNRQIINTATLTHVATSDGGVDDQPDPFDTAQVTIRRPTIAKTLTATEIEDSFNNRQQAVIGELITYTLTLTVPEGVMSNATLTDTLDAGLAFVDVTGVSASPALAFTGGGLPTVGATPANTTIGAGGQTITFNFGAITNSNRDNTVEETIVITYRAIVLNTSANQSGAQRNNRVEFSWVVSGQGSYALTPVEAANVTIIEPTLGVAKTLPPGVYDAGDLIDYTITFSHTAGSQGTAYDAVLTDALPIDPFGSGSLILTPTILSVTDSAGTLTTADFTLTGSNATSWTLSNPTPVDVAPGRVVTITVRGTLSNAAMPGAAITNTAFLRWTSLDGTPGQRSTHNAASTERTGDDGPGGALNDYAATGSVAFIVPTVTPGKALIATSEAHTSGSNVAIGEIVRFRIAIGGPEASVYAFSLVDRLPPGLTFLNDGSARFVFIADNNITTAGVYDVAPVSCPAISPAGVTTLADVLNPATLLSSSINCTFGDSNISSNETVNQDVYASGTDVFFRFGNLSNNDNDPGEEFIVVEFNAIVDNDTFDPNDAGNVRSNTVVARMNPPGFGAFETAPSPEVTVTVVEPNIPFNVATNNKIATPTSGDAFDVITYTVTYTNATGVTVTDAFDVRLLDVLPTDMTLITGSVAVTSSCATGITNSSAGNTVDVTVGSVPPGCSVTVTYQATLNVSVIPGQTITNTATLTYTSLPGSSGTGGFFGSTAGSGGSATGERNGSGGINDYAGSDTATVTIVAPTLAKRIVATSEAHTADPLVLADFTNTGFDGLTGSWNTNVFTYPTFVRISGSATESGGGYITFASPVDLSNHTALALSARLVAGNGADNIDVHLQDADGTNWRWRFPASSFNFSTFTLVPQSLIGPNSTTIAAGTTPGLNLRNITRLEIRGDNGTAQFAIDIDAVIAFGNAAVPGEIVRYRLIATIPEGTSPNLQLHDRIPFGMRFINDDTVRVAFVSNSGVITSTSAGAQVPALSGAGLNITGNQDSVIGLSLAVGSGNGLAIGEGTAFDGNVSNTSTVTTDTDTFNDGSDVYFRLGNVVNNDNDDDLEFVVVEFNAQVLNTFSDGNQSGRQLNNDFRYLRSGIQVGTTSVTNDVNRVTVVEPQINNLSKTISGAPPADAGDVFTYTLRFANGVAWPSSPAVPVRVATTGNIAGFNPTGGFGGTGQFTNAPATVDGVTLNVGDRILVRSQANPAQNGVYTLVFIDPFTGARTWDRATDLDSNAELAIGYRVIVQEGSLAGRTYYLDEPLPSSINAGPILWRDVDPALTVAVATTGNLGGGTFDATGGTLGRGTLSTTATVIDGVTVNATNFPVGTRILVKNQTTQSQNGIYRVTGFSGSTMNLERVAEFDSRPEAIDGTQVYVTGGTINAGRTFAVSGAPSGTPITTSLTFVLVDQVTAFDVTVYDQLPPTLELLGVQIDAPTGTTATNGSTLGVGGVISYTLDRLDSVQDITSGRTDVVVTATVRVVAGTVAGAQITNTARVQYTSLPGERGTIANPTGSSVAAGTAGTQNGERTGGDVPNPINNSSPSINTIRNNYSVGAIALNRLAQPSFDKQFQGGSISDDDTSVPGTSGISVTVGEAVLYDLLVTMPEGTTNNLRVVDAVPDGMRFDTSFNGVGYQIVTSAGGLLTDNFSNPAAVASPTLTVSGTGTLGDDGVDALFTFGNVTVDDDNNPNNNAFIIRVRLIVTNTTANQSGATRANGGALRYNDGYSGADVTLRDPTEPQVTVVEPTPSILKSVSGAAADAGDPITYTIRLENSAPRSEMTAYDVVISDTIAPELINPTIVAVSATGAPVSVADFEIVTVGPDRILRTTAPITLPLGSTVIITFTGDLTSTVTTDQIITNRASMFWSSTPGANPDERNGSGVPNPPECSSLPGNCNLDNTQLNNYGLISSVTTTAIAPVVVSKSVIEGVAPSTSGTNVTIGEIVTYRLAVSLPEGVTSGLVITDTLPAGMAYLPGSATLVTGTLATGDPALSGGHPAGAGTLAFNGVFSDPTDPAVTPIGSLQFLNGTDVRFTFDQITLPGDNDTRNNTFFIRYQAVVLDVPGNTGFTGSQTTLTNSGQFDVPSTPQPPVDLLIDPNGATVTVVEPELAIAKSVAPTSGDAGDPVTYTITLSHTARSLADAFDVAITDALPATIGSSLTAPITIAQVNATHSVDGDITGNFGVTSNTLTTTTPFTLPLNATVTVTITGVLRQSVQPGETITNTVALTSTSLPGLNQDLSPDTTGVSDGTDRERSRSASSSVTLSTGQGAFSKELFATSAPHTSGEDITIGEIISYTLIVDLPEGTIRNLVLTDDLPAGLDYEGFTVITDAAQSGGLLTQDFVGTVPSITVTGGAGSGDDVTLTFDSDVVVTGDNNAANNRFLVVVRVRALDEPGMVGLIPPGQTTLTNTAAMRYTDGSNITRTFTDTETVRVVEPQLTITKNIVQTVANAGDPITITLTVTNTGTSDAFDVVITDTLPPDFDAATTTFGAAGSDYPATFTPSRTGSEVRYEGGPIPAGATVTFTFRVNLTGTVTPGATIVNTARMARSTSLPGDDPTERVQTPVDSSDTMTIRSNSLSGFVYVDADNDGIFDTGESGIGGVTITLSGTDHLGNSVLLTTTTTITGFYRFDNLRPGTYTLAETQPAGYLDGRDTIGTQGGTTGNDVLSNIVLPVDASTNGENNNFGELLPARIAGFGYEDDDNDGVFDTGESGISGVTITLSGTDDLGNSVLLTTTTTVTGFYAFDNLRPGTYTVSETQPTGYLDGRDTAGTLGGDTTLNDRIASITLPSGVASLNNNFGELRPASLSGRVYRDDNNNGSLDAGEPGISGVTITLSGTDDLGNTVTLTTTTDASGVYTFTNLRPGTYTVSETQPSGYLDGAESVGSAGGSVITNDVIGNVTLSAGVAATGYNFGELLAARIAGFVYEDDDNDGVFDTGESGISGVTITLSGTDDLGNGVLLTTTTTITGFYAFDNLRPGTYTVSETQPSGYLDGRDTAGTLGGDTTLNDRIASITLPSGAASLNNNFGELRPASLSGRVYRDDNNDGIPDAGEPGIGGVTITLTGTDDLGNSVLLTTTTSITGFYTFDTLRPGTYTVSETQPIAYNDGIDRSGTAGGDLINDQVSNIVLGAGVDAVNYDFGERGTFVSGIVWIDTDRDGTLDGGENGRLGGVTVTLSGTDLLGNSVLLTTTTTITGFYIFDNLPAGTYVIEQTQPTGYGSSTPNTLSVTVPLTGLTDQNFGETVSTLSGYVYVDSNNNGVFDAGESGIGGVTVTLTGTDVNGVSVTLTTLTLADGSYRFENLLAGTYTISETQPLIYSDGLESIGTIDGTPVGMLVSNDVIGNITLSAGTDGINYNFGELADAGLGDRVWLDRNGDGAQDPGESGIGGVQVYLDLNNDGVLDAGEPVTTTNALGQYFFGNLPGGTYTVRVDTTTLPGGVGQTYDLDGATVTPHAATASLAAGATRTDVDFGYRGTASIGDRVWLDRNGDGVQDAGEPGLSGVIVYLDLNGNGVRDADEPFDATDASGNYLIGGLLAGTYTVRVDASTLPDGVSATYDLDGVGTPGVVTGVTLSSGQARTDVDFGYRGTASIGDRVWNDANANGIQDAGETGVSGIVVALYDSTGTLLITTTTDLNGNYLFDNLPAGTYTVGVGATPGRSISPRGAGSDSALDSDIDRATRRSNPITLAIGEDRRDIDIGLYQLASVGSLVWLDRDLDGIREADEPGIGGIEVRLLRSDGTVVATQMTDANGYFMFTDVEPGEYRIAFSVPSGYYVSPFRQGNDRSTDSDADPATGLTPIFTLTPGQIDPTWFMGLSPISPTAIQLTRFSAERGAQGVVVRWETAAEYGTRGFYLERSATGSRSDAVRITDRLIPARGSVSSGAAYEWNDTTAAPGTRYTYWLIEETVDGSTHIYGPATLASTTGGGYTVMLPLIVR

Crispr_ID: NC_009523_22

• CRISPR_ID: NC_009523_22
• CRISPR_location: 1463873-1463987
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_22

Consensus_repeat	Method
CGCCTGCTGTCTCTGGGGACGGGTCGTCTGA	CRISPRCasFinder

spacers of NC_009523_22

>22.1|1463904|53|NC_009523|CRISPRCasFinder
CGTACCTGCACTATCCGGCGATCTCCACTCTGATACGCTTTCTGAACCAAACG

CRISPR arrays and Neighbor proteins around NC_009523_22

CRISPR arrays

The CRISPR arrays of NC_009523_22

>merge|NC_009523|22|1463873-1463987|CRISPRCasFinder
CGCCTGCTGTCTCTGGGGACGGGTCGTCTGACGTACCTGCACTATCCGGCGATCTCCACTCTGATACGCTTTCTGAACCAAACGCGCCTGCTGTCTCTGGGGGCGGGTCGTCTGA

>NC_009523|22|19|1463873-1463987|CRISPRCasFinder
CGCCTGCTGTCTCTGGGGACGGGTCGTCTGA	CGTACCTGCACTATCCGGCGATCTCCACTCTGATACGCTTTCTGAACCAAACG
CGCCTGCTGTCTCTGGGGGCGGGTCGTCTGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041333135.1|1461746_1462226_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040987.1|1467651_1467951_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955947.1|1455943_1457149_-|elongation-factor-Tu	unknown	unknown	gnl|CDD|234596
NC_009523.1|WP_011955956.1|1466167_1466614_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009523.1|WP_011955944.1|1454111_1454783_-|50S-ribosomal-protein-L4	unknown	unknown	gnl|CDD|235404
NC_009523.1|WP_011955950.1|1459945_1460380_-|30S-ribosomal-protein-S12	unknown	unknown	gnl|CDD|235355
NC_009523.1|WP_011955960.1|1470876_1471818_-|radical-SAM-protein	unknown	unknown	gnl|CDD|273539
NC_009523.1|WP_011955964.1|1477327_1478290_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011955951.1|1460685_1461600_+|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl|CDD|273540
NC_009523.1|WP_157040986.1|1464735_1465092_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955961.1|1471845_1472667_-|nitrogenase-iron-protein	unknown	unknown	gnl|CDD|349759
NC_009523.1|WP_011955958.1|1468053_1469481_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	unknown	unknown	gnl|CDD|238927
NC_009523.1|WP_011955943.1|1453830_1454115_-|50S-ribosomal-protein-L23	unknown	unknown	gnl|CDD|235586
NC_009523.1|WP_011955946.1|1455520_1455829_-|30S-ribosomal-protein-S10	unknown	unknown	gnl|CDD|179076
NC_009523.1|WP_011955963.1|1474341_1477248_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223650
NC_009523.1|WP_011955962.1|1473423_1474329_+|hypothetical-protein	unknown	unknown	gnl|CDD|200561
NC_009523.1|WP_011955949.1|1459415_1459889_-|30S-ribosomal-protein-S7	unknown	unknown	gnl|CDD|235398
NC_009523.1|WP_011955948.1|1457203_1459309_-|elongation-factor-G	unknown	unknown	gnl|CDD|234569
NC_009523.1|WP_011955945.1|1454827_1455460_-|50S-ribosomal-protein-L3	unknown	unknown	gnl|CDD|234564
NC_009523.1|WP_011955959.1|1469477_1470908_-|nitrogenase-component-I-subunit-alpha	unknown	unknown	gnl|CDD|238929

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011955961.1|1471845_1472667_-|nitrogenase-iron-protein	gnl|CDD|349759	cd02040, NifH, nitrogenase component II NifH. NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.	1.14149e-177
NC_009523.1|WP_011955947.1|1455943_1457149_-|elongation-factor-Tu	gnl|CDD|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	0
NC_009523.1|WP_011955949.1|1459415_1459889_-|30S-ribosomal-protein-S7	gnl|CDD|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	4.14685e-94
NC_009523.1|WP_011955944.1|1454111_1454783_-|50S-ribosomal-protein-L4	gnl|CDD|235404	PRK05319, rplD, 50S ribosomal protein L4; Provisional.	4.77826e-102
NC_009523.1|WP_011955960.1|1470876_1471818_-|radical-SAM-protein	gnl|CDD|273539	TIGR01290, FeMo_cofactor_biosynthesis_protein_NifB, nitrogenase cofactor biosynthesis protein NifB. This model describes NifB, a protein required for the biosynthesis of the iron-molybdenum (or iron-vanadium) cofactor used by the nitrogen-fixing enzyme nitrogenase. NifB belongs to the radical SAM family, and the FeMo cluster biosynthesis process requires S-adenosylmethionine. Archaeal homologs lack the most C-terminal region and score between the trusted and noise cutoffs of this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Central intermediary metabolism, Nitrogen fixation].	4.78048e-99
NC_009523.1|WP_011955964.1|1477327_1478290_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.00605e-20
NC_009523.1|WP_011955951.1|1460685_1461600_+|pyridine-nucleotide-disulfide-oxidoreductase	gnl|CDD|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	6.75687e-55
NC_009523.1|WP_011955950.1|1459945_1460380_-|30S-ribosomal-protein-S12	gnl|CDD|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	1.00495e-81
NC_009523.1|WP_011955958.1|1468053_1469481_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN	gnl|CDD|238927	cd01965, Nitrogenase_MoFe_beta_like, Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains, a single [4Fe-4S] cluster from which electrons are transferred to the P-cluster of the MoFe and in turn, to FeMoCo, the site of substrate reduction. The V-nitrogenase requires an iron-vanadium cofactor (FeVco), the iron only-nitrogenase an iron only cofactor (FeFeco). These cofactors are analogous to the FeMoco. The V-nitrogenase has P clusters identical to those of MoFe. In addition to N2, nitrogenase also catalyzes the reduction of a variety of other substrates such as acetylene The V-nitrogenase differs from the Mo-nitrogenase in that it produces free hydrazine, as a minor product during N2-reduction and, ethane as a minor product during acetylene reduction.	0
NC_009523.1|WP_011955943.1|1453830_1454115_-|50S-ribosomal-protein-L23	gnl|CDD|235586	PRK05738, rplW, 50S ribosomal protein L23; Reviewed.	2.82388e-48
NC_009523.1|WP_011955946.1|1455520_1455829_-|30S-ribosomal-protein-S10	gnl|CDD|179076	PRK00596, rpsJ, 30S ribosomal protein S10; Reviewed.	2.27605e-64
NC_009523.1|WP_011955963.1|1474341_1477248_+|ABC-transporter-permease	gnl|CDD|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	1.912e-06
NC_009523.1|WP_011955962.1|1473423_1474329_+|hypothetical-protein	gnl|CDD|200561	cd10935, CE4_WalW, Putative catalytic domain of lipopolysaccharide biosynthesis protein WalW and its bacterial homologs. This family corresponds to a group of uncharacterized lipopolysaccharide biosynthesis protein WalW found in bacteria. Although their biochemical properties remain to be determined, members of this family is composed of a seven-stranded barrel with detectable sequence similarity to the six-stranded barrel rhizobial NodB-like proteins, which remove N-linked or O-linked acetyl groups from cell wall polysaccharides and belong to the larger carbohydrate esterase 4 (CE4) superfamily.	1.09614e-08
NC_009523.1|WP_011955956.1|1466167_1466614_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.5021e-13
NC_009523.1|WP_011955948.1|1457203_1459309_-|elongation-factor-G	gnl|CDD|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	0
NC_009523.1|WP_011955945.1|1454827_1455460_-|50S-ribosomal-protein-L3	gnl|CDD|234564	PRK00001, rplC, 50S ribosomal protein L3; Validated.	3.68653e-119
NC_009523.1|WP_011955959.1|1469477_1470908_-|nitrogenase-component-I-subunit-alpha	gnl|CDD|238929	cd01967, Nitrogenase_MoFe_alpha_like, Nitrogenase_MoFe_alpha_like: Nitrogenase MoFe protein, alpha subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. Three genetically distinct types of nitrogenase systems are known to exist: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). This group contains the alpha subunit of component 1 of all three different forms. The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. The role of the delta subunit is unknown. For MoFe, each alphabeta pair of subunits contains one P-cluster (located at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein is a homodimer which contains, a single [4Fe-4S] cluster from which electrons are transferred to the P-cluster of the MoFe and in turn, to FeMoCo the site of substrate reduction. The V-nitrogenase requires an iron-vanadium cofactor (FeVco), the iron only-nitrogenase an iron only cofactor (FeFeco). These cofactors are analogous to the FeMoco. The V-nitrogenase has P clusters identical to those of MoFe. In addition to N2, nitrogenase also catalyzes the reduction of a variety of other substrates such as acetylene The V-nitrogenase differs from the Mo- nitrogenase in that it produces free hydrazine, as a minor product during dinitrogen reduction and, ethane as a minor product during acetylene reduction.	0

Protein sequences

>NC_009523.1|WP_041333135.1|1461746_1462226_+|hypothetical-protein
MSEQTPAAGQPEPQKETPDLATELREMGQQIEALFRAFIESERAKQMQATVAKSVQNVAAVMRETVEKLQSDPRVQQVEDRGRQALERARESQVFHDVQETLVNGLEQINAQLHKLVEKLEAERAAAGTQSAQEGEVNPPVEHVPLEAPATGETKKLEE
>NC_009523.1|WP_011955951.1|1460685_1461600_+|pyridine-nucleotide-disulfide-oxidoreductase
MRELIIIGGGAAALSAGMYALGKQLDFLMIYESLGGKAGWRQNIIGQEEVEYLAGEEAVRIFERKIAMQTDRTIRDTVLAVQRAGTGFRVETRTHGAFEAMAVIVATGATPVRLKAPGAQELLGQGLGYSVTTHAHLLAGKTAAVIGSTHRALRGVAELARTAGKVYLIIPDPNAASLPMVHAVSQRPNVEILAGYTVDEVAGPMNVEEIVVSRDGQQRRIAVDAAFADLGLHPCSECVQHLVRTDQDGFIWVDERMATTVPGIFAAGDVTTSFGEQVLIAIGDGARAALSAYDYLLMRAPVVR
>NC_009523.1|WP_011955950.1|1459945_1460380_-|30S-ribosomal-protein-S12
MPTINQLVRKPRKRVTKKVKAPALRFSLNVLKGKLTRGKGSPFKRGVCTQVRTMTPKKPNSALRKIARVRLSNGMEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGTLDAQGVANRKQGRSKYGTKKASAVPAKKK
>NC_009523.1|WP_011955949.1|1459415_1459889_-|30S-ribosomal-protein-S7
MPRRGTIERRIPPPDPRYNSVLVQQFINKVMQRGKKSIAEKIVYQAFDLAAQRLKKPALEIFETAVRNAGPVIEVKPRRVGGATYQVPVEVKSDRRQSLAMRWLLMSARARSGKPMYERLAAELIDAYNNTGATIKRKEDVQRMAEANRAFSHYGRF
>NC_009523.1|WP_011955948.1|1457203_1459309_-|elongation-factor-G
MPREVPLERIRNIGIIAHIDAGKTTTTERILFYTGRTYKLGEVHEGTAVMDWMEQERERGITITAAATTAEWTVEGVPYRINIIDTPGHVDFTAEVERSLRVLDGGVVVFDAVAGVEPQSETVWRQADKYHVPRICFVNKMDRIGANFERTVEMIRERLGAKPVPIQFPIGSEDRFRGIVDLITNKAVLYVDDQGKREELDAIPTEIADEVERLRNEMIEAIAETDDELMLLYLEGEELSVEELRRALRKATIKGQLVPVLCGAALRNKGVQRLLDAIVHYLPSPVDIPPVRGTRPGQVAGDDGVEMITRPTSEDAPFTGLVFKIVSDPFVGKLAYFRVYSGKLETGSYVLNSTRNQRERIGRLLQMHANHREEIKEVYAGDIAAMVGPKQSYTGDTICDPNDPIVLESIRFPEPVIQLAIEPKTKADQDKMAVALSKLAEEDPTFRVFTDQETGQTIIAGMGELHLEVIVDRMRREYKVEANQGKPQVAYRESITVPADVDSKFVRQTGGKGQYGHVKLQVEPLERGKGFEFINAIVGGVIPREYIPAVEAGVKEAMASGVIAGYPVVDLKVTLYDGSYHEVDSSEMAFKIAASMGLKEAVRKGRPILLEPVMKVEIVTPEDFLGTVLGDINSRRGHVEGMEARGNAQVIRAYVPLASMFGYTTDLRSATQGRATSSMEFAYYQPLPEALAKEIVEKRRG
>NC_009523.1|WP_011955947.1|1455943_1457149_-|elongation-factor-Tu
MAKQKFERTKPHVNVGTIGHVDHGKTTLTAAITKVLALQGAAQFVSYDQIDNAPEERARGITIAIRHVEYQTARRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAPDGPMPQTREHVLLARQVQVPAMVVFLNKVDMMDDEELLELVELELRELLSNHGFPGDEVPIVRGSALAALSSTSTDINAPEYKCILDLMNAVDEYIPTPVREIDKPFLMPIEDVFGIKGRGTVVTGRIERGKVKMGDTVEIIGMTHEAPRRTVVTGVEMFQKTLDEGIAGDNVGVLLRGIERTEVERGQVLAAPGSIKPHAKFKANVYVLKKEEGGRHTPFFSGYRPQFYIRTTDVTGAIHLPEGVEMVMPGDNIEMTVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD
>NC_009523.1|WP_011955946.1|1455520_1455829_-|30S-ribosomal-protein-S10
MAKQKVRIRLKAYDHKILDQSARQIVEAAERTGALVAGPVPLPTKIEKHSVIRSPFIDKDSQEQFEIRTHKRLIDVLDPSQQTINALMKLNLPAGVDIEIKL
>NC_009523.1|WP_011955945.1|1454827_1455460_-|50S-ribosomal-protein-L3
MIEGLLGRKIGMTQVFDATGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVKAKSLTRPEQGHLRGAGKLLRHLREFRADNIADHKVGDVLTVEMFTPGQRVDVIGTSKGRGFQGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHVLKNTRMAGRMGNQRVTVQNLTVVDVVPERNLLLVRGSIPGAKNGLVMVRRAIKGS
>NC_009523.1|WP_011955944.1|1454111_1454783_-|50S-ribosomal-protein-L4
MEARLYNQSGEEVGVIQISDYVFGIEPNVPVMHQAMERQRANARLGTHNTLGRGEVEGSTRKLYRQKGTGRARQGSIRAPHRKGGGIAHGPHPRKYTKAMPRKMRRLAVRSALSARYRDGAITFLDRLTFEKPRTKDMIAVLNALNLTGKTLIVLDQKDEYVRRSANNLPNVKTLLAHYLNVIDLLTHDHIVMLQAAVDVAQGYLDQPEHVVAAAGASEEEAS
>NC_009523.1|WP_011955943.1|1453830_1454115_-|50S-ribosomal-protein-L23
MNPHQIIKRPLITEKNTNLMRFNKYSFEVDRNATKPQIKRAIEEIFNVRVTAVHTMNVRGKLRRRGRQYGYTADWKKAIVTLAEGDRIDLFEGA
>NC_009523.1|WP_157040986.1|1464735_1465092_-|hypothetical-protein
MIATADIGGRRVIYGMLPPAVSTVRITTNASHPIEAIEALVSEGLFCALTPLFTFALVTFYDADGCARHVQPLLDPDVIPARQPCRARWWAWLRRWLVSAVSVRDAYTYHSRSHRRRQ
>NC_009523.1|WP_011955956.1|1466167_1466614_-|response-regulator-transcription-factor
MLAWTASDRNLLTLIRWQRRRALQVAALVLTSWCDDGALALLVSAGATACLPLALDATVLEHASCCAAHHGWHGDPAHCIRAQRWQADVGLRWRRLTRQKRQVALLLAHGQDTVAIATLLGMSRKTVEYHTGRLLAKLEMKTRLNVAL
>NC_009523.1|WP_157040987.1|1467651_1467951_-|hypothetical-protein
MTNSKRSPDMRTNGCKHLARAITNERIIQMDDVYGCDETVVNGSDPTILNHGDYLLIEHETNTRYIYRRAADDAPLHPLVSRIRHGGIIYALEWIEEED
>NC_009523.1|WP_011955958.1|1468053_1469481_-|nitrogenase-iron-molybdenum-cofactor-biosynthesis-protein-NifN
MTSCLTLQERAVAINPTRSCAPIGAMLANYGIHGAITINHGSQGCATYPRHQMSRHFREPVEVATTSLTEKTTVYGGKQNLLAALKNIWERFHPTMIMVCSTCLSETIGDDIPAIIDEFLDKHPDVTIPILSVKTPSYIGNHTTGFDNFLKEIALNLPDRRKKKGETNGRINIIPGWVNPGDIRELKHMLREMGLHGLWITDYSETLDGGYYDPRPHVPRGGTTIEELRSSSKSLATIALQRHVGGEAARIYERRYNVPAHVLTMPIGLKNTDAFVNTLIEITDHTIPESLEVERARLLDALVDTHMYTTGLRVALYGDPDLLEGLVGLIAEMGMTPAYILTAADNRPWGERMVELTGELGVESEIILKGDLHELHKRIKQQPVDLLIGHSKGRFIAEAENIPLVRVGFPVEDRFGHHRRSIVGYNGAIALVDEITNTIFERRATTIVSNTLIETGVEGPTSVPIALRNGTTAHG
>NC_009523.1|WP_011955959.1|1469477_1470908_-|nitrogenase-component-I-subunit-alpha
MQFKCNQTLPERAIHIALKGPGGKCQRGDGTTCFIANNVATTPGDMTERGCTYAGCRGVVGGPVKDAIQLTHGPIGCAFFSWGYRPHLADSDFHMKYTFVTDMNETNIVFGGEKKLLQSIIEANAEFPNAKAVFVYNTCSTALIGDDGRDVAKQAEAIIGKPVVFFECEGFRGVSQSMGHHVGNETIFRQLVGSVEPEGDFSRSINIIGDYNIKNDIRTFEYLFEALGLRIIARFTGNVSVDDLKIMHKAALNIVHCQRSATYIADMMKDKYGTPYINVTLWGMKNMAKALRDTAAFFGLEARAEEVIAREVARIQPYIDAYRQRLQGKRVFIYQGGPRVWHWIELLRELGMETETAATTFGHTDDYEKIFNQIGEGALVIDNPNVPEIEEILTRRRPDLFISGNKERYLAYKMGVPFVNGHTYDTGPYAGFVGMVNFARDIDKALHAPVWNIVHQHARPAPVARHAVHGSEEVES
>NC_009523.1|WP_011955960.1|1470876_1471818_-|radical-SAM-protein
MDASSAGSCQGVCFPNIDLSTHPCYSRAAHFRFGRIHVPVAPRCNIQCNYCIRRYACPNENRPGVTMRVVSPDEALQTVRHAVARDPRLRVLGVAGPGDALANNATLTTFERARDEFPHLIRCLSTNGLLLPDQIDAIEQAGITTLTITINAVDPAIAEQIYAHVRYRGKTYRGREACTLLLRNQLTGLREAALRGMAVKVNSVLIPGVNDHHLIDVARTVKDHGAYIMNIIPLMPLAKFAHLPEPSPALVNRVRDECATVIEQFRNCQRCRADAIGVPGEEGCGAGERVCIPKFLAQRKEQRDAVQMQSDPA
>NC_009523.1|WP_011955961.1|1471845_1472667_-|nitrogenase-iron-protein
MRQVAFYGKGGIGKSTTQQNTAAALASMGYRLMVVGCDPKADCTRLLLRGVRQPSVLDTLRDVGPESVQLEKVVVQGYGGVKCVESGGPEPGVGCGGRGVITAIQTLETLGAYKDDLDYVFYDVLGDVVCGGFAMPIREGYAEEIYIVCSGEYMALFAANNICKGIKKFAERGYARLGGLICNSRLVENERALVEEFARRLNTKMIHFVPRSKDVQRAEINKKTVIDYDPELPQAHEYRELARKIDENDEFTIPTPITQDELEDLMREYGIVD
>NC_009523.1|WP_011955962.1|1473423_1474329_+|hypothetical-protein
MATRLTIHVLFTLDCESIAIRAAKEGPRSWEQSARAIEGYCNRLLRAGYPPTLFVAPQCAVEHTPLLEELAGRGVELGLYVNPLQAESGSYRNFLGTLAPDVQRRLIDDAAERFADALGVRPRSFRPCKHSASDATYRLLYELGFRQGSIAQPGFMLPRIGVEWEHVVHHPRYVDAQHHERAGDLPFLDVPVTTDPDQRQITNQPYELRIDAGTLDALHQPVIERAIERMIEDAALFCALCFTSDNRPAYDNDNDKHSRTLEAVLDYLEALGEQHDLVPTTLAGAHERFRALRHTVSAARE
>NC_009523.1|WP_011955963.1|1474341_1477248_+|ABC-transporter-permease
MLRQLTIALSFPPVIWRRLLSHFGLALAVWSGMTLAAGMVVSIPVYAEASGYRILLAALTERAVADPLPPFAMVYRYGGASDPSISWQQYLLTDQLAGNLPAAGIDLPAPPGVRFAATEKLRVGFPDGAGREVLFARIGFLSGIERHIQIVDGDLPRPFTGDGPLDVLVSETTAAKNTLLIDDLYRVESTGRGPRIDVLVRIAGIWRPADADAGYWFQPPSTYSDVFLVPEESFALIADVPDARFVTLAAWYTAIDGSSVRSSDVERLRERIATATADIQQRLPGAQLVRSPMEALERHRDQVRVLTVTLALFAVPLLVVIGYFVLQVAGMTVARQQQEMAILRSRGSSRWQVLGLALGEVLLLGAAAWAAGLPLGLLLAHVISWTVSFLRFAPLDAPAPTLLPASPWHALATVLLALPAVVIPALSAAGRTIISYKIERARATRPPLWQRLYLDILLLIPAVYGYQQLRLSGMIGVPGVTVGTDDPFRNPLLLLAPALMVFAGTLVGMRFLPLLLRALAWIAGLLPGVALVTALRFLSRTPGAYGGPALLVALTLALATFTSSMALTLDRHSEERAYYRGAADVRLVYPGAAITSANIAGDREIAPAETSLDLSGGTLGTTGEADTTPSTAYLFVPIEEYLLIPGVTGATRVAPGKVDIIVGSARPISGIFYGVDRTTLAAVLADAWRPDYADESLGALMNRLADYPDAALVSETFATQQGLRIGDRFTLAMNDRGQTQNITFTVVGMLRYFPTLYDQGPPFVIGNLDYSFDSQGGLYPYEVWLSLAPDASLQAVAAAGIGYGLRMIRSTPQTLLDLDLRRPERQGLFGLLSVGFLATTVVTVIGFVAYTLLSFQRRLVELGVLRAIGLSTRQLSVLLVFEQTLIVGFGAAPGTLVGILTSWLFIPFLQVRTGVYPETPPFVVQIDWERIALVYGISGGLLAATIVVIVLLLHRMRIFEAVKLGEAV
>NC_009523.1|WP_011955964.1|1477327_1478290_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITALNLLLRLPELGTINRKEAAAVVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFYQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP

Crispr_ID: NC_009523_23

• CRISPR_ID: NC_009523_23
• CRISPR_location: 1492763-1492846
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csa3

Consensus repeat of NC_009523_23

Consensus_repeat	Method
GATGTCGAGGCGCAGCGCCGCTGCGCCC	CRISPRCasFinder

spacers of NC_009523_23

>23.1|1492791|28|NC_009523|CRISPRCasFinder
GTACAGGGGGGTGTGCGCGGGGCGAGGC

CRISPR arrays and Neighbor proteins around NC_009523_23

CRISPR arrays

The CRISPR arrays of NC_009523_23

>merge|NC_009523|23|1492763-1492846|CRISPRCasFinder
GATGTCGAGGCGCAGCGCCGCTGCGCCCGTACAGGGGGGTGTGCGCGGGGCGAGGCGATGTCGAGGCGCAGCGCCGCTGCGCCC

>NC_009523|23|20|1492763-1492846|CRISPRCasFinder
GATGTCGAGGCGCAGCGCCGCTGCGCCC	GTACAGGGGGGTGTGCGCGGGGCGAGGC
GATGTCGAGGCGCAGCGCCGCTGCGCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041333156.1|1502979_1503345_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042
NC_009523.1|WP_011955970.1|1485676_1487323_-|transposase	unknown	unknown	gnl|CDD|183876
NC_009523.1|WP_011955978.1|1497491_1498472_+|deoxyhypusine-synthase	unknown	unknown	gnl|CDD|376661
NC_009523.1|WP_011955976.1|1494461_1496255_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|131259
NC_009523.1|WP_011955966.1|1482478_1483099_+|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224759
NC_009523.1|WP_011955973.1|1489160_1492739_+|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl|CDD|131231
NC_009523.1|WP_011955972.1|1488241_1488652_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955964.1|1477327_1478290_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011955977.1|1496309_1497254_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011955971.1|1487410_1488238_+|cyclase-family-protein	unknown	unknown	gnl|CDD|224790
NC_009523.1|WP_085979421.1|1499935_1500993_-|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011955981.1|1503434_1504283_+|arsenite-methyltransferase	unknown	unknown	gnl|CDD|237007
NC_009523.1|WP_011955965.1|1479279_1481934_+|hypothetical-protein	unknown	unknown	gnl|CDD|199212
NC_009523.1|WP_011955968.1|1484098_1484884_+|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009523.1|WP_011955974.1|1492852_1493527_-|nucleoside-monophosphate-kinase	unknown	unknown	gnl|CDD|234711
NC_009523.1|WP_157041264.1|1483123_1483711_+|protogloblin-ApPgb	unknown	unknown	gnl|CDD|381264
NC_009523.1|WP_011955982.1|1504349_1505648_-|organoarsenical-effux-MFS-transporter-ArsJ	unknown	unknown	gnl|CDD|340883
NC_009523.1|WP_011955969.1|1484920_1485238_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955975.1|1493557_1494244_-|haloacid-dehalogenase	unknown	unknown	gnl|CDD|184746
NC_009523.1|WP_011955983.1|1505772_1506783_-|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|169599

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_041333156.1|1502979_1503345_+|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	8.6e-19	62.8	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_041333156.1|1502979_1503345_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	3.39277e-16
NC_009523.1|WP_011955970.1|1485676_1487323_-|transposase	gnl|CDD|183876	PRK13169, PRK13169, DNA replication initiation control protein YabA.	0.00111143
NC_009523.1|WP_011955966.1|1482478_1483099_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|224759	COG1846, MarR, Transcriptional regulators [Transcription].	3.04687e-14
NC_009523.1|WP_011955976.1|1494461_1496255_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|131259	TIGR02204, system_ATPase_and_permease_component, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.	0
NC_009523.1|WP_011955973.1|1489160_1492739_+|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl|CDD|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NC_009523.1|WP_011955975.1|1493557_1494244_-|haloacid-dehalogenase	gnl|CDD|184746	PRK14562, PRK14562, haloacid dehalogenase superfamily protein; Provisional.	1.61598e-85
NC_009523.1|WP_011955964.1|1477327_1478290_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.00605e-20
NC_009523.1|WP_011955977.1|1496309_1497254_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.50869e-15
NC_009523.1|WP_011955971.1|1487410_1488238_+|cyclase-family-protein	gnl|CDD|224790	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism].	1.8699e-64
NC_009523.1|WP_085979421.1|1499935_1500993_-|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011955965.1|1479279_1481934_+|hypothetical-protein	gnl|CDD|199212	cd10914, Peptidase_C25_N_1, uncharacterized subgroup of the Peptidase C25 family N-terminal domain. Domains in this subgroup are uncharacterized members of the Peptidase family C25 N-terminal domain family. Peptidase family C25 is a unique class of cysteine proteases, exemplified by gingipain, which is produced by Porphyromonas gingivalis. P. gingivalis is one of the primary gram-negative pathogens that causes periodontitis, a disease that is also associated with other diseases such as diabetes and cardiovascular disease. Gingipains are a group of extracellular Arg- and Lys-specific proteinases called Arg-gingipain (Rgp) and Lys-gingipain (Kgp); RgpA and RgpB are homologous Arg-specific gingipains encoded by two closely related genes, rgpA and rgpB, while Lys-specific gingipain is encoded by the single kgp gene (also called prtK, prkP). Mutant studies have shown that, among the large quantities of proteolytic enzymes produced by P. gingivalis, these three proteases are major virulence factors of this bacterium. All three genes encode an N-terminal pre-pro fragment, followed by the protease domain; however, rgpA and kgp also encode additional C-terminal HA (hemaglutinin/adhesion) subunits which consist of several sequence-related adhesion domains. Although unique, their cysteine protease active site residues (His and Cys) forming the catalytic dyad are well-conserved, cleaving the C-terminal peptide bond with Arg or Lys residues. Gingipains are evolutionarily related to other highly specific proteases including caspases, clostripain, legumains, and separase. Gingipains function by dysregulating host defense and inflammatory responses, and degrading host proteins, e.g. tissue, cells, matrix, plasma and immunological proteins. They are proposed to enhance gingival crevicular fluid (GCF) production through activation of the kallikrein/kinin pathways, thus increasing vascular permeability and causing gingival inflammation, a distinctive feature of periodontitis. RgpA and RgpB are also able to cleave and activate coagulation factors IX and X in order to activate prothrombin to produce thrombin, which in turn increases production of GCF. The gingipains also play a pivotal role in the survival of P. gingivalis in the host by attacking the host defense system through cleavage of several immunological molecules, while at the same time evading the host-immune response by dysregulating the cytokine network.	1.00548e-120
NC_009523.1|WP_011955968.1|1484098_1484884_+|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	3.63096e-104
NC_009523.1|WP_011955974.1|1492852_1493527_-|nucleoside-monophosphate-kinase	gnl|CDD|234711	PRK00279, adk, adenylate kinase; Reviewed.	6.21228e-74
NC_009523.1|WP_157041264.1|1483123_1483711_+|protogloblin-ApPgb	gnl|CDD|381264	cd12124, Pgbs, Protoglobins (Pgbs). Pgbs are single-domain globins of yet unknown biological function. Included in this subfamily are Pgbs from the strictly anaerobic methanogen Methanosarcina acetivorans (MaPgb) and from the obligate aerobic hyperthermophile Aeropyrum pernix (ApPgb). MaPgb is a dimeric globin which in addition to the 3-on-3 helical sandwich contains an N-terminal extension. This extension, along with other Pgb-specific loops buries the heme within the protein; two orthogonal apolar tunnels grant access of small ligand molecules to the heme. Like other globins, MaPgb can bind O2, CO and NO reversibly in vitro, however it has as unusually low O2 dissociation rate, along with a large structural distortion of the heme moiety. CO binding to and dissociation from the heme occurs through biphasic kinetics. ApPgb also contains heme, and can bind O2, CO and NO. This subfamily belongs to a family which includes the globin-coupled-sensors (GCSs) and single-domain sensor globins. It has been demonstrated that Pgbs and other single-domain globins can function as sensors, when coupled to an appropriate regulator domain.	1.80055e-123
NC_009523.1|WP_011955982.1|1504349_1505648_-|organoarsenical-effux-MFS-transporter-ArsJ	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.29537e-12
NC_009523.1|WP_011955981.1|1503434_1504283_+|arsenite-methyltransferase	gnl|CDD|237007	PRK11873, arsM, arsenite methyltransferase.	6.86021e-108
NC_009523.1|WP_011955978.1|1497491_1498472_+|deoxyhypusine-synthase	gnl|CDD|376661	pfam01916, DS, Deoxyhypusine synthase. Eukaryotic initiation factor 5A (eIF-5A) contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]. The first step in the post-translational formation of hypusine is catalyzed by the enzyme deoxyhypusine synthase (DS) EC:1.1.1.249. The modified version of eIF-5A, and DS, are required for eukaryotic cell proliferation.	6.52605e-32
NC_009523.1|WP_011955983.1|1505772_1506783_-|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|169599	PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated.	0

Protein sequences

>NC_009523.1|WP_011955973.1|1489160_1492739_+|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MKRSWVTLEGNEAAASIAYRLSEVIAIYPITPSTPMGELADAWAAAGKPNLWGTTPLVIEMQSEGGAAGACHGALQRGALTTTFTASQGLLLMIPNMYKIAGELTSTVFHIAARSIATHALSIFGDHQDVMATRQTGWALLASSSVQEAHDLALVAHAATLKARVPFLHFFDGFRTSHEINKIEQLTDDDLHAMIDPALIAAHRMRALTPDQPVIRGTAQNPDVYFQARETVNPFYAATPGIVQETMDRFAQLTGRAYHLFDYTGAPDAERVIVIMGSGAETARETATFLAERGEKVGVVSVRLYRPFSVAHFVAALPTTVQRIAVLDRTKEPGSSGEPLYLDVVTAMAESGRHLPVIGGRYGLASKEFTPAMVKAVFDELAKDQPKNHFTVGIIDDVSHTSLDVDQSFSIESPRTVRCLFYGLGADGTVGANKNSIKIIGEETNNYAQGYFVYDSKKSGSMTVSHLRFGPDPIRAPYLIERANFVACHQFSFLERIDVLKAAEPGAVFLLNSMYGPDEVWYHLPREVQDDIVRKKLKFYVIDGDRVAKESGMGRRVNTVMQTAFFAISGVLPREDAIAEIKRSIKKTYGKRGEAVVQQNYRAVDAALAHLYQVDVEKFAGFRSPFTRRPPVPEQAPEFVKEVLAPMIAYEGDSLPVSKLPVDGSFPTGTAAWEKRTIALEVPVWEPDICIQCGKCAYVCPHAVIRTKVYEPALLEGAPETFLSAEARFKEFPGYKYTLAISSEDCTGCGLCVEVCPAKDKRQVGRKAINMKPLVEVREREVRNWNFFLSIPDVPRTSLHVGSIKNSQLLQPLFEFSGACAGCGETPYIKLLTQLFGDRLLIANATGCSSIYGGNLPTTPYTKNAEGRGPTWCNSLFEDNAEFGLGMRLALDQQIEHVRELLPLFAPVVGQDLVDALLNADQSTEAGIAAQRERVELLKQRLHTLDRSQFPDVVEREHELLSLADVLVKKSVWIVGGDGWAYDIGYGGLDHVLASGYKVNVLVLDTEVYSNTGGQASKSTPIGAVAKFAAKGKSSPKKDLGLIAMAYGNIYVARVAMGADDVQTLRAFMEAEAYDGPSLIIAYSHCIAHGIDMRKGLDQQKLAVQTGYWPLYRYNPSLAAEGKNPLIIDSKDPSLPLEKFIYNETRYRMLVQSDPERAEMLLHQAEASVRARWQHYKELAALSEVRAERDGH
>NC_009523.1|WP_011955972.1|1488241_1488652_-|hypothetical-protein
MERYESGLVSPGQIDSLLKLRLVLLFAEYPWLRMSAATAQQRLRESPWAIADALDELAGAGLLNRVECCGQPMYRLTTAPEQRLRLERLARSFDDPQRRDEIYDLVRATHQERRFRDMGMARMGMTGVQEFDTVII
>NC_009523.1|WP_011955971.1|1487410_1488238_+|cyclase-family-protein
MCPPETLASMRSPEISRRNLLKFGLGAAVAAALPVGSAHAATVRRTTFRNVADLTHVLGTQFPLFPGAAPFRIQQAVSHDKDGYYGSILTYWEHSGTHMDAPVHFAPNGLFVDQLRIENLVVPAVVINITEKVRRDPDAVVTPDDIRAWERRYGRIPDNAAVLMASGWGARAGSVEAFRNTDSSGVMHFPGFGKEAIDFLLTERRISGIGVDTLSLDHGPSTTFAVHYTILPTNRWGLENLANLESIPPSGATLFVGAPKIASGSGGPTRVMAVW
>NC_009523.1|WP_011955970.1|1485676_1487323_-|transposase
MQIPDLNPDSIADLATRQIVIQLLNVIETLAAENAALRVENQNLRDEVARLKGRSGKPDIKPPTPPPSPPPADHSSEAERRTRTPRGKPKKNATLIVTHEERCGVDPATLPPDAVRHGTTDSIVQRLRIDVEVVRFVRERWYVPSTNTLITAPLPPGYRGGFCPTTHTIVPALGHGANVSQPALLRFLRDVGLKIGTGTVARMLLDPKGRWADEAAAIHQTGLATGSWVATDQTSTRVDGQNEVCHVVGNAWFTSYHTRPGGTRQDVLAVIWGQELRYRLNDESLAWLQARSLPHTLLRRLREALPRGTDMTAAELQQHLTNAGITLTPQQVQPVGDALALAAYHAQTQAPVLRWLLSDDAPVYDHLTTTHALCWVHDWRHYAKLAPRAPHHQAELAAFGERYWTFYRDLLAYQQAPTAAERARLADAFDALVEKETGYAALDDRISKTADKRTQLLAVLKHPDIPLHNNDMELAARRRVRKRDISFGPQSRDGARAWDTFQTLAATAAKLGVGFFHYLRDRIVTPETTPTLAERVAQRAGIAVPSSA
>NC_009523.1|WP_011955969.1|1484920_1485238_+|hypothetical-protein
MKPEYLVEIDEHGVSCHHQDGRVDVVRWDELRAVLIETSDRGPFETDVFWILVSERGECIIPQGATGDAELLARLQRLDGFDNLAVIEAVASTDNRRFVCWTAPV
>NC_009523.1|WP_011955968.1|1484098_1484884_+|DUF4058-family-protein
MELPFPGMDPYLELPALWPDVHARLISAMCDAIQEQLGPNYIALITPYIALENIEIAPARQVFVPDVGIVRDDVADAGAVTTAITPAPLTIPAQITVPTRYARIEIRSVLQQTLITAIELLSPANKRAGADGADAYEKKRQELFASSVHLLEIDLLRAGVRPRLARPLPPTAYCALLSRASRRPLVEVWPIALSDPLPVLPVPLADPDPDVALDVGAVLRQVYRRAHYERVIDYRADPPPPPLTPEEAAWLDHHLRARGLR
>NC_009523.1|WP_157041264.1|1483123_1483711_+|protogloblin-ApPgb
MATAIPGYTYGTDQVAHAPLTMQDLDLLKQAVLFGPEDEQYLRMAGEVLADQIDDVLDLWYGFVGSHPHLVYYFTDGHGNPNADYMAAVRRRFGQWILDTCTRPYDEQWLNYAYEIGLRHHRSKKNIVDGVQAVPHIHYRYMVAFIYPITATIRSFLAKKGHSPEDVDRMYQAWFKSVVMQVALWSVPYIREGDY
>NC_009523.1|WP_011955966.1|1482478_1483099_+|winged-helix-turn-helix-transcriptional-regulator
MTSFDPKHRTTVGGQITIALYRIAQAIDYLLRERGKTMHLSPAQIQTLIFLKYARPGVRTVGGLAQRLGVTYATASGVADALENKRFIERVTLPGDQRVVTLLLTEAGAAQAGQLENVLDEIEAAVDGLPDAEQSVLLHATQAIVARLQQSGYVRVYEMCWGCQFFRRDAHPDDPRGPHHCAFVDAPLAEPATYFECPDFVPSEQG
>NC_009523.1|WP_011955965.1|1479279_1481934_+|hypothetical-protein
MMTRFALVLVLIIGSVCGAMASPTATGAGDDAPVVRPVDNGVWITWRPTVPDPSLPVKPVLVALRAFSDAGVEPRVIALDDAPWSGSPDDVPVAPVVVVRESRLRGERIVALALSPVYRQDGRARAVRTLEVLVEAVAPLETVGESGLAFAQAMASPSSIPPRPPAFPAVPALRVRVEHQGLQILRVSELSPAIAGSPARIKLSRAGTEIPVELRDVNGNSAWGDPDDELRFYAPPPGDRWNRSDTYWLTLEDGARLRIASRATSIPSGEAPSGALERGVVRGTSYYDSRRPGSDGDHWFAALLRAEPGQPEDDQARMSIPVTTTLPAAAGTMTFTVSVHVQSGAVRRLTAAIGSSSSAPVEWNSAGDATLTLVAPGTAGGATEARLTLTAITGYAQVAVDTIEWYRPVLLQFGGKGAIFQGASGQRAYQIAGAPPGFALYDVTDPAAPVRVQITGAAFEDDRAGRSYLLTGDGTIFTPTVEPFTPPALPSGADAVYIAPALLHPALTPLLDLRRAQGYTVAVIDVQTIYDGWSSGQVDPRAIRSFLQHAARTWSPPPMAVTLVGDGSSDPFDYTNRGAKNVNLMPPYLAMVDPWLGETACETCYAQLDGENPTDDRLPDVWLGRLPVKSAAELQTLVAKIIGYETAPTGGAWRGRMLYLADDADSSGDFAAQAEASIALQPPVMQIDRVFFGDGAGQIPTAAAARAAALARFGNGAAVVAYFGHAHQQQWAVTELSAPENWLLHRSDVLQLTNGDRLPVVLSLTCLSSAFQWPSYVGMTIDEALLLSEKGGAVAVWGPTGLGVSYGHDKLQEGFFRTLWSSSAGNDIERAIPLGALTAAGFRELFTGSVCCQETLLTYALLGDPLTRLRVLLTWRVTLPLVQR
>NC_009523.1|WP_011955964.1|1477327_1478290_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITALNLLLRLPELGTINRKEAAAVVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFYQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011955974.1|1492852_1493527_-|nucleoside-monophosphate-kinase
MTAALNIVLLGPPGAGKSTIAEELVHQLPLVPISTGALLRAEIGARTRIGREVAPLLERGDLAPDSLMDRVLRARLETLDPDEGILLDGYPRTMRQALGLAAMLADCDRTLHMVIAIEVSDEEVVRRLGGRRICEGAGEPFPVHIDDLASIMRCRERGGRLVQRDDDRPEIVRQRLIAYHQQTAPLIAYYAGQGLLRRIDGAGAPADVARRALAVIGEELRTGS
>NC_009523.1|WP_011955975.1|1493557_1494244_-|haloacid-dehalogenase
MNAIETVVAAAVAQIEASHTAREQALTLARALTRQCANAIRAVHRREFTEAAALLAEASASARALRESLADHPDLLYAGYSQDALKEYAEAALVYAFLHGDPPPDAASLGVDAAAYLNGLAEAASELRRAILDSMRAGATAHGVALLAIMDDIYSLLITIDYPEAVTGGLRRTTDALRAVLERTRGDVTAAIRQDHLIAALEAFEQRLDRLQAATLPRNTPLEQSDGG
>NC_009523.1|WP_011955976.1|1494461_1496255_+|ATP-binding-cassette-domain-containing-protein
MINRQSRNSRCAVDVIPVRTVDWRRLLHYLHPYRRHMLGALLALAGASAINLGFPLVIVQLLEAVLQQGDQTLLTNLTLALIVLFFVQAFLTFLQGYILNVVGERIVLDMRVQLYRHLHTLSLSFFASQRVGEIVSRISSDVTQVRSILTNNVTQFLSSIVALFGAIIIVFLLNPRLVGFVLALAISVVTVAAVFGRWLQRFSTRVQDELADATVAVEEGLQGVRVVKSYVRESYETGLYERAMQRTLKAALRLALLRSAFGGLMAFLGFSGIAAILWFSGSEVLAGRMSFATISGFLIYAITIGASLAQLSGLYGQFREAVGAVRRVFEILDTQPTIKDAPDARVLPPVHGEIVFDDVSFEYETGQGVLHNIALAIQPGEIVALVGPSGAGKSTLFNLIPRFYDPTSGRVLIDGYDLRDVTQRSLREQIGLVPQETMLFGGTIRENIVYGKLDASGEEIIAAAKAANAHDFIMAMPRGYETLVGERGIKLSGGQRQRIAIARVMLKNPRILLLDEATSSLDSESEALVQEAFERLMRGRTSVIIAHRLSTVSIAHRIVVLNHGRIVEQGTHEELLANQGLYARLYALQFREGVMVG
>NC_009523.1|WP_011955977.1|1496309_1497254_+|Uma2-family-endonuclease
MTTTTPQPVPLTDADADPFRYGWRLVPRPTPDNPHHLEQVPLTLDDVLHPEVGDFIVHSDRHETDRMYLTAVLRARLEPSRRAIVLSDVRIAWDLPDLRAHGPDVMVIPGVRKRRNWSTFEVAVERARPALIIEIVSLDARENDVVIKVEQYARAGVAQYVIVDDTGRGGTRRLRLLDYRLEGTAYRLQAPDADGRVHLAIADVWLGIRRDHVVCYDAAGREIGDYVTVVRQAAKAEARAKQAAVRAKEAAARARQEARAREAEARARVEAEARARQEAEAREAEARARAEAEARLRALRERLRALGIEPDDAL
>NC_009523.1|WP_011955978.1|1497491_1498472_+|deoxyhypusine-synthase
MNSSGPVSQFLRHHFRHFNAAALIDAAEAYRAHLDKGGKMMVTLAGAMSTAELGLSLAEMIRQDKVHAISCTGANLEEDIFNLIAHDFYERVPHYRHLTPEQEQELLERHMNRVTDTCIPEEEAIRRLEGALIEEWTRADQTGESFFPHQFLYRILRSGALKQYYQIDPRDSWVYAAMERDLPIYVPGWEDSTTGNIYAAHCIAGDIKNVHTVRGGIEYMIDLADWYTRTSARHSIGFFQIGGGIAGDFPICVVPMLHQDLRRTDVPVWGYFCQISDSTTSYGSYSGAVPNEKITWGKLAVDTPKFIIESDATIVAPLIFALVLGW
>NC_009523.1|WP_085979421.1|1499935_1500993_-|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_041333156.1|1502979_1503345_+|winged-helix-turn-helix-transcriptional-regulator
MPHHDSLERERGTRCCADLVAPRFSPAEAQRLSEDLQILGHPVRLLILDVLTRHSGQVCVCDLEAAVPVKQPTVSHHLRLLREAGLVEAERHGPWMYYFICRDALAALRTRMMRVLAVLEE
>NC_009523.1|WP_011955981.1|1503434_1504283_+|arsenite-methyltransferase
MSYKQASSETIKEQVRRHYAERIQSGSCCGSPSGGGGDAVPTEIALYGEEVIAALPSGVVTTSFGCGNPVALASLREGEIVLDLGSGGGLDALLAAQRVGVGGYVYGVDMTDNMLAVARRNAEKAGVANVEFLKGDIENIPLPANIIDVIISNCVINLTPDKSQALHEAFRVLKPGGRLAVSDIVIDGDLTGFPVTEEQIRAALDWTGCIAGALTIDEYRALLTEAGFTDIAITVQHRSTIDDVGAMLAGAPGDLNALPPEMVQGLVDCFTSSMIEARKPGE
>NC_009523.1|WP_011955982.1|1504349_1505648_-|organoarsenical-effux-MFS-transporter-ArsJ
MATADIAAPRTASGDLRNYILVTGAYWADTITDGALRMLVLFYFYQLGYSPFQVAMLFLFYEIFGVITNLFGGYLAARMGLKSTLFSGLGVQFIALSMLALPDAVWLTVPYVMAAQALSGIAKDLTKMSSKSAIKLIVAEDAQSTLFKWVAILTGSKNALKGVGFFVGGLLLFLVGFRTAIFILAGLVITALVVTAILMRGDLGKADKKAKFRQMFSHNRAVNILAAARVFLFASRDVWFVVGLPVFLYTVLGWNFWQVGGFLAIWVIGYGFVQASAPEVIKRRMQVDEAGIAHGSVPDGQTAMWLAFVLAAFPAGIAVALAGGIEPTLVVVAGLIAFGIIFAMNSSVHSYLILAYTESDKAAMGVGFYYMANAMGRLAGTVLSGAVYQIWGLVGCLWFAVAFVLAAGIISVALPRREAGAPVVAAFGDGGD
>NC_009523.1|WP_011955983.1|1505772_1506783_-|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase
MPVRIGINGFGRIGRLALRAMWGWTDITVAHINEIGGPVETAAHLLEFDSVHGRWQRDIQTENGQLIIDGIPIGYSSIKDPGAVPWRAAGVDIVLEATGKFRTRETLQPYFNAGVRKVIVAAPVKDGALNVVMGVNDHWYNPNEHHLLTAASCTTNCLAPVVKVIHEGIGIVHGMITTIHDATNTQSILDTPHKDLRRARATGLSLIPTTTGSATAIGLIFPELQGKLDGIAVRVPLFNASLTDCVFEVRRPTTITEVNALLRAAAEGPLAGILGYEHRPLVSVDFKDDPRSAIIDGPSTMVTNGTQVKIFAWYDNEWGYANRYVELARKVALALE

Crispr_ID: NC_009523_24

• CRISPR_ID: NC_009523_24
• CRISPR_location: 1517439-1517521
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_24

Consensus_repeat	Method
ATGACTTCACTGCAAACGCGCACCGC	CRISPRCasFinder

spacers of NC_009523_24

>24.1|1517465|31|NC_009523|CRISPRCasFinder
TAAGACGCCGGGGGCGCGGAGATTTCCATCG

CRISPR arrays and Neighbor proteins around NC_009523_24

CRISPR arrays

The CRISPR arrays of NC_009523_24

>merge|NC_009523|24|1517439-1517521|CRISPRCasFinder
ATGACTTCACTGCAAACGCGCACCGCTAAGACGCCGGGGGCGCGGAGATTTCCATCGATGACTTCACTGCAAACACGCACCGC

>NC_009523|24|21|1517439-1517521|CRISPRCasFinder
ATGACTTCACTGCAAACGCGCACCGC	TAAGACGCCGGGGGCGCGGAGATTTCCATCG
ATGACTTCACTGCAAACACGCACCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_083763264.1|1526737_1529314_+|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NC_009523.1|WP_011955996.1|1519536_1520043_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956001.1|1526423_1526768_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011955999.1|1523610_1524153_+|XamI-family-restriction-endonuclease	unknown	unknown	gnl|CDD|312917
NC_009523.1|WP_011955985.1|1507609_1508374_-|metalloregulator-ArsR/SmtB-family-transcription-factor	unknown	unknown	gnl|CDD|319973
NC_009523.1|WP_011955992.1|1514657_1515803_+|anti-sigma-factor	unknown	unknown	gnl|CDD|227949
NC_009523.1|WP_157040988.1|1509324_1510641_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_041333159.1|1515960_1516323_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333161.1|1520205_1522794_-|primosomal-protein-N'	unknown	unknown	gnl|CDD|235514
NC_009523.1|WP_157040989.1|1514022_1514661_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236602
NC_009523.1|WP_083763358.1|1517581_1518619_+|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224995
NC_009523.1|WP_011956003.1|1529344_1530718_-|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|274908
NC_009523.1|WP_011955990.1|1511955_1513935_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223562
NC_009523.1|WP_011955984.1|1506811_1507588_-|protein-tyrosine-phosphatase	unknown	unknown	gnl|CDD|319973
NC_009523.1|WP_011955986.1|1508464_1509301_-|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|366542
NC_009523.1|WP_011955995.1|1518615_1519530_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|132489
NC_009523.1|WP_011955993.1|1516416_1517349_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009523.1|WP_011955998.1|1523433_1523607_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956000.1|1524158_1525763_+|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl|CDD|223363
NC_009523.1|WP_011955989.1|1511396_1511891_-|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl|CDD|198388

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_083763264.1|1526737_1529314_+|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.36291e-12
NC_009523.1|WP_041333161.1|1520205_1522794_-|primosomal-protein-N'	gnl|CDD|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NC_009523.1|WP_011955999.1|1523610_1524153_+|XamI-family-restriction-endonuclease	gnl|CDD|312917	pfam09572, RE_XamI, XamI restriction endonuclease. This family includes the XamI (recognizes GTCGAC but cleavage site unknown) restriction endonuclease.	6.54784e-44
NC_009523.1|WP_011955985.1|1507609_1508374_-|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl|CDD|319973	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family. Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).	2.00613e-62
NC_009523.1|WP_011955992.1|1514657_1515803_+|anti-sigma-factor	gnl|CDD|227949	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription].	0.000761739
NC_009523.1|WP_157040988.1|1509324_1510641_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.68448e-35
NC_009523.1|WP_157040989.1|1514022_1514661_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236602	PRK09639, PRK09639, RNA polymerase sigma factor SigX; Provisional.	1.94985e-38
NC_009523.1|WP_083763358.1|1517581_1518619_+|NAD(P)-dependent-oxidoreductase	gnl|CDD|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	4.24556e-77
NC_009523.1|WP_011956003.1|1529344_1530718_-|NTP-transferase-domain-containing-protein	gnl|CDD|274908	TIGR03992, Arch_glmU, UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. The MJ_1101 protein from Methanococcus jannaschii has been characterized as the GlmU enzyme catalyzing the final two steps of UDP-GlcNAc biosynthesis. Many of the genes identified by this model are in proximity to the GlmS and GlmM genes and are also presumed to be GlmU. However, some archaeal genomes contain multiple closely-related homologs from this family and it is not clear what the substrate specificity is for each of them.	1.35152e-48
NC_009523.1|WP_011955990.1|1511955_1513935_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl|CDD|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NC_009523.1|WP_011955984.1|1506811_1507588_-|protein-tyrosine-phosphatase	gnl|CDD|319973	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family. Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).	1.81252e-67
NC_009523.1|WP_011955986.1|1508464_1509301_-|sugar-phosphate-isomerase/epimerase	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	1.6454e-09
NC_009523.1|WP_011955995.1|1518615_1519530_+|GNAT-family-N-acetyltransferase	gnl|CDD|132489	TIGR03448, mycothiol_MshD, mycothiol synthase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.11144e-10
NC_009523.1|WP_011955993.1|1516416_1517349_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.68437e-89
NC_009523.1|WP_011956000.1|1524158_1525763_+|SAM-dependent-DNA-methyltransferase	gnl|CDD|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	4.41615e-08
NC_009523.1|WP_011955989.1|1511396_1511891_-|GIY-YIG-nuclease-family-protein	gnl|CDD|198388	cd10441, GIY-YIG_COG1833, GIY-YIG domain of hypothetical proteins from archaea and their bacterial homologs. This family includes a group of functionally uncharacterized hypothetical proteins from archaea and their bacterial homologs. These proteins contain a putative GIY-YIG domain that shows sequence homology with bacterial UvrC DNA repair proteins. Meanwhile, all of them share a C-terminal extension with semi-conserved Cys and His residues, which suggests that the extended region may be a zinc-binding nucleic acid interaction domain. Although the majority of family members have a standalone GIY-YIG domain composition, some of them do have additional endonulcease III domain or sugar fermentation stimulation protein domain, both of which are N-terminally fused to the GIY-YIG domain. As a result, those proteins could perform some other role by cooperating with different domains, which remains to be determined in the future.	3.05082e-47

Protein sequences

>NC_009523.1|WP_011955993.1|1516416_1517349_+|ABC-transporter-ATP-binding-protein
MPDYVIETSGLRKVYGAKVAVADLTLQVPRGEVFAFLGPNGAGKSTAVKMLLGLVKPTSGTAQVLGAAPADPRAMARIGFLPEHFRFHEWLQAAEFLDLHARLSGMSADARRRRIPDVLALVGLSEHARRPLADFSKGMLQRIGLAQALIHDPELVFLDEPTSALDPFGRMLVRGIIRDLRARGTTVFLNSHLLGEVEMTCDRAAFIRAGRVLRTLNLHESAAGRVRVALRVAGASNGLIESLSVFCADGQAPHETSPGIIELEVASEDVLPQIAERIIASGARLYALTPQRVSLEQLFLDIVGRDDSGQ
>NC_009523.1|WP_041333159.1|1515960_1516323_+|hypothetical-protein
MRAGRARTQAGRARTQAGRAPDTVMRAGRARTQAGRARTHGAPDTVMRAGRPRTHGAPDAVMRARRAHPGETPAHPGRAPDAVMRARRARTQDAPDTVMQARRARTQARRARTQDARLMR
>NC_009523.1|WP_011955992.1|1514657_1515803_+|anti-sigma-factor
MTGCYDDGALRAGLDGELPAEALRAQQAHLAVCAACRARRAELHALADQTTLLLHSLPPDVPAALAAVRQQIDRERPASAGGRSLYRQSSQRSISMTSTRVWRPWMGWAAALAVVVALLALPPVRAAADQLLNIFRVQNVVFVPVSRERMEQLQQLNFDGETLFVTPPQQTSGSREMRRVASLDEAAALVGFTPAQPGLSRPITQTEFAVSDRATFEFQVNVESARELLRLAGVNDVVLPDALGAAPIVAAMSPAVTARYAGDGYEVMLVQGVSPQVTLPDGVEMQQLGYAALRMLGMDARQAATLAAQIDWRTTLVFPFPADINSLRQVSVGGAPGLLVSGEYDGERYQSLYWQRGERFYVLSGRGLSTDAFLAAAESVR
>NC_009523.1|WP_157040989.1|1514022_1514661_+|sigma-70-family-RNA-polymerase-sigma-factor
MIITNCNVRNMAVRAGDRHMAEHESDQTLLERLRRGDESAFDNLFVRHYAVVYRVVYGLTGTREAAEDAAQETFLALYRRPPAPDQPLRPWLCRVALNTARNALRAERRDTLRVERAALDVVAAGEPSEAVERAEERDRVRAALATLPQRQARLLLLRHAGLSYAEVAAALDLAPGSVGTLLARAERAFAEAYARCISTGAADRSVGKQVQS
>NC_009523.1|WP_011955990.1|1511955_1513935_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSIITVSGLTKYYGAELVFRDVSFQIARGDKAAIVGVNGAGKSTLLRIIAGQESATGGSVHLARGTRLAYLAQEARFATQRTLLEEMHASLDYLNALRNEITALETALTDVHHPDHDRLMARYGEVLHRFEHAGGYHIDRRIDMILSGLGFTAAQRHEPVARFSGGQKTRAALAAALLSDPDVLLLDEPTNHLDLAALEWLERFLRDWDGTLIVVSHDRYFLDRVTTRTLDLAFNRLDGDYPAPYQRYLELKAARLELQLKQYRAQQEEIARTEDFIRRFKNSQLSRQARGRERRLERLKEGWQGSSGRTEGLIARPDQQKKIAFKLNATTRGADLVLKIEGLTVGYAHPHNGQNDAGHVELLRIPDLEIWRGQRVALMGPNGCGKTTLLRTIVGELPPLSGRVRPGNNVRLTYYAQAHEGLRMDQTVLDEIRRIRPEMKEAEARTLLGRFLFSGDDVYKRIADLSGGERGRVALAQLMVLGGNLLVLDEPTNHLDIDAREALETVLNEYDGTVLFVSHDRYFVDAIADTIWMAHDGAIEVFDGTYSGYRAAHDAAAPTSVSQPVRPRASASESHPESTDTRATTREQERNERRRQRRLAALEEEIASLEAKLRHLEEALQTASIAGDVSRVTALGIEMVELQETLNVRYDEWAAIADE
>NC_009523.1|WP_011955989.1|1511396_1511891_-|GIY-YIG-nuclease-family-protein
MPARGTYLLILRLDRDVVGLPVGKLGALDFPAGYYLYIGSAFGSGGLPARLAYHAKRRKTRRHWHIDYLREHGELEEAWIIACPVRLEHAWVSALSAAPDVQPVAPGFGASDSPCTSHLFFSPVRPSSHTLAETLFQGIEKVSDCITHLSIEVHTFHDRQLTPA
>NC_009523.1|WP_157040988.1|1509324_1510641_-|glycosyltransferase
MPLCAPTSPPSGLPASECENHVPTAMPDIITIVVPWFGPDTAGGAETQARQLAAALHALGAPVEVWSTNGRDSFSPPVPHYRTGADVVDGVPVRRFPITPPRPAPHEPYVPPAVQRIGQPADWNSFPDHERRLLASLVSSDALLDAITAERDKRRFLFIPYPFPTTFWGTVLAGERGYLIPCLHDEPYARYTTYRWMFRHTRRVLANSPAERALALRLYNLPPDRVVTAGEGIDLTPRGDGAAFRRRHGLRGAVLRYAGRRDASKNFPMLLMYLREYWARRGTPLTLVLTGRDPVEIPAPLRPIVLDLGDVDIQERHDAYAAADVFIQPSTYESFSIVLMESWLQGAPALVNAHCDVTREAVEASGGGLSFDGFAGFAAALDLLLENRALRRALGARGRAWVLENCRWDDVARRTVAAIFEHEVPTSTTPPSRTLHIP
>NC_009523.1|WP_011955986.1|1508464_1509301_-|sugar-phosphate-isomerase/epimerase
MNQIEQPIAIGINARLFPINWRPATEEIAFAQRLGCACIQIHGRERGIDATYLGASPQAIGEILARHTMHAVMEIVVRLLPHGRTQSGATPLDVLSANLPAINALAIRHVHWHFAPAVLLSRDELRALEDMLIDHLRAGVNLARTHGFTLALEHNEPDVPLFADIGSITTALEAVPDLGFVWDLNHTPPDELGDWIDLAPRMTLLHVSDTPLPAVNHHLPLGQGSIDFAARFRDLTARGYHGAAILEIGGVPKSGGFGRDTDEALIDSVARLKTALSV
>NC_009523.1|WP_011955985.1|1507609_1508374_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MTDINHHHPSAPPMPEALRLLSDETRWRLIGELRWSDRQVGELCERLDLPQNLVSYHLGILRQARLVRTHRSDADGRVLYYALDLAALQQQWQSVGSALALGHTAPPAVIIGPVLFVCTHNSARSQIAEAWLRHLSGGRVIARSAGTFPATVQPLAVQVMAEAGIDIGYQQAKGLADVAAPAPAIVVTVCDLAREECAATLHAPFQLHWSIPDPVMASGGEAERLAAFRAARDELRMRVAGLLDLLSVVSINTN
>NC_009523.1|WP_011955984.1|1506811_1507588_-|protein-tyrosine-phosphatase
MNATLNEAAAFFRMLGDATRLAVVARLARSDERLIGLSTAIKQPPETVAAALADLQSAGLVASRASDVHPGEMYYHLDLEQMQQRYLTAGRLIHPALAQAITGVEEEMVQRAKPRVLFLCTHNSARSQMAEGLLRTFSHGTIEAFSAGSQPDEVHPLAIETMDGMNVDIRNQRSKHFNEFLGQHFDVVITVCDRARETCPVFPEAKEIIHWSIPDPAAVEDEAEKRRAFHQAATILATRIRYLQILLEREQREQAVMR
>NC_009523.1|WP_083763358.1|1517581_1518619_+|NAD(P)-dependent-oxidoreductase
MRVRDSLWNPPLRTLRRCGEIPFLQQTHTWYDMHGLPYHHEGSMERLGFIGLGRMGQVMAGRLLAAGFPLTVHNRTRARAEALLAGGAAWAETPAEVTARSDLVFTILTDDHAVETVYCGRDGLLSTDASGRLFIEMSTIRTSTILSLAGMVDQRGARLLDAPVSGTVAPAREGQLLVLVGGRTSDLERARPALGVLGRRIIHLGGQGAGTTMKLVLNMTMACFWGALAESLAVGQQFGLNIETMLDVYLDSAVAPPALRSKTPALLGETSEVAFDVTGVRKDLLAMVATAQDAGVPAPVASAALAHFAAATAAGYGERDLAAVVEYLAEVARRTARTAFTLGEP
>NC_009523.1|WP_011955995.1|1518615_1519530_+|GNAT-family-N-acetyltransferase
MIITIRPFTGAADIERMIDLAYAFPDQCLRAVDLPYRLASWTLDNPRNASLWEDEAGRLLGFAVIQLPWHSLDTCAHPAAYEAGIEELMLVWATERAQEIADQTRRDLTVYVDVFEEDLDRRAKLAAHGFAPDCPAMIRMSRSLDRVLPMPFLPEGFTLRPIDGMRELHEYVALHRAAFGAADMTVEWRKRTLCMPQYIPELDVVAVAPDGRLAAFCICWLGPRIGEGYIEPLGVHPDFAGLGLGRAVLLEGLWRLQAHGAMTALIDRYEGDEGARVLYESLGFRTHMRTVTYMRCFRGARSMV
>NC_009523.1|WP_011955996.1|1519536_1520043_+|hypothetical-protein
MNDSLVLTGEYIELRPLPERDLPNLLKVYQGTPLYFDGLGDRADRLTLDDVRDQWVRAQQSPDRMLFGVYHPVTGLLIGAVDVQIGAPRSDAAAVWILIWGGFQRQGYGQECMALIESWLIPAKASTLCAIAANNEEGISFLELQGFRRTDLPADPPIGRGTAFWMCW
>NC_009523.1|WP_041333161.1|1520205_1522794_-|primosomal-protein-N'
MTAELLADVALSANAVFTYRVPPSLRPLLRVGHLVWAPLRQRHVQGVVLDLYAWGGSPHDPAVALSPPALRADPADWFDPQTPTLRDVIDIADPDIALTPAQIRLAHWIADYYRVSLYEALTLMTPPGIAREAETTWRATVEGHSVNPGALPPGERDVLYLLRRSGEMTERELRKRLRGSDAELQAIYTALRERGLIARGATLARARARPRTERLVRLALPPDEAHTALEGLARAPRQRDLLAYLIDHPDPIPVPDLLTAANADSGTLRALERRGLIDIIARDVWRDPLALLDVPPDTPPTLSLAQQKAWDAIAGALDWCTNATEDRAAPAQTHFLLHGVTGSGKTELYLRAIARALRLGRQALVLTPEIALTTQMVRRFAARFPGQLAVLHSELSIGERYDQWRRLRRGDAGIAIGSRSAVFAPLPNLGLIIVDEEHEPSYKHDAAPRYHARDVAQRLATITGSVLILGSATPSVESYAAARAGHLRLLELPERITTATGPDGLPHIRTLPLPHVTVVDMRRELAENNRSIFSRALQAALAETLKRGDQAILFLNRRGSASFFLCRDCGHAMTCPSCSSPLTLHQEAGDGQAASSGGMLICHTCNHRELPPALCPHCWSARIKSFGVGTQRVVDEITTLFPRTRTLRWDRDSVTRKGDHDRLLDRFLRHEADVLVGTQMIAKGLDLPMVRMVGVVAADTGLYLPDFRAGERAFQLLTQVAGRAGRREAGAHVIIQTYAPEHYAIRAAQEHDYHAFYEQEIAFRRQTGYPPFARLVRFVYGAGSDARARRAAEALANDIRSLAVRHLADDWSLVGPAPAFFRVQRNRYRWHLILRALDPTPLIQALRIPPGWIVDIDPVHVL
>NC_009523.1|WP_011955998.1|1523433_1523607_+|hypothetical-protein
MTHEQSIAIDIPADEAATLLPLLQQGGFTTQPIQQRDLDWQTIVVVIRDATVMPARM
>NC_009523.1|WP_011955999.1|1523610_1524153_+|XamI-family-restriction-endonuclease
MSAVTVNADKPDRWKADIAASVDYFNRWFIAFAPQTFRSTRVTTTEHVKRALHVTDDLRRLDVTTLRSNPGILPTLRMCTAPPLAVDRLVGLAGVSKNLIERMEQGNLPGKTTSADLDRALTKICDILSQLLDRDIFPWLVNGTALDDRERDRSATIIADRLCSAVANPIIRNAQEQLGL
>NC_009523.1|WP_011956000.1|1524158_1525763_+|SAM-dependent-DNA-methyltransferase
MPANDANLVELQRQALQVAFDARTSTAERNRCGQFATPYPVAVEIARYVSHIARDRLPTIRFADPALGSGGFFSAALAVFGAERITSAVGVEIDPALCDVARTLWDSSGLEVVHGDFTRIVDRFHRSGAPNLILANPPYVRHHHLSFEEKELLRALTLRMTGVNVHGLAGLYVYFVLLATAWMADDGYAAWLIPSEFMDVNYGAALKRYLTDHVTLIRVHRFDPADVQFGDALVSSTVLVFQKTPPPPAHTVEFTFGGTLLSPLVSDRIALQQLRDSRKWTVYPRHPRNDRCLSSAGDDVTLGDLFRIRRGIATGNNRFFILERREAERRGFPHGCLRPILPAPRFLKTTVVEADQDGYPLIEPQLCVIDCDLPEPALRVQFPTLWEYLQTAETPGIRHGYLIDRRTPWYRQEQRDPAPFLCTYMGRGVGMQRPFRFIWNQSRAIATNLYLMLYPKGGLARLLQQRPDAAADVFALLSQVTGDELRGEGRVYGGGLHKIEPGELARISASAFIDRWPELRATSHRQHALFEDVG
>NC_009523.1|WP_011956001.1|1526423_1526768_+|hypothetical-protein
MTHEQSIAIDIPADEADALLPLLQQGGFTTQPIQQRDLDWQTIVVVITDLGKIAGGLTALITLAEKINAYRESMHRQGKTPRGALRRPGQPPLDLSLATDQEVLEWLLKTPPQP
>NC_009523.1|WP_083763264.1|1526737_1529314_+|CHAT-domain-containing-protein
MAAQDAAATVMPVRMSLLFSAPLVMKRGEETAPITLLPVQQEIETLVNTCRGLGVALEIETAIATTERIGYLFATTRQPFDVLHFSGHGSRHLDGASVLALEDETGIVRDLDAVELRRLIGNQPCRLAFLSACHSAGLADALIAAGVRHVVAINAADPVIDLAARVFAVRFYAALFAGRSVAEAFAAGRTAVATNDELRQWSDPETLQTLNMQEEVKFRLLREDDPVHQQPLVPAPPSGQLTFRRPPWQNTNLSPVAADPFVGRARELHAIAQALRNNRCVAIHGMGGMGKTALAEAAARWQHERNRWRDGVWRVALRNITTAYEARSRIAFVLGLAPETAESDATLAGALADRQSLLVLDDLDALLLHDRQGLVGMMRALLGTRFLKLLTTARLDLPGRIHHAPLELTCLTGADAQTAFLTYAPPIEKWGEWTPDEWRDLLRFLDGYPFPIRLAATAMRAARLSLRDLWCRLQANPQGTLRYPNDDEDRETSLAATLDLSYNVLPAAAQRAFALLSLFPAGLTRNAAQAIADIEAETLETVVHYGMAEWRGTADYAQCALPEPARRYAEARLAQQMPDALATYAPAALAYFAGLIEAADEAIIKGNERSGITILTLEQPNLERYLDWGYEQDTGNSGINWAARATARLRNYWNLTGERGRLEVLARLKRALDSARRSSDTTGEANVLQAIGDVQQFRKEVDAALRSYDEALRLYRALGARLGEANVLQAIGDVQQFRKEVDAALRSYDEALRLYRALGARLGEANVLAALSRLRIDDDVAASQQLLEQALALRRAIRSVYDEGVDLGNYGIALLQRGRGAEALPYLQRARAVFAAHGLTAQIAWMDWWIGQASGDGG
>NC_009523.1|WP_011956003.1|1529344_1530718_-|NTP-transferase-domain-containing-protein
MIQTAILLAAGAGTRFWPYNVVRNKCAFPIANVPAVRRLSDDLAALGITRQVVVVGAGEASVRAALRGASADIAFVRQAHPDGTAAAAFLGAAGIDGDILVVAADSVTDRANLAALRERFERDRPLAAALTQPLGAESSLDWLIAYVDDGELRGVEGHSRDGDRRFCGVYAFRPEALAFLRDNPALMRVGVGGMPPVETEIAQSLQMMVDEGETVAVIDAPGFHVDLDKPWHILEANGRVIGAMAAALEGHQIDPTARVHDGADIGGRLVLGPGAVIGNRVVVDGDLWLGAGAKALNGAIVQGHAVIGQGTVVRDYCQIGGGSSLGARGVYGHGAEFSGVALDTVYCYHYCEIWGVVGQAVDFGAATVCGNLRFDDRDTVWRIKGRPEIPTTAANAAYFGDFCRTGVNAIIMPGRRLGVYSICGPGVILHDDLPDRTMIMVAQQVTTRPWGPERYGW

Crispr_ID: NC_009523_25

• CRISPR_ID: NC_009523_25
• CRISPR_location: 1548242-1548314
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NC_009523_25

Consensus_repeat	Method
GCTGCGTCCCAGGGTGCTGCGTCC	CRISPRCasFinder

spacers of NC_009523_25

>25.1|1548266|25|NC_009523|CRISPRCasFinder
GTGCAGCGCTGGTGCGTCCCAGGGT

CRISPR arrays and Neighbor proteins around NC_009523_25

CRISPR arrays

The CRISPR arrays of NC_009523_25

>merge|NC_009523|25|1548242-1548314|CRISPRCasFinder
GCTGCGTCCCAGGGTGCTGCGTCCGTGCAGCGCTGGTGCGTCCCAGGGTGCTGCGTCCCAGGGTGCTGCGTCC

>NC_009523|25|22|1548242-1548314|CRISPRCasFinder
GCTGCGTCCCAGGGTGCTGCGTCC	GTGCAGCGCTGGTGCGTCCCAGGGT
GCTGCGTCCCAGGGTGCTGCGTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|214621
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|376518
NC_009523.1|WP_011956007.1|1534643_1536866_+|cell-shape-determining-protein	unknown	unknown	gnl|CDD|238050
NC_009523.1|WP_011956009.1|1538627_1539437_+|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl|CDD|234710
NC_009523.1|WP_011956011.1|1539972_1541391_+|amidase	unknown	unknown	gnl|CDD|236028
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	unknown	unknown	gnl|CDD|224033
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	unknown	unknown	gnl|CDD|379721
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	unknown	unknown	gnl|CDD|214807
NC_009523.1|WP_011956012.1|1541490_1543293_-|oligoendopeptidase-F	unknown	unknown	gnl|CDD|341071
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	unknown	unknown	gnl|CDD|238703
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224046
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009523.1|WP_011956010.1|1539433_1539952_+|DUF4190-domain-containing-protein	unknown	unknown	gnl|CDD|379388
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	unknown	unknown	gnl|CDD|234777
NC_009523.1|WP_011956008.1|1537080_1538532_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|223864

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	1.7e-71	236.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	gnl|CDD|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	6.56682e-06
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	gnl|CDD|376518	pfam01297, ZnuA, Zinc-uptake complex component A periplasmic. ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host.	7.25074e-70
NC_009523.1|WP_011956007.1|1534643_1536866_+|cell-shape-determining-protein	gnl|CDD|238050	cd00102, IPT, Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.	5.66271e-06
NC_009523.1|WP_011956009.1|1538627_1539437_+|indole-3-glycerol-phosphate-synthase-TrpC	gnl|CDD|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	3.52443e-136
NC_009523.1|WP_011956011.1|1539972_1541391_+|amidase	gnl|CDD|236028	PRK07486, PRK07486, amidase; Provisional.	0
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	gnl|CDD|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	4.51948e-71
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.29634e-44
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	gnl|CDD|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	4.46398e-05
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	gnl|CDD|214807	smart00758, PA14, domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.	6.19356e-18
NC_009523.1|WP_011956012.1|1541490_1543293_-|oligoendopeptidase-F	gnl|CDD|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.7755e-59
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	gnl|CDD|238703	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. .	2.79067e-92
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	4.53581e-13
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	2.69568e-105
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.53089e-16
NC_009523.1|WP_011956010.1|1539433_1539952_+|DUF4190-domain-containing-protein	gnl|CDD|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	3.61815e-10
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	1.17761e-111
NC_009523.1|WP_011956008.1|1537080_1538532_+|PDZ-domain-containing-protein	gnl|CDD|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.80831e-61

Protein sequences

>NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein
MAQSPTPTAPVLHNRYRIDERLGATRLAVVYRAYDERLQRRVLVAMLRKELIDQEPLRRRFVTEAQFGARHLHPSLLHVYDSGEVAGRPFMVTEYVSGRTLREFGPLTVEVALLYFRQIVGAVAACQAAGAPHPPISSANVVLVNEGHVELIENWSMTPAESGLDVAAYRAPERASGQPPTASSVVYSLGLLLIEMLTGRRVVEGADLDGILQAQRNLALPTLSALRSHIYLPSLARLLARATAPDPLQRFPDALALSQALDEVWRSVSRDTDRLASPKHPDPVGERASAAAPHLNIRPAPSAPVPSPSPAAPVTTIDTNQLMLQSARRRSLAALIAMVALFVLVGSGAYVLTSLALEGLTSIRLPRPQVSLPEGITLPDWLTGVADGSGEVLIVTIGDVEGLNLRAEPGLNTRIIGLLPNGTRVRKLEGPRTVDNVPWVRVRGEINGQPVEGWVSQLFVRTG
>NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein
MLTRFFALMIIVVLALSACGGAQPAPSGGASPTVAPAAPTVAPAAPTVAPTTPPVAMAPALNVLAVQSFLADIAQNVAGDRLKVEALIPLGVDPHIFEPTPADVRKVADSDVLIINGAGFEEFLASLLENAGGERLVIEASKGLSSRTAREGEVAVMSPEELTDALCVEAADLFLAAEEITAGAERASAVELGAHAEKEADHGHDHDHEHAHDHGGMFWQVMLNRQADGTYAGFLKWDAEGGEIAIATGDGALVVTGIDTGAALDAEETLTLNCSGLTQAMIMDVEKGEYLLALTGFRAPQATLMIGTPGGHHHHDEGDPHFWLDPMNVVTYVANIRDGLISVDPAGAEVYRANAERYIAQLNELDRFIASEVAAIPEANRKLVTNHESFGYFADRYGFRIIGTIVPGVTTGASPSAQQLARLTERVRDAGVKVIFLETGANPQLAEQLARETGITIVSDLYTHSLSEADGPAPTYIDMMRYNVKRIVEALKQG
>NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein
MNTPHIEQEPAHLEIERLTVAYGRRRVLDDISFRVEYGERVVLVGPNGAGKSTLFKALVGLVKPQSGTIRIHGLPPGAHTDCVAYVPQREDVDWRFPVTVADVVMMGRFGRLGWLRRPTRADHAAVERGMELMGVAHLARRPIGELSGGQQQRVFLARALAQEPHILLLDEPFTGVDAATQEATLSVLDALSDQKVTIILSTHDLGLAAARFERVLLINRRLIGDGPPVRVLSRGPLAEAFGGQVLTLPDGSVLVDQCACHQSEPESIVVK
>NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease
MNTLWSWIVAPLAYGFMQRGMLAAVLVGILCAIIGCYVVLRSMAFLGDALAHAVLPGVAIAYLMGANLLMGALAAAVVVALLISLFSRQGTIKEDTAIGIVFAAALALGVALISSVRTYAVDLTHIMFGNVLGVSPTDVWLIAGIGAAVLLTVLAFYRQFLVIAFDPVLAATQRLPVERLRMLLLLLIALTIVVSLQTVGVGLVAAMLVTPGATAYLLTRRLPAMMMVAALIGAVASISGLYLSYYVNIASGAAVVLVATALFTAVFLFAPERGVVWRRG
>NC_009523.1|WP_011956012.1|1541490_1543293_-|oligoendopeptidase-F
MTETQKVPRRDEIPEHYRWDLTTIYVDDAAWEQDVATIEQMLSDVAAVQGRVAGSPDDLLAALRLRDQVSMRLWQIYVYANRRFDSDTTDPVGQALAERAGTLAAKVGAALAFIEPEILAAPEDQIRAWIREYPDLAVYEYALDQLLRQRAHVRSAEVEAILAQFSDITRAPGEIFEVLTNADLHFPSIEDEQGQPVQLSHGRFLRFLRSPDRRVRRDAFVGYYSAFQGIRNTLGASLAAQVRTHVLNAKVRNYASSLEAALTPNDIPVEVYHNLIATVNASLPRLHRYFQARRKIMGLDELHFYDLYAPLVPEADVAVPYEEAERMVRAAFEPLGDEYGAAVAQAFRSRWIDVYENIGKRSGAYSDGSYTTAPFMLLNYQERLNDVFTLAHELGHAMHSYFTRKTQPYIYGDYTIFVAEVASTLNEALLTDHLLRTRDDPILRRYLIVEQLEDIRTTLFRQTMFAEFELEIHRRAETGEPLTTELFSTIYRDLVARYHGSEVALDEQIALEWARIPHFYYNFYVYQYATGLSAALALHKRIVQEGSPAIERYLHFLRSGSSRPSIELLRDAGVDMLSPAPIQAAMDHFSALLDELERMT
>NC_009523.1|WP_011956011.1|1539972_1541391_+|amidase
MDNTAELCFLTAIELTQRIRARSISCVEVMEAHLRQIERVNPQVNAIVTLAPEQALAQARAADAALRRSDAVGPLHGLPVAHKDLVQTKGMRTTFGSPIYADFVPDVDDLIVTRIRNAGAILIGKTNTPEFGAGSQTFNPVFGATRNPYDLSKTCGGSSGGAAVALACGMLPIADGSDTGGSLRNPASFCNVVGFRPSPGRVPSCSDRAAWQTLSVPGPMARTVADAALLLSAMAGPHPCSPIALQKPGAHFRQPLDRDFHGVRVAWSRTASGLPIDPEVTAVLEQARPVLEAIGCIVEETEPDFTGADEAFKVWRAWGYEQKLGELADTHRDRLKETILWEIEQGRALTGPQIGRAERLRTALYHRMRRFMQTYEFLALPVVQVPPFPIEQPYVTEINGVPMDTYIDWMRSCYYISITGFPAISVPAGFTRDGLPVGLQLVGRHHNDFGVLQLAHAFEQATGHWRRRPPIV
>NC_009523.1|WP_011956010.1|1539433_1539952_+|DUF4190-domain-containing-protein
MRCPSCDGVIEESDVQFCPFCGMQIRASQASDPDRRAHATTDAPGSSRRSQLHPLLEILKKDRRYSWIVSEQPISPAANLSLIFALLGVFSCVPLVFSILAIVVGYRALDEIAASDGRLGGRGRAIASIIMGCIQLALLILGFILVAVSSWLQKQPADLPSAQAVFLIALLA
>NC_009523.1|WP_011956009.1|1538627_1539437_+|indole-3-glycerol-phosphate-synthase-TrpC
MDTILNRILTHKRVEVERQRIKIPDAQIRARAEAAPPPRDFAAALRAHRPIALIAEVKKASPSKGVLIENFDPLALAHTYASNGASAISVLTDVRFFQGSLKHLEGIRAMVDRGAVPPLPLLRKDFIIDPYQVAEARAYGADALLLIVAALDDETLAALLALTHSFGMQALVEVHNEDELRRALDAGASIIGVNNRDLHSFTTTLETTRRLAALLPSSNRPLLVSESGIFTAEHVALVRSWGADAILVGEALVTAPDISSKVRELGGGS
>NC_009523.1|WP_011956008.1|1537080_1538532_+|PDZ-domain-containing-protein
MKIRFRSTLIALIAGVLAGCGAFPVALRPDPTAPVVPLSTPTELPAATSTATPPLPTATPTPTHTPTPIPTPTVTPYPLLPTPTLAPLTASMRQEIFNDVWTLVRDRYVYEDYGGIDWDAVREEFEPLIARAASEEEFYALIEQMVARLGDDHTRFDTPQEVAEEAARFDGGVAYAGIGAMIRELPEGILITRLAPNSPAEQAGLQPRDLIVAVNGVPVSDTVTFGPGGPITVVRGQPGTPVQLRVRSSAGAVREVTVIRQVIPPDAFPIVEARRLPGTDVGVVLIDTFNISALDERVTDAIMSLFRSGPLDGLILDVRTNGGGRLDMLRRTLGLFLDGGTIGSSTGRDRSFSIDVPSGRTLPLLEQVPIVVLTSDETASAAEMFAAGLQFRGRARIVGTPSAGNTENLIGYDLDDGSRFWVAELVFRLPDGSLLEGTGVQPDRVVEAEWWRYDDENDPQILAAVEELRLANRSRYAADTVER
>NC_009523.1|WP_011956007.1|1534643_1536866_+|cell-shape-determining-protein
MKPSISLNLFIRALTILSLCAGLIGVAGLTPRSAQANVQPSCSTTPLFTNGTFITGENNGAGGADTSSPPSDPFHRGLGFLVDPTQLQTSFPSGSPRRARLADDFTVTSNGWRPSALTFYAYQTYAISSSSSITGVIDLRLWNGTPGEGGEVIAGPVDATITNNQWTGVYRAYSNDLGNTDRPIMAVTVNWPFSITTLLPGTYWIEWGMAGSPSFTGPWVPAVSFATSNNARQLDLTSGEPGTWAPRGDYDVSDRIAEFPFVICGDTIPTPQITSLSPDQAVAGGAEFTLTVNGSGFIDGTGSDRSVVHWNGSPITATNFISSTQLTATIPASNIATAGTANVTVVNPGNLTSNTAPFTITNPLPTISSISPATTVAGSGGFTLTITGTNFVTNSVVRWNGSDRLTTFVSSTRLEAAISASDVATAGTANVTVFNPTPGGGESGAVTFTINNPAPTISSISPATAVAGNGGFTLTITGTNFVTNSVVRWNGSNRTTTFVSSTQLTAAIPASDVATAGTANVTVFNPAPGGGTSNTATFTITNPSPTITTISPATTVAGSGGFTLTITGTNFVTGAVVRWNGNNRTTGFVSSTVLTATIPASDVATAGTANVTVFNPAPGGGESGAATFTITNPSPTISSISPATAVAGSGGFTLTITGTNFVNGAVVRWNGSPRPTTFVSSTQLTAAIPASDIATAGTANVTVFNPAPGGGESGAVTFTIQDNTVGSPQQYRVMLPLITR
>NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase
MEIPDTLIERLRKARCVAVLTGAGVSAESGVPTFRNAQTGLWARYDPGELASPAAFRANPALVWQWYAYRRSLVAAAEPNPGHIALAELERRIADFTLITQNVDGLHHRAGSQNVVELHGNLNRYRCFADDEPVELTTVPQDAPPPCPRCGGLVRPDVVWFGELLPPRAWRVAVAAARRCELFLCVGTSGVVHPAADLPLIARSAGAYTVEINIAPGALNGLLDLHLYAPSGHMLPALAAAAFGNAP
>NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR
MTLTLPDDVLYRLINARRVVALTGGGVAAESGIPSFREAHTGHWAQYDVSELATPQAFVRNPRLVWEWYAYRRMLAERAQPGVTHYALVDLEQHYPAFTLITQSIDGLHWRAGSRDLIELNGSLRRCRCFESGHIAFAWDDDGEIPPRCVQCGSLLRPDVVMFGEGLPHHELRRARQAVEQCDVFLCVGTVGAIEPVASFPFVARRHGAFVMTIAPEDSIYTLMADYVIAAQPGVIASELVRLIVGDVGGLEELQADAL
>NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase
MKLRGPRVLIRPWESHDDDVADTWPPYNDPFDPLWNLPRPSSFGGSVWHTFLENGARRQSWAVEDAGGALIGRISLREIDRQRRQARLGVTFAAPYVGRGLGTEALTLFLDYYFGALDYRLLVLDVAAPNVRAVRCYTRLGFRYVESDWRNVGVLFDRRVLDQPMYAPLRRHFRDDMRGLKVEFFEMRLCREEWIQRRAPVGLQG
>NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein
MSLIAGNLGVVQRTLDACHLAWAVCAGAAAHLYGNRRPIQDIDILIEPGKLSEVVRLLDRQQKVVQFDGQRILWRGIKIFDDLTIRRGRDVYPFVLDADMRSRVRRLPLLGSLVPVLSPEDVLVHKALLARGPEEGKHDIADATAIARRQMLDLDYIQRRLALMRVNGAATNMLARVGVNLSTGG
>NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'
MLEINDFSAIRISLASPEDILSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWECYCGKYKRVRYKGVVCDKCGVEVTRSKVRRERMGHISLASPVSHIWFVKGTPSRLGLLLDISPRNLERVLYFASYMIVHVDEELKAQAREALQAEYREKRERIQQEAESKQIELSTQLTQDLGGMESAQITTQRRIEEEYRRLRDEISAEAERLRSDLEEKQGEAAEEDILFRGTVLIEEGEIITEKTLDALDELLDQELETLEQRKQRDLEDAEQLTGAERERKEYEASQERERLQERLQSELDRLVREEKERLEQIDSIKLKRILSEQEYRALREIAPGVFRADMGAGAVRDMIVRTIDLDKLAEELQNEVYTTQGQRRKKATKRLRVVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPEIIVRNEKRMLQEAVDALIDNGRRGRAVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKKMALELFKPFVMRRLVEKGFAHNIKSAKRIVERVRPEVWDVLEEVIKDYLVLLNRAPSLHRLSIQAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARMRMLSKYNLLSPATGDPIITPSQDIVLGCYYLTMVKDGAKGSGKMFASIDEALLAYDKGLIDIQAPIFVRMTGTVYGESDRPVRMLSPDENGAPRMLLETTIGRIIFNNELLEPLRFRNRLIAKKGLREIIADCYKYYTNLNNLTEADLDTIRAMYGDRPRDDLARYFGSEMTASQADRIKTLGFRYATRGGMTIGVDDIEIPPKKQDILAEAEKRVTEVERQFRRGLITEEERYREIVEIWQNATKQTTEAVKQHLNPFGPVAMMVNSAARGNINQLSQMAGMRGLMSDPTGRIIELPIKSNFREGLSVLEYFVSTHGGRKGLADTALRTADAGYLTRRLIDVAQDNIVTIDDCGTDEGLWIYRADDREVLQDFEQRILGRLLAAPLVDPRTGEILANRNDEIDEALVRKCKELAIDAVYVRSPLACKADYGICRMCYGRNLATGKLVDIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRVQEIFEARTPKGKAILAEIDGIVELVREDEVRKIRVVATELYTDDHELPPHYEPVVADGAQVNEGDVLAQSNRADLNGEPIVARIAGVVRIGAGQISVINEEREVREVVAPHTARLAPGIENGARVVAGQHLTEGSADPQELLALQGREAVQRYLVNEAQKVYRSQGVDINDKHIEVIVRQMLRRVRIEEPGDTDYLPGELIDSTEFVRKNAEIISQGGEPATASTMLLGITKASLTTDSFLAAASFQETTRVLTEAAITGKVDYLRGLKENVVIGKLIPAGTGIEKRRQLAEEIIGELANVAPATSTAVVEQERPDREADEALRRRLRALIGGDGDDGERNNGDFDDQVGEDVVIPPDDDDQEA
>NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta
MPPLTQSVVLQPLIVPNDVGIDALHRGKIERYSFARISNAIELPKLIETQLNSFEWFRKEGLRELFEEISPITDFTGKNMELRFLDYHFGEPRYNEHECRERGITYSAPIRVNVQLRILSTGELKESEIFLGDFPLMTENGTFVINGAERVVVSQLIRSPGVYFKEEKDPTSGRSLHSAKLIPSRGAWLEFETNKRDVISVKVDRKRKIPVTILLRAVLGWRANPDGSGQWAPDNELDQRGRDEEILELFAHLETGDHQYIKATLDKDPARHAKEALLELYKRLRPGDPPTLDNARNLIEALLFNPRRYDLSRVGRYKLNKNLWEKDTRPEVRRQAPDVKVRVLLPDDIFKIVERMIQLNNGTPGLRADDIDHLGNRRVRTVGELIQQQFRVGLLRMERVIKERMSLQDPETATPNALVNIRPVVAAMREFFGGAQLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHHSHYGRICPVETPEGPNIGLIGTMSTYARVNEMGFLETPYRKVYREVPNASEWERQGLLLRDVRDLRTGELIAVRGTRVDAAVARRIAVALLRGQILREDVVDPTTGEVIAHAGQEVNRALAERIVETPLKIIKIRPVVSQEVDYLSADEEDRFVIVQANAPLDEHNRFLEGTVSVRYAGDFDDVPIERVDYMDVSPKQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGMEYVAARDSGQVVVAKADGVVLSATADEIVILEDDGNERSYRLRKFMRSNQDTCINQRPIVSRGQRVRKGDIIADSSSTDNGELALGQNVLVAFMPWEGGNFEDAILVSERLVREDIFTSIHIEKYEVEARDTKLGPEEITRDIPNVGQDSLRNLDDRGIIYIGAEVQPNDILVGKITPKGETDLTAEERLLRAIFGEKAREVKDSSLRVPNGVRGKVIDVKVFTRDDDVELPVGVNQRVDVLLCQKRKISAGDKMAGRHGNKGVVSRILPIEDMPFLPDGTPVDIILNPIGVPSRMNIGQILETHLGWAAARLGYRVATPVFDGATETEIKEWLKRADLPPDGKITLYDGRTGEAFDRPVTVGYIYMMKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRVKTYEAIVKGEPIQEAGVPESFKVLIKELQSLGLSVEVLSADETPVELTDDADSDLAALDGINLSGMERGEF
>NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein
MPRRSTGQSLVEMALIAPILFALLFAIVDLGYYIWGYSTLFSAARAGAEAASQLPPYQSRLALRAQGDPRWLDDPCVNRILEVTNDSTGFFPVDVNQVTILYPNSADPNPRRLGGVIEVQIDYVIEPLTPLVSFINTMLGDNGTMRIKVTAQRTIESLGNNPNFANGIACTEPTP
>NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase
MARRFQSGQALVEFVIASTLILLLLAAAVDIGLLFFNMQGLTTAAQEGATYGSRYVIVRSDGAVDLDYDMIRTRVRQEAGTTGGINFVNMYDLNSDAIPDAADTNGDGVLDQFQYFLDQNGDGRAIGDPVTGLIPAGTEPSGYVRLIDHYILVQAIEDVFPFNGNPLGPEDADGNRANDLAPDVDTTPCANLADPNRQCYVFVIVKSDYNTVFGFTPAFGDKVPLSSRFVMPLRAGFVSPGAPTNPPVVQTNTPTPTPTNTPTPTATNTPTRTPTNTASPTTTNTPTNTRTPTNTPTRTNTPTRTNTPTPSNTPTRTPTFTPTATPCAGGTGNGLRGDYFIYTPGSSVGTTNFFPGAPVASRTENINMAQNNNSPITGVGNNYFSVRWTGQVEPLFSGEYTFFADTDDGVRVWVNGVQIINDWRTKSGEANGRITLTACQRVSITVEYFEWTGNQRAILSWSHANQPKQVIPVARLYSSGAPPATATRTLTPSRTPTFTPSNTPRPTNTPTPSNTPRPTNTPTRTNTPTNTPPATNTPTRTPTFTPTRTPTFTPSLTPSNTPTRTPTFTPTRTPDTGT
>NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein
MKQRFYHKTEGQNVVLIAGILALLIGMAALAVDLGVTYAEQRNIVRGTNAASLAGMNRLISGGRDTDVARAIYESLRSNGIPVTPPGEAPQPGDRSFEAIYLGSDGAPIPGACSRVGACGSQRPEGVKYIQIRLDGEVETYFARLFGQSQLPVGATAYASVGACATGYYPFGVRSTVGGQPVFDEYGFVNYDGFYEDETYAQLRYQRLYLRDGNNPNGGFSLLRWRNNTPAGNAGALAEMLTGDGTYSQGYAEAPWPEIIQGSDGPTRPDSYPFEPNAINAGDWVYGNVFSGNPFNQQVLNQLDTLKRNRTLMTLPMYRFDNGNLTNPAYYIERFGAFLLVNYGVDNDGRAPDGPWMELAYVREGGQCANLVTGAPPTNNFTVGGSVTYLPRYRTYPDLNRPVQFLLILDVSGSMSWTFDGRGVQNGQVVTCTNPTQGCVSIETAWPNVQERRIYTAKQVLRRFVQQIDQDRRSGLRPHDTVRMVTFTGRLGNYVNNEGRVGDNNRALNDLTDVLPAGWTNDRATLEAAINEAGMVDGDPYMTAGATPSAVAFARASQVFAAAPERAPNGMKYRRVVIFVTDGVANVLRNGMQNNYGPGCELGAENVGCQMGDPLPDGSLRPLNAMVAEAQALKEAYIRPSDGSVYVVALSPTFETTGLNLVASQPDYVKRADMPDQLQQIFDDIQVSAIQGDCTPAQGEERDSMAPSEVPTDLRPELTDRIVGKVTLTDANNNTREAWITADPITRKLSYALTNVPPGQYTLRAWLGYRAPQDNISRDKYELIVRGPSTSAEIPVTVSAGRSLGGVIGVPLKLDLNDNVCPTP
>NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQRAHWYAAINVEIEPPEHKHPRESVGIDVGIKTLAVLSDGVQYENQVLLRSRLRKLKRLNRELSRRQEGSGRWNRTRKKLVKLHRRIANKRLDYTHKMTTRIARTYRIIGVEDLNVPGMLRNRRLALSIADARFGETQRQLRYKSEWYGGILVEVDRFFPSSRLCPMCGGIKSDLTLRDRMFICACGYTADRDVNAAQNIEREALRLMNRGRSGFTDSLNGRGQDIRPLEAIPDEASKWPKKGGLPDLLWFR

Crispr_ID: NC_009523_26

• CRISPR_ID: NC_009523_26
• CRISPR_location: 1560859-1560935
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NC_009523_26

Consensus_repeat	Method
TTCAACGTTCAACCTTCAACGTTCAAC	CRISPRCasFinder

spacers of NC_009523_26

>26.1|1560886|22|NC_009523|CRISPRCasFinder
GTTCCACCTGCCACGCCCGACG

CRISPR arrays and Neighbor proteins around NC_009523_26

CRISPR arrays

The CRISPR arrays of NC_009523_26

>merge|NC_009523|26|1560859-1560935|CRISPRCasFinder
CCCGACGTTCCACCTTCAACGTTCAACGTTCCACCTGCCACGCCCGACGGTCCACCTTCAACGTTCAACGTTCCACC

>NC_009523|26|23|1560859-1560935|CRISPRCasFinder
CCCGACGTTCCACCTTCAACGTTCAAC	GTTCCACCTGCCACGCCCGACG
GTCCACCTTCAACGTTCAACGTTCCACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|214621
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|376518
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	unknown	unknown	gnl|CDD|274472
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	unknown	unknown	gnl|CDD|276965
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	unknown	unknown	gnl|CDD|224033
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	unknown	unknown	gnl|CDD|349765
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	unknown	unknown	gnl|CDD|227300
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	unknown	unknown	gnl|CDD|379721
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	unknown	unknown	gnl|CDD|214807
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	unknown	unknown	gnl|CDD|238703
NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224046
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	unknown	unknown	gnl|CDD|234777

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	1.7e-71	236.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	gnl|CDD|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	6.56682e-06
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	gnl|CDD|376518	pfam01297, ZnuA, Zinc-uptake complex component A periplasmic. ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host.	7.25074e-70
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	gnl|CDD|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	1.11502e-14
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	gnl|CDD|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	4.89378e-08
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.29634e-44
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	gnl|CDD|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	4.51948e-71
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	5.26967e-160
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	5.17779e-46
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	gnl|CDD|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	4.46398e-05
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	gnl|CDD|214807	smart00758, PA14, domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.	6.19356e-18
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	gnl|CDD|238703	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. .	2.79067e-92
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	2.10495e-41
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.7755e-59
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	4.53581e-13
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	2.69568e-105
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.53089e-16
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	1.17761e-111

Protein sequences

>NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta
MPPLTQSVVLQPLIVPNDVGIDALHRGKIERYSFARISNAIELPKLIETQLNSFEWFRKEGLRELFEEISPITDFTGKNMELRFLDYHFGEPRYNEHECRERGITYSAPIRVNVQLRILSTGELKESEIFLGDFPLMTENGTFVINGAERVVVSQLIRSPGVYFKEEKDPTSGRSLHSAKLIPSRGAWLEFETNKRDVISVKVDRKRKIPVTILLRAVLGWRANPDGSGQWAPDNELDQRGRDEEILELFAHLETGDHQYIKATLDKDPARHAKEALLELYKRLRPGDPPTLDNARNLIEALLFNPRRYDLSRVGRYKLNKNLWEKDTRPEVRRQAPDVKVRVLLPDDIFKIVERMIQLNNGTPGLRADDIDHLGNRRVRTVGELIQQQFRVGLLRMERVIKERMSLQDPETATPNALVNIRPVVAAMREFFGGAQLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHHSHYGRICPVETPEGPNIGLIGTMSTYARVNEMGFLETPYRKVYREVPNASEWERQGLLLRDVRDLRTGELIAVRGTRVDAAVARRIAVALLRGQILREDVVDPTTGEVIAHAGQEVNRALAERIVETPLKIIKIRPVVSQEVDYLSADEEDRFVIVQANAPLDEHNRFLEGTVSVRYAGDFDDVPIERVDYMDVSPKQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGMEYVAARDSGQVVVAKADGVVLSATADEIVILEDDGNERSYRLRKFMRSNQDTCINQRPIVSRGQRVRKGDIIADSSSTDNGELALGQNVLVAFMPWEGGNFEDAILVSERLVREDIFTSIHIEKYEVEARDTKLGPEEITRDIPNVGQDSLRNLDDRGIIYIGAEVQPNDILVGKITPKGETDLTAEERLLRAIFGEKAREVKDSSLRVPNGVRGKVIDVKVFTRDDDVELPVGVNQRVDVLLCQKRKISAGDKMAGRHGNKGVVSRILPIEDMPFLPDGTPVDIILNPIGVPSRMNIGQILETHLGWAAARLGYRVATPVFDGATETEIKEWLKRADLPPDGKITLYDGRTGEAFDRPVTVGYIYMMKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRVKTYEAIVKGEPIQEAGVPESFKVLIKELQSLGLSVEVLSADETPVELTDDADSDLAALDGINLSGMERGEF
>NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'
MLEINDFSAIRISLASPEDILSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWECYCGKYKRVRYKGVVCDKCGVEVTRSKVRRERMGHISLASPVSHIWFVKGTPSRLGLLLDISPRNLERVLYFASYMIVHVDEELKAQAREALQAEYREKRERIQQEAESKQIELSTQLTQDLGGMESAQITTQRRIEEEYRRLRDEISAEAERLRSDLEEKQGEAAEEDILFRGTVLIEEGEIITEKTLDALDELLDQELETLEQRKQRDLEDAEQLTGAERERKEYEASQERERLQERLQSELDRLVREEKERLEQIDSIKLKRILSEQEYRALREIAPGVFRADMGAGAVRDMIVRTIDLDKLAEELQNEVYTTQGQRRKKATKRLRVVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPEIIVRNEKRMLQEAVDALIDNGRRGRAVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKKMALELFKPFVMRRLVEKGFAHNIKSAKRIVERVRPEVWDVLEEVIKDYLVLLNRAPSLHRLSIQAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARMRMLSKYNLLSPATGDPIITPSQDIVLGCYYLTMVKDGAKGSGKMFASIDEALLAYDKGLIDIQAPIFVRMTGTVYGESDRPVRMLSPDENGAPRMLLETTIGRIIFNNELLEPLRFRNRLIAKKGLREIIADCYKYYTNLNNLTEADLDTIRAMYGDRPRDDLARYFGSEMTASQADRIKTLGFRYATRGGMTIGVDDIEIPPKKQDILAEAEKRVTEVERQFRRGLITEEERYREIVEIWQNATKQTTEAVKQHLNPFGPVAMMVNSAARGNINQLSQMAGMRGLMSDPTGRIIELPIKSNFREGLSVLEYFVSTHGGRKGLADTALRTADAGYLTRRLIDVAQDNIVTIDDCGTDEGLWIYRADDREVLQDFEQRILGRLLAAPLVDPRTGEILANRNDEIDEALVRKCKELAIDAVYVRSPLACKADYGICRMCYGRNLATGKLVDIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRVQEIFEARTPKGKAILAEIDGIVELVREDEVRKIRVVATELYTDDHELPPHYEPVVADGAQVNEGDVLAQSNRADLNGEPIVARIAGVVRIGAGQISVINEEREVREVVAPHTARLAPGIENGARVVAGQHLTEGSADPQELLALQGREAVQRYLVNEAQKVYRSQGVDINDKHIEVIVRQMLRRVRIEEPGDTDYLPGELIDSTEFVRKNAEIISQGGEPATASTMLLGITKASLTTDSFLAAASFQETTRVLTEAAITGKVDYLRGLKENVVIGKLIPAGTGIEKRRQLAEEIIGELANVAPATSTAVVEQERPDREADEALRRRLRALIGGDGDDGERNNGDFDDQVGEDVVIPPDDDDQEA
>NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein
MSLIAGNLGVVQRTLDACHLAWAVCAGAAAHLYGNRRPIQDIDILIEPGKLSEVVRLLDRQQKVVQFDGQRILWRGIKIFDDLTIRRGRDVYPFVLDADMRSRVRRLPLLGSLVPVLSPEDVLVHKALLARGPEEGKHDIADATAIARRQMLDLDYIQRRLALMRVNGAATNMLARVGVNLSTGG
>NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase
MKLRGPRVLIRPWESHDDDVADTWPPYNDPFDPLWNLPRPSSFGGSVWHTFLENGARRQSWAVEDAGGALIGRISLREIDRQRRQARLGVTFAAPYVGRGLGTEALTLFLDYYFGALDYRLLVLDVAAPNVRAVRCYTRLGFRYVESDWRNVGVLFDRRVLDQPMYAPLRRHFRDDMRGLKVEFFEMRLCREEWIQRRAPVGLQG
>NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR
MTLTLPDDVLYRLINARRVVALTGGGVAAESGIPSFREAHTGHWAQYDVSELATPQAFVRNPRLVWEWYAYRRMLAERAQPGVTHYALVDLEQHYPAFTLITQSIDGLHWRAGSRDLIELNGSLRRCRCFESGHIAFAWDDDGEIPPRCVQCGSLLRPDVVMFGEGLPHHELRRARQAVEQCDVFLCVGTVGAIEPVASFPFVARRHGAFVMTIAPEDSIYTLMADYVIAAQPGVIASELVRLIVGDVGGLEELQADAL
>NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase
MEIPDTLIERLRKARCVAVLTGAGVSAESGVPTFRNAQTGLWARYDPGELASPAAFRANPALVWQWYAYRRSLVAAAEPNPGHIALAELERRIADFTLITQNVDGLHHRAGSQNVVELHGNLNRYRCFADDEPVELTTVPQDAPPPCPRCGGLVRPDVVWFGELLPPRAWRVAVAAARRCELFLCVGTSGVVHPAADLPLIARSAGAYTVEINIAPGALNGLLDLHLYAPSGHMLPALAAAAFGNAP
>NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein
MAQSPTPTAPVLHNRYRIDERLGATRLAVVYRAYDERLQRRVLVAMLRKELIDQEPLRRRFVTEAQFGARHLHPSLLHVYDSGEVAGRPFMVTEYVSGRTLREFGPLTVEVALLYFRQIVGAVAACQAAGAPHPPISSANVVLVNEGHVELIENWSMTPAESGLDVAAYRAPERASGQPPTASSVVYSLGLLLIEMLTGRRVVEGADLDGILQAQRNLALPTLSALRSHIYLPSLARLLARATAPDPLQRFPDALALSQALDEVWRSVSRDTDRLASPKHPDPVGERASAAAPHLNIRPAPSAPVPSPSPAAPVTTIDTNQLMLQSARRRSLAALIAMVALFVLVGSGAYVLTSLALEGLTSIRLPRPQVSLPEGITLPDWLTGVADGSGEVLIVTIGDVEGLNLRAEPGLNTRIIGLLPNGTRVRKLEGPRTVDNVPWVRVRGEINGQPVEGWVSQLFVRTG
>NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein
MLTRFFALMIIVVLALSACGGAQPAPSGGASPTVAPAAPTVAPAAPTVAPTTPPVAMAPALNVLAVQSFLADIAQNVAGDRLKVEALIPLGVDPHIFEPTPADVRKVADSDVLIINGAGFEEFLASLLENAGGERLVIEASKGLSSRTAREGEVAVMSPEELTDALCVEAADLFLAAEEITAGAERASAVELGAHAEKEADHGHDHDHEHAHDHGGMFWQVMLNRQADGTYAGFLKWDAEGGEIAIATGDGALVVTGIDTGAALDAEETLTLNCSGLTQAMIMDVEKGEYLLALTGFRAPQATLMIGTPGGHHHHDEGDPHFWLDPMNVVTYVANIRDGLISVDPAGAEVYRANAERYIAQLNELDRFIASEVAAIPEANRKLVTNHESFGYFADRYGFRIIGTIVPGVTTGASPSAQQLARLTERVRDAGVKVIFLETGANPQLAEQLARETGITIVSDLYTHSLSEADGPAPTYIDMMRYNVKRIVEALKQG
>NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein
MNTPHIEQEPAHLEIERLTVAYGRRRVLDDISFRVEYGERVVLVGPNGAGKSTLFKALVGLVKPQSGTIRIHGLPPGAHTDCVAYVPQREDVDWRFPVTVADVVMMGRFGRLGWLRRPTRADHAAVERGMELMGVAHLARRPIGELSGGQQQRVFLARALAQEPHILLLDEPFTGVDAATQEATLSVLDALSDQKVTIILSTHDLGLAAARFERVLLINRRLIGDGPPVRVLSRGPLAEAFGGQVLTLPDGSVLVDQCACHQSEPESIVVK
>NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease
MNTLWSWIVAPLAYGFMQRGMLAAVLVGILCAIIGCYVVLRSMAFLGDALAHAVLPGVAIAYLMGANLLMGALAAAVVVALLISLFSRQGTIKEDTAIGIVFAAALALGVALISSVRTYAVDLTHIMFGNVLGVSPTDVWLIAGIGAAVLLTVLAFYRQFLVIAFDPVLAATQRLPVERLRMLLLLLIALTIVVSLQTVGVGLVAAMLVTPGATAYLLTRRLPAMMMVAALIGAVASISGLYLSYYVNIASGAAVVLVATALFTAVFLFAPERGVVWRRG
>NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein
MPRRSTGQSLVEMALIAPILFALLFAIVDLGYYIWGYSTLFSAARAGAEAASQLPPYQSRLALRAQGDPRWLDDPCVNRILEVTNDSTGFFPVDVNQVTILYPNSADPNPRRLGGVIEVQIDYVIEPLTPLVSFINTMLGDNGTMRIKVTAQRTIESLGNNPNFANGIACTEPTP
>NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase
MARRFQSGQALVEFVIASTLILLLLAAAVDIGLLFFNMQGLTTAAQEGATYGSRYVIVRSDGAVDLDYDMIRTRVRQEAGTTGGINFVNMYDLNSDAIPDAADTNGDGVLDQFQYFLDQNGDGRAIGDPVTGLIPAGTEPSGYVRLIDHYILVQAIEDVFPFNGNPLGPEDADGNRANDLAPDVDTTPCANLADPNRQCYVFVIVKSDYNTVFGFTPAFGDKVPLSSRFVMPLRAGFVSPGAPTNPPVVQTNTPTPTPTNTPTPTATNTPTRTPTNTASPTTTNTPTNTRTPTNTPTRTNTPTRTNTPTPSNTPTRTPTFTPTATPCAGGTGNGLRGDYFIYTPGSSVGTTNFFPGAPVASRTENINMAQNNNSPITGVGNNYFSVRWTGQVEPLFSGEYTFFADTDDGVRVWVNGVQIINDWRTKSGEANGRITLTACQRVSITVEYFEWTGNQRAILSWSHANQPKQVIPVARLYSSGAPPATATRTLTPSRTPTFTPSNTPRPTNTPTPSNTPRPTNTPTRTNTPTNTPPATNTPTRTPTFTPTRTPTFTPSLTPSNTPTRTPTFTPTRTPDTGT
>NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein
MKQRFYHKTEGQNVVLIAGILALLIGMAALAVDLGVTYAEQRNIVRGTNAASLAGMNRLISGGRDTDVARAIYESLRSNGIPVTPPGEAPQPGDRSFEAIYLGSDGAPIPGACSRVGACGSQRPEGVKYIQIRLDGEVETYFARLFGQSQLPVGATAYASVGACATGYYPFGVRSTVGGQPVFDEYGFVNYDGFYEDETYAQLRYQRLYLRDGNNPNGGFSLLRWRNNTPAGNAGALAEMLTGDGTYSQGYAEAPWPEIIQGSDGPTRPDSYPFEPNAINAGDWVYGNVFSGNPFNQQVLNQLDTLKRNRTLMTLPMYRFDNGNLTNPAYYIERFGAFLLVNYGVDNDGRAPDGPWMELAYVREGGQCANLVTGAPPTNNFTVGGSVTYLPRYRTYPDLNRPVQFLLILDVSGSMSWTFDGRGVQNGQVVTCTNPTQGCVSIETAWPNVQERRIYTAKQVLRRFVQQIDQDRRSGLRPHDTVRMVTFTGRLGNYVNNEGRVGDNNRALNDLTDVLPAGWTNDRATLEAAINEAGMVDGDPYMTAGATPSAVAFARASQVFAAAPERAPNGMKYRRVVIFVTDGVANVLRNGMQNNYGPGCELGAENVGCQMGDPLPDGSLRPLNAMVAEAQALKEAYIRPSDGSVYVVALSPTFETTGLNLVASQPDYVKRADMPDQLQQIFDDIQVSAIQGDCTPAQGEERDSMAPSEVPTDLRPELTDRIVGKVTLTDANNNTREAWITADPITRKLSYALTNVPPGQYTLRAWLGYRAPQDNISRDKYELIVRGPSTSAEIPVTVSAGRSLGGVIGVPLKLDLNDNVCPTP
>NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQRAHWYAAINVEIEPPEHKHPRESVGIDVGIKTLAVLSDGVQYENQVLLRSRLRKLKRLNRELSRRQEGSGRWNRTRKKLVKLHRRIANKRLDYTHKMTTRIARTYRIIGVEDLNVPGMLRNRRLALSIADARFGETQRQLRYKSEWYGGILVEVDRFFPSSRLCPMCGGIKSDLTLRDRMFICACGYTADRDVNAAQNIEREALRLMNRGRSGFTDSLNGRGQDIRPLEAIPDEASKWPKKGGLPDLLWFR
>NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase
MTRMTRMPATVRALTLVVALLTVLAILPPAPVAASVIKVVALDDTQPEFGAGSRTLTAVIPTTLSNDPISGQVTEPYAGAKPGDQGGLAMAAIRALRWGAIPDSPLPAARTEIGAAVIGNTIWVVGGSSGGTVPTYHDTVYRGTVNTNYGQPGAGVISWTTSISLPSVSHADTSPFNNNPLAPRTNAAVAALRTGGNAGYLYVIGGAVAPGSTFSSNSVIVGDVDANGNLTWRTSPTYKLPPGVGLEGARAFVHTTAAGKTFLYVVGGRNDPPGAPPPTLSNRVYYAEINPSNGNLNLGGDNRTWQFVTMPSSVWNTAVTVGRYTSADGTLTQDLFFIYGGGTNAGIENMDTGTVWKGVINPTTGAITWEDSTTGGNAVIPGNRNSHGAVEFNGAIYLIGGRSGGTINRNGYASYVDPANLRIFKDGALNFYQDDFGALPFAANPGRRNAGVVLVPTSNPNYAFAYLIGGTDGTAPSSQVFRATIGPNLDDQTFYPPTGYYYSKPFSMLDLINEQQATVRKMTWLTNIDPANGGDIEVEYRVYSPSSGNCADTEGGWTQARDPDAGGTRFSKFNPSGAAYAINAQEYSESQLLPPGNCFQYRLTFRRGSVQNASPVLLRLGMEVIVPGNPDLNWPVNAVTTTQNANGTTRGVEVRLRNQNLTDSGPTQPANVCHASQPGCNPEGTFFVDVFIFPPGVTPISPTLPLFAPGGDSLSNPALAPYHRACLQIPKWVMQKDTTFLIAETFRWSDIKTVGIDGCVSAATNASNGTGKILRDFLDQGSGTYKVILVADTHTDLKGLVYESDVPSGDHVAERNNVSAIFDVVFVAGGAPPPPDSGPQPPPDNPPPDNGIRRVFLPLVTR
>NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein
MKPRLSGRFAPGDRLGGRRGSVHAGGRPAKSLPEAISIAERQAAE
>NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA
MRRGGLLLLLGVIIAAAAALLFFFFFQTPPTPVPEALPQEPTPVPLRKVVAARVDIPANTVLTDTETFLTLRDIPEPEYNAAPDQYFTSVNELTTKVTLRALNATEIIRARDLTEAGLSFQVPLPDSPDTPRDKVFPLEVGNLTGVADQIRPGDAVDLVMTYEIRRLIIRPSLTLDPETGQLVVTPLEETLVDRVTKTMVQNVRVLRVLKPAIPQEAGTPTPAGQQGTAPPPPPSSTQTPDTFVPGAQWILLLAMTDQEAEIVKFTLDQQDPKPQITLVLRGRDDSAIEDTTGITLRLLTSRYGLPLPEPLQPLAIAPEEITPGPARPTPTPLPVPFP
>NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein
MAGGSRTPEAAGPAKIRVMIVDDIAETRDNLEKLLFFEKDIEVVAKATTGREALALAKQHRPDVVLMDINMPDMDGIAATEALLSQVPEAQVIMMSVQGEQDYLRRAMLAGAREFLPKPIGAEELYSAIRHVYRLATTQRRYVTTPPQGPGGSGDDQGAQGQIIAVFSPKGGTGTSSIACNLAVAMRLLTGKKVALVDGNLTFGDVGVIMNLVSSKTIADLVNRISELDRDLLNDVMATHATQVKVLLAPPNPQTGELVTSDHLRTILETMKKEFEYVIVDTQASFQDRALAALDLADRIVALMTLELPCIKNIKLFLEVAELLEYPKEKTVLVLNKADNRLGMRVENVEANIQHKVALQIANAGHEMTLAVNQGVPLVIAKRDLPTSKDIYALAKLLSSGLAAKTADAAKKTEKAPEKTGLFGKLMARR
>NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein
MSLLKRIGATSGATGQLPGTPATPAAPARLGTPPAQRREEDNSVIELRQRVQQRLINELDPKLDLSNVARVRQQVEEIFNTILDSENIVLSRSERARLFESIAADILGFGPLQELLNDPEISEIMVNGPKKVYVEKRGKIQLTDVTFVDEQHVLRVIDRIVAPLGRRIDESSPMVDARLPDGSRVNAVIRPIALCGPTISIRKFRKEGITIDDLIRFGSLTSEMAEFLSACVRASLNIVVSGGTGSGKTTMLNVLSSFIPDDERIITVENAAELQLRQEHVVPLESRPPNVEGKGEISIRDLVINTLRMRPERIVVGECRGGEALEMLQAMNTGHDGSMTTLHANSPRDAIARIETMCLMAGMDLPVRAIREQIASAVNLIVQLARLKDGSRKVIYITEVQGMEGDVVVLSDIFVFEQQGLDERGKIIGQLKPTGIRPRFIDRFEERNIYLPPNIFGYGSSFI
>NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein
MPIVADPTQLIAPVGIFLAILAVFAFLASRSASNPSYEERLTQFAGRRADQQQRTAKEQLREIDKVVARGKRGSETARNLARADLKLTVTEFYMIKLLAAGVGAVVGAFIGRASWEAQLLSGIVGFALFSFLPDLYVGYAAKQRVTKFNAQLGDTINMLANSLRSGYSLLQSMELVSREAPEPTASEYRRVVQEVGLGLRTEDALDNLLKRVPSEDLDLLITAVKIQMESGGNLAQILDTIGHTIRERIRIKGEIAVLTAQGRISAYVITGLPIGLAIFITVINPNYMAPMFSFGMPPEHWCCLPVAGIVMIVIGFFAIMKIVDIEV

Crispr_ID: NC_009523_27

• CRISPR_ID: NC_009523_27
• CRISPR_location: 1561006-1561145
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NC_009523_27

Consensus_repeat	Method
TTCAACGTTCAACCTTCAACGTTCAAC	CRISPRCasFinder

spacers of NC_009523_27

>27.1|1561033|36|NC_009523|CRISPRCasFinder
GTTCCACCTTCAACGTCCGACGTTCCACCCGCCACG
>27.2|1561096|22|NC_009523|CRISPRCasFinder
CTTCAACCTTCAACCTTCAACC

CRISPR arrays and Neighbor proteins around NC_009523_27

CRISPR arrays

The CRISPR arrays of NC_009523_27

>merge|NC_009523|27|1561006-1561145|CRISPRCasFinder
CCCGACGTTCCACCTTCCACGTTCAACGTTCCACCTTCAACGTCCGACGTTCCACCCGCCACGCCCGACGTGCCACCTTCAACCTTCAACCTTCAACCTTCAACCTTCAACCTCCCACGCCCAACCTTCAACCTTCAACG

>NC_009523|27|24|1561006-1561145|CRISPRCasFinder
CCCGACGTTCCACCTTCCACGTTCAAC	GTTCCACCTTCAACGTCCGACGTTCCACCCGCCACG
CCCGACGTGCCACCTTCAACCTTCAAC	CTTCAACCTTCAACCTTCAACC
TCCCACGCCCAACCTTCAACCTTCAACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|214621
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|376518
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	unknown	unknown	gnl|CDD|274472
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	unknown	unknown	gnl|CDD|276965
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	unknown	unknown	gnl|CDD|224033
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	unknown	unknown	gnl|CDD|349765
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	unknown	unknown	gnl|CDD|227300
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	unknown	unknown	gnl|CDD|379721
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	unknown	unknown	gnl|CDD|214807
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	unknown	unknown	gnl|CDD|238703
NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224046
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	unknown	unknown	gnl|CDD|234777

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	1.7e-71	236.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	gnl|CDD|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	6.56682e-06
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	gnl|CDD|376518	pfam01297, ZnuA, Zinc-uptake complex component A periplasmic. ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host.	7.25074e-70
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	gnl|CDD|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	1.11502e-14
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	gnl|CDD|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	4.89378e-08
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.29634e-44
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	gnl|CDD|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	4.51948e-71
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	5.26967e-160
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	5.17779e-46
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	gnl|CDD|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	4.46398e-05
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	gnl|CDD|214807	smart00758, PA14, domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.	6.19356e-18
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	gnl|CDD|238703	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. .	2.79067e-92
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	2.10495e-41
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.7755e-59
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	4.53581e-13
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	2.69568e-105
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.53089e-16
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	1.17761e-111

Protein sequences

>NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta
MPPLTQSVVLQPLIVPNDVGIDALHRGKIERYSFARISNAIELPKLIETQLNSFEWFRKEGLRELFEEISPITDFTGKNMELRFLDYHFGEPRYNEHECRERGITYSAPIRVNVQLRILSTGELKESEIFLGDFPLMTENGTFVINGAERVVVSQLIRSPGVYFKEEKDPTSGRSLHSAKLIPSRGAWLEFETNKRDVISVKVDRKRKIPVTILLRAVLGWRANPDGSGQWAPDNELDQRGRDEEILELFAHLETGDHQYIKATLDKDPARHAKEALLELYKRLRPGDPPTLDNARNLIEALLFNPRRYDLSRVGRYKLNKNLWEKDTRPEVRRQAPDVKVRVLLPDDIFKIVERMIQLNNGTPGLRADDIDHLGNRRVRTVGELIQQQFRVGLLRMERVIKERMSLQDPETATPNALVNIRPVVAAMREFFGGAQLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHHSHYGRICPVETPEGPNIGLIGTMSTYARVNEMGFLETPYRKVYREVPNASEWERQGLLLRDVRDLRTGELIAVRGTRVDAAVARRIAVALLRGQILREDVVDPTTGEVIAHAGQEVNRALAERIVETPLKIIKIRPVVSQEVDYLSADEEDRFVIVQANAPLDEHNRFLEGTVSVRYAGDFDDVPIERVDYMDVSPKQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGMEYVAARDSGQVVVAKADGVVLSATADEIVILEDDGNERSYRLRKFMRSNQDTCINQRPIVSRGQRVRKGDIIADSSSTDNGELALGQNVLVAFMPWEGGNFEDAILVSERLVREDIFTSIHIEKYEVEARDTKLGPEEITRDIPNVGQDSLRNLDDRGIIYIGAEVQPNDILVGKITPKGETDLTAEERLLRAIFGEKAREVKDSSLRVPNGVRGKVIDVKVFTRDDDVELPVGVNQRVDVLLCQKRKISAGDKMAGRHGNKGVVSRILPIEDMPFLPDGTPVDIILNPIGVPSRMNIGQILETHLGWAAARLGYRVATPVFDGATETEIKEWLKRADLPPDGKITLYDGRTGEAFDRPVTVGYIYMMKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRVKTYEAIVKGEPIQEAGVPESFKVLIKELQSLGLSVEVLSADETPVELTDDADSDLAALDGINLSGMERGEF
>NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'
MLEINDFSAIRISLASPEDILSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWECYCGKYKRVRYKGVVCDKCGVEVTRSKVRRERMGHISLASPVSHIWFVKGTPSRLGLLLDISPRNLERVLYFASYMIVHVDEELKAQAREALQAEYREKRERIQQEAESKQIELSTQLTQDLGGMESAQITTQRRIEEEYRRLRDEISAEAERLRSDLEEKQGEAAEEDILFRGTVLIEEGEIITEKTLDALDELLDQELETLEQRKQRDLEDAEQLTGAERERKEYEASQERERLQERLQSELDRLVREEKERLEQIDSIKLKRILSEQEYRALREIAPGVFRADMGAGAVRDMIVRTIDLDKLAEELQNEVYTTQGQRRKKATKRLRVVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPEIIVRNEKRMLQEAVDALIDNGRRGRAVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKKMALELFKPFVMRRLVEKGFAHNIKSAKRIVERVRPEVWDVLEEVIKDYLVLLNRAPSLHRLSIQAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARMRMLSKYNLLSPATGDPIITPSQDIVLGCYYLTMVKDGAKGSGKMFASIDEALLAYDKGLIDIQAPIFVRMTGTVYGESDRPVRMLSPDENGAPRMLLETTIGRIIFNNELLEPLRFRNRLIAKKGLREIIADCYKYYTNLNNLTEADLDTIRAMYGDRPRDDLARYFGSEMTASQADRIKTLGFRYATRGGMTIGVDDIEIPPKKQDILAEAEKRVTEVERQFRRGLITEEERYREIVEIWQNATKQTTEAVKQHLNPFGPVAMMVNSAARGNINQLSQMAGMRGLMSDPTGRIIELPIKSNFREGLSVLEYFVSTHGGRKGLADTALRTADAGYLTRRLIDVAQDNIVTIDDCGTDEGLWIYRADDREVLQDFEQRILGRLLAAPLVDPRTGEILANRNDEIDEALVRKCKELAIDAVYVRSPLACKADYGICRMCYGRNLATGKLVDIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRVQEIFEARTPKGKAILAEIDGIVELVREDEVRKIRVVATELYTDDHELPPHYEPVVADGAQVNEGDVLAQSNRADLNGEPIVARIAGVVRIGAGQISVINEEREVREVVAPHTARLAPGIENGARVVAGQHLTEGSADPQELLALQGREAVQRYLVNEAQKVYRSQGVDINDKHIEVIVRQMLRRVRIEEPGDTDYLPGELIDSTEFVRKNAEIISQGGEPATASTMLLGITKASLTTDSFLAAASFQETTRVLTEAAITGKVDYLRGLKENVVIGKLIPAGTGIEKRRQLAEEIIGELANVAPATSTAVVEQERPDREADEALRRRLRALIGGDGDDGERNNGDFDDQVGEDVVIPPDDDDQEA
>NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein
MSLIAGNLGVVQRTLDACHLAWAVCAGAAAHLYGNRRPIQDIDILIEPGKLSEVVRLLDRQQKVVQFDGQRILWRGIKIFDDLTIRRGRDVYPFVLDADMRSRVRRLPLLGSLVPVLSPEDVLVHKALLARGPEEGKHDIADATAIARRQMLDLDYIQRRLALMRVNGAATNMLARVGVNLSTGG
>NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase
MKLRGPRVLIRPWESHDDDVADTWPPYNDPFDPLWNLPRPSSFGGSVWHTFLENGARRQSWAVEDAGGALIGRISLREIDRQRRQARLGVTFAAPYVGRGLGTEALTLFLDYYFGALDYRLLVLDVAAPNVRAVRCYTRLGFRYVESDWRNVGVLFDRRVLDQPMYAPLRRHFRDDMRGLKVEFFEMRLCREEWIQRRAPVGLQG
>NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR
MTLTLPDDVLYRLINARRVVALTGGGVAAESGIPSFREAHTGHWAQYDVSELATPQAFVRNPRLVWEWYAYRRMLAERAQPGVTHYALVDLEQHYPAFTLITQSIDGLHWRAGSRDLIELNGSLRRCRCFESGHIAFAWDDDGEIPPRCVQCGSLLRPDVVMFGEGLPHHELRRARQAVEQCDVFLCVGTVGAIEPVASFPFVARRHGAFVMTIAPEDSIYTLMADYVIAAQPGVIASELVRLIVGDVGGLEELQADAL
>NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase
MEIPDTLIERLRKARCVAVLTGAGVSAESGVPTFRNAQTGLWARYDPGELASPAAFRANPALVWQWYAYRRSLVAAAEPNPGHIALAELERRIADFTLITQNVDGLHHRAGSQNVVELHGNLNRYRCFADDEPVELTTVPQDAPPPCPRCGGLVRPDVVWFGELLPPRAWRVAVAAARRCELFLCVGTSGVVHPAADLPLIARSAGAYTVEINIAPGALNGLLDLHLYAPSGHMLPALAAAAFGNAP
>NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein
MAQSPTPTAPVLHNRYRIDERLGATRLAVVYRAYDERLQRRVLVAMLRKELIDQEPLRRRFVTEAQFGARHLHPSLLHVYDSGEVAGRPFMVTEYVSGRTLREFGPLTVEVALLYFRQIVGAVAACQAAGAPHPPISSANVVLVNEGHVELIENWSMTPAESGLDVAAYRAPERASGQPPTASSVVYSLGLLLIEMLTGRRVVEGADLDGILQAQRNLALPTLSALRSHIYLPSLARLLARATAPDPLQRFPDALALSQALDEVWRSVSRDTDRLASPKHPDPVGERASAAAPHLNIRPAPSAPVPSPSPAAPVTTIDTNQLMLQSARRRSLAALIAMVALFVLVGSGAYVLTSLALEGLTSIRLPRPQVSLPEGITLPDWLTGVADGSGEVLIVTIGDVEGLNLRAEPGLNTRIIGLLPNGTRVRKLEGPRTVDNVPWVRVRGEINGQPVEGWVSQLFVRTG
>NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein
MLTRFFALMIIVVLALSACGGAQPAPSGGASPTVAPAAPTVAPAAPTVAPTTPPVAMAPALNVLAVQSFLADIAQNVAGDRLKVEALIPLGVDPHIFEPTPADVRKVADSDVLIINGAGFEEFLASLLENAGGERLVIEASKGLSSRTAREGEVAVMSPEELTDALCVEAADLFLAAEEITAGAERASAVELGAHAEKEADHGHDHDHEHAHDHGGMFWQVMLNRQADGTYAGFLKWDAEGGEIAIATGDGALVVTGIDTGAALDAEETLTLNCSGLTQAMIMDVEKGEYLLALTGFRAPQATLMIGTPGGHHHHDEGDPHFWLDPMNVVTYVANIRDGLISVDPAGAEVYRANAERYIAQLNELDRFIASEVAAIPEANRKLVTNHESFGYFADRYGFRIIGTIVPGVTTGASPSAQQLARLTERVRDAGVKVIFLETGANPQLAEQLARETGITIVSDLYTHSLSEADGPAPTYIDMMRYNVKRIVEALKQG
>NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein
MNTPHIEQEPAHLEIERLTVAYGRRRVLDDISFRVEYGERVVLVGPNGAGKSTLFKALVGLVKPQSGTIRIHGLPPGAHTDCVAYVPQREDVDWRFPVTVADVVMMGRFGRLGWLRRPTRADHAAVERGMELMGVAHLARRPIGELSGGQQQRVFLARALAQEPHILLLDEPFTGVDAATQEATLSVLDALSDQKVTIILSTHDLGLAAARFERVLLINRRLIGDGPPVRVLSRGPLAEAFGGQVLTLPDGSVLVDQCACHQSEPESIVVK
>NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease
MNTLWSWIVAPLAYGFMQRGMLAAVLVGILCAIIGCYVVLRSMAFLGDALAHAVLPGVAIAYLMGANLLMGALAAAVVVALLISLFSRQGTIKEDTAIGIVFAAALALGVALISSVRTYAVDLTHIMFGNVLGVSPTDVWLIAGIGAAVLLTVLAFYRQFLVIAFDPVLAATQRLPVERLRMLLLLLIALTIVVSLQTVGVGLVAAMLVTPGATAYLLTRRLPAMMMVAALIGAVASISGLYLSYYVNIASGAAVVLVATALFTAVFLFAPERGVVWRRG
>NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein
MPRRSTGQSLVEMALIAPILFALLFAIVDLGYYIWGYSTLFSAARAGAEAASQLPPYQSRLALRAQGDPRWLDDPCVNRILEVTNDSTGFFPVDVNQVTILYPNSADPNPRRLGGVIEVQIDYVIEPLTPLVSFINTMLGDNGTMRIKVTAQRTIESLGNNPNFANGIACTEPTP
>NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase
MARRFQSGQALVEFVIASTLILLLLAAAVDIGLLFFNMQGLTTAAQEGATYGSRYVIVRSDGAVDLDYDMIRTRVRQEAGTTGGINFVNMYDLNSDAIPDAADTNGDGVLDQFQYFLDQNGDGRAIGDPVTGLIPAGTEPSGYVRLIDHYILVQAIEDVFPFNGNPLGPEDADGNRANDLAPDVDTTPCANLADPNRQCYVFVIVKSDYNTVFGFTPAFGDKVPLSSRFVMPLRAGFVSPGAPTNPPVVQTNTPTPTPTNTPTPTATNTPTRTPTNTASPTTTNTPTNTRTPTNTPTRTNTPTRTNTPTPSNTPTRTPTFTPTATPCAGGTGNGLRGDYFIYTPGSSVGTTNFFPGAPVASRTENINMAQNNNSPITGVGNNYFSVRWTGQVEPLFSGEYTFFADTDDGVRVWVNGVQIINDWRTKSGEANGRITLTACQRVSITVEYFEWTGNQRAILSWSHANQPKQVIPVARLYSSGAPPATATRTLTPSRTPTFTPSNTPRPTNTPTPSNTPRPTNTPTRTNTPTNTPPATNTPTRTPTFTPTRTPTFTPSLTPSNTPTRTPTFTPTRTPDTGT
>NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein
MKQRFYHKTEGQNVVLIAGILALLIGMAALAVDLGVTYAEQRNIVRGTNAASLAGMNRLISGGRDTDVARAIYESLRSNGIPVTPPGEAPQPGDRSFEAIYLGSDGAPIPGACSRVGACGSQRPEGVKYIQIRLDGEVETYFARLFGQSQLPVGATAYASVGACATGYYPFGVRSTVGGQPVFDEYGFVNYDGFYEDETYAQLRYQRLYLRDGNNPNGGFSLLRWRNNTPAGNAGALAEMLTGDGTYSQGYAEAPWPEIIQGSDGPTRPDSYPFEPNAINAGDWVYGNVFSGNPFNQQVLNQLDTLKRNRTLMTLPMYRFDNGNLTNPAYYIERFGAFLLVNYGVDNDGRAPDGPWMELAYVREGGQCANLVTGAPPTNNFTVGGSVTYLPRYRTYPDLNRPVQFLLILDVSGSMSWTFDGRGVQNGQVVTCTNPTQGCVSIETAWPNVQERRIYTAKQVLRRFVQQIDQDRRSGLRPHDTVRMVTFTGRLGNYVNNEGRVGDNNRALNDLTDVLPAGWTNDRATLEAAINEAGMVDGDPYMTAGATPSAVAFARASQVFAAAPERAPNGMKYRRVVIFVTDGVANVLRNGMQNNYGPGCELGAENVGCQMGDPLPDGSLRPLNAMVAEAQALKEAYIRPSDGSVYVVALSPTFETTGLNLVASQPDYVKRADMPDQLQQIFDDIQVSAIQGDCTPAQGEERDSMAPSEVPTDLRPELTDRIVGKVTLTDANNNTREAWITADPITRKLSYALTNVPPGQYTLRAWLGYRAPQDNISRDKYELIVRGPSTSAEIPVTVSAGRSLGGVIGVPLKLDLNDNVCPTP
>NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQRAHWYAAINVEIEPPEHKHPRESVGIDVGIKTLAVLSDGVQYENQVLLRSRLRKLKRLNRELSRRQEGSGRWNRTRKKLVKLHRRIANKRLDYTHKMTTRIARTYRIIGVEDLNVPGMLRNRRLALSIADARFGETQRQLRYKSEWYGGILVEVDRFFPSSRLCPMCGGIKSDLTLRDRMFICACGYTADRDVNAAQNIEREALRLMNRGRSGFTDSLNGRGQDIRPLEAIPDEASKWPKKGGLPDLLWFR
>NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase
MTRMTRMPATVRALTLVVALLTVLAILPPAPVAASVIKVVALDDTQPEFGAGSRTLTAVIPTTLSNDPISGQVTEPYAGAKPGDQGGLAMAAIRALRWGAIPDSPLPAARTEIGAAVIGNTIWVVGGSSGGTVPTYHDTVYRGTVNTNYGQPGAGVISWTTSISLPSVSHADTSPFNNNPLAPRTNAAVAALRTGGNAGYLYVIGGAVAPGSTFSSNSVIVGDVDANGNLTWRTSPTYKLPPGVGLEGARAFVHTTAAGKTFLYVVGGRNDPPGAPPPTLSNRVYYAEINPSNGNLNLGGDNRTWQFVTMPSSVWNTAVTVGRYTSADGTLTQDLFFIYGGGTNAGIENMDTGTVWKGVINPTTGAITWEDSTTGGNAVIPGNRNSHGAVEFNGAIYLIGGRSGGTINRNGYASYVDPANLRIFKDGALNFYQDDFGALPFAANPGRRNAGVVLVPTSNPNYAFAYLIGGTDGTAPSSQVFRATIGPNLDDQTFYPPTGYYYSKPFSMLDLINEQQATVRKMTWLTNIDPANGGDIEVEYRVYSPSSGNCADTEGGWTQARDPDAGGTRFSKFNPSGAAYAINAQEYSESQLLPPGNCFQYRLTFRRGSVQNASPVLLRLGMEVIVPGNPDLNWPVNAVTTTQNANGTTRGVEVRLRNQNLTDSGPTQPANVCHASQPGCNPEGTFFVDVFIFPPGVTPISPTLPLFAPGGDSLSNPALAPYHRACLQIPKWVMQKDTTFLIAETFRWSDIKTVGIDGCVSAATNASNGTGKILRDFLDQGSGTYKVILVADTHTDLKGLVYESDVPSGDHVAERNNVSAIFDVVFVAGGAPPPPDSGPQPPPDNPPPDNGIRRVFLPLVTR
>NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein
MKPRLSGRFAPGDRLGGRRGSVHAGGRPAKSLPEAISIAERQAAE
>NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA
MRRGGLLLLLGVIIAAAAALLFFFFFQTPPTPVPEALPQEPTPVPLRKVVAARVDIPANTVLTDTETFLTLRDIPEPEYNAAPDQYFTSVNELTTKVTLRALNATEIIRARDLTEAGLSFQVPLPDSPDTPRDKVFPLEVGNLTGVADQIRPGDAVDLVMTYEIRRLIIRPSLTLDPETGQLVVTPLEETLVDRVTKTMVQNVRVLRVLKPAIPQEAGTPTPAGQQGTAPPPPPSSTQTPDTFVPGAQWILLLAMTDQEAEIVKFTLDQQDPKPQITLVLRGRDDSAIEDTTGITLRLLTSRYGLPLPEPLQPLAIAPEEITPGPARPTPTPLPVPFP
>NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein
MAGGSRTPEAAGPAKIRVMIVDDIAETRDNLEKLLFFEKDIEVVAKATTGREALALAKQHRPDVVLMDINMPDMDGIAATEALLSQVPEAQVIMMSVQGEQDYLRRAMLAGAREFLPKPIGAEELYSAIRHVYRLATTQRRYVTTPPQGPGGSGDDQGAQGQIIAVFSPKGGTGTSSIACNLAVAMRLLTGKKVALVDGNLTFGDVGVIMNLVSSKTIADLVNRISELDRDLLNDVMATHATQVKVLLAPPNPQTGELVTSDHLRTILETMKKEFEYVIVDTQASFQDRALAALDLADRIVALMTLELPCIKNIKLFLEVAELLEYPKEKTVLVLNKADNRLGMRVENVEANIQHKVALQIANAGHEMTLAVNQGVPLVIAKRDLPTSKDIYALAKLLSSGLAAKTADAAKKTEKAPEKTGLFGKLMARR
>NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein
MSLLKRIGATSGATGQLPGTPATPAAPARLGTPPAQRREEDNSVIELRQRVQQRLINELDPKLDLSNVARVRQQVEEIFNTILDSENIVLSRSERARLFESIAADILGFGPLQELLNDPEISEIMVNGPKKVYVEKRGKIQLTDVTFVDEQHVLRVIDRIVAPLGRRIDESSPMVDARLPDGSRVNAVIRPIALCGPTISIRKFRKEGITIDDLIRFGSLTSEMAEFLSACVRASLNIVVSGGTGSGKTTMLNVLSSFIPDDERIITVENAAELQLRQEHVVPLESRPPNVEGKGEISIRDLVINTLRMRPERIVVGECRGGEALEMLQAMNTGHDGSMTTLHANSPRDAIARIETMCLMAGMDLPVRAIREQIASAVNLIVQLARLKDGSRKVIYITEVQGMEGDVVVLSDIFVFEQQGLDERGKIIGQLKPTGIRPRFIDRFEERNIYLPPNIFGYGSSFI
>NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein
MPIVADPTQLIAPVGIFLAILAVFAFLASRSASNPSYEERLTQFAGRRADQQQRTAKEQLREIDKVVARGKRGSETARNLARADLKLTVTEFYMIKLLAAGVGAVVGAFIGRASWEAQLLSGIVGFALFSFLPDLYVGYAAKQRVTKFNAQLGDTINMLANSLRSGYSLLQSMELVSREAPEPTASEYRRVVQEVGLGLRTEDALDNLLKRVPSEDLDLLITAVKIQMESGGNLAQILDTIGHTIRERIRIKGEIAVLTAQGRISAYVITGLPIGLAIFITVINPNYMAPMFSFGMPPEHWCCLPVAGIVMIVIGFFAIMKIVDIEV

Crispr_ID: NC_009523_28

• CRISPR_ID: NC_009523_28
• CRISPR_location: 1561754-1562020
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 5 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NC_009523_28

Consensus_repeat	Method
TTCAACGTTCAACCTTCAACGTTCAAC	CRISPRCasFinder

spacers of NC_009523_28

>28.1|1561781|22|NC_009523|CRISPRCasFinder
GTTCCACACCCAACCTTCAACC
>28.2|1561830|22|NC_009523|CRISPRCasFinder
GCCCAACGTTCCACTTTCCGCG
>28.3|1561879|22|NC_009523|CRISPRCasFinder
GTTCAACCTTCAACGTTCAACG
>28.4|1561928|19|NC_009523|CRISPRCasFinder
CTTCCACCAACGTTCAACC
>28.5|1561974|19|NC_009523|CRISPRCasFinder
CAACGTTCAACCTTCAACG

CRISPR arrays and Neighbor proteins around NC_009523_28

CRISPR arrays

The CRISPR arrays of NC_009523_28

>merge|NC_009523|28|1561754-1562020|CRISPRCasFinder
TCGGATCTTCGACGTTCAACGTTCAACGTTCCACACCCAACCTTCAACCTTCAACCCTCAACGTTGAACGTTCAACGCCCAACGTTCCACTTTCCGCGTCCAACGTTCAACGTTCAACCTTCAACGTTCAACCTTCAACGTTCAACGTTCAACCTTCAACCTTCAACGTTCCACCTTCCACCAACGTTCAACCTTCAACGTTCAACGTTCCACCTTCCACCAACGTTCAACCTTCAACGTTCAACCTTCAACCTTCAACCTTCAACC

>NC_009523|28|25|1561754-1562020|CRISPRCasFinder
TCGGATCTTCGACGTTCAACGTTCAAC	GTTCCACACCCAACCTTCAACC
TTCAACCCTCAACGTTGAACGTTCAAC	GCCCAACGTTCCACTTTCCGCG
TCCAACGTTCAACGTTCAACCTTCAAC	GTTCAACCTTCAACGTTCAACG
TTCAACCTTCAACCTTCAACGTTCCAC	CTTCCACCAACGTTCAACC
TTCAACGTTCAACGTTCCACCTTCCAC	CAACGTTCAACCTTCAACG
TTCAACCTTCAACCTTCAACCTTCAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|214621
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|376518
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	unknown	unknown	gnl|CDD|274472
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	unknown	unknown	gnl|CDD|276965
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	unknown	unknown	gnl|CDD|224033
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	unknown	unknown	gnl|CDD|349765
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	unknown	unknown	gnl|CDD|227300
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	unknown	unknown	gnl|CDD|379721
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	unknown	unknown	gnl|CDD|214807
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	unknown	unknown	gnl|CDD|238703
NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224046
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	unknown	unknown	gnl|CDD|234777

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	1.7e-71	236.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	gnl|CDD|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	6.56682e-06
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	gnl|CDD|376518	pfam01297, ZnuA, Zinc-uptake complex component A periplasmic. ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host.	7.25074e-70
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	gnl|CDD|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	1.11502e-14
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	gnl|CDD|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	4.89378e-08
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.29634e-44
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	gnl|CDD|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	4.51948e-71
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	5.26967e-160
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	5.17779e-46
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	gnl|CDD|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	4.46398e-05
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	gnl|CDD|214807	smart00758, PA14, domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.	6.19356e-18
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	gnl|CDD|238703	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. .	2.79067e-92
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	2.10495e-41
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.7755e-59
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	4.53581e-13
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	2.69568e-105
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.53089e-16
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	1.17761e-111

Protein sequences

>NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta
MPPLTQSVVLQPLIVPNDVGIDALHRGKIERYSFARISNAIELPKLIETQLNSFEWFRKEGLRELFEEISPITDFTGKNMELRFLDYHFGEPRYNEHECRERGITYSAPIRVNVQLRILSTGELKESEIFLGDFPLMTENGTFVINGAERVVVSQLIRSPGVYFKEEKDPTSGRSLHSAKLIPSRGAWLEFETNKRDVISVKVDRKRKIPVTILLRAVLGWRANPDGSGQWAPDNELDQRGRDEEILELFAHLETGDHQYIKATLDKDPARHAKEALLELYKRLRPGDPPTLDNARNLIEALLFNPRRYDLSRVGRYKLNKNLWEKDTRPEVRRQAPDVKVRVLLPDDIFKIVERMIQLNNGTPGLRADDIDHLGNRRVRTVGELIQQQFRVGLLRMERVIKERMSLQDPETATPNALVNIRPVVAAMREFFGGAQLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHHSHYGRICPVETPEGPNIGLIGTMSTYARVNEMGFLETPYRKVYREVPNASEWERQGLLLRDVRDLRTGELIAVRGTRVDAAVARRIAVALLRGQILREDVVDPTTGEVIAHAGQEVNRALAERIVETPLKIIKIRPVVSQEVDYLSADEEDRFVIVQANAPLDEHNRFLEGTVSVRYAGDFDDVPIERVDYMDVSPKQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGMEYVAARDSGQVVVAKADGVVLSATADEIVILEDDGNERSYRLRKFMRSNQDTCINQRPIVSRGQRVRKGDIIADSSSTDNGELALGQNVLVAFMPWEGGNFEDAILVSERLVREDIFTSIHIEKYEVEARDTKLGPEEITRDIPNVGQDSLRNLDDRGIIYIGAEVQPNDILVGKITPKGETDLTAEERLLRAIFGEKAREVKDSSLRVPNGVRGKVIDVKVFTRDDDVELPVGVNQRVDVLLCQKRKISAGDKMAGRHGNKGVVSRILPIEDMPFLPDGTPVDIILNPIGVPSRMNIGQILETHLGWAAARLGYRVATPVFDGATETEIKEWLKRADLPPDGKITLYDGRTGEAFDRPVTVGYIYMMKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRVKTYEAIVKGEPIQEAGVPESFKVLIKELQSLGLSVEVLSADETPVELTDDADSDLAALDGINLSGMERGEF
>NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'
MLEINDFSAIRISLASPEDILSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWECYCGKYKRVRYKGVVCDKCGVEVTRSKVRRERMGHISLASPVSHIWFVKGTPSRLGLLLDISPRNLERVLYFASYMIVHVDEELKAQAREALQAEYREKRERIQQEAESKQIELSTQLTQDLGGMESAQITTQRRIEEEYRRLRDEISAEAERLRSDLEEKQGEAAEEDILFRGTVLIEEGEIITEKTLDALDELLDQELETLEQRKQRDLEDAEQLTGAERERKEYEASQERERLQERLQSELDRLVREEKERLEQIDSIKLKRILSEQEYRALREIAPGVFRADMGAGAVRDMIVRTIDLDKLAEELQNEVYTTQGQRRKKATKRLRVVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPEIIVRNEKRMLQEAVDALIDNGRRGRAVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKKMALELFKPFVMRRLVEKGFAHNIKSAKRIVERVRPEVWDVLEEVIKDYLVLLNRAPSLHRLSIQAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARMRMLSKYNLLSPATGDPIITPSQDIVLGCYYLTMVKDGAKGSGKMFASIDEALLAYDKGLIDIQAPIFVRMTGTVYGESDRPVRMLSPDENGAPRMLLETTIGRIIFNNELLEPLRFRNRLIAKKGLREIIADCYKYYTNLNNLTEADLDTIRAMYGDRPRDDLARYFGSEMTASQADRIKTLGFRYATRGGMTIGVDDIEIPPKKQDILAEAEKRVTEVERQFRRGLITEEERYREIVEIWQNATKQTTEAVKQHLNPFGPVAMMVNSAARGNINQLSQMAGMRGLMSDPTGRIIELPIKSNFREGLSVLEYFVSTHGGRKGLADTALRTADAGYLTRRLIDVAQDNIVTIDDCGTDEGLWIYRADDREVLQDFEQRILGRLLAAPLVDPRTGEILANRNDEIDEALVRKCKELAIDAVYVRSPLACKADYGICRMCYGRNLATGKLVDIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRVQEIFEARTPKGKAILAEIDGIVELVREDEVRKIRVVATELYTDDHELPPHYEPVVADGAQVNEGDVLAQSNRADLNGEPIVARIAGVVRIGAGQISVINEEREVREVVAPHTARLAPGIENGARVVAGQHLTEGSADPQELLALQGREAVQRYLVNEAQKVYRSQGVDINDKHIEVIVRQMLRRVRIEEPGDTDYLPGELIDSTEFVRKNAEIISQGGEPATASTMLLGITKASLTTDSFLAAASFQETTRVLTEAAITGKVDYLRGLKENVVIGKLIPAGTGIEKRRQLAEEIIGELANVAPATSTAVVEQERPDREADEALRRRLRALIGGDGDDGERNNGDFDDQVGEDVVIPPDDDDQEA
>NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein
MSLIAGNLGVVQRTLDACHLAWAVCAGAAAHLYGNRRPIQDIDILIEPGKLSEVVRLLDRQQKVVQFDGQRILWRGIKIFDDLTIRRGRDVYPFVLDADMRSRVRRLPLLGSLVPVLSPEDVLVHKALLARGPEEGKHDIADATAIARRQMLDLDYIQRRLALMRVNGAATNMLARVGVNLSTGG
>NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase
MKLRGPRVLIRPWESHDDDVADTWPPYNDPFDPLWNLPRPSSFGGSVWHTFLENGARRQSWAVEDAGGALIGRISLREIDRQRRQARLGVTFAAPYVGRGLGTEALTLFLDYYFGALDYRLLVLDVAAPNVRAVRCYTRLGFRYVESDWRNVGVLFDRRVLDQPMYAPLRRHFRDDMRGLKVEFFEMRLCREEWIQRRAPVGLQG
>NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR
MTLTLPDDVLYRLINARRVVALTGGGVAAESGIPSFREAHTGHWAQYDVSELATPQAFVRNPRLVWEWYAYRRMLAERAQPGVTHYALVDLEQHYPAFTLITQSIDGLHWRAGSRDLIELNGSLRRCRCFESGHIAFAWDDDGEIPPRCVQCGSLLRPDVVMFGEGLPHHELRRARQAVEQCDVFLCVGTVGAIEPVASFPFVARRHGAFVMTIAPEDSIYTLMADYVIAAQPGVIASELVRLIVGDVGGLEELQADAL
>NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase
MEIPDTLIERLRKARCVAVLTGAGVSAESGVPTFRNAQTGLWARYDPGELASPAAFRANPALVWQWYAYRRSLVAAAEPNPGHIALAELERRIADFTLITQNVDGLHHRAGSQNVVELHGNLNRYRCFADDEPVELTTVPQDAPPPCPRCGGLVRPDVVWFGELLPPRAWRVAVAAARRCELFLCVGTSGVVHPAADLPLIARSAGAYTVEINIAPGALNGLLDLHLYAPSGHMLPALAAAAFGNAP
>NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein
MAQSPTPTAPVLHNRYRIDERLGATRLAVVYRAYDERLQRRVLVAMLRKELIDQEPLRRRFVTEAQFGARHLHPSLLHVYDSGEVAGRPFMVTEYVSGRTLREFGPLTVEVALLYFRQIVGAVAACQAAGAPHPPISSANVVLVNEGHVELIENWSMTPAESGLDVAAYRAPERASGQPPTASSVVYSLGLLLIEMLTGRRVVEGADLDGILQAQRNLALPTLSALRSHIYLPSLARLLARATAPDPLQRFPDALALSQALDEVWRSVSRDTDRLASPKHPDPVGERASAAAPHLNIRPAPSAPVPSPSPAAPVTTIDTNQLMLQSARRRSLAALIAMVALFVLVGSGAYVLTSLALEGLTSIRLPRPQVSLPEGITLPDWLTGVADGSGEVLIVTIGDVEGLNLRAEPGLNTRIIGLLPNGTRVRKLEGPRTVDNVPWVRVRGEINGQPVEGWVSQLFVRTG
>NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein
MLTRFFALMIIVVLALSACGGAQPAPSGGASPTVAPAAPTVAPAAPTVAPTTPPVAMAPALNVLAVQSFLADIAQNVAGDRLKVEALIPLGVDPHIFEPTPADVRKVADSDVLIINGAGFEEFLASLLENAGGERLVIEASKGLSSRTAREGEVAVMSPEELTDALCVEAADLFLAAEEITAGAERASAVELGAHAEKEADHGHDHDHEHAHDHGGMFWQVMLNRQADGTYAGFLKWDAEGGEIAIATGDGALVVTGIDTGAALDAEETLTLNCSGLTQAMIMDVEKGEYLLALTGFRAPQATLMIGTPGGHHHHDEGDPHFWLDPMNVVTYVANIRDGLISVDPAGAEVYRANAERYIAQLNELDRFIASEVAAIPEANRKLVTNHESFGYFADRYGFRIIGTIVPGVTTGASPSAQQLARLTERVRDAGVKVIFLETGANPQLAEQLARETGITIVSDLYTHSLSEADGPAPTYIDMMRYNVKRIVEALKQG
>NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein
MNTPHIEQEPAHLEIERLTVAYGRRRVLDDISFRVEYGERVVLVGPNGAGKSTLFKALVGLVKPQSGTIRIHGLPPGAHTDCVAYVPQREDVDWRFPVTVADVVMMGRFGRLGWLRRPTRADHAAVERGMELMGVAHLARRPIGELSGGQQQRVFLARALAQEPHILLLDEPFTGVDAATQEATLSVLDALSDQKVTIILSTHDLGLAAARFERVLLINRRLIGDGPPVRVLSRGPLAEAFGGQVLTLPDGSVLVDQCACHQSEPESIVVK
>NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease
MNTLWSWIVAPLAYGFMQRGMLAAVLVGILCAIIGCYVVLRSMAFLGDALAHAVLPGVAIAYLMGANLLMGALAAAVVVALLISLFSRQGTIKEDTAIGIVFAAALALGVALISSVRTYAVDLTHIMFGNVLGVSPTDVWLIAGIGAAVLLTVLAFYRQFLVIAFDPVLAATQRLPVERLRMLLLLLIALTIVVSLQTVGVGLVAAMLVTPGATAYLLTRRLPAMMMVAALIGAVASISGLYLSYYVNIASGAAVVLVATALFTAVFLFAPERGVVWRRG
>NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein
MPRRSTGQSLVEMALIAPILFALLFAIVDLGYYIWGYSTLFSAARAGAEAASQLPPYQSRLALRAQGDPRWLDDPCVNRILEVTNDSTGFFPVDVNQVTILYPNSADPNPRRLGGVIEVQIDYVIEPLTPLVSFINTMLGDNGTMRIKVTAQRTIESLGNNPNFANGIACTEPTP
>NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase
MARRFQSGQALVEFVIASTLILLLLAAAVDIGLLFFNMQGLTTAAQEGATYGSRYVIVRSDGAVDLDYDMIRTRVRQEAGTTGGINFVNMYDLNSDAIPDAADTNGDGVLDQFQYFLDQNGDGRAIGDPVTGLIPAGTEPSGYVRLIDHYILVQAIEDVFPFNGNPLGPEDADGNRANDLAPDVDTTPCANLADPNRQCYVFVIVKSDYNTVFGFTPAFGDKVPLSSRFVMPLRAGFVSPGAPTNPPVVQTNTPTPTPTNTPTPTATNTPTRTPTNTASPTTTNTPTNTRTPTNTPTRTNTPTRTNTPTPSNTPTRTPTFTPTATPCAGGTGNGLRGDYFIYTPGSSVGTTNFFPGAPVASRTENINMAQNNNSPITGVGNNYFSVRWTGQVEPLFSGEYTFFADTDDGVRVWVNGVQIINDWRTKSGEANGRITLTACQRVSITVEYFEWTGNQRAILSWSHANQPKQVIPVARLYSSGAPPATATRTLTPSRTPTFTPSNTPRPTNTPTPSNTPRPTNTPTRTNTPTNTPPATNTPTRTPTFTPTRTPTFTPSLTPSNTPTRTPTFTPTRTPDTGT
>NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein
MKQRFYHKTEGQNVVLIAGILALLIGMAALAVDLGVTYAEQRNIVRGTNAASLAGMNRLISGGRDTDVARAIYESLRSNGIPVTPPGEAPQPGDRSFEAIYLGSDGAPIPGACSRVGACGSQRPEGVKYIQIRLDGEVETYFARLFGQSQLPVGATAYASVGACATGYYPFGVRSTVGGQPVFDEYGFVNYDGFYEDETYAQLRYQRLYLRDGNNPNGGFSLLRWRNNTPAGNAGALAEMLTGDGTYSQGYAEAPWPEIIQGSDGPTRPDSYPFEPNAINAGDWVYGNVFSGNPFNQQVLNQLDTLKRNRTLMTLPMYRFDNGNLTNPAYYIERFGAFLLVNYGVDNDGRAPDGPWMELAYVREGGQCANLVTGAPPTNNFTVGGSVTYLPRYRTYPDLNRPVQFLLILDVSGSMSWTFDGRGVQNGQVVTCTNPTQGCVSIETAWPNVQERRIYTAKQVLRRFVQQIDQDRRSGLRPHDTVRMVTFTGRLGNYVNNEGRVGDNNRALNDLTDVLPAGWTNDRATLEAAINEAGMVDGDPYMTAGATPSAVAFARASQVFAAAPERAPNGMKYRRVVIFVTDGVANVLRNGMQNNYGPGCELGAENVGCQMGDPLPDGSLRPLNAMVAEAQALKEAYIRPSDGSVYVVALSPTFETTGLNLVASQPDYVKRADMPDQLQQIFDDIQVSAIQGDCTPAQGEERDSMAPSEVPTDLRPELTDRIVGKVTLTDANNNTREAWITADPITRKLSYALTNVPPGQYTLRAWLGYRAPQDNISRDKYELIVRGPSTSAEIPVTVSAGRSLGGVIGVPLKLDLNDNVCPTP
>NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQRAHWYAAINVEIEPPEHKHPRESVGIDVGIKTLAVLSDGVQYENQVLLRSRLRKLKRLNRELSRRQEGSGRWNRTRKKLVKLHRRIANKRLDYTHKMTTRIARTYRIIGVEDLNVPGMLRNRRLALSIADARFGETQRQLRYKSEWYGGILVEVDRFFPSSRLCPMCGGIKSDLTLRDRMFICACGYTADRDVNAAQNIEREALRLMNRGRSGFTDSLNGRGQDIRPLEAIPDEASKWPKKGGLPDLLWFR
>NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase
MTRMTRMPATVRALTLVVALLTVLAILPPAPVAASVIKVVALDDTQPEFGAGSRTLTAVIPTTLSNDPISGQVTEPYAGAKPGDQGGLAMAAIRALRWGAIPDSPLPAARTEIGAAVIGNTIWVVGGSSGGTVPTYHDTVYRGTVNTNYGQPGAGVISWTTSISLPSVSHADTSPFNNNPLAPRTNAAVAALRTGGNAGYLYVIGGAVAPGSTFSSNSVIVGDVDANGNLTWRTSPTYKLPPGVGLEGARAFVHTTAAGKTFLYVVGGRNDPPGAPPPTLSNRVYYAEINPSNGNLNLGGDNRTWQFVTMPSSVWNTAVTVGRYTSADGTLTQDLFFIYGGGTNAGIENMDTGTVWKGVINPTTGAITWEDSTTGGNAVIPGNRNSHGAVEFNGAIYLIGGRSGGTINRNGYASYVDPANLRIFKDGALNFYQDDFGALPFAANPGRRNAGVVLVPTSNPNYAFAYLIGGTDGTAPSSQVFRATIGPNLDDQTFYPPTGYYYSKPFSMLDLINEQQATVRKMTWLTNIDPANGGDIEVEYRVYSPSSGNCADTEGGWTQARDPDAGGTRFSKFNPSGAAYAINAQEYSESQLLPPGNCFQYRLTFRRGSVQNASPVLLRLGMEVIVPGNPDLNWPVNAVTTTQNANGTTRGVEVRLRNQNLTDSGPTQPANVCHASQPGCNPEGTFFVDVFIFPPGVTPISPTLPLFAPGGDSLSNPALAPYHRACLQIPKWVMQKDTTFLIAETFRWSDIKTVGIDGCVSAATNASNGTGKILRDFLDQGSGTYKVILVADTHTDLKGLVYESDVPSGDHVAERNNVSAIFDVVFVAGGAPPPPDSGPQPPPDNPPPDNGIRRVFLPLVTR
>NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein
MKPRLSGRFAPGDRLGGRRGSVHAGGRPAKSLPEAISIAERQAAE
>NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA
MRRGGLLLLLGVIIAAAAALLFFFFFQTPPTPVPEALPQEPTPVPLRKVVAARVDIPANTVLTDTETFLTLRDIPEPEYNAAPDQYFTSVNELTTKVTLRALNATEIIRARDLTEAGLSFQVPLPDSPDTPRDKVFPLEVGNLTGVADQIRPGDAVDLVMTYEIRRLIIRPSLTLDPETGQLVVTPLEETLVDRVTKTMVQNVRVLRVLKPAIPQEAGTPTPAGQQGTAPPPPPSSTQTPDTFVPGAQWILLLAMTDQEAEIVKFTLDQQDPKPQITLVLRGRDDSAIEDTTGITLRLLTSRYGLPLPEPLQPLAIAPEEITPGPARPTPTPLPVPFP
>NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein
MAGGSRTPEAAGPAKIRVMIVDDIAETRDNLEKLLFFEKDIEVVAKATTGREALALAKQHRPDVVLMDINMPDMDGIAATEALLSQVPEAQVIMMSVQGEQDYLRRAMLAGAREFLPKPIGAEELYSAIRHVYRLATTQRRYVTTPPQGPGGSGDDQGAQGQIIAVFSPKGGTGTSSIACNLAVAMRLLTGKKVALVDGNLTFGDVGVIMNLVSSKTIADLVNRISELDRDLLNDVMATHATQVKVLLAPPNPQTGELVTSDHLRTILETMKKEFEYVIVDTQASFQDRALAALDLADRIVALMTLELPCIKNIKLFLEVAELLEYPKEKTVLVLNKADNRLGMRVENVEANIQHKVALQIANAGHEMTLAVNQGVPLVIAKRDLPTSKDIYALAKLLSSGLAAKTADAAKKTEKAPEKTGLFGKLMARR
>NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein
MSLLKRIGATSGATGQLPGTPATPAAPARLGTPPAQRREEDNSVIELRQRVQQRLINELDPKLDLSNVARVRQQVEEIFNTILDSENIVLSRSERARLFESIAADILGFGPLQELLNDPEISEIMVNGPKKVYVEKRGKIQLTDVTFVDEQHVLRVIDRIVAPLGRRIDESSPMVDARLPDGSRVNAVIRPIALCGPTISIRKFRKEGITIDDLIRFGSLTSEMAEFLSACVRASLNIVVSGGTGSGKTTMLNVLSSFIPDDERIITVENAAELQLRQEHVVPLESRPPNVEGKGEISIRDLVINTLRMRPERIVVGECRGGEALEMLQAMNTGHDGSMTTLHANSPRDAIARIETMCLMAGMDLPVRAIREQIASAVNLIVQLARLKDGSRKVIYITEVQGMEGDVVVLSDIFVFEQQGLDERGKIIGQLKPTGIRPRFIDRFEERNIYLPPNIFGYGSSFI
>NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein
MPIVADPTQLIAPVGIFLAILAVFAFLASRSASNPSYEERLTQFAGRRADQQQRTAKEQLREIDKVVARGKRGSETARNLARADLKLTVTEFYMIKLLAAGVGAVVGAFIGRASWEAQLLSGIVGFALFSFLPDLYVGYAAKQRVTKFNAQLGDTINMLANSLRSGYSLLQSMELVSREAPEPTASEYRRVVQEVGLGLRTEDALDNLLKRVPSEDLDLLITAVKIQMESGGNLAQILDTIGHTIRERIRIKGEIAVLTAQGRISAYVITGLPIGLAIFITVINPNYMAPMFSFGMPPEHWCCLPVAGIVMIVIGFFAIMKIVDIEV

Crispr_ID: NC_009523_29

• CRISPR_ID: NC_009523_29
• CRISPR_location: 1563315-1563485
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 3 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NC_009523_29

Consensus_repeat	Method
TTCAACGTTCAACCTTCAACGTTCAAC	CRISPRCasFinder

spacers of NC_009523_29

>29.1|1563342|18|NC_009523|CRISPRCasFinder
AGCGTTCAACGTTCAAGG
>29.2|1563387|22|NC_009523|CRISPRCasFinder
CCCCAACCTTCAACCTTCAACC
>29.3|1563436|22|NC_009523|CRISPRCasFinder
CTTCAACCTTCAACCCCAAACC

CRISPR arrays and Neighbor proteins around NC_009523_29

CRISPR arrays

The CRISPR arrays of NC_009523_29

>merge|NC_009523|29|1563315-1563485|CRISPRCasFinder
AACAACGTTCAACGTTCAAGGTTCAATAGCGTTCAACGTTCAAGGTTCAATGTTCAGGGTTCCACCTTCAACCCCCAACCTTCAACCTTCAACCTTCAACCCCCAACCTTCAACCCCCAACCTTCAACCTTCAACCCCAAACCTTCAACCCCCAACCTTCAACCTTCGCGT

>NC_009523|29|26|1563315-1563485|CRISPRCasFinder
AACAACGTTCAACGTTCAAGGTTCAAT	AGCGTTCAACGTTCAAGG
TTCAATGTTCAGGGTTCCACCTTCAAC	CCCCAACCTTCAACCTTCAACC
TTCAACCCCCAACCTTCAACCCCCAAC	CTTCAACCTTCAACCCCAAACC
TTCAACCCCCAACCTTCAACCTTCGCGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|214621
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|376518
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	unknown	unknown	gnl|CDD|274472
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	unknown	unknown	gnl|CDD|276965
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	unknown	unknown	gnl|CDD|224033
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	unknown	unknown	gnl|CDD|349765
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	unknown	unknown	gnl|CDD|227300
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	unknown	unknown	gnl|CDD|379721
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	unknown	unknown	gnl|CDD|214807
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	unknown	unknown	gnl|CDD|238703
NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224046
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	unknown	unknown	gnl|CDD|234777

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	1.7e-71	236.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	gnl|CDD|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	6.56682e-06
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	gnl|CDD|376518	pfam01297, ZnuA, Zinc-uptake complex component A periplasmic. ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host.	7.25074e-70
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	gnl|CDD|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	1.11502e-14
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	gnl|CDD|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	4.89378e-08
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.29634e-44
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	gnl|CDD|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	4.51948e-71
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	5.26967e-160
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	5.17779e-46
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	gnl|CDD|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	4.46398e-05
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	gnl|CDD|214807	smart00758, PA14, domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.	6.19356e-18
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	gnl|CDD|238703	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. .	2.79067e-92
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	2.10495e-41
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.7755e-59
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	4.53581e-13
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	2.69568e-105
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.53089e-16
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	1.17761e-111

Protein sequences

>NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta
MPPLTQSVVLQPLIVPNDVGIDALHRGKIERYSFARISNAIELPKLIETQLNSFEWFRKEGLRELFEEISPITDFTGKNMELRFLDYHFGEPRYNEHECRERGITYSAPIRVNVQLRILSTGELKESEIFLGDFPLMTENGTFVINGAERVVVSQLIRSPGVYFKEEKDPTSGRSLHSAKLIPSRGAWLEFETNKRDVISVKVDRKRKIPVTILLRAVLGWRANPDGSGQWAPDNELDQRGRDEEILELFAHLETGDHQYIKATLDKDPARHAKEALLELYKRLRPGDPPTLDNARNLIEALLFNPRRYDLSRVGRYKLNKNLWEKDTRPEVRRQAPDVKVRVLLPDDIFKIVERMIQLNNGTPGLRADDIDHLGNRRVRTVGELIQQQFRVGLLRMERVIKERMSLQDPETATPNALVNIRPVVAAMREFFGGAQLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHHSHYGRICPVETPEGPNIGLIGTMSTYARVNEMGFLETPYRKVYREVPNASEWERQGLLLRDVRDLRTGELIAVRGTRVDAAVARRIAVALLRGQILREDVVDPTTGEVIAHAGQEVNRALAERIVETPLKIIKIRPVVSQEVDYLSADEEDRFVIVQANAPLDEHNRFLEGTVSVRYAGDFDDVPIERVDYMDVSPKQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGMEYVAARDSGQVVVAKADGVVLSATADEIVILEDDGNERSYRLRKFMRSNQDTCINQRPIVSRGQRVRKGDIIADSSSTDNGELALGQNVLVAFMPWEGGNFEDAILVSERLVREDIFTSIHIEKYEVEARDTKLGPEEITRDIPNVGQDSLRNLDDRGIIYIGAEVQPNDILVGKITPKGETDLTAEERLLRAIFGEKAREVKDSSLRVPNGVRGKVIDVKVFTRDDDVELPVGVNQRVDVLLCQKRKISAGDKMAGRHGNKGVVSRILPIEDMPFLPDGTPVDIILNPIGVPSRMNIGQILETHLGWAAARLGYRVATPVFDGATETEIKEWLKRADLPPDGKITLYDGRTGEAFDRPVTVGYIYMMKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRVKTYEAIVKGEPIQEAGVPESFKVLIKELQSLGLSVEVLSADETPVELTDDADSDLAALDGINLSGMERGEF
>NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'
MLEINDFSAIRISLASPEDILSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWECYCGKYKRVRYKGVVCDKCGVEVTRSKVRRERMGHISLASPVSHIWFVKGTPSRLGLLLDISPRNLERVLYFASYMIVHVDEELKAQAREALQAEYREKRERIQQEAESKQIELSTQLTQDLGGMESAQITTQRRIEEEYRRLRDEISAEAERLRSDLEEKQGEAAEEDILFRGTVLIEEGEIITEKTLDALDELLDQELETLEQRKQRDLEDAEQLTGAERERKEYEASQERERLQERLQSELDRLVREEKERLEQIDSIKLKRILSEQEYRALREIAPGVFRADMGAGAVRDMIVRTIDLDKLAEELQNEVYTTQGQRRKKATKRLRVVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPEIIVRNEKRMLQEAVDALIDNGRRGRAVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKKMALELFKPFVMRRLVEKGFAHNIKSAKRIVERVRPEVWDVLEEVIKDYLVLLNRAPSLHRLSIQAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARMRMLSKYNLLSPATGDPIITPSQDIVLGCYYLTMVKDGAKGSGKMFASIDEALLAYDKGLIDIQAPIFVRMTGTVYGESDRPVRMLSPDENGAPRMLLETTIGRIIFNNELLEPLRFRNRLIAKKGLREIIADCYKYYTNLNNLTEADLDTIRAMYGDRPRDDLARYFGSEMTASQADRIKTLGFRYATRGGMTIGVDDIEIPPKKQDILAEAEKRVTEVERQFRRGLITEEERYREIVEIWQNATKQTTEAVKQHLNPFGPVAMMVNSAARGNINQLSQMAGMRGLMSDPTGRIIELPIKSNFREGLSVLEYFVSTHGGRKGLADTALRTADAGYLTRRLIDVAQDNIVTIDDCGTDEGLWIYRADDREVLQDFEQRILGRLLAAPLVDPRTGEILANRNDEIDEALVRKCKELAIDAVYVRSPLACKADYGICRMCYGRNLATGKLVDIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRVQEIFEARTPKGKAILAEIDGIVELVREDEVRKIRVVATELYTDDHELPPHYEPVVADGAQVNEGDVLAQSNRADLNGEPIVARIAGVVRIGAGQISVINEEREVREVVAPHTARLAPGIENGARVVAGQHLTEGSADPQELLALQGREAVQRYLVNEAQKVYRSQGVDINDKHIEVIVRQMLRRVRIEEPGDTDYLPGELIDSTEFVRKNAEIISQGGEPATASTMLLGITKASLTTDSFLAAASFQETTRVLTEAAITGKVDYLRGLKENVVIGKLIPAGTGIEKRRQLAEEIIGELANVAPATSTAVVEQERPDREADEALRRRLRALIGGDGDDGERNNGDFDDQVGEDVVIPPDDDDQEA
>NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein
MSLIAGNLGVVQRTLDACHLAWAVCAGAAAHLYGNRRPIQDIDILIEPGKLSEVVRLLDRQQKVVQFDGQRILWRGIKIFDDLTIRRGRDVYPFVLDADMRSRVRRLPLLGSLVPVLSPEDVLVHKALLARGPEEGKHDIADATAIARRQMLDLDYIQRRLALMRVNGAATNMLARVGVNLSTGG
>NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase
MKLRGPRVLIRPWESHDDDVADTWPPYNDPFDPLWNLPRPSSFGGSVWHTFLENGARRQSWAVEDAGGALIGRISLREIDRQRRQARLGVTFAAPYVGRGLGTEALTLFLDYYFGALDYRLLVLDVAAPNVRAVRCYTRLGFRYVESDWRNVGVLFDRRVLDQPMYAPLRRHFRDDMRGLKVEFFEMRLCREEWIQRRAPVGLQG
>NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR
MTLTLPDDVLYRLINARRVVALTGGGVAAESGIPSFREAHTGHWAQYDVSELATPQAFVRNPRLVWEWYAYRRMLAERAQPGVTHYALVDLEQHYPAFTLITQSIDGLHWRAGSRDLIELNGSLRRCRCFESGHIAFAWDDDGEIPPRCVQCGSLLRPDVVMFGEGLPHHELRRARQAVEQCDVFLCVGTVGAIEPVASFPFVARRHGAFVMTIAPEDSIYTLMADYVIAAQPGVIASELVRLIVGDVGGLEELQADAL
>NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase
MEIPDTLIERLRKARCVAVLTGAGVSAESGVPTFRNAQTGLWARYDPGELASPAAFRANPALVWQWYAYRRSLVAAAEPNPGHIALAELERRIADFTLITQNVDGLHHRAGSQNVVELHGNLNRYRCFADDEPVELTTVPQDAPPPCPRCGGLVRPDVVWFGELLPPRAWRVAVAAARRCELFLCVGTSGVVHPAADLPLIARSAGAYTVEINIAPGALNGLLDLHLYAPSGHMLPALAAAAFGNAP
>NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein
MAQSPTPTAPVLHNRYRIDERLGATRLAVVYRAYDERLQRRVLVAMLRKELIDQEPLRRRFVTEAQFGARHLHPSLLHVYDSGEVAGRPFMVTEYVSGRTLREFGPLTVEVALLYFRQIVGAVAACQAAGAPHPPISSANVVLVNEGHVELIENWSMTPAESGLDVAAYRAPERASGQPPTASSVVYSLGLLLIEMLTGRRVVEGADLDGILQAQRNLALPTLSALRSHIYLPSLARLLARATAPDPLQRFPDALALSQALDEVWRSVSRDTDRLASPKHPDPVGERASAAAPHLNIRPAPSAPVPSPSPAAPVTTIDTNQLMLQSARRRSLAALIAMVALFVLVGSGAYVLTSLALEGLTSIRLPRPQVSLPEGITLPDWLTGVADGSGEVLIVTIGDVEGLNLRAEPGLNTRIIGLLPNGTRVRKLEGPRTVDNVPWVRVRGEINGQPVEGWVSQLFVRTG
>NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein
MLTRFFALMIIVVLALSACGGAQPAPSGGASPTVAPAAPTVAPAAPTVAPTTPPVAMAPALNVLAVQSFLADIAQNVAGDRLKVEALIPLGVDPHIFEPTPADVRKVADSDVLIINGAGFEEFLASLLENAGGERLVIEASKGLSSRTAREGEVAVMSPEELTDALCVEAADLFLAAEEITAGAERASAVELGAHAEKEADHGHDHDHEHAHDHGGMFWQVMLNRQADGTYAGFLKWDAEGGEIAIATGDGALVVTGIDTGAALDAEETLTLNCSGLTQAMIMDVEKGEYLLALTGFRAPQATLMIGTPGGHHHHDEGDPHFWLDPMNVVTYVANIRDGLISVDPAGAEVYRANAERYIAQLNELDRFIASEVAAIPEANRKLVTNHESFGYFADRYGFRIIGTIVPGVTTGASPSAQQLARLTERVRDAGVKVIFLETGANPQLAEQLARETGITIVSDLYTHSLSEADGPAPTYIDMMRYNVKRIVEALKQG
>NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein
MNTPHIEQEPAHLEIERLTVAYGRRRVLDDISFRVEYGERVVLVGPNGAGKSTLFKALVGLVKPQSGTIRIHGLPPGAHTDCVAYVPQREDVDWRFPVTVADVVMMGRFGRLGWLRRPTRADHAAVERGMELMGVAHLARRPIGELSGGQQQRVFLARALAQEPHILLLDEPFTGVDAATQEATLSVLDALSDQKVTIILSTHDLGLAAARFERVLLINRRLIGDGPPVRVLSRGPLAEAFGGQVLTLPDGSVLVDQCACHQSEPESIVVK
>NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease
MNTLWSWIVAPLAYGFMQRGMLAAVLVGILCAIIGCYVVLRSMAFLGDALAHAVLPGVAIAYLMGANLLMGALAAAVVVALLISLFSRQGTIKEDTAIGIVFAAALALGVALISSVRTYAVDLTHIMFGNVLGVSPTDVWLIAGIGAAVLLTVLAFYRQFLVIAFDPVLAATQRLPVERLRMLLLLLIALTIVVSLQTVGVGLVAAMLVTPGATAYLLTRRLPAMMMVAALIGAVASISGLYLSYYVNIASGAAVVLVATALFTAVFLFAPERGVVWRRG
>NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein
MPRRSTGQSLVEMALIAPILFALLFAIVDLGYYIWGYSTLFSAARAGAEAASQLPPYQSRLALRAQGDPRWLDDPCVNRILEVTNDSTGFFPVDVNQVTILYPNSADPNPRRLGGVIEVQIDYVIEPLTPLVSFINTMLGDNGTMRIKVTAQRTIESLGNNPNFANGIACTEPTP
>NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase
MARRFQSGQALVEFVIASTLILLLLAAAVDIGLLFFNMQGLTTAAQEGATYGSRYVIVRSDGAVDLDYDMIRTRVRQEAGTTGGINFVNMYDLNSDAIPDAADTNGDGVLDQFQYFLDQNGDGRAIGDPVTGLIPAGTEPSGYVRLIDHYILVQAIEDVFPFNGNPLGPEDADGNRANDLAPDVDTTPCANLADPNRQCYVFVIVKSDYNTVFGFTPAFGDKVPLSSRFVMPLRAGFVSPGAPTNPPVVQTNTPTPTPTNTPTPTATNTPTRTPTNTASPTTTNTPTNTRTPTNTPTRTNTPTRTNTPTPSNTPTRTPTFTPTATPCAGGTGNGLRGDYFIYTPGSSVGTTNFFPGAPVASRTENINMAQNNNSPITGVGNNYFSVRWTGQVEPLFSGEYTFFADTDDGVRVWVNGVQIINDWRTKSGEANGRITLTACQRVSITVEYFEWTGNQRAILSWSHANQPKQVIPVARLYSSGAPPATATRTLTPSRTPTFTPSNTPRPTNTPTPSNTPRPTNTPTRTNTPTNTPPATNTPTRTPTFTPTRTPTFTPSLTPSNTPTRTPTFTPTRTPDTGT
>NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein
MKQRFYHKTEGQNVVLIAGILALLIGMAALAVDLGVTYAEQRNIVRGTNAASLAGMNRLISGGRDTDVARAIYESLRSNGIPVTPPGEAPQPGDRSFEAIYLGSDGAPIPGACSRVGACGSQRPEGVKYIQIRLDGEVETYFARLFGQSQLPVGATAYASVGACATGYYPFGVRSTVGGQPVFDEYGFVNYDGFYEDETYAQLRYQRLYLRDGNNPNGGFSLLRWRNNTPAGNAGALAEMLTGDGTYSQGYAEAPWPEIIQGSDGPTRPDSYPFEPNAINAGDWVYGNVFSGNPFNQQVLNQLDTLKRNRTLMTLPMYRFDNGNLTNPAYYIERFGAFLLVNYGVDNDGRAPDGPWMELAYVREGGQCANLVTGAPPTNNFTVGGSVTYLPRYRTYPDLNRPVQFLLILDVSGSMSWTFDGRGVQNGQVVTCTNPTQGCVSIETAWPNVQERRIYTAKQVLRRFVQQIDQDRRSGLRPHDTVRMVTFTGRLGNYVNNEGRVGDNNRALNDLTDVLPAGWTNDRATLEAAINEAGMVDGDPYMTAGATPSAVAFARASQVFAAAPERAPNGMKYRRVVIFVTDGVANVLRNGMQNNYGPGCELGAENVGCQMGDPLPDGSLRPLNAMVAEAQALKEAYIRPSDGSVYVVALSPTFETTGLNLVASQPDYVKRADMPDQLQQIFDDIQVSAIQGDCTPAQGEERDSMAPSEVPTDLRPELTDRIVGKVTLTDANNNTREAWITADPITRKLSYALTNVPPGQYTLRAWLGYRAPQDNISRDKYELIVRGPSTSAEIPVTVSAGRSLGGVIGVPLKLDLNDNVCPTP
>NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQRAHWYAAINVEIEPPEHKHPRESVGIDVGIKTLAVLSDGVQYENQVLLRSRLRKLKRLNRELSRRQEGSGRWNRTRKKLVKLHRRIANKRLDYTHKMTTRIARTYRIIGVEDLNVPGMLRNRRLALSIADARFGETQRQLRYKSEWYGGILVEVDRFFPSSRLCPMCGGIKSDLTLRDRMFICACGYTADRDVNAAQNIEREALRLMNRGRSGFTDSLNGRGQDIRPLEAIPDEASKWPKKGGLPDLLWFR
>NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase
MTRMTRMPATVRALTLVVALLTVLAILPPAPVAASVIKVVALDDTQPEFGAGSRTLTAVIPTTLSNDPISGQVTEPYAGAKPGDQGGLAMAAIRALRWGAIPDSPLPAARTEIGAAVIGNTIWVVGGSSGGTVPTYHDTVYRGTVNTNYGQPGAGVISWTTSISLPSVSHADTSPFNNNPLAPRTNAAVAALRTGGNAGYLYVIGGAVAPGSTFSSNSVIVGDVDANGNLTWRTSPTYKLPPGVGLEGARAFVHTTAAGKTFLYVVGGRNDPPGAPPPTLSNRVYYAEINPSNGNLNLGGDNRTWQFVTMPSSVWNTAVTVGRYTSADGTLTQDLFFIYGGGTNAGIENMDTGTVWKGVINPTTGAITWEDSTTGGNAVIPGNRNSHGAVEFNGAIYLIGGRSGGTINRNGYASYVDPANLRIFKDGALNFYQDDFGALPFAANPGRRNAGVVLVPTSNPNYAFAYLIGGTDGTAPSSQVFRATIGPNLDDQTFYPPTGYYYSKPFSMLDLINEQQATVRKMTWLTNIDPANGGDIEVEYRVYSPSSGNCADTEGGWTQARDPDAGGTRFSKFNPSGAAYAINAQEYSESQLLPPGNCFQYRLTFRRGSVQNASPVLLRLGMEVIVPGNPDLNWPVNAVTTTQNANGTTRGVEVRLRNQNLTDSGPTQPANVCHASQPGCNPEGTFFVDVFIFPPGVTPISPTLPLFAPGGDSLSNPALAPYHRACLQIPKWVMQKDTTFLIAETFRWSDIKTVGIDGCVSAATNASNGTGKILRDFLDQGSGTYKVILVADTHTDLKGLVYESDVPSGDHVAERNNVSAIFDVVFVAGGAPPPPDSGPQPPPDNPPPDNGIRRVFLPLVTR
>NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein
MKPRLSGRFAPGDRLGGRRGSVHAGGRPAKSLPEAISIAERQAAE
>NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA
MRRGGLLLLLGVIIAAAAALLFFFFFQTPPTPVPEALPQEPTPVPLRKVVAARVDIPANTVLTDTETFLTLRDIPEPEYNAAPDQYFTSVNELTTKVTLRALNATEIIRARDLTEAGLSFQVPLPDSPDTPRDKVFPLEVGNLTGVADQIRPGDAVDLVMTYEIRRLIIRPSLTLDPETGQLVVTPLEETLVDRVTKTMVQNVRVLRVLKPAIPQEAGTPTPAGQQGTAPPPPPSSTQTPDTFVPGAQWILLLAMTDQEAEIVKFTLDQQDPKPQITLVLRGRDDSAIEDTTGITLRLLTSRYGLPLPEPLQPLAIAPEEITPGPARPTPTPLPVPFP
>NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein
MAGGSRTPEAAGPAKIRVMIVDDIAETRDNLEKLLFFEKDIEVVAKATTGREALALAKQHRPDVVLMDINMPDMDGIAATEALLSQVPEAQVIMMSVQGEQDYLRRAMLAGAREFLPKPIGAEELYSAIRHVYRLATTQRRYVTTPPQGPGGSGDDQGAQGQIIAVFSPKGGTGTSSIACNLAVAMRLLTGKKVALVDGNLTFGDVGVIMNLVSSKTIADLVNRISELDRDLLNDVMATHATQVKVLLAPPNPQTGELVTSDHLRTILETMKKEFEYVIVDTQASFQDRALAALDLADRIVALMTLELPCIKNIKLFLEVAELLEYPKEKTVLVLNKADNRLGMRVENVEANIQHKVALQIANAGHEMTLAVNQGVPLVIAKRDLPTSKDIYALAKLLSSGLAAKTADAAKKTEKAPEKTGLFGKLMARR
>NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein
MSLLKRIGATSGATGQLPGTPATPAAPARLGTPPAQRREEDNSVIELRQRVQQRLINELDPKLDLSNVARVRQQVEEIFNTILDSENIVLSRSERARLFESIAADILGFGPLQELLNDPEISEIMVNGPKKVYVEKRGKIQLTDVTFVDEQHVLRVIDRIVAPLGRRIDESSPMVDARLPDGSRVNAVIRPIALCGPTISIRKFRKEGITIDDLIRFGSLTSEMAEFLSACVRASLNIVVSGGTGSGKTTMLNVLSSFIPDDERIITVENAAELQLRQEHVVPLESRPPNVEGKGEISIRDLVINTLRMRPERIVVGECRGGEALEMLQAMNTGHDGSMTTLHANSPRDAIARIETMCLMAGMDLPVRAIREQIASAVNLIVQLARLKDGSRKVIYITEVQGMEGDVVVLSDIFVFEQQGLDERGKIIGQLKPTGIRPRFIDRFEERNIYLPPNIFGYGSSFI
>NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein
MPIVADPTQLIAPVGIFLAILAVFAFLASRSASNPSYEERLTQFAGRRADQQQRTAKEQLREIDKVVARGKRGSETARNLARADLKLTVTEFYMIKLLAAGVGAVVGAFIGRASWEAQLLSGIVGFALFSFLPDLYVGYAAKQRVTKFNAQLGDTINMLANSLRSGYSLLQSMELVSREAPEPTASEYRRVVQEVGLGLRTEDALDNLLKRVPSEDLDLLITAVKIQMESGGNLAQILDTIGHTIRERIRIKGEIAVLTAQGRISAYVITGLPIGLAIFITVINPNYMAPMFSFGMPPEHWCCLPVAGIVMIVIGFFAIMKIVDIEV

Crispr_ID: NC_009523_30

• CRISPR_ID: NC_009523_30
• CRISPR_location: 1564684-1564857
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 3 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NC_009523_30

Consensus_repeat	Method
TTCAACGTTCAACCTTCAACGTTCAAC	CRISPRCasFinder

spacers of NC_009523_30

>30.1|1564711|22|NC_009523|CRISPRCasFinder
GTTCAACCTTCAACGTTCAACC
>30.2|1564760|22|NC_009523|CRISPRCasFinder
CTTCAACGTTCAACGTTCAACC
>30.3|1564809|22|NC_009523|CRISPRCasFinder
CTTCAACCTTCAACGTTCAACG

CRISPR arrays and Neighbor proteins around NC_009523_30

CRISPR arrays

The CRISPR arrays of NC_009523_30

>merge|NC_009523|30|1564684-1564857|CRISPRCasFinder
CGGTGAGTTCAACGTTCAACCTTCAACGTTCAACCTTCAACGTTCAACCTTCAACGTTCAACCTTCAACCTTCAACCTTCAACGTTCAACGTTCAACCTTCAACCTTCAACGTTCAACGTTCAACCTTCAACCTTCAACGTTCAACGTTCAACAGGTAACCTTCAACCTTCAAC

>NC_009523|30|27|1564684-1564857|CRISPRCasFinder
CGGTGAGTTCAACGTTCAACCTTCAAC	GTTCAACCTTCAACGTTCAACC
TTCAACGTTCAACCTTCAACCTTCAAC	CTTCAACGTTCAACGTTCAACC
TTCAACCTTCAACGTTCAACGTTCAAC	CTTCAACCTTCAACGTTCAACG
TTCAACAGGTAACCTTCAACCTTCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|214621
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|376518
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	unknown	unknown	gnl|CDD|274472
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	unknown	unknown	gnl|CDD|276965
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	unknown	unknown	gnl|CDD|224033
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	unknown	unknown	gnl|CDD|349765
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	unknown	unknown	gnl|CDD|227300
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	unknown	unknown	gnl|CDD|379721
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	unknown	unknown	gnl|CDD|214807
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	unknown	unknown	gnl|CDD|238703
NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224046
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	unknown	unknown	gnl|CDD|234777

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	1.7e-71	236.2	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein	gnl|CDD|214621	smart00327, VWA, von Willebrand factor (vWF) type A domain. VWA domains in extracellular eukaryotic proteins mediate adhesion via metal ion-dependent adhesion sites (MIDAS). Intracellular VWA domains and homologues in prokaryotes have recently been identified. The proposed VWA domains in integrin beta subunits have recently been substantiated using sequence-based methods.	6.56682e-06
NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein	gnl|CDD|376518	pfam01297, ZnuA, Zinc-uptake complex component A periplasmic. ZnuA includes periplasmic solute binding proteins such as TroA that interacts with an ATP-binding cassette transport system in Treponema pallidum. ZnuA is part of the bacterial zinc-uptake complex ZnuABC, whose components are the following families, ZinT, pfam09223, pfam00950, pfam00005, all of which are regulated by the transcription-regulator family FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), a high-affinity zinc-uptake protein. In Gram-negative bacteria the ZnuABC transporter system ensures an adequate import of zinc in Zn2+-poor environments, such as those encountered by pathogens within the infected host.	7.25074e-70
NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA	gnl|CDD|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	1.11502e-14
NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase	gnl|CDD|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	4.89378e-08
NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.29634e-44
NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease	gnl|CDD|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	4.51948e-71
NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	5.26967e-160
NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	5.17779e-46
NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein	gnl|CDD|379721	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase. This family is likely to be an uncharacterized group of nucleotidyltransferases.	4.46398e-05
NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase	gnl|CDD|214807	smart00758, PA14, domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins.	6.19356e-18
NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR	gnl|CDD|238703	cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E. coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity. .	2.79067e-92
NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	2.10495e-41
NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.7755e-59
NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	4.53581e-13
NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	2.69568e-105
NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.53089e-16
NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	1.17761e-111

Protein sequences

>NC_009523.1|WP_011956022.1|1556186_1559876_-|DNA-directed-RNA-polymerase-subunit-beta
MPPLTQSVVLQPLIVPNDVGIDALHRGKIERYSFARISNAIELPKLIETQLNSFEWFRKEGLRELFEEISPITDFTGKNMELRFLDYHFGEPRYNEHECRERGITYSAPIRVNVQLRILSTGELKESEIFLGDFPLMTENGTFVINGAERVVVSQLIRSPGVYFKEEKDPTSGRSLHSAKLIPSRGAWLEFETNKRDVISVKVDRKRKIPVTILLRAVLGWRANPDGSGQWAPDNELDQRGRDEEILELFAHLETGDHQYIKATLDKDPARHAKEALLELYKRLRPGDPPTLDNARNLIEALLFNPRRYDLSRVGRYKLNKNLWEKDTRPEVRRQAPDVKVRVLLPDDIFKIVERMIQLNNGTPGLRADDIDHLGNRRVRTVGELIQQQFRVGLLRMERVIKERMSLQDPETATPNALVNIRPVVAAMREFFGGAQLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHHSHYGRICPVETPEGPNIGLIGTMSTYARVNEMGFLETPYRKVYREVPNASEWERQGLLLRDVRDLRTGELIAVRGTRVDAAVARRIAVALLRGQILREDVVDPTTGEVIAHAGQEVNRALAERIVETPLKIIKIRPVVSQEVDYLSADEEDRFVIVQANAPLDEHNRFLEGTVSVRYAGDFDDVPIERVDYMDVSPKQVVSVSTALIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGMEYVAARDSGQVVVAKADGVVLSATADEIVILEDDGNERSYRLRKFMRSNQDTCINQRPIVSRGQRVRKGDIIADSSSTDNGELALGQNVLVAFMPWEGGNFEDAILVSERLVREDIFTSIHIEKYEVEARDTKLGPEEITRDIPNVGQDSLRNLDDRGIIYIGAEVQPNDILVGKITPKGETDLTAEERLLRAIFGEKAREVKDSSLRVPNGVRGKVIDVKVFTRDDDVELPVGVNQRVDVLLCQKRKISAGDKMAGRHGNKGVVSRILPIEDMPFLPDGTPVDIILNPIGVPSRMNIGQILETHLGWAAARLGYRVATPVFDGATETEIKEWLKRADLPPDGKITLYDGRTGEAFDRPVTVGYIYMMKLAHLVEDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRVKTYEAIVKGEPIQEAGVPESFKVLIKELQSLGLSVEVLSADETPVELTDDADSDLAALDGINLSGMERGEF
>NC_009523.1|WP_011956021.1|1551586_1556101_-|DNA-directed-RNA-polymerase-subunit-beta'
MLEINDFSAIRISLASPEDILSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWECYCGKYKRVRYKGVVCDKCGVEVTRSKVRRERMGHISLASPVSHIWFVKGTPSRLGLLLDISPRNLERVLYFASYMIVHVDEELKAQAREALQAEYREKRERIQQEAESKQIELSTQLTQDLGGMESAQITTQRRIEEEYRRLRDEISAEAERLRSDLEEKQGEAAEEDILFRGTVLIEEGEIITEKTLDALDELLDQELETLEQRKQRDLEDAEQLTGAERERKEYEASQERERLQERLQSELDRLVREEKERLEQIDSIKLKRILSEQEYRALREIAPGVFRADMGAGAVRDMIVRTIDLDKLAEELQNEVYTTQGQRRKKATKRLRVVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPEIIVRNEKRMLQEAVDALIDNGRRGRAVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLHQCGLPKKMALELFKPFVMRRLVEKGFAHNIKSAKRIVERVRPEVWDVLEEVIKDYLVLLNRAPSLHRLSIQAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARMRMLSKYNLLSPATGDPIITPSQDIVLGCYYLTMVKDGAKGSGKMFASIDEALLAYDKGLIDIQAPIFVRMTGTVYGESDRPVRMLSPDENGAPRMLLETTIGRIIFNNELLEPLRFRNRLIAKKGLREIIADCYKYYTNLNNLTEADLDTIRAMYGDRPRDDLARYFGSEMTASQADRIKTLGFRYATRGGMTIGVDDIEIPPKKQDILAEAEKRVTEVERQFRRGLITEEERYREIVEIWQNATKQTTEAVKQHLNPFGPVAMMVNSAARGNINQLSQMAGMRGLMSDPTGRIIELPIKSNFREGLSVLEYFVSTHGGRKGLADTALRTADAGYLTRRLIDVAQDNIVTIDDCGTDEGLWIYRADDREVLQDFEQRILGRLLAAPLVDPRTGEILANRNDEIDEALVRKCKELAIDAVYVRSPLACKADYGICRMCYGRNLATGKLVDIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRVQEIFEARTPKGKAILAEIDGIVELVREDEVRKIRVVATELYTDDHELPPHYEPVVADGAQVNEGDVLAQSNRADLNGEPIVARIAGVVRIGAGQISVINEEREVREVVAPHTARLAPGIENGARVVAGQHLTEGSADPQELLALQGREAVQRYLVNEAQKVYRSQGVDINDKHIEVIVRQMLRRVRIEEPGDTDYLPGELIDSTEFVRKNAEIISQGGEPATASTMLLGITKASLTTDSFLAAASFQETTRVLTEAAITGKVDYLRGLKENVVIGKLIPAGTGIEKRRQLAEEIIGELANVAPATSTAVVEQERPDREADEALRRRLRALIGGDGDDGERNNGDFDDQVGEDVVIPPDDDDQEA
>NC_009523.1|WP_011956020.1|1550747_1551305_+|hypothetical-protein
MSLIAGNLGVVQRTLDACHLAWAVCAGAAAHLYGNRRPIQDIDILIEPGKLSEVVRLLDRQQKVVQFDGQRILWRGIKIFDDLTIRRGRDVYPFVLDADMRSRVRRLPLLGSLVPVLSPEDVLVHKALLARGPEEGKHDIADATAIARRQMLDLDYIQRRLALMRVNGAATNMLARVGVNLSTGG
>NC_009523.1|WP_011956019.1|1550031_1550649_+|GNAT-family-N-acetyltransferase
MKLRGPRVLIRPWESHDDDVADTWPPYNDPFDPLWNLPRPSSFGGSVWHTFLENGARRQSWAVEDAGGALIGRISLREIDRQRRQARLGVTFAAPYVGRGLGTEALTLFLDYYFGALDYRLLVLDVAAPNVRAVRCYTRLGFRYVESDWRNVGVLFDRRVLDQPMYAPLRRHFRDDMRGLKVEFFEMRLCREEWIQRRAPVGLQG
>NC_009523.1|WP_011956018.1|1549230_1550010_+|sigma-factor-regulator-FecR
MTLTLPDDVLYRLINARRVVALTGGGVAAESGIPSFREAHTGHWAQYDVSELATPQAFVRNPRLVWEWYAYRRMLAERAQPGVTHYALVDLEQHYPAFTLITQSIDGLHWRAGSRDLIELNGSLRRCRCFESGHIAFAWDDDGEIPPRCVQCGSLLRPDVVMFGEGLPHHELRRARQAVEQCDVFLCVGTVGAIEPVASFPFVARRHGAFVMTIAPEDSIYTLMADYVIAAQPGVIASELVRLIVGDVGGLEELQADAL
>NC_009523.1|WP_011956017.1|1548440_1549184_+|NAD-dependent-deacylase
MEIPDTLIERLRKARCVAVLTGAGVSAESGVPTFRNAQTGLWARYDPGELASPAAFRANPALVWQWYAYRRSLVAAAEPNPGHIALAELERRIADFTLITQNVDGLHHRAGSQNVVELHGNLNRYRCFADDEPVELTTVPQDAPPPCPRCGGLVRPDVVWFGELLPPRAWRVAVAAARRCELFLCVGTSGVVHPAADLPLIARSAGAYTVEINIAPGALNGLLDLHLYAPSGHMLPALAAAAFGNAP
>NC_009523.1|WP_011956016.1|1546821_1548213_+|SH3-domain-containing-protein
MAQSPTPTAPVLHNRYRIDERLGATRLAVVYRAYDERLQRRVLVAMLRKELIDQEPLRRRFVTEAQFGARHLHPSLLHVYDSGEVAGRPFMVTEYVSGRTLREFGPLTVEVALLYFRQIVGAVAACQAAGAPHPPISSANVVLVNEGHVELIENWSMTPAESGLDVAAYRAPERASGQPPTASSVVYSLGLLLIEMLTGRRVVEGADLDGILQAQRNLALPTLSALRSHIYLPSLARLLARATAPDPLQRFPDALALSQALDEVWRSVSRDTDRLASPKHPDPVGERASAAAPHLNIRPAPSAPVPSPSPAAPVTTIDTNQLMLQSARRRSLAALIAMVALFVLVGSGAYVLTSLALEGLTSIRLPRPQVSLPEGITLPDWLTGVADGSGEVLIVTIGDVEGLNLRAEPGLNTRIIGLLPNGTRVRKLEGPRTVDNVPWVRVRGEINGQPVEGWVSQLFVRTG
>NC_009523.1|WP_011956015.1|1545045_1546530_-|zinc-ABC-transporter-substrate-binding-protein
MLTRFFALMIIVVLALSACGGAQPAPSGGASPTVAPAAPTVAPAAPTVAPTTPPVAMAPALNVLAVQSFLADIAQNVAGDRLKVEALIPLGVDPHIFEPTPADVRKVADSDVLIINGAGFEEFLASLLENAGGERLVIEASKGLSSRTAREGEVAVMSPEELTDALCVEAADLFLAAEEITAGAERASAVELGAHAEKEADHGHDHDHEHAHDHGGMFWQVMLNRQADGTYAGFLKWDAEGGEIAIATGDGALVVTGIDTGAALDAEETLTLNCSGLTQAMIMDVEKGEYLLALTGFRAPQATLMIGTPGGHHHHDEGDPHFWLDPMNVVTYVANIRDGLISVDPAGAEVYRANAERYIAQLNELDRFIASEVAAIPEANRKLVTNHESFGYFADRYGFRIIGTIVPGVTTGASPSAQQLARLTERVRDAGVKVIFLETGANPQLAEQLARETGITIVSDLYTHSLSEADGPAPTYIDMMRYNVKRIVEALKQG
>NC_009523.1|WP_011956014.1|1544233_1545049_-|metal-ABC-transporter-ATP-binding-protein
MNTPHIEQEPAHLEIERLTVAYGRRRVLDDISFRVEYGERVVLVGPNGAGKSTLFKALVGLVKPQSGTIRIHGLPPGAHTDCVAYVPQREDVDWRFPVTVADVVMMGRFGRLGWLRRPTRADHAAVERGMELMGVAHLARRPIGELSGGQQQRVFLARALAQEPHILLLDEPFTGVDAATQEATLSVLDALSDQKVTIILSTHDLGLAAARFERVLLINRRLIGDGPPVRVLSRGPLAEAFGGQVLTLPDGSVLVDQCACHQSEPESIVVK
>NC_009523.1|WP_011956013.1|1543394_1544237_-|metal-ABC-transporter-permease
MNTLWSWIVAPLAYGFMQRGMLAAVLVGILCAIIGCYVVLRSMAFLGDALAHAVLPGVAIAYLMGANLLMGALAAAVVVALLISLFSRQGTIKEDTAIGIVFAAALALGVALISSVRTYAVDLTHIMFGNVLGVSPTDVWLIAGIGAAVLLTVLAFYRQFLVIAFDPVLAATQRLPVERLRMLLLLLIALTIVVSLQTVGVGLVAAMLVTPGATAYLLTRRLPAMMMVAALIGAVASISGLYLSYYVNIASGAAVVLVATALFTAVFLFAPERGVVWRRG
>NC_009523.1|WP_011956024.1|1565014_1565542_+|pilus-assembly-protein
MPRRSTGQSLVEMALIAPILFALLFAIVDLGYYIWGYSTLFSAARAGAEAASQLPPYQSRLALRAQGDPRWLDDPCVNRILEVTNDSTGFFPVDVNQVTILYPNSADPNPRRLGGVIEVQIDYVIEPLTPLVSFINTMLGDNGTMRIKVTAQRTIESLGNNPNFANGIACTEPTP
>NC_009523.1|WP_011956025.1|1565565_1567302_+|beta-glucosidase
MARRFQSGQALVEFVIASTLILLLLAAAVDIGLLFFNMQGLTTAAQEGATYGSRYVIVRSDGAVDLDYDMIRTRVRQEAGTTGGINFVNMYDLNSDAIPDAADTNGDGVLDQFQYFLDQNGDGRAIGDPVTGLIPAGTEPSGYVRLIDHYILVQAIEDVFPFNGNPLGPEDADGNRANDLAPDVDTTPCANLADPNRQCYVFVIVKSDYNTVFGFTPAFGDKVPLSSRFVMPLRAGFVSPGAPTNPPVVQTNTPTPTPTNTPTPTATNTPTRTPTNTASPTTTNTPTNTRTPTNTPTRTNTPTRTNTPTPSNTPTRTPTFTPTATPCAGGTGNGLRGDYFIYTPGSSVGTTNFFPGAPVASRTENINMAQNNNSPITGVGNNYFSVRWTGQVEPLFSGEYTFFADTDDGVRVWVNGVQIINDWRTKSGEANGRITLTACQRVSITVEYFEWTGNQRAILSWSHANQPKQVIPVARLYSSGAPPATATRTLTPSRTPTFTPSNTPRPTNTPTPSNTPRPTNTPTRTNTPTNTPPATNTPTRTPTFTPTRTPTFTPSLTPSNTPTRTPTFTPTRTPDTGT
>NC_009523.1|WP_011956026.1|1567443_1569918_+|VWA-domain-containing-protein
MKQRFYHKTEGQNVVLIAGILALLIGMAALAVDLGVTYAEQRNIVRGTNAASLAGMNRLISGGRDTDVARAIYESLRSNGIPVTPPGEAPQPGDRSFEAIYLGSDGAPIPGACSRVGACGSQRPEGVKYIQIRLDGEVETYFARLFGQSQLPVGATAYASVGACATGYYPFGVRSTVGGQPVFDEYGFVNYDGFYEDETYAQLRYQRLYLRDGNNPNGGFSLLRWRNNTPAGNAGALAEMLTGDGTYSQGYAEAPWPEIIQGSDGPTRPDSYPFEPNAINAGDWVYGNVFSGNPFNQQVLNQLDTLKRNRTLMTLPMYRFDNGNLTNPAYYIERFGAFLLVNYGVDNDGRAPDGPWMELAYVREGGQCANLVTGAPPTNNFTVGGSVTYLPRYRTYPDLNRPVQFLLILDVSGSMSWTFDGRGVQNGQVVTCTNPTQGCVSIETAWPNVQERRIYTAKQVLRRFVQQIDQDRRSGLRPHDTVRMVTFTGRLGNYVNNEGRVGDNNRALNDLTDVLPAGWTNDRATLEAAINEAGMVDGDPYMTAGATPSAVAFARASQVFAAAPERAPNGMKYRRVVIFVTDGVANVLRNGMQNNYGPGCELGAENVGCQMGDPLPDGSLRPLNAMVAEAQALKEAYIRPSDGSVYVVALSPTFETTGLNLVASQPDYVKRADMPDQLQQIFDDIQVSAIQGDCTPAQGEERDSMAPSEVPTDLRPELTDRIVGKVTLTDANNNTREAWITADPITRKLSYALTNVPPGQYTLRAWLGYRAPQDNISRDKYELIVRGPSTSAEIPVTVSAGRSLGGVIGVPLKLDLNDNVCPTP
>NC_009523.1|WP_049767477.1|1570283_1571045_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQRAHWYAAINVEIEPPEHKHPRESVGIDVGIKTLAVLSDGVQYENQVLLRSRLRKLKRLNRELSRRQEGSGRWNRTRKKLVKLHRRIANKRLDYTHKMTTRIARTYRIIGVEDLNVPGMLRNRRLALSIADARFGETQRQLRYKSEWYGGILVEVDRFFPSSRLCPMCGGIKSDLTLRDRMFICACGYTADRDVNAAQNIEREALRLMNRGRSGFTDSLNGRGQDIRPLEAIPDEASKWPKKGGLPDLLWFR
>NC_009523.1|WP_011956027.1|1571070_1573659_+|galactose-oxidase
MTRMTRMPATVRALTLVVALLTVLAILPPAPVAASVIKVVALDDTQPEFGAGSRTLTAVIPTTLSNDPISGQVTEPYAGAKPGDQGGLAMAAIRALRWGAIPDSPLPAARTEIGAAVIGNTIWVVGGSSGGTVPTYHDTVYRGTVNTNYGQPGAGVISWTTSISLPSVSHADTSPFNNNPLAPRTNAAVAALRTGGNAGYLYVIGGAVAPGSTFSSNSVIVGDVDANGNLTWRTSPTYKLPPGVGLEGARAFVHTTAAGKTFLYVVGGRNDPPGAPPPTLSNRVYYAEINPSNGNLNLGGDNRTWQFVTMPSSVWNTAVTVGRYTSADGTLTQDLFFIYGGGTNAGIENMDTGTVWKGVINPTTGAITWEDSTTGGNAVIPGNRNSHGAVEFNGAIYLIGGRSGGTINRNGYASYVDPANLRIFKDGALNFYQDDFGALPFAANPGRRNAGVVLVPTSNPNYAFAYLIGGTDGTAPSSQVFRATIGPNLDDQTFYPPTGYYYSKPFSMLDLINEQQATVRKMTWLTNIDPANGGDIEVEYRVYSPSSGNCADTEGGWTQARDPDAGGTRFSKFNPSGAAYAINAQEYSESQLLPPGNCFQYRLTFRRGSVQNASPVLLRLGMEVIVPGNPDLNWPVNAVTTTQNANGTTRGVEVRLRNQNLTDSGPTQPANVCHASQPGCNPEGTFFVDVFIFPPGVTPISPTLPLFAPGGDSLSNPALAPYHRACLQIPKWVMQKDTTFLIAETFRWSDIKTVGIDGCVSAATNASNGTGKILRDFLDQGSGTYKVILVADTHTDLKGLVYESDVPSGDHVAERNNVSAIFDVVFVAGGAPPPPDSGPQPPPDNPPPDNGIRRVFLPLVTR
>NC_009523.1|WP_157040990.1|1574035_1574173_-|hypothetical-protein
MKPRLSGRFAPGDRLGGRRGSVHAGGRPAKSLPEAISIAERQAAE
>NC_009523.1|WP_011956028.1|1574760_1575777_+|flagellar-protein-FlgA
MRRGGLLLLLGVIIAAAAALLFFFFFQTPPTPVPEALPQEPTPVPLRKVVAARVDIPANTVLTDTETFLTLRDIPEPEYNAAPDQYFTSVNELTTKVTLRALNATEIIRARDLTEAGLSFQVPLPDSPDTPRDKVFPLEVGNLTGVADQIRPGDAVDLVMTYEIRRLIIRPSLTLDPETGQLVVTPLEETLVDRVTKTMVQNVRVLRVLKPAIPQEAGTPTPAGQQGTAPPPPPSSTQTPDTFVPGAQWILLLAMTDQEAEIVKFTLDQQDPKPQITLVLRGRDDSAIEDTTGITLRLLTSRYGLPLPEPLQPLAIAPEEITPGPARPTPTPLPVPFP
>NC_009523.1|WP_011956029.1|1575910_1577203_+|MinD/ParA-family-protein
MAGGSRTPEAAGPAKIRVMIVDDIAETRDNLEKLLFFEKDIEVVAKATTGREALALAKQHRPDVVLMDINMPDMDGIAATEALLSQVPEAQVIMMSVQGEQDYLRRAMLAGAREFLPKPIGAEELYSAIRHVYRLATTQRRYVTTPPQGPGGSGDDQGAQGQIIAVFSPKGGTGTSSIACNLAVAMRLLTGKKVALVDGNLTFGDVGVIMNLVSSKTIADLVNRISELDRDLLNDVMATHATQVKVLLAPPNPQTGELVTSDHLRTILETMKKEFEYVIVDTQASFQDRALAALDLADRIVALMTLELPCIKNIKLFLEVAELLEYPKEKTVLVLNKADNRLGMRVENVEANIQHKVALQIANAGHEMTLAVNQGVPLVIAKRDLPTSKDIYALAKLLSSGLAAKTADAAKKTEKAPEKTGLFGKLMARR
>NC_009523.1|WP_011956030.1|1577229_1578621_+|CpaF-family-protein
MSLLKRIGATSGATGQLPGTPATPAAPARLGTPPAQRREEDNSVIELRQRVQQRLINELDPKLDLSNVARVRQQVEEIFNTILDSENIVLSRSERARLFESIAADILGFGPLQELLNDPEISEIMVNGPKKVYVEKRGKIQLTDVTFVDEQHVLRVIDRIVAPLGRRIDESSPMVDARLPDGSRVNAVIRPIALCGPTISIRKFRKEGITIDDLIRFGSLTSEMAEFLSACVRASLNIVVSGGTGSGKTTMLNVLSSFIPDDERIITVENAAELQLRQEHVVPLESRPPNVEGKGEISIRDLVINTLRMRPERIVVGECRGGEALEMLQAMNTGHDGSMTTLHANSPRDAIARIETMCLMAGMDLPVRAIREQIASAVNLIVQLARLKDGSRKVIYITEVQGMEGDVVVLSDIFVFEQQGLDERGKIIGQLKPTGIRPRFIDRFEERNIYLPPNIFGYGSSFI
>NC_009523.1|WP_011956031.1|1578681_1579665_+|secretion-system-protein
MPIVADPTQLIAPVGIFLAILAVFAFLASRSASNPSYEERLTQFAGRRADQQQRTAKEQLREIDKVVARGKRGSETARNLARADLKLTVTEFYMIKLLAAGVGAVVGAFIGRASWEAQLLSGIVGFALFSFLPDLYVGYAAKQRVTKFNAQLGDTINMLANSLRSGYSLLQSMELVSREAPEPTASEYRRVVQEVGLGLRTEDALDNLLKRVPSEDLDLLITAVKIQMESGGNLAQILDTIGHTIRERIRIKGEIAVLTAQGRISAYVITGLPIGLAIFITVINPNYMAPMFSFGMPPEHWCCLPVAGIVMIVIGFFAIMKIVDIEV

Crispr_ID: NC_009523_31

• CRISPR_ID: NC_009523_31
• CRISPR_location: 1721711-1721816
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_31

Consensus_repeat	Method
CCCTCGGCTAGCCAGGGCGAAGCCCGCCTGCGCGGGCT	CRISPRCasFinder

spacers of NC_009523_31

>31.1|1721749|30|NC_009523|CRISPRCasFinder
GTAGCGGATTATTTATTCAAAGACCATAAT

CRISPR arrays and Neighbor proteins around NC_009523_31

CRISPR arrays

The CRISPR arrays of NC_009523_31

>merge|NC_009523|31|1721711-1721816|CRISPRCasFinder
CCCTCGGCTAGCCAGGGCGAAGCCCGCCTGCGCGGGCTGTAGCGGATTATTTATTCAAAGACCATAATCCCTCGGCTAGCCAGGGCGAAGCCCGCCTGCGCGGGCT

>NC_009523|31|28|1721711-1721816|CRISPRCasFinder
CCCTCGGCTAGCCAGGGCGAAGCCCGCCTGCGCGGGCT	GTAGCGGATTATTTATTCAAAGACCATAAT
CCCTCGGCTAGCCAGGGCGAAGCCCGCCTGCGCGGGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956166.1|1723577_1724516_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133029
NC_009523.1|WP_011956169.1|1726430_1728089_+|peptidase-M9	unknown	unknown	gnl|CDD|366791
NC_009523.1|WP_157040999.1|1734378_1734696_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956165.1|1722737_1723568_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133031
NC_009523.1|WP_041333252.1|1711298_1711574_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956162.1|1717877_1720538_+|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|378217
NC_009523.1|WP_011956161.1|1716876_1717734_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381326
NC_009523.1|WP_011956163.1|1720740_1721295_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_009523.1|WP_011956159.1|1715283_1715835_-|DUF3592-domain-containing-protein	unknown	unknown	gnl|CDD|378822
NC_009523.1|WP_011956157.1|1713918_1714299_-|hypothetical-protein	unknown	unknown	gnl|CDD|376743
NC_009523.1|WP_011956156.1|1713275_1713878_-|RDD-family-protein	unknown	unknown	gnl|CDD|377640
NC_009523.1|WP_011956158.1|1714645_1715197_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157040998.1|1726086_1726425_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956167.1|1724940_1725786_-|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl|CDD|224016
NC_009523.1|WP_157040997.1|1715861_1716104_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041268.1|1732394_1733987_-|hypothetical-protein	unknown	unknown	gnl|CDD|274305
NC_009523.1|WP_011956155.1|1711607_1712918_-|hypothetical-protein	unknown	unknown	gnl|CDD|185285
NC_009523.1|WP_011956173.1|1734815_1735061_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956171.1|1729989_1731237_+|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270410
NC_009523.1|WP_011956164.1|1721900_1722455_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956166.1|1723577_1724516_-|glycosyltransferase-family-2-protein	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	6.42817e-55
NC_009523.1|WP_011956169.1|1726430_1728089_+|peptidase-M9	gnl|CDD|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	1.3029e-12
NC_009523.1|WP_011956165.1|1722737_1723568_-|glycosyltransferase-family-2-protein	gnl|CDD|133031	cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.	1.06181e-80
NC_009523.1|WP_011956162.1|1717877_1720538_+|DUF2029-domain-containing-protein	gnl|CDD|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	2.46254e-06
NC_009523.1|WP_011956161.1|1716876_1717734_-|aldo/keto-reductase	gnl|CDD|381326	cd19100, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein. This family includes a group of uncharacterized AKR superfamily proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	7.49968e-85
NC_009523.1|WP_011956163.1|1720740_1721295_-|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	4.91479e-40
NC_009523.1|WP_011956159.1|1715283_1715835_-|DUF3592-domain-containing-protein	gnl|CDD|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	5.27842e-16
NC_009523.1|WP_011956157.1|1713918_1714299_-|hypothetical-protein	gnl|CDD|376743	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit. This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.	0.00612539
NC_009523.1|WP_011956156.1|1713275_1713878_-|RDD-family-protein	gnl|CDD|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	1.14609e-18
NC_009523.1|WP_011956167.1|1724940_1725786_-|dTDP-4-dehydrorhamnose-reductase	gnl|CDD|224016	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].	2.59865e-100
NC_009523.1|WP_157041268.1|1732394_1733987_-|hypothetical-protein	gnl|CDD|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	8.9709e-08
NC_009523.1|WP_011956155.1|1711607_1712918_-|hypothetical-protein	gnl|CDD|185285	PRK15387, PRK15387, type III secretion system effector E3 ubiquitin transferase SspH2.	1.8358e-05
NC_009523.1|WP_011956171.1|1729989_1731237_+|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|270410	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold. BztA is the periplamic-binding protein component of ABC transporter specific for carboxylic amino acids, glutamine and asparagine. The BZtA domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.09937e-106
NC_009523.1|WP_011956164.1|1721900_1722455_-|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	2.28244e-39

Protein sequences

>NC_009523.1|WP_011956163.1|1720740_1721295_-|Uma2-family-endonuclease
MSSATMTITAEELERMALGEQRVELVRGEVITMAPAGAEHGETAMNLGALIHAFARERGAGVTYAAETGFVLARNPDTVRAPDVAFVTAERAAQQRGRTGFFEGPPDLAVEVVSPHDTAEEVEAKVLDYLEAGTRMVWIVRPRTRTVTVYRSLREVQVLRPGDTLEGGDVLPGFAVPVEALFGG
>NC_009523.1|WP_011956162.1|1717877_1720538_+|DUF2029-domain-containing-protein
MRFARTLALGALTALVGVHLVFFAIRAWHVLTFPYPLDYGEGPLLAQVNHLRSGASLPHLYGDPAQPPYLVVNYPPVYLIVTSLVAPLLDWTLPGSATTPLAGRLVTLCATLICVLLIWRLTLPPDPSIRRATAGQSGTALIVALAFLALPIVREWSALMRVDLLGVCLGLWGLLLTRRLSRLAAILIALSLLVKPSLIAAPAAALVWLWFRDRRRALEVAAGMVALGGAAAGALQVASGGWFWLHVVSANANPWSPALAEGFWRDQAAILGSLWLGAVFAAALILMRGARRKTRQSNVPPPPAETVYALLPIVYTCFGAYVAFGVGKVGAYANYFLEFYAGAIWLIATVIAQLLDTDRPRSDAQHYSAQPPEFHEQPVEAQSPALASRISMMISWFKTLNARPPVATSLPVRAFQPGLEIWFSLLILLLLVAALIRYYPLWSENHVKPYGLIEGDNPPRFAFGRYGIWRDLQREEEILTTLRRVNTVLVADVRTVGQPIVTDIPGIAAQAGVLSRLQAFEHRQLYDAGLLDQRPLLRDMANGRVPLVVLDYLGNWLTPDMITLITHRYAQEGSRGTFDLYRPVDPGQRSDVRIEIGADIRITAVFLTRPGGTRYDPGERIALTLELNRNRDVAGVCDVVVCQVQVRLVTRDGAPVAAWERPLVYGALRPSDWNDAAIQHMHTLDLPLDLPPGMYHLAVALRANDDMLTPSHPVALIEVGESGGRVLGERGYFVPAPLFAVWMDAGGYEGPGDPLMPAVPFADGVLQCFTRVCFRVTGNEITRLPLGELALIGESGLRPAPPEPGPVRSFPETGYALRGAFLEAWEIYGGMAALGPPISDEMLRGATRVQYTRYARLERLDGETTVLLANLGEEHLRLPGIPYRWR
>NC_009523.1|WP_011956161.1|1716876_1717734_-|aldo/keto-reductase
MIATAPFGRTGHHSTRAIFGAAALSRVTQEEADRTLDLLLRYGVNHIDTAASYGDSELRIGPWMAEHRSRFFLATKTGERTYQRARDEIHRSLERLRVDVIDLIQLHNLVDSQEWEQALGPGGALEAAIEARDQGLVRFIGITGHGVTVAAQHRRALDRFPFDSVLLPYSYILMKNPQYAADFEALAAVCRERGVAMQTIKAITQAPWGERERRHATWYAPLEDQADIDLAVHWVLGRADVFLNTVGDIELLPRVLDAASRFQARPGDDEMEHLLEERDMTPLFV
>NC_009523.1|WP_157040997.1|1715861_1716104_-|hypothetical-protein
MLFILIEAAFWSVAVGLVTLGALGWTHTVGYYVLLALGVTLIGPSVRVRHLCNVSSFEELAGEFGVIVLLTLGFLFVVSL
>NC_009523.1|WP_011956159.1|1715283_1715835_-|DUF3592-domain-containing-protein
MLAGGQLLVIMSITFGLLLLGIGVFALFLGLRLLWGMPAALSQTSGVRLAARCWPAAPGTIIGAEVRVAPGSDEEPFYDAVVRYAYTVQGQEYEGAQDDLTYVSNVQDAAQAIVARYQVGASVLVYYDPQAPQRALIDRSIRPHHLVGLSLADLLFLLLVAGGLLAILTGLAILAAPGPPPPD
>NC_009523.1|WP_011956158.1|1714645_1715197_-|hypothetical-protein
MNTQPNASRQHRAWRDEGGAETTPIIVLSALCILTLLAAVGLGLAVRDSGAGSAIARRLTRPVSGLTPGLSGTGPQQPGISGVHISAPNIQGSSIQAPSLSAPNIQGASIQAPSLSVPDIQAPAIPAPGIHGPTITTPIPGAPGAAMMAVPAVMLLIGVGIVLALAACSLVYFRARARARRAE
>NC_009523.1|WP_011956157.1|1713918_1714299_-|hypothetical-protein
MMRRASSHSMTPPAPSFRKRLWIGVGLLFTLALVNELAAGQKVWLWGAGLLVGALIGLFIAVRNSNPSNHPAIETLGWIVAAALGIAIVVALPKHVLYTLLKIAIIALLWSGRRRDRCDHHHSQPN
>NC_009523.1|WP_011956156.1|1713275_1713878_-|RDD-family-protein
MSSISIAPTYSGVNLAERPSRRRRAGALLIDACIHNAAFLVSFVVVYLPLAIVYYLITGRDPEFISESVAGNLLDYAVSLFSAFTYFIAFETIYGATPGKWLLGMHVFKSDGRRCDARAAAIRALCLFFIDGLLYGLVAYLSMQPPLYQRVGDRIAKTVVVKRRESPSPPPPFWRFLVAAAIYLIITKVAVFIVVLAWTI
>NC_009523.1|WP_011956155.1|1711607_1712918_-|hypothetical-protein
MVLRDERGAEAVQWVALSGVVVIMIVAIWAAFYGGSGRMLRQAIQAQTTRYAMSFEGGVRTSGPRGRVPRFRGNVFIEPVNVAPVRLNPALLEPLTIDPILITAPEVTVIPVEPRDVAAIPIEPRDVAAIPVEPRDVAAIPVEPRDVAAIPVEPRDVAAIPVEPRDVAAIPVEPRDVAAIPVAGRDVNGIPVAGRDVAGVPVAGRDVNGIPVEPRDVNGIPVAGRDVAGVPVAGRDVNGIPVEPRDVNGIPVAGRDVAGVPVAGRDVAGVPVAGRDVAGVPVAGRDVAGVPVAGRDVAGVPVAGRDVAGVPVAPSAMAATPIELPMVLTVHVHPTPGVHVRIDPETGNIIMRHPRQSYVIIIDPDRGKAVMIDPVTHVVTPVDLETMQRYGWIDVRLERSPGQVAPIYLNVLAIPVLVIPALTIPALSIPFLNGAQ
>NC_009523.1|WP_041333252.1|1711298_1711574_-|hypothetical-protein
MEHSEGRVRGGWAGGTPLYPNLLWRRKAVQTVIGLIVLLVMVWWTILTASAGVVRASERISPVLAIPRLIQPASALPAPFMVPLPNTSIAC
>NC_009523.1|WP_011956164.1|1721900_1722455_-|Uma2-family-endonuclease
MTSATTTITAEELERMALGEQRVELVRGEVITMAPAGAEHGEIAGFTFGVLFQFVRAHSLGSLYAAETGFVLARNPDTVRAPDVAFVTAERAAQQRGRTGFFEGPPDLAVEVVSPHDTAEEVEAKVLDYLEAGTRMVWIVRPRTRTVTVYRSLREVQVLRPGDTLEGGDVLPGFAVPVGAIFEG
>NC_009523.1|WP_011956165.1|1722737_1723568_-|glycosyltransferase-family-2-protein
MTNLDPSPYLSVVIPAYNEERRLPTTLRRILDYLSQQPYTSEVIVADDGSSDGTAAYVDRLLDAHRNLFLLRLDHRGKGYAVRAGTLMARGEYILLCDADLATPIEEWDRLRRYLESGYDLAIGSREGIGARRIGEPWYRHVMGRVFNTIVRLVAVGGIQDTQCGFKALRRAVAFDLFRRVRIYDDNAPCVDGAAVTAYDVELLYLAVRRGYRIAEVPVVWQYGEETKVNPLRDSWRNLRDVLKVRWYALRGMYTGLDAPLATVVEEPARKTVDTR
>NC_009523.1|WP_011956166.1|1723577_1724516_-|glycosyltransferase-family-2-protein
MIDIIIPNYNGAALLPTCLDSLRAQTRRDFCVVVVDDGSTDDSVALVRRRYPEVQVIALPRNRGLAAAVNAGIEATGGEYVVLLNNDTEAHPRWLEHLIGALDRYPAYAFAASKLMLFDRRDHFHSAGDYYRLDGVPGSRGVWQRDIGQFDVMEEVFGPCAGAAAYRRAALEELAEQGRVFDEDLVMYCEDVDLNVRARLRGMRTVYVPRAVVYHRLSATGGGALASYYCGRNFMLVWAKNMPTTQARRYWPLLLWSQIGFAFHSIWHIREPAARARLRGQIDGLRALPQFLRKRRRSRERYADRLVVETRY
>NC_009523.1|WP_011956167.1|1724940_1725786_-|dTDP-4-dehydrorhamnose-reductase
MRIAVTGASGQLGKALQRALCGVHEVVPLSHADLDLEHPDCVQRLVATDAQCVIHPAAYTNVDGCAHDPDRAYRVNALGTRYVALACQLLDAPLVYISTNEVFNGTATAPYLEYDRPAPINPYGYSKWAGEQAVRELLHRFYIVRVAWLFGGERNFVRTVLRLARERNQIAMVADEIGSPTCAPDAAEAVARLIETSCYGTYHLVNEGSCSRYEFAAATLRLAGRDDVALQPITLAEYPRASKVPPYTPLRNFAAADLGIRLRPWEEALAEYVEGVLKVEG
>NC_009523.1|WP_157040998.1|1726086_1726425_+|hypothetical-protein
MPLRWIAVALLTLLATALIAGVLGVGAMQRRVITAPHINLTMGSFTLRAFATRTPNCRIPSTQPGNSFCSTNSIYSTDEYYVVWLLKQTRRGSVTFEEAQRLALVRLRDDMR
>NC_009523.1|WP_011956169.1|1726430_1728089_+|peptidase-M9
MVRTTPILLLFVFALTTVSPQPPRLSPTPACPRVHHQGPYSLIAMLYAAGYECTEEIARALTPVADADILDHLIRLTAPEFHSLTRRNALRVIGRWTEDPQARTVVLRNAPAIHHRLLTLVQHDPSDDVRADAIWILDTFFFPAYHAQSAFVAIALTPGSGANLRTRATYAVARLIATRAGPIADDDLAFLLAGLRSDEAGVRARAADAIWRLRDDQIDAAARARITVALEEAWDAATRLASVETIAPAPPAIHAGRFISGVPETSPGPFAARAALARALDRFGGERFAVLRASFESTHLPVCLERRLLRICAGSPAPDLDAIAARLEYLRTAFFELTGVTDPVPDDPTGVLTIKLFANRSVFREYMLAFVGFGADVDGVYVENDGVLYTYRRDATESVNTTDETIAHEFGHYLTGRYLFPGAWHDPGYHAEPKGWIDEGIAEYLAGLDSAGSRAALDRLCNRPVPPDLDRLLTQREGYDQYGVFAYDDAWAFVTFLVQERPSDLRAIAAAFRANTYRQSDLATIIGVPSIAALQEEWHTSLARWCSQRVAR
>NC_009523.1|WP_011956171.1|1729989_1731237_+|amino-acid-ABC-transporter-substrate-binding-protein
MHTRFSPAARVPPIALIVLAFVLAGCGNLGGLLGGQPTPEPIILIATATPAPVSQATATLTVAPSPTSAPSDDATATPAPPTAEPPTPPPAPQKILARVKERGYLICGTNADLPGFGFYDSVRQTWSGFDVDFCRAVAAAIFGDATKVEFVALGTGPGPNNRFDAVREGRVDVLFRNTTWTLGRNISGLAFGPTTFHDGQTFMVRAKDRITKLEDLEGKVICVAKGTTSEQNLNDDFAARGIRFTARVLDGEDELYPAYDEGECDAVTSDSSQLAAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNVDRLRTSTTDPRIKRLLGLEGNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVINLDRGPNKVWNLGAGGVLASPPFR
>NC_009523.1|WP_157041268.1|1732394_1733987_-|hypothetical-protein
MNTSNLIQDGGFEQEGEGWEACGNVALVDAQADGAEFVYSGRYAAVMGVEADGSNCPQLPDFTTPKQILSQQVSIPGNAAAVTVSFWFRAAAGTTVDVFLANSFYQFDPGLIGVKLGTFPTDQPPGWQLYRTVLQGERLERVRGRTLRFAIVIQGGTSVGPDTVLLIDDVQVIAADGRTAASPLPPALRGDGSRPLAVIRAEGQNRWLYRMDTDGTNAQLIYRGLLGDVRYPAWSHDGQRIAVVDNNTWPWPTPDPDPQNNLVASAITVINADGSGARQVYQTQSRKGSRCPFIPGPGNPTETPSLILRISSVQWLPDNNRIALTQVGFGAFCDGRLAQGGTADILSLTPPSLVTSPLAQRATAPSINRNGKMLFHGFDLSRPRNRADGVWELDLGAQPPSETHLIAHGADQSPAWAPDGRRFAVVRRTTSPSADVSESTYAIMLYDRQNLNNPRMLLFADHGRSVSSLSWSPDGAYLVYTLYQSDGGGDIWWLDVSSGATGPITKDGQALEAAWRPVSVSRVFLPLVVR
>NC_009523.1|WP_157040999.1|1734378_1734696_+|hypothetical-protein
MEQLDEYQFGVADMSADIVHLQFSYPPGDLAALAGPWRALPVIIIPACHGAPENAAAHLSSPARVHIAPCHADHRQQPGIQRLIAVSAPVRRQMWSNPGTDRRNR
>NC_009523.1|WP_011956173.1|1734815_1735061_+|hypothetical-protein
MSITSVKEQVVQALNTLSEAELQQVAEYVAFLRFRARVAPLPVIDATQIATLYAGFADEDRALAEEGLEDYRVQLHDEDAQ

Crispr_ID: NC_009523_32

• CRISPR_ID: NC_009523_32
• CRISPR_location: 1735901-1736001
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_32

Consensus_repeat	Method
TTGGAGTTCGCGTTCCGTGCAGGGGGGCTT	CRISPRCasFinder

spacers of NC_009523_32

>32.1|1735931|41|NC_009523|CRISPRCasFinder
TGTCCTGGATAGCCGATAGGCGAGAGGCGAGAGGGTCGCCG

CRISPR arrays and Neighbor proteins around NC_009523_32

CRISPR arrays

The CRISPR arrays of NC_009523_32

>merge|NC_009523|32|1735901-1736001|CRISPRCasFinder
TTGGAGTTCGCGTTCCGTGCAGGGGGGCTTTGTCCTGGATAGCCGATAGGCGAGAGGCGAGAGGGTCGCCGTTGGAGTTCGCGTTCCGCGCAGGGGGGCTT

>NC_009523|32|29|1735901-1736001|CRISPRCasFinder
TTGGAGTTCGCGTTCCGTGCAGGGGGGCTT	TGTCCTGGATAGCCGATAGGCGAGAGGCGAGAGGGTCGCCG
TTGGAGTTCGCGTTCCGCGCAGGGGGGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041333262.1|1738126_1738393_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956166.1|1723577_1724516_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133029
NC_009523.1|WP_011956180.1|1743783_1744689_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NC_009523.1|WP_011956181.1|1744875_1745661_-|DUF4058-family-protein	unknown	unknown	gnl|CDD|379094
NC_009523.1|WP_011956165.1|1722737_1723568_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133031
NC_009523.1|WP_011956173.1|1734815_1735061_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041001.1|1745648_1745798_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041000.1|1738399_1738558_-|hypothetical-protein	unknown	unknown	gnl|CDD|237799
NC_009523.1|WP_011956169.1|1726430_1728089_+|peptidase-M9	unknown	unknown	gnl|CDD|366791
NC_009523.1|WP_157040998.1|1726086_1726425_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956171.1|1729989_1731237_+|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270410
NC_009523.1|WP_157040999.1|1734378_1734696_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333266.1|1738715_1740137_-|pyruvate-kinase	unknown	unknown	gnl|CDD|223545
NC_009523.1|WP_011956183.1|1746724_1749898_-|alpha-mannosidase	unknown	unknown	gnl|CDD|223460
NC_009523.1|WP_011956167.1|1724940_1725786_-|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl|CDD|224016
NC_009523.1|WP_011956182.1|1745801_1746677_-|arginase	unknown	unknown	gnl|CDD|212515
NC_009523.1|WP_011956178.1|1740151_1740814_-|ComEA-family-DNA-binding-protein	unknown	unknown	gnl|CDD|224472
NC_009523.1|WP_157041268.1|1732394_1733987_-|hypothetical-protein	unknown	unknown	gnl|CDD|274305
NC_009523.1|WP_011956174.1|1735057_1735324_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NC_009523.1|WP_011956179.1|1741027_1743397_-|type-I-DNA-topoisomerase	unknown	unknown	gnl|CDD|235840

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956166.1|1723577_1724516_-|glycosyltransferase-family-2-protein	gnl|CDD|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	6.42817e-55
NC_009523.1|WP_011956180.1|1743783_1744689_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.45597e-08
NC_009523.1|WP_011956181.1|1744875_1745661_-|DUF4058-family-protein	gnl|CDD|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	4.42276e-106
NC_009523.1|WP_011956165.1|1722737_1723568_-|glycosyltransferase-family-2-protein	gnl|CDD|133031	cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.	1.06181e-80
NC_009523.1|WP_041333266.1|1738715_1740137_-|pyruvate-kinase	gnl|CDD|223545	COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism].	0
NC_009523.1|WP_157041000.1|1738399_1738558_-|hypothetical-protein	gnl|CDD|237799	PRK14715, PRK14715, DNA-directed DNA polymerase II large subunit.	0.00572914
NC_009523.1|WP_011956169.1|1726430_1728089_+|peptidase-M9	gnl|CDD|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	1.3029e-12
NC_009523.1|WP_011956171.1|1729989_1731237_+|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|270410	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold. BztA is the periplamic-binding protein component of ABC transporter specific for carboxylic amino acids, glutamine and asparagine. The BZtA domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.09937e-106
NC_009523.1|WP_011956178.1|1740151_1740814_-|ComEA-family-DNA-binding-protein	gnl|CDD|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	2.30404e-28
NC_009523.1|WP_011956183.1|1746724_1749898_-|alpha-mannosidase	gnl|CDD|223460	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism].	6.25166e-178
NC_009523.1|WP_011956167.1|1724940_1725786_-|dTDP-4-dehydrorhamnose-reductase	gnl|CDD|224016	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].	2.59865e-100
NC_009523.1|WP_011956182.1|1745801_1746677_-|arginase	gnl|CDD|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	8.90035e-31
NC_009523.1|WP_157041268.1|1732394_1733987_-|hypothetical-protein	gnl|CDD|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	8.9709e-08
NC_009523.1|WP_011956174.1|1735057_1735324_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	1.66924e-23
NC_009523.1|WP_011956179.1|1741027_1743397_-|type-I-DNA-topoisomerase	gnl|CDD|235840	PRK06599, PRK06599, DNA topoisomerase I; Validated.	0

Protein sequences

>NC_009523.1|WP_011956174.1|1735057_1735324_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MMIKRGEVWLADLNPIRGSEQASIRPVLIFQNDAINTFTTTVVTIPFTTNLRRAALPSCVRVAAGDGGLSDDSVALCHQLRVLDATRL
>NC_009523.1|WP_011956173.1|1734815_1735061_+|hypothetical-protein
MSITSVKEQVVQALNTLSEAELQQVAEYVAFLRFRARVAPLPVIDATQIATLYAGFADEDRALAEEGLEDYRVQLHDEDAQ
>NC_009523.1|WP_157040999.1|1734378_1734696_+|hypothetical-protein
MEQLDEYQFGVADMSADIVHLQFSYPPGDLAALAGPWRALPVIIIPACHGAPENAAAHLSSPARVHIAPCHADHRQQPGIQRLIAVSAPVRRQMWSNPGTDRRNR
>NC_009523.1|WP_157041268.1|1732394_1733987_-|hypothetical-protein
MNTSNLIQDGGFEQEGEGWEACGNVALVDAQADGAEFVYSGRYAAVMGVEADGSNCPQLPDFTTPKQILSQQVSIPGNAAAVTVSFWFRAAAGTTVDVFLANSFYQFDPGLIGVKLGTFPTDQPPGWQLYRTVLQGERLERVRGRTLRFAIVIQGGTSVGPDTVLLIDDVQVIAADGRTAASPLPPALRGDGSRPLAVIRAEGQNRWLYRMDTDGTNAQLIYRGLLGDVRYPAWSHDGQRIAVVDNNTWPWPTPDPDPQNNLVASAITVINADGSGARQVYQTQSRKGSRCPFIPGPGNPTETPSLILRISSVQWLPDNNRIALTQVGFGAFCDGRLAQGGTADILSLTPPSLVTSPLAQRATAPSINRNGKMLFHGFDLSRPRNRADGVWELDLGAQPPSETHLIAHGADQSPAWAPDGRRFAVVRRTTSPSADVSESTYAIMLYDRQNLNNPRMLLFADHGRSVSSLSWSPDGAYLVYTLYQSDGGGDIWWLDVSSGATGPITKDGQALEAAWRPVSVSRVFLPLVVR
>NC_009523.1|WP_011956171.1|1729989_1731237_+|amino-acid-ABC-transporter-substrate-binding-protein
MHTRFSPAARVPPIALIVLAFVLAGCGNLGGLLGGQPTPEPIILIATATPAPVSQATATLTVAPSPTSAPSDDATATPAPPTAEPPTPPPAPQKILARVKERGYLICGTNADLPGFGFYDSVRQTWSGFDVDFCRAVAAAIFGDATKVEFVALGTGPGPNNRFDAVREGRVDVLFRNTTWTLGRNISGLAFGPTTFHDGQTFMVRAKDRITKLEDLEGKVICVAKGTTSEQNLNDDFAARGIRFTARVLDGEDELYPAYDEGECDAVTSDSSQLAAKRQQLKNPADHIILGDRISREPLGPVIARDDNQWLDVISWTVFATIYAEELRVDQRNVDRLRTSTTDPRIKRLLGLEGNFGEGLGLPNDFAYQIIKQVGNYGDIYNRNLGPNTVINLDRGPNKVWNLGAGGVLASPPFR
>NC_009523.1|WP_011956169.1|1726430_1728089_+|peptidase-M9
MVRTTPILLLFVFALTTVSPQPPRLSPTPACPRVHHQGPYSLIAMLYAAGYECTEEIARALTPVADADILDHLIRLTAPEFHSLTRRNALRVIGRWTEDPQARTVVLRNAPAIHHRLLTLVQHDPSDDVRADAIWILDTFFFPAYHAQSAFVAIALTPGSGANLRTRATYAVARLIATRAGPIADDDLAFLLAGLRSDEAGVRARAADAIWRLRDDQIDAAARARITVALEEAWDAATRLASVETIAPAPPAIHAGRFISGVPETSPGPFAARAALARALDRFGGERFAVLRASFESTHLPVCLERRLLRICAGSPAPDLDAIAARLEYLRTAFFELTGVTDPVPDDPTGVLTIKLFANRSVFREYMLAFVGFGADVDGVYVENDGVLYTYRRDATESVNTTDETIAHEFGHYLTGRYLFPGAWHDPGYHAEPKGWIDEGIAEYLAGLDSAGSRAALDRLCNRPVPPDLDRLLTQREGYDQYGVFAYDDAWAFVTFLVQERPSDLRAIAAAFRANTYRQSDLATIIGVPSIAALQEEWHTSLARWCSQRVAR
>NC_009523.1|WP_157040998.1|1726086_1726425_+|hypothetical-protein
MPLRWIAVALLTLLATALIAGVLGVGAMQRRVITAPHINLTMGSFTLRAFATRTPNCRIPSTQPGNSFCSTNSIYSTDEYYVVWLLKQTRRGSVTFEEAQRLALVRLRDDMR
>NC_009523.1|WP_011956167.1|1724940_1725786_-|dTDP-4-dehydrorhamnose-reductase
MRIAVTGASGQLGKALQRALCGVHEVVPLSHADLDLEHPDCVQRLVATDAQCVIHPAAYTNVDGCAHDPDRAYRVNALGTRYVALACQLLDAPLVYISTNEVFNGTATAPYLEYDRPAPINPYGYSKWAGEQAVRELLHRFYIVRVAWLFGGERNFVRTVLRLARERNQIAMVADEIGSPTCAPDAAEAVARLIETSCYGTYHLVNEGSCSRYEFAAATLRLAGRDDVALQPITLAEYPRASKVPPYTPLRNFAAADLGIRLRPWEEALAEYVEGVLKVEG
>NC_009523.1|WP_011956166.1|1723577_1724516_-|glycosyltransferase-family-2-protein
MIDIIIPNYNGAALLPTCLDSLRAQTRRDFCVVVVDDGSTDDSVALVRRRYPEVQVIALPRNRGLAAAVNAGIEATGGEYVVLLNNDTEAHPRWLEHLIGALDRYPAYAFAASKLMLFDRRDHFHSAGDYYRLDGVPGSRGVWQRDIGQFDVMEEVFGPCAGAAAYRRAALEELAEQGRVFDEDLVMYCEDVDLNVRARLRGMRTVYVPRAVVYHRLSATGGGALASYYCGRNFMLVWAKNMPTTQARRYWPLLLWSQIGFAFHSIWHIREPAARARLRGQIDGLRALPQFLRKRRRSRERYADRLVVETRY
>NC_009523.1|WP_011956165.1|1722737_1723568_-|glycosyltransferase-family-2-protein
MTNLDPSPYLSVVIPAYNEERRLPTTLRRILDYLSQQPYTSEVIVADDGSSDGTAAYVDRLLDAHRNLFLLRLDHRGKGYAVRAGTLMARGEYILLCDADLATPIEEWDRLRRYLESGYDLAIGSREGIGARRIGEPWYRHVMGRVFNTIVRLVAVGGIQDTQCGFKALRRAVAFDLFRRVRIYDDNAPCVDGAAVTAYDVELLYLAVRRGYRIAEVPVVWQYGEETKVNPLRDSWRNLRDVLKVRWYALRGMYTGLDAPLATVVEEPARKTVDTR
>NC_009523.1|WP_041333262.1|1738126_1738393_-|hypothetical-protein
MHQVRALRWSACWMVIAALLLSIAVGSPVALAVEPTPAPTEPRQESLAGPMIGLSLAIASSALAAGIAFGVRRRIDEIGAEGDSRGRE
>NC_009523.1|WP_157041000.1|1738399_1738558_-|hypothetical-protein
MVETELSGIVIIVLALGIILCGPALFIQGWRWLRRIVHAGMRSARSKPLQEE
>NC_009523.1|WP_041333266.1|1738715_1740137_-|pyruvate-kinase
MRRTKIVATIGPVSSTPEVIERLLNAGMDVARLNFSHGTQDEHARRIEMLREVAVRKGRPLALLQDLQGPKIRTGSLVDRTPVMLQPGARFTITTRNVAGTASLVSTTYAALPRDVRPGDRILISDGLIEARVVRVSGDDVETEIVVGGELREHQGINLPGVAVSAPALTDKDRSDLLFGLAQGVDYVALSFVRRASDLVEIKAQIAAAGASTPVIAKIEKPEALHEFEAILEAADGIMVARGDLGVEMPPEQVPIVQKQVIEATNMAGKPVITATQMLDSMIRNPRPTRAEASDVANAIIDGTDAVMLSGETATGAYPVEAVQMMGRIAEVTEASGRRGDHSHEIIWRFHEQPTVAAAISSAVHAIVQVLPVTAIVAFTMSGSTARLVARQRPKTPIFALTPSEAVYRRLNLVWGVTPLLCPYVDRLDDLEDAVRNVLIGQGYARPGDQIVMTGGHPIATRGATNFVKVMRL
>NC_009523.1|WP_011956178.1|1740151_1740814_-|ComEA-family-DNA-binding-protein
MELLSELAQRKALIAAALLFALGAGVLGQTILEYMAPPTAPPAATTEFVVDEEFTEETGGRAAAERPATPTAIPFIVAYVSGAVRAPDVYRLPGGARIKDLVLAAGGFADDADIERINLAAPITDGQHVRVPWIGDGTSAVEITPAESPKGGNSGGLLDLNRATVAELDALPGIGSVLANRIVEWREREGPFRSVDDLGKVEGIGPALLAKLAPLVTVAP
>NC_009523.1|WP_011956179.1|1741027_1743397_-|type-I-DNA-topoisomerase
MGEKLVIVESPAKARTIQKYLGQGYRVEASMGHVRDLPKSDLGVDLDANFTPVYEVSPGKEKIIAALRKSIRQADAVYLATDPDREGEAIAWHITEAAKIPRGKPVYRVVFTEITPGAVRSAMASPRDIDRRLVDAQQARRVLDRLVGYKLSPLLWEKVRRGLSAGRVQSVAVRLIVEREREIEAFVPQEYWTIEADLLKQEARDPFRAVLIERAGRKLEKFDIGSGEQAQAIIVDLEGAAYIVRKVTRRDKRRSPPPPFTTSTLQQEAGRKLGFSAKRTMAVAQQLYEGVDIGGDEGLVGLITYMRTDSVNVSREAQEEARIVIRDRYGEAYLPPKPPVYKTKTKGAQEAHEAIRPTLSRRTPEQVQPYLTSDQYRLYELIWKRFVASQMEAAVFDSTTVDIGAGRGIERSAGNDPYTFRTTGSVLKFPGFLAVYNVSLDEGEEDEDSERRLPLLAEGDVLALVQLLPVQHFTEPPPRFTEASLVKELERLGIGRPSTYAPTISTIIEREYVELADKKLVPTTLGRVVTDLLVQHFPSIVDYGFTSEMEQQLDDIAEGEKEWTPVLRSFYEPFEQKLADAQRSMRNVKREEILTDLTCPKCSQGQLAIRFGKNGEFLACNRYPECDFTSDFHRDGEGRIVIDAPAAPEVSDVICELCGRPMVLKKSRFGPFLGCSGYPECKNTRRLDKQGKPVPPPKATGVTCPKCRQGELLERRGKFGRPFFGCSRYPKCDYLVNSLEEVANYTPENNAPMEAKAEEQPATKRTKTSTGKKRAKTTAPGSGTPNVED
>NC_009523.1|WP_011956180.1|1743783_1744689_-|GNAT-family-N-acetyltransferase
MAVMSRLYAGEDDYARMRQLVAEIEALEGPRVYCHVGNLDWWRCTDEDTHALPTRIRLWFDHQGALVGFTWPSEHQVDLLVHPAHRSIEPAMLDWVEHLSRLDVDDPHPHVSVWSYAHDTYRNDLLAQRGYRRTEHFLSLSVRDLGQRVSEPDIPSGYVIRTMNGEDDVHARVEAHCDAFAPSRMTIARYRAVVHAPAYRPDLDLIAVAADGTVAAFCTLWFDPINRVGEIEPLGCRAAHRRRGLARALVLEGLRRLQGYDARYVTVFYGSEPEDQPARHFYASLGFVEQGRIYAWIKEGR
>NC_009523.1|WP_011956181.1|1744875_1745661_-|DUF4058-family-protein
MQSPFPGMDPYLESAAIWPDVHAGLIAAMRRQLQPRLSPRYVAVIVPYTAFETIDVNLSRFLVPDIAIIEHEQQSSVTATTVAPAPVVGALDVEIETRYSRLEVRTVRDETVVTAIELLSPANKRTGIDAADAYERKRREIIRSPVHLIEIDLLRGGQRPSLATPWPSTPYVIMLSRADQRPRVEIWPVQLQDPLPVVPVPLRDPDPDVPLDLGAALNEAYAEGRYDLRIDYREPPPPPPLSPVDEAWLTRRLVAVGLRQA
>NC_009523.1|WP_157041001.1|1745648_1745798_+|hypothetical-protein
MVIAYAPPAGIVARMQAHDLSHLRQIIGWGYAYPAAQAVSYRVACAGEW
>NC_009523.1|WP_011956182.1|1745801_1746677_-|arginase
MKTHALTALQVIGVRYRGSKPAEGDERALDAYAASGVYSTAGVPVTISEPQMPEAQRSDDEPSNLGWICRAIADDVAAARTIGRAPLIVGGDCTHAVGVIAGLQRSCGPHTRIGLVWFDAHGDYNTPCTTLSGMLGGMPVAVCAGLALPQWRDLAGMTAPLPTDRILLVDGRNLDPPEEQLIRATETAIVDLNDFAGPLAALATTCDLLYLHVDSDILDAALVPNHATREPHGPGLTDVSVAIEAVMATGKVGAFAVVSVYGAGPGSAISVASGTALIRAGLEAWARYGMI
>NC_009523.1|WP_011956183.1|1746724_1749898_-|alpha-mannosidase
MLFFTVEKLKARLEEMRAAIIRDTRPITNVWTCPAPGTPPDNAMSPPPPPDDPSWRPLKVGERWGGDPQSPDKPDEPLPWGMPVDGGHTHWLRTTLRVPEEWRGRQVQVRLRWSEEGHAGIEGILYLDGRALAGIDEPHPAALIPESAHEGEHEALIRCYTPYPRPFGGLELQLRDEIIGRLTAVMYAVLDAISTYRESDPEKHALLDRINRAYNLLDLREGWQSERFAISAGAALTFLRETLTANLEPGQRPTILATGHAHMDVAWLWPLWRTRQKIAHTVATALHLMERYPEYHFSMSQPQTYSFLKQDDPELYERLCQRVAEGRFEPVGAMWLEPDCNVTGGESLVRQVIHGMRFFEGEFGLIEHVIWLPDVFGYSAALPQIMRLAGISCFMTTKISWNQFNRMPCDTFRWRGIDGSEVLAHFVTATSAPLKPNPTEAQFYTYNGSMLPSEVFGTWNHYRQKDINDEVLYIYGHGDGGGGPTEEMLELARVMSDLPGFPVVRPGRVEQYFQRLRQRVWNNPRLPVWVGELYLEYHRGTYTSQARTKQNNRQAELLLREAEWLNAWAVTQGAINRQADLDAAWRTVLLNQFHDILPGSSVPLVYVESERQFAEVRETVETVRHAAITDLTESDGNGATPRLAVFNSLAWDRTECVAIPLDDRPRPAVAGVTQTVEHLDGTRALLVEASVPAFGYTAIDKVSRPTPPARFTVRREYLASDEFRIEFDTHGEIGSLYDARYEREIIAEGATGNQLVLYEDRPMFWDAWDIDPFYLEKPYPIHDISEWRVVEEGPLRATVEIVRRFGKSTIRQRISLWRNSRRIDFDTEVDWQERQNLLRVLFPLRLNATRATCEIQFGAVERPTHRNTSWDWARFEVCAHRWVDLSEGGYGVALMNNGKYGHSLLHNTLGISLLKSAVIPDPQADRGVHRFMYSLLPHAGDWREAQVTRRAYELNAPLRPVTVMGEVPAEGRSFLRVESDHVVVETIKTADDGDGLIVRMYEAHNQRGQVRLDFGRPVESAVEVDLLERETGPVTVDGQTVQCNVRPFEIKTIRVRL

Crispr_ID: NC_009523_33

• CRISPR_ID: NC_009523_33
• CRISPR_location: 1787024-1787114
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: WYL

Consensus repeat of NC_009523_33

Consensus_repeat	Method
ATGGAGATTGAGAATTTAATCCG	CRISPRCasFinder

spacers of NC_009523_33

>33.1|1787047|45|NC_009523|CRISPRCasFinder
GTATGCGCCTTGTGCCGTGGGGCGTGACGCCGCTTGTGCGGGCTA

CRISPR arrays and Neighbor proteins around NC_009523_33

CRISPR arrays

The CRISPR arrays of NC_009523_33

>merge|NC_009523|33|1787024-1787114|CRISPRCasFinder
ATGGAGATTGAGAATTTAATCCGGTATGCGCCTTGTGCCGTGGGGCGTGACGCCGCTTGTGCGGGCTAATGGAGATTGAGAATTTATTCCG

>NC_009523|33|30|1787024-1787114|CRISPRCasFinder
ATGGAGATTGAGAATTTAATCCG	GTATGCGCCTTGTGCCGTGGGGCGTGACGCCGCTTGTGCGGGCTA
ATGGAGATTGAGAATTTATTCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956224.1|1797653_1800170_-|SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|380297
NC_009523.1|WP_011956222.1|1794656_1795736_-|DUF3644-domain-containing-protein	unknown	unknown	gnl|CDD|378842
NC_009523.1|WP_011956215.1|1785846_1786872_+|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009523.1|WP_011956208.1|1776995_1777241_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956206.1|1774121_1775480_-|TrpB-like-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|237087
NC_009523.1|WP_011956217.1|1790727_1791576_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_085979421.1|1796589_1797647_+|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011956220.1|1792693_1793881_-|phosphoglycerate-kinase	unknown	unknown	gnl|CDD|234613
NC_009523.1|WP_011956221.1|1794012_1794660_-|hypothetical-protein	unknown	unknown	gnl|CDD|223829
NC_009523.1|WP_011956223.1|1795732_1796476_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956210.1|1777851_1779129_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238742
NC_009523.1|WP_011956225.1|1800174_1803597_-|helicase	unknown	unknown	gnl|CDD|197275
NC_009523.1|WP_011956207.1|1776123_1776882_+|hypothetical-protein	unknown	unknown	gnl|CDD|224429
NC_009523.1|WP_011956212.1|1780282_1782244_-|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956211.1|1779236_1780205_-|serine/threonine-protein-phosphatase	unknown	unknown	gnl|CDD|223704
NC_009523.1|WP_011956214.1|1783338_1784499_-|radical-SAM-protein	unknown	unknown	gnl|CDD|226727
NC_009523.1|WP_011956218.1|1791593_1792166_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|182012
NC_009523.1|WP_011956219.1|1792377_1792632_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956209.1|1777253_1777775_-|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|238017
NC_009523.1|WP_011956213.1|1782684_1783308_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|377965

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011956215.1|1785846_1786872_+|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	4.4e-23	76.9	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956224.1|1797653_1800170_-|SAM-dependent-methyltransferase	gnl|CDD|380297	NF033455, BREX_6_MTaseX, BREX-6 system adenine-specific DNA-methyltransferase PglX.	2.87044e-11
NC_009523.1|WP_011956222.1|1794656_1795736_-|DUF3644-domain-containing-protein	gnl|CDD|378842	pfam12358, DUF3644, Protein of unknown function (DUF3644). This domain family is found in bacteria, and is typically between 65 and 80 amino acids in length.	5.01756e-22
NC_009523.1|WP_011956215.1|1785846_1786872_+|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	3.90543e-21
NC_009523.1|WP_011956213.1|1782684_1783308_+|SH3-domain-containing-protein	gnl|CDD|377965	pfam08239, SH3_3, Bacterial SH3 domain.	1.12588e-07
NC_009523.1|WP_011956206.1|1774121_1775480_-|TrpB-like-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|237087	PRK12391, PRK12391, TrpB-like pyridoxal phosphate-dependent enzyme.	0
NC_009523.1|WP_011956220.1|1792693_1793881_-|phosphoglycerate-kinase	gnl|CDD|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NC_009523.1|WP_085979421.1|1796589_1797647_+|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011956221.1|1794012_1794660_-|hypothetical-protein	gnl|CDD|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	2.56376e-05
NC_009523.1|WP_011956210.1|1777851_1779129_-|VWA-domain-containing-protein	gnl|CDD|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	8.67569e-61
NC_009523.1|WP_011956207.1|1776123_1776882_+|hypothetical-protein	gnl|CDD|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	0.000304014
NC_009523.1|WP_011956212.1|1780282_1782244_-|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.31345e-84
NC_009523.1|WP_011956211.1|1779236_1780205_-|serine/threonine-protein-phosphatase	gnl|CDD|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	2.40324e-73
NC_009523.1|WP_011956214.1|1783338_1784499_-|radical-SAM-protein	gnl|CDD|226727	COG4277, COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only].	4.41922e-101
NC_009523.1|WP_011956218.1|1791593_1792166_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|182012	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional.	1.84595e-55
NC_009523.1|WP_011956209.1|1777253_1777775_-|FHA-domain-containing-protein	gnl|CDD|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	6.41022e-17
NC_009523.1|WP_011956225.1|1800174_1803597_-|helicase	gnl|CDD|197275	cd09178, PLDc_N_Snf2_like, N-terminal putative catalytic domain of uncharacterized HKD family nucleases fused to putative helicases from the Snf2-like family. N-terminal putative catalytic domain of uncharacterized archaeal and prokaryotic HKD family nucleases fused to putative helicases from the Snf2-like family, which belong to the DNA/RNA helicase superfamily II (SF2). Although Snf2-like family enzymes do not possess helicase activity, they contain a helicase-like region, where seven helicase-related sequence motifs are found, similar to those in DEAD/DEAH box helicases, which represent the biggest family within the SF2 superfamily. In addition to the helicase-like region, members of this family also contain an N-terminal putative catalytic domain with one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily.	1.97453e-36

Protein sequences

>NC_009523.1|WP_011956215.1|1785846_1786872_+|WYL-domain-containing-protein
MARRSGGIKRSSWVTFRRRLFLVRQLLRAPASAEELITKVQTELGENGYPANAAAALKHDLDSLKGEYDCRIVYRRDQGKYVIVDLGELALLDLPQQSLEALALLDASYPAGTGNPVHAHIRALLDQVIQMLPNRAQTQLQSRRSTARQRVRSGRIDANVLAAVRQAIEERRELAFRYWGLNDGEAPRRHRVAPYGIFFRNSGHTYLDATLLEVQPPGSEQLFAALDYRLDRIVPGTAQVLPTPLPPERPKARTWTLRYRLHPDVARGEDVAALFPDTRIEYGDDGSALVSATISNLSIARDVLLRYGDRCRVIDPPELIDMIRETVDAMGSLYGSPISSR
>NC_009523.1|WP_011956214.1|1783338_1784499_-|radical-SAM-protein
MSPLIFIEPDARQKLAILSAEATVEATSIPAVASVQEGIRQPEGFIYTATKEGGGTTRLFKVLQTNACRYSCRYCFTSCAVRRSRTTFKPDELATTFMTLHRTRQVDGLFLSSGIVPDANATMEKMLATVERLRLKEGYTGYIHLKLIPGAAFDYIERAIELADRVSLNLEAPNAERLALLAPEKEFASSMWGRMAWAAALIRRARAAGRPAARSLTTQFVVGPAGESDRELLGTAARAHRELDLRRAFFSAFHPIERTPFADLPAGDPLRELRLYQADFMIRDYGFTIDELPFDDNDMLPRDKTPKQAWAERFLCEPVDVNTAPRRLLLRVPGIGPRSADRIIAVRRETRLREPGQLAKLGVVVGWAAPYLLLDGRRLLEQRRLW
>NC_009523.1|WP_011956213.1|1782684_1783308_+|SH3-domain-containing-protein
MESGDPFDPRAPRSPRREQRDTERLDAGNHAEPVNPAWRRTRSAGRQPRGGASFPQELLLWLQYDGWKFVLAAIAIVLAGVVLFVLSQSNAPRPLPAAAPEPQPPIMLTPLPEQPTVTPEPLTSTLSLTPTTPLNVRLRVQGTGALGLFLRPEPNVNTTPIKTLPEGTIVTVVGEDSVQPDRVWKRVRDPEGAEGWAAADYLAPVTP
>NC_009523.1|WP_011956212.1|1780282_1782244_-|serine/threonine-protein-kinase
MALIKKPGTTKGIGANASQSDAGADPQGTAAPGAGARVVAPVMQPGVILQGRYVIEGTLGIGGMSVVYRGRDLRFKDVVRPCAIKEMYQSAPDSNTRLLNLKNFEREAGLLATLQHPAIPKVFDFFEENGRVYLILELIHGKDLETVLSDAGGPLPEERVARWAVQLCEVLAYLHGQKPEPIVFRDMKPSNVMITPEDRIVLIDFGIARSLVRTRGTVIGTEGYSPPEQYKGIAEPQSDLYALGATLHHLLTASDPRTETPFTFHERPLRQLNPQVSPELAAVIEKALSYDMKTRWASAEEMRLALLQTPTLRTHSGGAATAGKVALPRVSSAPTTELVWRFVCEDEVRSSPCVSNGMVFVGCYDTNLYAVDAGRGEFRWKYATEGGISSSPAVWNDIVVVGSEDGAVYACDIRRGALRWTFRTGKPVRSSPRVLDRVIFIGSDDQHFYAIDGLRGAQIWKYRTWMPIRSSGCIVGESVYFGGGDGFVYALSIKNGGVRWKQRTQQPVISSPAFAENMVIVGSMDNTLYALDSEGGWPVWKFRTNHYVNSSPYVFGTRVFVGGVDGNLYAVELKNGKLAWKYDTGSQITSSPRVEQGRVYFGAADGCVYCLDAAHGTLIWRYETQGPVVSSPAISEGVVYIGSLDHALYALRA
>NC_009523.1|WP_011956211.1|1779236_1780205_-|serine/threonine-protein-phosphatase
MSEHTPPEQPDNSPPDQSAAWWSGDDGDGTRPLDTRAVMAQADQDQRPGATEPLDDETLPRETPPAPPAIAAAAMRHIGQIRETNQDSIYTLISSIPRETGDAILGLFIVADGMGGHAGGEIASRMAVSAVARRIIADLLVPAIEGAINVSLQALMVEAVQEANRTIWDQARLIGSDMGTTCTAALLLGRSLYIGHVGDTRAYLIDARGIHQLTSDHSAVGRLIDMGQLDPSEARDHPLRSQLYRTVGQHPEIAVDLVFQPIGDATHLLLASDGLWGCVDDAAMLRIIQTIDSPQRAVRALVDAANRAGGPDNISAVLVRLV
>NC_009523.1|WP_011956210.1|1777851_1779129_-|VWA-domain-containing-protein
MTPGINLQQTLSRTMLAVGDEPQLVYVLLEAHAEGVAQQLPKLPLNLCLVLDRSSSMRGERLMQVKEAAARIVDQLGPDDYFSLVVFNDRADVVIPAQRAIKKSDLKAAIAQIEAAGGTEMAQGLALALQEVQRPFLTRGISRLILLTDGRTYGDESRCVEIARRGQSRGIGLTALGIGTEWNEDLLETMTASENSRAQYIATAQDVVKVFADEVKRLHAIFAQQVHLSLETRPGALIRSLDQVRPFIAPITIVEEEERRWAANLGDWPDTGVQGFLIEVVVPALPVGDYPVLKLTLRYHLPAANLRDQVREELIRISMRPAAEVTHRVDATVKHWLERLVAYRLQASAWKHAAEGRLAEASERLHMAGTRMLNVGDTALAHTLQQEATRILRSGAASEEGRKRIRFGTRGLIGPVASDERETGT
>NC_009523.1|WP_011956209.1|1777253_1777775_-|FHA-domain-containing-protein
MIVCPNCTAKQLDGTIFCTECGASLIDAGPPESTRELDVAAVENHQTPSTSGLPSDENTLSDHVVALIVVSNRRRIEVDLSDEVLIGRADPTRGIMPDVDLGPFGGYDAGVSRRHAILSYRDGTYRVEDLGSANGTFVNGRQIEPMRATPVQPGDEIMCGTLLLRLEGHHRKR
>NC_009523.1|WP_011956208.1|1776995_1777241_-|hypothetical-protein
MARTVILHIAGEDPVLADIEQEPQPGDMFIKVTNMRKRDGKDVPYLAPGVQSVIFPWWRITFVEIMPSEEDRGSVIDFFRT
>NC_009523.1|WP_011956207.1|1776123_1776882_+|hypothetical-protein
MGTRRSRHLHLFLLLALIALLLLTGCTTRAASPGRLFVSDETELLRHLEVAKAAAPLVQRGARVVVLIVERGDNSGDDLTRRLTAINQGHSSHDRIPPDAIAIYVSYEPRYAELRAGKNWSDALTNDVLTDIRTRTLNSALRKDNVTNGVAETLRRFESVLMWRDINNLITIAIIVIIVIVVILIIVGIVRSLLSGNIRWSSDSSDDWSYSSSSRSSSWDSSSDDSRSWGSSSSDSSGGGSGSDSSSSGGSW
>NC_009523.1|WP_011956206.1|1774121_1775480_-|TrpB-like-pyridoxal-phosphate-dependent-enzyme
MKTVKYLLAEDRMPTAWYNIQADLPVPPPPVLHPGTGQPIGPQDLAPLFPMALIMQEVSTGRFIEIPEEVQAIYRQWRPTPLFRARRLERALDTPARIYYKYEGVSPAGSHKPNTAVAQAYYNKQEGVKRLVTETGAGQWGSSLAMAGAFFGLEVLVFMVKVSYQQKPYRRALMEAYGARVVASPSEETNAGRMILAAHPDSTGSLGIAISEAVEVAAQDPDAKYSLGSVLNHVLLHQTVIGEEALAQMELADDYPDIIVGCTGGGSNFSGISFPFIGKKLRGERDVRVVAVEPAACPSMTRGRYAYDFGDTAKMTPLVKMHTLGHDFVPPGIHAGGLRYHGMAPLVSHLLELGVIEAINIQQLETFSAGIQFARAEGIIPAPEANHAVAGAIREALRCKEEGVSRAILFNLCGHGHFDMQAYTDYMAGKLRDYEYSEEEVAMALAGLPAVG
>NC_009523.1|WP_011956217.1|1790727_1791576_-|hypothetical-protein
MHIHSTNDEHDAAFRQALARSGALEPREPTTDLVAGALRRLPHTSPRVAARRAALRQALGRAATVAAVALLVIPAAAGAFNLMRGVETPIGAFASTAGQSQMRAVILAAIGQRLDMPLVRALAGALVWLIQVMAVVLTLGFWPRRSAAAGTTLLAMPFRAFGTGLLSIGLLIAGVAALLTLLTATLAGLPIAAIVVILAHLPVALGIAVSARALGFRLARHSHPPYDLDWHQIMAAAILALPAAMVTFISIPAALLVLYILAIPGIGALIHSQGGLQPVSAA
>NC_009523.1|WP_011956218.1|1791593_1792166_-|sigma-70-family-RNA-polymerase-sigma-factor
MVEQSDEYALIKRSIDGDHDAFAQLMGRYAGSVFNLAYRMLGNAQEAEDASQEIFLRAYTNLARFDQERRFSTWLLSIGSNYCIDRLRRRRFAWLTLDDVVLSVPTSAKGPERSAVEREERDAVQRALLSLPPTYREVAVLRYWNDLSYEEITQVTGLPESTIKTRLHRARRMLAEALRAEGVVHEEIPS
>NC_009523.1|WP_011956219.1|1792377_1792632_+|hypothetical-protein
MAGTYNRDQIRAALALTDPAVSSFLDLQTGNVVSITEGDPSPANQELSALIMESYGDRFRYIPGGNPAADDAAVSAWLENEGLM
>NC_009523.1|WP_011956220.1|1792693_1793881_-|phosphoglycerate-kinase
MAKKTIRDIDWSGKRALVRVDFNVPLENGQITDDTRIRAALPTIRYLLEHGAAVILMSHLGRPKNKVVESMRLAPVVARLAELLPEAKAIKGTQATTGPAAEAAAQDLKPGEVLVLENTRFDPREEANDESMARELAKLGDVYVNDAFGSAHRAHASTEGVARFLPAVAGFLMEAELAALQGALENPTRPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGYEMGDSLVEPDSVPVAKDLLEKAASRGVRFMLPTDVVIADAFSADANRRVVSVGDIPPGWRVLDIGPETVRAYTEIITTAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPGMTIVGGGDSVAAVEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA
>NC_009523.1|WP_011956221.1|1794012_1794660_-|hypothetical-protein
MNIERLHIRDTAYPVALRERLGKRAPEHVFLLGNPELLQYDPLGLFCSTKCPGNIILKTYDLARALRDARVPVIGGFHTPMEKECLAVLLRGPQPVIVCPARGLEGVRPVTEVRDGIRAGRVLLVSIFAPKQRRATADLADQRNRFVAALASRSFVSHAAPGGKTEALCREMIAMGKTLFTVDAPENANLLTLGAQPLVIQDLRVFKEGDSGNTK
>NC_009523.1|WP_011956222.1|1794656_1795736_-|DUF3644-domain-containing-protein
MNRFPRAARDALQKARDAALLAVEVYNKPAVTFKSGGYITLMIIAWTALFHAIFFRCGVEPYYRSDRRKQKSPYLRVDGDYKHWELTECLKQYYGDDTGNPVRKNLEFFIPLRNKIEHRSLPEIDPLIFGECQAMLLNFDAMLAKEFGSRYCLRQSLSFALQMYPSSSNLAEAVRRNPAARDAADFIEKYRSSISADVFQSSQYAFKAFLIQVANHKSKDALAIQFIHYDKLSEEEKEQFQAFIAVKYKQVPVANLDNLRAKDVVRRVQQAFGDPKITRNGKQRDKFNLAWHTRCWQRYKVRPDSKSSNPEMTNSKYCIYDKAHSDYVYTEAWVQFLIEKFKDEKEYEALFAKTAESPA
>NC_009523.1|WP_011956223.1|1795732_1796476_-|hypothetical-protein
MNLTITLAIVNAMTIETDVFSTTYYRWRSGIESDRDSLFQRIEYLRLSVPRSHANSFPKIGKDVEARILTKICGYNKKFKDFYSSRGKSIYYHSGGRYWRKALLEKLSSHYKGISVDRRAAPIAFCLLNSQLFYWYWITNSNCMDVVSREVDEMPIFDFAMSSPEIFTNLQSEILRAYSRHSEIRQRRGAIILTDETNFDVKHSKPIIDEIDRVLARHYGFTDEELDFIINYDIKYRMGSDAAEDEE
>NC_009523.1|WP_085979421.1|1796589_1797647_+|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_011956224.1|1797653_1800170_-|SAM-dependent-methyltransferase
MKFDVDAVRNCLKSFDFQTLFREHLGWDNHNQRLEVAVGNQTYALTAVAQKRGFVAFTCPAIPDRATRLKIDNHVTRSAREHFVIYVDRPGGQQVWHWVRREPGKPLASRDHRFYVSQSGDPLIQRLNQIAVSLDEEERITVVDVAGRARAAFDVDRVTRRFYDRFKAEHEAFRKLIQGITSDADLQWYTSLMLNRLMFVYFIQKKGFLDGDTDYLRNRLAQVQAVRGSNKFHSFYRYFLLRLFHEGLGKSPDERALDPTFEKLLGNVPFLNGGFFEVHDLEARWPEIDIPDAAFEKLFDFFDQYAWHLDERPLRADNEINPDVVGYIFEKYINQKQMGAYYTKEDITEYISKNTIIPFIFDVASKACAVAFKPDSALWRLLRDDPDRYIYPAVRHGVVRADGSIVPESDLPDFVQKGMHDPKARMHDRRYNLEQAPSGDLLRLATETWREYVYRRNRCLEIREKLRNGEVHQINDLITLNLDIWQFARDAIVQCEGPELLRAFWHAIENITVLDPTCGSGAFLFAALRILETLYSDCLERMERFVEDLQGKKHHPEQFSDFKRVLEQIGKHPNERYFILKSIIINNLYGVDIMEEAVEICKLRLFLKLAAQVERVEQIEPLPDIDFNIRAGNTLVGYATAEDVRKAFHEKKVGEAVQHKLLLGSAAEEYEQFQEDLELADRAFVQFRAQQTTHGGRITHRDKQELRHRLETLTAQLDRFLAGEYGVDLEKPQAFEAWKASHQPFHWFAEFYGIMRNGGFNVIIGNPPYVSYTKVRSEYQVKGFATEPCANLYAFVTERGFRLASEGGRFGMIVPIASVSTNGMKELQSIYREQAKQQ
>NC_009523.1|WP_011956225.1|1800174_1803597_-|helicase
MPQIFDNIEKHLLSALTDAMKLSERADFCVGYFNLRGWKQLSPLVDRWAGGEGHCCRLLVGMQQMPQDQLKQALRFGRDGHDIDQATATVLKRKLAQEFRDQLIVGVPTNEDEAGLQRLASQIVAKKVVVKLFLRHPLHAKLYLLFRRDPLNPKIGYLGSSNLTLAGLAGQGELNIDVLDHDACDKLARWFEDRWNDRFCLDISKELVEIINESWARTEPIPPYYIYIKIAYHLSQEARAGLTEFRIPSDFDNKLLEFQKAAVKIAAHHLNKRGGVVIGDVVGLGKTLMATALARIFEDDYGVETLIICPKNLVPMWEDYRQQYRLRAMVLSITRVQQELPNLRRFRLVVIDESHNLRNRNSKRYRAIADYIASNDSRVILLSATPYNKTYLDLSNQLRLFIDESRDIGIRPERLLRDLGETEFVRRYQCPVRSLAAFEKSEYADDWRDLMRLYLIRRTRTFIQENYAKLDPAQNRKYLEFANGARSYFPTRVPKTVKFTINENDPADQYARLFADDVVQRVNNLTLPRYGLGNYLKPSSHKRSTAEEARVLADLSRAGTRLKGFCRTNLFKRLESSGYSFILSLERHILRNYIFLHAIEQGLPLPIGAQDMGLLDTWANDQDSDLWEAATEDDNDDTPRELDKPARSQLTEREIQRRAAGIYNVYATQFKRCFKWLRLELFNKEALARDLRKDAQALMEVLTLVGVWDAAQDEKLKALLELLKERHPEEKVLVFSQFADTVKYLEEQLEAHGLHAIAAVTGDTADPTAIAYRFSPVSNERRDRIAPEDELRVVLTTDVLSEGQNLQDCSIIVNYDLPWAIIRLIQRAGRVDRIGQKSDRILCYSFLPADGVERIIRLRARVMQRLRENAEVVGADEAFFEGERNDRSLHDLYTEKAGILDGDEDTEVDLASYAYQIWKNAIDQYPELEKLIPALPNVVYSTKPHQPASDRPEGALVYLRTAEGNDALAWIDAQGNSVTESQFAILKAAECAPDTQALPRAENHHDLVARGVQLIVETEKSVGGQLGRPSGARFRTYERLKRYAEQLKGTLFESADLLKAIEDIYRHPLLQSATDTLNRQLKSGVSDEDLASLVIALRQDGRLCRVEEDGATGEPQVICSLGLRRADYQVPGASSGTERT

Crispr_ID: NC_009523_34

• CRISPR_ID: NC_009523_34
• CRISPR_location: 1804007-1804119
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_34

Consensus_repeat	Method
ATGTCAACGCCTGTGCCCAACGTTCAACGGTTGCCGCTT	CRISPRCasFinder

spacers of NC_009523_34

>34.1|1804046|35|NC_009523|CRISPRCasFinder
TCTCTTTTCTCTCTCCTCACTCCTCTTCCCTCACT

CRISPR arrays and Neighbor proteins around NC_009523_34

CRISPR arrays

The CRISPR arrays of NC_009523_34

>merge|NC_009523|34|1804007-1804119|CRISPRCasFinder
ATGTCAACGCCTGTGCCCAACGTTCAACGGTTGCCGCTTTCTCTTTTCTCTCTCCTCACTCCTCTTCCCTCACTATGTCAACGCCTGTGCCCGACGTTCAACGGTTGCCGCTT

>NC_009523|34|31|1804007-1804119|CRISPRCasFinder
ATGTCAACGCCTGTGCCCAACGTTCAACGGTTGCCGCTT	TCTCTTTTCTCTCTCCTCACTCCTCTTCCCTCACT
ATGTCAACGCCTGTGCCCGACGTTCAACGGTTGCCGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956224.1|1797653_1800170_-|SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|380297
NC_009523.1|WP_011956222.1|1794656_1795736_-|DUF3644-domain-containing-protein	unknown	unknown	gnl|CDD|378842
NC_009523.1|WP_157041270.1|1808135_1811843_-|alpha-amylase	unknown	unknown	gnl|CDD|200485
NC_009523.1|WP_157041002.1|1814082_1814826_+|DUF2726-domain-containing-protein	unknown	unknown	gnl|CDD|371282
NC_009523.1|WP_011956225.1|1800174_1803597_-|helicase	unknown	unknown	gnl|CDD|197275
NC_009523.1|WP_011956220.1|1792693_1793881_-|phosphoglycerate-kinase	unknown	unknown	gnl|CDD|234613
NC_009523.1|WP_085979421.1|1796589_1797647_+|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011956235.1|1817279_1818809_-|apolipoprotein-N-acyltransferase	unknown	unknown	gnl|CDD|223885
NC_009523.1|WP_011956223.1|1795732_1796476_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956228.1|1806092_1807019_+|cation-transporter	unknown	unknown	gnl|CDD|223131
NC_009523.1|WP_011956221.1|1794012_1794660_-|hypothetical-protein	unknown	unknown	gnl|CDD|223829
NC_009523.1|WP_041333289.1|1814981_1816013_+|sulfurtransferase	unknown	unknown	gnl|CDD|225450
NC_009523.1|WP_011956217.1|1790727_1791576_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956218.1|1791593_1792166_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|182012
NC_009523.1|WP_011956227.1|1804872_1806039_-|hypothetical-protein	unknown	unknown	gnl|CDD|185680
NC_009523.1|WP_011956234.1|1816019_1817258_+|YeeE/YedE-family-protein	unknown	unknown	gnl|CDD|377230
NC_009523.1|WP_011956219.1|1792377_1792632_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956231.1|1812623_1813877_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956226.1|1804178_1804898_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212491
NC_009523.1|WP_011956229.1|1807167_1808136_-|quinone-oxidoreductase	unknown	unknown	gnl|CDD|176189

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956224.1|1797653_1800170_-|SAM-dependent-methyltransferase	gnl|CDD|380297	NF033455, BREX_6_MTaseX, BREX-6 system adenine-specific DNA-methyltransferase PglX.	2.87044e-11
NC_009523.1|WP_011956222.1|1794656_1795736_-|DUF3644-domain-containing-protein	gnl|CDD|378842	pfam12358, DUF3644, Protein of unknown function (DUF3644). This domain family is found in bacteria, and is typically between 65 and 80 amino acids in length.	5.01756e-22
NC_009523.1|WP_157041270.1|1808135_1811843_-|alpha-amylase	gnl|CDD|200485	cd11347, AmyAc_1, Alpha amylase catalytic domain found in an uncharacterized protein family. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	1.10073e-60
NC_009523.1|WP_157041002.1|1814082_1814826_+|DUF2726-domain-containing-protein	gnl|CDD|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	1.1796e-30
NC_009523.1|WP_011956225.1|1800174_1803597_-|helicase	gnl|CDD|197275	cd09178, PLDc_N_Snf2_like, N-terminal putative catalytic domain of uncharacterized HKD family nucleases fused to putative helicases from the Snf2-like family. N-terminal putative catalytic domain of uncharacterized archaeal and prokaryotic HKD family nucleases fused to putative helicases from the Snf2-like family, which belong to the DNA/RNA helicase superfamily II (SF2). Although Snf2-like family enzymes do not possess helicase activity, they contain a helicase-like region, where seven helicase-related sequence motifs are found, similar to those in DEAD/DEAH box helicases, which represent the biggest family within the SF2 superfamily. In addition to the helicase-like region, members of this family also contain an N-terminal putative catalytic domain with one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), and have been classified as members of the phospholipase D (PLD, EC 3.1.4.4) superfamily.	1.97453e-36
NC_009523.1|WP_011956220.1|1792693_1793881_-|phosphoglycerate-kinase	gnl|CDD|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NC_009523.1|WP_085979421.1|1796589_1797647_+|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011956235.1|1817279_1818809_-|apolipoprotein-N-acyltransferase	gnl|CDD|223885	COG0815, Lnt, Apolipoprotein N-acyltransferase [Cell envelope biogenesis, outer membrane].	6.62662e-45
NC_009523.1|WP_011956229.1|1807167_1808136_-|quinone-oxidoreductase	gnl|CDD|176189	cd05286, QOR2, Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NC_009523.1|WP_011956228.1|1806092_1807019_+|cation-transporter	gnl|CDD|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	9.05796e-81
NC_009523.1|WP_011956221.1|1794012_1794660_-|hypothetical-protein	gnl|CDD|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	2.56376e-05
NC_009523.1|WP_041333289.1|1814981_1816013_+|sulfurtransferase	gnl|CDD|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	7.77179e-101
NC_009523.1|WP_011956218.1|1791593_1792166_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|182012	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional.	1.84595e-55
NC_009523.1|WP_011956226.1|1804178_1804898_+|SDR-family-oxidoreductase	gnl|CDD|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.15095e-71
NC_009523.1|WP_011956234.1|1816019_1817258_+|YeeE/YedE-family-protein	gnl|CDD|377230	pfam04143, Sulf_transp, Sulphur transport. This is an integral membrane protein. It is predicted to have a function in the transport of sulphur-containing molecules. It contains several conserved glycines and an invariant cysteine that is probably an important functional residue.	6.69781e-49
NC_009523.1|WP_011956227.1|1804872_1806039_-|hypothetical-protein	gnl|CDD|185680	cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.	6.04303e-13

Protein sequences

>NC_009523.1|WP_011956225.1|1800174_1803597_-|helicase
MPQIFDNIEKHLLSALTDAMKLSERADFCVGYFNLRGWKQLSPLVDRWAGGEGHCCRLLVGMQQMPQDQLKQALRFGRDGHDIDQATATVLKRKLAQEFRDQLIVGVPTNEDEAGLQRLASQIVAKKVVVKLFLRHPLHAKLYLLFRRDPLNPKIGYLGSSNLTLAGLAGQGELNIDVLDHDACDKLARWFEDRWNDRFCLDISKELVEIINESWARTEPIPPYYIYIKIAYHLSQEARAGLTEFRIPSDFDNKLLEFQKAAVKIAAHHLNKRGGVVIGDVVGLGKTLMATALARIFEDDYGVETLIICPKNLVPMWEDYRQQYRLRAMVLSITRVQQELPNLRRFRLVVIDESHNLRNRNSKRYRAIADYIASNDSRVILLSATPYNKTYLDLSNQLRLFIDESRDIGIRPERLLRDLGETEFVRRYQCPVRSLAAFEKSEYADDWRDLMRLYLIRRTRTFIQENYAKLDPAQNRKYLEFANGARSYFPTRVPKTVKFTINENDPADQYARLFADDVVQRVNNLTLPRYGLGNYLKPSSHKRSTAEEARVLADLSRAGTRLKGFCRTNLFKRLESSGYSFILSLERHILRNYIFLHAIEQGLPLPIGAQDMGLLDTWANDQDSDLWEAATEDDNDDTPRELDKPARSQLTEREIQRRAAGIYNVYATQFKRCFKWLRLELFNKEALARDLRKDAQALMEVLTLVGVWDAAQDEKLKALLELLKERHPEEKVLVFSQFADTVKYLEEQLEAHGLHAIAAVTGDTADPTAIAYRFSPVSNERRDRIAPEDELRVVLTTDVLSEGQNLQDCSIIVNYDLPWAIIRLIQRAGRVDRIGQKSDRILCYSFLPADGVERIIRLRARVMQRLRENAEVVGADEAFFEGERNDRSLHDLYTEKAGILDGDEDTEVDLASYAYQIWKNAIDQYPELEKLIPALPNVVYSTKPHQPASDRPEGALVYLRTAEGNDALAWIDAQGNSVTESQFAILKAAECAPDTQALPRAENHHDLVARGVQLIVETEKSVGGQLGRPSGARFRTYERLKRYAEQLKGTLFESADLLKAIEDIYRHPLLQSATDTLNRQLKSGVSDEDLASLVIALRQDGRLCRVEEDGATGEPQVICSLGLRRADYQVPGASSGTERT
>NC_009523.1|WP_011956224.1|1797653_1800170_-|SAM-dependent-methyltransferase
MKFDVDAVRNCLKSFDFQTLFREHLGWDNHNQRLEVAVGNQTYALTAVAQKRGFVAFTCPAIPDRATRLKIDNHVTRSAREHFVIYVDRPGGQQVWHWVRREPGKPLASRDHRFYVSQSGDPLIQRLNQIAVSLDEEERITVVDVAGRARAAFDVDRVTRRFYDRFKAEHEAFRKLIQGITSDADLQWYTSLMLNRLMFVYFIQKKGFLDGDTDYLRNRLAQVQAVRGSNKFHSFYRYFLLRLFHEGLGKSPDERALDPTFEKLLGNVPFLNGGFFEVHDLEARWPEIDIPDAAFEKLFDFFDQYAWHLDERPLRADNEINPDVVGYIFEKYINQKQMGAYYTKEDITEYISKNTIIPFIFDVASKACAVAFKPDSALWRLLRDDPDRYIYPAVRHGVVRADGSIVPESDLPDFVQKGMHDPKARMHDRRYNLEQAPSGDLLRLATETWREYVYRRNRCLEIREKLRNGEVHQINDLITLNLDIWQFARDAIVQCEGPELLRAFWHAIENITVLDPTCGSGAFLFAALRILETLYSDCLERMERFVEDLQGKKHHPEQFSDFKRVLEQIGKHPNERYFILKSIIINNLYGVDIMEEAVEICKLRLFLKLAAQVERVEQIEPLPDIDFNIRAGNTLVGYATAEDVRKAFHEKKVGEAVQHKLLLGSAAEEYEQFQEDLELADRAFVQFRAQQTTHGGRITHRDKQELRHRLETLTAQLDRFLAGEYGVDLEKPQAFEAWKASHQPFHWFAEFYGIMRNGGFNVIIGNPPYVSYTKVRSEYQVKGFATEPCANLYAFVTERGFRLASEGGRFGMIVPIASVSTNGMKELQSIYREQAKQQ
>NC_009523.1|WP_085979421.1|1796589_1797647_+|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_011956223.1|1795732_1796476_-|hypothetical-protein
MNLTITLAIVNAMTIETDVFSTTYYRWRSGIESDRDSLFQRIEYLRLSVPRSHANSFPKIGKDVEARILTKICGYNKKFKDFYSSRGKSIYYHSGGRYWRKALLEKLSSHYKGISVDRRAAPIAFCLLNSQLFYWYWITNSNCMDVVSREVDEMPIFDFAMSSPEIFTNLQSEILRAYSRHSEIRQRRGAIILTDETNFDVKHSKPIIDEIDRVLARHYGFTDEELDFIINYDIKYRMGSDAAEDEE
>NC_009523.1|WP_011956222.1|1794656_1795736_-|DUF3644-domain-containing-protein
MNRFPRAARDALQKARDAALLAVEVYNKPAVTFKSGGYITLMIIAWTALFHAIFFRCGVEPYYRSDRRKQKSPYLRVDGDYKHWELTECLKQYYGDDTGNPVRKNLEFFIPLRNKIEHRSLPEIDPLIFGECQAMLLNFDAMLAKEFGSRYCLRQSLSFALQMYPSSSNLAEAVRRNPAARDAADFIEKYRSSISADVFQSSQYAFKAFLIQVANHKSKDALAIQFIHYDKLSEEEKEQFQAFIAVKYKQVPVANLDNLRAKDVVRRVQQAFGDPKITRNGKQRDKFNLAWHTRCWQRYKVRPDSKSSNPEMTNSKYCIYDKAHSDYVYTEAWVQFLIEKFKDEKEYEALFAKTAESPA
>NC_009523.1|WP_011956221.1|1794012_1794660_-|hypothetical-protein
MNIERLHIRDTAYPVALRERLGKRAPEHVFLLGNPELLQYDPLGLFCSTKCPGNIILKTYDLARALRDARVPVIGGFHTPMEKECLAVLLRGPQPVIVCPARGLEGVRPVTEVRDGIRAGRVLLVSIFAPKQRRATADLADQRNRFVAALASRSFVSHAAPGGKTEALCREMIAMGKTLFTVDAPENANLLTLGAQPLVIQDLRVFKEGDSGNTK
>NC_009523.1|WP_011956220.1|1792693_1793881_-|phosphoglycerate-kinase
MAKKTIRDIDWSGKRALVRVDFNVPLENGQITDDTRIRAALPTIRYLLEHGAAVILMSHLGRPKNKVVESMRLAPVVARLAELLPEAKAIKGTQATTGPAAEAAAQDLKPGEVLVLENTRFDPREEANDESMARELAKLGDVYVNDAFGSAHRAHASTEGVARFLPAVAGFLMEAELAALQGALENPTRPFVTIIGGAKISDKIGVIENLLGKVDALLIGGGMANTFLLAQGYEMGDSLVEPDSVPVAKDLLEKAASRGVRFMLPTDVVIADAFSADANRRVVSVGDIPPGWRVLDIGPETVRAYTEIITTAQTVIWNGPMGVFELAPFAEGTRAIAQAMANCPGMTIVGGGDSVAAVEQMGLADKIRHISTGGGASLELLEGRILPGVAALNDA
>NC_009523.1|WP_011956219.1|1792377_1792632_+|hypothetical-protein
MAGTYNRDQIRAALALTDPAVSSFLDLQTGNVVSITEGDPSPANQELSALIMESYGDRFRYIPGGNPAADDAAVSAWLENEGLM
>NC_009523.1|WP_011956218.1|1791593_1792166_-|sigma-70-family-RNA-polymerase-sigma-factor
MVEQSDEYALIKRSIDGDHDAFAQLMGRYAGSVFNLAYRMLGNAQEAEDASQEIFLRAYTNLARFDQERRFSTWLLSIGSNYCIDRLRRRRFAWLTLDDVVLSVPTSAKGPERSAVEREERDAVQRALLSLPPTYREVAVLRYWNDLSYEEITQVTGLPESTIKTRLHRARRMLAEALRAEGVVHEEIPS
>NC_009523.1|WP_011956217.1|1790727_1791576_-|hypothetical-protein
MHIHSTNDEHDAAFRQALARSGALEPREPTTDLVAGALRRLPHTSPRVAARRAALRQALGRAATVAAVALLVIPAAAGAFNLMRGVETPIGAFASTAGQSQMRAVILAAIGQRLDMPLVRALAGALVWLIQVMAVVLTLGFWPRRSAAAGTTLLAMPFRAFGTGLLSIGLLIAGVAALLTLLTATLAGLPIAAIVVILAHLPVALGIAVSARALGFRLARHSHPPYDLDWHQIMAAAILALPAAMVTFISIPAALLVLYILAIPGIGALIHSQGGLQPVSAA
>NC_009523.1|WP_011956226.1|1804178_1804898_+|SDR-family-oxidoreductase
MRLQGRVAIIIGASSGVGYETARRLAREGVSVVAAARRRDRLESLVAEIAGEGGRAVAIPTDVTDSEQVERLVESAVNLFGRVDILVNSAGVTHKIAPLEQFSNDDFRLVIETNLHGTFYAARAVIPHMKRQRSGTIVNIASRVGKIGIANIAPFCAAKFALDGLSQALGAELRPYNVFVTTIFPGLINTELEPLNPGEEFRRRLMTAADVAEVILWVCTLPPTVRVDELPIMPRQIDM
>NC_009523.1|WP_011956227.1|1804872_1806039_-|hypothetical-protein
MMPMPQETITSIHQTPHRLVFEFAGAGSLALFWLHSVPGSSRTVLEATDRYAAASLADLIGATPEKFVSAATARAMAEAAYRRALRLTDGAAPCLGVACTAAIATDRVKRGDHGCSVAVYDGATLRVSRLTLAKGARDRAGEEALISLLIIRAIAEACGVAPPALALEPSETVEVEEEASPDPLMLLLNGDIAAVFVGKDGRICREGAPPAALLSGSFNPLHAGHEYLAQAAAVVLDTPVTFELPVLNADKPPLRYIELERRLDQFRGRYPVVLTRAPLFVQKADLFPGCTFVIGYDTALRIIDPRYYDGEAGRDAAFARIAAQRCTFLVAGRVRDGIFRTLADIDMPPALRPLFRELPERLFRIDLSSTAIRNASAAHEVTCRSDAA
>NC_009523.1|WP_011956228.1|1806092_1807019_+|cation-transporter
MNGRATLTRFAWLSIAAAIVTISLKAGAYLVTGSVGLLSDALESLVNLVAAIIALIALTIAAQPPDEDHSYGHEKAEYFSSGVEGALILIAALSIAFAAVGRILHPQPIEQPELGLTIAVIASLVNLVVAQILIRAGRRYESITLEADAHHLMTDVYTSAGVIVGVALVSLTGWYLLDPLIALAVAGHIVWTGVQLLRRSVAGLMDTSLPAAEREVLDATLAPFRDEGIIFHALRTRQSGARRFVSFHVLVPGTWSVRRGHTLLEQVERDVRKALPNTTVFTHLEPIEDPASFQDTALDRVEETKDQH
>NC_009523.1|WP_011956229.1|1807167_1808136_-|quinone-oxidoreductase
MRAIRVHDYGGPEVLRLEDLPVPEPGPGEARVKIAAAGVNFIDIYHRSGQYKGVLPMTPGMEAAGIVDAVGPDVSDVRVGDRVVYAMRQGAYAEYAIVPATMLAPVPEGIDLHQAAAVMLQGMTAHYLTHSTYPLRPGEVALIHAAAGGVGLLLVQIAKRCGARVIGTVSTEEKAALAREAGADDIILYTQEDFSAAVRRLTDGVGVHVVYDSVGKTTFEGSLNCLRPRGYMVLFGQSSGAVPPFDPQVLNAKGSLFLTRPSLGHYLLTRDELLWRAGDLFAWMAAGELKVRIDATYPLEQAAEAHRALASRATSGKLLLLP
>NC_009523.1|WP_157041270.1|1808135_1811843_-|alpha-amylase
MRLEYSVDLSRITGAPVMEFHVARSARDRYHFDESLFQFSGNVIFANFHAARVFAQKMNQKRDLARFPEQAVRAGQISAMGLLDEILHYVAQLYRQRVKERLLADALTWLNERLGAEKVETALRAFSDEFPPIAVYRREQTIEAYLEGSTASTPHREVALEEMLMLWLENMNPAFNPFLELFDDSRLKHDTVYLKIIEELDRFFETQPPPAAVLPGVSSRTLIELLRAPALASPYSIEGQLNYVLEHWAGFLDRAFLYRLLSSLDVIKEEERARFGVGGGDLTGAYVPVADYRYLEAEPERYTPDREWMPRLVLLAKNTFVWLDQLSKWYGRPIKTLDQVPDEELDTMARRGFTGLWLIGLWERSQASKRIKQIMGNPDAVASAYSLYDYQIAAALGGQPALDNLRARAWQRGIRLSADMVPNHVGIDGRWVIEHPDWFIQLDYPPFPTYTFNGPDLSSDERVGIFIEDHYYDRSDAAVVFKRLDRWTGQARYIYHGNDGTSMPWNDTAQLNYLKPEVREAVIQTILHVARQFPIIRFDAAMTLTKRHYHRLWFPEPGTGGDIPSRAGFGMTRAQFDAVMPEEFWREVVDRCAVEAPDTLLLAEAFWLMEGYFVRTLGMHRVYNSAFMVCLRDEENAKYRQIMKNVLEFDPEVLRRFVNFMNNPDERTAVDQFGKGDKYFGVCTMLVTMPGLPMFGHGQIEGFAEKYGMEYYRAYWDEKPDEWLIARHEREIFPLLHRRHLFAGTDHFLLYDFYMPDGHVNEDVFAFSNRYGNERALVVYHNRYAHTSGWVRLSAAFMARTGKGDERTLTQRTLAEGLALRAGDNNYTIFRDHRNGLEYIRHSRDLAERGLYVELGPYGCHVFLDFREVTEYPDGRYAQITAYLGGRGVPSIDIALREMFLQPVLTPFRELVSAATLRELAAWADRRAVQRGVLPAFDGADNDRIDSMLEGPDAFDEPTPEELQALAQRRSTPESAVAPSTPVPTTPEQTETAAIERFEQHLRTFLTEFAAFTGSTVDTNRIVTDVVHRLETMIDLMVCADEHQAQRIGAPLADDPARWGTAIAWATLHRLGLMVAADDIAGQSRSLIDEYLLGRALQAALVEFGYSDDTAADAALLVKILTTRQRWHATFADEYHALASALMSDGDVQLFTRVNRFQGVLWFNKERFERLLRWLDLIAVATLQVEATPDADAIRADCAQTIERLIDAAEQSGYRVEQLLAVSQSEESLTDTGAE
>NC_009523.1|WP_011956231.1|1812623_1813877_+|hypothetical-protein
MSRTSTERLLQQQIQTLFPRLSRHRRRALARWVLGALLAGSANRPALAPALATAGIARAATLADAWDAWIAAPAHLINTADPPAAGAPPVVSPLACGADLLRWIRAHWTGGPLVLGLDASHRRDDVVLLRMSVLYRGAALPVAWVIVPANQPGAWEPHWERMLRWARSALPRDQEVLVLADQGLWSPRLWHAIRSQQFHPIMRVRTTSTFAPTGQARQSVLRLAPGPGHGWVGVGVAFTHAPKRIAGTLAVAWGADHAEPWVLLTDLPPAQVDAAWYALRSWDEAGFRQSTSMGWDWQRGQVTDSDAVAWQYLVVATVTLWTVAVGTRIEDAEQQGVPPGRLKRAPPTTGAPPRRRWSGTAQRVISLLRRGAGRRLRWLLAQGRCWVRLWLRPEPLPKIGDSVTMHIYDPSQCLKSP
>NC_009523.1|WP_157041002.1|1814082_1814826_+|DUF2726-domain-containing-protein
MDPIITMTAAIASLLVVAGCVVALAAMRPRRRTATSSRSMSPRASAVSRGASGEPEFLPRLPYTRAPHLLAGDHRALFAALNAAAPDDLAVLPHVRLSDILHVEPHTTQSERYQERIRDSVLDFVLCDAQTTTPRLAVLFAQPGAARRTAFIDAALIGAGVPVLRLTRDDLPSVEALATQIAALLGLPVRPAAAPFERAALPDGASTAFRQDVLVVARTPVRYACGRCHRDISAHVHRCPHCGAPLA
>NC_009523.1|WP_041333289.1|1814981_1816013_+|sulfurtransferase
MDRTLLRTAGAAIAGALVTLAVVALIFFVRQPAGTSSTTAPSAADASSAPVAVNPPREPRKFEDVVVSTEWLAQNLDNPKVRVIEVSVVPGVYERGHIPGAVNFVWTTDFVDTVSRNIIAPERFQELARAAGINNDTTIVLYGDNNNWFAAWGAWVFRQYGAEDVRLLDGSRSKWEAENRELSTRAPTYPPGNFTVRQRSDLRVFLPDVLKVVRGEEQKVLVDIRSPDEFSGKIFAPEGFQELAVRAGHIPGAVNVPWKKALNEDGTFKSVEELRKLYAEAGVDGSKPVITYCRIGERASHTWFVLSEILGYQVALYDGSWTEYGNSVGVPIANPAGTIWGVK
>NC_009523.1|WP_011956234.1|1816019_1817258_+|YeeE/YedE-family-protein
MSNALPGSSPADRAAPSKPVLTPALILRNGGAALIFVTLLIGAHVLQTTSGYGASAALSLLIGAALGVVFERGRFCFFCIFRDFIEHRNAGPLYAILTALAVSGIGYAVVFGAFLPNPFSGRLAPDAHIGPVSLALVVAGLLFGVGMALSGACISGHLYRLGEGSGYAPLALIGALIGFGLGFRTWNWLYVTVIADAPVIWLPHWIGYGGALLLHLAVLSVLAFALLRYVSPLPPRPAHQLDIKYLYEALFRDRWNPLVTGAIVGVIGVVAYLRVEPLGVTAQLGSLARTVMHTSGMLPARLNGLDSFAGCATQVVQTITDNGWLIGGLALGAFGAALIAGRFQPALPRANGSVAALVGGVLMGWGAMTALGCTVGTLLSGIAAFALSGWVFGAAVFAGVWGGIVLRLHRWT
>NC_009523.1|WP_011956235.1|1817279_1818809_-|apolipoprotein-N-acyltransferase
MLITRTRTAPENAATAMSWGISLALAVLSGFLIGASMPTLLDWGFLGWVGLAPVLIALNVQPPHRRFLVALPFGIVWSAMTHLWYPALFGVGMGIFLVAAVGAFYAGVLQAGMALQERLPEPLRILGMPVAWAALEFVRSVAPVVGDWWIELLAKSQWRFPPALQLLAITGVPGLSFLLMLANVAIALLILETWRQQRVHLPAVLALAGSALILGWGALSIPPAPDAQFRIAATVDLVNQDRAVQALSRLPVGQEGYYADTPEMSQAIFDTNATLTRQVAALRPAFVVWPENEFADADDPAFAAQVGALARELNAYLVVDMVWRTSEGMHDAAVLFGPDGNEVGRHAKINLTGDEQAFGFVPGPRDFQVFTTPYGNVGLGVCWDRHVPWITRELARAGAHVVLMPVDDDFYGNRWFPPLHAADSVLRAAENRVAFGLGATSGIAMVIDPYGRITAESAINQRGVVTGEAFTVPERTLYTRLGDWFGWSITGAMVIGLLWQGRGRAHHQQ

Crispr_ID: NC_009523_35

• CRISPR_ID: NC_009523_35
• CRISPR_location: 1889811-1889910
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_35

Consensus_repeat	Method
AATAATCCGGTCTAGCCCGCGCAGGCGGGCTT	CRISPRCasFinder

spacers of NC_009523_35

>35.1|1889843|36|NC_009523|CRISPRCasFinder
CGCCCTGGATAGCCGAGGGCTTATGGTCTTTGAAGA

CRISPR arrays and Neighbor proteins around NC_009523_35

CRISPR arrays

The CRISPR arrays of NC_009523_35

>merge|NC_009523|35|1889811-1889910|CRISPRCasFinder
AATAATCCGGTCTAGCCCGCGCAGGCGGGCTTCGCCCTGGATAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCCGGTATAGCCCGCGCAGGCGGGCTT

>NC_009523|35|32|1889811-1889910|CRISPRCasFinder
AATAATCCGGTCTAGCCCGCGCAGGCGGGCTT	CGCCCTGGATAGCCGAGGGCTTATGGTCTTTGAAGA
AATAATCCGGTATAGCCCGCGCAGGCGGGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956292.1|1896766_1898617_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl|CDD|274738
NC_009523.1|WP_011956285.1|1885119_1886406_-|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380561
NC_009523.1|WP_011956293.1|1898971_1900018_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl|CDD|235604
NC_009523.1|WP_011956281.1|1880642_1881347_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223487
NC_009523.1|WP_011956296.1|1902940_1903720_+|enoyl-ACP-reductase	unknown	unknown	gnl|CDD|223696
NC_009523.1|WP_011956289.1|1892317_1893868_+|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|179543
NC_009523.1|WP_157041274.1|1887628_1889500_-|glycosyl-hydrolase	unknown	unknown	gnl|CDD|271234
NC_009523.1|WP_083763273.1|1883224_1883827_-|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119323
NC_009523.1|WP_011956282.1|1881333_1882062_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213186
NC_009523.1|WP_041333317.1|1900175_1900451_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041007.1|1890088_1891984_-|glycosyl-hydrolase	unknown	unknown	gnl|CDD|374209
NC_009523.1|WP_011956280.1|1879692_1880625_-|3-keto-5-aminohexanoate-cleavage-protein	unknown	unknown	gnl|CDD|377562
NC_009523.1|WP_011956284.1|1884243_1885113_-|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119324
NC_009523.1|WP_157041006.1|1886433_1887123_-|FCD-domain-containing-protein	unknown	unknown	gnl|CDD|224715
NC_009523.1|WP_011956295.1|1901384_1902464_-|hypothetical-protein	unknown	unknown	gnl|CDD|184875
NC_009523.1|WP_011956290.1|1894196_1895738_+|carboxypeptidase-M32	unknown	unknown	gnl|CDD|341054
NC_009523.1|WP_011956294.1|1900770_1901382_+|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl|CDD|178955
NC_009523.1|WP_011956291.1|1895792_1896509_+|hypothetical-protein	unknown	unknown	gnl|CDD|226755
NC_009523.1|WP_049767484.1|1883830_1884229_-|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119323
NC_009523.1|WP_011956283.1|1882082_1882844_-|cyclase-family-protein	unknown	unknown	gnl|CDD|377240

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956292.1|1896766_1898617_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl|CDD|274738	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit. This family of proteins contains a C-terminal thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases (pfam01855) as well as an N-terminal domain similar to the gamma subunit of the same group of oxidoreductases (pfam01558). The genes represented by this model are always found in association with a neighboring gene for a beta subunit (TIGR02177) which also occurs in a 4-subunit (alpha/beta/gamma/ferredoxin) version of the system. This alpha/gamma plus beta structure was used to define the set of sequences to include in this model. This pair of genes is not consistantly observed in proximity to any electron acceptor genes, but is found next to putative ferredoxins or ferredoxin-domain proteins in Azoarcus sp. EbN1, Bradyrhizobium japonicum USDA 110, Frankia sp. CcI3, Rhodoferax ferrireducens DSM 15236, Rhodopseudomonas palustris BisB5, Os, Sphingomonas wittichii RW1 and Streptomyces clavuligerus. Other potential acceptors are also sporadically observed in close proximity including ferritin-like proteins, reberythrin, peroxiredoxin and a variety of other flavin and iron-sulfur cluster-containing proteins. The phylogenetic distribution of this family encompasses archaea, a number of deeply-branching bacterial clades and only a small number of firmicutes and proteobacteria. The enzyme from Sulfolobus has been characterized with respect to its substrate specificity, which is described as wide, encompassing various 2-oxoacids such as 2-oxoglutarate, 2-oxobutyrate and pyruvate. The enzyme from Hydrogenobacter thermophilus has been shown to have a high specificity towards 2-oxoglutarate and is one of the key enzymes in the reverse TCA cycle in this organism. Furthermore, considering its binding of coenzyme A, it can be reasonably inferred that the product of the reaction is succinyl-CoA. The genes for this enzyme in Prevotella intermedia 17, Persephonella marina EX-H1 and Picrophilus torridus DSM 9790 are in close proximity to a variety of TCA cycle genes. Persephonella marina and P. torridus are believed to encode complete TCA cycles, and none of these contains the lipoate-based 2-oxoglutarate dehydrogenase (E1/E2/E3) system. That system is presumed to be replaced by this one. In fact, the lipoate system is absent in most organisms possessing a member of this family, providing additional circumstantial evidence that many of these enzymes are capable of acting as 2-oxoglutarate dehydrogenases and.	0
NC_009523.1|WP_011956285.1|1885119_1886406_-|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|380561	cd06338, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in transport of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in transport of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT); however, their ligand specificity has not been determined experimentally.	4.61232e-106
NC_009523.1|WP_011956293.1|1898971_1900018_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl|CDD|235604	PRK05778, PRK05778, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated.	3.73021e-149
NC_009523.1|WP_011956281.1|1880642_1881347_-|ABC-transporter-ATP-binding-protein	gnl|CDD|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	4.01748e-122
NC_009523.1|WP_011956296.1|1902940_1903720_+|enoyl-ACP-reductase	gnl|CDD|223696	COG0623, FabI, Enoyl-[acyl-carrier-protein].	4.38039e-151
NC_009523.1|WP_011956289.1|1892317_1893868_+|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl|CDD|179543	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional.	0
NC_009523.1|WP_157041274.1|1887628_1889500_-|glycosyl-hydrolase	gnl|CDD|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	3.44226e-08
NC_009523.1|WP_083763273.1|1883224_1883827_-|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	4.38225e-39
NC_009523.1|WP_011956282.1|1881333_1882062_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213186	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system. The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).	1.16588e-110
NC_009523.1|WP_157041007.1|1890088_1891984_-|glycosyl-hydrolase	gnl|CDD|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	3.58329e-09
NC_009523.1|WP_011956280.1|1879692_1880625_-|3-keto-5-aminohexanoate-cleavage-protein	gnl|CDD|377562	pfam05853, BKACE, beta-keto acid cleavage enzyme. BKACE, beta-keto acid cleavage enzyme plays, a role in lysine degradation. In certain instances it catalyzes the conversion of 3-keto-5-aminohexanoate and acetyl-CoA into acetoacetate and 3-aminobutyryl-CoA. The family is found to have at least 14 slightly different potential new enzymatic activities, all of which can therefore be designated as beta-keto acid cleavage enzymes.	6.11834e-132
NC_009523.1|WP_011956284.1|1884243_1885113_-|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	6.21797e-60
NC_009523.1|WP_157041006.1|1886433_1887123_-|FCD-domain-containing-protein	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	6.09794e-30
NC_009523.1|WP_011956295.1|1901384_1902464_-|hypothetical-protein	gnl|CDD|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	2.4415e-11
NC_009523.1|WP_011956290.1|1894196_1895738_+|carboxypeptidase-M32	gnl|CDD|341054	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP. Peptidase family M32 is a subclass of metallocarboxypeptidases, distributed mainly in bacteria and archaea, whose members contain a HEXXH motif that participates in coordinating a divalent cation such as Zn2+ or Co2+. It includes the thermostable carboxypeptidases (E.C. 3.4.17.19) from Thermus aquaticus (TaqCP) and Pyrococcus furiosus (PfuCP), which have broad specificities toward a wide range of C-terminal substrates that include basic, aromatic, neutral and polar amino acids. These enzymes have a similar fold to the M3 peptidases such as neurolysin and the M2 angiotensin converting enzyme (ACE). The keratin-degrading extremophilic eubacterium Fervidobacterium islandicum M32 carboxypeptidase (FisCP) plays an important role in cellular metabolism, and significantly enhances the degradation of native chicken feathers. It has been shown to mainly cleave the C-termini of peptides with a basic amino acid sequence. Novel M32 peptidases from some eukaryotes: protozoa Trypanosoma cruzi, a causative agent of Chagas' disease, and Leishmania major, a parasite that causes leishmaniasis, have been identified, thus making these enzymes an attractive potential target for drug development against these organisms.	0
NC_009523.1|WP_011956294.1|1900770_1901382_+|ATP-dependent-Clp-protease-proteolytic-subunit	gnl|CDD|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	1.30851e-106
NC_009523.1|WP_011956291.1|1895792_1896509_+|hypothetical-protein	gnl|CDD|226755	COG4305, COG4305, Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism].	2.4123e-51
NC_009523.1|WP_049767484.1|1883830_1884229_-|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	6.5445e-23
NC_009523.1|WP_011956283.1|1882082_1882844_-|cyclase-family-protein	gnl|CDD|377240	pfam04199, Cyclase, Putative cyclase. Proteins in this family are thought to be cyclase enzymes. They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form part of the active site.	6.37901e-40

Protein sequences

>NC_009523.1|WP_157041274.1|1887628_1889500_-|glycosyl-hydrolase
MRPAEEENPWEFLGPANDDVTSLVFDPTTPTTLYAATWFRGVYKSEDGGTTWRYLRGSGFRGRSLAIASTTPTTLYVYGERGVYKSADGGETWRAVNRGLELGEWNWVSALSIDPTNPRVVFAGTRNGVYKSENGGDTWRKVAGSVTEINALSIDPTNPRVVFAETGTGVYKSDDGGETWGRISTWRANALSIDPANPQVIVAAVSDGVYKSADGGETWHAADGLPGMSVLSLLRAPTGVMYATNARSLYRSADGGATWSEIEVATPVFRSGTLREEVSFGGVSLRLLAVDPTAPATLYAKRTLSLFSGGLWRSSDGGVSWQPAGLGSIILSLAQTPSALYVGTYVGGVYRSDDRGLTWRAASDGLTGFDIFALAVDPTTPTTLYAATDNGVHKSDDSGLTWRAVGLPGQLVQALSVIPTTPTTLYAGVGYGDEPGVYKSTDGGETWRAIGLPGQRILTLAVDPTTPTTLYAGVREGGVQRSDDGGETWRAVGLPGRSVQALAIHPVEPATLYAGTDDRGENALFRSADGGATWSESVRTDSGITAVVIDPNAPATVYAASEMLLRSTDGGATWSREKGSSLFRSPSFLLLVTDPAQPPAIYGASISGVWRLAIEKARWAPYP
>NC_009523.1|WP_157041006.1|1886433_1887123_-|FCD-domain-containing-protein
MHTSEQGQSANRHAVRDRNRARRYSEWTVSYELTARSAGNRRRTRRQHHPRARVPAATQGLVQISPRRGVFVIELSIDEFREIYSIREVLEELAIQQALPHMTPAHLDYVSQINARFIQAIQDRAFATALEINQEFHLALYEPAQQPLLIDLISSLSTRSMRYRQIYVNLPNRAQQAIVDHETILAACRNWDVVAAGQAVRSHLRRTLEGVLATLKVSPESDHHPSDCS
>NC_009523.1|WP_011956285.1|1885119_1886406_-|amino-acid-ABC-transporter-substrate-binding-protein
MTHHTFRRQMLWAMLGAWIVALAVGACGQAPAAPAPTTAPAAPTTAPAAPTTAPAAPQGAPIKIGCSLPLTGAFADTGVWVQRGYEQWAEDVNAAGGLLGRPVELTIYDDESKTENAVNLLNRVISVDQADLLCGGYPGTAAAAQMAVAEKNQKVYVSMGGHMASFSQGFTYVFGAPPLMGQWWYEGLYGWLASLPEAERPKKAAVFTINNPVGAAILEPMPEKLSALGIEIVVNERYDVPLTDAAPLVTKAKGAEADIFFANGFFPDSVQIVKAMRALDYNPKLIAQGVGSIIPAWVQELGADGYYVFSGTAVHPSLPFEGISRLNEVARAKYNAPVAPIYFIFGYAWMQALQRGVEGAQTLDQTAIRDWLKANQITTVAGTFTFDERGLPPPYNYLTQVIDGKVELIWPPDVRTKEPIYPKPAWGQ
>NC_009523.1|WP_011956284.1|1884243_1885113_-|branched-chain-amino-acid-ABC-transporter-permease
MLYELAQSLTGGLLIGGALAVLSVGFSMAWGITHVLNVAHCAFAVLAAYLGYWALNRWGIDPLLALPVMLPTFFLLGVAMHTLLIRATARRAHDLGLATMVLTFGLGIVIENGMLLAWTPDPRVLKTAYSALTLRVGPVIVQAPHLIAFGLAVVTIGALYLFAERTFMGKAVRAVWQQPMGAALSGIDLDRVTTIAYGMAVATAAVGGVAMSLLYTFDPATHLSWLVYVFLVVILGGVGSILGSALAGLIIGLIIGISSVFIPLAWNNLVLFGLLIVLLLLRPQGLLQR
>NC_009523.1|WP_049767484.1|1883830_1884229_-|branched-chain-amino-acid-ABC-transporter-permease
MRRGALRSFGLPAPDALIGIGVALALAAVPLAGPGIYLLGFLFTIFMYGALAGSWNIIGGYAGYLSFGHAAFFGLGAYTTALLLFYFGWSPFLTLPIAGVLAALFAALVGYPCLRLRGPYFSLVTLILGLAM
>NC_009523.1|WP_083763273.1|1883224_1883827_-|branched-chain-amino-acid-ABC-transporter-permease
MTLNLPFTQGSSGLFLPFLRVDIYTSHVIFYEVMLGLLIIVTAVLRQITRTKMGVGLTAIREDEDAAGTLGVDATRLKLQAFMLSAFLTGLIGGVYSYYKSYLDPSFVFATSISITIVLMALFGGRLAWYGPLVGAVVISIVNEMLTTHAPPQTARIVFGVLLIGVIMFLPDGLMSIAQRHLPTLAVRRARHPATRDEVA
>NC_009523.1|WP_011956283.1|1882082_1882844_-|cyclase-family-protein
MKIFDLSVPTEMSPSEVEPVQVEHIDHKQTAAFMASFFGATVDDLPEGNGWANDQVTIRAHAGTHVDAPWHYYPTCGGARARTIDEMPLEWFYGDGVVLDMRHKPRGSLIDIDDLRTALDAIGYTLKPGDIVLIQTGADKLWGQAEYFAAGAGMSAAATRWLIEQGIRTMGIDAWGWDQPFWAMKERFQQTGDPSVIWEAHRVGRDLEYCHIEKLANLDALPRPFGFKVACFPVKLTGGSAGWTRVVAIFDDL
>NC_009523.1|WP_011956282.1|1881333_1882062_-|ABC-transporter-ATP-binding-protein
MLRGVGITKRFGGVTALRNVSFEVGAGELVGLIGPNGSGKSTLFSVISGFHPPDEGAVFFDGRDITGARPHTVAQMGIARTFQIVRPFTGMTVVENVRVGALYGRGERSIAVADRRARELVEFVGLEQRADTLARNLTLAEKKRLEIARALSIQPRVLLLDEVFAGLNPTEVRGAIDLIARIRSQFGVTIIMVEHVLKALMETCERIIVLSYGEKIAEGAPSAIAADPHVISVYLGKTYAAR
>NC_009523.1|WP_011956281.1|1880642_1881347_-|ABC-transporter-ATP-binding-protein
MLHVEHLNVAYDTLQVLWDVSLEVREGEIVALIGSNGAGKTTLLKTISGLMKPLSGAIRFMGEMITGLPPHDICRRGVIHVPEGRALFPRMRVIENLELGAYLPAARAQRHHALERVYRLFPRLKERWRQDAGTLSGGEQQMVAIGRALMAQPKLLMLDEPSLGLAPVLVEAMMEVLTHLNAEGMTILLVSQEVHQALDIAHRAYVMENGRIVRSGSADELRADDAIRSAYLGL
>NC_009523.1|WP_011956280.1|1879692_1880625_-|3-keto-5-aminohexanoate-cleavage-protein
MNKVIITAALTGAVTVPTQTPYLPYTIEQLAEDAEQCARAGAAIIHIHARNPANGAPSSDMELFGEILKAIKARTDAVICTTTGGGVGMTPADRVRVVPMWQPELATCNMGSMNFSVHPAARRFADSDYKFPWEKQWLLGSEDFIFPNTFASIKHFLGEMKKTNTRPEFEIYDVGHLYNLDFMVREGLVEKPIWLQFVMGVLGGIRATLYDLTHLLDTANRLFGSENYHWSVIGVGYPQQFHMCTAAIMLGGHARVGLEDNIFVSRGKLGRNHELVEKIVRIAAEFDREPATPAEVRAFLNLKGKDLVGF
>NC_009523.1|WP_157041007.1|1890088_1891984_-|glycosyl-hydrolase
MLRPAEEENPWEFLGPADDDVTSLVFDPTTPTTLYAATRFRGVYKSEDGGTTWRYLRGSGFRGRSLAIASTTPTTLYVYGERGVYKSADGGETWRAVNRGLELGEWNWVSALSIDPTNPRVVFAGTDTGVYKSENGGESWRKAEGYFPEINALSIDPTNSQVIVAGTRNGVYKSTDGGETWDRISTWRANALSIDPANPQVIVARTDKGVIRSADGGATWRAADGLPAKKMSSLLRAPTGVMYVSDWEDCSHLYRSTDGGATWNRVDIIEILLASPLDRCPGGAGSKLLLLAVDPNAPATLYASVSFSGLSGLLRSSDGGVSWRPAGLPRTVRSLALTPSSLYAGTSGGGVYRSDDRGLTWRAASEGLTGFDVFELAVDPTTPTTLYAATDNGVHKSDDSGLTWRAVGLSGQRVWTLAVIPTTPTTLYAGVGYGDEPGVYKSTDGGETWRAAGLPGQRVLTLAVDPTTPTTLYAGVREGGVQRSDDGGATWRAVGLPGRSVRALAIHPVEPATLYAGTDDRGQDALFRSADGGATWSESIRTTGIIAVVIDPNAPATVYAANENGEILRSTDGGATWSYYPIWSHYPILTATPLSLLLVTDPAQPPTIYVGTLISGVQRLAIDKARWAPYP
>NC_009523.1|WP_011956289.1|1892317_1893868_+|L-glutamate-gamma-semialdehyde-dehydrogenase
MDLPPFRNEPYTDFNDPANIAAMEQALAHVRAQFGRTYPLIIDGERIATSETIASVNPARPAEVVGYAASADVALAQRAIETAHRRFAEWRRAPVEQRVDLLLKAAAAMRARRFELNAWIVYEVSKSWSEADADVAEAIDFCEFYAREMLRLSEPQPLYPIPGEDDRLTYIPLGAGVAIPPWNFPLAIMVGLVTAPVVAGNTIVLKPASTAPIIAAKFMEILEECGLPPGVVNYLPGPGSSVGDALVDHPLTRFIGFTGSKEVGLRIFERAAKVHPGQKWLKRTILEMGGKDTIIVDETADLEAAASGIVVSAFGFQGQKCSACSRVVAVEPVYNELLDRVIELTGGLTVGDPAQRGTFMGAVIDARSQEKIRRYIEEGQREGGRLAFSGDAPADGYFVPPTIIADVDPNARIAQEEIFGPVLAFIKARDFDEALAIANNTEYGLTGGVYSRSRERLERARDEFHVGNLYFNRKITGAMVGAHPFGGFNMSGTDSKAGGRDYLLLFLQAKTVAEKL
>NC_009523.1|WP_011956290.1|1894196_1895738_+|carboxypeptidase-M32
MHIPPQLTELKTRLHEIYDLEMAAALLNWDQTTYMPPGGATARGRQLATLGRIAHEKRTDAQIGRLLDALRPYEESLPPDSPDAALIRVARRDYERATRIPAAFTAELYQHMAVSYDVWSRARPANDIAAVLPYLERTLDLSRRFAEFFPGYDHIADPLIDMADYGMRTATIKQVFAGLRQGLLPLVEQVTAQPPVDDSCLRQFFPEAQQLAFGVEVITALGYDFTRGRQDKTLHPFMTKFSLNDVRITTRFDEYDLGSALFSTIHEAGHAMYEQGIALEFEGTPLASGTSAGMHESQSRLWENIVGRSLPFWEHFYPRLQATFPDQLGHVSLETFYRAINKVQRSLIRTEADEVTYNLHVILRFDLELALLEGTLAVRDLPEAWHERYRSDLGVTPPDDRDGVLQDVHWYGGLIGGAFQGYTLGNIMSAQLYEAALRDHPDIPQQIGRGEFGTLREWMREHVYRYGRALDADDILRRATGRSLDVQPYLAYLWRKYGEIYGIAYIPFHQVVA
>NC_009523.1|WP_011956291.1|1895792_1896509_+|hypothetical-protein
MPVRILVFACAWLLIVGGIPVVGAQNGAYTVYLPLVIRDATYRTGEGTYYNADGTGNCSFDPSPEDLMVAAMNHADYDNAALCGTFIEVIGPKGRVVVRIVDRCPECARGDVDMSPQAFARIADLSAGRVPIRWRIVSPALTGPIAYRFKEGSSQWWTAVQIRNHRNPVARFEYLRSDGQWQTVPRVMDNYFVASSGMGPGPYTFRVTDVYGNVLTDTGVPLIEGGVINGAAQFPPAP
>NC_009523.1|WP_011956292.1|1896766_1898617_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MTHVIETETQPRPLDHLESEPIVNDFSIVAATVNGSGSQTANNVLMRAIFKMGVPVSGKNLFPSNIQGLPTWFTIRVSKDGYTARRDTTEILVAFNQRTADEDLASLVPGGVCIHPNDVKFTNPRSDVFFYPLPVRELVRQSGADAKLRDYIANMVYVGAVAELLGIDMNEIKAAIERHFKGKPKPIALNYGVVVAAAEWVRANLSKVDRFRVEPMEKTQGLILVDGNTAAAFGALMGGMTVCAWYPITPSTSLVDAMTELAPILRADPATGTTTYAIIQTEDEIAAAGIIVGAGWAGARAMTATSGPGLSLMNEFVSLAYFAEVPCVIWDVQRMGPSTGLPTRTSQGDVLSAYYMGHGDTHHVVLFPGTMTECFEFGYLAFDLAERLQTPVLVLSDLDLGMNNWMSEPFTYPEKPFDRGKVLTADELEQFKDWGRYKDLDGDGIPYRTIPGNPNPRAAHLARGTGHNEYALYSERPTDWQQNLDRLTRKHNTARTLVPKPIVLEAKAADIGIIAYGSTDPAVREAGDMLRARGIQTSYLRIRALPLEATLTDFLARYERVYIVELNQDGQMAQLVQLHAPEYAARVRSVRICNGLPMTAQFVVDSIMRAEQAERE
>NC_009523.1|WP_011956293.1|1898971_1900018_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MTVETKTNGKPQVNRIGLTSQDYRGGETTLCQGCGHNSITSQIIAAAFELSLAPHQVIKMSGIGCSSKTPAYFMSRSFGFNTLHGRMPSVTTGAVLANRTLLAIGISGDGDTGSIGLGQFKHMVRRNVPVVYIVENNGVYGLTKGQFSATADVGQKLKYAGTNVLPPIDICIEALAADCGFVARSFAGDAKQVRELLKAAMSFHGTAVIDIISPCVTFNNHHDSTKSYDYGKAHEERLQDIQFIPRFDEVHVDYDEGDERYVQLHDGPMIKLRKLGRDYDPTNKWHAIELLEKARQNHEFITGLLYINTQRQTLHEVMHLTSTPLAYLPEEELRPSRERFERAMQEFV
>NC_009523.1|WP_041333317.1|1900175_1900451_-|hypothetical-protein
MTAHEPRPACRIGVTAEDLAREADRAVLYGAILAAQRPEVRIKPHLADAVADLLPAVRAYLEGEENELAAYALAYARACGAEAFLRAKRKV
>NC_009523.1|WP_011956294.1|1900770_1901382_+|ATP-dependent-Clp-protease-proteolytic-subunit
MPYVPVPTIVERTPRGERSWDLFSRLLQERIIMLGTPIDDEVASLIVAQLLYLQHTDPDRDIWFYINSPGGSVRDGLAIYDTMKLISPDVCTVCVGRAGSMATILLAGGARGKRYALPHATIHFHPAGGGAEGYAPDMERIVKELLRIQELGNSLLARDTGKTVEEITRDFSRDRFMTAEEAREYGFIDAILESKKVAALKTA
>NC_009523.1|WP_011956295.1|1901384_1902464_-|hypothetical-protein
MSSLFLRALLLALVIYEFLSDLRGWRGLSWGHPALRPVLAVAALALHPRNTSWRQRLPALALAAFPAFIVHTIIAGVRRRALDPMATLQPGVHRDRTVARVSIPMSEAFMPALYIVPRSGAHAAVAVLHGSGCDKTYFTWRLTNALLRQGMAALLVDLDGHGENPRLQRYPQMLECATEAARWLRARHARVGMLGISLGGCIAARAAADGMSIDALAIMEAPPRLTFDNRDRLAEARALAQPYVIDLLGEASILHLGRAVYRLARAQRTPGIRAAISTWDLIAACDLCGSLARLTTPLLLVYGERDAIVKPAQAEEAWRAAPSGATMLLVPDASHLTLILHPEALQRMAAWMADRLNAL
>NC_009523.1|WP_011956296.1|1902940_1903720_+|enoyl-ACP-reductase
MGLLQGKKGLVMGVANDHSIAWGIAKALHTQGADLGFTYVGEALERRVRPLAESLGARLIEPCDVQRDEDIDALMARVRDVYGSLDIIIHAIAFALRDELNGPYLKTTREGFRLALDVSAYSLTGVVKAAQDLLVPGASIVTLTYHGSQQVAQNYNVMGVAKAALEASVRYLANDLGPRGIRVNAISAGPIRTLAASGIAGFRTLHKQFAEVAPLRRNVTIEDVGNAAVWLCSDWSSAVTGEIVYVDAGFHTISISLPE

Crispr_ID: NC_009523_36

• CRISPR_ID: NC_009523_36
• CRISPR_location: 1891959-1892065
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_36

Consensus_repeat	Method
TTCTCTTCCTCCGCCGGGCGCAACAGGGCGAACCCC	CRISPRCasFinder

spacers of NC_009523_36

>36.1|1891995|35|NC_009523|CRISPRCasFinder
CTTTTGGATAGGCGCGGGCGCGCGGTGCTGGCGGG

CRISPR arrays and Neighbor proteins around NC_009523_36

CRISPR arrays

The CRISPR arrays of NC_009523_36

>merge|NC_009523|36|1891959-1892065|CRISPRCasFinder
TTCTCTTCCTCCGCCGGGCGCAACAGGGCGAACCCCCTTTTGGATAGGCGCGGGCGCGCGGTGCTGGCGGGTTCTCTTCCTCCGCCGGGCGCAACAGGGCGAACCCC

>NC_009523|36|33|1891959-1892065|CRISPRCasFinder
TTCTCTTCCTCCGCCGGGCGCAACAGGGCGAACCCC	CTTTTGGATAGGCGCGGGCGCGCGGTGCTGGCGGG
TTCTCTTCCTCCGCCGGGCGCAACAGGGCGAACCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956292.1|1896766_1898617_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl|CDD|274738
NC_009523.1|WP_011956285.1|1885119_1886406_-|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380561
NC_009523.1|WP_011956293.1|1898971_1900018_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl|CDD|235604
NC_009523.1|WP_011956281.1|1880642_1881347_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223487
NC_009523.1|WP_011956296.1|1902940_1903720_+|enoyl-ACP-reductase	unknown	unknown	gnl|CDD|223696
NC_009523.1|WP_011956289.1|1892317_1893868_+|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|179543
NC_009523.1|WP_157041274.1|1887628_1889500_-|glycosyl-hydrolase	unknown	unknown	gnl|CDD|271234
NC_009523.1|WP_083763273.1|1883224_1883827_-|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119323
NC_009523.1|WP_011956282.1|1881333_1882062_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213186
NC_009523.1|WP_041333317.1|1900175_1900451_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956280.1|1879692_1880625_-|3-keto-5-aminohexanoate-cleavage-protein	unknown	unknown	gnl|CDD|377562
NC_009523.1|WP_011956284.1|1884243_1885113_-|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119324
NC_009523.1|WP_157041006.1|1886433_1887123_-|FCD-domain-containing-protein	unknown	unknown	gnl|CDD|224715
NC_009523.1|WP_011956297.1|1903703_1904927_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|223701
NC_009523.1|WP_011956295.1|1901384_1902464_-|hypothetical-protein	unknown	unknown	gnl|CDD|184875
NC_009523.1|WP_011956290.1|1894196_1895738_+|carboxypeptidase-M32	unknown	unknown	gnl|CDD|341054
NC_009523.1|WP_011956294.1|1900770_1901382_+|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl|CDD|178955
NC_009523.1|WP_011956291.1|1895792_1896509_+|hypothetical-protein	unknown	unknown	gnl|CDD|226755
NC_009523.1|WP_049767484.1|1883830_1884229_-|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119323
NC_009523.1|WP_011956283.1|1882082_1882844_-|cyclase-family-protein	unknown	unknown	gnl|CDD|377240

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956292.1|1896766_1898617_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl|CDD|274738	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit. This family of proteins contains a C-terminal thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases (pfam01855) as well as an N-terminal domain similar to the gamma subunit of the same group of oxidoreductases (pfam01558). The genes represented by this model are always found in association with a neighboring gene for a beta subunit (TIGR02177) which also occurs in a 4-subunit (alpha/beta/gamma/ferredoxin) version of the system. This alpha/gamma plus beta structure was used to define the set of sequences to include in this model. This pair of genes is not consistantly observed in proximity to any electron acceptor genes, but is found next to putative ferredoxins or ferredoxin-domain proteins in Azoarcus sp. EbN1, Bradyrhizobium japonicum USDA 110, Frankia sp. CcI3, Rhodoferax ferrireducens DSM 15236, Rhodopseudomonas palustris BisB5, Os, Sphingomonas wittichii RW1 and Streptomyces clavuligerus. Other potential acceptors are also sporadically observed in close proximity including ferritin-like proteins, reberythrin, peroxiredoxin and a variety of other flavin and iron-sulfur cluster-containing proteins. The phylogenetic distribution of this family encompasses archaea, a number of deeply-branching bacterial clades and only a small number of firmicutes and proteobacteria. The enzyme from Sulfolobus has been characterized with respect to its substrate specificity, which is described as wide, encompassing various 2-oxoacids such as 2-oxoglutarate, 2-oxobutyrate and pyruvate. The enzyme from Hydrogenobacter thermophilus has been shown to have a high specificity towards 2-oxoglutarate and is one of the key enzymes in the reverse TCA cycle in this organism. Furthermore, considering its binding of coenzyme A, it can be reasonably inferred that the product of the reaction is succinyl-CoA. The genes for this enzyme in Prevotella intermedia 17, Persephonella marina EX-H1 and Picrophilus torridus DSM 9790 are in close proximity to a variety of TCA cycle genes. Persephonella marina and P. torridus are believed to encode complete TCA cycles, and none of these contains the lipoate-based 2-oxoglutarate dehydrogenase (E1/E2/E3) system. That system is presumed to be replaced by this one. In fact, the lipoate system is absent in most organisms possessing a member of this family, providing additional circumstantial evidence that many of these enzymes are capable of acting as 2-oxoglutarate dehydrogenases and.	0
NC_009523.1|WP_011956285.1|1885119_1886406_-|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|380561	cd06338, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in transport of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in transport of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT); however, their ligand specificity has not been determined experimentally.	4.61232e-106
NC_009523.1|WP_011956293.1|1898971_1900018_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl|CDD|235604	PRK05778, PRK05778, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated.	3.73021e-149
NC_009523.1|WP_011956281.1|1880642_1881347_-|ABC-transporter-ATP-binding-protein	gnl|CDD|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	4.01748e-122
NC_009523.1|WP_011956296.1|1902940_1903720_+|enoyl-ACP-reductase	gnl|CDD|223696	COG0623, FabI, Enoyl-[acyl-carrier-protein].	4.38039e-151
NC_009523.1|WP_011956289.1|1892317_1893868_+|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl|CDD|179543	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional.	0
NC_009523.1|WP_157041274.1|1887628_1889500_-|glycosyl-hydrolase	gnl|CDD|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	3.44226e-08
NC_009523.1|WP_083763273.1|1883224_1883827_-|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	4.38225e-39
NC_009523.1|WP_011956282.1|1881333_1882062_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213186	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system. The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).	1.16588e-110
NC_009523.1|WP_011956280.1|1879692_1880625_-|3-keto-5-aminohexanoate-cleavage-protein	gnl|CDD|377562	pfam05853, BKACE, beta-keto acid cleavage enzyme. BKACE, beta-keto acid cleavage enzyme plays, a role in lysine degradation. In certain instances it catalyzes the conversion of 3-keto-5-aminohexanoate and acetyl-CoA into acetoacetate and 3-aminobutyryl-CoA. The family is found to have at least 14 slightly different potential new enzymatic activities, all of which can therefore be designated as beta-keto acid cleavage enzymes.	6.11834e-132
NC_009523.1|WP_011956284.1|1884243_1885113_-|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	6.21797e-60
NC_009523.1|WP_157041006.1|1886433_1887123_-|FCD-domain-containing-protein	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	6.09794e-30
NC_009523.1|WP_011956297.1|1903703_1904927_-|AI-2E-family-transporter	gnl|CDD|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.07853e-46
NC_009523.1|WP_011956295.1|1901384_1902464_-|hypothetical-protein	gnl|CDD|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	2.4415e-11
NC_009523.1|WP_011956290.1|1894196_1895738_+|carboxypeptidase-M32	gnl|CDD|341054	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP. Peptidase family M32 is a subclass of metallocarboxypeptidases, distributed mainly in bacteria and archaea, whose members contain a HEXXH motif that participates in coordinating a divalent cation such as Zn2+ or Co2+. It includes the thermostable carboxypeptidases (E.C. 3.4.17.19) from Thermus aquaticus (TaqCP) and Pyrococcus furiosus (PfuCP), which have broad specificities toward a wide range of C-terminal substrates that include basic, aromatic, neutral and polar amino acids. These enzymes have a similar fold to the M3 peptidases such as neurolysin and the M2 angiotensin converting enzyme (ACE). The keratin-degrading extremophilic eubacterium Fervidobacterium islandicum M32 carboxypeptidase (FisCP) plays an important role in cellular metabolism, and significantly enhances the degradation of native chicken feathers. It has been shown to mainly cleave the C-termini of peptides with a basic amino acid sequence. Novel M32 peptidases from some eukaryotes: protozoa Trypanosoma cruzi, a causative agent of Chagas' disease, and Leishmania major, a parasite that causes leishmaniasis, have been identified, thus making these enzymes an attractive potential target for drug development against these organisms.	0
NC_009523.1|WP_011956294.1|1900770_1901382_+|ATP-dependent-Clp-protease-proteolytic-subunit	gnl|CDD|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	1.30851e-106
NC_009523.1|WP_011956291.1|1895792_1896509_+|hypothetical-protein	gnl|CDD|226755	COG4305, COG4305, Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism].	2.4123e-51
NC_009523.1|WP_049767484.1|1883830_1884229_-|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	6.5445e-23
NC_009523.1|WP_011956283.1|1882082_1882844_-|cyclase-family-protein	gnl|CDD|377240	pfam04199, Cyclase, Putative cyclase. Proteins in this family are thought to be cyclase enzymes. They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form part of the active site.	6.37901e-40

Protein sequences

>NC_009523.1|WP_157041274.1|1887628_1889500_-|glycosyl-hydrolase
MRPAEEENPWEFLGPANDDVTSLVFDPTTPTTLYAATWFRGVYKSEDGGTTWRYLRGSGFRGRSLAIASTTPTTLYVYGERGVYKSADGGETWRAVNRGLELGEWNWVSALSIDPTNPRVVFAGTRNGVYKSENGGDTWRKVAGSVTEINALSIDPTNPRVVFAETGTGVYKSDDGGETWGRISTWRANALSIDPANPQVIVAAVSDGVYKSADGGETWHAADGLPGMSVLSLLRAPTGVMYATNARSLYRSADGGATWSEIEVATPVFRSGTLREEVSFGGVSLRLLAVDPTAPATLYAKRTLSLFSGGLWRSSDGGVSWQPAGLGSIILSLAQTPSALYVGTYVGGVYRSDDRGLTWRAASDGLTGFDIFALAVDPTTPTTLYAATDNGVHKSDDSGLTWRAVGLPGQLVQALSVIPTTPTTLYAGVGYGDEPGVYKSTDGGETWRAIGLPGQRILTLAVDPTTPTTLYAGVREGGVQRSDDGGETWRAVGLPGRSVQALAIHPVEPATLYAGTDDRGENALFRSADGGATWSESVRTDSGITAVVIDPNAPATVYAASEMLLRSTDGGATWSREKGSSLFRSPSFLLLVTDPAQPPAIYGASISGVWRLAIEKARWAPYP
>NC_009523.1|WP_157041006.1|1886433_1887123_-|FCD-domain-containing-protein
MHTSEQGQSANRHAVRDRNRARRYSEWTVSYELTARSAGNRRRTRRQHHPRARVPAATQGLVQISPRRGVFVIELSIDEFREIYSIREVLEELAIQQALPHMTPAHLDYVSQINARFIQAIQDRAFATALEINQEFHLALYEPAQQPLLIDLISSLSTRSMRYRQIYVNLPNRAQQAIVDHETILAACRNWDVVAAGQAVRSHLRRTLEGVLATLKVSPESDHHPSDCS
>NC_009523.1|WP_011956285.1|1885119_1886406_-|amino-acid-ABC-transporter-substrate-binding-protein
MTHHTFRRQMLWAMLGAWIVALAVGACGQAPAAPAPTTAPAAPTTAPAAPTTAPAAPQGAPIKIGCSLPLTGAFADTGVWVQRGYEQWAEDVNAAGGLLGRPVELTIYDDESKTENAVNLLNRVISVDQADLLCGGYPGTAAAAQMAVAEKNQKVYVSMGGHMASFSQGFTYVFGAPPLMGQWWYEGLYGWLASLPEAERPKKAAVFTINNPVGAAILEPMPEKLSALGIEIVVNERYDVPLTDAAPLVTKAKGAEADIFFANGFFPDSVQIVKAMRALDYNPKLIAQGVGSIIPAWVQELGADGYYVFSGTAVHPSLPFEGISRLNEVARAKYNAPVAPIYFIFGYAWMQALQRGVEGAQTLDQTAIRDWLKANQITTVAGTFTFDERGLPPPYNYLTQVIDGKVELIWPPDVRTKEPIYPKPAWGQ
>NC_009523.1|WP_011956284.1|1884243_1885113_-|branched-chain-amino-acid-ABC-transporter-permease
MLYELAQSLTGGLLIGGALAVLSVGFSMAWGITHVLNVAHCAFAVLAAYLGYWALNRWGIDPLLALPVMLPTFFLLGVAMHTLLIRATARRAHDLGLATMVLTFGLGIVIENGMLLAWTPDPRVLKTAYSALTLRVGPVIVQAPHLIAFGLAVVTIGALYLFAERTFMGKAVRAVWQQPMGAALSGIDLDRVTTIAYGMAVATAAVGGVAMSLLYTFDPATHLSWLVYVFLVVILGGVGSILGSALAGLIIGLIIGISSVFIPLAWNNLVLFGLLIVLLLLRPQGLLQR
>NC_009523.1|WP_049767484.1|1883830_1884229_-|branched-chain-amino-acid-ABC-transporter-permease
MRRGALRSFGLPAPDALIGIGVALALAAVPLAGPGIYLLGFLFTIFMYGALAGSWNIIGGYAGYLSFGHAAFFGLGAYTTALLLFYFGWSPFLTLPIAGVLAALFAALVGYPCLRLRGPYFSLVTLILGLAM
>NC_009523.1|WP_083763273.1|1883224_1883827_-|branched-chain-amino-acid-ABC-transporter-permease
MTLNLPFTQGSSGLFLPFLRVDIYTSHVIFYEVMLGLLIIVTAVLRQITRTKMGVGLTAIREDEDAAGTLGVDATRLKLQAFMLSAFLTGLIGGVYSYYKSYLDPSFVFATSISITIVLMALFGGRLAWYGPLVGAVVISIVNEMLTTHAPPQTARIVFGVLLIGVIMFLPDGLMSIAQRHLPTLAVRRARHPATRDEVA
>NC_009523.1|WP_011956283.1|1882082_1882844_-|cyclase-family-protein
MKIFDLSVPTEMSPSEVEPVQVEHIDHKQTAAFMASFFGATVDDLPEGNGWANDQVTIRAHAGTHVDAPWHYYPTCGGARARTIDEMPLEWFYGDGVVLDMRHKPRGSLIDIDDLRTALDAIGYTLKPGDIVLIQTGADKLWGQAEYFAAGAGMSAAATRWLIEQGIRTMGIDAWGWDQPFWAMKERFQQTGDPSVIWEAHRVGRDLEYCHIEKLANLDALPRPFGFKVACFPVKLTGGSAGWTRVVAIFDDL
>NC_009523.1|WP_011956282.1|1881333_1882062_-|ABC-transporter-ATP-binding-protein
MLRGVGITKRFGGVTALRNVSFEVGAGELVGLIGPNGSGKSTLFSVISGFHPPDEGAVFFDGRDITGARPHTVAQMGIARTFQIVRPFTGMTVVENVRVGALYGRGERSIAVADRRARELVEFVGLEQRADTLARNLTLAEKKRLEIARALSIQPRVLLLDEVFAGLNPTEVRGAIDLIARIRSQFGVTIIMVEHVLKALMETCERIIVLSYGEKIAEGAPSAIAADPHVISVYLGKTYAAR
>NC_009523.1|WP_011956281.1|1880642_1881347_-|ABC-transporter-ATP-binding-protein
MLHVEHLNVAYDTLQVLWDVSLEVREGEIVALIGSNGAGKTTLLKTISGLMKPLSGAIRFMGEMITGLPPHDICRRGVIHVPEGRALFPRMRVIENLELGAYLPAARAQRHHALERVYRLFPRLKERWRQDAGTLSGGEQQMVAIGRALMAQPKLLMLDEPSLGLAPVLVEAMMEVLTHLNAEGMTILLVSQEVHQALDIAHRAYVMENGRIVRSGSADELRADDAIRSAYLGL
>NC_009523.1|WP_011956280.1|1879692_1880625_-|3-keto-5-aminohexanoate-cleavage-protein
MNKVIITAALTGAVTVPTQTPYLPYTIEQLAEDAEQCARAGAAIIHIHARNPANGAPSSDMELFGEILKAIKARTDAVICTTTGGGVGMTPADRVRVVPMWQPELATCNMGSMNFSVHPAARRFADSDYKFPWEKQWLLGSEDFIFPNTFASIKHFLGEMKKTNTRPEFEIYDVGHLYNLDFMVREGLVEKPIWLQFVMGVLGGIRATLYDLTHLLDTANRLFGSENYHWSVIGVGYPQQFHMCTAAIMLGGHARVGLEDNIFVSRGKLGRNHELVEKIVRIAAEFDREPATPAEVRAFLNLKGKDLVGF
>NC_009523.1|WP_011956289.1|1892317_1893868_+|L-glutamate-gamma-semialdehyde-dehydrogenase
MDLPPFRNEPYTDFNDPANIAAMEQALAHVRAQFGRTYPLIIDGERIATSETIASVNPARPAEVVGYAASADVALAQRAIETAHRRFAEWRRAPVEQRVDLLLKAAAAMRARRFELNAWIVYEVSKSWSEADADVAEAIDFCEFYAREMLRLSEPQPLYPIPGEDDRLTYIPLGAGVAIPPWNFPLAIMVGLVTAPVVAGNTIVLKPASTAPIIAAKFMEILEECGLPPGVVNYLPGPGSSVGDALVDHPLTRFIGFTGSKEVGLRIFERAAKVHPGQKWLKRTILEMGGKDTIIVDETADLEAAASGIVVSAFGFQGQKCSACSRVVAVEPVYNELLDRVIELTGGLTVGDPAQRGTFMGAVIDARSQEKIRRYIEEGQREGGRLAFSGDAPADGYFVPPTIIADVDPNARIAQEEIFGPVLAFIKARDFDEALAIANNTEYGLTGGVYSRSRERLERARDEFHVGNLYFNRKITGAMVGAHPFGGFNMSGTDSKAGGRDYLLLFLQAKTVAEKL
>NC_009523.1|WP_011956290.1|1894196_1895738_+|carboxypeptidase-M32
MHIPPQLTELKTRLHEIYDLEMAAALLNWDQTTYMPPGGATARGRQLATLGRIAHEKRTDAQIGRLLDALRPYEESLPPDSPDAALIRVARRDYERATRIPAAFTAELYQHMAVSYDVWSRARPANDIAAVLPYLERTLDLSRRFAEFFPGYDHIADPLIDMADYGMRTATIKQVFAGLRQGLLPLVEQVTAQPPVDDSCLRQFFPEAQQLAFGVEVITALGYDFTRGRQDKTLHPFMTKFSLNDVRITTRFDEYDLGSALFSTIHEAGHAMYEQGIALEFEGTPLASGTSAGMHESQSRLWENIVGRSLPFWEHFYPRLQATFPDQLGHVSLETFYRAINKVQRSLIRTEADEVTYNLHVILRFDLELALLEGTLAVRDLPEAWHERYRSDLGVTPPDDRDGVLQDVHWYGGLIGGAFQGYTLGNIMSAQLYEAALRDHPDIPQQIGRGEFGTLREWMREHVYRYGRALDADDILRRATGRSLDVQPYLAYLWRKYGEIYGIAYIPFHQVVA
>NC_009523.1|WP_011956291.1|1895792_1896509_+|hypothetical-protein
MPVRILVFACAWLLIVGGIPVVGAQNGAYTVYLPLVIRDATYRTGEGTYYNADGTGNCSFDPSPEDLMVAAMNHADYDNAALCGTFIEVIGPKGRVVVRIVDRCPECARGDVDMSPQAFARIADLSAGRVPIRWRIVSPALTGPIAYRFKEGSSQWWTAVQIRNHRNPVARFEYLRSDGQWQTVPRVMDNYFVASSGMGPGPYTFRVTDVYGNVLTDTGVPLIEGGVINGAAQFPPAP
>NC_009523.1|WP_011956292.1|1896766_1898617_+|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MTHVIETETQPRPLDHLESEPIVNDFSIVAATVNGSGSQTANNVLMRAIFKMGVPVSGKNLFPSNIQGLPTWFTIRVSKDGYTARRDTTEILVAFNQRTADEDLASLVPGGVCIHPNDVKFTNPRSDVFFYPLPVRELVRQSGADAKLRDYIANMVYVGAVAELLGIDMNEIKAAIERHFKGKPKPIALNYGVVVAAAEWVRANLSKVDRFRVEPMEKTQGLILVDGNTAAAFGALMGGMTVCAWYPITPSTSLVDAMTELAPILRADPATGTTTYAIIQTEDEIAAAGIIVGAGWAGARAMTATSGPGLSLMNEFVSLAYFAEVPCVIWDVQRMGPSTGLPTRTSQGDVLSAYYMGHGDTHHVVLFPGTMTECFEFGYLAFDLAERLQTPVLVLSDLDLGMNNWMSEPFTYPEKPFDRGKVLTADELEQFKDWGRYKDLDGDGIPYRTIPGNPNPRAAHLARGTGHNEYALYSERPTDWQQNLDRLTRKHNTARTLVPKPIVLEAKAADIGIIAYGSTDPAVREAGDMLRARGIQTSYLRIRALPLEATLTDFLARYERVYIVELNQDGQMAQLVQLHAPEYAARVRSVRICNGLPMTAQFVVDSIMRAEQAERE
>NC_009523.1|WP_011956293.1|1898971_1900018_+|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MTVETKTNGKPQVNRIGLTSQDYRGGETTLCQGCGHNSITSQIIAAAFELSLAPHQVIKMSGIGCSSKTPAYFMSRSFGFNTLHGRMPSVTTGAVLANRTLLAIGISGDGDTGSIGLGQFKHMVRRNVPVVYIVENNGVYGLTKGQFSATADVGQKLKYAGTNVLPPIDICIEALAADCGFVARSFAGDAKQVRELLKAAMSFHGTAVIDIISPCVTFNNHHDSTKSYDYGKAHEERLQDIQFIPRFDEVHVDYDEGDERYVQLHDGPMIKLRKLGRDYDPTNKWHAIELLEKARQNHEFITGLLYINTQRQTLHEVMHLTSTPLAYLPEEELRPSRERFERAMQEFV
>NC_009523.1|WP_041333317.1|1900175_1900451_-|hypothetical-protein
MTAHEPRPACRIGVTAEDLAREADRAVLYGAILAAQRPEVRIKPHLADAVADLLPAVRAYLEGEENELAAYALAYARACGAEAFLRAKRKV
>NC_009523.1|WP_011956294.1|1900770_1901382_+|ATP-dependent-Clp-protease-proteolytic-subunit
MPYVPVPTIVERTPRGERSWDLFSRLLQERIIMLGTPIDDEVASLIVAQLLYLQHTDPDRDIWFYINSPGGSVRDGLAIYDTMKLISPDVCTVCVGRAGSMATILLAGGARGKRYALPHATIHFHPAGGGAEGYAPDMERIVKELLRIQELGNSLLARDTGKTVEEITRDFSRDRFMTAEEAREYGFIDAILESKKVAALKTA
>NC_009523.1|WP_011956295.1|1901384_1902464_-|hypothetical-protein
MSSLFLRALLLALVIYEFLSDLRGWRGLSWGHPALRPVLAVAALALHPRNTSWRQRLPALALAAFPAFIVHTIIAGVRRRALDPMATLQPGVHRDRTVARVSIPMSEAFMPALYIVPRSGAHAAVAVLHGSGCDKTYFTWRLTNALLRQGMAALLVDLDGHGENPRLQRYPQMLECATEAARWLRARHARVGMLGISLGGCIAARAAADGMSIDALAIMEAPPRLTFDNRDRLAEARALAQPYVIDLLGEASILHLGRAVYRLARAQRTPGIRAAISTWDLIAACDLCGSLARLTTPLLLVYGERDAIVKPAQAEEAWRAAPSGATMLLVPDASHLTLILHPEALQRMAAWMADRLNAL
>NC_009523.1|WP_011956296.1|1902940_1903720_+|enoyl-ACP-reductase
MGLLQGKKGLVMGVANDHSIAWGIAKALHTQGADLGFTYVGEALERRVRPLAESLGARLIEPCDVQRDEDIDALMARVRDVYGSLDIIIHAIAFALRDELNGPYLKTTREGFRLALDVSAYSLTGVVKAAQDLLVPGASIVTLTYHGSQQVAQNYNVMGVAKAALEASVRYLANDLGPRGIRVNAISAGPIRTLAASGIAGFRTLHKQFAEVAPLRRNVTIEDVGNAAVWLCSDWSSAVTGEIVYVDAGFHTISISLPE
>NC_009523.1|WP_011956297.1|1903703_1904927_-|AI-2E-family-transporter
MSVEARPIRFSPTIKLITVALLGALFFWLIRGLGNVLVPFVAAAITAYLFNPLITWLNRRTRIGRAIWIGVLYIVIGIIIYGLWRTLGPAIEREYSGLQAQIPHTLNLVQQELLLLKHVSIAGIDIEVAPVNEALREALADFGRRLPEHVPHLVAIAFETLLLFVTYLIVTFYLLLEAPRIVEWTYGLVPAPYRAEIRALGSQIDRILAGYVRGTLMLIPIMATLTTIALMILGVRYALVLGIVTGILETIPLIGPWSAAGIAIIVALFQAPAPWGWPAWLIAGAIGLTYFVLRMFEDNFIIPHVVGPAVHLHPMLVIFAILAGGALGGPFGLFVSIPVAAIARLLLRYLYYKLIDAPDPSIHAPSSHHYPVSTQVEGTSIDQPPALSDGRVTRTVDQADQAATPAN

Crispr_ID: NC_009523_37

• CRISPR_ID: NC_009523_37
• CRISPR_location: 1980540-1980665
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_37

Consensus_repeat	Method
CCGACCACCCCTTCAGCAGGTGGCGGATTCGGT	CRISPRCasFinder

spacers of NC_009523_37

>37.1|1980573|60|NC_009523|CRISPRCasFinder
CTGCCGCCATCACCGCCGCCCCCTGCCGGGGGCGGATTCGGCTTGCCTCCGGCAGCCCCA

CRISPR arrays and Neighbor proteins around NC_009523_37

CRISPR arrays

The CRISPR arrays of NC_009523_37

>merge|NC_009523|37|1980540-1980665|CRISPRCasFinder
CCGACCACCCCTTCAGCAGGTGGCGGATTCGGTCTGCCGCCATCACCGCCGCCCCCTGCCGGGGGCGGATTCGGCTTGCCTCCGGCAGCCCCACCGACCACCCCTTCAGCAGGCGGCGGATTCGGT

>NC_009523|37|34|1980540-1980665|CRISPRCasFinder
CCGACCACCCCTTCAGCAGGTGGCGGATTCGGT	CTGCCGCCATCACCGCCGCCCCCTGCCGGGGGCGGATTCGGCTTGCCTCCGGCAGCCCCA
CCGACCACCCCTTCAGCAGGCGGCGGATTCGGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956363.1|1990529_1991501_+|hypothetical-protein	unknown	unknown	gnl|CDD|223021
NC_009523.1|WP_041333337.1|1963689_1963872_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333341.1|1976302_1977220_+|EamA-family-transporter-RarD	unknown	unknown	gnl|CDD|225510
NC_009523.1|WP_011956362.1|1989772_1990465_+|hypothetical-protein	unknown	unknown	gnl|CDD|237865
NC_009523.1|WP_011956353.1|1972706_1975379_-|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|273050
NC_009523.1|WP_011956356.1|1977703_1980004_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|227335
NC_009523.1|WP_157041010.1|1966698_1968243_-|DUF4131-domain-containing-protein	unknown	unknown	gnl|CDD|377126
NC_009523.1|WP_157041012.1|1988008_1989415_+|hypothetical-protein	unknown	unknown	gnl|CDD|223021
NC_009523.1|WP_011956360.1|1985361_1988061_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|274368
NC_009523.1|WP_011956352.1|1971554_1972607_+|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl|CDD|187557
NC_009523.1|WP_011956348.1|1963905_1965906_+|hypothetical-protein	unknown	unknown	gnl|CDD|368494
NC_009523.1|WP_011956365.1|1994393_1994657_+|hypothetical-protein	unknown	unknown	gnl|CDD|223652
NC_009523.1|WP_011956359.1|1983079_1985215_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|380161
NC_009523.1|WP_011956364.1|1991560_1994155_+|helicase	unknown	unknown	gnl|CDD|274800
NC_009523.1|WP_011956354.1|1975636_1976065_-|peptidylprolyl-isomerase	unknown	unknown	gnl|CDD|223976
NC_009523.1|WP_011956358.1|1981526_1982939_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|223936
NC_009523.1|WP_011956349.1|1965917_1966751_+|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl|CDD|274915
NC_009523.1|WP_011956351.1|1968493_1971388_+|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NC_009523.1|WP_157041013.1|1994928_1996101_+|hypothetical-protein	unknown	unknown	gnl|CDD|274833
NC_009523.1|WP_011956366.1|1994653_1994917_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956363.1|1990529_1991501_+|hypothetical-protein	gnl|CDD|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	1.21924e-10
NC_009523.1|WP_041333341.1|1976302_1977220_+|EamA-family-transporter-RarD	gnl|CDD|225510	COG2962, RarD, Predicted permeases [General function prediction only].	9.78035e-102
NC_009523.1|WP_011956362.1|1989772_1990465_+|hypothetical-protein	gnl|CDD|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	3.48789e-07
NC_009523.1|WP_011956353.1|1972706_1975379_-|FAD-binding-oxidoreductase	gnl|CDD|273050	TIGR00387, Glycolate_oxidase_subunit_glcD., glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. [Energy metabolism, Other].	9.96183e-158
NC_009523.1|WP_011956356.1|1977703_1980004_+|GAF-domain-containing-protein	gnl|CDD|227335	COG5002, VicK, Signal transduction histidine kinase [Signal transduction mechanisms].	1.46968e-47
NC_009523.1|WP_157041010.1|1966698_1968243_-|DUF4131-domain-containing-protein	gnl|CDD|377126	pfam03772, Competence, Competence protein. Members of this family are integral membrane proteins with 6 predicted transmembrane helices. Some members of this family have been shown to be essential for bacterial competence in uptake of extracellular DNA. These proteins may transport DNA across the cell membrane. These proteins contain a highly conserved motif in the amino terminal transmembrane region that has two histidines that may form a metal binding site.	1.35124e-48
NC_009523.1|WP_157041012.1|1988008_1989415_+|hypothetical-protein	gnl|CDD|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	4.76174e-14
NC_009523.1|WP_011956360.1|1985361_1988061_+|HAMP-domain-containing-protein	gnl|CDD|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	5.80863e-51
NC_009523.1|WP_011956352.1|1971554_1972607_+|dTDP-glucose-4,6-dehydratase	gnl|CDD|187557	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs. This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	7.59986e-172
NC_009523.1|WP_011956348.1|1963905_1965906_+|hypothetical-protein	gnl|CDD|368494	pfam05547, Peptidase_M6, Immune inhibitor A peptidase M6. The insect pathogenic Gram-positive Bacillus thuringiensis secretes immune inhibitor A, a metallopeptidase, which specifically cleaves host antibacterial proteins. A homolog of immune inhibitor A, PrtV, has been identified in the Gram-negative human pathogen Vibrio cholerae.	1.10112e-28
NC_009523.1|WP_011956365.1|1994393_1994657_+|hypothetical-protein	gnl|CDD|223652	COG0579, COG0579, Predicted dehydrogenase [General function prediction only].	0.00179781
NC_009523.1|WP_011956359.1|1983079_1985215_+|GAF-domain-containing-protein	gnl|CDD|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp|Q2G2U4.1|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	4.5842e-45
NC_009523.1|WP_011956364.1|1991560_1994155_+|helicase	gnl|CDD|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	5.94349e-26
NC_009523.1|WP_011956354.1|1975636_1976065_-|peptidylprolyl-isomerase	gnl|CDD|223976	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones].	2.536e-41
NC_009523.1|WP_011956358.1|1981526_1982939_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl|CDD|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	7.99758e-122
NC_009523.1|WP_011956349.1|1965917_1966751_+|GlcNAc-PI-de-N-acetylase	gnl|CDD|274915	TIGR04001, thiol_BshB1, bacillithiol biosynthesis deacetylase BshB1. Members of this protein family are BshB1 (YpjG), an enzyme of bacillithiol biosynthesis; either BshB1 or BshB2 (YojG) must be present, and often both are present. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	4.97278e-34
NC_009523.1|WP_011956351.1|1968493_1971388_+|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	4.5958e-31
NC_009523.1|WP_157041013.1|1994928_1996101_+|hypothetical-protein	gnl|CDD|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	7.09712e-151

Protein sequences

>NC_009523.1|WP_011956356.1|1977703_1980004_+|GAF-domain-containing-protein
MTVTQPSLVGEIYDQPVNEAEQRSEVLSNLLDVSTYLVSVLDPTELFAGLVRRVVEVVPAVQAGLLWIYDRQQMALRLESYYGLDLGPATEAICRLRLRPGEGLAGEALRRGEPLLIETRSSYRDLARRVSPRSEPDICAFLERLPRELTAVILPLRIGAEVIGVLELMNLGNRPQLRRTDLQVLQTFSNLAAGAIKNAQLHAQMQAHQRRLEAFGAIGTVISTAADLDELMRNVLDVVLGVVEASVGVLFLLDPGRGVLQPGAWRHVPPQFVEQNREIQVAGAACEEAVRYGQPIRRPLIVGTGEELLLEAGLAGCAYVPLLAGGTVVGVIGIYGDASLPERIDVQTVMMMSNLIGFAIANVRLYQESHIERRKLTAVINSIVEGVVLCDRLGRLVLANRTAMELLSSDSFTSFPYQQPISSMVDFYAIRDLEGRMLPVERLPLARALAGEVFHDYRVLLRGASGEDTVMSFSGAPVYGDMNTIEGAVVIFRDITEHQKLERAKDDFLAVAAHELRSPLAAVRSYADLLIRREQRRDKEDTTELRGLTILSQQVSHMLRLVDNLLDMSRLDAGLFSLQLQQVNLVALTHQVIEQLRPVIGERDVTLTCDAPDLLVICDPLRIRQVLTNLLVNAVRYSGPGSPVEIAEVVIRSDVLAARYAHQPPATLRALVGEMQRHPRPLALITVRDHGIGMSEETMQRLFQRYARGRHRSGEGLGLGLYLSYEMTVRHGGTIWAESIEGRGSTFYVALPIGGPHQDKSPDAAT
>NC_009523.1|WP_041333341.1|1976302_1977220_+|EamA-family-transporter-RarD
MNRGVLYAAGAYACWGLLPVFWKSLQHVDALEIVAHRIIWSLAFAFVLLTLGRRWSRIGVTWRDRRVLATFLATGMLLTANWFVYVWAVNADHIVETSLGYFINPLINVLLGALVLKERLRIGQGVAMSVALAGVLYLTFQYGSFPWIALILACTFALYGLLRKTAPLDSLDGFTLETALLTPMMIIFLIYRELTVQTAFAHGDPLTWTLLIAAGPITAAPLLLFAAGARRVSLVTLGVLQYIAPTLQFLIGVVVYGEPLTPARLIGFVLIWTALAIYTFDSLVHRRSTAAAMPSPSMRIDASCD
>NC_009523.1|WP_011956354.1|1975636_1976065_-|peptidylprolyl-isomerase
MATAQTGDTVTVHYTGTLEDGTVFDSSHGREPLVFTLGSGQVIQGFEEAVIGMQEGEKRRAVLTPDQAYGEYHDELIFSLNRDELPPQIDPAIGEQYQMRRPDGQTFIVTVRDVSPSEVTFDANHPLAGATLTFDIELVAIE
>NC_009523.1|WP_011956353.1|1972706_1975379_-|FAD-binding-oxidoreductase
MTTADTQALLADLSTRLGPDRVIVDPAQLITYEVDGSFDRGHPDGVVFPRSVDEVVQLVRWAARHQIPLIARGSGTGLAGGAVPEHGGVVVQLGLMNHVLDIDLTGRSAVVEAGVVNLIFDTRVRQHGLFFPPDPSSQRTATIGGNIGTNAGGPHCFKYGVTSNYVTGVEVVLSDGRIIHTGGRALDIPAYDLTALFVGSEGTLGIITRADLRLLRDPPAVRTLLAAFDSVEQAGKAVSAIIARGLVPATMEMMDSSIVRIVEEYAHPGLPLDAGAVLIIEVDGYPESVGPQIAEIEATLRDCDVREVRVAQSAAERDRIWFARKSAAGAMARLAPAYYLVDGTVPRSKLAETLAAVNRIIEADGFRTGHVFHAGDGNLHPLILIENPSDRALIARVLETGRKILEVCVAAGGSITGEHGVGIEKRAFMPLMYGATELSLMWDVKDIFDPTGMMNPGKVLPPRDEVMAGLHNAQEPQPGRMSPAATGSLSESAPTAPVLIAPESAEEAAERLRDLTSAGQSVRIRGGGTKSALLPPADAVVSTAHLSGIRVLAPDDLYITVGAGTCLEELQKAVHPYGMWAPIASPWSTATIGGTIAANLNAPLRMRYGSLRDLILAATVALPNGRVARIGRPVVKNVAGYDLPKVHVGAHGTLGLLCDITIKLTPLPRMRATLIAAPRRIAQALETGAKLAQHSLIASAVLLLEVADDGRWAASLPVSLDRRPMTLLVYTAEGLAEDVAAELAAVRTVLRNAGIPALQIEDPSGSDLWGAFLSAAQPDDLMVRIGVAPRDIGALLQRAGFGGQESYVADVAAGQVYVRAPAPHPDDAGRILERLRTAARTLGGYAVALAAPARARIDRWGFTPDALDKMQALRRRWGADGLLNPGAFLV
>NC_009523.1|WP_011956352.1|1971554_1972607_+|dTDP-glucose-4,6-dehydratase
MRTILVTGGAGFIGSNFVELMLTKYPDYRIVVYDKLTYAGRLENLARFHGDPRFTFVRGDICDPAGVREVIRAHGVDTLVNFAAETHVDRSIMDPDAFIRTDVYGTYVLLEAVKEMKLERALFVSTDEVYGHIEPGHSSSEDDPLKPRSPYAASKAGGEHLAYAYYITYGLPVLITRGTNNIGPYQYPEKAVPLFITNAIDDIPLPLYGDGRQMRDYQYVMDHCEGIDVVLHRGVIGEAYNIGSGVETENIVMAKAILDLLGKPYSLIQPVADRPGHDRRYSVRTDKIKALGWQSRHTFAQAIEKTVRWYVEHQDWWRPIKSGEFKEYYRQQYLERQTVSYRSQNAPSQM
>NC_009523.1|WP_011956351.1|1968493_1971388_+|N-acetylmuramoyl-L-alanine-amidase
MRVLIIAPLRLVTIAMMLLIVLSLVLPFHSSDAQEKTGDLLPERTVAVPGGDAALAMIDEAGSYLMAPVQTTRPFSHLVIRYDAQVPPGATLTLFVRTSDDGVGWTEWAELVSSDDLRRPEDSPDVVWSDIIDVGSLMRFWQVRVLMSPAPDGALPIPGVIEAHTVDALTGPATPPATEFVLPQSTGPGKPPVVSRTAWGSPDGQGSRARPAYYPVSHIIVHHTADGNTLSPGQPNWAARVRAIWSFHAITRQWGDIGYNYLIDPNGVIYEGRSGGDDAVGFHDTANYGSMGIALIGTYSGVAPTPAAQESLVRLIAWKAAQKDIDPLGRSYYYGCSRSSKCLPFNPGAIVPNIAGHRQVTPGHTTCPGDATMAILPDLRNRALALMRGSDGTYDNGDLVIDERESGFSRSAANWYSAACGAGGHALYTFATNNPAESANRGVWRPNLPYRGTYRVLAHIPRDCGLGPLTGRARYVIHSASGSVTVPISQESVEGWVDLGVYTFDAGSNGAVELDDLTGEPLSARRIVMFDAVKWVPEHSQASAQIVAVRFARETLAAGELLRVDVTVRNTGSTILSGQEPRVDLTAGGGMNDPANAYVYEQHECFAGSPTGAFPTFPKEAGRIRIALGMPGWSALYGGGCAGPTSDYPWRWGLNGDLAPGEEQTITGYVRFHTPGAYPLRVGMVHEYVRYLAQDVAATTITVTDERTPPDAATFDEWLRPTAWVYRLDAVPDSLLARAGEAQALLSGVEVGSFVWHGELLDWGDGGPLGLHDRFVIAQTRIFYAPISGEYTFRTISDDGSWLLVNGQTVVTNSGLHDRTEATGTIYLDAGFHALSVVFFELRGMAVSGYDVRLPGSGTFQQIPDGLSDTPRLGGTFLSPAALTLAADDRGGSGVTAIRWSLNGSTWQTAVGSIVRINLPSDGLFHVRYRAIDAAGNEGPVRELRARVDSNMTIHRVTLPLVMR
>NC_009523.1|WP_157041010.1|1966698_1968243_-|DUF4131-domain-containing-protein
MTLIILAIAWMIGVFLADALHLPLWHLVAGSVGCGVAAIVLRRRALIRMVFLVLCVATAGGARLAAAEIPILPHSIRLLNDGAEVQIRGRIIEDPRRLADGQRVIFAAESVRSGGTWKPAEGLALVTLPRYPERFYGDRLELTGVLTTPRAAARPGDFDYRVYLARRGIFSLMKPERSRLIAVNQGNPVMATLLGFRDRARQTLLRELPEPQAALAVGILLGLQSSIPDDVLDHFSATGTSHILVISGWNITIISAALYSLADGMKLARRKAFWTVLITIWVYTLFVGATPTVIRAAVMGSIVVLGQRLERPAHAWTTLFAACWAMTLWNPQTLWDMGFQLSALATASLFAYGKGTEALLMRTPLRAGWLDWAREALTATLAAQILALPLILYAFGNLSLIAPIANVVMLPMVPSAMLFGALALVGGMIWLPLGQLLALPAYLFLAWLTEGARLFGQLPWAAVQLPPFPLWLLLAYYTIVIGAWLWNATVEDGSRPPLTALPERTERGGAGSPA
>NC_009523.1|WP_011956349.1|1965917_1966751_+|GlcNAc-PI-de-N-acetylase
MADERLRILIFGAHPDDVDFTAGGTAALYARQGHEVLCVSVTNGDAGHQTEAGAYLARRRRAEAEAAGKVIGARYITLDNHDGELLPTLENRRQIIRLIRQFKPDLMMSPRPNDYHPDHRYTAQLIQDAAYMVTVPNVCADTPHLESNPVIVYVSDTFQKPYPFTADVVVAIDEVIDLKFAMLHAHTSQMYEWLPYNQGILHEVPEGDAERLAWLRRRLDGRMRQDADRFRDLLIELYGAGRGRTVVYAEAFEGCEYGGRLTPENLHRLFPFFPAER
>NC_009523.1|WP_011956348.1|1963905_1965906_+|hypothetical-protein
MHSPRARQRSTLLSVLATCAIVAILSACTAPSEKPPIAPSPTPLSTLPTVAPSATPALLSATPIPSPVAVAAPIDEIAAIAAHQPAPRDQHALAVAFNGIDAPDAGWREPLDVQPGAVETFWVADVSNGVNYTVTAQLRYAGPVVLMYVDTTLDIPQYDIERSAKVFEERIYPRNRFLFGAERVPGIDGDVRLTVLNTRIRGAGGYFSSADGVSRAVNRFSNERDMFVIDAVAFPPGSETYNATLAHEFQHMIHWHRQPRSPAWFNEGLSTLAEDLNGLGDNGATLAYLRNPDTQLTTWFSGSGVSRHYGAAQLFMRYVYEQYAGESRPADWIDADAGNNPQALADLAARRRPDVVRFEHLFADWAVANVLNDPSVGDGRYAYRGLPVRAATAPLSAGTTAADVRQFGVDYFGPLEGPLTIRFDGADTVSLVGALPVEGRFAWWSNRGDESVSTLTRRFDLRRVAQATLRFRLWHELERHYDYAFVTVSTDGGVRWQTLPGITTSTDDPQGHNLGHGFTGISGAPEVALGSVRGRWIEERMDLTLFAGQEVLVRFWVISDAAINGPGLLIDDIQIPEIGFADGAETDDGGWQAEGFVRTSGILPQRWTLRLIVFDGDHVQVVAPAVDSQGRAEMQITEGQRAILIVSGVTPGTTEPASYSIDVSIP
>NC_009523.1|WP_041333337.1|1963689_1963872_+|hypothetical-protein
MARPALGDNNAPRPRFVYTFIVTLLDCASLLAASISGLCPHDNAIFRLPNPVIRQTHSAV
>NC_009523.1|WP_011956358.1|1981526_1982939_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MKIIVVGTGFVGLTHAAVCSEYGHEVYAYDIDHQRIEAYRSCRPEAIEHYVHEPGLTSIILENHGRYLFFVDDVESVIEGADALFLCLPTPPKPDGSSDLSYYFAAARYLAELLARRRDQRRVVVINKSTVPIGTARQLERVLREYNVPNAGVASNPEFLPEGDAVEKSRRPDRVVVGADNEEDFRIIRRIYSQFVNHVRIRYIETTPETAEAIKYVANTLLLTYISFWNGVGARLAETFPNIIMEDLKRGVTADARISTWGSYVSNGAGGSCFGKDIQSLIYQLKTAGQSVDILQSVYGINEYQKTYLIDRAIREAGVSFNNKTVALLGLAFKQRTNDMRDSSALKVVEALLGRGVRSIRAYDPMALREARKFFDPEKNHLFERISYHTSVREALAGTDMLFISTDWEEFRGLSRTIEETVSPPYLVIDGRRMIPDYTELVAAGYGYLAVGSPYMPPGDTLPGRGRSRL
>NC_009523.1|WP_011956359.1|1983079_1985215_+|GAF-domain-containing-protein
MEAQVPTNQMYDIVEWTSSDDPLLESLGRIAQSVERATTLDQLLHLSLIELTRLCRADRAIALLKDVQGRAVWVCEYPQSGDAPELTLDAISGAADAMRLRRPIIVHPQEQALLARDVRVLLVAPLIARDETLGALAICSAHATRTFDSKDVALIRALSGQIALVIMSHRSCESVERRTQELKTLNDIASVVTSTLDTREVYRLVVQQLSDYFHVEAGSLLLVDEATGDLEFVMTIEGGEEKLAGFRVPAGQGVVGHVVRTGRWEIVHDVSRDPRFYRQISEATGFSTRSILCVPMIAKGRVIGAIELLNKIGGDFDEEDALRLMRMAAFIAVAIENARLFQQVTAGRDRMASVLRSTADGILMADMRGEIQIANPLAVEICGCPEESLIGRRIDDVVAELYARAHDITTPSWSQEVAVPAQISDLAFASGAHRYVRLIRLPVYDAQNEPRGELLILRDITQERDLEQLREDYTSMLVHDLRAPLTSIMNGVMMLQRGIVGPVTEQQQELLKIAYQGSQTMLHLINTLLDISKMEQGRMDLDLKPLPIFSVIDQAIERLQHLASSRGVTIEQRLAPYLPPVEIDGEKIVRVLQNLLDNAIKFSPAQGVVTIGAFLAGGTHAPPDDVPVHVTFNDSRDYLVVWVQDRGPGIPPAYFQRIFEKFGQVRGRKVRGTGLGLTFCRLAVEAHGGRIWVESEEGAGSVFAFALPING
>NC_009523.1|WP_011956360.1|1985361_1988061_+|HAMP-domain-containing-protein
MRGLVSVFRSHIRYKIILPYLALTLVVMMAGAAIAVGLVAASWEERLQNQLAQVARNTTDALVRRERNNLEFLRQVVFAPANQDIPAVADAFASGDDEQVMRALEPYYRFGVGSVNLDFDRMIAFDRNGKTLVDWLRVSEDPDALPARITTTDLSGLDFVRAIVSGTTIDGNDKFANLIYFAPDVQPYFYTVAPVRRGNDVVGGVLIAVKCDRLLASLERSSQAAVTTFYDLSGRAISTTLLPRAELSTLDMPPQVLQALLNGQAQSIFTVELRQRGYQLAYSPLVIANVQVGYFSVGLSRDFQVQQLSLSRNIVTAIAIVLATGSVILGYQIARRITRPLADLVATAEAVTGGDLEARTTVMSPDEFGRLALAFNQMTEHLARLYRTSRDLNQAIEVTPVLKVAERAVRSLLPDADVLALIAEEGALRYHVDEGLPAIVRSLRHVRVPVSDPLVREISETQQAVLLSSQDEPRLTAFGLTQVAGYQSLLLSPLVVQDEPAGVLIIAHREPAAFTGSVLPSVVAIANMTTSVLYNAVLFDRVQREALRRRAILESIADGVVVLDRQRRILIVNRAAEQMLGMSDWRLVQRSFSDIPLTRVEVRHEMFSENGATQRDLYRLGDRVLRLSHAPVTTDEGTQIGEVVVLHDISAEVAVDQAKTDFIATISHELRSPLTVIYGYTDLLLRGMVGELSGEQRDLLEAVRNRVELMNNIVRNVIMVASIEANTLQTDFAAQDVRRMIDEAVAPMRKSFEKKGLALTVTTPDDLPPVRADREQLLIILGQVIDNARRYTQQGEVTITAHQRDNGMVQIDVSDTGPGIPADAMNRLFTRFFRVEGNNSPERGSGLGLVITRQLVERHGGKVWAHSEVGRGSTFSIALPIAHEYTNTITSPGGTGATA
>NC_009523.1|WP_157041012.1|1988008_1989415_+|hypothetical-protein
MSTQTPSPARAERARQPEPLRWIIASALLLALLSICCVAEIVTRALIPRDLATALNLLSKDRADYRPWLLPPGLAAIPPEVAAAEAAERATATSVALRGTPTVPVVGSVPTIQVPVVPPALDAPTPTPGDVLIVEPPTVTPRPVGSLPTNTPVIATIEPVTNTPTQPPLAQPTATSTTSPESQPTNPAQPPTATGISQPTDTPLPASPTVRLSPVPTRTPAPVPTDTPIPTPSEAPTPVPTDTSTPVPTATFTPVPPTPVPPTPVPPTPTFTPIPTPTPTFTPIPTPTPTFTPIPTPTPTFTPIPTPTETPIPTPTETLTPTPTETPTPTPVPNVQVTKSAAPNPVQVGQTITWTIGVLNTGTTPITVTRIYDTFEFSGTPVFSIGSCNSPQGGSCTRGGFNTDATWTGTVTLAPGQSMQLLISGVFPSQPPPGSDARCNIRWEVDVTGIGTIFSPGSTALCVDVLPP
>NC_009523.1|WP_011956362.1|1989772_1990465_+|hypothetical-protein
MRALLLMSALILVLAACGTPAATGNGAPAPATGETAALPSATPLPTGEAATPLVVEPSATPAATLPTDEAETPQAEPQTTPVIEPPSAASPTTAASPQPTPAAPQATIAATPVPPPPNVTTLALPSPALQPPPAMVGEQAVLPNDLLTRLIDDLALRSSSDPAAISLVGAEAVIWNDGSLGCPQPGVAYPQVQIEGYRVLLRIGDRDYDYRVGRRGSFVLCEQGRPVRSP
>NC_009523.1|WP_011956363.1|1990529_1991501_+|hypothetical-protein
MDPLPPRRPSVQLILAALAFLTGVIILVVRFGGILPAPKVEVSTLPPMTAAPAGRATESAPVTAPTAPPFPAPTVSPVTPAPSILATVSPEVFPSATPLPSSVTVSPTVAPAAMLTPSPAIVLPTIAPMSSPSPSLTPLSATLPSTMPAAPPVPTAPATAGTTPVVPTAVAGSPSVPATAGTTPVVPTLTASSPTATLTATASPARSTATVTLTPDPDAPTPSPSPTSTPTTRRLTLFVQGTQPQAEISYEIDDTEVVVGSDVVLPWQATIEVAADRDVRLMAAGVAEIGDLRCQITGDTVPTPIIMYDSNPYPAVECLLRGS
>NC_009523.1|WP_011956364.1|1991560_1994155_+|helicase
MFIVQSIRDIIQAIARQRTRGENTPLIMLRVLDEASGERISHLPVDPQLAQAWLAYSGEPFRPHQAHALAALRRGEPAALRSSSPHVTATLQLLARAALAESPRATVIVLAFDDEHAHALYVSFESANQSLPSHLRASVTTTSAQQVDPFARIVIATPEALHGRVLRYHARAWGMLWNGLSLILIPDVHRYTGVAGAHLADLLMRAHRVAVAHGAAPGFLASLINVHDPAPALNALLGKSWRVIDADDGPRTATVVAVWQGGGAWLRETAELATVLRRQSYRVHVLCDALERAALAPAIGDAGEITVGPEIEPAQVLVCAGFPGSISACRRLLAAGHQAVIVVIGERPQEQALVRQVSMILEGPPTMWPVPSANAYVLAQHVVCAASELPLSAADVDAWGCAEVVQRMSANGQLVELPDDEPLWIPSGDADPYAEFSILAASGGAITARSEQPRIRERLDPTLFERWAYAGAALPPGVGGLRVVLRDEEEGSISLRLETSGRRTYPLRRGNVTIRDVHDERGLLRDQRVAWGRVVAQETIYGWREATPGAPPADVALNAPLESRWVAPACWFELPLALQVQGQFIGWCLTAAVTLRALASFTDLVPLYDHERRRLFFVDAQPGGNGLAQWLYQHAEDVLPIAYDVALACRSDPLLEPLSRVDQDWLLALLGRVPVEPPRRSEPATHLPPVASPDERRQSNAASGSPAVDPQPRRERREARIPAAPPPVDKPQSSAGKRASAQQPPDRQSAPETPATPAQAQATPSEEASADVAALIERLRRQREQRERSKNREMHVQPAPETDSEPRFTTGERIFCLPFGDGEVLESRIEAGREVLVVRFPDYGELTIDPALSLVRKIDTSQGL
>NC_009523.1|WP_011956365.1|1994393_1994657_+|hypothetical-protein
MPHERIDYPELLRSLGQFIQQQHLNEVAILEFDRGWIISGVTYQNTAQGFIRVAADFVLSHEELRHIIQQMRDQRKPEPPRKGRWLG
>NC_009523.1|WP_011956366.1|1994653_1994917_+|hypothetical-protein
MKLFRGLAKTDYQDVLRAIGLFIDEHGYTDVRIIEIEDGVVLQGRVREQRGIGASSYETFLITDDDLKEMVRTAAERRGQKPPAFTQ
>NC_009523.1|WP_157041013.1|1994928_1996101_+|hypothetical-protein
MPGHTIRTSRRLGAALLLAVVAGAGARYLMIRAAGSMPRPRMIDWLQARNVGVAVSQSYLAPMIDRAARQDQYRQLVQRSEPLIAAYMGVRLPRPVERIYVFDRAEWIEANLSAFQSLFAPLEELYDEISARQGVVGLLMGQLNSQLLGMQMGALIGFLARRVLGQYDLGLLSPDPDLRGALYFVEPNITRICAQLGLDGDDFRMWIALHETTHVFEFEAFPWVRDYFQDLLRQFIGRVNDQAAMLSVGIVRLIERLLQGQPIDRHWIELMLTPEQQAIFTRMQALMSVVEGYSNHIMNVIGGQLLPSYQQIEARVRQRQLRRPLIEEAFNRLTGMDLKLAQYQQGEAFIQAVVAARGARFANRIWEGPEYLPTMEEIRAPQRWIARMGG

Crispr_ID: NC_009523_38

• CRISPR_ID: NC_009523_38
• CRISPR_location: 2038700-2038822
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_38

Consensus_repeat	Method
GCCAGAAGGTGGCGCTACGCCAGCATTCGCTCC	CRISPRCasFinder

spacers of NC_009523_38

>38.1|2038733|57|NC_009523|CRISPRCasFinder
CCTGCCCACACCTGCGCCAGCATCGCCGGGCACGCCGGAGCCGGAAGCGCCTTCACC

CRISPR arrays and Neighbor proteins around NC_009523_38

CRISPR arrays

The CRISPR arrays of NC_009523_38

>merge|NC_009523|38|2038700-2038822|CRISPRCasFinder
GCCAGAAGGTGGCGCTACGCCAGCATTCGCTCCCCTGCCCACACCTGCGCCAGCATCGCCGGGCACGCCGGAGCCGGAAGCGCCTTCACCGCCAGAAGGTGGCGCTATGCCAGCATTCGCTCC

>NC_009523|38|35|2038700-2038822|CRISPRCasFinder
GCCAGAAGGTGGCGCTACGCCAGCATTCGCTCC	CCTGCCCACACCTGCGCCAGCATCGCCGGGCACGCCGGAGCCGGAAGCGCCTTCACC
GCCAGAAGGTGGCGCTATGCCAGCATTCGCTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041333354.1|2037033_2037228_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956403.1|2040602_2041280_+|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|224566
NC_009523.1|WP_011956398.1|2034405_2035971_+|phage-tail-sheath-family-protein	unknown	unknown	gnl|CDD|226028
NC_009523.1|WP_011956405.1|2043055_2043346_+|type-VI-secretion-protein	unknown	unknown	gnl|CDD|269823
NC_009523.1|WP_011956410.1|2048871_2052033_+|protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956393.1|2027358_2029011_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956412.1|2055321_2057175_+|protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_157041014.1|2045939_2046992_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|274050
NC_009523.1|WP_011956406.1|2043352_2043745_+|GPW/gp25-family-protein	unknown	unknown	gnl|CDD|377431
NC_009523.1|WP_011956394.1|2029047_2029872_+|DUF4157-domain-containing-protein	unknown	unknown	gnl|CDD|379338
NC_009523.1|WP_011956396.1|2033007_2033424_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956407.1|2043757_2045788_+|putative-baseplate-assembly-protein	unknown	unknown	gnl|CDD|274051
NC_009523.1|WP_011956401.1|2037232_2037661_+|phage-tail-protein	unknown	unknown	gnl|CDD|377718
NC_009523.1|WP_011956404.1|2041272_2043042_+|VgrG-related-protein	unknown	unknown	gnl|CDD|226032
NC_009523.1|WP_011956399.1|2036036_2036477_+|phage-tail-protein	unknown	unknown	gnl|CDD|377718
NC_009523.1|WP_011956409.1|2046984_2048592_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|378402
NC_009523.1|WP_011956411.1|2052096_2055318_+|protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_011956400.1|2036660_2037029_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956395.1|2030057_2032982_+|DUF4157-domain-containing-protein	unknown	unknown	gnl|CDD|379338
NC_009523.1|WP_011956397.1|2033430_2034393_+|DUF4255-domain-containing-protein	unknown	unknown	gnl|CDD|379449

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956403.1|2040602_2041280_+|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|224566	COG1652, XkdP, Uncharacterized protein containing LysM domain [Function unknown].	3.03789e-05
NC_009523.1|WP_011956398.1|2034405_2035971_+|phage-tail-sheath-family-protein	gnl|CDD|226028	COG3497, COG3497, Phage tail sheath protein FI [General function prediction only].	2.37308e-60
NC_009523.1|WP_011956405.1|2043055_2043346_+|type-VI-secretion-protein	gnl|CDD|269823	cd14738, PAAR_2, proline-alanine-alanine-arginine (PAAR) domain. This domain is found in the PAAR (proline-alanine-alanine-arginine) repeat family, where it forms a sharp conical extension on the VgrG spike, a trimeric protein complex of the bacterial type VI secretion system (T6SS). The T6SS is responsible for translocation of a wide variety of toxic effector molecules, allowing predatory cells to kill prokaryotic as well as eukaryotic prey cells. The pointed tip of the PAAR domain is stabilized by a zinc atom positioned close to the cone's vertex and is likely to be important for its integrity during penetration of the target cell envelope. VgrG proteins are orthologous to the central baseplate spikes of bacteriophages with contractile tails, and genes encoding proteins with PAAR motifs have been frequently found immediately downstream from vgrG-like genes. It has been shown that PAAR proteins are essential for T6SS-mediated secretion and target cell killing by Vibrio cholerae (encodes two PAAR proteins) and Acinetobacter baylyi (encodes three PAAR proteins); inactivation of all these PAAR genes results in inactivation of Hcp secretion as well as T6SS-dependent killing of E. coli.	4.94433e-38
NC_009523.1|WP_011956410.1|2048871_2052033_+|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.33144e-115
NC_009523.1|WP_011956412.1|2055321_2057175_+|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.17136e-109
NC_009523.1|WP_011956406.1|2043352_2043745_+|GPW/gp25-family-protein	gnl|CDD|377431	pfam04965, GPW_gp25, Gene 25-like lysozyme. This family includes the phage protein Gene 25 from T4 which is a structural component of the outer wedge of the baseplate that has acidic lysozyme activity. The family also includes relatives from bacteria that are also presumably lysozymes.	1.42467e-29
NC_009523.1|WP_011956394.1|2029047_2029872_+|DUF4157-domain-containing-protein	gnl|CDD|379338	pfam13699, DUF4157, Domain of unknown function (DUF4157). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteristic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.	1.20786e-34
NC_009523.1|WP_157041014.1|2045939_2046992_+|FHA-domain-containing-protein	gnl|CDD|274050	TIGR02242, putative_secreted_protein, phage tail protein domain. This model describes a region of sequence similarity shared by a number of uncharacterized proteins in bacterial genomes, including Geobacter sulfurreducens PCA, Mesorhizobium loti, Streptomyces coelicolor A3(2), Gloeobacter violaceus PCC 7421, and Myxococcus xanthus. In all cases, the genomic region resembles a phage tail region, based on tentative identifications of neighboring genes. A region of this domain resembles a region of TIGR01634, another phage tail protein model. [Mobile and extrachromosomal element functions, Prophage functions].	2.55946e-22
NC_009523.1|WP_011956401.1|2037232_2037661_+|phage-tail-protein	gnl|CDD|377718	pfam06841, Phage_T4_gp19, T4-like virus tail tube protein gp19. This family consists of several tail tube protein gp19 sequences from the T4-like viruses. This family also contains bacterial members which suggest lateral transfer of genes.	3.40469e-62
NC_009523.1|WP_011956404.1|2041272_2043042_+|VgrG-related-protein	gnl|CDD|226032	COG3501, VgrG, Uncharacterized protein conserved in bacteria [Function unknown].	1.51527e-30
NC_009523.1|WP_011956407.1|2043757_2045788_+|putative-baseplate-assembly-protein	gnl|CDD|274051	TIGR02243, hypothetical_protein_SCD8A.17c, putative baseplate assembly protein. This family consists of a large, conserved hypothetical protein in phage tail-like regions of at least six bacterial genomes: Gloeobacter violaceus PCC 7421, Geobacter sulfurreducens PCA, Streptomyces coelicolor A3(2), Streptomyces avermitilis MA-4680, Mesorhizobium loti, and Myxococcus xanthus. The C-terminal region is identified by the broader model pfam04865 as related to baseplate protein J from phage P2, but that relationship is not observed directly. [Mobile and extrachromosomal element functions, Prophage functions].	7.57268e-108
NC_009523.1|WP_011956409.1|2046984_2048592_+|methyltransferase-domain-containing-protein	gnl|CDD|378402	pfam10119, MethyTransf_Reg, Predicted methyltransferase regulatory domain. Members of this family of domains are found in various prokaryotic methyltransferases, where they regulate the activity of the methyltransferase domain.	7.84448e-23
NC_009523.1|WP_011956411.1|2052096_2055318_+|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.08342e-109
NC_009523.1|WP_011956399.1|2036036_2036477_+|phage-tail-protein	gnl|CDD|377718	pfam06841, Phage_T4_gp19, T4-like virus tail tube protein gp19. This family consists of several tail tube protein gp19 sequences from the T4-like viruses. This family also contains bacterial members which suggest lateral transfer of genes.	1.93734e-54
NC_009523.1|WP_011956395.1|2030057_2032982_+|DUF4157-domain-containing-protein	gnl|CDD|379338	pfam13699, DUF4157, Domain of unknown function (DUF4157). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteristic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.	2.47437e-34
NC_009523.1|WP_011956397.1|2033430_2034393_+|DUF4255-domain-containing-protein	gnl|CDD|379449	pfam14065, DUF4255, Protein of unknown function (DUF4255). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 320 amino acids in length.	5.51406e-27

Protein sequences

>NC_009523.1|WP_011956401.1|2037232_2037661_+|phage-tail-protein
MPTTEEAYPSYRFYVEIAGVPQAVFTEVSGLQIETEITEYEEGGNNDFVHRLPGRTKIGNITLKRGMTSSNELLQWFLKIARGSIDRRNVTVIMYDSAGKELFRWNFIEAYPVKWTGPQFTAASTEAAVETLELTHNGMTIG
>NC_009523.1|WP_041333354.1|2037033_2037228_+|hypothetical-protein
MSEPVPPRRSAPAAPDASSADQREQSERTIDIEALAERVYRLMREEARLERARGVTVGKQRRKR
>NC_009523.1|WP_011956400.1|2036660_2037029_+|hypothetical-protein
MLQTEFPFVLPCGYVDDQGNLHREGSMRRATAIDEIEPLEDPRVQRNEAYLSILLLSRVVTRLGTVGVITPAIVERLFATDFLYLQDLYIQINAAAPHVVETQCPTCGARFAIDVGVGDMTG
>NC_009523.1|WP_011956399.1|2036036_2036477_+|phage-tail-protein
MTDKDPLISAWFGVDFGDGVVGAFRECTGLGSENEVVESKASGPDGKYIIKKIPGRMKWNNITLKRGITDAMDMWKWRKMVEEGDIQGARRNGTITMFNTRGEPVARWKFVNAWPSKLTGPDANATNNEVAIETLEIVHEGYERVQ
>NC_009523.1|WP_011956398.1|2034405_2035971_+|phage-tail-sheath-family-protein
MPEYLSPGVYIEEVSSGPRPIEGVGTAMAAFVGFAAAGPVNQPVLVTSWTQYVEKFGRLDESGRRNPHMDGAYLSHAVYGYFLNGGGRCYVTRIPQQSDGKAPQMPRLELPTRASKALTSLIVTPKSETASDIQVEIGPPVGENPPPEAFTVKISMGEIKEVYENVSFNKRPKDGTSYVVEKINSSSTLVQVAEGPATGSLADRVPEFGMSVIKPPAPLAPARVDATSFVGSAAERSGVEGLEIAEDVTMICAPDLMSAYQSGAITKEGVKAVQLAMIAHAERMQDRMVILDPLPGLTPQQVKQWRERDTNYDSKFAVLYYPWIKIMGPDGKTEMEIPPCGHIAGIWARNDNTRGVHKAPANEVVQGALGPAIAITKGEQDVLNPIGVNCIRSFTGMGLRVWGARTLSSDAAWRYVNVRRLFNYVEKSIERGTQWVVFEPNDPNLWARVKRDVEAFLTVCWRDGMLFGLTPREAFYVKCDEELNPPEVRDQGKLIIEVGLAPVKPAEFVIFRFSQFAGGGA
>NC_009523.1|WP_011956397.1|2033430_2034393_+|DUF4255-domain-containing-protein
MIADLHPAIRHLLFSRGLIPSDEVDVRFERPTKEWLDSLVRPTINLYLFDIEENTDLRQTNMPVMRGSGGATYRMPPRRFDLRYMVTAFTTVADDEYLLIYRALATLLRYPTLPPSALAAAMAVIAGREGSGAEQARFAALADAGERTTSRDLRSAVASAELGSSTRAAMLALLDDPPITARIATGDEGPRLLEVWNTLEQAPRPSLLYIMTIPVDLDLAIDTPLVLTRMLRIRQRTEAGGSAEHMRIGGVVRDQHGTPLEGVVVGIEGGAIETVTNNEGRYALSHVPVGKVTLRVTRPDGSVRIIPVETPSDTYDISLD
>NC_009523.1|WP_011956396.1|2033007_2033424_+|hypothetical-protein
MPIDPHRDYTRQDQLALDLTELFAGGLRDEHGQLPLTLQGIGSAAMALQTEQAGVPLPMFNRMLTTANEISLQRARAMPEELVEELEKRGFPQIARIIRAGIDACRDDADYRNFVRWLIQVRNLIVFRAQTGGAASRK
>NC_009523.1|WP_011956395.1|2030057_2032982_+|DUF4157-domain-containing-protein
MTVRRASPIRRLEKTGHHEIVRRTSPTDDAPTGHRFSHDFRQVRLSSAEPPVTFEAETEEAQQGESLQSEEVEATRTHPTQRVLSGSWLVQRQEGASGSASIFDEITAEAAALRPGLPTTFADYRQRIQSATFLGVSISGGVDQEMAGVLQRAERELNFTPGSRNQHGVYQIGGMDASRLHGLHSWGLAIDINTPTNPYIMHEAGEAQLDQQLAPVYDRIAWFILGRSSVIPRQIQQSSGGSREQRIGDMYDRLAEESQAMQTYFRYMQNVAELEQYLSTPEGYERYLLITHTTEPDRSMPPDIEALRRQMMADFAVLTSRPGPVIQPIENEQAGASVAPPLTYPHPERLEGRQDRPFDRGGSRRTPLRGFLDLEREVVMALTRAGLRWGACELGAESGDIMHFDMALQPLGQAVFQAIRTVKARHRSSARPAQRMTASSGDAVPDVSPAIESDIDAMRGGGAPLDPTTRAFMEPRFGHDFSRVRVHTDARAATVARSLDALAFTVGDDIAVAPGQYRPGSDEGRALLAHELTHTIQQTGGATRVQRQENVNTGSPSTGNGSSPGSGRRMISYGSQGQDVADAQQLLNQHGAAPPLVVDGIFGPKTRQATIEFQKSRGLAPDGIIGPLTWGALESGAPQPQPPGPQPQPPGPQPQPPGPQPQPVERWTNEDRTMIAAHIQPGVLTAYQASRIEPAVMALADAEYTSFRALLQNAGSAMERAFLCKALAAGRSLSDITDFAATIHGMSDNWLLRNLNVVDLNEADGVERGIIQQYGNSCGPTSVQVIRASADPIYALALRSAGPIEQASEHAVSAPDTIPNQMLAGEQKAILDTHAATGTGNPATDRTQPTGGAWVEGEMNALASATGVTYQTRIVGTQITLDAALDVLRTNLTAGIFVPIVVGGSVGDTAHYVMAMAISGNRIQIHDVATGDTIWRTEQEFKDSALNLPSGHKMLTAIDVPTAVPTTQPQPATP
>NC_009523.1|WP_011956394.1|2029047_2029872_+|DUF4157-domain-containing-protein
MNDRIVLRRQRQSIHHRSMRSDLSPDSSLLFASGNALRGHTFNAIAIHHHAPLGAPQTRLTVNTPGDAYEQEADRVATQVLRMSDEEVLTARAGEGIQRLTSEEEEEELLQAKEESGATPQVLAARAGEGIQRLTSEEEEEELLQAKEESGATPQVTPETQAAIDAMRGGGAPLDPTTRTFMEPRFGHDFSQVRVHTDARAATVARSLDALAFTVGNDIAFAPGQYRPGSDEGRALLAHELTHTLQQTGGAARVQRQEAGAERAASSDNATLKR
>NC_009523.1|WP_011956393.1|2027358_2029011_+|hypothetical-protein
MTERQRIFLQRRRPVETAAQRSTARAVAEQSAPVSTGHLFNQMRLGALFPATLPHVQRKEPSSDATTSTGAPANGLVTVDAAINPLVGLKRGDGLTYGTWDLRPRVKLLQHKLNEKTGAGLNVDGMWGPKTSAALESFMLSRSTVPAEIVDQNTADALLDRKKETPGPGPQPIPPGPQPVESTYNQTLEDTLDAVWLQYQLTFEGQRGGLQKLEKDLAQIEKPKNVIVEALKDAGKAALDALLGLGGGALRVPIKAALAGLGETIAKDGVDKVFDKAQEAASTEVGKKVDELGSEDGPTLETFIEAQRAALEEASSQTQEAFLLETRARLRQPASGEPVSSGPEDPRVLRARRLLNAVKQERPQAFQKQYDESLAKWAIAQAQSKLGTMDSPSRSVGDEKVKTTDMSKAKPDMPGVLTFEIEGTKPDMPVKITGAKIVGLSEKTRQTLERQQRSILDLGLPRYASGKVEINTGLGSILNFTKPTIRIAQNETSDLFERESTEGGKEWLKKKARPFEEVLTEDLVKEGMRMVWEEIDRKRLSEVPGGLKGP
>NC_009523.1|WP_011956403.1|2040602_2041280_+|LysM-peptidoglycan-binding-domain-containing-protein
MPDTSLVKAKIINLDDPSQEVECLFNPKEYTFTKQNSWSRGETPSTNVPQLEFSGGQPATLSMHLLFDTYTSARPGSKPRDVRKVYTDKLWSFMMIDPNLQDPKSTRGRPPKVRFQWGTSWSFKAVITNITQKFTLFLVDGTPVRAELDVTFQQIEDTANLQPQNPTSGGVGGERVWRVRDGDTLAWIAYKSYGDATRWRPIAEANGLERVRELTPGAVLVIPHE
>NC_009523.1|WP_011956404.1|2041272_2043042_+|VgrG-related-protein
MSDNRHVADLYLKLDGADAPRELVGDMLEITVENSLHLPDVATIVLNDRRLKWVDDSRLAPGGLIEVSARHGRTTESIFDGEIVEIEPQFEAEGLKVTVRAFDRLHRLGRGKHTRTFLNVTDSDVITQLANEAGLQVQIDATTQVHPYLVQWNQTNLEFLRERAAALGYLMYVRRKTLHCTRLPSPGAPVELKWGTDLVAFRPRLSTIDQVNEVTVRGWDPLEKKAVVGKATSASVAPRIGAPETGGKLAQQAFAIKAEDALESAARIQPEAERIARAILAHHESRGVEAEGTAAGNPKIVAGAAVKITNVGTRFGGTYVVTSATHRYDASGYVTDFSVSGMNPATLLSLVQPETPRLNFEGLVIGVVTDTNDPDKRGRVKVKFPTLADQQSDWARVVSVGAGNRRGIEFLPEVNDEVLVGFEHGDVRAAYVIGGLWNGKDQPPKAPAEIVKNGKIEQRVIKSRSGHIITLDDSDSAPSITIEDKSGNVIKLDSKKNELTINVKGDGTISADGNLTIQAKGKVNIKSQQALAIEGSTGLDLKSNASASLQANANLDLKASAAATLQANATLDVKSSAILTIQGTLVKIN
>NC_009523.1|WP_011956405.1|2043055_2043346_+|type-VI-secretion-protein
MPPAARVGDMHTCPLSDGPKPHVGGPIMPPGVPTVLIGGLPAAVVGGMATCAGPPDTIIKGSATVMIGGMPAARMGDQTAHGGVIVMGFPQVDIGG
>NC_009523.1|WP_011956406.1|2043352_2043745_+|GPW/gp25-family-protein
MSDFLGVGWAFPVGLDARGRVALARQEVDIEQAIIMILLTPKGQRLMRPTFGCQIHDLIFAPNDAATAGLAVYYIEEALAMWEPRIDVLNVEIDTDPKTPERMLITIEYRIKATHDRRSLVFPFYRIPGE
>NC_009523.1|WP_011956407.1|2043757_2045788_+|putative-baseplate-assembly-protein
MPLPTPNLDDRHFQDIVDEAKRLIPRFCPEWTDHNVSDPGVALIELFAWMTDLLLYRVNQVPDKVYITLLNLIGIQLEPPQSAVAPVTFYLSAPQETAITIPADTEVATVRTETSPAVIFTTETDLTIHPAMVVDDKVYTRQVERPNMPANWRANELRQLLLPNGRIAMFAPNPLPHDAFYIPLRHNHGNHVLALVVDCDVARGAGVDPTNPPLVWEVWQGGVARWSPCEVEFDGTGGFNMPGEIVLHLPPMAPDTIQGVTAHWLRCRLTDAQADTPENRHNRYKVSPELLDFRVESRGGTVNARHAVTVRNEVIGRSDGTPGQEFQLLNRPVLSRDPQRDILIVDPPLPGRLREWVEVPDFAASGPDDQHYTLDSLSGTVSFGPALLQPDGAVRNFGSVPPHGSVITMTRYQYGGGVVGNVQANTLTTLKTSIPYVSRVTNRRAAEGGRDPQGLDDARVRAPQILRTRTRAVTADDYEHLAREVVGVARACCIAPGAQPGSPADPRPGQVLVCILPQTDNPVGRIPPEALTLSAELRARVLEYLDRRRPLGIALDVRPVQYLWVSVEVRLRVPARSDQALIRAVQQDAEETLYRYLNPYVGGPQGDGWPFGRDLHVSEIYALMQRLPQIEFVEEVQIGLTEPGSTAKPQVVSPRLDVPRHALICSWQHRVSVSAS
>NC_009523.1|WP_157041014.1|2045939_2046992_+|FHA-domain-containing-protein
MEHNVEPDFGRLIIRSADGERVVTLRQPQYTIGRNPARDLHLDSPVVSNMHGRIEAGPQGAQLIDLGSTNGTFIGERRLPPNQPYPLVPGEEVRIGPFLLIYVPPGVTYPPEEVALPVAEAPEPLPIVVERPSAAEALFDEAAAGEEGAGGESAAAVETPEAPGAPPAPPEAPVFVAQEFPERMPVRYTAPPDGLDSRYLRYLPAIFQENEFLGRYLRIFETIWEPLEWRQNHINLYFDPRTCPPSFLPWLAGWLDLAINPYWPESRIRRLIAEAADLYRWRGTAYGLKRLIEVVTGLTPTITEHPAQPFVFHVSLVIPPGSDVDAILIDDLVRTHKPAHAGYILDIRHG
>NC_009523.1|WP_011956409.1|2046984_2048592_+|methyltransferase-domain-containing-protein
MDDITAMLRRSYDEAPYPGRAYAHTHPDYMAALATLLGLNPPPVAHCRVLEIGCAAGSNLIPMALSLPEATFVGIDLSPRQIADGRRIIETLGMTNVTLLVRDVQEVGDELGQFDYIIAHGVYSWVPAPVRDRLMALTKRSLASHGIAYISYNTYPGWHILGALRDLMIYAARGVEDPRERARIALALLDMLAESDSENANAFHSFLAAYAGQFRSVLSRLGSLSHAFLIHDALEVVNEPVSFAQFAAHAAQHGLQYLSETEFPMVLPLGLKPETVDAIRSFSRSGIDLEQYMDFLRGRQFRQTLLCHDHVTVRRTLRPERLMGMSVAALMHPETQPLDLAGSEWVVFRNLHGVAFSVSAPITKAALICLAEASPRAVAFEDLVVAAQRRAVAAGASLEDTEPSALARRLGGDLLRAFATATSLVSFHLHPPAVATRPGERPKVTPLARLEAQHGEEVTNLYHDVISLDPFDRHLVQSLDGRHDRRALEEMMAAAVTAGEVPYAGDDGRAASLAGLAADIEQRLNWFAQVALLVE
>NC_009523.1|WP_011956410.1|2048871_2052033_+|protein-kinase
MTEFIGQTIGNYRVEAVLGAGGMGQVFRARHIHLDRPVALKVMHANLSHDPGFQARFRQEARAIAALQHPNIVEVYDFGEQNGLMYLVMELLSDGSLRGLMQKHAREGKPWPLLLAIDLVRQAAEGLAYAHSQGMIHRDIKPDNMLLRAVSGAPGRYTLKITDFGLARMAEGSTMTATGTAMGTPAYMSPEQCQGAHVDLRSDIYALGVVLYEVATGYLPFTAATLSEAAYKHVFVPPTPPRQVRADLPSELEEIVLRCLAKRPEERFASAAEVAASLKALLARPDPTLTHATVMAHPNEAPPVSPQGVAPPPPPPVVAPPQPTAVAPSSGTLPPAIPSLPGAAHLPRIQVRDSSGNLLRVVELTSDGVTVGRQSTNTLVLESEGVSRSHLRVDWDGRQVTVTDLGSSNGTLLGATRLPARAPHPWGWREVVRVGPFWLRLEPPARLAEQGGALLQQLLDAQPTATPPPAAATRPMPTGMATASISTGRIGVVLEDKTLTLNPGQPAPLRLTLANLGTVVDHFSIEVDGAPAEWVRQPADALQLMPGVQMPVVLTVTAPRSPASRAGDYQVTLRVRSRENPSEVGVAHGQWTVLPFAAPVLSLAPKRAAGRGQARFTTTLRNNGNAPIQCALRAEDDEHALRYRFDPPEVTLDPGAEVDVPTTVTGPQRWFGREQTRSFMVGAVVAGGEGPPVATGQFVQMPIIPAWAVTLLLLLIPLCLGGVFFGNEMLVVRPAAATATAATAEAAGVIAAANTATAIVVNTAVQATIEAKETVALVQQQTIAAAPIETQIAFQSEQNTQIAQAQQTQQAQQAQQAAAQQTQQAQQQQQQAAQQTQQAQQAIQQATQQAAAQQTAAAAAQQATQAVLDAQATQQALDAQATMAAAANAETASAVAAQQTTLAQTAAVVAAQQTSVAATATTQAAAFNAFLGDWVNVDTATSGMTRLVIEKQNETNYTFHGYGKCTPSDCDWGVIQVPYTSGQLVGVYDFGFKTTRITVRLQGDDLLAEVFDDYRPSDPRPDRTTNYVLRRQWVLRPDIIIQPPLILRLTPTP
>NC_009523.1|WP_011956411.1|2052096_2055318_+|protein-kinase
MTEFIGKTIGNYRIEALLGAGGMGQVFRARHILLDRPAALKLLHGNLAQDPMFQTRFRQEAQAAAKLRHPHIVEVFDFDEFEGMAYLVMELVTGGSMRGWLRSAASQTAGSLVQGLELVRQAADALAYAHAMGMVHRDIKPDNLLLQPGFAGRGPTMKVADFGLARMTEGSNLTATGMAMGTPAYMSPEQCQGKPLDGRSDIYALGVVLYEVATGTLPFVVKTVSEAVFKHVYVPAPSPRQVRPELPDIVEAIVLRCLAKLPEERFATAADLAAALSEALGAIAPDLAIGEDEGGAMLTDIAARTRIQTPRGGPAPVALTLMGGGSLPRVQVLDDAGTLLQVVAVRPGGLTVGRVERNDVVLTGEGVSRHHLRLEWDGIQVLATDLGSSNGTLLEERPLPPQEAVVWPWRTMLRVGSYWLRLDPPERAESGQVATPSGGALMTPQTVATPGGGVMTVPPLSGGSAPLPYSQAFVTTGLVGMTLEPETLAVTPGQTATVAVTLANLSDQVDHLTVSVTGVPETWVTLPPAAQMPPRGQTTVMLAVRPPAEPDARAGEYPVEVSARSRARPAEGGSVLARWTVRPYVREELTLSPGRARGRMRGVLRATVRNLGNAAVRYRLQGEADEAGVQATVAPEELVLDAGATGSAMVTVEGPLKPFGGETTHGVTLSATADHGATLRAHGMWVQGALLPVWSLIAVVLMAGFGVSHVFGALPASLAGGLPGYAILRSGERVNADIAGQSGALPTPAATATQAPTAEPVAPVEPTVETGAATPTVETGAVITNDQATATAVAASGGNGANAGGGSGGDSGSGGGGGSGGAGGSGGSGGAGGAGGTGSAPTATATATRTPTPTATPTPVATAASTATPESTATLEPTVTPEPTATPEPTSTATALPTNTPTLAPSNTPTPTETPIPPTPTPTHTPTPTPTHTPTPTPTHTPTPTHTPTPTVTPTPTNTPIPTVAVPLHRAPPNGAVFYHFPRDTILQWAQVSGAVSYRVEIDCFHCCGWGVWCTDVGRTWRVESVPHIDGASFNEFRFSWVGAQPGRWRVSAIDANGREGPRHEWWYFEFRQ
>NC_009523.1|WP_011956412.1|2055321_2057175_+|protein-kinase
MNELLGQIIGNCRIEALLGSGGMGQVYRVRHMHLDRLQALKVMHAHLASDPGFQARFRQEAQAIAALEHPHIVRIFGFDEQQGRYYITMEYLPDGSLRTLLDRRARDGATWPLHFGLDLVRQAAEALDFAHTRGIVHRDIKPDNILIERHAGPGGRSLYVVKLTDFGLARMVEGGGGITASGMTVGTPAYMSPEQCQGLPVDGRSDIYSLGIVLYEVVTGYLPFTVSRISEAVEKHVYAQPPSPRTVAPDLPVAVEAIILRCLAKKPEERFATGAELAQALRRVMQMPEPAPLPAPEGLTVRVLGSGGQVVQEAPLTDQGLTVGRRAGNQIVLDDPAVSRNHLHIEWSGRRVRVKDLGSRGGTLLDGTHIKPHEPHTWNIGQSLGVGPFTLELVQRRDDQFGIALAPGQESLEIVAGQPVTVDVTLVNRGAADTLTLAVEGWPAAWVHLPDQPVRVDGSAQLAVRLTLQTPVTAGVRFGAYQVRVHARSTTQPQIGASIEATWTVIAPPSLTVQVSPATARGRDRARYTVRLTNQGGTVAHVVLMAEDSGQALAYNFGRHEVHLAAGETVDVPLEVRCDRRIFGGVQTHHFVVTAAVLGAGSTQATAAFVQTALLSI

Crispr_ID: NC_009523_39

• CRISPR_ID: NC_009523_39
• CRISPR_location: 2110396-2110504
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: Cas9_archaeal,csa3

Consensus repeat of NC_009523_39

Consensus_repeat	Method
GTTGCATACTGCCTTGCCACAAACAAGGGGGGAACACT	CRISPRCasFinder

spacers of NC_009523_39

>39.1|2110434|33|NC_009523|CRISPRCasFinder
GCCAGGCAAGCGCCAGCGCAATCACGCCGTCGT

CRISPR arrays and Neighbor proteins around NC_009523_39

CRISPR arrays

The CRISPR arrays of NC_009523_39

>merge|NC_009523|39|2110396-2110504|CRISPRCasFinder
GTTGCATACTGCCTTGCCACAAACAAGGGGGGAACACTGCCAGGCAAGCGCCAGCGCAATCACGCCGTCGTGTTGCATACTGCCTTGCCACAAACAAGGGGGGAACACT

>NC_009523|39|36|2110396-2110504|CRISPRCasFinder
GTTGCATACTGCCTTGCCACAAACAAGGGGGGAACACT	GCCAGGCAAGCGCCAGCGCAATCACGCCGTCGT
GTTGCATACTGCCTTGCCACAAACAAGGGGGGAACACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956463.1|2121624_2123004_-|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl|CDD|237001
NC_009523.1|WP_011956450.1|2107209_2107881_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_009523.1|WP_011956458.1|2117976_2118612_-|orotate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234771
NC_009523.1|WP_011956448.1|2105060_2105756_-|suppressor-of-fused-domain-protein	unknown	unknown	gnl|CDD|377450
NC_009523.1|WP_011956457.1|2116826_2117960_-|glycosyltransferase	unknown	unknown	gnl|CDD|340828
NC_009523.1|WP_041333374.1|2109876_2110383_+|HNH-endonuclease	Cas9_archaeal	cas9_archaeal	gnl|CDD|224321
NC_009523.1|WP_083763363.1|2103523_2103901_-|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|238042
NC_009523.1|WP_011956447.1|2104089_2105064_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011956453.1|2110546_2112490_-|PhoX-family-phosphatase	unknown	unknown	gnl|CDD|225752
NC_009523.1|WP_085979448.1|2101512_2101902_+|methylglyoxal-synthase	unknown	unknown	gnl|CDD|179969
NC_009523.1|WP_011956455.1|2113037_2115521_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956460.1|2120115_2120487_+|YraN-family-protein	unknown	unknown	gnl|CDD|173141
NC_009523.1|WP_011956449.1|2105752_2107198_-|DUF3459-domain-containing-protein	unknown	unknown	gnl|CDD|200477
NC_009523.1|WP_011956444.1|2102089_2103148_-|permease	unknown	unknown	gnl|CDD|223773
NC_009523.1|WP_049767489.1|2121139_2121556_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|341362
NC_009523.1|WP_011956451.1|2107889_2109476_-|LCP-family-protein	unknown	unknown	gnl|CDD|224235
NC_009523.1|WP_011956445.1|2103269_2103509_-|thioredoxin-family-protein	unknown	unknown	gnl|CDD|379063
NC_009523.1|WP_011956456.1|2115564_2116737_-|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341473
NC_009523.1|WP_011956459.1|2118855_2120109_+|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl|CDD|223411
NC_009523.1|WP_011956461.1|2120543_2121092_+|N-acetyltransferase	unknown	unknown	gnl|CDD|100048

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_041333374.1|2109876_2110383_+|HNH-endonuclease	Cas9_archaeal	cas9_archaeal	4.6e-11	36.6	0.0
NC_009523.1|WP_083763363.1|2103523_2103901_-|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	1e-17	59.3	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956463.1|2121624_2123004_-|2-oxo-acid-dehydrogenase-subunit-E2	gnl|CDD|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	5.06339e-158
NC_009523.1|WP_011956450.1|2107209_2107881_-|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.44131e-25
NC_009523.1|WP_011956458.1|2117976_2118612_-|orotate-phosphoribosyltransferase	gnl|CDD|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	2.57322e-56
NC_009523.1|WP_011956448.1|2105060_2105756_-|suppressor-of-fused-domain-protein	gnl|CDD|377450	pfam05076, SUFU, Suppressor of fused protein (SUFU). SUFU, encoding the human orthologue of Drosophila suppressor of fused, appears to have a conserved role in the repression of Hedgehog signaling. SUFU exerts its repressor role by physically interacting with GLI proteins in both the cytoplasm and the nucleus. SUFU has been found to be a tumor-suppressor gene that predisposes individuals to medulloblastoma by modulating the SHH signaling pathway. Genomic contextual analysis of bacterial SUFU versions revealed that they are immunity proteins against diverse nuclease toxins in polymorphic toxin systems.	4.52977e-21
NC_009523.1|WP_011956457.1|2116826_2117960_-|glycosyltransferase	gnl|CDD|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	1.53652e-36
NC_009523.1|WP_041333374.1|2109876_2110383_+|HNH-endonuclease	gnl|CDD|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	7.85772e-28
NC_009523.1|WP_083763363.1|2103523_2103901_-|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	3.44787e-16
NC_009523.1|WP_011956447.1|2104089_2105064_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	3.90124e-30
NC_009523.1|WP_011956453.1|2110546_2112490_-|PhoX-family-phosphatase	gnl|CDD|225752	COG3211, PhoX, Predicted phosphatase [General function prediction only].	0
NC_009523.1|WP_085979448.1|2101512_2101902_+|methylglyoxal-synthase	gnl|CDD|179969	PRK05234, mgsA, methylglyoxal synthase; Validated.	3.50212e-69
NC_009523.1|WP_049767489.1|2121139_2121556_+|CBS-domain-containing-protein	gnl|CDD|341362	cd04586, CBS_pair_BON_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	2.81412e-29
NC_009523.1|WP_011956460.1|2120115_2120487_+|YraN-family-protein	gnl|CDD|173141	PRK14678, PRK14678, hypothetical protein; Provisional.	4.13142e-62
NC_009523.1|WP_011956449.1|2105752_2107198_-|DUF3459-domain-containing-protein	gnl|CDD|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NC_009523.1|WP_011956444.1|2102089_2103148_-|permease	gnl|CDD|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	1.20274e-68
NC_009523.1|WP_011956451.1|2107889_2109476_-|LCP-family-protein	gnl|CDD|224235	COG1316, LytR, Transcriptional regulator [Transcription].	1.46635e-51
NC_009523.1|WP_011956445.1|2103269_2103509_-|thioredoxin-family-protein	gnl|CDD|379063	pfam13192, Thioredoxin_3, Thioredoxin domain.	2.87286e-26
NC_009523.1|WP_011956456.1|2115564_2116737_-|iron-containing-alcohol-dehydrogenase	gnl|CDD|341473	cd08194, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like. This family contains iron-containing alcohol dehydrogenase (Fe-ADH) most of which have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. It is distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.	0
NC_009523.1|WP_011956459.1|2118855_2120109_+|Glu/Leu/Phe/Val-dehydrogenase	gnl|CDD|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	0
NC_009523.1|WP_011956461.1|2120543_2121092_+|N-acetyltransferase	gnl|CDD|100048	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.	6.35284e-57

Protein sequences

>NC_009523.1|WP_041333374.1|2109876_2110383_+|HNH-endonuclease
MGQRVLVLNASYEPLQFISVRRAIVLLLQDKAELVEAAQQRLRARGISLEVPLVIRLVRYIRIPRRMRLPCSRRSILLRDRETCQYCGAQPGRAHLTVDHVVPRSRGGETTWENVVTACRDCNHRKGGRTPEEAGMTLLTIPRQPQYVAFALLGELERHDVWRKYAYT
>NC_009523.1|WP_011956451.1|2107889_2109476_-|LCP-family-protein
MANDYRQRSGNGTTARERIAARRRARRTTSWTTFALAIGALALLALLTAGVMALRQAGRVLERLEQEDPRQRATTAPLPLPTTLQPSNHDATVAATAPATSDQPSTQLLSRPFTVLLLGVDRRPNPEEGVRSDTLILVRVDPQARTASMLSIPRDSVAPIPHLGWAKINAAYGYGYANAAALYGAATDPSAAGGALAAEAVEQFLGVTVDYIAQVDFRGFERLVDTVGGVLIDVPAPILDAEYPTENYGVERIYIPAGLQVLDGRMALIYARTRHGSSDFERGRRQQQVLRALLDQVRARGLLDNAALLPRWIEVVSEHVRTTLPVSDLRAAAELAALARDLDGNRILQLSINPNDVAIDREDGSDIYWNPTDLAALVARWKAGPDLSVAPSITSLPTQAAAPDSPPLDPAQPTPTLLPAVAEPDTVVQVLNGARVEGIAGRVSAFLADRGFIIADPATVTRIYEHTVIIDYSGRPETRRRLAEALGIEARYVLATAPPDAPPPGYNVDIVVVIGRDYRQEWLSNDGR
>NC_009523.1|WP_011956450.1|2107209_2107881_-|Uma2-family-endonuclease
MTTLQLAIPYLESGDRLTRAEFERRYNAMPDGFKAELIEGVVSVASPVRFATHSEPHSRIITLLGVYAAATPGVRVGNNATVRLDWENELQPDGLLRLENGTSTIDADGYVCGPLEFVAEIAGSSAAQDMHAKLRVYRRAGVQEYLVWLVFEERIVWFTLDEGEYRQIPADPDHITRSRIFPGLWFDLPALLRGDMATALAALQQGIAAADHAAFVIRLRSGE
>NC_009523.1|WP_011956449.1|2105752_2107198_-|DUF3459-domain-containing-protein
MTIHTPDWVKHAVFYQIFPDRFAWSARVAKPNNLQPWDSPPTPEGYKGGDLLGVVERLDYLQDLGITAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNRAFRELLEACHRRGMRVVLDGVFNHASRGFFQFNDILENGPHSAYLDWFFIEGWPLHPYDGARPANYRAWFNNRALPKFNTDNPQVREFLMQVAEHWIRQGIDGWRLDVPFEITTEGFWQEFRQRVKAINPEAYIVGEVWRDARQWLQGDQFDGVMNYLFAGPTIAYAAGPRVDPAQVVGRDYVTSPPLTGAEYARVIDDVVTLYDWEIQLTQLNLFDSHDTARLLTIARGDRSSVRLATILLMTFPGAPSVFYGDEIGLEGGVDPDARRTMPWDRPETWDMAALAYHKRLIELRHTLPALRTGTFHTLYADDAVFAFARKLENQTVIVVVNNDDQPRRVSIPVAGMLPDGHDLIARYGNYRNRIIHGTLEVQAPARDGLILA
>NC_009523.1|WP_011956448.1|2105060_2105756_-|suppressor-of-fused-domain-protein
MTFDLNRFRATLDAAHVRNDDPTTLVFDNYLRWKGVPAFLVRPVFKNDAPPAEVFVSPHFTVLVYRANPLYTTLCTLGASYRTIPFSRASFGDERGVRYEYIMHAAPSHEQQVAQLLALIAEYPFIHTIEIGPGYILPVGEPVVPGSSMEYLYFTYPYLDDGRLYESDPWGQIERPDLLIQMLWVLPIYRSEAQFIRTNGMEAFEQRLQERHSRIYDAYDMLRLPVVEHVP
>NC_009523.1|WP_011956447.1|2104089_2105064_-|STAS-domain-containing-protein
MTQRQVVTALLIIQIFGTILLATGQVLRDASSIILPMSIAIAILLIVLLWAYRRGWEPARMIDIVIVTVAVGIATPDEFVVQRQALIALVPMALAQVLGGPRWVVGSALGMLAIFTLRAGSEHGFVTTYTADLRTIAIFIFIVASMALSRIIADTAVRNAMKQQQRAEEAFARIETQAQTLQEQTQALQAQNQRQQRLLDLVAQLETPAILLAEGVLLAPVVGPIDDQRAQSFVGRLLEAASLQRARLVIIDIAGASNVDSRAAALLGQAVQALRLIGCQVAISGISAELAHTLVTAGISFNGVPTVRTPREAIEHFQILIELS
>NC_009523.1|WP_083763363.1|2103523_2103901_-|winged-helix-turn-helix-transcriptional-regulator
MRSHETTFISEALIFKALMHPTRIALLEALREGEQCVCRLEEAFAMPQAYISQQLAVLRRVGLIADRRRGVNIFYRIAKPEVLQMIDLARTMVNSDAHSISAGTLSACTCARRTDRISTVLDSTE
>NC_009523.1|WP_011956445.1|2103269_2103509_-|thioredoxin-family-protein
MVSVKILGSGCANCKRLEAVVAKVIAERGIDAAIEKVTDYAHMMRWNILQTPGLVINDTLVSAGRIPSESEITAWLTQH
>NC_009523.1|WP_011956444.1|2102089_2103148_-|permease
MAQVLTSPAEHARAADRRAWLMVAGAAVVWLVAYRSIQPLANWLTYGLIGLQPGSHLGESVAFFLYDVPKILLLLSGMIFVISTVRSFFSPERTRALLTGKREGVGNLLAASLGVVTPFCSCSAVPLFIGFVEAGIPLGVTFSFLIAAPMVNEVALVMLFGLFGWQIAALYMAAGLAIAVASGMVIGRLQMERYVEDFVWQIRSGGGAVAATDPTWSQRFALAWQSTREIVGRVWLYVIIGIAVGAGIHGYVPEQAMADIMGREAWWSVPAAVLLGVPLYANAAGVMPVIQALIAKGAALGTALAFMMAVVALSLPEMIILRRVLKPRLIITFIGITAAGIVAIGYLFNLVI
>NC_009523.1|WP_085979448.1|2101512_2101902_+|methylglyoxal-synthase
MGRRPTLALIAHDRKKDDIVLFTLRHRDALAGCRLIATGTTGERIARATRLEVERMLSGPMGGDAQIAARVAQGEIDGVIFLVDPLYAHPHEPDIQGLLRVCNLYNVPLATNLATAELVIAGLPQGEAV
>NC_009523.1|WP_011956453.1|2110546_2112490_-|PhoX-family-phosphatase
MGGRDEQDKLIVRSVDGKGEHFEDILEQHLSRRSFLKTAAVTSGLVVAATAMGVDVATAQTRPAPMLPKFRKVSPTAPEVDEIAVPDGYYAATLIRWGEPIFADAPEFDVWTQTKEKQEKQFGYNCDYIGYFPLPSYTSNNSTRGLLVVNHEYTNPELMFPGYDVENPNPTKTQVDVELAAHGVTVIEVARGRDGRWNVVRNSPYNRRLTGYTPMTISGPAADHEWMKTSADPTGRNILGTLNNCAGGKTPWGTVLTAEENFHQYFANLRGLRDGDYRKAIHARYGMPTGASERRWENFYDRFDVAKEPNEGFRFGWIVEFDPYNPKSVPVKRTWLGRFRHEAATIVIAPSGQVVAYSGDDARGEYVYKFVSNGRYNPRNREANFNLLDDGMLYVARFNADGTGEWLPLKHGFGPLNEGNGFMSQGDVLIKTRNAADALGATKMDRPEDIETNPVNKKVYIILTNNSQRGVGSGPPVDAANPRANNRAGHIIELTEEGNNHAATRFTWNIFILAGLPTDESTYFAGYDKSKVSPIATPDNIVFDLAGNAWVATDGAPSAIKLNDGLFAIPVAGSERGHVQQFFSSVAGSEVCGPEFTPDNRTLFLAIQHPGEGGTFEKPISTWPDRQGLPRPSVITIQAFDNRRIGQ
>NC_009523.1|WP_011956455.1|2113037_2115521_-|hypothetical-protein
MASATNPSHSEPGAAGTDDAAAVRYAPPRFNLILDAVMVIAVAITSFVFLNRPLDTQHLVIIGASDRGIATGFHGAEISQADGRPFRWTTAEATVRLPAHGVTDHLLMLRLAAPTGVAPSMPQAVAVDLNRTHLATLPVLPAPRVYRLLAPHHRIAIAGNDITLRTATTRVPGDRRDLGVVAFAVTCAALNETAWLPSVQAAAVTGAAWALLIALRSSGIGALRWIVVALFTLISLSMRHSDLRFAHRWEALLLTLGLATVFALFLLITARWKGSEASVERSTFNAHHLAFPLITTGVATLLAVLLLAPLTPDPARFVPGPPGDNLEYVWKLQWFADAIAERRSPTFVPYLFYPTGYELAYSELTPAHTLLGLPLTLLAGSTLTYNVLIVISFVLTTLLTALLAERLGAGRLGAFAAGIGVGFCLWRYQHTLGQMNMIGTQWTVLALYGLEGFIRRRSSSDAALMGTGVALAAWSSWYYGPTLWLIMALWLLMRWPWKETRSLRTAGPAALTAPLVALALIAPYAQPTIQALRGGDTRHEYTSLLSLSARPLDYLTPSRYHATWGAWSAQIAPDTAGAQLVAPGFALLALAGVGAWRWRRSPITWTLLIIAGVCFVLSLGPELRLGDRTIPLPALLAYEHIPVLRSIRAWSRMAFYVQICVGLLAALGLTGFAQWRRAWQALGVVAVCGVLLEVAHAAPWSASTAPRPVDRWLATQPGSGATLQVPDSFSGAIEYYALFSKRPSLTGYGTFEPAGATADLVWLREFPSERALTTLRRLGGEYILVRRNAMDRERPGWRERATQQPELAQVYEDDEFTVYRIVTGPHP
>NC_009523.1|WP_011956456.1|2115564_2116737_-|iron-containing-alcohol-dehydrogenase
MMPPRAFLMPAQVLIGSGAVEQVGAECQKRGWKKALIVSDKIMLGLGLVGKVEQYLAESGIASTVYAGVNTEPVVEYVQEGLQTYREGNCDFVVAVGGGSPIDTAKAIAVLVTNPGSIEQYKGIGKIAAPGVPVVAIPTTAGTGSEATVYTVITDQKTDVKMLIGSPYLMPTIAIVDPMLTVSSPQSVTAATGVDALVHAIEAYVSVKRQPMTDIFCLSAIRLISQNIRQAWANGNNIEAREQMMLGAFQAGVAFSNSSVALVHGMSRPIGAHFHIAHGVSNAALLAAVTEFSLIGDPVRYAQIAEAMGEPIQGLSVMEAADRVVHAIRRLVSDIRIPSLKQLGVERERLIELAPSMADAAIDSGSPANNPRKPTRQEIIDLYIKAYDQE
>NC_009523.1|WP_011956457.1|2116826_2117960_-|glycosyltransferase
MESTNVASSAPAIRHDHAPALPVVWQSRWGLPIGYAVSSEALALELLSRGVELMYRPTPWHMPGVIRHPALRAAAARTPRDDAIQVSYDQADLFFTEHPGYKIGYTMLEVDGLPREWVAACNAMDEIWTPGRWGATVFADAGVTRPIVVMPLGYDPARFRPDGPARRIAGRFTFLSIFEWGERKAPEVLLRAYAAAFTRRDDVLLVLRVNNFDADVDVARQIAALRLPADAPPIVVIYNRQISDDSLGSLYRSADCFVLPTRGEGWGLPILEAMACGLPVIATDWSGQTEFFHSGVGYPLRVRRLVAANAKCPYYLGWRWADPDEEHLIALMRYVYEHPGEARQVGARAAQEAAARWTWAHAAERIHARLLAVAAPV
>NC_009523.1|WP_011956458.1|2117976_2118612_-|orotate-phosphoribosyltransferase
MVASSAYDIARVLIEAGAVLIRPYQPFTFASGLRSPIYCDNRILLGDVAARRIVIRSFAAHCTDASVVSGPATGGIPWVAWVAEMNGIPMAYVRSAAKGHGRGRQIEGAAVGGQRIVLLEDTVSTGESALQAAAAIRAEGGVVMRCVCIFTWGWRETTARFAATDLDLVALATLADVLEVAQHTGRLTADERTMIEAWAINPQGWSPPSDG
>NC_009523.1|WP_011956459.1|2118855_2120109_+|Glu/Leu/Phe/Val-dehydrogenase
MTMEQESALASAQRQFDIAADLLQLEPGLRRILRVPQRELTVTFPVKMDDGRIETFVGYRVHHNITRGPAKGGIRYHPQVTIDDVRALSMWMTWKCATVNIPYGGAKGAVVVDPRTLSMGELERLTRRYTSEISILISPDRDIPAPDIGTNPQIMAWIMDTYSMHSGHTVPAVVTGKPIDIGGSYGRREATARGLSYVLREAAEALSFPIAGARIVIQGFGNVGATCARLLEEMGATIVAVSDSKGGIYRRNGLPLASVIAHKQRTGTVAGFPEADQVTNAELLELPCDILVPAAIHSQITARNADRIRARIIGEAANGPTTPDADAILYDRGVFVIPDILAGAGGVTVSYFEWVQGLQEFFWTEREVNAQLERVMVGAFNHVLRVAHERRVHMRTAAYLIAVNRVAEATRIRGIYP
>NC_009523.1|WP_011956460.1|2120115_2120487_+|YraN-family-protein
MAERRRRLGDWGEAVAVAYLAQHGYQVVAQKWRCAAGEIDIVAQRDGVLAFVEVRTRRGVDPGMAAGSITGAKRARLMMLACLFLAAHDLPADTPWRIDVVAIAVASQGRVAIDHILAAVEET
>NC_009523.1|WP_011956461.1|2120543_2121092_+|N-acetyltransferase
MAFIHPTADVSPQAEIGEGTRVWHGAQIRERARLGKGCIVGKNVYIDFEVVIGDHVKIQNNSSLYHGLTVEDGVFIGPHVVITNDRIPRAINPDGSLKGAADWVVGRTLIRRGASIGAGAIIVTGVTVGEWALCGAGAVVTRDVPAHAIVAGNPARVIGYISAGGVRCATQEEAIERTAQER
>NC_009523.1|WP_049767489.1|2121139_2121556_+|CBS-domain-containing-protein
MEHKRVSDVMHYGVISCRVETPVEEAIELMQKHRIHALVVVDGPGYLAGIVSQTDLLRAWKEGSSFENVMRGPVGEIMTRSVITCMPEMELERAIQLLNRNHIHRLVVVEERNDGRFWPVGILSMTDIVRALETMQVP
>NC_009523.1|WP_011956463.1|2121624_2123004_-|2-oxo-acid-dehydrogenase-subunit-E2
MPDITMPKMGFDMQEGTIVRWLKKPGDAVRRGEPIAEIETDKVTIEIEAFESGTLTEIVVQEGQSAPVNAVIARLDGGNGSQAPVPVAAAPAVPPPAEVSPPPAPLPETPAPLAEPPADIGDIRASPLARRLAREYGIDLRQVRGSGPAGRIVKEDIEAYLSARGGAPAPTPVSAPPPAPAAVSAPPPAPAAVSAPPPAPAAVSAPPPAPAAVSAPPPAPAAVSVAQPTAGAVVPLSNMRKTISRRMIQSWQQFPHIFVSIEVDMGAALALRAQANAGRPREDQISVNDMVVKACAVALLAFPNLNASYSDDGIILHPTVNIAIAVALESGLMAPVVANCQDRSLGSIARETKRIVALAREGKITPDLLQGGTFTVSNLGMYGIPEFTSIITPPQAASLAVGAIRRTPAFKDDSDEVVAKHLMMLTLSADHRVTDGAEVARFLNDVKRLLEQPLALLVG

Crispr_ID: NC_009523_40

• CRISPR_ID: NC_009523_40
• CRISPR_location: 2227779-2227869
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_40

Consensus_repeat	Method
ATGGTCTTTGAATAAATAATCCG	CRISPRCasFinder

spacers of NC_009523_40

>40.1|2227802|45|NC_009523|CRISPRCasFinder
CTCCAGCCCGCGCAGGCGGGCTTCGCCTTGCCTGGCCGAGGGCTT

CRISPR arrays and Neighbor proteins around NC_009523_40

CRISPR arrays

The CRISPR arrays of NC_009523_40

>merge|NC_009523|40|2227779-2227869|CRISPRCasFinder
ATGGTCTTTGAATAAATAATCCGCTCCAGCCCGCGCAGGCGGGCTTCGCCTTGCCTGGCCGAGGGCTTATGGTCCTTGAATAAATAATCCG

>NC_009523|40|37|2227779-2227869|CRISPRCasFinder
ATGGTCTTTGAATAAATAATCCG	CTCCAGCCCGCGCAGGCGGGCTTCGCCTTGCCTGGCCGAGGGCTT
ATGGTCCTTGAATAAATAATCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041333394.1|2235557_2237033_-|phytoene-desaturase	unknown	unknown	gnl|CDD|274273
NC_009523.1|WP_011956552.1|2241046_2242027_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224050
NC_009523.1|WP_157041021.1|2219548_2220175_+|formylmethanofuran-dehydrogenase	unknown	unknown	gnl|CDD|225102
NC_009523.1|WP_011956551.1|2240421_2241063_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224095
NC_009523.1|WP_011956539.1|2226013_2226664_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NC_009523.1|WP_011956534.1|2221321_2221999_-|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226629
NC_009523.1|WP_011956541.1|2228168_2229512_-|DUF4038-domain-containing-protein	unknown	unknown	gnl|CDD|379072
NC_009523.1|WP_011956550.1|2239291_2240155_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_009523.1|WP_011956546.1|2233743_2234667_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_083763282.1|2242031_2242982_-|quaternary-ammonium-transporter	unknown	unknown	gnl|CDD|270332
NC_009523.1|WP_011956531.1|2218465_2219509_+|dehydrogenase	unknown	unknown	gnl|CDD|225916
NC_009523.1|WP_011956543.1|2231043_2231583_-|RNA-2'-phosphotransferase	unknown	unknown	gnl|CDD|179136
NC_009523.1|WP_157041278.1|2225229_2225970_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224051
NC_009523.1|WP_011956540.1|2226670_2227537_-|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|270248
NC_009523.1|WP_011956537.1|2224524_2225199_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NC_009523.1|WP_011956533.1|2220143_2221325_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009523.1|WP_011956535.1|2221995_2222802_-|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270257
NC_009523.1|WP_011956544.1|2231839_2232589_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235500
NC_009523.1|WP_011956536.1|2222924_2224241_-|DUF362-domain-containing-protein	unknown	unknown	gnl|CDD|377193
NC_009523.1|WP_011956549.1|2237299_2238844_+|hypothetical-protein	unknown	unknown	gnl|CDD|224720

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_041333394.1|2235557_2237033_-|phytoene-desaturase	gnl|CDD|274273	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	5.01689e-153
NC_009523.1|WP_011956552.1|2241046_2242027_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	6.598e-146
NC_009523.1|WP_157041021.1|2219548_2220175_+|formylmethanofuran-dehydrogenase	gnl|CDD|225102	COG2191, COG2191, Formylmethanofuran dehydrogenase subunit E [Energy production and conversion].	3.6501e-48
NC_009523.1|WP_011956551.1|2240421_2241063_-|ABC-transporter-permease	gnl|CDD|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	6.05772e-66
NC_009523.1|WP_011956539.1|2226013_2226664_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.21599e-63
NC_009523.1|WP_011956534.1|2221321_2221999_-|molybdate-ABC-transporter-permease-subunit	gnl|CDD|226629	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism].	7.96412e-79
NC_009523.1|WP_011956541.1|2228168_2229512_-|DUF4038-domain-containing-protein	gnl|CDD|379072	pfam13204, DUF4038, Protein of unknown function (DUF4038). A family of putative cellulases.	3.38015e-168
NC_009523.1|WP_011956550.1|2239291_2240155_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.79372e-27
NC_009523.1|WP_083763282.1|2242031_2242982_-|quaternary-ammonium-transporter	gnl|CDD|270332	cd13614, PBP2_QAT_like, Substrate-binding domain of quaternary amine ABC-type transporter; the type 2 periplasmic-binding protein fold. This group includes the periplasmic substrate-binding component of a putative quaternary amine ABC transport system that is predicted to be involved in uptake of osmoprotectants (also termed compatible solutes) such as betaine, choline, proline betaine, carnitine, and L-proline. The relative substrate preference of this group is not known. To counteract the efflux of water, many microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.52796e-149
NC_009523.1|WP_011956531.1|2218465_2219509_+|dehydrogenase	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	5.81507e-13
NC_009523.1|WP_011956543.1|2231043_2231583_-|RNA-2'-phosphotransferase	gnl|CDD|179136	PRK00819, PRK00819, RNA 2'-phosphotransferase; Reviewed.	2.14274e-90
NC_009523.1|WP_157041278.1|2225229_2225970_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.74755e-149
NC_009523.1|WP_011956540.1|2226670_2227537_-|transporter-substrate-binding-domain-containing-protein	gnl|CDD|270248	cd13530, PBP2_peptides_like, Peptide-binding protein and related homologs; type 2 periplasmic binding protein fold. This domain is found in solute binding proteins that serve as initial receptors in the ABC transport, signal transduction and channel gating. The PBP2 proteins share the same architecture as periplasmic binding proteins type 1, but have a different topology. They are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the family includes ionotropic glutamate receptors and unorthodox sensor proteins involved in signal transduction.	4.15404e-70
NC_009523.1|WP_011956537.1|2224524_2225199_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.15585e-70
NC_009523.1|WP_011956533.1|2220143_2221325_-|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.02068e-98
NC_009523.1|WP_011956535.1|2221995_2222802_-|molybdate-ABC-transporter-substrate-binding-protein	gnl|CDD|270257	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins that serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. In contrast to the structure of the two ModA homologs from Escherichia coli and Azotobacter vinelandii, where the oxygen atoms are tetrahedrally arranged around the metal center, the structure of Pyrococcus furiosus ModA/WtpA (PfModA) has shown that a binding site for molybdate and tungstate is where the central metal atom is in a hexacoordinate configuration. This octahedral geometry was rather unexpected. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.12754e-93
NC_009523.1|WP_011956544.1|2231839_2232589_+|SDR-family-oxidoreductase	gnl|CDD|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	3.80632e-82
NC_009523.1|WP_011956536.1|2222924_2224241_-|DUF362-domain-containing-protein	gnl|CDD|377193	pfam04015, DUF362, Domain of unknown function (DUF362). Domain that is sometimes present in iron-sulphur proteins.	2.77535e-11
NC_009523.1|WP_011956549.1|2237299_2238844_+|hypothetical-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.50184e-12

Protein sequences

>NC_009523.1|WP_011956540.1|2226670_2227537_-|transporter-substrate-binding-domain-containing-protein
MQKQTLIMLAFIAASLVMSACGGAPAAQPTQPAAQPTQPTAQPTQPAAQTDGKLAQIRAAGKLIVGTSADYPPYESIDENGNFVGFDMDLIRAVGEKLGVEVEIRDMPFDSLIASLQEGKIDAVIAAMQATAEREEKVDFTIPYRMTKDAFIGAGNTTITLNKPEDAAGLTIGAQTGTVQEGWIQKNLVATGLTPADKVFSYERADQAALDLASGRLQLVLMDAEPALELAKQNGLKVLLITEETAEGGKSIAIPEGASDLKAELDRIIQQLIDDGTVKQLQDKHGLP
>NC_009523.1|WP_011956539.1|2226013_2226664_-|amino-acid-ABC-transporter-permease
MEFVQDLLTTFNFIVQGLWVTISVTAVALTTGVVIGIVLAIARVYGHPSLQVAVTVYSVVIRAVPVIVIIFILFFVISRYVNLSPFWAGALALGFASGAYQTEIFRGALQAVQPGQMIAARAIGMSRLQAIQSVVLPQALRLALPAWGNEATLVLKDSTLVFAVGVPEILRRAQQVSARTFEPFLAFGVALLLYLALTMITTQALRWLERRYRLQM
>NC_009523.1|WP_157041278.1|2225229_2225970_-|ATP-binding-cassette-domain-containing-protein
MLRIEDVHKSYGNLQVLKGVSLTVQPQEVVVLVGPSGSGKSTLLRCINLLSPPTKGRIWLEDQDITAPGVNQDRVRQRIGMVFQEFNLFTHLTALGNVMIGLTKVRKMRKNEARDLAMFELERVGLADRAHYYPAQLSGGQKQRVAIARALGMDPHIMLFDEPTSALDPELTGEVLAVMQKLASEGMTMIVVSHEMGFARQVADRVVFMEGGVVVEEGPPQRMFEQAVHERTRAFLRTIEYMRHAP
>NC_009523.1|WP_011956537.1|2224524_2225199_-|amino-acid-ABC-transporter-permease
MNDIIDLLGKVTPDLLQGTVVTLQIAAVSLTLGMIIGLPVGVGRVYGPGWVQRILGAYVTLFQGTPLLIQLFMAYYGLPDIGITLGRLQAAFLTLGLNSAAYQAEYLRSALQSVSEGQMTAARALGMSKWQAIWSIILPQAVRLALPAWSNEAVAMLKYTSVVFLIAVPDLMGQAKILSSRYFAPIQIYLIVAVFYIVLVGITYLILTWIERRVRIPGLTGGTE
>NC_009523.1|WP_011956536.1|2222924_2224241_-|DUF362-domain-containing-protein
MQHEPRISRRQFLIAGIVAAHGLLIDHVQRTIGYAVRPSDAAPVVTARVYCPLIVVDKRDTPLTSTLSPAATPSPTATLSPTATPSPIATPSPTTTSVPLLRHHVVHTYSSRATFWNYSTGWYGDSVDARVVAAMVDEGVTRLTRTATRADAWAALLPHYQPGQRIGIKVNFNNADRNDNDNQIDALMDPINAIIAGLLAIGVAQQDIWIFDVSHGDRQGVIPLRFKRRCAYPDIQYASYADEHPELGFSTTEKIRFNAPPNAPIPDLAICNALVNLHYLINMPIMKRHVGAGISLGFKNHFGSIDRCNVLHNYTDIGARFYSSTYNPLVDINNHPQIRGKTVLTIGDGLFGDRINNLSVPQRWRTFGNAAPNSLFFSRDPVAIDCVMADFLRAESGETPSADDYLRLAAEAGLGVYERGDPWGSGYSRIVYERVNLT
>NC_009523.1|WP_011956535.1|2221995_2222802_-|molybdate-ABC-transporter-substrate-binding-protein
MYHRPALIVIIPLLVASACGALPFPSSPSGAAGDRELVVAAAADLTPAFNEIGMLFEEQTGIKVVFNFGSTGQLAQQIERGAPFDLFYAANESFIEALNDKGLVIADTMEIYAQGRITIWTRPDSPLQPTRVEDLRDPVYRRIAIANPEHAPYGQAAKEALERAGVWDAVQPRLVFGENVAQTLTLADTGNVDAAIVALSLSVQSNGKWNLIPAELHPDHPLLQMAAVVAGTQREAEARQFIAFVNSAQGHAIMKKYGFILPGEIVSR
>NC_009523.1|WP_011956534.1|2221321_2221999_-|molybdate-ABC-transporter-permease-subunit
MNWPAFWLSLQVNAIASVIILVAGLLIALMLVRTRFRGKILVETVIMLPLVLPPSVIGYYLLLAFGRGSPLFEWFNIRILFTWQAAVAASVVVGIPLMVQSSRAALANVDPVLENAARTLGASELRILWRVTLPLARRGILAGVILGSARALGEFGATLMITGNIPGRTQTLPVAIYDAVQAQRYADAHLMVLVMTGLAFAGLLLARQLEPAPQYRRADDAESSV
>NC_009523.1|WP_011956533.1|2220143_2221325_-|ABC-transporter-ATP-binding-protein
MTPQLTVDFIKRLGQTTLEMRFAAEAEILVLFGPSGAGKTQTLQAVAGLSTPDSGQIRFDDAIFFQRMPGKPVVNLPARKRRIGYVFQQYALFPHMSALENVAFPLGRRRDARDCAMELLERMHLAHLAHRMPHELSGGQQQRIAIARALATEPHILLLDESFSALDRPVRERLHEEIRMVQAERRLVVLYVTHNLDDAFAVGHRLAVVRDGRLEQIGRINDVFTRPANRHVLDILGIPNAMNAQVIETGPSGSLLDWDGIFLEAPPINAPLGAEITAYIRPEDIRLVYPDRSLSRMVIHNHLEGIVVERRLERHMYRLRVALPDGRPIEVIYPSSLYATMNLTPGERVRLALRKESIVVIAPRERVSPPIGTILSERVPDTGVIDPASSSLT
>NC_009523.1|WP_157041021.1|2219548_2220175_+|formylmethanofuran-dehydrogenase
MIMIETIPNNSLLDDILEHSAALHRHLCPRQVLGARMGILAGRLLGLELPQQNKRLYTFVETDGCFADGVGAATGCWLGRRTMRLIDHGKVAATFVDTRTRRAVRIRPHPQARTEARHYAPGAKSRWHAYLEAYRIMPDDVLLEAQWVELTLDLDRLISRPGARTVCHGCGEEIINEREVTLDGTILCRGCAFEEDRYVRSVTTMPDR
>NC_009523.1|WP_011956531.1|2218465_2219509_+|dehydrogenase
MESGELLEARQTLYRLLAHLYLHPPELSTLATLQTIPGLGDAAPETIDGLEQLQVEYEYIFGRNAYPYESLYVDHDLMLNTAAANRFAQLCQDCGFAEESPVGAPDHLGRQLGLMAYLLAIEISALREQNPALLTWARAHQHRCLSDHLAHWAPVFLGVVERVANHPLYRTVAQVTLELILNDLERSASLPLWIPLDERRVAPDPTPSPVQDEDAGALSAHTGDDSARDLNQIVRSLIIPNIAGMFISRYDISMLGRRLRIKAPIRERKQMMRDLFDVAARFDLVPTLLDHLDELFATEFWRLAVLTERYPAWTAHARHWLFRLEQSREMVRDLRAQYLTYQMQESQ
>NC_009523.1|WP_011956541.1|2228168_2229512_-|DUF4038-domain-containing-protein
MPLPRIRVSANRRFLMTEHGEPFFWLGDTAWELFHRLSLPEAEHYLDVRRQQGFNLIQAVALAELDGLHTPNANGHIPLAGDDPTRPNEFYFRHVDAIIRMAAEKGLYIGLLPTWGDKVHARLWGIGPVIFNTDNARIYGRFLGERYRNDPNIVWILGGDRPAEGYEAIWTAMAQGITEGLGFKPFFTYHPMGGMSSSTTLHTADWLDMNMLQSGHHLMDAPNWEMIRADYARTPVKPALDGEPNYEHHPVDPYTRLWKPEYGRFTDYDVRKQAYRSVFAGACGFTYGSHSVWQMYAPKHEPVNHPAPTWDEAIFAPGARQLIHLKNLMLSRPYFTRIPAPDLLPDVAPLSTHVEKDNRVNPFRAAHPVATRDSEGAYGLVYFPLAEQTLTVDLRPLRGHIRASWFDSRSGGTHPIGGYERNIVTFTSPIAGPDWVLILDAESMTQL
>NC_009523.1|WP_011956543.1|2231043_2231583_-|RNA-2'-phosphotransferase
MPDLVRTSKFLSLILRHKPERIGLTLDANGWADVDDLIRLANQHGFPLTLSLLERVVAENDKRRFTLSDDGRRIRANQGHSLKVDLQLSPSPPPHLLYHGTASRFLESIRAEGLRAGRRQHVHLSADIATARQVGQRHGKPVVLVVHAARMAAAGHRFYLSANGVWLTERVPVEFIEFP
>NC_009523.1|WP_011956544.1|2231839_2232589_+|SDR-family-oxidoreductase
MDFTDQVAIVVGGSGAIGAAVAAMLAERGALVVAGYCRNAAAAANVVARCRGMRGSVVARQVDARDPQSVDALVDTVAGEHGRLDIVVFCAGAMRLMPVETLGIAQWNETLMLHLDGAYHVCRAALRRMMRRRYGRIVNVAALHGLAGGPHQADFSAATGGMLGLTRTLAREAAPWNITVNAVAPGLIETPQLATIPEEMRAWGERVIALRRVGKPEEVAAAIVFLASPLASYITGQTLVVDGGWRMAP
>NC_009523.1|WP_011956546.1|2233743_2234667_-|hypothetical-protein
MSAQRAHYALGIVLLIVATIVAGITATATSATTEAEPFYNRLMLMAAQGDKRAQDFVRLVDALVTRQGSPGVVNERRVEHVTRIGDLQIEAVGLEPFYLKLYNNITFQSHEQIREYIAMREQALANVVSSNPSGTIEVSISLQEYTPLSDVLQLKRKYNLDIDEMTLHLFVDGERHSVLYVSDPTEPDDRRIVDFDASVDQFEEQLWQLLPAPVLEKKGIHAQNTSFKVSWLRGTLPATDASLLSDQQAIMLVDPISDILDTYKDRAVEVRVVQVPNLLAAIETVEGLSRLSPQLPQPTPTPLKDEK
>NC_009523.1|WP_041333394.1|2235557_2237033_-|phytoene-desaturase
MDLPIIIIGGGLGGLSAAIHLAARGRRVVLLEKNERVGGKLNLVEADGFLFDTGPSLLTMPWVLRSVFTAAGRRMEEALTITQLEPICRYRWPDGARFDAHQNLPRLIEEIERIEPADVSGFLRFLAYAERIYRAAEGPFLLRPFDGIRSLLTPELFTGTLQIDPFRTVDQAVSSFFRSRYLRQVFNRYASYNGSSPFRAPATFNLIPYVEFAQGAWHVSGGMYQIARALEQLARELGVEIRACTPVEHIEVSNNAATGVILAGGERLAASRVIVNADPRYAYATLLPGHEKTAARLAQLELSYSGFVLLLGINRIYPDLAHHNIFFSSDYRAEFAAIVDMQVPAPDPTIYVCAASVTDPRLAPPGHMNLFVLVNAPVLNPRVNWAREAQGYRNLILHKLERMGLENLSQHIVIEQIWTPETINQRYNAPGGSIYGLASNNPWTAFMRPPLRARDVRGVYFVGGGTHPGGGIPLVLLSGRAVAERVMADSA
>NC_009523.1|WP_011956549.1|2237299_2238844_+|hypothetical-protein
MNHASSSPSNKVGHSWYVRIRAIIGSRTVILALLAGQFALVQLLTGPQYGDAPRNMHWGVLTVENPAFLLGAPDTYERIKGFPPDPPSLAPLALYRFPQGGLHRWWGPVPPLVFALAWAMTRSYTALHLVVPLAGAGVVILTYWLAGLWLTRREALIAAAFLACFPLFRDYATVAYTEALSALALTAAVLAHVRGRTVATVILGSLAILMKLDLLLIYSGIIGISALWLMIARRLHREEFAVPFSGTHAVAALITPAMITSPWVWYHYLGQGERTPTGGLSLQQFSLVAPQMLELLFYIPWYGALLTLAVIGAVAASGARSGRFPAGILAVLLAWLGLGIVVLLVYAATPGSGNSPRVVIPALPPLALLFAAGITRLTIPWRRRVAFYLITLFTVINLVAIGYHAVEGARLREYAPVWQVLREQPRGYVLTEAYWHTILYARQPATWFEFDETFQRNIMENADHFARYLDRHPIRYVVLPAHGDALASPDVRAYLDQHATRIEAGEFVVYVVEG
>NC_009523.1|WP_011956550.1|2239291_2240155_-|alpha/beta-hydrolase
MDNYQHIWLNNTTLTYIDQGHGAPVVLVHGSGPTDLRTWERQIEPFAAHFRVIAYSRRCHYPNPPAGDHADSASTRTHARDLAALITALQLGRVHLIGFSFGADIVLRLAVDRPDLARTLTITEPPLHSWLAALPGGIDLLAQRAAAILPAKRAVQQGDLEHGARLFIDGMMGNGVFDQLPPSARQRIMDNARLIGAEPTEIDAMGAEDITRSEAATIQTPTLLLTGDASPPMFLLVSRELARYLPNVEQVQIRGASHLLHVMQPQAYNAVVLEFLTRHGGQGSSHV
>NC_009523.1|WP_011956551.1|2240421_2241063_-|ABC-transporter-permease
MRYLIDNFPYVLSLIGQHLVMSGLSLAIALVIALPLGIVCARVTRLRNLVLGILGVIYTIPSLSLFVLLIPFTGLGLRPAVIALVAYAQLVLVRNVVVGLTGIDPAIVEAARGMGMTAAQRLWRVELPLALPIILAGVRVAMLSIIAIGTIAAFINAGGLGLLLFDGVRSSNPEKIIAGAVAVSALAISANGILWLIEQRVFQATQGVTGTKN
>NC_009523.1|WP_011956552.1|2241046_2242027_-|ABC-transporter-ATP-binding-protein
MAFIIADRLTKTFPGETRPAVDQVSFEIKQGEFVVLLGPSGCGKTTLLKMINRLYEPTSGRLLIDGVDVRSMPATALRRRIGYVIQQTGLFPHLRIEQNIAVVPQLLRWDRARIEARIDELLDLVELPRSYRRRYPRQLSGGEQQRVGLARALAADPSLMLMDEPFGALDAITRARLQEELLRIQQRLHKTILFVTHDVDEALRLADRLLIMRAGRIVQFDTPLAVLAEPADDFVRDLLGADDVLRRLSLLTVADALASDGMNGDHTAHGSQETLNPGDNLREALIRMLRSGGQPLPVVDNGRQLGRISPDTIAAALTRKTHALPD
>NC_009523.1|WP_083763282.1|2242031_2242982_-|quaternary-ammonium-transporter
MVRSIRMLLAFTTLVGVLLAACSAPAQTTQPTAAPQPAPAEAAPVRIGSKNFTEAILVAEMYALALEDAGIRVERKFNLGATPVAHTALVNGEIDLYPEYTSTGLLEVLKQAPIADAKGILEAVRKGYEEQFKLTWLEPSPFNNTNALAMTRQRAEELGIRTYSDLVARSGELKLGGPPEFPEREDTKGLMAAYGFDPKFIGDNFVQLDTGALRYEALTKGDIDVVVAFGTDGQINGLGLALLEDDKNYYPIYQIAPVIRQDTLAANPAIAETLNKLAPLLTNDVMSGLNWQVDGPEKKEIADVARTFLQQQGFIK

Crispr_ID: NC_009523_41

• CRISPR_ID: NC_009523_41
• CRISPR_location: 2230854-2230945
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_41

Consensus_repeat	Method
GGCAAAGCCCGCCTGCGCGGGCTA	CRISPRCasFinder

spacers of NC_009523_41

>41.1|2230878|44|NC_009523|CRISPRCasFinder
GAGCGGAATAATTACTCAAAGACCATAAGCCCTCGGCTGTCCAG

CRISPR arrays and Neighbor proteins around NC_009523_41

CRISPR arrays

The CRISPR arrays of NC_009523_41

>merge|NC_009523|41|2230854-2230945|CRISPRCasFinder
GGCAAAGCCCGCCTGCGCGGGCTAGAGCGGAATAATTACTCAAAGACCATAAGCCCTCGGCTGTCCAGGGCGAAGCCCGCCTGCGCGGGCTA

>NC_009523|41|38|2230854-2230945|CRISPRCasFinder
GGCAAAGCCCGCCTGCGCGGGCTA	GAGCGGAATAATTACTCAAAGACCATAAGCCCTCGGCTGTCCAG
GGCGAAGCCCGCCTGCGCGGGCTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041333394.1|2235557_2237033_-|phytoene-desaturase	unknown	unknown	gnl|CDD|274273
NC_009523.1|WP_011956552.1|2241046_2242027_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224050
NC_009523.1|WP_157041021.1|2219548_2220175_+|formylmethanofuran-dehydrogenase	unknown	unknown	gnl|CDD|225102
NC_009523.1|WP_011956554.1|2243012_2243666_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224095
NC_009523.1|WP_011956551.1|2240421_2241063_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224095
NC_009523.1|WP_011956539.1|2226013_2226664_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NC_009523.1|WP_011956534.1|2221321_2221999_-|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226629
NC_009523.1|WP_011956541.1|2228168_2229512_-|DUF4038-domain-containing-protein	unknown	unknown	gnl|CDD|379072
NC_009523.1|WP_011956550.1|2239291_2240155_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_009523.1|WP_011956546.1|2233743_2234667_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_083763282.1|2242031_2242982_-|quaternary-ammonium-transporter	unknown	unknown	gnl|CDD|270332
NC_009523.1|WP_011956543.1|2231043_2231583_-|RNA-2'-phosphotransferase	unknown	unknown	gnl|CDD|179136
NC_009523.1|WP_157041278.1|2225229_2225970_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224051
NC_009523.1|WP_011956540.1|2226670_2227537_-|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|270248
NC_009523.1|WP_011956537.1|2224524_2225199_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NC_009523.1|WP_011956533.1|2220143_2221325_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NC_009523.1|WP_011956535.1|2221995_2222802_-|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270257
NC_009523.1|WP_011956544.1|2231839_2232589_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235500
NC_009523.1|WP_011956536.1|2222924_2224241_-|DUF362-domain-containing-protein	unknown	unknown	gnl|CDD|377193
NC_009523.1|WP_011956549.1|2237299_2238844_+|hypothetical-protein	unknown	unknown	gnl|CDD|224720

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_041333394.1|2235557_2237033_-|phytoene-desaturase	gnl|CDD|274273	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	5.01689e-153
NC_009523.1|WP_011956552.1|2241046_2242027_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	6.598e-146
NC_009523.1|WP_157041021.1|2219548_2220175_+|formylmethanofuran-dehydrogenase	gnl|CDD|225102	COG2191, COG2191, Formylmethanofuran dehydrogenase subunit E [Energy production and conversion].	3.6501e-48
NC_009523.1|WP_011956554.1|2243012_2243666_-|ABC-transporter-permease	gnl|CDD|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	4.21894e-62
NC_009523.1|WP_011956551.1|2240421_2241063_-|ABC-transporter-permease	gnl|CDD|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	6.05772e-66
NC_009523.1|WP_011956539.1|2226013_2226664_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.21599e-63
NC_009523.1|WP_011956534.1|2221321_2221999_-|molybdate-ABC-transporter-permease-subunit	gnl|CDD|226629	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism].	7.96412e-79
NC_009523.1|WP_011956541.1|2228168_2229512_-|DUF4038-domain-containing-protein	gnl|CDD|379072	pfam13204, DUF4038, Protein of unknown function (DUF4038). A family of putative cellulases.	3.38015e-168
NC_009523.1|WP_011956550.1|2239291_2240155_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.79372e-27
NC_009523.1|WP_083763282.1|2242031_2242982_-|quaternary-ammonium-transporter	gnl|CDD|270332	cd13614, PBP2_QAT_like, Substrate-binding domain of quaternary amine ABC-type transporter; the type 2 periplasmic-binding protein fold. This group includes the periplasmic substrate-binding component of a putative quaternary amine ABC transport system that is predicted to be involved in uptake of osmoprotectants (also termed compatible solutes) such as betaine, choline, proline betaine, carnitine, and L-proline. The relative substrate preference of this group is not known. To counteract the efflux of water, many microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.52796e-149
NC_009523.1|WP_011956543.1|2231043_2231583_-|RNA-2'-phosphotransferase	gnl|CDD|179136	PRK00819, PRK00819, RNA 2'-phosphotransferase; Reviewed.	2.14274e-90
NC_009523.1|WP_157041278.1|2225229_2225970_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.74755e-149
NC_009523.1|WP_011956540.1|2226670_2227537_-|transporter-substrate-binding-domain-containing-protein	gnl|CDD|270248	cd13530, PBP2_peptides_like, Peptide-binding protein and related homologs; type 2 periplasmic binding protein fold. This domain is found in solute binding proteins that serve as initial receptors in the ABC transport, signal transduction and channel gating. The PBP2 proteins share the same architecture as periplasmic binding proteins type 1, but have a different topology. They are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the family includes ionotropic glutamate receptors and unorthodox sensor proteins involved in signal transduction.	4.15404e-70
NC_009523.1|WP_011956537.1|2224524_2225199_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.15585e-70
NC_009523.1|WP_011956533.1|2220143_2221325_-|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.02068e-98
NC_009523.1|WP_011956535.1|2221995_2222802_-|molybdate-ABC-transporter-substrate-binding-protein	gnl|CDD|270257	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins that serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. In contrast to the structure of the two ModA homologs from Escherichia coli and Azotobacter vinelandii, where the oxygen atoms are tetrahedrally arranged around the metal center, the structure of Pyrococcus furiosus ModA/WtpA (PfModA) has shown that a binding site for molybdate and tungstate is where the central metal atom is in a hexacoordinate configuration. This octahedral geometry was rather unexpected. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.12754e-93
NC_009523.1|WP_011956544.1|2231839_2232589_+|SDR-family-oxidoreductase	gnl|CDD|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	3.80632e-82
NC_009523.1|WP_011956536.1|2222924_2224241_-|DUF362-domain-containing-protein	gnl|CDD|377193	pfam04015, DUF362, Domain of unknown function (DUF362). Domain that is sometimes present in iron-sulphur proteins.	2.77535e-11
NC_009523.1|WP_011956549.1|2237299_2238844_+|hypothetical-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.50184e-12

Protein sequences

>NC_009523.1|WP_011956541.1|2228168_2229512_-|DUF4038-domain-containing-protein
MPLPRIRVSANRRFLMTEHGEPFFWLGDTAWELFHRLSLPEAEHYLDVRRQQGFNLIQAVALAELDGLHTPNANGHIPLAGDDPTRPNEFYFRHVDAIIRMAAEKGLYIGLLPTWGDKVHARLWGIGPVIFNTDNARIYGRFLGERYRNDPNIVWILGGDRPAEGYEAIWTAMAQGITEGLGFKPFFTYHPMGGMSSSTTLHTADWLDMNMLQSGHHLMDAPNWEMIRADYARTPVKPALDGEPNYEHHPVDPYTRLWKPEYGRFTDYDVRKQAYRSVFAGACGFTYGSHSVWQMYAPKHEPVNHPAPTWDEAIFAPGARQLIHLKNLMLSRPYFTRIPAPDLLPDVAPLSTHVEKDNRVNPFRAAHPVATRDSEGAYGLVYFPLAEQTLTVDLRPLRGHIRASWFDSRSGGTHPIGGYERNIVTFTSPIAGPDWVLILDAESMTQL
>NC_009523.1|WP_011956540.1|2226670_2227537_-|transporter-substrate-binding-domain-containing-protein
MQKQTLIMLAFIAASLVMSACGGAPAAQPTQPAAQPTQPTAQPTQPAAQTDGKLAQIRAAGKLIVGTSADYPPYESIDENGNFVGFDMDLIRAVGEKLGVEVEIRDMPFDSLIASLQEGKIDAVIAAMQATAEREEKVDFTIPYRMTKDAFIGAGNTTITLNKPEDAAGLTIGAQTGTVQEGWIQKNLVATGLTPADKVFSYERADQAALDLASGRLQLVLMDAEPALELAKQNGLKVLLITEETAEGGKSIAIPEGASDLKAELDRIIQQLIDDGTVKQLQDKHGLP
>NC_009523.1|WP_011956539.1|2226013_2226664_-|amino-acid-ABC-transporter-permease
MEFVQDLLTTFNFIVQGLWVTISVTAVALTTGVVIGIVLAIARVYGHPSLQVAVTVYSVVIRAVPVIVIIFILFFVISRYVNLSPFWAGALALGFASGAYQTEIFRGALQAVQPGQMIAARAIGMSRLQAIQSVVLPQALRLALPAWGNEATLVLKDSTLVFAVGVPEILRRAQQVSARTFEPFLAFGVALLLYLALTMITTQALRWLERRYRLQM
>NC_009523.1|WP_157041278.1|2225229_2225970_-|ATP-binding-cassette-domain-containing-protein
MLRIEDVHKSYGNLQVLKGVSLTVQPQEVVVLVGPSGSGKSTLLRCINLLSPPTKGRIWLEDQDITAPGVNQDRVRQRIGMVFQEFNLFTHLTALGNVMIGLTKVRKMRKNEARDLAMFELERVGLADRAHYYPAQLSGGQKQRVAIARALGMDPHIMLFDEPTSALDPELTGEVLAVMQKLASEGMTMIVVSHEMGFARQVADRVVFMEGGVVVEEGPPQRMFEQAVHERTRAFLRTIEYMRHAP
>NC_009523.1|WP_011956537.1|2224524_2225199_-|amino-acid-ABC-transporter-permease
MNDIIDLLGKVTPDLLQGTVVTLQIAAVSLTLGMIIGLPVGVGRVYGPGWVQRILGAYVTLFQGTPLLIQLFMAYYGLPDIGITLGRLQAAFLTLGLNSAAYQAEYLRSALQSVSEGQMTAARALGMSKWQAIWSIILPQAVRLALPAWSNEAVAMLKYTSVVFLIAVPDLMGQAKILSSRYFAPIQIYLIVAVFYIVLVGITYLILTWIERRVRIPGLTGGTE
>NC_009523.1|WP_011956536.1|2222924_2224241_-|DUF362-domain-containing-protein
MQHEPRISRRQFLIAGIVAAHGLLIDHVQRTIGYAVRPSDAAPVVTARVYCPLIVVDKRDTPLTSTLSPAATPSPTATLSPTATPSPIATPSPTTTSVPLLRHHVVHTYSSRATFWNYSTGWYGDSVDARVVAAMVDEGVTRLTRTATRADAWAALLPHYQPGQRIGIKVNFNNADRNDNDNQIDALMDPINAIIAGLLAIGVAQQDIWIFDVSHGDRQGVIPLRFKRRCAYPDIQYASYADEHPELGFSTTEKIRFNAPPNAPIPDLAICNALVNLHYLINMPIMKRHVGAGISLGFKNHFGSIDRCNVLHNYTDIGARFYSSTYNPLVDINNHPQIRGKTVLTIGDGLFGDRINNLSVPQRWRTFGNAAPNSLFFSRDPVAIDCVMADFLRAESGETPSADDYLRLAAEAGLGVYERGDPWGSGYSRIVYERVNLT
>NC_009523.1|WP_011956535.1|2221995_2222802_-|molybdate-ABC-transporter-substrate-binding-protein
MYHRPALIVIIPLLVASACGALPFPSSPSGAAGDRELVVAAAADLTPAFNEIGMLFEEQTGIKVVFNFGSTGQLAQQIERGAPFDLFYAANESFIEALNDKGLVIADTMEIYAQGRITIWTRPDSPLQPTRVEDLRDPVYRRIAIANPEHAPYGQAAKEALERAGVWDAVQPRLVFGENVAQTLTLADTGNVDAAIVALSLSVQSNGKWNLIPAELHPDHPLLQMAAVVAGTQREAEARQFIAFVNSAQGHAIMKKYGFILPGEIVSR
>NC_009523.1|WP_011956534.1|2221321_2221999_-|molybdate-ABC-transporter-permease-subunit
MNWPAFWLSLQVNAIASVIILVAGLLIALMLVRTRFRGKILVETVIMLPLVLPPSVIGYYLLLAFGRGSPLFEWFNIRILFTWQAAVAASVVVGIPLMVQSSRAALANVDPVLENAARTLGASELRILWRVTLPLARRGILAGVILGSARALGEFGATLMITGNIPGRTQTLPVAIYDAVQAQRYADAHLMVLVMTGLAFAGLLLARQLEPAPQYRRADDAESSV
>NC_009523.1|WP_011956533.1|2220143_2221325_-|ABC-transporter-ATP-binding-protein
MTPQLTVDFIKRLGQTTLEMRFAAEAEILVLFGPSGAGKTQTLQAVAGLSTPDSGQIRFDDAIFFQRMPGKPVVNLPARKRRIGYVFQQYALFPHMSALENVAFPLGRRRDARDCAMELLERMHLAHLAHRMPHELSGGQQQRIAIARALATEPHILLLDESFSALDRPVRERLHEEIRMVQAERRLVVLYVTHNLDDAFAVGHRLAVVRDGRLEQIGRINDVFTRPANRHVLDILGIPNAMNAQVIETGPSGSLLDWDGIFLEAPPINAPLGAEITAYIRPEDIRLVYPDRSLSRMVIHNHLEGIVVERRLERHMYRLRVALPDGRPIEVIYPSSLYATMNLTPGERVRLALRKESIVVIAPRERVSPPIGTILSERVPDTGVIDPASSSLT
>NC_009523.1|WP_157041021.1|2219548_2220175_+|formylmethanofuran-dehydrogenase
MIMIETIPNNSLLDDILEHSAALHRHLCPRQVLGARMGILAGRLLGLELPQQNKRLYTFVETDGCFADGVGAATGCWLGRRTMRLIDHGKVAATFVDTRTRRAVRIRPHPQARTEARHYAPGAKSRWHAYLEAYRIMPDDVLLEAQWVELTLDLDRLISRPGARTVCHGCGEEIINEREVTLDGTILCRGCAFEEDRYVRSVTTMPDR
>NC_009523.1|WP_011956543.1|2231043_2231583_-|RNA-2'-phosphotransferase
MPDLVRTSKFLSLILRHKPERIGLTLDANGWADVDDLIRLANQHGFPLTLSLLERVVAENDKRRFTLSDDGRRIRANQGHSLKVDLQLSPSPPPHLLYHGTASRFLESIRAEGLRAGRRQHVHLSADIATARQVGQRHGKPVVLVVHAARMAAAGHRFYLSANGVWLTERVPVEFIEFP
>NC_009523.1|WP_011956544.1|2231839_2232589_+|SDR-family-oxidoreductase
MDFTDQVAIVVGGSGAIGAAVAAMLAERGALVVAGYCRNAAAAANVVARCRGMRGSVVARQVDARDPQSVDALVDTVAGEHGRLDIVVFCAGAMRLMPVETLGIAQWNETLMLHLDGAYHVCRAALRRMMRRRYGRIVNVAALHGLAGGPHQADFSAATGGMLGLTRTLAREAAPWNITVNAVAPGLIETPQLATIPEEMRAWGERVIALRRVGKPEEVAAAIVFLASPLASYITGQTLVVDGGWRMAP
>NC_009523.1|WP_011956546.1|2233743_2234667_-|hypothetical-protein
MSAQRAHYALGIVLLIVATIVAGITATATSATTEAEPFYNRLMLMAAQGDKRAQDFVRLVDALVTRQGSPGVVNERRVEHVTRIGDLQIEAVGLEPFYLKLYNNITFQSHEQIREYIAMREQALANVVSSNPSGTIEVSISLQEYTPLSDVLQLKRKYNLDIDEMTLHLFVDGERHSVLYVSDPTEPDDRRIVDFDASVDQFEEQLWQLLPAPVLEKKGIHAQNTSFKVSWLRGTLPATDASLLSDQQAIMLVDPISDILDTYKDRAVEVRVVQVPNLLAAIETVEGLSRLSPQLPQPTPTPLKDEK
>NC_009523.1|WP_041333394.1|2235557_2237033_-|phytoene-desaturase
MDLPIIIIGGGLGGLSAAIHLAARGRRVVLLEKNERVGGKLNLVEADGFLFDTGPSLLTMPWVLRSVFTAAGRRMEEALTITQLEPICRYRWPDGARFDAHQNLPRLIEEIERIEPADVSGFLRFLAYAERIYRAAEGPFLLRPFDGIRSLLTPELFTGTLQIDPFRTVDQAVSSFFRSRYLRQVFNRYASYNGSSPFRAPATFNLIPYVEFAQGAWHVSGGMYQIARALEQLARELGVEIRACTPVEHIEVSNNAATGVILAGGERLAASRVIVNADPRYAYATLLPGHEKTAARLAQLELSYSGFVLLLGINRIYPDLAHHNIFFSSDYRAEFAAIVDMQVPAPDPTIYVCAASVTDPRLAPPGHMNLFVLVNAPVLNPRVNWAREAQGYRNLILHKLERMGLENLSQHIVIEQIWTPETINQRYNAPGGSIYGLASNNPWTAFMRPPLRARDVRGVYFVGGGTHPGGGIPLVLLSGRAVAERVMADSA
>NC_009523.1|WP_011956549.1|2237299_2238844_+|hypothetical-protein
MNHASSSPSNKVGHSWYVRIRAIIGSRTVILALLAGQFALVQLLTGPQYGDAPRNMHWGVLTVENPAFLLGAPDTYERIKGFPPDPPSLAPLALYRFPQGGLHRWWGPVPPLVFALAWAMTRSYTALHLVVPLAGAGVVILTYWLAGLWLTRREALIAAAFLACFPLFRDYATVAYTEALSALALTAAVLAHVRGRTVATVILGSLAILMKLDLLLIYSGIIGISALWLMIARRLHREEFAVPFSGTHAVAALITPAMITSPWVWYHYLGQGERTPTGGLSLQQFSLVAPQMLELLFYIPWYGALLTLAVIGAVAASGARSGRFPAGILAVLLAWLGLGIVVLLVYAATPGSGNSPRVVIPALPPLALLFAAGITRLTIPWRRRVAFYLITLFTVINLVAIGYHAVEGARLREYAPVWQVLREQPRGYVLTEAYWHTILYARQPATWFEFDETFQRNIMENADHFARYLDRHPIRYVVLPAHGDALASPDVRAYLDQHATRIEAGEFVVYVVEG
>NC_009523.1|WP_011956550.1|2239291_2240155_-|alpha/beta-hydrolase
MDNYQHIWLNNTTLTYIDQGHGAPVVLVHGSGPTDLRTWERQIEPFAAHFRVIAYSRRCHYPNPPAGDHADSASTRTHARDLAALITALQLGRVHLIGFSFGADIVLRLAVDRPDLARTLTITEPPLHSWLAALPGGIDLLAQRAAAILPAKRAVQQGDLEHGARLFIDGMMGNGVFDQLPPSARQRIMDNARLIGAEPTEIDAMGAEDITRSEAATIQTPTLLLTGDASPPMFLLVSRELARYLPNVEQVQIRGASHLLHVMQPQAYNAVVLEFLTRHGGQGSSHV
>NC_009523.1|WP_011956551.1|2240421_2241063_-|ABC-transporter-permease
MRYLIDNFPYVLSLIGQHLVMSGLSLAIALVIALPLGIVCARVTRLRNLVLGILGVIYTIPSLSLFVLLIPFTGLGLRPAVIALVAYAQLVLVRNVVVGLTGIDPAIVEAARGMGMTAAQRLWRVELPLALPIILAGVRVAMLSIIAIGTIAAFINAGGLGLLLFDGVRSSNPEKIIAGAVAVSALAISANGILWLIEQRVFQATQGVTGTKN
>NC_009523.1|WP_011956552.1|2241046_2242027_-|ABC-transporter-ATP-binding-protein
MAFIIADRLTKTFPGETRPAVDQVSFEIKQGEFVVLLGPSGCGKTTLLKMINRLYEPTSGRLLIDGVDVRSMPATALRRRIGYVIQQTGLFPHLRIEQNIAVVPQLLRWDRARIEARIDELLDLVELPRSYRRRYPRQLSGGEQQRVGLARALAADPSLMLMDEPFGALDAITRARLQEELLRIQQRLHKTILFVTHDVDEALRLADRLLIMRAGRIVQFDTPLAVLAEPADDFVRDLLGADDVLRRLSLLTVADALASDGMNGDHTAHGSQETLNPGDNLREALIRMLRSGGQPLPVVDNGRQLGRISPDTIAAALTRKTHALPD
>NC_009523.1|WP_083763282.1|2242031_2242982_-|quaternary-ammonium-transporter
MVRSIRMLLAFTTLVGVLLAACSAPAQTTQPTAAPQPAPAEAAPVRIGSKNFTEAILVAEMYALALEDAGIRVERKFNLGATPVAHTALVNGEIDLYPEYTSTGLLEVLKQAPIADAKGILEAVRKGYEEQFKLTWLEPSPFNNTNALAMTRQRAEELGIRTYSDLVARSGELKLGGPPEFPEREDTKGLMAAYGFDPKFIGDNFVQLDTGALRYEALTKGDIDVVVAFGTDGQINGLGLALLEDDKNYYPIYQIAPVIRQDTLAANPAIAETLNKLAPLLTNDVMSGLNWQVDGPEKKEIADVARTFLQQQGFIK
>NC_009523.1|WP_011956554.1|2243012_2243666_-|ABC-transporter-permease
MISLLFEAYQYFLANQSRFWAATTQHLWISSVALAISTVAGLPIGIWAAHQVRIGQWAINAFGALRLVPSLAILFLMQPYLGIGALPALVALTLLAIPPILIATYAGIRAVDGGVRDAARGMGMTAAQILWRVELPLALPSIVGGVRTAAVEVIASATLAAFIGGGGLGIFITRGYALFDTRIMLVGAIPVALLALAAELMLGWTQRRLASNLGAAT

Crispr_ID: NC_009523_42

• CRISPR_ID: NC_009523_42
• CRISPR_location: 2306973-2307084
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csx3,csx1,cas10,csx10gr5,csm3gr7,csx19,cas8b2,cas7,cas5,cas3,cas6,cas1,cas2,cas4

Consensus repeat of NC_009523_42

Consensus_repeat	Method
GTGAAATTGCGACGGCGGGGGTGTCTTATCTGAGAAAG	CRISPRCasFinder

spacers of NC_009523_42

>42.1|2307011|36|NC_009523|CRISPRCasFinder
CTACCACTGACACATTCACCCCTAGCGGCGATGTGC

CRISPR arrays and Neighbor proteins around NC_009523_42

CRISPR arrays

The CRISPR arrays of NC_009523_42

>merge|NC_009523|42|2306973-2307084|CRISPRCasFinder
GTGAAATTGCGACGGCGGGGGTGTCTTATCTGAGAAAGCTACCACTGACACATTCACCCCTAGCGGCGATGTGCGTGAAATTGCGACGGCGGGGGTGTCTTATCTGAGAAAG

>NC_009523|42|39|2306973-2307084|CRISPRCasFinder
GTGAAATTGCGACGGCGGGGGTGTCTTATCTGAGAAAG	CTACCACTGACACATTCACCCCTAGCGGCGATGTGC
GTGAAATTGCGACGGCGGGGGTGTCTTATCTGAGAAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956592.1|2291999_2294138_-|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274902
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl|CDD|273040
NC_009523.1|WP_011956599.1|2304702_2305596_-|histidine-kinase	csx1	pfam09623_csx1_CAS-III	gnl|CDD|370585
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl|CDD|337605
NC_009523.1|WP_011956594.1|2296279_2296867_-|hypothetical-protein	csx19	mkCas0167_csx19_CAS-III-D	gnl|CDD|274900
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl|CDD|273860
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	gnl|CDD|187796
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl|CDD|274215
NC_009523.1|WP_011956598.1|2302771_2304529_-|hypothetical-protein	csx1	cd09747_csx1_CAS-III	gnl|CDD|187878
NC_009523.1|WP_011956593.1|2294142_2296278_-|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|274902
NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514
NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011956597.1|2301112_2302750_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl|CDD|187810
NC_009523.1|WP_157041280.1|2291807_2291966_-|hypothetical-protein	csx1	cd09732_csx1_CAS-III	gnl|CDD|187863
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	csx3	mkCas0115_csx3_CAS-I:CAS-III	gnl|CDD|187871
NC_009523.1|WP_011956596.1|2298650_2301116_-|hypothetical-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	gnl|CDD|187831
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|273707
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|378256
NC_009523.1|WP_011956595.1|2296863_2298648_-|hypothetical-protein	csm3gr7	cd09683_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187814

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011956592.1|2291999_2294138_-|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	3.7e-179	592.4	0.2
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	5.7e-34	112.6	0.1
NC_009523.1|WP_011956599.1|2304702_2305596_-|histidine-kinase	csx1	pfam09623_csx1_CAS-III	2.7e-58	192.0	0.1
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	3.4e-83	274.2	0.0
NC_009523.1|WP_011956594.1|2296279_2296867_-|hypothetical-protein	csx19	mkCas0167_csx19_CAS-III-D	2.7e-102	334.7	4.6
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	5.5e-15	50.3	0.1
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	4.1e-255	841.6	0.2
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	8.3e-53	174.2	0.0
NC_009523.1|WP_011956598.1|2302771_2304529_-|hypothetical-protein	csx1	cd09747_csx1_CAS-III	3.3e-23	76.8	0.0
NC_009523.1|WP_011956593.1|2294142_2296278_-|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	8.4e-186	614.4	0.0
NC_009523.1|WP_011956597.1|2301112_2302750_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	2.4e-58	192.8	0.0
NC_009523.1|WP_157041280.1|2291807_2291966_-|hypothetical-protein	csx1	cd09732_csx1_CAS-III	1.3e-13	45.8	0.0
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	2.6e-83	274.4	0.0
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	csx3	mkCas0115_csx3_CAS-I:CAS-III	3.2e-68	224.4	0.0
NC_009523.1|WP_011956596.1|2298650_2301116_-|hypothetical-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	1.9e-29	97.7	0.1
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	1.6e-70	233.0	0.0
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	6.5e-20	66.0	0.0
NC_009523.1|WP_011956595.1|2296863_2298648_-|hypothetical-protein	csm3gr7	cd09683_csm3gr7_CAS-III-A:CAS-III-D	8.2e-46	150.9	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956592.1|2291999_2294138_-|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl|CDD|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	0
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	7.68934e-34
NC_009523.1|WP_011956599.1|2304702_2305596_-|histidine-kinase	gnl|CDD|370585	pfam09623, Cas_NE0113, CRISPR-associated protein NE0113 (Cas_NE0113). Members of this minor CRISPR-associated (Cas) protein family are encoded in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.	1.03099e-68
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	0.000474164
NC_009523.1|WP_011956594.1|2296279_2296867_-|hypothetical-protein	gnl|CDD|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	0.000405984
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	2.81484e-28
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl|CDD|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.52405e-13
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	2.16806e-51
NC_009523.1|WP_011956598.1|2302771_2304529_-|hypothetical-protein	gnl|CDD|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	1.21205e-18
NC_009523.1|WP_011956593.1|2294142_2296278_-|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl|CDD|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	0
NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.592e-16
NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011956597.1|2301112_2302750_-|hypothetical-protein	gnl|CDD|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.0215e-09
NC_009523.1|WP_157041280.1|2291807_2291966_-|hypothetical-protein	gnl|CDD|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	6.91893e-12
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	6.1165e-97
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	gnl|CDD|187871	cd09740, Csx3_III-U, CRISPR/Cas system-associated protein Csx3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small protein in some cases fused to Csx1 (COG1517) family domains.	5.42096e-10
NC_009523.1|WP_011956596.1|2298650_2301116_-|hypothetical-protein	gnl|CDD|187831	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains.	6.02273e-19
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	4.05375e-71
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	1.70251e-14
NC_009523.1|WP_011956595.1|2296863_2298648_-|hypothetical-protein	gnl|CDD|187814	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.90712e-25

Protein sequences

>NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein
MNPFPAVVIGGPPHSGKSVLTYLLTRQLRALRVEHYVLRACPDGEGDWSQEAPPERVRLLRQKGQFSQDFVDRVCRDLAQRHLPLIVDVGGKPTPDQERILDQCTHAVLISANEAGLKEWRDRFERHGLPIIAELHSVLIGEDCIEAEIPVLRGQIANLERFTGVGGLMVEALAQQLQCLMTYTDADLKTYHCSHAPTELVVDVDHLAWWVELPEQQHWLPAYLARALTYAPKGTPLSIYGRGPNWLYAALALHAAPHQVYLFDPRMGWVAPVTLHCTPAATADAVAWKIEPFPTHTWIELTPTQPYLDYDDVNGTALPALDPSHGVVLSGKLPFWLLLGAALAYCHHPWLGIVQAQQYDECIVVMSRDAAYQPGACFRFRTDPHHGTTIGSMTQER
>NC_009523.1|WP_011956599.1|2304702_2305596_-|histidine-kinase
MTDTNSELAHTTTLVATLGGQPQIVTFALDALLARGEPITDVYLIHLSLTNPRTRQALSRLQQEFPNDYYAHTNRRCRLRRAPVGVNGVELTDIRTAADAEVAWQSIRTLIADLKNEGRRLHLCLSGGRRMLALLAMSAAALLCDHQDRIWHMHTPEETLQRVKDGALMHVDPSDGVQLIQTPIVPWGACFPALRALALTSMQAVQEQLQRFAAIDEPQCRQVWERLSPRQRDVLRALAKGMRPDEAATHLNITLNTVNTHKTAILSECRVAWNLPDNAPLDYRFLRERFAGFLERV
>NC_009523.1|WP_011956598.1|2302771_2304529_-|hypothetical-protein
MTTRLTKQGLKERTQEYWKEKPGFEVYINELLGRELQAISQPNGSTRVRGAGKPVHTLALTVGESFEPLLQVICVLRPRRVVLILNQFYSGTPGYDHGRELQDLIEKLPHVPDLPQDVRPEVQDVELIELKNDSPTQVFRALLDTMRKPEAQPPDGHVNVVDITGAKKSMVVGAFLYAAHSGLPITYVDFDEYDKDWGKPYGYTCRIGEIANPYEAFRLRDWEQVRRLYESYNFRSARALLGQAGNSGTSGSGILGAMSQTIDNADDGETLYDQRDINKVQRLATLFEMYEAWENGDYTHARAIADGLTPPLPDDAIPWSVVELGDVWPSAAHISNARSAADSLLKAHMALKQGTSHPSDSLFTHPTKLLAYVRDELAKIERLIDKNEDYRSAYLRAAGLHEFLLKARLALCWLHNALEAKPKGGSTWQSVATAFGNTERDAFASLMDESSEGKFRRALQNQEEMNVRGGNVRRSSTAPSLQPYYDNLSLDLAGAVYTDASGNTTPLFVKLRGEAIHTHLYIPRNVAEAALELVQAAVKEFETNWLEHFHPGICAQAEGKRVESPSWSRLCEICELDFLPPRLRE
>NC_009523.1|WP_011956597.1|2301112_2302750_-|hypothetical-protein
MPYLLAAEADKIQDFIFRSSRLREVVGASQLLTRFCRSIDDTLAKKHGGQVVVNDGGSFRVIFDDLAKARAFGADLAELYRLALGGSLTVAEPVRLDGDFRKANEQAGERLRWAKSRRQGAIAEVHMPYVAFCASCGVALARKRERLTGRRATNRSSYICEACRAKAAERDRKPRAILDELYEAYCTSLGTQPTINLDWPEDADDIARLDLRQRNYVAYLVADGNGMGRTFGMCGQEQLTKLSEGLSPILQDSLAAAAASFRNVVSEQAHMIPMIPLILGGDDLFALIPAPYALDFTRRFCLEWERRMKKLADEIGLTDLPRPTVAAAVVICKGTYPYALAHRRAEALLKEAKRQSKLLAAETGEHLSAVNFEVILGNRLAGQEDDDAEHSRIVRLTLRPYWVCDGDLSQNAKERGLEIKTLLDQRLTLKDIPSKRLAELRRCFEDVPTSITIRDRNQTMQTWTNRQLDNVLQRLSTTSRAKLETALTTLGKSRNDSNSDHHWREIRRGDATPFAHGMLDLLESWDFAQDLEYRPDDYEPQEEEA
>NC_009523.1|WP_011956596.1|2298650_2301116_-|hypothetical-protein
MSIRLEFDIAFKSDYHVSAGHGLGLQVDSALLRDPDNVPVIRGTVLAGLLRESLANLLSLDPFAGEQRCQASGGDASKPVYCGQFATNHGSECPVCTIFGSTGRRKRWRIASARPAGLTTPQTSSREWRAGETAAQITTRVRVNPRTRRAEENKLFTREEGDGSLHFRFIAECMDESEDAWREAEWLVAAARLLRNLGAGKRRGYGECEIHLADLSQENRLLQRLEQRLKNEPVASAGAAQRANIQPLTLPADPGQHTYRLQVLVRLDEPLLVARRAEAGNQFETLETIPGAVLRGALAWRIAQHLGAQLEDHSSTAYRNFVNLFFHDTVRFSMLLSVEIQREKSGYPTIVAPRDLFTCELYRGYGTQSQDQGRAQSKEGHGVWSLLQDNAPQECPICAQPDAVSGRQAASVKLETLSGFISLVKDAPRSKHKPKQTVEMHIRIDPKSGRVRTGDLFGYVALEPGQYFLGEITCSNEQTWKTLQTMANLRPNGDVNELTLGKAGQRGYGEVSAVFRPQSTPHLHFSSVQKRVSTTERITLLLLSDAIVPDPWGRFWRGFDADWLKQELKLPKGANVAIDRNQHGELLAFSTTRAVDAFNAKLGLPRARDIAIVAGSSVRLTFTGIALRDLLSLLEAAEAQGIGLRRDEGFGRVAFNHPIYQQLDRQLLDVQTTAAELAPLALSNAHTAHFSARVLQFWLEWARKLDEEFQTELIRDGRFEAVARLLFTSQQTSLEAIKSDLQRMGRQDTLLSAPLSGRDKPNFFETDGKQGLEMIQRMLDALATLLKENELEQEAQAWCVGLRLLADRIAGPARQKAMERR
>NC_009523.1|WP_011956595.1|2296863_2298648_-|hypothetical-protein
MTFRAVTATLRLRTALHIGTGQDSETTDDLLRRDARGRLLIPGTAIAGALRSLATRLAPRFRGEQLCQALKGPMTNQACQCLVCRLFGDVNPSEENEEASAARVLVYDAVLADVPGLQIRDGVGIDRVTGAAARRERIKFDYEVLPAGTIFKLRLEIDPRLPDEEKTLPLLASVLAEWEQGRGVVGGRVGRGLGAFDLTDVQWIERDLNQPNVLIDFLRNGPPWDTTDGDRNWLRKQVEDARQRVTTNHRDLSAVARSWALAEFTLAATGPFLTHDLMQAGRSGFDHAPLLATYDRGAKPVLPGSGLRGVLRSQAERIARTLATLKAWDDGHDSQTRKEKFLTTCPACNPLTTRTDDPVASCNSFIKTLPRAERTTLEHEGADDKLCLACQLFGSPWNGSRLRVEDAPFVGEKVELKALDFLAIDRFTGGGRDTAKFDAVVLWKPKFRVRLFLENPEPWELGWLALVLRDLHDGLTTVGFGAAKGFGRCVIESPRLTFGILHDDDFPLPDSNTHNQAVVAGRRLLQSKNGFSGIYHTLVYEQATNELKTLAEGWVRAFNNLVDEHRHRFTLQRDSYFEQVNGSWLSDLYPARVS
>NC_009523.1|WP_011956594.1|2296279_2296867_-|hypothetical-protein
MSDNSINFDQLIEKMQKAQVTDADRPTILGGQFAADRLTDFLKTWQNQWSQMPFRLWEHVSHIEFADAPGEPEFLQRAEIFGKGGHLSLRRDAGRWLWHYVGEKINVSVDDFGAKDFWAAHPGCTLRRYEESVILWGERKEGHKLWFDDRVAAARLDYPVNAHGRVYLHFWRYTENGQTAFVWYRELSNQPLQEH
>NC_009523.1|WP_011956593.1|2294142_2296278_-|TIGR03986-family-CRISPR-associated-RAMP-protein
MGKAKPKRKMASHSSQRGYRFLNPYNFVRTLEVRHLHAAPLLGRCAPPPHDRYVGLTGRIRCCLTATTPIFVSDSEGIKEDTVNSKVHRHYRFFRDPNGNVAIPGTSLRGAVRSIFEAVTNSCFAHFAGEKRLSYHLPAGDASKLIPARVRITEQQEWVLDLLPGTKKNPLDGLEPDDRMYAAWIKRYAPLRSSPTEQANPGSPYARRTKVSLPQSKGHGDKCWALIEEMEHPPRRVRGREQGYFLFWNVIQLASQKDDLPSPKKGQKIVEGYLCLTNQNIENKHDERFFFAEHQVTSIQLPADVRKHYEELIADYQERHSDAVRKRQHPDQPQGGEPAFSRFILERTGRNEAKLRDGDLVYAMLESASGGYRVKFIVPVSVPRVGFERKIGDLLHPSDLAKCEDYDRLCPACRTFGWVWGDDLEQQRPELSKPTACAGRVRFSHARLTHDAGTFDATLAILSTPKPTTYRFYLRPRSGKPQDGLCDQQVGYDNPAQILRGRKVYRHHGSRLDPQEYQSVNGNKSDQNRTVHGVQKAGSRFEFTVEFENLAPVELGALLWSLRLEGWHHRIGYAKPLGFGSARIEVLSVSILNPEVRYASLSDTADGWIDRTDQIDVWIDNFKRAMAARYGAAFDQLANIRDLKALLADTPPLPVHYPRPTRQPQAQGKQYEWFVGNKRGGQSPAPRLALSLADDDQTGLPLIDKDGNVVE
>NC_009523.1|WP_011956592.1|2291999_2294138_-|TIGR03986-family-CRISPR-associated-RAMP-protein
MAKHKGKPNNQNRQRQKEAAQKFRLPEVAKSGHTREHQRQEAVSKQAQAVKAQKTLKIPWPAPRQPTETRENYRFLNPYNFVRYLPEPAIPPGDVDAQLLGRCAPPPHDRYIGLTGRIVCTLEAVTPLFISDSHDINVTTTLRDGREVQYKSYRFFQYEGRDAIPAASLRGMIRSTFEAVTNSPFGVFNGDERLEYRIDPAEARRFRPGIVESLPNGDQPGVILLCEEAKIGAYYEDRKLNVLKGNWRCGEEAYAIITKNNTAKVKALARRPEDLPADGEIYHGWVKVTGQTIETKRNESFFYFKHGDRTKAQRVYFDVEREADFNAVLHAQLYERRENFHSQVQSERLEPNNLVYVELEPEDAGRVRNIALARVARLRYRNAIGNLLPDHLKPGEDYEHLDIASRVFGWVKATPTEDYKVRIAYAGRVRFSHAVLTEDGDKGVYDGEMPLAILGSPKPTTTLFYLRKREGEWSEAERKQPGAATTIGYDGPNILRGRKFYRHHGKALNRLEYERAGRRQDHQNRTVRGVRAPGNVFEFTIDFHNLAPVELGALLWTLNLSDNEQCFFRLGYAKPLGFGSVRLSVVQVELLDPGTRYRSLQTSGWRTATFSERSRWLERFATAMRRCYGKPLYELPNIVDLIKLLRGPEKGQPQHIHYPRTNLQPDPDGKNFEWFVANKAKSTKVDQAGPNLTLEMPDVEKGLVLLEKDRQA
>NC_009523.1|WP_157041280.1|2291807_2291966_-|hypothetical-protein
MQLKGGYYGNFEARDQSVTPNQTPVIDLTHFVDLLDWTVGADHFVRFEDASE
>NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MITYTGHPFVDTGFAVITAFVRKRRFADLADDDFQQIADYIEANYVRQPLRSFLTVAFTSNAWFAQSAFNPDRPDLSPEKQTEAREKRQYWADRHLRQWQQSAAALETCLFTGLPAAGLELSQKLQPGRVGRAQMPLLQGDDAINFFINGDPGLPMAAEAILALQAMPLGCAKVGGGLLAVHCDDEALTIAFATRFLQRNLNDVAKAQAAGEKKLPGSPRSLKTLLVETLTEILIRQIQEEERRARRPAITAYYFNNGQSPFLEIYHLPLQITGFLLAVHTPAYRAIWNELVQRGWQRAGISGKQGKAVDPVEPHFNYLYEDLFTLPAQAARFVRTYFLRIPDLRRSADDPRREYSPRREADLVSWPLVELFAQEVLLMTDDRVTKLKELGDKLADYTRYQGGKRFFRQFFVEQRSDNFLSLLNKANIDYTRYKRGQETLFDLDSFLTIFMEGDEVLRKDWRLMRDLVLIRMVEQLRDWIAGNPDAIPAEEEVAANE
>NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAFVTGLLLIDAPASALNNLGSIPGEREENTVGVKMITTKTGNFPYVSAQAFRYWLRTTLEQRVPEWRASPIFREEKIAYTDANPIRYWDDDLFGYMRAPGKADTARKSREQISLLEDATPVKETVTRASPFRVSTLVSIAPVNPTSDFGVMSRHEGNPVPHEHQFYRATLKGLFSLDLWACGTFSYRNRTGFRNLDDERVRLVADVSGVEHLKDEQSYRLPKDQRIARVKALFSGLAQLEGGAKQTLHYTDVSPALVIFAVTDGGNHIFHHTVGANRSGLPEIKIDALREALRVFADSIRSPVYVGWVRGYLDEARAGFEQFVAEHNAVAAKEGLPVITVSHPREAFMAFVAACDEHPEWLD
>NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5
MQALKIVLEGVTTSFRYPHFMLGVQPGFPLPPPATIYGHVCSALGEWFDPEGVAFAYHFTVAGEGYDLEHIHVLSASSGKLPGGERKALEGNINPFKRQILLFPRLTLYLNRPEWIDAFRRPRYPVVLGRSQDLASYTRIEIVELQPAEQVYFEHTLLPYSMAAQAPAGVVTLMPRWIDYRQRRRPGFARYLMLTERITTKHMLRFGQQTPVYWSDPTVPMVDGLPLGLWFHTFVGADNETLTVA
>NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3
MKPLPWPDWMDHLLAKSKRYGGETLAGHTWDVLCRLADLYRLRPHLTDDTRLWHCLYWSAFLHDFGKAAQGFQRRLRGGPKWAHRHEVLSLAFVDAIAHDLNEAEQRWVVAAIVSHHRDATEIAELYPSGLRRDPLIDLCNELDAETVAHLLRWIAECANRWRDLLGLTADVGAIDPQPCSVGAQRVRYWLRMYHDWVDTLDGEGSDARRPGILLRGLITSADHMASAHLRRLPPPIRLSWQDVAMRCNLSPDQVYPHQRQSAGQSAQSALLMVPTGSGKTEAALSWALGDGRNPPARIFYTLPYQASMNAMYDRLRQTFGDDVVGLQHGRATQALYARFREGDEWSATAARRAQWEKNLNLLHARPLKVLSPYQLLKALFQLRGFEAMLTDYAHAAFIFDEIHAYEPERLALITGLMRYLREHFAARFFVMSATFPELIRSHLRTALGDTPLIRATPDIFDRFRRHQLCLRDGELTDPATITEIVEAVRNGKQVLVCANTVARAQMVRDLLTHAGLTDEHLILIHSRFTYGDRSRLEQAIGARCRSNSANRSPLALVATQVVEVSLDIDLDVLYSDPAPLEALLQRFGRVNRKAAKGICPVYVFRQPDDGQGVYGRDRDPERSGRIVRVTLAELEQHDGAIIDEATINEWLDRIYADPLLNQQWRDAYQRMAHQVDLIIQGIRPFQSDEQREDEFERMFDGVDVVPQCFERDYVHLLVEERFIEANDYLVSISKQRFAILRNQGKLRPAEETDQRRVWVAQTPYDARNGLSFGDRVVDMDWI
>NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSLLTHHLQFTMVAATPLELGDNAGSAVRGALVNALLDRFCANKDAPTCVDCPLFNVCPVAALVAPMRETGETGGDQRPRPYVTRPPQPRRYAPDETLTFGLGLFGHAAELFPYVVIAAQGIERQGLGRRLQEQNGRRGRVRLLAIHAVNPLTGDRQPLFQADQRQVQVPGIPIGPAEVAAFAATLPENRLTLRFLTPMRLIDKGGLVKRPALRPLIQRLGIRLTDLAAAYGDGPLPAADARALLPLAESATLEYDNTRWIDITSYSRRSGERTPIGGMVGEAVFTGNLGPLREILVWGSLVHVGKNAVKGDGWYVVEG
>NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1
MHLIVDQYGVFVSKHQGRIRVVKDKERLAEVPILHLEQIMICGDGIGLSSDVVRVCAEEGIPIHFVDSIGNDYGALMHGGITGMALTRRAQLRAGDDERGLMLAQAFASGKIQSQANLLRYAAKNRKESDPDLHHDLMRTATEILDTLPSVRAMRGVLTEETRAALMGFEGMSSARYWAAVARIIPDDLAWPGRETRGARDRFNQALNYGYGILQTQVRTALILAGLDPHAGFLHADRPGKPSLTLDLIEEFRQAVVDRTLIGLVNRQVEIGQGDDGLLDAATRKRIAEKILERLDSTEPYEGKRQPLRHILQCQARHIATFVRGERPTYEPFVMGW
>NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2
MRCLLIYDIPDDRVRQKIADACLDYGLQRIQYSAFAGNLSRTHQRELMTEVRRRLGKHAGNIQLFTFPDDIWNARRTIEQGEES
>NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4
MSDSTFEVTDLRQWAYCPRVVYYQYCLPDIRPVTKLMEAGQEEHRAESGREERRSLRTYGLKTGERFFDVPLRSETLGLRGRVDLVIAIPDRRQATEIVVVEYKSTEGKAGPHVKLQLTAYALMIEEAWGIPVKRGFIYHMPERKAEAVTISAALRTRVKETVAAIRATVDHERMPPPPASRRQCAVCEFRRFCNDVV
>NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTIYSFTVVIEPDEQGFHAYVPALPGCHTFADTVDEARTNILEALELHLHSMLEDGEPVPVEREPVFITRLSVPVAV

Crispr_ID: NC_009523_43

• CRISPR_ID: NC_009523_43
• CRISPR_location: 2316716-2320559
• Repeat_type: NA
• Spacer_info: 52 spacers
• Cas_protein_info: cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b2,csx3,csx1

Consensus repeat of NC_009523_43

Consensus_repeat	Method
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	PILER-CR
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CRISPRCasFinder
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CRT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACG	PILER-CR

spacers of NC_009523_43

>43.1|2316753|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ACGACATATTACGGGAGACGTGCATTCCCGCGGAATA
>43.2|2316827|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AGACGTTGACGCCATCAAACCATCGGATTTCAACGT
>43.3|2316900|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCGGAAAAATCCCGACGTTGTGCAGCACAAACTGCA
>43.4|2316973|39|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CCGACCGGAGCCAGTCCGGTTCGGGGAGATGTGTGGCAA
>43.5|2317049|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTCGCGCGGGAAACGCGGAAGTCGTTCTCCAGTTCG
>43.6|2317122|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CACGTTGAAGCAGTAGGCGTCGCCGGACGGCGTTGCG
>43.7|2317196|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AGCGCGGCGTGGATCAACAGGCGGTTCCGGTCAACG
>43.8|2317269|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CAGACGACACGGCCACCACACCGCGCTTGGACAAA
>43.9|2317341|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ACAATGTGTTACCCTCACCTTTGTGGGGTACAACAT
>43.10|2317414|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ATCACACGCAGCAGATCGAGCCACTGGCCGCCGCCACG
>43.11|2317489|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AAAGTTCGTATCTTGGCAGTTTGCGTCGCATTGTA
>43.12|2317561|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ACCGGCAAGCGGCTGGAGTGGCGGATGAACTTGTCAAC
>43.13|2317636|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ATACTCGAAGATGCGTTCGTCTTCGAGTTCGAGGTA
>43.14|2317709|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTCTTACCCGGGTGGTCAAGCCGCGCCGGTTTCCGC
>43.15|2317782|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCGCTGCGCCGCCTCATCGAGGTCGGCGTACTCGAA
>43.16|2317855|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GATCCAGGCGGGCGTCGAGGCGCAACTGCGCATCA
>43.17|2317927|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCAGAATTGTTCTACCGCCGGTTTCTGCCGGACG
>43.18|2317999|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCTGTGCGATCAGGCGCTCGTAGGGCAGACCGAACG
>43.19|2318072|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTCGACCGGCTGATGCTGAAACGTCAGCGTTGTCGG
>43.20|2318145|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCGCGTGTTGTCGGTGGGGCATCGCGTCTCGCTGGT
>43.21|2318218|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCGCGTTGGTGGACGGCAGCCAGGACGCGCCGGCG
>43.22|2318290|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGTGCGCGGCGGGATGAGACCCGCTTGTTCTAGT
>43.23|2318362|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GAATGCCCAACGCCCGCGCTTTGCTGACGAGTGCG
>43.24|2318434|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ATGGACGGATCGGCGCGGTACTCGTGGACGAGCTGCA
>43.25|2318508|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTATTTCGGCTTTACTGGTCTCTTACCGGCGGCGTCC
>43.26|2318582|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTCGTGCGCACGTTTGTGTGTCAGGGAGACTCGTAT
>43.27|2318655|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCTCGATAAGTTTGTGGTTGCTCACCACATTCATT
>43.28|2318727|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTCAGTACGTTCAATCGCCGCATTGCGATAGAGATAG
>43.29|2318801|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTGTGTAGTAGCGCTTGCGCGCGGTTATCTCAATG
>43.30|2318873|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCTTCCGCCTTCTTGATTACCGCGCCCGCAATCG
>43.31|2318945|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCGCGGCAGAGGCAGCATCTCGCCGAAGGCGGCGAAG
>43.32|2319019|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCAAACTCGCGCAGCGCCCAGGCGAGGATGACGACG
>43.33|2319092|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AGGAGCAGGCGGCGTCTCCCTCCTCTTCGAGGCGGA
>43.34|2319165|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ATCGGATATGGGAAGGCGTTAGGAACTGGGACGGTAA
>43.35|2319239|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTCGGTGCGCTCCGATGCGTACCCGACGACGATTATC
>43.36|2319313|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGTAGCGGAGAATGCGATACTGAATATCGCTGTCTG
>43.37|2319386|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCCTCATACTGACTCAACCACTCGTCAAGTTCCAGCA
>43.38|2319460|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCACGCGGACGAAGGCGTGCGCAGCACATCGAATA
>43.39|2319532|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCACGCCGTCGGCGACGTGGATGCCGGGGAATGGAG
>43.40|2319605|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TACGTCGGGATTGTCAAGCGACGCGCCGCGTCAACGA
>43.41|2319679|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTCGAAGGTGACGACCTCGTAGTTGGTGTCACCGGTGA
>43.42|2319754|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTCACTTCCGCGCCGATTTTCTCATCAAACCACGTGC
>43.43|2319828|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCCGTCGTACAGCCGGTAGAATACCCGTTCGTCCGT
>43.44|2319901|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTCTTATTATACCGGAAACGCCCCGCTTTTTCGTACA
>43.45|2319975|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGAGTACGACATCTCAGAAAGGACGGTACGAATTGA
>43.46|2320048|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTCAGCCTCGTCCGCCAGTTCGTTCCAGCGGGTTGCG
>43.47|2320122|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCTGCGTGTGGGCGCTGGCGAGGTAGAAAGGATTTG
>43.48|2320195|35|NC_009523|CRISPRCasFinder,CRT
AGGGGAGGAAGGTAGTCTATGAACACCATCTCTTG
>43.49|2320267|38|NC_009523|CRISPRCasFinder,CRT
GGCGACGACAGTGATTATACGGTTATCGAGATTGTCGC
>43.50|2320342|35|NC_009523|CRISPRCasFinder,CRT
GCCAGAAACCCGCAGCGACTCGCTTGCGCGCCAAA
>43.51|2320414|36|NC_009523|CRISPRCasFinder,CRT
GATCTATAGCCGCGATAGCCGTACAGCGCATACGGT
>43.52|2320487|35|NC_009523|CRISPRCasFinder,CRT
TGCAGCGACGTCGCATCACCTGAACCACCTGCAAC
>43.53|2320343|34|NC_009523|PILER-CR
CCAGAAACCCGCAGCGACTCGCTTGCGCGCCAAA
>43.54|2320415|35|NC_009523|PILER-CR
ATCTATAGCCGCGATAGCCGTACAGCGCATACGGT

CRISPR arrays and Neighbor proteins around NC_009523_43

CRISPR arrays

The CRISPR arrays of NC_009523_43

>merge|NC_009523|43|2316716-2320559|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACACGACATATTACGGGAGACGTGCATTCCCGCGGAATAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACAGACGTTGACGCCATCAAACCATCGGATTTCAACGTATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCGGAAAAATCCCGACGTTGTGCAGCACAAACTGCAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCCGACCGGAGCCAGTCCGGTTCGGGGAGATGTGTGGCAAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTTCGCGCGGGAAACGCGGAAGTCGTTCTCCAGTTCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCACGTTGAAGCAGTAGGCGTCGCCGGACGGCGTTGCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACAGCGCGGCGTGGATCAACAGGCGGTTCCGGTCAACGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCAGACGACACGGCCACCACACCGCGCTTGGACAAAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACACAATGTGTTACCCTCACCTTTGTGGGGTACAACATATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACATCACACGCAGCAGATCGAGCCACTGGCCGCCGCCACGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACAAAGTTCGTATCTTGGCAGTTTGCGTCGCATTGTAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACACCGGCAAGCGGCTGGAGTGGCGGATGAACTTGTCAACATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACATACTCGAAGATGCGTTCGTCTTCGAGTTCGAGGTAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCTCTTACCCGGGTGGTCAAGCCGCGCCGGTTTCCGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCGCTGCGCCGCCTCATCGAGGTCGGCGTACTCGAAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGATCCAGGCGGGCGTCGAGGCGCAACTGCGCATCAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCGCAGAATTGTTCTACCGCCGGTTTCTGCCGGACGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCTGTGCGATCAGGCGCTCGTAGGGCAGACCGAACGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTTCGACCGGCTGATGCTGAAACGTCAGCGTTGTCGGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCGCGTGTTGTCGGTGGGGCATCGCGTCTCGCTGGTATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCGCGTTGGTGGACGGCAGCCAGGACGCGCCGGCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCTGTGCGCGGCGGGATGAGACCCGCTTGTTCTAGTATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGAATGCCCAACGCCCGCGCTTTGCTGACGAGTGCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACATGGACGGATCGGCGCGGTACTCGTGGACGAGCTGCAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGTATTTCGGCTTTACTGGTCTCTTACCGGCGGCGTCCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGTCGTGCGCACGTTTGTGTGTCAGGGAGACTCGTATATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCTCGATAAGTTTGTGGTTGCTCACCACATTCATTATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCTCAGTACGTTCAATCGCCGCATTGCGATAGAGATAGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGTGTGTAGTAGCGCTTGCGCGCGGTTATCTCAATGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCGCTTCCGCCTTCTTGATTACCGCGCCCGCAATCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCGCGGCAGAGGCAGCATCTCGCCGAAGGCGGCGAAGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCAAACTCGCGCAGCGCCCAGGCGAGGATGACGACGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACAGGAGCAGGCGGCGTCTCCCTCCTCTTCGAGGCGGAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACATCGGATATGGGAAGGCGTTAGGAACTGGGACGGTAAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGTCGGTGCGCTCCGATGCGTACCCGACGACGATTATCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCGTAGCGGAGAATGCGATACTGAATATCGCTGTCTGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCCTCATACTGACTCAACCACTCGTCAAGTTCCAGCAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCACGCGGACGAAGGCGTGCGCAGCACATCGAATAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCACGCCGTCGGCGACGTGGATGCCGGGGAATGGAGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTACGTCGGGATTGTCAAGCGACGCGCCGCGTCAACGAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGTCGAAGGTGACGACCTCGTAGTTGGTGTCACCGGTGAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGTCACTTCCGCGCCGATTTTCTCATCAAACCACGTGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCCGTCGTACAGCCGGTAGAATACCCGTTCGTCCGTATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTTCTTATTATACCGGAAACGCCCCGCTTTTTCGTACAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCGAGTACGACATCTCAGAAAGGACGGTACGAATTGAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTTCAGCCTCGTCCGCCAGTTCGTTCCAGCGGGTTGCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCTGCGTGTGGGCGCTGGCGAGGTAGAAAGGATTTGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACAGGGGAGGAAGGTAGTCTATGAACACCATCTCTTGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGGCGACGACAGTGATTATACGGTTATCGAGATTGTCGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCCAGAAACCCGCAGCGACTCGCTTGCGCGCCAAAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGATCTATAGCCGCGATAGCCGTACAGCGCATACGGTATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTGCAGCGACGTCGCATCACCTGAACCACCTGCAACATTTCGGCAATTTCGACTCGTTGAAGAGTACTAGACTT

>NC_009523|43|3|2316716-2320194|PILER-CR
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACGACATATTACGGGAGACGTGCATTCCCGCGGAATA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGACGTTGACGCCATCAAACCATCGGATTTCAACGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGGAAAAATCCCGACGTTGTGCAGCACAAACTGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CCGACCGGAGCCAGTCCGGTTCGGGGAGATGTGTGGCAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCGCGCGGGAAACGCGGAAGTCGTTCTCCAGTTCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CACGTTGAAGCAGTAGGCGTCGCCGGACGGCGTTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGCGCGGCGTGGATCAACAGGCGGTTCCGGTCAACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CAGACGACACGGCCACCACACCGCGCTTGGACAAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACAATGTGTTACCCTCACCTTTGTGGGGTACAACAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATCACACGCAGCAGATCGAGCCACTGGCCGCCGCCACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AAAGTTCGTATCTTGGCAGTTTGCGTCGCATTGTA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACCGGCAAGCGGCTGGAGTGGCGGATGAACTTGTCAAC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATACTCGAAGATGCGTTCGTCTTCGAGTTCGAGGTA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCTTACCCGGGTGGTCAAGCCGCGCCGGTTTCCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCTGCGCCGCCTCATCGAGGTCGGCGTACTCGAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GATCCAGGCGGGCGTCGAGGCGCAACTGCGCATCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCAGAATTGTTCTACCGCCGGTTTCTGCCGGACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTGTGCGATCAGGCGCTCGTAGGGCAGACCGAACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCGACCGGCTGATGCTGAAACGTCAGCGTTGTCGG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGCGTGTTGTCGGTGGGGCATCGCGTCTCGCTGGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGCGTTGGTGGACGGCAGCCAGGACGCGCCGGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTGTGCGCGGCGGGATGAGACCCGCTTGTTCTAGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GAATGCCCAACGCCCGCGCTTTGCTGACGAGTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATGGACGGATCGGCGCGGTACTCGTGGACGAGCTGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTATTTCGGCTTTACTGGTCTCTTACCGGCGGCGTCC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGTGCGCACGTTTGTGTGTCAGGGAGACTCGTAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTCGATAAGTTTGTGGTTGCTCACCACATTCATT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCAGTACGTTCAATCGCCGCATTGCGATAGAGATAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTGTGTAGTAGCGCTTGCGCGCGGTTATCTCAATG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCTTCCGCCTTCTTGATTACCGCGCCCGCAATCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCGGCAGAGGCAGCATCTCGCCGAAGGCGGCGAAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCAAACTCGCGCAGCGCCCAGGCGAGGATGACGACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGGAGCAGGCGGCGTCTCCCTCCTCTTCGAGGCGGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATCGGATATGGGAAGGCGTTAGGAACTGGGACGGTAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGGTGCGCTCCGATGCGTACCCGACGACGATTATC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGTAGCGGAGAATGCGATACTGAATATCGCTGTCTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCTCATACTGACTCAACCACTCGTCAAGTTCCAGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCACGCGGACGAAGGCGTGCGCAGCACATCGAATA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCACGCCGTCGGCGACGTGGATGCCGGGGAATGGAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TACGTCGGGATTGTCAAGCGACGCGCCGCGTCAACGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGAAGGTGACGACCTCGTAGTTGGTGTCACCGGTGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCACTTCCGCGCCGATTTTCTCATCAAACCACGTGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCGTCGTACAGCCGGTAGAATACCCGTTCGTCCGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCTTATTATACCGGAAACGCCCCGCTTTTTCGTACA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGAGTACGACATCTCAGAAAGGACGGTACGAATTGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCAGCCTCGTCCGCCAGTTCGTTCCAGCGGGTTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCTGCGTGTGGGCGCTGGCGAGGTAGAAAGGATTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACAGGGGAGGAAGGTAGTCTATGAACACCATCTCTTGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGGCGACGACAGTGATTATACGGTTATCGAGATTGTCGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACG	CCAGAAACCCGCAGCGACTCGCTTGCGCGCCAAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACG	ATCTATAGCCGCGATAGCCGTACAGCGCATACGGT


>NC_009523|43|40|2316716-2320559|CRISPRCasFinder
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACGACATATTACGGGAGACGTGCATTCCCGCGGAATA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGACGTTGACGCCATCAAACCATCGGATTTCAACGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGGAAAAATCCCGACGTTGTGCAGCACAAACTGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CCGACCGGAGCCAGTCCGGTTCGGGGAGATGTGTGGCAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCGCGCGGGAAACGCGGAAGTCGTTCTCCAGTTCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CACGTTGAAGCAGTAGGCGTCGCCGGACGGCGTTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGCGCGGCGTGGATCAACAGGCGGTTCCGGTCAACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CAGACGACACGGCCACCACACCGCGCTTGGACAAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACAATGTGTTACCCTCACCTTTGTGGGGTACAACAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATCACACGCAGCAGATCGAGCCACTGGCCGCCGCCACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AAAGTTCGTATCTTGGCAGTTTGCGTCGCATTGTA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACCGGCAAGCGGCTGGAGTGGCGGATGAACTTGTCAAC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATACTCGAAGATGCGTTCGTCTTCGAGTTCGAGGTA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCTTACCCGGGTGGTCAAGCCGCGCCGGTTTCCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCTGCGCCGCCTCATCGAGGTCGGCGTACTCGAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GATCCAGGCGGGCGTCGAGGCGCAACTGCGCATCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCAGAATTGTTCTACCGCCGGTTTCTGCCGGACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTGTGCGATCAGGCGCTCGTAGGGCAGACCGAACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCGACCGGCTGATGCTGAAACGTCAGCGTTGTCGG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGCGTGTTGTCGGTGGGGCATCGCGTCTCGCTGGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGCGTTGGTGGACGGCAGCCAGGACGCGCCGGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTGTGCGCGGCGGGATGAGACCCGCTTGTTCTAGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GAATGCCCAACGCCCGCGCTTTGCTGACGAGTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATGGACGGATCGGCGCGGTACTCGTGGACGAGCTGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTATTTCGGCTTTACTGGTCTCTTACCGGCGGCGTCC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGTGCGCACGTTTGTGTGTCAGGGAGACTCGTAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTCGATAAGTTTGTGGTTGCTCACCACATTCATT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCAGTACGTTCAATCGCCGCATTGCGATAGAGATAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTGTGTAGTAGCGCTTGCGCGCGGTTATCTCAATG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCTTCCGCCTTCTTGATTACCGCGCCCGCAATCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCGGCAGAGGCAGCATCTCGCCGAAGGCGGCGAAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCAAACTCGCGCAGCGCCCAGGCGAGGATGACGACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGGAGCAGGCGGCGTCTCCCTCCTCTTCGAGGCGGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATCGGATATGGGAAGGCGTTAGGAACTGGGACGGTAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGGTGCGCTCCGATGCGTACCCGACGACGATTATC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGTAGCGGAGAATGCGATACTGAATATCGCTGTCTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCTCATACTGACTCAACCACTCGTCAAGTTCCAGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCACGCGGACGAAGGCGTGCGCAGCACATCGAATA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCACGCCGTCGGCGACGTGGATGCCGGGGAATGGAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TACGTCGGGATTGTCAAGCGACGCGCCGCGTCAACGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGAAGGTGACGACCTCGTAGTTGGTGTCACCGGTGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCACTTCCGCGCCGATTTTCTCATCAAACCACGTGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCGTCGTACAGCCGGTAGAATACCCGTTCGTCCGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCTTATTATACCGGAAACGCCCCGCTTTTTCGTACA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGAGTACGACATCTCAGAAAGGACGGTACGAATTGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCAGCCTCGTCCGCCAGTTCGTTCCAGCGGGTTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCTGCGTGTGGGCGCTGGCGAGGTAGAAAGGATTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGGGGAGGAAGGTAGTCTATGAACACCATCTCTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GGCGACGACAGTGATTATACGGTTATCGAGATTGTCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCCAGAAACCCGCAGCGACTCGCTTGCGCGCCAAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GATCTATAGCCGCGATAGCCGTACAGCGCATACGGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TGCAGCGACGTCGCATCACCTGAACCACCTGCAAC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTAGACTT

>NC_009523|43|4|2316716-2320558|CRT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACGACATATTACGGGAGACGTGCATTCCCGCGGAATA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGACGTTGACGCCATCAAACCATCGGATTTCAACGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGGAAAAATCCCGACGTTGTGCAGCACAAACTGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CCGACCGGAGCCAGTCCGGTTCGGGGAGATGTGTGGCAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCGCGCGGGAAACGCGGAAGTCGTTCTCCAGTTCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CACGTTGAAGCAGTAGGCGTCGCCGGACGGCGTTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGCGCGGCGTGGATCAACAGGCGGTTCCGGTCAACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CAGACGACACGGCCACCACACCGCGCTTGGACAAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACAATGTGTTACCCTCACCTTTGTGGGGTACAACAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATCACACGCAGCAGATCGAGCCACTGGCCGCCGCCACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AAAGTTCGTATCTTGGCAGTTTGCGTCGCATTGTA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACCGGCAAGCGGCTGGAGTGGCGGATGAACTTGTCAAC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATACTCGAAGATGCGTTCGTCTTCGAGTTCGAGGTA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCTTACCCGGGTGGTCAAGCCGCGCCGGTTTCCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCTGCGCCGCCTCATCGAGGTCGGCGTACTCGAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GATCCAGGCGGGCGTCGAGGCGCAACTGCGCATCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCAGAATTGTTCTACCGCCGGTTTCTGCCGGACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTGTGCGATCAGGCGCTCGTAGGGCAGACCGAACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCGACCGGCTGATGCTGAAACGTCAGCGTTGTCGG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGCGTGTTGTCGGTGGGGCATCGCGTCTCGCTGGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGCGTTGGTGGACGGCAGCCAGGACGCGCCGGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTGTGCGCGGCGGGATGAGACCCGCTTGTTCTAGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GAATGCCCAACGCCCGCGCTTTGCTGACGAGTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATGGACGGATCGGCGCGGTACTCGTGGACGAGCTGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTATTTCGGCTTTACTGGTCTCTTACCGGCGGCGTCC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGTGCGCACGTTTGTGTGTCAGGGAGACTCGTAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTCGATAAGTTTGTGGTTGCTCACCACATTCATT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCAGTACGTTCAATCGCCGCATTGCGATAGAGATAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTGTGTAGTAGCGCTTGCGCGCGGTTATCTCAATG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCTTCCGCCTTCTTGATTACCGCGCCCGCAATCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCGGCAGAGGCAGCATCTCGCCGAAGGCGGCGAAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCAAACTCGCGCAGCGCCCAGGCGAGGATGACGACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGGAGCAGGCGGCGTCTCCCTCCTCTTCGAGGCGGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATCGGATATGGGAAGGCGTTAGGAACTGGGACGGTAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGGTGCGCTCCGATGCGTACCCGACGACGATTATC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGTAGCGGAGAATGCGATACTGAATATCGCTGTCTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCTCATACTGACTCAACCACTCGTCAAGTTCCAGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCACGCGGACGAAGGCGTGCGCAGCACATCGAATA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCACGCCGTCGGCGACGTGGATGCCGGGGAATGGAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TACGTCGGGATTGTCAAGCGACGCGCCGCGTCAACGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGAAGGTGACGACCTCGTAGTTGGTGTCACCGGTGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCACTTCCGCGCCGATTTTCTCATCAAACCACGTGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCGTCGTACAGCCGGTAGAATACCCGTTCGTCCGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCTTATTATACCGGAAACGCCCCGCTTTTTCGTACA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGAGTACGACATCTCAGAAAGGACGGTACGAATTGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCAGCCTCGTCCGCCAGTTCGTTCCAGCGGGTTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCTGCGTGTGGGCGCTGGCGAGGTAGAAAGGATTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGGGGAGGAAGGTAGTCTATGAACACCATCTCTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GGCGACGACAGTGATTATACGGTTATCGAGATTGTCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCCAGAAACCCGCAGCGACTCGCTTGCGCGCCAAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GATCTATAGCCGCGATAGCCGTACAGCGCATACGGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TGCAGCGACGTCGCATCACCTGAACCACCTGCAAC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTAGACT

>NC_009523|43|4|2320305-2320487|PILER-CR
	ACGACATATTACGGGAGACGTGCATTCCCGCGGAATA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGACGTTGACGCCATCAAACCATCGGATTTCAACGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGGAAAAATCCCGACGTTGTGCAGCACAAACTGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CCGACCGGAGCCAGTCCGGTTCGGGGAGATGTGTGGCAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCGCGCGGGAAACGCGGAAGTCGTTCTCCAGTTCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CACGTTGAAGCAGTAGGCGTCGCCGGACGGCGTTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGCGCGGCGTGGATCAACAGGCGGTTCCGGTCAACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CAGACGACACGGCCACCACACCGCGCTTGGACAAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACAATGTGTTACCCTCACCTTTGTGGGGTACAACAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATCACACGCAGCAGATCGAGCCACTGGCCGCCGCCACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AAAGTTCGTATCTTGGCAGTTTGCGTCGCATTGTA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ACCGGCAAGCGGCTGGAGTGGCGGATGAACTTGTCAAC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATACTCGAAGATGCGTTCGTCTTCGAGTTCGAGGTA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCTTACCCGGGTGGTCAAGCCGCGCCGGTTTCCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCTGCGCCGCCTCATCGAGGTCGGCGTACTCGAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GATCCAGGCGGGCGTCGAGGCGCAACTGCGCATCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCAGAATTGTTCTACCGCCGGTTTCTGCCGGACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTGTGCGATCAGGCGCTCGTAGGGCAGACCGAACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCGACCGGCTGATGCTGAAACGTCAGCGTTGTCGG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGCGTGTTGTCGGTGGGGCATCGCGTCTCGCTGGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGCGTTGGTGGACGGCAGCCAGGACGCGCCGGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTGTGCGCGGCGGGATGAGACCCGCTTGTTCTAGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GAATGCCCAACGCCCGCGCTTTGCTGACGAGTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATGGACGGATCGGCGCGGTACTCGTGGACGAGCTGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTATTTCGGCTTTACTGGTCTCTTACCGGCGGCGTCC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGTGCGCACGTTTGTGTGTCAGGGAGACTCGTAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTCGATAAGTTTGTGGTTGCTCACCACATTCATT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCAGTACGTTCAATCGCCGCATTGCGATAGAGATAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTGTGTAGTAGCGCTTGCGCGCGGTTATCTCAATG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCTTCCGCCTTCTTGATTACCGCGCCCGCAATCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCGGCAGAGGCAGCATCTCGCCGAAGGCGGCGAAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCAAACTCGCGCAGCGCCCAGGCGAGGATGACGACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGGAGCAGGCGGCGTCTCCCTCCTCTTCGAGGCGGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	ATCGGATATGGGAAGGCGTTAGGAACTGGGACGGTAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGGTGCGCTCCGATGCGTACCCGACGACGATTATC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGTAGCGGAGAATGCGATACTGAATATCGCTGTCTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCTCATACTGACTCAACCACTCGTCAAGTTCCAGCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCACGCGGACGAAGGCGTGCGCAGCACATCGAATA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCACGCCGTCGGCGACGTGGATGCCGGGGAATGGAG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TACGTCGGGATTGTCAAGCGACGCGCCGCGTCAACGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGAAGGTGACGACCTCGTAGTTGGTGTCACCGGTGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCACTTCCGCGCCGATTTTCTCATCAAACCACGTGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCGTCGTACAGCCGGTAGAATACCCGTTCGTCCGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCTTATTATACCGGAAACGCCCCGCTTTTTCGTACA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGAGTACGACATCTCAGAAAGGACGGTACGAATTGA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TTCAGCCTCGTCCGCCAGTTCGTTCCAGCGGGTTGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCTGCGTGTGGGCGCTGGCGAGGTAGAAAGGATTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACAGGGGAGGAAGGTAGTCTATGAACACCATCTCTTGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGGCGACGACAGTGATTATACGGTTATCGAGATTGTCGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACG	CCAGAAACCCGCAGCGACTCGCTTGCGCGCCAAA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACG	ATCTATAGCCGCGATAGCCGTACAGCGCATACGGT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956616.1|2333425_2334856_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl|CDD|184633
NC_009523.1|WP_041335079.1|2327382_2328051_+|ComF-family-protein	unknown	unknown	gnl|CDD|223970
NC_009523.1|WP_011956613.1|2330882_2331575_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl|CDD|273040
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|378256
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl|CDD|337605
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|273707
NC_009523.1|WP_011956612.1|2329509_2330886_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|223679
NC_009523.1|WP_011956615.1|2332586_2333426_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	gnl|CDD|187796
NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl|CDD|274215
NC_009523.1|WP_083763284.1|2326436_2326625_+|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl|CDD|273860
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	csx3	mkCas0115_csx3_CAS-I:CAS-III	gnl|CDD|187871
NC_009523.1|WP_011956614.1|2331721_2332579_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009523.1|WP_011956611.1|2328059_2329493_-|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009523.1|WP_011956599.1|2304702_2305596_-|histidine-kinase	csx1	pfam09623_csx1_CAS-III	gnl|CDD|370585

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	4.1e-255	841.6	0.2
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	5.7e-34	112.6	0.1
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	6.5e-20	66.0	0.0
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	3.4e-83	274.2	0.0
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	5.5e-15	50.3	0.1
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	2.6e-83	274.4	0.0
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	1.6e-70	233.0	0.0
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	csx3	mkCas0115_csx3_CAS-I:CAS-III	3.2e-68	224.4	0.0
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	8.3e-53	174.2	0.0
NC_009523.1|WP_011956599.1|2304702_2305596_-|histidine-kinase	csx1	pfam09623_csx1_CAS-III	2.7e-58	192.0	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956616.1|2333425_2334856_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl|CDD|184633	PRK14338, PRK14338, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NC_009523.1|WP_041335079.1|2327382_2328051_+|ComF-family-protein	gnl|CDD|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	1.88076e-49
NC_009523.1|WP_011956615.1|2332586_2333426_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	5.01783e-14
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	7.68934e-34
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	1.70251e-14
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	0.000474164
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	4.05375e-71
NC_009523.1|WP_011956612.1|2329509_2330886_-|AAA-family-ATPase	gnl|CDD|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	1.08918e-10
NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl|CDD|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.52405e-13
NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.592e-16
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	2.16806e-51
NC_009523.1|WP_083763284.1|2326436_2326625_+|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.80795e-07
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	2.81484e-28
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	6.1165e-97
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	gnl|CDD|187871	cd09740, Csx3_III-U, CRISPR/Cas system-associated protein Csx3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small protein in some cases fused to Csx1 (COG1517) family domains.	5.42096e-10
NC_009523.1|WP_011956614.1|2331721_2332579_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.65069e-08
NC_009523.1|WP_011956611.1|2328059_2329493_-|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	1.19543e-161
NC_009523.1|WP_011956599.1|2304702_2305596_-|histidine-kinase	gnl|CDD|370585	pfam09623, Cas_NE0113, CRISPR-associated protein NE0113 (Cas_NE0113). Members of this minor CRISPR-associated (Cas) protein family are encoded in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.	1.03099e-68

Protein sequences

>NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4
MSDSTFEVTDLRQWAYCPRVVYYQYCLPDIRPVTKLMEAGQEEHRAESGREERRSLRTYGLKTGERFFDVPLRSETLGLRGRVDLVIAIPDRRQATEIVVVEYKSTEGKAGPHVKLQLTAYALMIEEAWGIPVKRGFIYHMPERKAEAVTISAALRTRVKETVAAIRATVDHERMPPPPASRRQCAVCEFRRFCNDVV
>NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2
MRCLLIYDIPDDRVRQKIADACLDYGLQRIQYSAFAGNLSRTHQRELMTEVRRRLGKHAGNIQLFTFPDDIWNARRTIEQGEES
>NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1
MHLIVDQYGVFVSKHQGRIRVVKDKERLAEVPILHLEQIMICGDGIGLSSDVVRVCAEEGIPIHFVDSIGNDYGALMHGGITGMALTRRAQLRAGDDERGLMLAQAFASGKIQSQANLLRYAAKNRKESDPDLHHDLMRTATEILDTLPSVRAMRGVLTEETRAALMGFEGMSSARYWAAVARIIPDDLAWPGRETRGARDRFNQALNYGYGILQTQVRTALILAGLDPHAGFLHADRPGKPSLTLDLIEEFRQAVVDRTLIGLVNRQVEIGQGDDGLLDAATRKRIAEKILERLDSTEPYEGKRQPLRHILQCQARHIATFVRGERPTYEPFVMGW
>NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSLLTHHLQFTMVAATPLELGDNAGSAVRGALVNALLDRFCANKDAPTCVDCPLFNVCPVAALVAPMRETGETGGDQRPRPYVTRPPQPRRYAPDETLTFGLGLFGHAAELFPYVVIAAQGIERQGLGRRLQEQNGRRGRVRLLAIHAVNPLTGDRQPLFQADQRQVQVPGIPIGPAEVAAFAATLPENRLTLRFLTPMRLIDKGGLVKRPALRPLIQRLGIRLTDLAAAYGDGPLPAADARALLPLAESATLEYDNTRWIDITSYSRRSGERTPIGGMVGEAVFTGNLGPLREILVWGSLVHVGKNAVKGDGWYVVEG
>NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3
MKPLPWPDWMDHLLAKSKRYGGETLAGHTWDVLCRLADLYRLRPHLTDDTRLWHCLYWSAFLHDFGKAAQGFQRRLRGGPKWAHRHEVLSLAFVDAIAHDLNEAEQRWVVAAIVSHHRDATEIAELYPSGLRRDPLIDLCNELDAETVAHLLRWIAECANRWRDLLGLTADVGAIDPQPCSVGAQRVRYWLRMYHDWVDTLDGEGSDARRPGILLRGLITSADHMASAHLRRLPPPIRLSWQDVAMRCNLSPDQVYPHQRQSAGQSAQSALLMVPTGSGKTEAALSWALGDGRNPPARIFYTLPYQASMNAMYDRLRQTFGDDVVGLQHGRATQALYARFREGDEWSATAARRAQWEKNLNLLHARPLKVLSPYQLLKALFQLRGFEAMLTDYAHAAFIFDEIHAYEPERLALITGLMRYLREHFAARFFVMSATFPELIRSHLRTALGDTPLIRATPDIFDRFRRHQLCLRDGELTDPATITEIVEAVRNGKQVLVCANTVARAQMVRDLLTHAGLTDEHLILIHSRFTYGDRSRLEQAIGARCRSNSANRSPLALVATQVVEVSLDIDLDVLYSDPAPLEALLQRFGRVNRKAAKGICPVYVFRQPDDGQGVYGRDRDPERSGRIVRVTLAELEQHDGAIIDEATINEWLDRIYADPLLNQQWRDAYQRMAHQVDLIIQGIRPFQSDEQREDEFERMFDGVDVVPQCFERDYVHLLVEERFIEANDYLVSISKQRFAILRNQGKLRPAEETDQRRVWVAQTPYDARNGLSFGDRVVDMDWI
>NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5
MQALKIVLEGVTTSFRYPHFMLGVQPGFPLPPPATIYGHVCSALGEWFDPEGVAFAYHFTVAGEGYDLEHIHVLSASSGKLPGGERKALEGNINPFKRQILLFPRLTLYLNRPEWIDAFRRPRYPVVLGRSQDLASYTRIEIVELQPAEQVYFEHTLLPYSMAAQAPAGVVTLMPRWIDYRQRRRPGFARYLMLTERITTKHMLRFGQQTPVYWSDPTVPMVDGLPLGLWFHTFVGADNETLTVA
>NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAFVTGLLLIDAPASALNNLGSIPGEREENTVGVKMITTKTGNFPYVSAQAFRYWLRTTLEQRVPEWRASPIFREEKIAYTDANPIRYWDDDLFGYMRAPGKADTARKSREQISLLEDATPVKETVTRASPFRVSTLVSIAPVNPTSDFGVMSRHEGNPVPHEHQFYRATLKGLFSLDLWACGTFSYRNRTGFRNLDDERVRLVADVSGVEHLKDEQSYRLPKDQRIARVKALFSGLAQLEGGAKQTLHYTDVSPALVIFAVTDGGNHIFHHTVGANRSGLPEIKIDALREALRVFADSIRSPVYVGWVRGYLDEARAGFEQFVAEHNAVAAKEGLPVITVSHPREAFMAFVAACDEHPEWLD
>NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MITYTGHPFVDTGFAVITAFVRKRRFADLADDDFQQIADYIEANYVRQPLRSFLTVAFTSNAWFAQSAFNPDRPDLSPEKQTEAREKRQYWADRHLRQWQQSAAALETCLFTGLPAAGLELSQKLQPGRVGRAQMPLLQGDDAINFFINGDPGLPMAAEAILALQAMPLGCAKVGGGLLAVHCDDEALTIAFATRFLQRNLNDVAKAQAAGEKKLPGSPRSLKTLLVETLTEILIRQIQEEERRARRPAITAYYFNNGQSPFLEIYHLPLQITGFLLAVHTPAYRAIWNELVQRGWQRAGISGKQGKAVDPVEPHFNYLYEDLFTLPAQAARFVRTYFLRIPDLRRSADDPRREYSPRREADLVSWPLVELFAQEVLLMTDDRVTKLKELGDKLADYTRYQGGKRFFRQFFVEQRSDNFLSLLNKANIDYTRYKRGQETLFDLDSFLTIFMEGDEVLRKDWRLMRDLVLIRMVEQLRDWIAGNPDAIPAEEEVAANE
>NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein
MNPFPAVVIGGPPHSGKSVLTYLLTRQLRALRVEHYVLRACPDGEGDWSQEAPPERVRLLRQKGQFSQDFVDRVCRDLAQRHLPLIVDVGGKPTPDQERILDQCTHAVLISANEAGLKEWRDRFERHGLPIIAELHSVLIGEDCIEAEIPVLRGQIANLERFTGVGGLMVEALAQQLQCLMTYTDADLKTYHCSHAPTELVVDVDHLAWWVELPEQQHWLPAYLARALTYAPKGTPLSIYGRGPNWLYAALALHAAPHQVYLFDPRMGWVAPVTLHCTPAATADAVAWKIEPFPTHTWIELTPTQPYLDYDDVNGTALPALDPSHGVVLSGKLPFWLLLGAALAYCHHPWLGIVQAQQYDECIVVMSRDAAYQPGACFRFRTDPHHGTTIGSMTQER
>NC_009523.1|WP_011956599.1|2304702_2305596_-|histidine-kinase
MTDTNSELAHTTTLVATLGGQPQIVTFALDALLARGEPITDVYLIHLSLTNPRTRQALSRLQQEFPNDYYAHTNRRCRLRRAPVGVNGVELTDIRTAADAEVAWQSIRTLIADLKNEGRRLHLCLSGGRRMLALLAMSAAALLCDHQDRIWHMHTPEETLQRVKDGALMHVDPSDGVQLIQTPIVPWGACFPALRALALTSMQAVQEQLQRFAAIDEPQCRQVWERLSPRQRDVLRALAKGMRPDEAATHLNITLNTVNTHKTAILSECRVAWNLPDNAPLDYRFLRERFAGFLERV
>NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTIYSFTVVIEPDEQGFHAYVPALPGCHTFADTVDEARTNILEALELHLHSMLEDGEPVPVEREPVFITRLSVPVAV
>NC_009523.1|WP_083763284.1|2326436_2326625_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MSEKLPRIDCQELIRALERAGFVKKRQKGSHLHMWREADKKRMISRSPGEDRTAGVAARYSS
>NC_009523.1|WP_041335079.1|2327382_2328051_+|ComF-family-protein
MLCAGNAMMLFRWIDHLLSLLLPDRCVGCGQLGALLCDACRRRLVAYDGDLPRVADQLTGVQVAYVFDGALRQAVHQLKYRSRQRMARPLGALLADHLRAHPLPCDALIPVPLHPHRLAERGFNQAELLAREVAGVTGLPVIVGPLVRIRATRQQALLDTPGRIENVAGAFVWQGPPPPARVVLVDDVLTTGATVNACAQALRAGGARDVYALALARSRRST
>NC_009523.1|WP_011956611.1|2328059_2329493_-|CpaF-family-protein
MSLLKRIGGSQPQSTEPSTAVSAPTGAPASAPDNAATPRATVTSSGGDVSQQRMLELSLWIVDRILSSLGNQQELKRSPEMERQLQEKFTLAYRQSGVNLTDEQTRQLYDMVMDELFGFGPIEPLLRDDSISEVMVNGPRSVYVEQKGKLTLTSVRFANDEHVLKVIDRIIRPLGRRIDRKWPMVDARLPDGSRVNAIIPPCAIDGPSITIRKFAKKKLTVEDLIRFGSMTPEMAEFLRACVVSRLNIIVAGGTGSGKTTLLNVLSNFIPPDERIVTIEDSAELKLAQEHVVRLESKPPEIDGTGRVTINDLVINSLRMRPERIVIGECRGGETMAMLQAMNTGHDGSLSTLHANSPRDAIARMETMAMMAGMDIPLRVIREQIASAIDLIVQQTRLEDGSRKIAYITEVQGMEGDVVVLQDIFVLQILGKTPEGKIISELRPTGTRPRFTPRLEAHGFKLPPSIFGATVPGQKRPW
>NC_009523.1|WP_011956612.1|2329509_2330886_-|AAA-family-ATPase
MSFFSQQFAGKQQAASPSGASGSVSVPPEPASIEETGLSMGFLNDLVLKVVYFHGNITGQQIAEVTKLPFFGVLDKVLEFLKLEEYVDIVGAQGGFNERSFQYVIATKGRLKVHEVLDRSQYAGPAPVPLDQYIAMVHRQSVGDMVVDAKTVRQAFAHLVVSDRMLDRIGPAANSARSLFLYGPPGNGKTTIAEGIANMLGGHVLIPYAVEVDGQIIKVFDPLNHQLIEQPATAAAREPAVNFEGRPVVDSPLPDRRWLVCKRPRVMVGGELILEQLELIFDPIAKVYEAPYQMKANGGLFLIDDFGRQKCRPQDLLNRWIVPLEKKVDFLALQTGKKIQVPFDVLIVFSTNLSPQDLVDDAFLRRIRHKIEVPNPSPEEFRAIFQRVAKAKNIPYSDEGLRYLILERYKRDGRDLRSCHPRDLCDQILDEAKYRGIPPSMSRELLDRAYDAYFVKLS
>NC_009523.1|WP_011956613.1|2330882_2331575_-|hypothetical-protein
MEARIDEKGKFFTPRITKDAVTAFVRTAGKIIVGSVYVRPGNRLTDELNNDPSSFLPITDVRVYDADDERFQFQSSFILAAYREILLISELDALATIRDVPWNAPSAEPTPLIREDDDLGVHINERGKYFTVRTPKDAVLCAVRGGDLAVLGYLYVRPDRRLKDELNDEQARYLPMTDVRVFRVSDNMLLYHASFLLIGRHAIDIVAPIDAVTGASNVPWLPIRSTEGEG
>NC_009523.1|WP_011956614.1|2331721_2332579_-|tetratricopeptide-repeat-protein
MTLTKQDEKFRLQRRLQNQAVELAVNNRWEEAVQVNQKLISLAETTETYNRLGKAYFELGRLAEARDAYRNALRLTPNNRIARRNLERIEELLARSASLSGGLKAGRQLVDLRLFITEVGKTALTSLIDVQRGPALAAVVTGEKVELRPEGRGVAVYDMSGALIGRIEPKLAQRLNELMAGGNRYIAAVAHIDGRQVRIIIREIYQSPSQRGRVSFPGKLSESALRGGFISGAQFDEFGEELLEEEEGVEVREEVEEEVFGGEEEELGLEEIEPDIGDEDDLIEE
>NC_009523.1|WP_011956615.1|2332586_2333426_-|CPBP-family-intramembrane-metalloprotease
METLHPPAPRLPLPGAPRAAIGALVADLLIAIGMALILSVAVVGVMIGLRAAQTGLDVNALGQLNPQEITRLIGVDGMLTLLLLQNLVFIGVAVIRVRALRREPLAVLGFSAPQPLRLALFGVGLGVLALFVNGIVGMIFVSAGIRQNQAALYPLFPGDYLGQALFFVGAAILAPIGEEVLFRGYLFGSLRRLAGDSRAGIVIAYGVSALVFALAHSLAASEGVIALLVPSFLIGLVFAWGFDRSGSLLPGIVAHALNNSIAFAALLTCINNPGVCPQV
>NC_009523.1|WP_011956616.1|2333425_2334856_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTEVVHLHMPEEARATQSRDATPRERRYYVWTVGCQMNVSDSERLEAALQGVGYAPAERPEDASFIVLNSCSVRASAEERILGKLSEVQRLKRKHPDTKVVLWGCMVGPGNQSIFQSRLPMVDHFVSPSAVDEVLALAPNPIYQLEEPALPVARWDHPPVSVHVPIQYGCNMSCSFCVIPLRRGRERSRPLDEIVEECRRIVARGAKEITLLGQIVDSWGHDLPGRPDLADLLRAVHDIPGLLRLRFLTSHPAWMTDRLIAAVAELPRCMPDINLPVQAGDDALLKIMRRGYTVQRYRDLIAKIRDAIPDVSLTTDVIVGHPGETRERFEGTKRLLEDIRFDKVHIAAFSSRPGTRAADMELDPTLAVPEGEKQLRRIELERLQEQIAAERNARFLHQTVEVLVEGEHKGKWRGRTPGNKLVFFSDPDDWTGRLARVIITHTGPWSLQGVLARSDETFARVNGALHAVAAANGAAV

Crispr_ID: NC_009523_44

• CRISPR_ID: NC_009523_44
• CRISPR_location: 2321726-2325131
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 46 spacers
• Cas_protein_info: cas4,cas2,cas1,cas6,cas3,cas5,cas7,cas8b2,csx3

Consensus repeat of NC_009523_44

Consensus_repeat	Method
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	PILER-CR
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CRISPRCasFinder
ATTTCNGCAATTTCGNCTCGTTGAAGAGNACTGAAAC	CRT

spacers of NC_009523_44

>44.1|2321763|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGTCGAAGTCAAAAGGCGGGCAAGCGACGGATCGC
>44.2|2321835|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCCCGACTAACTCATCAAGCACGCGCCGGGGCATCAT
>44.3|2321909|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCAGCATCACGCGCGCCTTCAACACCGCGTAGGCG
>44.4|2321982|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTTGGCGACGTACAGCAGCGTTTCGCCCAGCCGCG
>44.5|2322054|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TGACAAGGATGGTTCATCGCCTGGCGCTGGATCGC
>44.6|2322126|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCGACGATCGGCGTCAACCGCGCCTCCGGCAGCACG
>44.7|2322199|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCAACACCGAAGCGCGTCAAGTGCCCGACGCGCCCG
>44.8|2322272|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCAGCATCAACTCCGCGACCGCTTGCGCATCGTTG
>44.9|2322344|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGCGGCGACCAACTGGTCGAACAACATCGGCGCGCCG
>44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCGAAGGCGTCGATGCGCGTGTCGATCACGCCGAACC
>44.11|2322492|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AGTTGGAACCACCACTCCGCCGCCCGTCGGTCGCG
>44.12|2322564|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCACGAGGTCGAAGAAGATGAAGAAGTACACCATC
>44.13|2322636|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCGATTGCAGCCGCAGCGCTTTGTACAGCAGCGCTT
>44.14|2322709|39|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTCTTCCAGTTCCGCTTTGCGCTCTGCGTCGCGCTTCTC
>44.15|2322785|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCGCCAAAACGTCGTTGGCGATCGGTTGAATAAAT
>44.16|2322857|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTCGGTCTGGCGAAGAAACTGCACTGCGAACTGAGC
>44.17|2322930|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGATGCGCTGTTCCATTGCGGCGTAGTCGGCGTTC
>44.18|2323002|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCGATACGCGCTCGAAGATCGGAATGAAAACGTCCA
>44.19|2323075|39|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCGTGGCGGTCGAGCGGCGCGTCCGGCGGCAGATGCGC
>44.20|2323151|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCTGTCCAGCGCGCGTAGACCGCAAACGGGTGCGGCG
>44.21|2323225|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ACCAGTAGTGATAGACGACCATCACACGCCTACAG
>44.22|2323297|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCCCGAAGATGGCTTGCAACGCCTTGAGTGCTTCGC
>44.23|2323370|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AGCCCTTCGGTTTCCGTTGCCGACAGAGCATGATCTGT
>44.24|2323445|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGAAGCCGTACAAGGCAAACGGTTGCGGGTCAGG
>44.25|2323517|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGAAGAGATCACGTATGTCCAGACGCACCCGCCGCG
>44.26|2323591|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTCGATGATGCTGTTGTGGACGGCAGCGGAGATCTG
>44.27|2323664|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGTCCGCTAATCCTCGAGATCATCACTGGCTGGTACT
>44.28|2323738|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CCACAGACTCCCGGACTGCACCTCCAACCAATACG
>44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGAGTTGGCGCTGCCGGTGCTGGAGCAAGATCAAG
>44.30|2323883|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTCCGTCGCCGCCAGCTCCCGCGCCACGCTGCGAATGA
>44.31|2323958|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGATCACCAGTTCGATCGCCACATCCCTGAGTTCAG
>44.32|2324031|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AAAGTAAGTTCTGCCCCTGTTAGAGCGCCCCACCAGAC
>44.33|2324106|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGCAGGGCTGTACCGTCGCCCGGCACGCCGTACCG
>44.34|2324178|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGGCGAGGGGAGTACGAACTCAAACGACACATCG
>44.35|2324250|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CCTGAAACACTGATAGCGCCCCCAGTCGGGGCGCTAT
>44.36|2324324|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TAGTTTTGAGAGAGTTGGGCTTTGCGCTGGCGTAGGCG
>44.37|2324399|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCCTTCCGCGACACAAACTCACGGTAGGAGGCGACCA
>44.38|2324473|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGGGCGACAGTTGCGCGGGAAGTGGGCTTGACGGA
>44.39|2324546|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGCTGCGGGCAGACCGGTACGGACAAAACCAGCACGA
>44.40|2324620|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTCGACCGGAACGCGCTGGCAGTAGAATTCGGGCAG
>44.41|2324693|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGGGCGTTGCGCCCGCTCAACTCAACTCCGCCGAT
>44.42|2324766|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGTTGGTCGATACGCTGGCGCTTGCGCTGGAGCAGC
>44.43|2324840|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AGAGAGACGTAGGAGGAGATCACGTGAACCTTCCA
>44.44|2324912|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TGGGCATCGTTGATTCCTCTCGTGTAGCACTTGAG
>44.45|2324984|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCGCTGACTACGAGTTTTCAACGTCTGATGACGGAG
>44.46|2325057|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCTGCGCGTTGTTGCACCAGCGCGCCCCGCGTCGGATC

CRISPR arrays and Neighbor proteins around NC_009523_44

CRISPR arrays

The CRISPR arrays of NC_009523_44

>merge|NC_009523|44|2321726-2325131|PILER-CR,CRISPRCasFinder,CRT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGGTCGAAGTCAAAAGGCGGGCAAGCGACGGATCGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCCCGACTAACTCATCAAGCACGCGCCGGGGCATCATATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCGCAGCATCACGCGCGCCTTCAACACCGCGTAGGCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGTTGGCGACGTACAGCAGCGTTTCGCCCAGCCGCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTGACAAGGATGGTTCATCGCCTGGCGCTGGATCGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCGACGATCGGCGTCAACCGCGCCTCCGGCAGCACGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCAACACCGAAGCGCGTCAAGTGCCCGACGCGCCCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCAGCATCAACTCCGCGACCGCTTGCGCATCGTTGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGGCGGCGACCAACTGGTCGAACAACATCGGCGCGCCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCGAAGGCGTCGATGCGCGTGTCGATCACGCCGAACCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACAGTTGGAACCACCACTCCGCCGCCCGTCGGTCGCGATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCACGAGGTCGAAGAAGATGAAGAAGTACACCATCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCGATTGCAGCCGCAGCGCTTTGTACAGCAGCGCTTATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCTCTTCCAGTTCCGCTTTGCGCTCTGCGTCGCGCTTCTCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCGCCAAAACGTCGTTGGCGATCGGTTGAATAAATATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGTCGGTCTGGCGAAGAAACTGCACTGCGAACTGAGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCGATGCGCTGTTCCATTGCGGCGTAGTCGGCGTTCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACGCGATACGCGCTCGAAGATCGGAATGAAAACGTCCAATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACCGCGTGGCGGTCGAGCGGCGCGTCCGGCGGCAGATGCGCATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAACTCTGTCCAGCGCGCGTAGACCGCAAACGGGTGCGGCGATTTCGGCAATTTCGGCTCGTTGAAGAGCACTGAAACACCAGTAGTGATAGACGACCATCACACGCCTACAGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACGCCCGAAGATGGCTTGCAACGCCTTGAGTGCTTCGCATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACAGCCCTTCGGTTTCCGTTGCCGACAGAGCATGATCTGTATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTGAAGCCGTACAAGGCAAACGGTTGCGGGTCAGGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTGAAGAGATCACGTATGTCCAGACGCACCCGCCGCGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTCGATGATGCTGTTGTGGACGGCAGCGGAGATCTGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACGGTCCGCTAATCCTCGAGATCATCACTGGCTGGTACTATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCCACAGACTCCCGGACTGCACCTCCAACCAATACGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTGAGTTGGCGCTGCCGGTGCTGGAGCAAGATCAAGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACGTCCGTCGCCGCCAGCTCCCGCGCCACGCTGCGAATGAATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACGGATCACCAGTTCGATCGCCACATCCCTGAGTTCAGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACAAAGTAAGTTCTGCCCCTGTTAGAGCGCCCCACCAGACATTTCAGCAATTTCGACTCGTTGAAGAGCACTGAAACGGCAGGGCTGTACCGTCGCCCGGCACGCCGTACCGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTGGCGAGGGGAGTACGAACTCAAACGACACATCGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCCTGAAACACTGATAGCGCCCCCAGTCGGGGCGCTATATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACTAGTTTTGAGAGAGTTGGGCTTTGCGCTGGCGTAGGCGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACTCCTTCCGCGACACAAACTCACGGTAGGAGGCGACCAATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTGGGCGACAGTTGCGCGGGAAGTGGGCTTGACGGAATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACGGCTGCGGGCAGACCGGTACGGACAAAACCAGCACGAATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTCGACCGGAACGCGCTGGCAGTAGAATTCGGGCAGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTGGGCGTTGCGCCCGCTCAACTCAACTCCGCCGATATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACCTGTTGGTCGATACGCTGGCGCTTGCGCTGGAGCAGCATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACAGAGAGACGTAGGAGGAGATCACGTGAACCTTCCAATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACTGGGCATCGTTGATTCCTCTCGTGTAGCACTTGAGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACTCGCTGACTACGAGTTTTCAACGTCTGATGACGGAGATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAACTCTGCGCGTTGTTGCACCAGCGCGCCCCGCGTCGGATCATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC

>NC_009523|44|5|2321726-2325131|PILER-CR
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GGTCGAAGTCAAAAGGCGGGCAAGCGACGGATCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCCGACTAACTCATCAAGCACGCGCCGGGGCATCAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCAGCATCACGCGCGCCTTCAACACCGCGTAGGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTTGGCGACGTACAGCAGCGTTTCGCCCAGCCGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TGACAAGGATGGTTCATCGCCTGGCGCTGGATCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGACGATCGGCGTCAACCGCGCCTCCGGCAGCACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCAACACCGAAGCGCGTCAAGTGCCCGACGCGCCCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCAGCATCAACTCCGCGACCGCTTGCGCATCGTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GGCGGCGACCAACTGGTCGAACAACATCGGCGCGCCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGAAGGCGTCGATGCGCGTGTCGATCACGCCGAACC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGTTGGAACCACCACTCCGCCGCCCGTCGGTCGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCACGAGGTCGAAGAAGATGAAGAAGTACACCATC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGATTGCAGCCGCAGCGCTTTGTACAGCAGCGCTT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCTTCCAGTTCCGCTTTGCGCTCTGCGTCGCGCTTCTC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCCAAAACGTCGTTGGCGATCGGTTGAATAAAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGGTCTGGCGAAGAAACTGCACTGCGAACTGAGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGATGCGCTGTTCCATTGCGGCGTAGTCGGCGTTC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGATACGCGCTCGAAGATCGGAATGAAAACGTCCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCGTGGCGGTCGAGCGGCGCGTCCGGCGGCAGATGCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTGTCCAGCGCGCGTAGACCGCAAACGGGTGCGGCG
ATTTCGGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	ACCAGTAGTGATAGACGACCATCACACGCCTACAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GCCCGAAGATGGCTTGCAACGCCTTGAGTGCTTCGC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AGCCCTTCGGTTTCCGTTGCCGACAGAGCATGATCTGT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAAGCCGTACAAGGCAAACGGTTGCGGGTCAGG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAAGAGATCACGTATGTCCAGACGCACCCGCCGCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTCGATGATGCTGTTGTGGACGGCAGCGGAGATCTG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGTCCGCTAATCCTCGAGATCATCACTGGCTGGTACT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CCACAGACTCCCGGACTGCACCTCCAACCAATACG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAGTTGGCGCTGCCGGTGCTGGAGCAAGATCAAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GTCCGTCGCCGCCAGCTCCCGCGCCACGCTGCGAATGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGATCACCAGTTCGATCGCCACATCCCTGAGTTCAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AAAGTAAGTTCTGCCCCTGTTAGAGCGCCCCACCAGAC
ATTTCAGCAATTTCGACTCGTTGAAGAGCACTGAAAC	GGCAGGGCTGTACCGTCGCCCGGCACGCCGTACCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGCGAGGGGAGTACGAACTCAAACGACACATCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CCTGAAACACTGATAGCGCCCCCAGTCGGGGCGCTAT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TAGTTTTGAGAGAGTTGGGCTTTGCGCTGGCGTAGGCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCCTTCCGCGACACAAACTCACGGTAGGAGGCGACCA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGGCGACAGTTGCGCGGGAAGTGGGCTTGACGGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGCTGCGGGCAGACCGGTACGGACAAAACCAGCACGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTCGACCGGAACGCGCTGGCAGTAGAATTCGGGCAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGGCGTTGCGCCCGCTCAACTCAACTCCGCCGAT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGTTGGTCGATACGCTGGCGCTTGCGCTGGAGCAGC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AGAGAGACGTAGGAGGAGATCACGTGAACCTTCCA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TGGGCATCGTTGATTCCTCTCGTGTAGCACTTGAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCGCTGACTACGAGTTTTCAACGTCTGATGACGGAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCTGCGCGTTGTTGCACCAGCGCGCCCCGCGTCGGATC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC

>NC_009523|44|41|2321726-2325131|CRISPRCasFinder
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GGTCGAAGTCAAAAGGCGGGCAAGCGACGGATCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCCGACTAACTCATCAAGCACGCGCCGGGGCATCAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCAGCATCACGCGCGCCTTCAACACCGCGTAGGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTTGGCGACGTACAGCAGCGTTTCGCCCAGCCGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TGACAAGGATGGTTCATCGCCTGGCGCTGGATCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGACGATCGGCGTCAACCGCGCCTCCGGCAGCACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCAACACCGAAGCGCGTCAAGTGCCCGACGCGCCCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCAGCATCAACTCCGCGACCGCTTGCGCATCGTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GGCGGCGACCAACTGGTCGAACAACATCGGCGCGCCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGAAGGCGTCGATGCGCGTGTCGATCACGCCGAACC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGTTGGAACCACCACTCCGCCGCCCGTCGGTCGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCACGAGGTCGAAGAAGATGAAGAAGTACACCATC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGATTGCAGCCGCAGCGCTTTGTACAGCAGCGCTT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCTTCCAGTTCCGCTTTGCGCTCTGCGTCGCGCTTCTC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCCAAAACGTCGTTGGCGATCGGTTGAATAAAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGGTCTGGCGAAGAAACTGCACTGCGAACTGAGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGATGCGCTGTTCCATTGCGGCGTAGTCGGCGTTC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGATACGCGCTCGAAGATCGGAATGAAAACGTCCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCGTGGCGGTCGAGCGGCGCGTCCGGCGGCAGATGCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTGTCCAGCGCGCGTAGACCGCAAACGGGTGCGGCG
ATTTCGGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	ACCAGTAGTGATAGACGACCATCACACGCCTACAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GCCCGAAGATGGCTTGCAACGCCTTGAGTGCTTCGC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AGCCCTTCGGTTTCCGTTGCCGACAGAGCATGATCTGT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAAGCCGTACAAGGCAAACGGTTGCGGGTCAGG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAAGAGATCACGTATGTCCAGACGCACCCGCCGCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTCGATGATGCTGTTGTGGACGGCAGCGGAGATCTG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGTCCGCTAATCCTCGAGATCATCACTGGCTGGTACT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CCACAGACTCCCGGACTGCACCTCCAACCAATACG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAGTTGGCGCTGCCGGTGCTGGAGCAAGATCAAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GTCCGTCGCCGCCAGCTCCCGCGCCACGCTGCGAATGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGATCACCAGTTCGATCGCCACATCCCTGAGTTCAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AAAGTAAGTTCTGCCCCTGTTAGAGCGCCCCACCAGAC
ATTTCAGCAATTTCGACTCGTTGAAGAGCACTGAAAC	GGCAGGGCTGTACCGTCGCCCGGCACGCCGTACCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGCGAGGGGAGTACGAACTCAAACGACACATCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CCTGAAACACTGATAGCGCCCCCAGTCGGGGCGCTAT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TAGTTTTGAGAGAGTTGGGCTTTGCGCTGGCGTAGGCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCCTTCCGCGACACAAACTCACGGTAGGAGGCGACCA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGGCGACAGTTGCGCGGGAAGTGGGCTTGACGGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGCTGCGGGCAGACCGGTACGGACAAAACCAGCACGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTCGACCGGAACGCGCTGGCAGTAGAATTCGGGCAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGGCGTTGCGCCCGCTCAACTCAACTCCGCCGAT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGTTGGTCGATACGCTGGCGCTTGCGCTGGAGCAGC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AGAGAGACGTAGGAGGAGATCACGTGAACCTTCCA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TGGGCATCGTTGATTCCTCTCGTGTAGCACTTGAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCGCTGACTACGAGTTTTCAACGTCTGATGACGGAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCTGCGCGTTGTTGCACCAGCGCGCCCCGCGTCGGATC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC

>NC_009523|44|5|2321726-2325131|CRT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GGTCGAAGTCAAAAGGCGGGCAAGCGACGGATCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCCCGACTAACTCATCAAGCACGCGCCGGGGCATCAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCAGCATCACGCGCGCCTTCAACACCGCGTAGGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTTGGCGACGTACAGCAGCGTTTCGCCCAGCCGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TGACAAGGATGGTTCATCGCCTGGCGCTGGATCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGACGATCGGCGTCAACCGCGCCTCCGGCAGCACG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCAACACCGAAGCGCGTCAAGTGCCCGACGCGCCCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCAGCATCAACTCCGCGACCGCTTGCGCATCGTTG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GGCGGCGACCAACTGGTCGAACAACATCGGCGCGCCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGAAGGCGTCGATGCGCGTGTCGATCACGCCGAACC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	AGTTGGAACCACCACTCCGCCGCCCGTCGGTCGCG
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCACGAGGTCGAAGAAGATGAAGAAGTACACCATC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGATTGCAGCCGCAGCGCTTTGTACAGCAGCGCTT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CTCTTCCAGTTCCGCTTTGCGCTCTGCGTCGCGCTTCTC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCGCCAAAACGTCGTTGGCGATCGGTTGAATAAAT
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GTCGGTCTGGCGAAGAAACTGCACTGCGAACTGAGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGATGCGCTGTTCCATTGCGGCGTAGTCGGCGTTC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	GCGATACGCGCTCGAAGATCGGAATGAAAACGTCCA
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	CGCGTGGCGGTCGAGCGGCGCGTCCGGCGGCAGATGCGC
ATTTCGGCAATTTCGACTCGTTGAAGAGTACTGAAAC	TCTGTCCAGCGCGCGTAGACCGCAAACGGGTGCGGCG
ATTTCGGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	ACCAGTAGTGATAGACGACCATCACACGCCTACAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GCCCGAAGATGGCTTGCAACGCCTTGAGTGCTTCGC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AGCCCTTCGGTTTCCGTTGCCGACAGAGCATGATCTGT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAAGCCGTACAAGGCAAACGGTTGCGGGTCAGG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAAGAGATCACGTATGTCCAGACGCACCCGCCGCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTCGATGATGCTGTTGTGGACGGCAGCGGAGATCTG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGTCCGCTAATCCTCGAGATCATCACTGGCTGGTACT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CCACAGACTCCCGGACTGCACCTCCAACCAATACG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGAGTTGGCGCTGCCGGTGCTGGAGCAAGATCAAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GTCCGTCGCCGCCAGCTCCCGCGCCACGCTGCGAATGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGATCACCAGTTCGATCGCCACATCCCTGAGTTCAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AAAGTAAGTTCTGCCCCTGTTAGAGCGCCCCACCAGAC
ATTTCAGCAATTTCGACTCGTTGAAGAGCACTGAAAC	GGCAGGGCTGTACCGTCGCCCGGCACGCCGTACCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGCGAGGGGAGTACGAACTCAAACGACACATCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CCTGAAACACTGATAGCGCCCCCAGTCGGGGCGCTAT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TAGTTTTGAGAGAGTTGGGCTTTGCGCTGGCGTAGGCG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCCTTCCGCGACACAAACTCACGGTAGGAGGCGACCA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGGCGACAGTTGCGCGGGAAGTGGGCTTGACGGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	GGCTGCGGGCAGACCGGTACGGACAAAACCAGCACGA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTCGACCGGAACGCGCTGGCAGTAGAATTCGGGCAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGGGCGTTGCGCCCGCTCAACTCAACTCCGCCGAT
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	CTGTTGGTCGATACGCTGGCGCTTGCGCTGGAGCAGC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	AGAGAGACGTAGGAGGAGATCACGTGAACCTTCCA
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TGGGCATCGTTGATTCCTCTCGTGTAGCACTTGAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCGCTGACTACGAGTTTTCAACGTCTGATGACGGAG
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC	TCTGCGCGTTGTTGCACCAGCGCGCCCCGCGTCGGATC
ATTTCAGCAATTTCGGCTCGTTGAAGAGCACTGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956616.1|2333425_2334856_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl|CDD|184633
NC_009523.1|WP_041335079.1|2327382_2328051_+|ComF-family-protein	unknown	unknown	gnl|CDD|223970
NC_009523.1|WP_011956615.1|2332586_2333426_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl|CDD|273040
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|378256
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl|CDD|337605
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|273707
NC_009523.1|WP_011956612.1|2329509_2330886_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|223679
NC_009523.1|WP_011956617.1|2335148_2339417_+|N-6-DNA-methylase	unknown	unknown	gnl|CDD|380293
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl|CDD|274215
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	gnl|CDD|187796
NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514
NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_083763284.1|2326436_2326625_+|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl|CDD|273860
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	csx3	mkCas0115_csx3_CAS-I:CAS-III	gnl|CDD|187871
NC_009523.1|WP_011956614.1|2331721_2332579_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009523.1|WP_011956611.1|2328059_2329493_-|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009523.1|WP_011956613.1|2330882_2331575_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cls000029_cas8b2_CAS-I-B	4.1e-255	841.6	0.2
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	5.7e-34	112.6	0.1
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	6.5e-20	66.0	0.0
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	3.4e-83	274.2	0.0
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	5.5e-15	50.3	0.1
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	2.6e-83	274.4	0.0
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	1.6e-70	233.0	0.0
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	csx3	mkCas0115_csx3_CAS-I:CAS-III	3.2e-68	224.4	0.0
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	8.3e-53	174.2	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956616.1|2333425_2334856_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl|CDD|184633	PRK14338, PRK14338, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NC_009523.1|WP_041335079.1|2327382_2328051_+|ComF-family-protein	gnl|CDD|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	1.88076e-49
NC_009523.1|WP_011956615.1|2332586_2333426_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	5.01783e-14
NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	7.68934e-34
NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	1.70251e-14
NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	0.000474164
NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	4.05375e-71
NC_009523.1|WP_011956612.1|2329509_2330886_-|AAA-family-ATPase	gnl|CDD|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	1.08918e-10
NC_009523.1|WP_011956617.1|2335148_2339417_+|N-6-DNA-methylase	gnl|CDD|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	1.34343e-08
NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	2.16806e-51
NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl|CDD|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.52405e-13
NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.592e-16
NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_083763284.1|2326436_2326625_+|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.80795e-07
NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	2.81484e-28
NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	6.1165e-97
NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein	gnl|CDD|187871	cd09740, Csx3_III-U, CRISPR/Cas system-associated protein Csx3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small protein in some cases fused to Csx1 (COG1517) family domains.	5.42096e-10
NC_009523.1|WP_011956614.1|2331721_2332579_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.65069e-08
NC_009523.1|WP_011956611.1|2328059_2329493_-|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	1.19543e-161

Protein sequences

>NC_009523.1|WP_085979421.1|2320561_2321619_-|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_011956608.1|2315804_2316401_+|CRISPR-associated-protein-Cas4
MSDSTFEVTDLRQWAYCPRVVYYQYCLPDIRPVTKLMEAGQEEHRAESGREERRSLRTYGLKTGERFFDVPLRSETLGLRGRVDLVIAIPDRRQATEIVVVEYKSTEGKAGPHVKLQLTAYALMIEEAWGIPVKRGFIYHMPERKAEAVTISAALRTRVKETVAAIRATVDHERMPPPPASRRQCAVCEFRRFCNDVV
>NC_009523.1|WP_011956607.1|2315553_2315808_+|CRISPR-associated-endonuclease-Cas2
MRCLLIYDIPDDRVRQKIADACLDYGLQRIQYSAFAGNLSRTHQRELMTEVRRRLGKHAGNIQLFTFPDDIWNARRTIEQGEES
>NC_009523.1|WP_011956606.1|2314535_2315549_+|CRISPR-associated-endonuclease-Cas1
MHLIVDQYGVFVSKHQGRIRVVKDKERLAEVPILHLEQIMICGDGIGLSSDVVRVCAEEGIPIHFVDSIGNDYGALMHGGITGMALTRRAQLRAGDDERGLMLAQAFASGKIQSQANLLRYAAKNRKESDPDLHHDLMRTATEILDTLPSVRAMRGVLTEETRAALMGFEGMSSARYWAAVARIIPDDLAWPGRETRGARDRFNQALNYGYGILQTQVRTALILAGLDPHAGFLHADRPGKPSLTLDLIEEFRQAVVDRTLIGLVNRQVEIGQGDDGLLDAATRKRIAEKILERLDSTEPYEGKRQPLRHILQCQARHIATFVRGERPTYEPFVMGW
>NC_009523.1|WP_011956605.1|2313296_2314256_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSLLTHHLQFTMVAATPLELGDNAGSAVRGALVNALLDRFCANKDAPTCVDCPLFNVCPVAALVAPMRETGETGGDQRPRPYVTRPPQPRRYAPDETLTFGLGLFGHAAELFPYVVIAAQGIERQGLGRRLQEQNGRRGRVRLLAIHAVNPLTGDRQPLFQADQRQVQVPGIPIGPAEVAAFAATLPENRLTLRFLTPMRLIDKGGLVKRPALRPLIQRLGIRLTDLAAAYGDGPLPAADARALLPLAESATLEYDNTRWIDITSYSRRSGERTPIGGMVGEAVFTGNLGPLREILVWGSLVHVGKNAVKGDGWYVVEG
>NC_009523.1|WP_011956604.1|2310910_2313262_+|CRISPR-associated-helicase/endonuclease-Cas3
MKPLPWPDWMDHLLAKSKRYGGETLAGHTWDVLCRLADLYRLRPHLTDDTRLWHCLYWSAFLHDFGKAAQGFQRRLRGGPKWAHRHEVLSLAFVDAIAHDLNEAEQRWVVAAIVSHHRDATEIAELYPSGLRRDPLIDLCNELDAETVAHLLRWIAECANRWRDLLGLTADVGAIDPQPCSVGAQRVRYWLRMYHDWVDTLDGEGSDARRPGILLRGLITSADHMASAHLRRLPPPIRLSWQDVAMRCNLSPDQVYPHQRQSAGQSAQSALLMVPTGSGKTEAALSWALGDGRNPPARIFYTLPYQASMNAMYDRLRQTFGDDVVGLQHGRATQALYARFREGDEWSATAARRAQWEKNLNLLHARPLKVLSPYQLLKALFQLRGFEAMLTDYAHAAFIFDEIHAYEPERLALITGLMRYLREHFAARFFVMSATFPELIRSHLRTALGDTPLIRATPDIFDRFRRHQLCLRDGELTDPATITEIVEAVRNGKQVLVCANTVARAQMVRDLLTHAGLTDEHLILIHSRFTYGDRSRLEQAIGARCRSNSANRSPLALVATQVVEVSLDIDLDVLYSDPAPLEALLQRFGRVNRKAAKGICPVYVFRQPDDGQGVYGRDRDPERSGRIVRVTLAELEQHDGAIIDEATINEWLDRIYADPLLNQQWRDAYQRMAHQVDLIIQGIRPFQSDEQREDEFERMFDGVDVVPQCFERDYVHLLVEERFIEANDYLVSISKQRFAILRNQGKLRPAEETDQRRVWVAQTPYDARNGLSFGDRVVDMDWI
>NC_009523.1|WP_011956603.1|2310195_2310933_+|type-I-B-CRISPR-associated-protein-Cas5
MQALKIVLEGVTTSFRYPHFMLGVQPGFPLPPPATIYGHVCSALGEWFDPEGVAFAYHFTVAGEGYDLEHIHVLSASSGKLPGGERKALEGNINPFKRQILLFPRLTLYLNRPEWIDAFRRPRYPVVLGRSQDLASYTRIEIVELQPAEQVYFEHTLLPYSMAAQAPAGVVTLMPRWIDYRQRRRPGFARYLMLTERITTKHMLRFGQQTPVYWSDPTVPMVDGLPLGLWFHTFVGADNETLTVA
>NC_009523.1|WP_011956602.1|2308675_2309767_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAFVTGLLLIDAPASALNNLGSIPGEREENTVGVKMITTKTGNFPYVSAQAFRYWLRTTLEQRVPEWRASPIFREEKIAYTDANPIRYWDDDLFGYMRAPGKADTARKSREQISLLEDATPVKETVTRASPFRVSTLVSIAPVNPTSDFGVMSRHEGNPVPHEHQFYRATLKGLFSLDLWACGTFSYRNRTGFRNLDDERVRLVADVSGVEHLKDEQSYRLPKDQRIARVKALFSGLAQLEGGAKQTLHYTDVSPALVIFAVTDGGNHIFHHTVGANRSGLPEIKIDALREALRVFADSIRSPVYVGWVRGYLDEARAGFEQFVAEHNAVAAKEGLPVITVSHPREAFMAFVAACDEHPEWLD
>NC_009523.1|WP_011956601.1|2307163_2308657_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MITYTGHPFVDTGFAVITAFVRKRRFADLADDDFQQIADYIEANYVRQPLRSFLTVAFTSNAWFAQSAFNPDRPDLSPEKQTEAREKRQYWADRHLRQWQQSAAALETCLFTGLPAAGLELSQKLQPGRVGRAQMPLLQGDDAINFFINGDPGLPMAAEAILALQAMPLGCAKVGGGLLAVHCDDEALTIAFATRFLQRNLNDVAKAQAAGEKKLPGSPRSLKTLLVETLTEILIRQIQEEERRARRPAITAYYFNNGQSPFLEIYHLPLQITGFLLAVHTPAYRAIWNELVQRGWQRAGISGKQGKAVDPVEPHFNYLYEDLFTLPAQAARFVRTYFLRIPDLRRSADDPRREYSPRREADLVSWPLVELFAQEVLLMTDDRVTKLKELGDKLADYTRYQGGKRFFRQFFVEQRSDNFLSLLNKANIDYTRYKRGQETLFDLDSFLTIFMEGDEVLRKDWRLMRDLVLIRMVEQLRDWIAGNPDAIPAEEEVAANE
>NC_009523.1|WP_011956600.1|2305634_2306828_+|hypothetical-protein
MNPFPAVVIGGPPHSGKSVLTYLLTRQLRALRVEHYVLRACPDGEGDWSQEAPPERVRLLRQKGQFSQDFVDRVCRDLAQRHLPLIVDVGGKPTPDQERILDQCTHAVLISANEAGLKEWRDRFERHGLPIIAELHSVLIGEDCIEAEIPVLRGQIANLERFTGVGGLMVEALAQQLQCLMTYTDADLKTYHCSHAPTELVVDVDHLAWWVELPEQQHWLPAYLARALTYAPKGTPLSIYGRGPNWLYAALALHAAPHQVYLFDPRMGWVAPVTLHCTPAATADAVAWKIEPFPTHTWIELTPTQPYLDYDDVNGTALPALDPSHGVVLSGKLPFWLLLGAALAYCHHPWLGIVQAQQYDECIVVMSRDAAYQPGACFRFRTDPHHGTTIGSMTQER
>NC_009523.1|WP_041333414.1|2326206_2326440_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTIYSFTVVIEPDEQGFHAYVPALPGCHTFADTVDEARTNILEALELHLHSMLEDGEPVPVEREPVFITRLSVPVAV
>NC_009523.1|WP_083763284.1|2326436_2326625_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MSEKLPRIDCQELIRALERAGFVKKRQKGSHLHMWREADKKRMISRSPGEDRTAGVAARYSS
>NC_009523.1|WP_041335079.1|2327382_2328051_+|ComF-family-protein
MLCAGNAMMLFRWIDHLLSLLLPDRCVGCGQLGALLCDACRRRLVAYDGDLPRVADQLTGVQVAYVFDGALRQAVHQLKYRSRQRMARPLGALLADHLRAHPLPCDALIPVPLHPHRLAERGFNQAELLAREVAGVTGLPVIVGPLVRIRATRQQALLDTPGRIENVAGAFVWQGPPPPARVVLVDDVLTTGATVNACAQALRAGGARDVYALALARSRRST
>NC_009523.1|WP_011956611.1|2328059_2329493_-|CpaF-family-protein
MSLLKRIGGSQPQSTEPSTAVSAPTGAPASAPDNAATPRATVTSSGGDVSQQRMLELSLWIVDRILSSLGNQQELKRSPEMERQLQEKFTLAYRQSGVNLTDEQTRQLYDMVMDELFGFGPIEPLLRDDSISEVMVNGPRSVYVEQKGKLTLTSVRFANDEHVLKVIDRIIRPLGRRIDRKWPMVDARLPDGSRVNAIIPPCAIDGPSITIRKFAKKKLTVEDLIRFGSMTPEMAEFLRACVVSRLNIIVAGGTGSGKTTLLNVLSNFIPPDERIVTIEDSAELKLAQEHVVRLESKPPEIDGTGRVTINDLVINSLRMRPERIVIGECRGGETMAMLQAMNTGHDGSLSTLHANSPRDAIARMETMAMMAGMDIPLRVIREQIASAIDLIVQQTRLEDGSRKIAYITEVQGMEGDVVVLQDIFVLQILGKTPEGKIISELRPTGTRPRFTPRLEAHGFKLPPSIFGATVPGQKRPW
>NC_009523.1|WP_011956612.1|2329509_2330886_-|AAA-family-ATPase
MSFFSQQFAGKQQAASPSGASGSVSVPPEPASIEETGLSMGFLNDLVLKVVYFHGNITGQQIAEVTKLPFFGVLDKVLEFLKLEEYVDIVGAQGGFNERSFQYVIATKGRLKVHEVLDRSQYAGPAPVPLDQYIAMVHRQSVGDMVVDAKTVRQAFAHLVVSDRMLDRIGPAANSARSLFLYGPPGNGKTTIAEGIANMLGGHVLIPYAVEVDGQIIKVFDPLNHQLIEQPATAAAREPAVNFEGRPVVDSPLPDRRWLVCKRPRVMVGGELILEQLELIFDPIAKVYEAPYQMKANGGLFLIDDFGRQKCRPQDLLNRWIVPLEKKVDFLALQTGKKIQVPFDVLIVFSTNLSPQDLVDDAFLRRIRHKIEVPNPSPEEFRAIFQRVAKAKNIPYSDEGLRYLILERYKRDGRDLRSCHPRDLCDQILDEAKYRGIPPSMSRELLDRAYDAYFVKLS
>NC_009523.1|WP_011956613.1|2330882_2331575_-|hypothetical-protein
MEARIDEKGKFFTPRITKDAVTAFVRTAGKIIVGSVYVRPGNRLTDELNNDPSSFLPITDVRVYDADDERFQFQSSFILAAYREILLISELDALATIRDVPWNAPSAEPTPLIREDDDLGVHINERGKYFTVRTPKDAVLCAVRGGDLAVLGYLYVRPDRRLKDELNDEQARYLPMTDVRVFRVSDNMLLYHASFLLIGRHAIDIVAPIDAVTGASNVPWLPIRSTEGEG
>NC_009523.1|WP_011956614.1|2331721_2332579_-|tetratricopeptide-repeat-protein
MTLTKQDEKFRLQRRLQNQAVELAVNNRWEEAVQVNQKLISLAETTETYNRLGKAYFELGRLAEARDAYRNALRLTPNNRIARRNLERIEELLARSASLSGGLKAGRQLVDLRLFITEVGKTALTSLIDVQRGPALAAVVTGEKVELRPEGRGVAVYDMSGALIGRIEPKLAQRLNELMAGGNRYIAAVAHIDGRQVRIIIREIYQSPSQRGRVSFPGKLSESALRGGFISGAQFDEFGEELLEEEEGVEVREEVEEEVFGGEEEELGLEEIEPDIGDEDDLIEE
>NC_009523.1|WP_011956615.1|2332586_2333426_-|CPBP-family-intramembrane-metalloprotease
METLHPPAPRLPLPGAPRAAIGALVADLLIAIGMALILSVAVVGVMIGLRAAQTGLDVNALGQLNPQEITRLIGVDGMLTLLLLQNLVFIGVAVIRVRALRREPLAVLGFSAPQPLRLALFGVGLGVLALFVNGIVGMIFVSAGIRQNQAALYPLFPGDYLGQALFFVGAAILAPIGEEVLFRGYLFGSLRRLAGDSRAGIVIAYGVSALVFALAHSLAASEGVIALLVPSFLIGLVFAWGFDRSGSLLPGIVAHALNNSIAFAALLTCINNPGVCPQV
>NC_009523.1|WP_011956616.1|2333425_2334856_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTEVVHLHMPEEARATQSRDATPRERRYYVWTVGCQMNVSDSERLEAALQGVGYAPAERPEDASFIVLNSCSVRASAEERILGKLSEVQRLKRKHPDTKVVLWGCMVGPGNQSIFQSRLPMVDHFVSPSAVDEVLALAPNPIYQLEEPALPVARWDHPPVSVHVPIQYGCNMSCSFCVIPLRRGRERSRPLDEIVEECRRIVARGAKEITLLGQIVDSWGHDLPGRPDLADLLRAVHDIPGLLRLRFLTSHPAWMTDRLIAAVAELPRCMPDINLPVQAGDDALLKIMRRGYTVQRYRDLIAKIRDAIPDVSLTTDVIVGHPGETRERFEGTKRLLEDIRFDKVHIAAFSSRPGTRAADMELDPTLAVPEGEKQLRRIELERLQEQIAAERNARFLHQTVEVLVEGEHKGKWRGRTPGNKLVFFSDPDDWTGRLARVIITHTGPWSLQGVLARSDETFARVNGALHAVAAANGAAV
>NC_009523.1|WP_011956617.1|2335148_2339417_+|N-6-DNA-methylase
MAIPSSIYPSLRLEGGLFSPDLIEALTTADLPGQKPPDFRLPPGRSLTGEIAAAFNDARALWQVFQNRLERLPADDPATSATREFWVIPFLRLLGYDLRFNSRALEVDGAPFPISHALGADQSQDHAGAEAPVPVHIVGCRQELGRVAPAARPRLSPHALVQEYLNRSEALWGIVTNGRTLRLLRNSTFVRRQAYVEFDLAAIFADEGRFADFVLLYRLLHRTRLPSDGRAPADCLLETYYQQAVEQGGRVRERLRDGVEQAIVILANGFLRHPASVALRATLQTWRGEGATASSSPSEAVHAEHVQRQGEGADALYHQLLRLVYRLLFLLTAEERGLMGGDPLYRDHYGVGRLRRLCTRRTAYTDHDDLWLSLRALWLVLTDERMARLLDAPPLNGELFAHQELDDASIANRDLLRAFWHLAFYREGDAPPRRVNYAALDTEELGSVYESLLDYHPAITFDTRGRPTFVLTFGSERKATGSYYTPPSLVNELVQSALAPVLEERLRPCRTAREKEAALLALNVLDPACGSGHFLLAAARRLGKELARIRTGEDEPAPERVREAIRDVVAHCIYGVDRNPLAVELARVALWLESHAEGKPLTFLDHRIKCGDSLVGVLDLEALREGLPDDAFAPVVGDDRKLAANLKRRNRTEREGQLTLFDAPIDHDLSPLAETVRRIETIRDDTPDQVHRKRATYEAWRTDPHLRRLSNACDLWTAAFFQALAPHPRPTAPDAPASPAQNPERIITTDAIRRVLAGQPIAANLLGEAQALAAEHRFFHWPLEFPEVFAFHPQPHQGGTASGGFDVVLGNPPWERIKLQEEEFFAVRDPQIARAANAAARKRLIAALPQTNPALWEAYQRALHAAESASRFLRGSGQYPLTGRGDINTYSVFAERVRSLLNVRGRAGIIVPTGIATDATNQFFFADLADKGQLASLFDFENRQRLFPAVDSRMKFCLLTLAGSWQPTPAGVREAAPMVFAFFATHADHLRDPRRVFTLTADDIARINPNTRTLPVFRTRQDADLTRAVYRRVPVLVNEHTGENPWGVRFLRMFDMSNDSHLFRTRAELEQQGYRLVGNRLIKDGSIYLPMYEGRLGFQFNHRYATQPSGNLQVVSLSQLQEACFLVEPQFFVDQNDFKTRMGRLRLSCVTGLLGYRRISNNTNERTVVASIIPWGPASYGWILSLGPDAAGLSLLCATYNSLVFDYLLRQSLSQPSIPQSTFEQVAALPPTAYTPADLAFIVPRVLELTYTAWDLKPFADDVWNEADDELRAAIHAAWEANRIAAGGHEWRLPSWISAYPEIEANPQKGIPFPPFRWDEDRRAVLRAELDAYYARLYGLTRKQLRYILDPADLTERELADILDPWEEVRDPLDPAGYAARVAASTFPGETFRVLKEKELRQFGEYRTRRLVLEAWEQLERR

Crispr_ID: NC_009523_45

• CRISPR_ID: NC_009523_45
• CRISPR_location: 2362722-2362803
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: DinG

Consensus repeat of NC_009523_45

Consensus_repeat	Method
CCTTTCATTCCTGGCGTTGAACGTTC	CRISPRCasFinder

spacers of NC_009523_45

>45.1|2362748|30|NC_009523|CRISPRCasFinder
AACGTTGTAATGTTCAACGCTTAACGTTAA

CRISPR arrays and Neighbor proteins around NC_009523_45

CRISPR arrays

The CRISPR arrays of NC_009523_45

>merge|NC_009523|45|2362722-2362803|CRISPRCasFinder
CCTTTCATTCCTGGCGTTGAACGTTCAACGTTGTAATGTTCAACGCTTAACGTTAACCTTTCATTCCTGGCGTTCAACGTTC

>NC_009523|45|42|2362722-2362803|CRISPRCasFinder
CCTTTCATTCCTGGCGTTGAACGTTC	AACGTTGTAATGTTCAACGCTTAACGTTAA
CCTTTCATTCCTGGCGTTCAACGTTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_083763364.1|2359847_2360078_-|DUF4160-domain-containing-protein	unknown	unknown	gnl|CDD|379344
NC_009523.1|WP_011956645.1|2371874_2373122_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	unknown	unknown	gnl|CDD|235076
NC_009523.1|WP_011956640.1|2366737_2367853_-|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase	unknown	unknown	gnl|CDD|237458
NC_009523.1|WP_011956643.1|2369161_2369983_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	unknown	unknown	gnl|CDD|237293
NC_009523.1|WP_011956638.1|2361411_2362713_-|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009523.1|WP_157041024.1|2362838_2366729_-|magnesium-chelatase-subunit-H	unknown	unknown	gnl|CDD|237117
NC_009523.1|WP_011956632.1|2353525_2354992_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|236901
NC_009523.1|WP_011956634.1|2356598_2359469_+|DNA-polymerase-III-subunit-epsilon	DinG	COG1199_DinG_CAS-IV-A	gnl|CDD|236148
NC_009523.1|WP_011956630.1|2352582_2352984_-|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|341361
NC_009523.1|WP_011956644.1|2370003_2371710_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	unknown	unknown	gnl|CDD|235085
NC_009523.1|WP_011956646.1|2373264_2374065_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009523.1|WP_011956631.1|2353041_2353350_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956635.1|2359530_2359836_-|DUF2442-domain-containing-protein	unknown	unknown	gnl|CDD|378424
NC_009523.1|WP_049767586.1|2360266_2361400_-|magnesium-chelatase-ATPase-subunit-I	unknown	unknown	gnl|CDD|131085
NC_009523.1|WP_011956648.1|2377313_2378282_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956647.1|2374081_2375455_-|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009523.1|WP_011956642.1|2368457_2369171_-|magnesium-protoporphyrin-IX-methyltransferase	unknown	unknown	gnl|CDD|236059
NC_009523.1|WP_011956633.1|2355565_2356351_+|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl|CDD|259851
NC_009523.1|WP_011956629.1|2351971_2352586_-|hypothetical-protein	unknown	unknown	gnl|CDD|236090
NC_009523.1|WP_041333426.1|2367914_2368244_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011956634.1|2356598_2359469_+|DNA-polymerase-III-subunit-epsilon	DinG	COG1199_DinG_CAS-IV-A	9.1e-142	468.3	0.4

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_083763364.1|2359847_2360078_-|DUF4160-domain-containing-protein	gnl|CDD|379344	pfam13711, DUF4160, Domain of unknown function (DUF4160).	3.91177e-18
NC_009523.1|WP_011956645.1|2371874_2373122_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	gnl|CDD|235076	PRK02842, PRK02842, ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N.	0
NC_009523.1|WP_011956640.1|2366737_2367853_-|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase	gnl|CDD|237458	PRK13654, PRK13654, magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional.	0
NC_009523.1|WP_011956643.1|2369161_2369983_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	gnl|CDD|237293	PRK13185, chlL, protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional.	0
NC_009523.1|WP_011956638.1|2361411_2362713_-|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.83219e-140
NC_009523.1|WP_157041024.1|2362838_2366729_-|magnesium-chelatase-subunit-H	gnl|CDD|237117	PRK12493, PRK12493, magnesium chelatase subunit H; Provisional.	0
NC_009523.1|WP_011956632.1|2353525_2354992_+|GAF-domain-containing-protein	gnl|CDD|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	4.5055e-69
NC_009523.1|WP_011956634.1|2356598_2359469_+|DNA-polymerase-III-subunit-epsilon	gnl|CDD|236148	PRK08074, PRK08074, bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.	0
NC_009523.1|WP_011956630.1|2352582_2352984_-|CBS-domain-containing-protein	gnl|CDD|341361	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain. The putative Acetoin Utilization Protein (Acub) from Vibrio Cholerae contains a CBS pair domain. The acetoin utilization protein plays a role in growth and sporulation on acetoin or butanediol for use as a carbon source. Acetoin is an important physiological metabolite excreted by many microorganisms. It is used as an external energy store by a number of fermentive bacteria. Acetoin is produced by the decarboxylation of alpha-acetolactate. Once superior carbon sources are exhausted, and the culture enters stationary phase, acetoin can be utilised in order to maintain the culture density. The conversion of acetoin into acetyl-CoA or 2,3-butanediol is catalysed by the acetoin dehydrogenase complex and acetoin reductase/2,3-butanediol dehydrogenase, respectively. Acetoin utilization proteins, acetylpolyamine amidohydrolases, and histone deacetylases are members of an ancient protein superfamily.This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria. Acetoin is a product of fermentative metabolism in many prokaryotic and eukaryotic microorganisms. They produce acetoin as an external carbon storage compound and then later reuse it as a carbon and energy source during their stationary phase and sporulation. In addition these CBS domains are associated with a downstream ACT (aspartate kinase/chorismate mutase/TyrA) domain, which is linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulation of the linked enzyme. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	9.40674e-46
NC_009523.1|WP_011956646.1|2373264_2374065_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.00724e-29
NC_009523.1|WP_011956633.1|2355565_2356351_+|DDE-type-integrase/transposase/recombinase	gnl|CDD|259851	cd00569, HTH_Hin_like, Helix-turn-helix domain of Hin and related proteins. This domain model summarizes a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed helical bundle. The principal DNA-protein interface is formed by the third helix, the recognition helix, inserting itself into the major groove of the DNA. A diverse array of HTH domains participate in a variety of functions that depend on their DNA-binding properties. HTH_Hin represents one of the simplest versions of the HTH domains; the characterization of homologous relationships between various sequence-diverse HTH domain families remains difficult. The Hin recombinase induces the site-specific inversion of a chromosomal DNA segment containing a promoter, which controls the alternate expression of two genes by reversibly switching orientation. The Hin recombinase consists of a single polypeptide chain containing a C-terminal DNA-binding domain (HTH_Hin) and a catalytic domain.	0.000124662
NC_009523.1|WP_011956635.1|2359530_2359836_-|DUF2442-domain-containing-protein	gnl|CDD|378424	pfam10387, DUF2442, Protein of unknown function (DUF2442). This family of bacterial and fungal proteins has several members annotated as being putative molybdopterin-guanine dinucleotide biosynthesis protein A; however this could not be verified. Hence the function is not known. This family also includes the DUF3532 that was found to be related and was merged into this family. Members of this family also fall into the NE0471 N-terminal domain-like superfamily, a family of proteins with a unique fold in SCOP:143880.	8.56023e-11
NC_009523.1|WP_049767586.1|2360266_2361400_-|magnesium-chelatase-ATPase-subunit-I	gnl|CDD|131085	TIGR02030, Magnesium-chelatase_subunit_ChlI, magnesium chelatase ATPase subunit I. This model represents one of two ATPase subunits of the trimeric magnesium chelatase responsible for insertion of magnesium ion into protoporphyrin IX. This is an essential step in the biosynthesis of both chlorophyll and bacteriochlorophyll. This subunit is found in green plants, photosynthetic algae, cyanobacteria and other photosynthetic bacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	1.19743e-177
NC_009523.1|WP_011956647.1|2374081_2375455_-|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.51587e-123
NC_009523.1|WP_011956642.1|2368457_2369171_-|magnesium-protoporphyrin-IX-methyltransferase	gnl|CDD|236059	PRK07580, PRK07580, Mg-protoporphyrin IX methyl transferase; Validated.	3.96202e-125
NC_009523.1|WP_011956629.1|2351971_2352586_-|hypothetical-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	3.57589e-05
NC_009523.1|WP_011956644.1|2370003_2371710_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	gnl|CDD|235085	PRK02910, PRK02910, ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B.	0

Protein sequences

>NC_009523.1|WP_011956638.1|2361411_2362713_-|BCD-family-MFS-transporter
MTLFKNIRLGLLHVAIAMTFVLINSVLNRIMIHDLNILASIVAVLVVLPYVLSPAQVWIGQYSDTHPIFGYRRTPYIALGTLLAITGAALAPHAALALAREPLIGVPLAVLLFGMWGVGYNLAVVAYLSLASDMSTEQQRSRTVAIMWFMMITSVIVTAIVVGRALEPYSEERLFTVFLETGGVALALALVGLIGLEPRRTTATVQQSRAGQMAAIRAIIGNPQARFFFVYLIMLLAAILGQDVLLEPFGAQAFGMNVKETTQLTAMWGGATLTALLLYGAVLSRWISKKRGAMIGGSIAATGFLLIALSGMLAIEAMFIPGILLLGFGTGIATTTNLALMLDMTTAEQVGLFIGAWGVADAIARGVGTLLGGVMRDVIAHMSGSAVSGYVSVFLIEAMLLGISLVLLQRIDVTAFRSRQPSLTELVAITGDA
>NC_009523.1|WP_049767586.1|2360266_2361400_-|magnesium-chelatase-ATPase-subunit-I
MTGSSSETHNGRETDSVPTTLPVYPFTAIVGQAELKLALLLCVIDPTIGGVMVMGHRGTAKSTAVRALAALLPPQRAVAGCPYGCDPAAPSPICPHCSAPDQHTTKNGQEKRRAGAKRPPSILRPVPVVDLPLGATEDRVVGALDIERALVEGVQAFAPGLLARANRGFLYIDEVNLLEDHLVDLLLDVAQSGVNVVEREGISVRHPARFVLVGSGNPEEGDLRPQLLDRFGLHARITTIDDVAERVEIVKRRRAFDADPVAFAQQWEREQQRLQRRIRAAQKRLSSVELTDEALYAAARLCVALNIDGHRGELTLARAAVALAAFEGRDSAQPSDIARVATLSLRHRLRKDPLETSGDDTRIERAVAETIGAAARA
>NC_009523.1|WP_083763364.1|2359847_2360078_-|DUF4160-domain-containing-protein
MYVEPGVPHHVPHFHVYYQNHAAVYSIDPIERISGELPRRQQRLVEAWAELHQGELRESWERLQAGQAPHKIAPLH
>NC_009523.1|WP_011956635.1|2359530_2359836_-|DUF2442-domain-containing-protein
MEHLICRVIGFEITGPYTLRIAFDDGMVREINFEPVLEGPVYGMLRDEELFKQVHIDAEVHTLVWPNGADFDPETLYNWPKYADEMKRMAERWATMMAKVE
>NC_009523.1|WP_011956634.1|2356598_2359469_+|DNA-polymerase-III-subunit-epsilon
MNQIYIAIDVETTGLEAGVDEIIEIAAVKFNADEVLETFSTLVQPVHSLPLNSSRLTGITADMLASAPRFAEVAPRFAAFLKNYPLVGHNVEFDLRMLRAQGMRLPQPAFDTFELATLLMPRTPAYRLSALAATLGIHHDEAHRALSDADVTRQIFLYLLRRIEALPLDDLNEIMRLTSQIEWGLRSLFEEAQRAKARRVFVDAIPIQADRYDDRDEKIVPLKPTGDERPIDLADIRRFFSPDGALGRAFAGYEQRDQQVRMSEAVADTFNQGGALIAEAGTGTGKGLAYLVPAALHAARRGERVVISTNTINLQDQLFFKDIPALQQVMSNGADEAPFTAALLKGRSNYLCLKRYKDLRRDQRLMSDDVRALLKVQLWLPTTESGDRAELPLHEGENASWNRMSAAWEQCTGPRCSEFQRCFFFKARKQAEAAHLVIVNHALLMADLAVENDVIPPYDYLIIDEAHNLEDVATDQLSFNVDREGLLAFLDDIFTEGQAQVVGGLLSELPNHFRESMATRTDIDRADAIADTLRPAVARARDAVYGCFNVLMTFIKREAELTAYDSRLRITDSLRRKPSWAEVERAWDALSVALHAVGEGLGRLETLLIDLKDAELLEYDALMLRVQALRRYATDVRVNIGHILTGGAEEKVTWLTHDRMRDTLTLSAAPLSVADVLRTNLFEAKTATILTSATLSVGGNFAFIRERIGLDHAEELTLDSPFDYTRQALLYIPQDIPEPNQNGYQRALEQAIIDLARATGGRMLVLFTATNALRQTYRAIQEPLEDAGIAVLGQGIDGSRRSLLERFKEFPGTVLLGTSSFWEGVDVVGDALSVLVIAKLPFSVPTDPIFAARSEQFDDPFNQYAVPQSILRFKQGFGRLIRSREDRGVVAVLDRRLLTKKYGQMFLESLPHTTVRSGPLQRLPDLAKRFLAVGNGAINGAPGATATASEMKRTQR
>NC_009523.1|WP_011956633.1|2355565_2356351_+|DDE-type-integrase/transposase/recombinase
MTSGQRARVQHLHRAGMSQSALARQVGVHRRTIQRWIARPDTADRTGGLRTHGRRVVTDVYRDAVIAEWQAHPRHGPKRSAQDWRLRVPTANTATVWRILHAAGLTRCPPQKKRQRRPIPVGRHRVQLDIQELPAIRGSRGREDTIRLIPLRTRMKSTEIHPPGASRRSAGVLRRAIGRLPPFHLAGTDTAMGVTMAHAPHPERRTAFERTVADMGVRHWRITPRSPWQNGIIERSNRTDTAEWFHQQECSCSDHRRYGHR
>NC_009523.1|WP_011956632.1|2353525_2354992_+|GAF-domain-containing-protein
MKQQSVSPRRGRTSSANGQQEEVAHLRAELAAAHARIAELDAQLAASVRQTRLVNERLNTILTVSAALLITHEIDTVMQVVVREAVHLFPDTSGALLFLVDQAGMRLRLAASSSGQTGVPVLRPGQGPAGRAFLSPRAMLIAGPALEEALSELSETQRAQERGALTYWPPSSALLTPLRIEDTRLGALVVYGNQNPHLIHPRDIPFAQALADLTAVAIAEHRQRTRAAALQRDLDQTQSLHAEAQARLSAAQAQLLQSAKLAAVGELAASVAHEINNPLYAARNSLYLVEQDMPPDAPQRHFLTIAQNELGRIARIITRMRDFYRPARDELELTEVNDLLAETIELVQTHLRHGHVTVTASFCPNLPLLVAHPDQLRQVFLNLMLNACDAMPNGGQLHISTELSCRNERDEQWVVVAVRDTGVGINPEHMPHLFEPFYTTKPQGTGLGLAISAHIVTQHGGHIQVESTPGVGSTFTVLLPVDRGVEEA
>NC_009523.1|WP_011956631.1|2353041_2353350_-|hypothetical-protein
MPRRKRQHPLIKVARAYLSEHQPALKEAPLRIHLLDGPPGSPRYAVSIEQCRANGCPYEVPPEDAASGRCPIIDCPVRHSIRLLFDRNGKLVNASESGIHWG
>NC_009523.1|WP_011956630.1|2352582_2352984_-|CBS-domain-containing-protein
MSQPPICAPETMTLPEARRLMHKSRIRRLPVLDSAGRLTGIVTEGDINRISASHAHDVREYNLYHRAADLPLRDFMTRPVITVGPDEPIIAVAQLLLLHRISGVPVVEGDRVVGVITESDLFRRMVEREVAAE
>NC_009523.1|WP_011956629.1|2351971_2352586_-|hypothetical-protein
MNECGAGIPARHSTAAPPVRAPRPCAPTAPLRPDCAAAPPSASTGAAWLRPYHPPPAAPLRPDCAAAPPSASTGAAWLRPYHPPPAAPLRPDCAAAPRLRRCAPTAPLRHPAASTGAAALRPDCAAAPPSASTGAAWLRPDCAAAPPSASTGAAWLRPYHPPPAAPLRPDCAAAPRLRRCAPTAPLIVVLIEVEPARTIAARAG
>NC_009523.1|WP_157041024.1|2362838_2366729_-|magnesium-chelatase-subunit-H
MHRIPSRNHKDSAMRFIFLTMDGNHFAALRKGAELLRRDEGIALSLGCYDTNALRTGADWQRLADDVAACDFVFGSMLFGEEFVRPLERVLERAHAPVCIITSNPALIRKTCIGHFDLRKKVEEQEASLLSRWMHKFRPKNGRGEGQRQLALMRNLGRVLQHIPGKARDLATYIAVHQYWMHSSPENLRRMLAMLIERYVPGYQGRLKVLPPIEYPDVALLHPDAPEPFGDEREYAQWLAQRSRRRKGETVKGTVGLLTLRTVALSGNMAHLHALYRALEQRGLEVRMAYAAGLDFRPAIERFFMERQAQHHWFGAAKTPRHPRRATVDVLVNGVGFALVGGMAASQPEEAVAALSDLDVSYLSLVPLSFQRVEEWQRDDAGLSPIQVAMNVALPELDSATEPLVFGGPTAGSDQFVPLPDQIELAAGRIERHVALRRTPNHAKKLALVLFNFPPNLGNAGTAAYLDVFASLHRLLLALRDAGYTVEVPETPDELRYRVVQQNAELFGTPGNVAARLSVADYRRLFPAYAAIEPFWGAAPGELLNDGRDFFICGHMFGNVFVGLQPSFGYERDPMRLLMAKDAAPNHAFAAFYTWLTHVFGAHAVVHFGTHGALEFMPGKQAGLSAQCWPMRLLGPLPNIYYYSVNNPSEGTIAKRRSAATLVSYMVPPLQQAGLYKGLRRLKDTLDAYRARPDPGMLADIRAQAEQLGIGSESPDAANDEAYVASLAHELIQIEQRMIPVGLHVLDKDPDPAELADVLALVAAFARPPGVEHPLTHLVAAALGRDYGRLQAALRHDPCAQETFQQIDTIVRDAVRALVDEYRSRESSASPPVATFERLLQQRAHLPTDALRRFRAYLEALLDRMVHDHELCNLLHALDGGYIPPSPGNDVVRNPAAVPTGRNIHGLDPYRVPTPAAQATGERLVADLLARLTREQGRMPESVAIVLWGTDNLKSDGEGVAQALALMGARPVTDELGNVSDVTLIPLEELGRPRVDAVITVSGIFRDLFAHQMRLLDKAARLAAHADEPPEWNYVRKHALAHAAELGISLDDAAIRVFSNAPGSYGANVNHLVESSTWNSDAEMSEAFVARKSFTLDARGEWRDARAIMERALATVDATFQNVDSFEIGISDIDHYYEYLGGVTKSVEKLRGARPRVLVAEALATTGERISTLEQQVRIETRAKLLNPKWFEAMLAHGYQGVHEIEARVSNTYGWSATADAVEGWVYQGVAETFILDEAMRERLASLNPHAATAIAGRLLEAHSRGFWNADEATLEALQAIYADLEDRLEGVAVGC
>NC_009523.1|WP_011956640.1|2366737_2367853_-|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase
MMNIPGEYTPTTRHALREAILNPRFYTTDFRAIDRLNVAHMRDEFDWIRNEFEVDYNRKHFVRNDEFLANFDDMPARDLFIEFLERSCTAEFSGCLLYAEMVKHLHDPTLKAIFRCMSRDEGRHAGFLNKTMADLGVEMNLQVLHTRKKYTYFQPKFIFYSVYLSEKIGYARYITIYRHLQKYPQGMIHPIFKWFEKWCNDEYRHGEFFSLLMRSQPDLLRGGNLRWIRFFLLAVYATMYLNDARRAGFYQALGLDWRDYDQRVIRLTNHIATQVFPVTLPVDDPRFFRHLDACVTYDAQIRALEGRSDPIATAQRARLGAAIAARLLATYRLPVVPTTDANRWQGLEGFPNYPGPGWKQDATLNQRVISA
>NC_009523.1|WP_041333426.1|2367914_2368244_-|hypothetical-protein
MKRWFLPLLALVAGAVWLWYRRETVLEGEGVVHLQSEHEHFHLHVDLPQGMEIEPGDTLEILTVPKTHGQTNGEITYPSRIRLTKASSLRRELVRRSSLVEINELVEHP
>NC_009523.1|WP_011956642.1|2368457_2369171_-|magnesium-protoporphyrin-IX-methyltransferase
MAMTDVSQHKQQLRDYFDGDGFQRWSAIYGEAEVSRVRRTIRVGHNRMLARAEAWLLEWVSATGRDPHTLNALDAGCGTGMFSTTLAQHGFSVTAVDIAPQMTAATAERVRAAGVAQRVTCLTGDIDAVAGTFDVVACFDVLIHYPQPAFDQLIAHLADCTRGLLLFTYAPYEPLLAAMHWIGGFFPRANRRTEIQMIREDDVRRAVGAHGLHVGRIEPIRSGFYHVNLVEAVHVER
>NC_009523.1|WP_011956643.1|2369161_2369983_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein
MSLTLAIYGKGGIGKSTTSSNLSAALALKGAKVLQIGCDPKHDSTFALTGTLQPTVIDVLTEVDFHHEEVSVEDVVHTGFAGVDTLESGGPPAGSGCGGYVVGETVKLLHEFGLYDKYDVIVFDVLGDVVCGGFSAPLNYADYGIIIACNDFDSIFAANRLCLAIKQKSARYRVELAGIIANRVDYELGGGTTLLEQFAETVGTRIIGRVPYHDLIRRSRLMGKTLFEMEGPGKEECTAPFLEMAEELLNRPRSTVPKPLGDREIFNVIGGWR
>NC_009523.1|WP_011956644.1|2370003_2371710_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B
MRLALWMYQGTAHHGVGRIANSMRGVHAVFHAPQGDDYVNPIFTMLERTPDFPRMTTSIVSGRDLAQGTVRLPETLRAVDAQVHPDLIIVCASCSTILLQEDLERMARSAGTSAEVLVYDANPYRMQEVRSADGLLTTLVQRFARPQAPLPTPSVNILGPASLGFHNRSDLICLRRMLATLGVQINVVAPLGASIHDLERLPAAWATIAPYRELGQNAARWLEDQFGIPALTDAPIGVQPTLRWLRRLVETLNEAGARLQRLSTPLRLPPLTAFSLDGMSAPSSVPWFARTADMESYSMKRAFVFGDATHTVGMVKFLRDELGMQIAGAGTYLEEEAEWVYQELKEYLPPDDSGSPKSSFLATDVFQHVARRIADLSPELVCGTQMERHACRKLDIPCLVIAPPTHIENHLLSYRPVLGFDGADVLADAVYTTATLGMEKHLIDMFGDAGLDYDEPQTGEPRTENQELRVENRASANGHPEAGVSVGAAEPSAAPSRSVVTEESNRATTPSSSTVHPVWTPDAQAMLKKIPFFVRGRVQKNVERYAMQHGYATITAEVLVEAREALGG
>NC_009523.1|WP_011956645.1|2371874_2373122_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N
MPATVIREDGAYHSFCGLTCVGWLYQKIKDSFFLVLGTHTCAHLLQNVLGVMIFARPRFGVALIEEADLSKQQPELDRIIDEIVADHHPSVIFLLSSCTPEVMKVEFDGLARAVSRPNLPVLFVPASGLDYTFSQAEDSVLQALLPFCPVAPPDDRRVVFLGSVNDAIADDFRTEAARLGIPVAGFLPESHFHDLPPIGPGTVVAPLQPYLAKVAGRLARERGATVVSSLFPFGPDGTRAFWEDVAAAMGIAVDLRERERQAWERLEPHLDVLRGKKVFFTADNLMELPLARFLRHAGCTILECSSPYINRKFHARELEALDGVRVVEQPNFDRQLRDIQELRPDLVISNLATTNPLVGHGVVAKWSTEFSFMPIHGWSGAATLAGMFTRPLKRHAQLDPLMDDPLWVAGLMPAR
>NC_009523.1|WP_011956646.1|2373264_2374065_-|class-I-SAM-dependent-methyltransferase
MTDVLPIRFDAIAGNYDSVRGHPPEVAEQIGRAIAAVAGTHARVLELGVGTGRIALPVATAGCRVVGIDISEEMLRMARAKDHGQALWLLQGTIEHLPFADGVFDATLAVHVLHLARDWRTALAEALRVLRPGGVFIQGRDWRDPQSCVGRLRSKLRETLIELLPGSRPPGAGAAVGQALTKLGATVEPEMVAATWVAPISPAQVLDEMESRSDAETWVLDDATLHAAIQRLRAWAESVYDDVQQPEMVERRFVIQVARRGVKVEG
>NC_009523.1|WP_011956647.1|2374081_2375455_-|BCD-family-MFS-transporter
MNLLRAIGRFLLGALKVLRLALPKLGVGWMFALLTSNFNRVSIVELGVMAIIVTTMIGLHHFLSPFQVVWGRIADSHPVFGLRRTPYLLIGATVASLVFLALPSVAVAMGEGSVLAIVAGYALLILFGVSIAAMGDCHHALIAEVTNPRTRGGVIAVVWTFTIMSTIIAATVIKAQMPSYTPEAMQALYNLTPLVVIGSALLGVLGIEKRLSREELAVALERARAAAPPGNPLRAAVGLFRQNPQVRAFFGFVFLSIVGIFLQDSILEVFGAEVFHMTIRETTTFTQTWGGGVLGGMLIMGLLSSIFPIGKKVIALIGGVGTAFGLGLLAACALTEQRSLLNPAIMLMGFSTGLYNVGALSLMMDMTVEGATGLYMGMWGMAQAFGTATANILAGALHTVLIEAQVLGQTLGYGVIFGLEAVLMVIGIALLSGVSVEAFRGLTRTDLTRAMEAGAVA
>NC_009523.1|WP_011956648.1|2377313_2378282_-|hypothetical-protein
MPWCRIRTNVLKPEKETAMAIGRNKIRQFTDAMTIQWANGKNEARLTPGVGRFVSHVGWYAEVGRDDEFDRFVYQAGIPQMEIRHPRQGATAQIVRHWNLGERLRFFPLTSGPVATTVAASLSARNVAATIEAGIGLRWGRGEGERSKMAIRGYLQILRRGTDETGGEWLLYPRLVQISVRSRMTDELLAALVDHVRVCEIADTLVDRAKHPDVIHCYELALPLGPGQEEQWGKGETATVMPMTSLHPETIDLPYLRTLWRPDQVVELALRDWPDVQAWAHEFSLGGYTEPTGQTPAPVDDAYTGDEAIAANGRSVYAGDAL

Crispr_ID: NC_009523_46

• CRISPR_ID: NC_009523_46
• CRISPR_location: 2382937-2383027
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_46

Consensus_repeat	Method
TGGAACCGACCCGTCGCTCGCGGTTGGTAT	CRISPRCasFinder

spacers of NC_009523_46

>46.1|2382967|31|NC_009523|CRISPRCasFinder
TCGCTCAGGTCGGCGTAGGTTTTGAGCCAAA

CRISPR arrays and Neighbor proteins around NC_009523_46

CRISPR arrays

The CRISPR arrays of NC_009523_46

>merge|NC_009523|46|2382937-2383027|CRISPRCasFinder
TGGAACCGACCCGTCGCTCGCGGTTGGTATTCGCTCAGGTCGGCGTAGGTTTTGAGCCAAATGGAACTGACCCGTCGCTCGCGGTTGGTAT

>NC_009523|46|43|2382937-2383027|CRISPRCasFinder
TGGAACCGACCCGTCGCTCGCGGTTGGTAT	TCGCTCAGGTCGGCGTAGGTTTTGAGCCAAA
TGGAACTGACCCGTCGCTCGCGGTTGGTAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956657.1|2387266_2387932_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl|CDD|223692
NC_009523.1|WP_011956648.1|2377313_2378282_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956643.1|2369161_2369983_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	unknown	unknown	gnl|CDD|237293
NC_009523.1|WP_011956652.1|2383212_2384382_+|ACR3-family-arsenite-efflux-transporter	unknown	unknown	gnl|CDD|213563
NC_009523.1|WP_011956656.1|2386452_2387256_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|180561
NC_009523.1|WP_011956642.1|2368457_2369171_-|magnesium-protoporphyrin-IX-methyltransferase	unknown	unknown	gnl|CDD|236059
NC_009523.1|WP_011956655.1|2385966_2386389_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956646.1|2373264_2374065_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009523.1|WP_011956660.1|2389532_2390057_-|energy-coupling-factor-transporter-S-component-ThiW	unknown	unknown	gnl|CDD|370540
NC_009523.1|WP_011956650.1|2379368_2381072_+|hypothetical-protein	unknown	unknown	gnl|CDD|274305
NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|234590
NC_009523.1|WP_049767499.1|2381102_2382890_-|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl|CDD|223732
NC_009523.1|WP_011956659.1|2388474_2389536_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213192
NC_009523.1|WP_011956647.1|2374081_2375455_-|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009523.1|WP_011956649.1|2378365_2379235_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|178419
NC_009523.1|WP_011956658.1|2387928_2388420_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase	unknown	unknown	gnl|CDD|236477
NC_009523.1|WP_011956645.1|2371874_2373122_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	unknown	unknown	gnl|CDD|235076
NC_009523.1|WP_011956653.1|2384466_2385291_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009523.1|WP_011956644.1|2370003_2371710_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	unknown	unknown	gnl|CDD|235085

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956657.1|2387266_2387932_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl|CDD|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.4568e-20
NC_009523.1|WP_011956647.1|2374081_2375455_-|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.51587e-123
NC_009523.1|WP_011956643.1|2369161_2369983_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein	gnl|CDD|237293	PRK13185, chlL, protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional.	0
NC_009523.1|WP_011956652.1|2383212_2384382_+|ACR3-family-arsenite-efflux-transporter	gnl|CDD|213563	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein. The Arsenical Resistance-3 (ACR3) Family (TC 2.A.59) The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport. [Cellular processes, Detoxification, Transport and binding proteins, Anions].	1.25355e-160
NC_009523.1|WP_011956656.1|2386452_2387256_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl|CDD|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	2.42157e-143
NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase	gnl|CDD|234590	PRK00043, thiE, thiamine phosphate synthase.	1.38534e-83
NC_009523.1|WP_011956646.1|2373264_2374065_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.00724e-29
NC_009523.1|WP_011956660.1|2389532_2390057_-|energy-coupling-factor-transporter-S-component-ThiW	gnl|CDD|370540	pfam09512, ThiW, Thiamine-precursor transporter protein (ThiW). Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.	1.01873e-50
NC_009523.1|WP_011956650.1|2379368_2381072_+|hypothetical-protein	gnl|CDD|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	5.59923e-47
NC_009523.1|WP_049767499.1|2381102_2382890_-|SulP-family-inorganic-anion-transporter	gnl|CDD|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	1.40077e-126
NC_009523.1|WP_011956659.1|2388474_2389536_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	3.02118e-78
NC_009523.1|WP_011956649.1|2378365_2379235_-|alpha/beta-fold-hydrolase	gnl|CDD|178419	PLN02824, PLN02824, hydrolase, alpha/beta fold family protein.	5.71927e-25
NC_009523.1|WP_011956642.1|2368457_2369171_-|magnesium-protoporphyrin-IX-methyltransferase	gnl|CDD|236059	PRK07580, PRK07580, Mg-protoporphyrin IX methyl transferase; Validated.	3.96202e-125
NC_009523.1|WP_011956658.1|2387928_2388420_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	2.38007e-43
NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase	gnl|CDD|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	9.6592e-139
NC_009523.1|WP_011956645.1|2371874_2373122_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N	gnl|CDD|235076	PRK02842, PRK02842, ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N.	0
NC_009523.1|WP_011956653.1|2384466_2385291_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.36805e-06
NC_009523.1|WP_011956644.1|2370003_2371710_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B	gnl|CDD|235085	PRK02910, PRK02910, ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B.	0

Protein sequences

>NC_009523.1|WP_049767499.1|2381102_2382890_-|SulP-family-inorganic-anion-transporter
MTESDDRHLQGDPLPVRGWQRWAPGLHRLRTYPRAWLRDDLSAGLVLTTMLVPVGMAYAQAAGLPAVHGLYATIAALLAYAIFGPSRFLVLGPDSSLAPLIAATVLPLAHGDPQRAVALAGMMAIVVGLICIGAGVARFGFVTELLSKPIRYGYMNGIALTVAVSQMPVLLGFSVAGDHLIERFWSLIQGIAAGRINWIAFLLGAGALAMIFAFRRQTRIPGMLVALIIATLAVTLFDLDSRAGVVVLGEIPPGLPAPMLPWIGIDGMAPIVIGSVAVALVAFADTSVLARAYAAKTGDRVDPNQELIGLGAANLAAGFFQGFAISSSASRTPVAEAAGARTQVTGMVGAGAIVGLILLAPSLLHNVPVAVLAAIVIVSALGLVQIADLRRIYRIQRWEFWLSMACLAGVALLGVIQGIGLAIVIAIIEFLWDGWRPHSAILGRVDGIKGYHDITRYPQARLIPGLVIFRWDAPLFFANAEYFRSRVLDAVAASPTPVRRVVVAAEPVTSVDVTAADMLADLDDALSQAGIELCFAEMKDPVKDKLKRFGLFTRFGEQLFFPTIGEAVSAYVRTFEVDWVDWEDRQMMETGPPTP
>NC_009523.1|WP_011956650.1|2379368_2381072_+|hypothetical-protein
MRFVTLALIAILGTGIVPAKVHAAQQDGQGRIVFAASRGDGGAFDIFSADLAGERVVNLTADPHPDRSPSWSPAGDRIVFASRRASNWDLYVMRADGSDLRRLTEHPAYDGEPAWSPDGRQIAFTSMRDGQLDIYTLDLDSGDLRRITSHPSADSQPTWAPDGRRLAFTSWRDSNQEIYITDVEGSTIVNLTNHPAPDHSPAWSPDGRFIAFISDRDGGGNLHIADLVTGEERRAGPDNLGLRDPAWTPGGGLMAVAPWALGERRFFSRQGVALFTPGLSGGTFVVASVHGYNRPAWSNRAIAPSLPDDRWQDGRSFAAATAPVDTASLPRGMTPLGDVRAGGLPVLAAAVKPSFDALRQEVIEASGYDFLGQLSEASRAVDFQNGTSSFTSWHKAGRAFDTRWDYRVNGQQILFISPEWRAGRLFWRLYLRAARQDGRMGEPLAAPVFDAHNRRLLPPPAGYFVDFTALAAAHGWNRIAAQERETFDWRTQPLALEYWHFERRDGLSWYQAMRLVHDDQTLERIFTRERVLAAGARPNFLPFLGLPWAQLPPPVAGPITLPPGYRQ
>NC_009523.1|WP_011956649.1|2378365_2379235_-|alpha/beta-fold-hydrolase
MRNNGYPVDAPRQFYRWRGYRVACYTAGAGPAILLIHSINAAASSFEMRRPFAALRTDHRVFALDFLGFGGSDRPQRIYCADDYIDLIGDFVRDTVGRGAVVIASSLGAAYTIRAAARDADLFGPLILICPTGMRNLVHPQQPGLAYRTLASPFGDLVFRLLASRSSIAYFLRAQSYYDPAVVTDELIEGFYRAAYQAGAKWAPICFLTGLLNCDVRDAFGQLRQPILLVWGRQADLTPLRSADDFLARNPRARLAVVDKARLSVQDERPEEFIHLVREFLAAPHPSVP
>NC_009523.1|WP_011956648.1|2377313_2378282_-|hypothetical-protein
MPWCRIRTNVLKPEKETAMAIGRNKIRQFTDAMTIQWANGKNEARLTPGVGRFVSHVGWYAEVGRDDEFDRFVYQAGIPQMEIRHPRQGATAQIVRHWNLGERLRFFPLTSGPVATTVAASLSARNVAATIEAGIGLRWGRGEGERSKMAIRGYLQILRRGTDETGGEWLLYPRLVQISVRSRMTDELLAALVDHVRVCEIADTLVDRAKHPDVIHCYELALPLGPGQEEQWGKGETATVMPMTSLHPETIDLPYLRTLWRPDQVVELALRDWPDVQAWAHEFSLGGYTEPTGQTPAPVDDAYTGDEAIAANGRSVYAGDAL
>NC_009523.1|WP_011956647.1|2374081_2375455_-|BCD-family-MFS-transporter
MNLLRAIGRFLLGALKVLRLALPKLGVGWMFALLTSNFNRVSIVELGVMAIIVTTMIGLHHFLSPFQVVWGRIADSHPVFGLRRTPYLLIGATVASLVFLALPSVAVAMGEGSVLAIVAGYALLILFGVSIAAMGDCHHALIAEVTNPRTRGGVIAVVWTFTIMSTIIAATVIKAQMPSYTPEAMQALYNLTPLVVIGSALLGVLGIEKRLSREELAVALERARAAAPPGNPLRAAVGLFRQNPQVRAFFGFVFLSIVGIFLQDSILEVFGAEVFHMTIRETTTFTQTWGGGVLGGMLIMGLLSSIFPIGKKVIALIGGVGTAFGLGLLAACALTEQRSLLNPAIMLMGFSTGLYNVGALSLMMDMTVEGATGLYMGMWGMAQAFGTATANILAGALHTVLIEAQVLGQTLGYGVIFGLEAVLMVIGIALLSGVSVEAFRGLTRTDLTRAMEAGAVA
>NC_009523.1|WP_011956646.1|2373264_2374065_-|class-I-SAM-dependent-methyltransferase
MTDVLPIRFDAIAGNYDSVRGHPPEVAEQIGRAIAAVAGTHARVLELGVGTGRIALPVATAGCRVVGIDISEEMLRMARAKDHGQALWLLQGTIEHLPFADGVFDATLAVHVLHLARDWRTALAEALRVLRPGGVFIQGRDWRDPQSCVGRLRSKLRETLIELLPGSRPPGAGAAVGQALTKLGATVEPEMVAATWVAPISPAQVLDEMESRSDAETWVLDDATLHAAIQRLRAWAESVYDDVQQPEMVERRFVIQVARRGVKVEG
>NC_009523.1|WP_011956645.1|2371874_2373122_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-N
MPATVIREDGAYHSFCGLTCVGWLYQKIKDSFFLVLGTHTCAHLLQNVLGVMIFARPRFGVALIEEADLSKQQPELDRIIDEIVADHHPSVIFLLSSCTPEVMKVEFDGLARAVSRPNLPVLFVPASGLDYTFSQAEDSVLQALLPFCPVAPPDDRRVVFLGSVNDAIADDFRTEAARLGIPVAGFLPESHFHDLPPIGPGTVVAPLQPYLAKVAGRLARERGATVVSSLFPFGPDGTRAFWEDVAAAMGIAVDLRERERQAWERLEPHLDVLRGKKVFFTADNLMELPLARFLRHAGCTILECSSPYINRKFHARELEALDGVRVVEQPNFDRQLRDIQELRPDLVISNLATTNPLVGHGVVAKWSTEFSFMPIHGWSGAATLAGMFTRPLKRHAQLDPLMDDPLWVAGLMPAR
>NC_009523.1|WP_011956644.1|2370003_2371710_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-subunit-B
MRLALWMYQGTAHHGVGRIANSMRGVHAVFHAPQGDDYVNPIFTMLERTPDFPRMTTSIVSGRDLAQGTVRLPETLRAVDAQVHPDLIIVCASCSTILLQEDLERMARSAGTSAEVLVYDANPYRMQEVRSADGLLTTLVQRFARPQAPLPTPSVNILGPASLGFHNRSDLICLRRMLATLGVQINVVAPLGASIHDLERLPAAWATIAPYRELGQNAARWLEDQFGIPALTDAPIGVQPTLRWLRRLVETLNEAGARLQRLSTPLRLPPLTAFSLDGMSAPSSVPWFARTADMESYSMKRAFVFGDATHTVGMVKFLRDELGMQIAGAGTYLEEEAEWVYQELKEYLPPDDSGSPKSSFLATDVFQHVARRIADLSPELVCGTQMERHACRKLDIPCLVIAPPTHIENHLLSYRPVLGFDGADVLADAVYTTATLGMEKHLIDMFGDAGLDYDEPQTGEPRTENQELRVENRASANGHPEAGVSVGAAEPSAAPSRSVVTEESNRATTPSSSTVHPVWTPDAQAMLKKIPFFVRGRVQKNVERYAMQHGYATITAEVLVEAREALGG
>NC_009523.1|WP_011956643.1|2369161_2369983_-|ferredoxin:protochlorophyllide-reductase-(ATP-dependent)-iron-sulfur-ATP-binding-protein
MSLTLAIYGKGGIGKSTTSSNLSAALALKGAKVLQIGCDPKHDSTFALTGTLQPTVIDVLTEVDFHHEEVSVEDVVHTGFAGVDTLESGGPPAGSGCGGYVVGETVKLLHEFGLYDKYDVIVFDVLGDVVCGGFSAPLNYADYGIIIACNDFDSIFAANRLCLAIKQKSARYRVELAGIIANRVDYELGGGTTLLEQFAETVGTRIIGRVPYHDLIRRSRLMGKTLFEMEGPGKEECTAPFLEMAEELLNRPRSTVPKPLGDREIFNVIGGWR
>NC_009523.1|WP_011956642.1|2368457_2369171_-|magnesium-protoporphyrin-IX-methyltransferase
MAMTDVSQHKQQLRDYFDGDGFQRWSAIYGEAEVSRVRRTIRVGHNRMLARAEAWLLEWVSATGRDPHTLNALDAGCGTGMFSTTLAQHGFSVTAVDIAPQMTAATAERVRAAGVAQRVTCLTGDIDAVAGTFDVVACFDVLIHYPQPAFDQLIAHLADCTRGLLLFTYAPYEPLLAAMHWIGGFFPRANRRTEIQMIREDDVRRAVGAHGLHVGRIEPIRSGFYHVNLVEAVHVER
>NC_009523.1|WP_011956652.1|2383212_2384382_+|ACR3-family-arsenite-efflux-transporter
MSHTSTTVPHSTPSVTRQLSALDRYLTLWIFLAMALGVGLGYFLPGVEQFINRFQVGTTNIPIAIGLVLMMYPPFAKVKYEELGEVFRNTKVLGLSLIQNWVVGPILMFGLAIIFLRDYPEYMVGLILIGLARCIAMVIVWNELAKGDTEYAAGIVAFNSLFQVFFYSIYAWVFITVLPPLFGMQGSIVRIGIVQIAESVFIYLGIPMIAGFLTRFILLRARGREWYERVFVPRISPLTLIALLFTIVLMFSLKGELIVQIPLDVVRIAIPLLLYFVLMFLVSFWIGYRLGADYRKTTTLSFTAASNNFELAIAVAVAVFGIGSGAAFAAVIGPLIEVPVMIGLVNVAFWFQRRYFAHEAQPADVLLQTTAEAGCGSPVRDPGQRTANR
>NC_009523.1|WP_011956653.1|2384466_2385291_-|CPBP-family-intramembrane-metalloprotease
MTVYPSEAPRQGLVHQYPVVVFFLIAYAFSWTIGGLLIADYQGALSVPGALHYVSAFGPMVAAIVVTALISGRPGLLDLWRRGMRADVGWRWWLIGVGTPVALGVAAIVVFWLSNGVLPDLALFGEVDYLGAIGALAALALWIATYGFGEEVGWRGFAFHRMEGGGWVQAAVMIGVLWGLWHLPYFFYKANFIALGIGGFAGYLISITMGSILLSWMYRGSGRSILVVALWHGLFDFVSASPIAEGVGNALISSVVIVWVIVILWLARRDRASA
>NC_009523.1|WP_011956655.1|2385966_2386389_+|hypothetical-protein
MDKQQHITFGQAPRIALWIGLLMLLTGLVIRYILGERGVNTLIPTLLGMPISMLGFVALEPEYASGAMRGVTALALLGVLLTFNVVPQLNAVLLGQPPTSSVITLVTNTLTLVLCGALLCVCLIAFGWVWYKRRATRTGE
>NC_009523.1|WP_011956656.1|2386452_2387256_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MIPRALTIAGSDSGGGAGIQADLKTFMAHGVYGASAITAITAQNTVGVHAVLMLEPSLVVAQIEAVLDDIGADAVKTGMLGNASIIQAVADTLERYRVERLVIDPVMVAKSGARLLEEDAIATLRARLLPLALVVTPNLPEASVLLNRPVTDERDMQDAARDLHTLGPRYVLLKGGHLSGSDVVDLLYDGERFVTLRAPRLETNHTHGTGCTYAAAIAALIARGLPVEQAVRQAHAYLQDAIVHAPAIGKGYGPVNHLVYGLPVSRG
>NC_009523.1|WP_011956657.1|2387266_2387932_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MNCSTTSRFDPRAKALAYLIGSATIILTTDLVRLALITGVTGALLIGLGLERRWLQVMRILLPTLLLFALVAGWSGGYEAAIGAALRLIALVSAGIVFFSVTPPEELGDALLASGVPSQMTFLLEGALRFTPLMGALARDVYDAQASRGIRFDGWHLLHNGPLLLTPLLLSVMRFADDLAEGLETRGFGSPHRTPLGDYRVRWQDWALVGATLFVMILMML
>NC_009523.1|WP_011956658.1|2387928_2388420_-|ABC-transporter-ATP-binding-protein
MLFAPTVQDELETGPRALNRLDRTWLARVIERCHLEPLLHRSPHRLSAGEQRRVAIAAILASRPSILLLDEPTAGQDALNRQALRALIADVAGDGMTVVIATHDTEWAYHLCNRWAVLDHGSVVACDAPSAICAQPTIIEQARLRLPAEEALRQKAMRIVARV
>NC_009523.1|WP_011956659.1|2388474_2389536_-|ATP-binding-cassette-domain-containing-protein
MNPLVVCDGVTYRYRDGTLALHQVSLTIEEGEFVILAGASGSGKSTLCRLFNGLIPHLYSGDLSGRALVAGQDVRSTPPYVLSRSVGLALQNPEAQSLATTVARDLALGPACQGLDCATIAERVHEVAALLAIDPLLDRQVSALSGGEVQRVAIAGVLALHPRLLALDEPFAFLDAAGGGRLRETLRMLHRRGVTIVVAEHRLAEVADLATRLIVLHEGQVVADGMPRSVLACDVSQWNLELPPLVCLARAAGLAATPLTLDEALDIAPSLARRLSSQNNAPAVSPAIIWEDVSFARGNRLILHQARLSAAPRDIVGLLGANGAGKTTLLRLGNGLLRPQRGIVRVQGRPIGR
>NC_009523.1|WP_011956660.1|2389532_2390057_-|energy-coupling-factor-transporter-S-component-ThiW
MAATTSIVRGQTRRLAYAIVLTALAVALSPISIPVGIAKVFPVQHMVNVLAGALVGPWWGLAVALVTSIIRNALGLGTPLAFPGSIFGVLLAGLIYRATRNIPLTVAGEVIGTGIIGALVGALAVAPYVMNRPMGATALIIPFALSSLVGAVLGALGLLALRRTGYLERPDGTQ
>NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase
MDPINQRIGDMLARIRATRPLIHHITNLVVMNDTANVTLHVGGLPVMAHDAEEVAEMVAHAGALVLNVGTLSPDWIESMLIAGRRANELQTPVVLDPVGAGATQLRTRTNLELLRSLRIAVVRGNGGEIGALSGEGGEVKGVESVSGPEDPLTAARRLAQTYHTVVALTGARDIITDGERVLTVNNGHIWLTTLTGTGCMATTMVAAFAAVERDYLLAAAGGLAMFGLAAELAAEKAHGPASFKVALFDQIYNLTPEQVANGARVVEGGS
>NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase
MVLSTLIEPLPSVQSDPIPFPSGGGIVYVITDRRAAGERALTDIVSAALRGGAHVIQLRDKDVPARDMVALGQALLPLTRDAGVPLIVNDRVDVALALDADGVHVGQDDIPAEMVRRIIGPERILGVSVATVEQAQRAMDAGATYVSVGDLFGTPSKPDAGPPIGLEPLAEIARTVNLPVLGIGGINLANAASVIRAGAVGVAVISAVIGAPDPEAATRALHAVIASALDERARAG

Crispr_ID: NC_009523_47

• CRISPR_ID: NC_009523_47
• CRISPR_location: 2390322-2390489
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_47

Consensus_repeat	Method
CAACGTACAACGTGCCACAACCTCCCCACCTTCAACCTTCAACGT	CRISPRCasFinder

spacers of NC_009523_47

>47.1|2390367|78|NC_009523|CRISPRCasFinder
ACAACGTGCCACAACCTCCCCACCTTCAACCTTCAACGTACAACGTGCCACAACCTTCAACCTTCAACCTTCAACGTG

CRISPR arrays and Neighbor proteins around NC_009523_47

CRISPR arrays

The CRISPR arrays of NC_009523_47

>merge|NC_009523|47|2390322-2390489|CRISPRCasFinder
CAACGTTCAACGTGCCACAACCTCCCCACCTTCAACCTTCAACGTACAACGTGCCACAACCTCCCCACCTTCAACCTTCAACGTACAACGTGCCACAACCTTCAACCTTCAACCTTCAACGTGCAACGTGCAACGTGCCACAACCTCCCCACCTTCAACCTTCAACGT

>NC_009523|47|44|2390322-2390489|CRISPRCasFinder
CAACGTTCAACGTGCCACAACCTCCCCACCTTCAACCTTCAACGT	ACAACGTGCCACAACCTCCCCACCTTCAACCTTCAACGTACAACGTGCCACAACCTTCAACCTTCAACCTTCAACGTG
CAACGTGCAACGTGCCACAACCTCCCCACCTTCAACCTTCAACGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956668.1|2399751_2401170_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274522
NC_009523.1|WP_011956657.1|2387266_2387932_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl|CDD|223692
NC_009523.1|WP_011956665.1|2394104_2395484_-|HD-domain-containing-protein	unknown	unknown	gnl|CDD|182810
NC_009523.1|WP_011956666.1|2395732_2397358_+|DUF3459-domain-containing-protein	unknown	unknown	gnl|CDD|200470
NC_009523.1|WP_011956667.1|2397568_2398957_+|NERD-domain-containing-protein	unknown	unknown	gnl|CDD|377990
NC_009523.1|WP_011956652.1|2383212_2384382_+|ACR3-family-arsenite-efflux-transporter	unknown	unknown	gnl|CDD|213563
NC_009523.1|WP_011956656.1|2386452_2387256_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|180561
NC_009523.1|WP_011956655.1|2385966_2386389_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956663.1|2392511_2393402_-|zinc-metalloprotease-HtpX	unknown	unknown	gnl|CDD|320695
NC_009523.1|WP_011956650.1|2379368_2381072_+|hypothetical-protein	unknown	unknown	gnl|CDD|274305
NC_009523.1|WP_011956670.1|2402656_2403601_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_049767499.1|2381102_2382890_-|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl|CDD|223732
NC_009523.1|WP_011956659.1|2388474_2389536_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213192
NC_009523.1|WP_157041282.1|2401676_2402660_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011956658.1|2387928_2388420_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
NC_009523.1|WP_011956664.1|2393562_2394012_-|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|107221
NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase	unknown	unknown	gnl|CDD|236477
NC_009523.1|WP_011956660.1|2389532_2390057_-|energy-coupling-factor-transporter-S-component-ThiW	unknown	unknown	gnl|CDD|370540
NC_009523.1|WP_011956653.1|2384466_2385291_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|234590

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956668.1|2399751_2401170_-|FAD-dependent-oxidoreductase	gnl|CDD|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	1.02669e-55
NC_009523.1|WP_011956657.1|2387266_2387932_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl|CDD|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.4568e-20
NC_009523.1|WP_011956665.1|2394104_2395484_-|HD-domain-containing-protein	gnl|CDD|182810	PRK10885, cca, multifunctional CCA addition/repair protein.	9.60811e-65
NC_009523.1|WP_011956666.1|2395732_2397358_+|DUF3459-domain-containing-protein	gnl|CDD|200470	cd11331, AmyAc_OligoGlu_like, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomalto-oligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NC_009523.1|WP_011956667.1|2397568_2398957_+|NERD-domain-containing-protein	gnl|CDD|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	1.17457e-13
NC_009523.1|WP_011956652.1|2383212_2384382_+|ACR3-family-arsenite-efflux-transporter	gnl|CDD|213563	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein. The Arsenical Resistance-3 (ACR3) Family (TC 2.A.59) The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport. [Cellular processes, Detoxification, Transport and binding proteins, Anions].	1.25355e-160
NC_009523.1|WP_011956656.1|2386452_2387256_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl|CDD|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	2.42157e-143
NC_009523.1|WP_011956663.1|2392511_2393402_-|zinc-metalloprotease-HtpX	gnl|CDD|320695	cd07336, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase. This HtpX family of peptidase M48 subfamily B includes uncharacterized HtpX homologs and consists of proteins smaller than Ste24p, with homology restricted to the C-terminal half of Ste24p. HtpX expression is controlled by the Cpx stress response system, which senses abnormal membrane proteins. HtpX participates in the proteolytic quality control of these misfolded proteins by undergoing self-degradation and collaborating with FtsH, a membrane-bound and ATP-dependent protease, to eliminate them. HtpX, a zinc metalloprotease with an active site motif HEXXH, has an FtsH-like topology, and is capable of introducing endoproteolytic cleavages into SecY (also an FtsH substrate). However, HtpX does not have an ATPase activity and will only act against cytoplasmic regions of a target membrane protein. Thus, HtpX and FtsH have overlapping and/or complementary functions, which are especially important at high temperature; in E. coli and Xylella fastidiosa, HtpX is heat-inducible, while in Streptococcus gordonii it is not.	3.66359e-155
NC_009523.1|WP_011956650.1|2379368_2381072_+|hypothetical-protein	gnl|CDD|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	5.59923e-47
NC_009523.1|WP_011956670.1|2402656_2403601_+|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.121e-37
NC_009523.1|WP_049767499.1|2381102_2382890_-|SulP-family-inorganic-anion-transporter	gnl|CDD|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	1.40077e-126
NC_009523.1|WP_011956659.1|2388474_2389536_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	3.02118e-78
NC_009523.1|WP_157041282.1|2401676_2402660_+|HAMP-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	2.36925e-40
NC_009523.1|WP_011956658.1|2387928_2388420_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	2.38007e-43
NC_009523.1|WP_011956664.1|2393562_2394012_-|Hsp20/alpha-crystallin-family-protein	gnl|CDD|107221	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.	4.27019e-35
NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase	gnl|CDD|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	9.6592e-139
NC_009523.1|WP_011956660.1|2389532_2390057_-|energy-coupling-factor-transporter-S-component-ThiW	gnl|CDD|370540	pfam09512, ThiW, Thiamine-precursor transporter protein (ThiW). Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.	1.01873e-50
NC_009523.1|WP_011956653.1|2384466_2385291_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.36805e-06
NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase	gnl|CDD|234590	PRK00043, thiE, thiamine phosphate synthase.	1.38534e-83

Protein sequences

>NC_009523.1|WP_011956660.1|2389532_2390057_-|energy-coupling-factor-transporter-S-component-ThiW
MAATTSIVRGQTRRLAYAIVLTALAVALSPISIPVGIAKVFPVQHMVNVLAGALVGPWWGLAVALVTSIIRNALGLGTPLAFPGSIFGVLLAGLIYRATRNIPLTVAGEVIGTGIIGALVGALAVAPYVMNRPMGATALIIPFALSSLVGAVLGALGLLALRRTGYLERPDGTQ
>NC_009523.1|WP_011956659.1|2388474_2389536_-|ATP-binding-cassette-domain-containing-protein
MNPLVVCDGVTYRYRDGTLALHQVSLTIEEGEFVILAGASGSGKSTLCRLFNGLIPHLYSGDLSGRALVAGQDVRSTPPYVLSRSVGLALQNPEAQSLATTVARDLALGPACQGLDCATIAERVHEVAALLAIDPLLDRQVSALSGGEVQRVAIAGVLALHPRLLALDEPFAFLDAAGGGRLRETLRMLHRRGVTIVVAEHRLAEVADLATRLIVLHEGQVVADGMPRSVLACDVSQWNLELPPLVCLARAAGLAATPLTLDEALDIAPSLARRLSSQNNAPAVSPAIIWEDVSFARGNRLILHQARLSAAPRDIVGLLGANGAGKTTLLRLGNGLLRPQRGIVRVQGRPIGR
>NC_009523.1|WP_011956658.1|2387928_2388420_-|ABC-transporter-ATP-binding-protein
MLFAPTVQDELETGPRALNRLDRTWLARVIERCHLEPLLHRSPHRLSAGEQRRVAIAAILASRPSILLLDEPTAGQDALNRQALRALIADVAGDGMTVVIATHDTEWAYHLCNRWAVLDHGSVVACDAPSAICAQPTIIEQARLRLPAEEALRQKAMRIVARV
>NC_009523.1|WP_011956657.1|2387266_2387932_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MNCSTTSRFDPRAKALAYLIGSATIILTTDLVRLALITGVTGALLIGLGLERRWLQVMRILLPTLLLFALVAGWSGGYEAAIGAALRLIALVSAGIVFFSVTPPEELGDALLASGVPSQMTFLLEGALRFTPLMGALARDVYDAQASRGIRFDGWHLLHNGPLLLTPLLLSVMRFADDLAEGLETRGFGSPHRTPLGDYRVRWQDWALVGATLFVMILMML
>NC_009523.1|WP_011956656.1|2386452_2387256_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MIPRALTIAGSDSGGGAGIQADLKTFMAHGVYGASAITAITAQNTVGVHAVLMLEPSLVVAQIEAVLDDIGADAVKTGMLGNASIIQAVADTLERYRVERLVIDPVMVAKSGARLLEEDAIATLRARLLPLALVVTPNLPEASVLLNRPVTDERDMQDAARDLHTLGPRYVLLKGGHLSGSDVVDLLYDGERFVTLRAPRLETNHTHGTGCTYAAAIAALIARGLPVEQAVRQAHAYLQDAIVHAPAIGKGYGPVNHLVYGLPVSRG
>NC_009523.1|WP_011956655.1|2385966_2386389_+|hypothetical-protein
MDKQQHITFGQAPRIALWIGLLMLLTGLVIRYILGERGVNTLIPTLLGMPISMLGFVALEPEYASGAMRGVTALALLGVLLTFNVVPQLNAVLLGQPPTSSVITLVTNTLTLVLCGALLCVCLIAFGWVWYKRRATRTGE
>NC_009523.1|WP_011956653.1|2384466_2385291_-|CPBP-family-intramembrane-metalloprotease
MTVYPSEAPRQGLVHQYPVVVFFLIAYAFSWTIGGLLIADYQGALSVPGALHYVSAFGPMVAAIVVTALISGRPGLLDLWRRGMRADVGWRWWLIGVGTPVALGVAAIVVFWLSNGVLPDLALFGEVDYLGAIGALAALALWIATYGFGEEVGWRGFAFHRMEGGGWVQAAVMIGVLWGLWHLPYFFYKANFIALGIGGFAGYLISITMGSILLSWMYRGSGRSILVVALWHGLFDFVSASPIAEGVGNALISSVVIVWVIVILWLARRDRASA
>NC_009523.1|WP_011956652.1|2383212_2384382_+|ACR3-family-arsenite-efflux-transporter
MSHTSTTVPHSTPSVTRQLSALDRYLTLWIFLAMALGVGLGYFLPGVEQFINRFQVGTTNIPIAIGLVLMMYPPFAKVKYEELGEVFRNTKVLGLSLIQNWVVGPILMFGLAIIFLRDYPEYMVGLILIGLARCIAMVIVWNELAKGDTEYAAGIVAFNSLFQVFFYSIYAWVFITVLPPLFGMQGSIVRIGIVQIAESVFIYLGIPMIAGFLTRFILLRARGREWYERVFVPRISPLTLIALLFTIVLMFSLKGELIVQIPLDVVRIAIPLLLYFVLMFLVSFWIGYRLGADYRKTTTLSFTAASNNFELAIAVAVAVFGIGSGAAFAAVIGPLIEVPVMIGLVNVAFWFQRRYFAHEAQPADVLLQTTAEAGCGSPVRDPGQRTANR
>NC_009523.1|WP_049767499.1|2381102_2382890_-|SulP-family-inorganic-anion-transporter
MTESDDRHLQGDPLPVRGWQRWAPGLHRLRTYPRAWLRDDLSAGLVLTTMLVPVGMAYAQAAGLPAVHGLYATIAALLAYAIFGPSRFLVLGPDSSLAPLIAATVLPLAHGDPQRAVALAGMMAIVVGLICIGAGVARFGFVTELLSKPIRYGYMNGIALTVAVSQMPVLLGFSVAGDHLIERFWSLIQGIAAGRINWIAFLLGAGALAMIFAFRRQTRIPGMLVALIIATLAVTLFDLDSRAGVVVLGEIPPGLPAPMLPWIGIDGMAPIVIGSVAVALVAFADTSVLARAYAAKTGDRVDPNQELIGLGAANLAAGFFQGFAISSSASRTPVAEAAGARTQVTGMVGAGAIVGLILLAPSLLHNVPVAVLAAIVIVSALGLVQIADLRRIYRIQRWEFWLSMACLAGVALLGVIQGIGLAIVIAIIEFLWDGWRPHSAILGRVDGIKGYHDITRYPQARLIPGLVIFRWDAPLFFANAEYFRSRVLDAVAASPTPVRRVVVAAEPVTSVDVTAADMLADLDDALSQAGIELCFAEMKDPVKDKLKRFGLFTRFGEQLFFPTIGEAVSAYVRTFEVDWVDWEDRQMMETGPPTP
>NC_009523.1|WP_011956650.1|2379368_2381072_+|hypothetical-protein
MRFVTLALIAILGTGIVPAKVHAAQQDGQGRIVFAASRGDGGAFDIFSADLAGERVVNLTADPHPDRSPSWSPAGDRIVFASRRASNWDLYVMRADGSDLRRLTEHPAYDGEPAWSPDGRQIAFTSMRDGQLDIYTLDLDSGDLRRITSHPSADSQPTWAPDGRRLAFTSWRDSNQEIYITDVEGSTIVNLTNHPAPDHSPAWSPDGRFIAFISDRDGGGNLHIADLVTGEERRAGPDNLGLRDPAWTPGGGLMAVAPWALGERRFFSRQGVALFTPGLSGGTFVVASVHGYNRPAWSNRAIAPSLPDDRWQDGRSFAAATAPVDTASLPRGMTPLGDVRAGGLPVLAAAVKPSFDALRQEVIEASGYDFLGQLSEASRAVDFQNGTSSFTSWHKAGRAFDTRWDYRVNGQQILFISPEWRAGRLFWRLYLRAARQDGRMGEPLAAPVFDAHNRRLLPPPAGYFVDFTALAAAHGWNRIAAQERETFDWRTQPLALEYWHFERRDGLSWYQAMRLVHDDQTLERIFTRERVLAAGARPNFLPFLGLPWAQLPPPVAGPITLPPGYRQ
>NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase
MDPINQRIGDMLARIRATRPLIHHITNLVVMNDTANVTLHVGGLPVMAHDAEEVAEMVAHAGALVLNVGTLSPDWIESMLIAGRRANELQTPVVLDPVGAGATQLRTRTNLELLRSLRIAVVRGNGGEIGALSGEGGEVKGVESVSGPEDPLTAARRLAQTYHTVVALTGARDIITDGERVLTVNNGHIWLTTLTGTGCMATTMVAAFAAVERDYLLAAAGGLAMFGLAAELAAEKAHGPASFKVALFDQIYNLTPEQVANGARVVEGGS
>NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase
MVLSTLIEPLPSVQSDPIPFPSGGGIVYVITDRRAAGERALTDIVSAALRGGAHVIQLRDKDVPARDMVALGQALLPLTRDAGVPLIVNDRVDVALALDADGVHVGQDDIPAEMVRRIIGPERILGVSVATVEQAQRAMDAGATYVSVGDLFGTPSKPDAGPPIGLEPLAEIARTVNLPVLGIGGINLANAASVIRAGAVGVAVISAVIGAPDPEAATRALHAVIASALDERARAG
>NC_009523.1|WP_011956663.1|2392511_2393402_-|zinc-metalloprotease-HtpX
MTRLTNTLKTTALLATLTVLLVLAGQWFGGTQGMLIAFLIAVLMNGGAYWFSDKLALSMAGAREVDRYEAPRLYQMVAQLAQRANLPMPRVYLIDSAAPNAFATGRSPKHGAVAVTTGLLQLLNDNEVAAVIAHELGHIKNRDTLISTIAATFAGAVAILADMAQWALLLGGFGRHDDEGEDSGVAGVVGGLLLILVAPIAATLIQLAISRTREFEADAAGATISGEPLALASALRKIEAWKQQLPLATNPAMANLYIINPLDGGAIVRLFSTHPPTEERIARLEQMAFHRRALVW
>NC_009523.1|WP_011956664.1|2393562_2394012_-|Hsp20/alpha-crystallin-family-protein
MTTALTRFEPFAEALRLSDAVEQLLNESWVMPRSFFSGWAGTSRIPLDLYETDEAYVVTALMPGVPSDKIDIQLEQNTLTIRGEVHAEQPKDAHYLIQERASGKIERSVRLPATVDADKISASLNDGVLTIRLPKVEHARPHRITIQAA
>NC_009523.1|WP_011956665.1|2394104_2395484_-|HD-domain-containing-protein
MLQPSWYALLERLDPLFAAMMRVGGHPLLVGGAVRDLLLGLTPTDIDIEVYGVDGQTLAAALAPFGRVNVVGRSFGVLKMRLDEYEVDVALPSRRHPLPDEETGALPDYDPSLTPREALARRDFTINALALTPSGDLIDYFGGRADLEARVLRHTSEAFGDDPLRVLRAMQFAARFAMRLAPETAALCRTLLSQAAGLPPDRIWREWQKWALLGVFPSAGLRALDESGWLALYPELAALQGCPQHPRYHPEGDVWTHTLHVCDAAVRIADRDALDGHERLTLIVAALCHDLGKPPTTVIDDDGIPRSIGHSEAGVSLTQTFLVRIGAPHWIERRVTPLVREHLAHLNVQPTPRVVRRLAHRLAPATLQQWERLVEADASGRPPCPPDRPAAAFLAVAEAEGAAMSRPAPLVRGRDLIAAGVAPGPRLGALLRRAYEAQLDGVFSTAEEGVTWVLQTDEV
>NC_009523.1|WP_011956666.1|2395732_2397358_+|DUF3459-domain-containing-protein
MATQPAEYLWWQRGVIYQIYPRSFQDSNGDGVGDLRGIRSRLDYLVDLGVDAIWLSPIFPSPMADFGYDVSDYCDIHPLFGTLTDFDTLVADAHRRNLKVILDFVPNHTSDQHPWFIESRSSRSNPKRDWYIWRDPAPDGGPPNNWLSYFGGSAWEYDATTGQYYLHLFLKEQPDLNWRNPQVQAAMLDAMRFWLDRGVDGFRVDVMWLMIKDDQFRDNPPNPAWKPGMMPHMRLLETYSADQPDVHTIVAMMRRVLDSYDERMMVGEIYLPYDRLMRYYGTPEAPEAHLPFNFALVLLPWDAQTIAQTIALYEALLPPFAWPNWVLGNHDQPRIASRVGEAQARVAAMLLLTLRGTPTIYYGDEIGMHNVPIPPDRVQDPFEKNVPGEGHGRDPQRTPMQWDASEYAGFSKVQPWLPVADDYRQRNVATQRNVPHSMLSLYRRLLALRRSEPALSIGSYQAVTVEGDDAARQSVLAFIREADGCRFLIALNLASHPARMNLSAIGEGTIALSTHLDRGGITVRDSLELRADEGVVVALAS
>NC_009523.1|WP_011956667.1|2397568_2398957_+|NERD-domain-containing-protein
MAVQVWIGEKPEHANERRAIMALARGLDRLDGLYLILANFSVGGRNIDLVIIKQDGIFIIELKHCDGKVFGDVNGPWFVEGSNGERKRLNPGRKNPYNQVISYYYNLVNFLNDHRAELLSPQKAKTVDFRTCRRLVVIAPTLQEGSRVETDWKVDLKGLDELPAYLVTERSSEIDLTDEEMLRIPELLHLTRWAEINTLLKGVLPRLDEPTVVVERPASPEHPVIDVPPTEQARTLTADPEAQQVSTPAPPTSNRRLASLWQSWTGRVALASGLVILALIGILFSQGRSAPRPDQSAQSLVVSTSLPAGGADAGAISPVSTCVWSGFQPVGRRMINGVWENVGVGGNAPGLSPDVVVTLEEVEFCNGKMTLRWSLRNNLSDQSIVLPLTAENIEVRDSVGTRYLVADDLSQPRELRAPPGERVRGSAIIDRPVNLNASTLVVVLKKLPFGETTWLVPTPGTG
>NC_009523.1|WP_011956668.1|2399751_2401170_-|FAD-dependent-oxidoreductase
MASIQNSFTARALEGAAALASTAWPVMERLLPERLEFDDTQSIWHAGTSDYRPRPSLEGSITADLAIIGGGFTGVSTAYHIAQRFPQRRIVLLEATSLANGASGRNGGLALNWINGIDTSDPDLTRKVYGLTSAGLCAIRTLIERHRLPVDHRFDGTLTLHTSPERAEAAHAEGEYLRGLGIPVQFLYRNELAPQFNARGVYGATFEPDTGQINGAQFVRGLRPILEERGVAIYEQTPVLRLRVGREIHLTTPRGEVRSQAVVLATNGYTSKLGLFRDALFPLHSSVFATAPLTPAQREELGWRSFAGFADDRDRISYGSLTCTGHLVFGGGSNQAYAYLFNNRTRFPMQSGIARRAQEAIRQTLLEYFPAASALPIACRWSGVLGITLNRQPLWGRCGEYRNIYYALGYSGHGITLANLAGEFIADLYGGDDSRWRWLPFYERRYPPIPPEPFRWLGYQAFTRLTGRSPRV
>NC_009523.1|WP_157041282.1|2401676_2402660_+|HAMP-domain-containing-protein
MRTSEHISSLVLADIDQQHASIADEAEALLRAAQRLYNRLPSETDALTDTQREAFYAEIELVEEQREAFTDQANAHFAGMGDVARQYIANDVTLTFADVVLALMAMVALTAGALWLIERRIVRPLRSITNVASRLAEGRLDGELPVTSNDEIGMLQQTFNRMAATVQQQASDLELHYRQVTQARDALEIAHRQAVEQLTIIQQQQEAIRELSVPVLPVSHDTLVMPLVGALDSTRLLQVQEQALERIAATRARRLLLDITGVPVVDSHVAQGLIRVVQAARLLGSDVTLIGIRSEVAQSIVGLGISLSSIRTCSDLQSALAQKGGGS
>NC_009523.1|WP_011956670.1|2402656_2403601_+|STAS-domain-containing-protein
MIRLTQRQIHHGTFGLLNGLGLFTLTVALFPEPQWLTIIPIVAGLAFGGGLWFAYWRGWEPARPLLIVFLTLVVALGMNEQFLESRFNHVIYTIPALALVLTGPVWVASSALALLAAFAIRTGGGPYLNPFELVTFTLIIGGMIFSRLSIDNAQRLEAAKREAEEARARAEQRERDLAAQAEELAQRNAEQQRLLELVSVLETPTIALAEGVLLAPIVGALDTRRAQALTARLLNDASAQRAQRVILDISGVTAVDTQVAQALIQTARALSLLGCQVTLTGISATVAMTLTHLGVALESIHTVRSPQEALTQTQ

Crispr_ID: NC_009523_48

• CRISPR_ID: NC_009523_48
• CRISPR_location: 2403814-2403905
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_48

Consensus_repeat	Method
ATAGCCCGCGCAGGCGGGCTTTGC	CRISPRCasFinder

spacers of NC_009523_48

>48.1|2403838|44|NC_009523|CRISPRCasFinder
ATTCCATAGCCGAGGGCTTATGGTCTTTGAATAAATAATCCGGT

CRISPR arrays and Neighbor proteins around NC_009523_48

CRISPR arrays

The CRISPR arrays of NC_009523_48

>merge|NC_009523|48|2403814-2403905|CRISPRCasFinder
ATAGCCCGCGCAGGCGGGCTTTGCATTCCATAGCCGAGGGCTTATGGTCTTTGAATAAATAATCCGGTATAGCCCGCGCAGGCGGGCTTCGC

>NC_009523|48|45|2403814-2403905|CRISPRCasFinder
ATAGCCCGCGCAGGCGGGCTTTGC	ATTCCATAGCCGAGGGCTTATGGTCTTTGAATAAATAATCCGGT
ATAGCCCGCGCAGGCGGGCTTCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956676.1|2408082_2408970_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956679.1|2410123_2410342_+|DUF4926-domain-containing-protein	unknown	unknown	gnl|CDD|379816
NC_009523.1|WP_011956677.1|2408979_2409552_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333434.1|2404042_2404225_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956666.1|2395732_2397358_+|DUF3459-domain-containing-protein	unknown	unknown	gnl|CDD|200470
NC_009523.1|WP_049767500.1|2405091_2406501_-|MFS-transporter	unknown	unknown	gnl|CDD|129794
NC_009523.1|WP_011956675.1|2407362_2407620_+|hypothetical-protein	unknown	unknown	gnl|CDD|375906
NC_009523.1|WP_011956663.1|2392511_2393402_-|zinc-metalloprotease-HtpX	unknown	unknown	gnl|CDD|320695
NC_009523.1|WP_011956681.1|2411294_2412110_+|hypothetical-protein	unknown	unknown	gnl|CDD|290220
NC_009523.1|WP_011956674.1|2406585_2407182_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_009523.1|WP_011956667.1|2397568_2398957_+|NERD-domain-containing-protein	unknown	unknown	gnl|CDD|377990
NC_009523.1|WP_011956670.1|2402656_2403601_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011956668.1|2399751_2401170_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274522
NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|234590
NC_009523.1|WP_157041282.1|2401676_2402660_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011956665.1|2394104_2395484_-|HD-domain-containing-protein	unknown	unknown	gnl|CDD|182810
NC_009523.1|WP_011956664.1|2393562_2394012_-|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|107221
NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase	unknown	unknown	gnl|CDD|236477
NC_009523.1|WP_011956680.1|2410423_2411245_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	unknown	unknown	gnl|CDD|234899
NC_009523.1|WP_011956672.1|2404314_2404845_-|hypothetical-protein	unknown	unknown	gnl|CDD|378270

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956681.1|2411294_2412110_+|hypothetical-protein	gnl|CDD|290220	pfam13485, Peptidase_MA_2, Peptidase MA superfamily.	0.00404166
NC_009523.1|WP_011956679.1|2410123_2410342_+|DUF4926-domain-containing-protein	gnl|CDD|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	8.16735e-26
NC_009523.1|WP_011956666.1|2395732_2397358_+|DUF3459-domain-containing-protein	gnl|CDD|200470	cd11331, AmyAc_OligoGlu_like, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomalto-oligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NC_009523.1|WP_049767500.1|2405091_2406501_-|MFS-transporter	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.17052e-59
NC_009523.1|WP_011956675.1|2407362_2407620_+|hypothetical-protein	gnl|CDD|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	5.83227e-15
NC_009523.1|WP_011956663.1|2392511_2393402_-|zinc-metalloprotease-HtpX	gnl|CDD|320695	cd07336, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase. This HtpX family of peptidase M48 subfamily B includes uncharacterized HtpX homologs and consists of proteins smaller than Ste24p, with homology restricted to the C-terminal half of Ste24p. HtpX expression is controlled by the Cpx stress response system, which senses abnormal membrane proteins. HtpX participates in the proteolytic quality control of these misfolded proteins by undergoing self-degradation and collaborating with FtsH, a membrane-bound and ATP-dependent protease, to eliminate them. HtpX, a zinc metalloprotease with an active site motif HEXXH, has an FtsH-like topology, and is capable of introducing endoproteolytic cleavages into SecY (also an FtsH substrate). However, HtpX does not have an ATPase activity and will only act against cytoplasmic regions of a target membrane protein. Thus, HtpX and FtsH have overlapping and/or complementary functions, which are especially important at high temperature; in E. coli and Xylella fastidiosa, HtpX is heat-inducible, while in Streptococcus gordonii it is not.	3.66359e-155
NC_009523.1|WP_011956674.1|2406585_2407182_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	8.56311e-14
NC_009523.1|WP_011956667.1|2397568_2398957_+|NERD-domain-containing-protein	gnl|CDD|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	1.17457e-13
NC_009523.1|WP_011956670.1|2402656_2403601_+|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.121e-37
NC_009523.1|WP_011956668.1|2399751_2401170_-|FAD-dependent-oxidoreductase	gnl|CDD|274522	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.	1.02669e-55
NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase	gnl|CDD|234590	PRK00043, thiE, thiamine phosphate synthase.	1.38534e-83
NC_009523.1|WP_157041282.1|2401676_2402660_+|HAMP-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	2.36925e-40
NC_009523.1|WP_011956665.1|2394104_2395484_-|HD-domain-containing-protein	gnl|CDD|182810	PRK10885, cca, multifunctional CCA addition/repair protein.	9.60811e-65
NC_009523.1|WP_011956664.1|2393562_2394012_-|Hsp20/alpha-crystallin-family-protein	gnl|CDD|107221	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.	4.27019e-35
NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase	gnl|CDD|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	9.6592e-139
NC_009523.1|WP_011956680.1|2410423_2411245_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase	gnl|CDD|234899	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase.	4.45576e-139
NC_009523.1|WP_011956672.1|2404314_2404845_-|hypothetical-protein	gnl|CDD|378270	pfam09843, DUF2070, Predicted membrane protein (DUF2070). This is a family of Archaeal 7-TM proteins. There are 6 closely assembled TM-regions at the N-terminus followed by a long intracellular, from residues 220-590, highly conserved region, of unknown function, terminating with one more TM-region. The short 25 residue section between TMs 5 and 6 might lie on the outer surface of the membrane and be acting as a receptor (from TMHMM).	0.00173129

Protein sequences

>NC_009523.1|WP_011956670.1|2402656_2403601_+|STAS-domain-containing-protein
MIRLTQRQIHHGTFGLLNGLGLFTLTVALFPEPQWLTIIPIVAGLAFGGGLWFAYWRGWEPARPLLIVFLTLVVALGMNEQFLESRFNHVIYTIPALALVLTGPVWVASSALALLAAFAIRTGGGPYLNPFELVTFTLIIGGMIFSRLSIDNAQRLEAAKREAEEARARAEQRERDLAAQAEELAQRNAEQQRLLELVSVLETPTIALAEGVLLAPIVGALDTRRAQALTARLLNDASAQRAQRVILDISGVTAVDTQVAQALIQTARALSLLGCQVTLTGISATVAMTLTHLGVALESIHTVRSPQEALTQTQ
>NC_009523.1|WP_157041282.1|2401676_2402660_+|HAMP-domain-containing-protein
MRTSEHISSLVLADIDQQHASIADEAEALLRAAQRLYNRLPSETDALTDTQREAFYAEIELVEEQREAFTDQANAHFAGMGDVARQYIANDVTLTFADVVLALMAMVALTAGALWLIERRIVRPLRSITNVASRLAEGRLDGELPVTSNDEIGMLQQTFNRMAATVQQQASDLELHYRQVTQARDALEIAHRQAVEQLTIIQQQQEAIRELSVPVLPVSHDTLVMPLVGALDSTRLLQVQEQALERIAATRARRLLLDITGVPVVDSHVAQGLIRVVQAARLLGSDVTLIGIRSEVAQSIVGLGISLSSIRTCSDLQSALAQKGGGS
>NC_009523.1|WP_011956668.1|2399751_2401170_-|FAD-dependent-oxidoreductase
MASIQNSFTARALEGAAALASTAWPVMERLLPERLEFDDTQSIWHAGTSDYRPRPSLEGSITADLAIIGGGFTGVSTAYHIAQRFPQRRIVLLEATSLANGASGRNGGLALNWINGIDTSDPDLTRKVYGLTSAGLCAIRTLIERHRLPVDHRFDGTLTLHTSPERAEAAHAEGEYLRGLGIPVQFLYRNELAPQFNARGVYGATFEPDTGQINGAQFVRGLRPILEERGVAIYEQTPVLRLRVGREIHLTTPRGEVRSQAVVLATNGYTSKLGLFRDALFPLHSSVFATAPLTPAQREELGWRSFAGFADDRDRISYGSLTCTGHLVFGGGSNQAYAYLFNNRTRFPMQSGIARRAQEAIRQTLLEYFPAASALPIACRWSGVLGITLNRQPLWGRCGEYRNIYYALGYSGHGITLANLAGEFIADLYGGDDSRWRWLPFYERRYPPIPPEPFRWLGYQAFTRLTGRSPRV
>NC_009523.1|WP_011956667.1|2397568_2398957_+|NERD-domain-containing-protein
MAVQVWIGEKPEHANERRAIMALARGLDRLDGLYLILANFSVGGRNIDLVIIKQDGIFIIELKHCDGKVFGDVNGPWFVEGSNGERKRLNPGRKNPYNQVISYYYNLVNFLNDHRAELLSPQKAKTVDFRTCRRLVVIAPTLQEGSRVETDWKVDLKGLDELPAYLVTERSSEIDLTDEEMLRIPELLHLTRWAEINTLLKGVLPRLDEPTVVVERPASPEHPVIDVPPTEQARTLTADPEAQQVSTPAPPTSNRRLASLWQSWTGRVALASGLVILALIGILFSQGRSAPRPDQSAQSLVVSTSLPAGGADAGAISPVSTCVWSGFQPVGRRMINGVWENVGVGGNAPGLSPDVVVTLEEVEFCNGKMTLRWSLRNNLSDQSIVLPLTAENIEVRDSVGTRYLVADDLSQPRELRAPPGERVRGSAIIDRPVNLNASTLVVVLKKLPFGETTWLVPTPGTG
>NC_009523.1|WP_011956666.1|2395732_2397358_+|DUF3459-domain-containing-protein
MATQPAEYLWWQRGVIYQIYPRSFQDSNGDGVGDLRGIRSRLDYLVDLGVDAIWLSPIFPSPMADFGYDVSDYCDIHPLFGTLTDFDTLVADAHRRNLKVILDFVPNHTSDQHPWFIESRSSRSNPKRDWYIWRDPAPDGGPPNNWLSYFGGSAWEYDATTGQYYLHLFLKEQPDLNWRNPQVQAAMLDAMRFWLDRGVDGFRVDVMWLMIKDDQFRDNPPNPAWKPGMMPHMRLLETYSADQPDVHTIVAMMRRVLDSYDERMMVGEIYLPYDRLMRYYGTPEAPEAHLPFNFALVLLPWDAQTIAQTIALYEALLPPFAWPNWVLGNHDQPRIASRVGEAQARVAAMLLLTLRGTPTIYYGDEIGMHNVPIPPDRVQDPFEKNVPGEGHGRDPQRTPMQWDASEYAGFSKVQPWLPVADDYRQRNVATQRNVPHSMLSLYRRLLALRRSEPALSIGSYQAVTVEGDDAARQSVLAFIREADGCRFLIALNLASHPARMNLSAIGEGTIALSTHLDRGGITVRDSLELRADEGVVVALAS
>NC_009523.1|WP_011956665.1|2394104_2395484_-|HD-domain-containing-protein
MLQPSWYALLERLDPLFAAMMRVGGHPLLVGGAVRDLLLGLTPTDIDIEVYGVDGQTLAAALAPFGRVNVVGRSFGVLKMRLDEYEVDVALPSRRHPLPDEETGALPDYDPSLTPREALARRDFTINALALTPSGDLIDYFGGRADLEARVLRHTSEAFGDDPLRVLRAMQFAARFAMRLAPETAALCRTLLSQAAGLPPDRIWREWQKWALLGVFPSAGLRALDESGWLALYPELAALQGCPQHPRYHPEGDVWTHTLHVCDAAVRIADRDALDGHERLTLIVAALCHDLGKPPTTVIDDDGIPRSIGHSEAGVSLTQTFLVRIGAPHWIERRVTPLVREHLAHLNVQPTPRVVRRLAHRLAPATLQQWERLVEADASGRPPCPPDRPAAAFLAVAEAEGAAMSRPAPLVRGRDLIAAGVAPGPRLGALLRRAYEAQLDGVFSTAEEGVTWVLQTDEV
>NC_009523.1|WP_011956664.1|2393562_2394012_-|Hsp20/alpha-crystallin-family-protein
MTTALTRFEPFAEALRLSDAVEQLLNESWVMPRSFFSGWAGTSRIPLDLYETDEAYVVTALMPGVPSDKIDIQLEQNTLTIRGEVHAEQPKDAHYLIQERASGKIERSVRLPATVDADKISASLNDGVLTIRLPKVEHARPHRITIQAA
>NC_009523.1|WP_011956663.1|2392511_2393402_-|zinc-metalloprotease-HtpX
MTRLTNTLKTTALLATLTVLLVLAGQWFGGTQGMLIAFLIAVLMNGGAYWFSDKLALSMAGAREVDRYEAPRLYQMVAQLAQRANLPMPRVYLIDSAAPNAFATGRSPKHGAVAVTTGLLQLLNDNEVAAVIAHELGHIKNRDTLISTIAATFAGAVAILADMAQWALLLGGFGRHDDEGEDSGVAGVVGGLLLILVAPIAATLIQLAISRTREFEADAAGATISGEPLALASALRKIEAWKQQLPLATNPAMANLYIINPLDGGAIVRLFSTHPPTEERIARLEQMAFHRRALVW
>NC_009523.1|WP_011956662.1|2391397_2392108_-|thiamine-phosphate-synthase
MVLSTLIEPLPSVQSDPIPFPSGGGIVYVITDRRAAGERALTDIVSAALRGGAHVIQLRDKDVPARDMVALGQALLPLTRDAGVPLIVNDRVDVALALDADGVHVGQDDIPAEMVRRIIGPERILGVSVATVEQAQRAMDAGATYVSVGDLFGTPSKPDAGPPIGLEPLAEIARTVNLPVLGIGGINLANAASVIRAGAVGVAVISAVIGAPDPEAATRALHAVIASALDERARAG
>NC_009523.1|WP_011956661.1|2390542_2391355_-|hydroxyethylthiazole-kinase
MDPINQRIGDMLARIRATRPLIHHITNLVVMNDTANVTLHVGGLPVMAHDAEEVAEMVAHAGALVLNVGTLSPDWIESMLIAGRRANELQTPVVLDPVGAGATQLRTRTNLELLRSLRIAVVRGNGGEIGALSGEGGEVKGVESVSGPEDPLTAARRLAQTYHTVVALTGARDIITDGERVLTVNNGHIWLTTLTGTGCMATTMVAAFAAVERDYLLAAAGGLAMFGLAAELAAEKAHGPASFKVALFDQIYNLTPEQVANGARVVEGGS
>NC_009523.1|WP_041333434.1|2404042_2404225_+|hypothetical-protein
MLLRVVQVALVGAWIAWRQPWRATSPAQQRLGHLVMVMVAVLLFPAGATLFLQSNSTAFN
>NC_009523.1|WP_011956672.1|2404314_2404845_-|hypothetical-protein
MFATLIFGMQVVVNLLLYSLVARWHIQPRLKQLPLVAALTPLLLFQVLRTMGATFLLPGVVGTALPEGFAAPGAYGDLLAVTLALVSLFALRRGWRGALILVWLFSIIGLLDFLSAFTLGISFNIAANYALGPIWFIPTFAVPAFVVAQVLVIILLVTRGHEYTVARRQKPGVQPV
>NC_009523.1|WP_049767500.1|2405091_2406501_-|MFS-transporter
MATPLTARSPWHVLTVTSLAVFAVLLDSLVLVVAFPDIERSFPAVSATALSWVLNAYTIIYGALLVPAGRLADRIGRRRTFLLGVTLFTTASVLCGLALSPGWLVALRMAQAAGGALLSPAALALTLAAFPPERRTLAVALNGAVGALAVVAGPPLGALIVQTVGWSGIFFLNLPIGLLALVVGWRVLAEWREPTTAWPDGLGVTLLIVGVGLLTGGLVQSEAWGWSSPAVLAMLAVGATVLGGFLRRAQRVAVPVLDLALFASGPFRRANLANTLFGVAFTAMFFGSVFFLTRIWGFSLVQAGLAITPGPLMVVLGAPLAGRLASRWGHRRLLVVGGLLYAAGALVLLIGAGPTPQFLVRWLPAMVLTGLGVALIIPLLSGAAVQGLSLAQLATGSSVVQALRQFASVLGVALTVLLLGDGVLTAVSFAPIFGLMLAGGLVVSAISAGLPQVVVPARKEGASDYEPVV
>NC_009523.1|WP_011956674.1|2406585_2407182_-|TetR/AcrR-family-transcriptional-regulator
MGKGTETRERIIARAAEIFNVDGYAGTAISDIMRATGLEKGGIYRHFSGKDALALAAFDYAAGQVRQRIAASLAGSPTAVATLLGFVEVFRGYAHNPPVVGGCPILNTAIDSDDTNPALAQRAAAVIDEWRSLIRTTVAQGIARGEIRPEIDGDALALLMIATLEGAVMLARLLRDAAPLEQAANHLCSYIEQSVRAC
>NC_009523.1|WP_011956675.1|2407362_2407620_+|hypothetical-protein
MARLYANEHFPLPAVEEVRRSGHDVLTSYESGRAGQAVSDEDVLAFAGAEECIVITLNRKHKAMGCQARESSAAVSTAAAAAPGT
>NC_009523.1|WP_011956676.1|2408082_2408970_+|hypothetical-protein
MSHYLNMLRQQRRRSTGIEFTARTLLAILAFVAMGGSAVYWWGVQSQLTDNRIVAVAFTAILVLAPPSLVSFLIPWSPAGMLLQKVNARTWAFPVIIGCALYLLYYAFQLQWAWWAAQPVVAETNLVYQQVLIGMIGFIIIPALLWTPVSSDELVEQVRQAHLVKRYELQTQADIAILRATLLRAQEKALIGFANLTVQEREELAAVMQSLVSGIDRTLKEIGQTVKTVSGVALPFDSMLDDNEDIRDILDYIGDTLQTGVLEDTTQDHKEAQQRGSAHEREEALPRSVRERRQR
>NC_009523.1|WP_011956677.1|2408979_2409552_+|hypothetical-protein
MAVRSKSLGPTPQRSTRQRKPAVPPRRPFAPYPIVEPPARSGIGAPAGLMMILFGLPLWALGAKYTLDGVVIGINMLAAFLELPARVPAPTGWWNLLLIPIGLLFSYVESSVRLNLFGGPAQLLALLILLALTHGIDIYTTYLGISSLAAQSTGIGQVLNLFWWSPYVAAVVLTYLPELLIRGGWSLLTE
>NC_009523.1|WP_011956679.1|2410123_2410342_+|DUF4926-domain-containing-protein
MNDTPKLFDVVALLEDIPDYRLSRGQVGTIVEELAPHVFEVEFSDDNGRTYALLALRSDQFIVLHYEPKLAA
>NC_009523.1|WP_011956680.1|2410423_2411245_-|bifunctional-DNA-formamidopyrimidine-glycosylase/DNA-(apurinic-or-apyrimidinic-site)-lyase
MPELPEVQLAADSLGVQIVGARIVRVERLDWTRMVETPSPDEFITLLAGRQVHGWGRRAKWILLFLDGGWTLALHLRMSGSLTVQPADAPPDKHTHLVLRLDDGRQVFFRDPRKFGRARLLDADGRAALDAAHGDEPLSNAFTVERLAELLRGRKRAIKPLLLDQAVIAGIGNIYADEALWRARIHPLRPASDLSADEVAALHDGIRAALRQALTNGGSTLRDYRNSYGTRGTNQDHFNAYDREGQPCPRCGATIIKTVVAQRGTHYCPECQR
>NC_009523.1|WP_011956681.1|2411294_2412110_+|hypothetical-protein
MNHLISLNRIAILALVACVALFLFAQPQPLVLSRWSPVSPSVPTIGAVAVPVADVSPLNIVVNDGLYIDERDRLDQDARRAYAYVAARFGSELMSPLTVAFIQDAGCALSGIAYTDIRRVQVFTCNAIGRERAIAILAHEYVHQLQQDRYGSRHLSADLILSEGMATWGAGVYWLGEYPDFCRYVRAQRTNGISHPLATHYAGRGVALMNALYYQWASFVEFLIDRYGRERLDAVYVTGAGTPGSADYRAVYGKDLATLEQEWIAWLEAAP

Crispr_ID: NC_009523_49

• CRISPR_ID: NC_009523_49
• CRISPR_location: 2427392-2436730
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 126 spacers

Consensus repeat of NC_009523_49

Consensus_repeat	Method
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CRT
ATTGAGGAATTTTCGGCTCGCTGAAGAGCACTGAAAC	PILER-CR
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CRISPRCasFinder

spacers of NC_009523_49

>49.1|2427429|37|NC_009523|CRT
TTTGCCTGTCGGCGAGCGGAAACCAATACGGTGACAA
>49.2|2427503|44|NC_009523|CRT
TCCCTGAAATATCGTCTATTGTCTATCAATTAGGCTATTCAGGC
>49.3|2427584|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTCGCCCGCTGGAGCATCGAGGTTGATGCGCGGAACAT
>49.4|2427659|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AGCGGGATCGGCGTGCTCATCAATCTCGCCCGCGAGCG
>49.5|2427734|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AAGTATAGTACTGGCGGTTGGTTGGTGAAAGACGGA
>49.6|2427807|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CCAGACGTAATCGAGCGCGCTTAGTCCGGCGTGAC
>49.7|2427879|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCGTCGGTAACGGCGACTGGATCGCCAGCGCGTCGG
>49.8|2427952|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CTACGGCGCGCCAGGATGTATCACAAGTCGATACATCG
>49.9|2428027|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AAATACGAGAAGTTCGCGGGTCGAGACCGGGGCGCACC
>49.10|2428102|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AGGAACACATCTTCCGGAGCAGTATCAACACCAGTT
>49.11|2428175|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGACACGCGGAACGAACCGCGCCGGTGTACGAGTTTCT
>49.12|2428250|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CTCTTTCGGAGACCGGCGGCGATTGCGAAAGGGCGA
>49.13|2428323|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GGGTCACCTCACGCGCTTCGGTGTGGATGGGTTTGT
>49.14|2428396|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGTGTTGTGACAGCCCGCGCCCATCGCCTCGCCCGAA
>49.15|2428470|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GGGGCGCTCTCCGCCCCCTCCATTCTTATTATACCA
>49.16|2428543|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCAAGTTCGGCGCGACCGGACGATCCCGCATCTGG
>49.17|2428615|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCGCGCGAAGGGCTTTCATACTTGGGTTCTCGGCGAG
>49.18|2428689|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GACGTTTTCGATACGCTTGACGCCGGAATCGCGCATC
>49.19|2428763|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTGATGCGTTACTTCAGACGATAGACCGCGCGGCG
>49.20|2428835|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGCGTCGCGCGAACAACACCGAAATCCGGTTAGAA
>49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AACAACCCGCCGCGCTGCCAGACTTCCACCAGCGCGA
>49.22|2428981|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCGGACGGGTGCGATGTGGACGATCTCAATCCAACCGTT
>49.23|2429057|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
ATTACACAGAAGCCGTCGCACTCGTCGAAGTCTGG
>49.24|2429129|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
ACGCACCATCAGCGCCACCCGCCGCTCGTCCATCCC
>49.25|2429202|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GGTTCCGTCGGCGCGCGTGTTGCGTCAGTTGTGCAA
>49.26|2429275|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCCGCGCGGTCGATCCGCGTCGTCGGAAGTTACAAC
>49.27|2429348|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AAGATGCTGTGTTGTGACACTGCTGAAAGACAACGA
>49.28|2429421|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTGAGTCCTCGTTGTACAGCACTGTCAATGTGATCTCA
>49.29|2429496|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CATCAACGCGGCGGTGACGCTGTGGTTGTCGCCCC
>49.30|2429568|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CCGATCTCGACTTCCGCAGCGCCTTCGTTGCGCCGGA
>49.31|2429642|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
ACTCCCGTCTGAGCGTGAGGCGAAGCAAAGACGGC
>49.32|2429714|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AACTCTTGCACCTCTGGGAACCGTCGGTGAGGAGCG
>49.33|2429787|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCGACCGACCGACGCCGAACGCTCGCGGTTTGAACAG
>49.34|2429861|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCGGCGTAACGGTCAACGTCGACGCGCTGCTGGCGGATT
>49.35|2429937|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGTGAATACGAGGGCGAGTTGATAGGCGTCTGGAAAC
>49.36|2430011|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTTCCAAGACCCGAAAATCATTGATATCGAGGTCTGG
>49.37|2430085|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CATTCCGGAACACCGCCCCGCCGTCGTCGAGAAACT
>49.38|2430158|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGCCCAGCGCGCCGCGCGCTGCCAGACATCCGCGTCGT
>49.39|2430233|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TGTCAAGCCCCAATTTTGCGGAAAATCCGGCGATTTT
>49.40|2430307|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TAACCCGGAGCGGCGGATCGTCGTTATACGCCCTAT
>49.41|2430380|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTCGCCACTGAAGATTAGGCATATCAAAGTCCCGTGTT
>49.42|2430455|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCAGTCGAGCGCTGTAATGCGCGTTCGATCCGATCC
>49.43|2430528|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGTGAGTACGCAAGATTCAGGTTTACCGTTGTTGAA
>49.44|2430601|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CAGGAGAGCGCATTTAGGATCGTAGCCAGCAATTGC
>49.45|2430674|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TGACGCGCATATGATCCTCTCCTGTTGACGTGATAAA
>49.46|2430748|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCCCTTGCCATTTGCGCGCCTAGCGGCTACCTGACG
>49.47|2430821|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CTAATATCCGCACAATCCTAAACGCAATTATTCAGG
>49.48|2430894|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCGCGCGGGTTTATACAAGCCCGCTTGGATAGGGAA
>49.49|2430967|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTATCGCGCGCGTACACGCATTGCCTGACACACAATGTC
>49.50|2431043|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CTGCGACAGCACAGGTATGAAGCAATGGTACAGGC
>49.51|2431115|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CTAATATTTTCAGTTTATCCATAATCAACCTCAATCA
>49.52|2431189|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCT
>49.53|2431261|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAG
>49.54|2431335|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
ACCCGTACTGTCTCTGCCTTGCCCTTGCGGTTCATCT
>49.55|2431409|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAG
>49.56|2431483|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCAAGATAAGCCTTATACGCCGTATCAGCAAGTGTA
>49.57|2431556|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTAGGCTATCGGCATTATGATGATAGGGTTTTGGTACAG
>49.58|2431632|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTTCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCT
>49.59|2431706|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGGGTTCAAAGGGCTAAGCAAAGACGGTGTTTTTGT
>49.60|2431779|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AGAGAGGTGATACGTTATATGTGGGAAGTCCAAAA
>49.61|2431851|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GAAACACCGTGAAACTCCGTAAAACATCATATCACGAAT
>49.62|2431927|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGAATCTATGTCTTGTTGTGCGCAAAAATGTTACATAC
>49.63|2432002|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
ATTGTGACCGTTGTAGGCTACGCTCGGACGGTGAGAG
>49.64|2432076|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTGGCATATCGGGGCTACTGGTGTACCGAAAGCAGAC
>49.65|2432150|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTTACCACGCGCTTGCGCTAGCCGTATGCGCGCCTAG
>49.66|2432224|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCAACCCGGTACGAATCGAAATTGACGCGCATAGA
>49.67|2432296|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GGAACCCCGCCGACGCCGGCGGGGTTTCCGGTCGT
>49.68|2432368|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CACCGACAACGCTGACGTTCCAGAACCAACCGGTTGAG
>49.69|2432443|40|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGGAAGGGATGTCTCAAAGTGGGGATGGATCGAGTTCGAC
>49.70|2432520|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGTCTTCAGTTTCGCCGCGAACTCAACGGAGATTTC
>49.71|2432593|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTTGCCGATATCCGCGAATTACTGAAGAATATGGTGAA
>49.72|2432668|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCCGTCTGGTTCGACGCGGCGCGCTGGGCTGTCGAGTG
>49.73|2432743|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCGATAGTGGTCATAAACCGCTCTCAGGAACGTATCA
>49.74|2432817|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
AGCGTCTACCAGACGCTGGACGATGCGCGGAAGGAC
>49.75|2432890|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTGGCAGAAGGGGGGTGATCATATGGCGCTTGTCGC
>49.76|2432963|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTTTCCGAACATCAGCGCAATTATACGAATTGTGAG
>49.77|2433036|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TGTGTGACCGAGTGCGGCTACACGACGTTGCTTGAC
>49.78|2433109|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GGAGCGCGTGGCGGGTGTTTAGGTCGCTGAGTTAGCG
>49.79|2433183|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CATCATCGACATCCACCCAGCGCGTGCAATCGACCGC
>49.80|2433257|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTAAGCGAGCGGCGGCGCGGTTGGTGGCGCGCCGGA
>49.81|2433330|41|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTGATTGCGGCCAAAAGCCAAACGTCGAATCAAGTTCTTGA
>49.82|2433408|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
ACGACCCGACAAAATGACCGCATTTTACGAAGCAGA
>49.83|2433481|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GAGGAATTGCGCTTCGAGATCGACCGCGCCCGCGCCG
>49.84|2433555|40|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCTCGATGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTC
>49.85|2433632|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TGGCAGACAAACGCCGGATTTTGGTTCGCCGACGCGC
>49.86|2433706|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCGCCTGCAGCGTCTCCTTGCCGACGCCCCGCGCGGC
>49.87|2433780|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTCTCGGCGTCGTTGAGGTAGCGCGCGCAGACGACT
>49.88|2433853|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCGTGAGGAGCGGTCGCCGGGCAAACGCGGCGAAAA
>49.89|2433926|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCTGACCGGGCGGGTGCATCCACACTTGAAGATCGC
>49.90|2433999|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CCATCCGTTGTCGGACGGGGCTTGTCGGATTCGGT
>49.91|2434071|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGCCTTCGGGTCGCGCACCCCCAGCGCCGGCGCGTCC
>49.92|2434145|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCAGTCGCAGCGCCTTATAGAGCAGCGCCTCGGCGC
>49.93|2434218|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCATAATGCGGTGGGGTTGGAGGTGCGTCCGATTGA
>49.94|2434291|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGTCGCCGGTTCCGGCGCGCCGTTCGCGCGCGAAACG
>49.95|2434365|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCGACGAAGCGGCGCAATTCTTCCGAGAATTCAGTG
>49.96|2434438|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CAAAGCGCGTTTGATTATTCTCGCCGACGCCGACGT
>49.97|2434511|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGACCGCTTTCGTCCAGTCCTCAAGTTCTTGATGC
>49.98|2434583|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CCGGTCGTTAGCCTAGCACACAAGTTCCCGTCTGTCAA
>49.99|2434658|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GGTCGTAGTATCGGTCGCTGTTGCGAAGGACAACGAC
>49.100|2434732|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTTGGTCTCAACGTACACGTTGATCTCGCGCTCAAG
>49.101|2434805|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTTCGATAGTAGCGTTCGCTTCCCAGCGACCGTCAAT
>49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCTGCGCCCCAGTCGTCGAGCGCCGCAAGCAGCGCGT
>49.103|2434953|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTTGGTGGCGCTGCTGCTCCGCGACCCAGCCGTTC
>49.104|2435025|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
ATCGCCCGTCACACCTTCCCCCGCCGCCGGGCGAACGC
>49.105|2435100|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GCGAGACCGCGCCCGCCAGCGACCGGTTCTTCTTC
>49.106|2435172|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCAGCGATTGAACCACATCAAGCGCTTCGTCGCGG
>49.107|2435244|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCAAAAAGAGCGCGAATCAGTTCTTCCGCCTCCGCG
>49.108|2435317|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CTAACATTCCCACTATTCGCGCCCCGGTACACCGCC
>49.109|2435390|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
ACAACTACCCGAATATCGTTGTCATCCGGTCGGCAAA
>49.110|2435464|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TGTTCATTTATTCGCCGTCGGTCGGGACGGGCGTCTCAA
>49.111|2435540|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGCGAACTGGAGAACGACTTCCGCGTTTCGCGCGCGAA
>49.112|2435615|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TATATTGATTCGGTGTGCGAAGCCGCGCCCGCAACGAAC
>49.113|2435691|40|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGATGTGTTGTGACACTGGTACTGCTGATGGAACAACAGC
>49.114|2435768|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CCAGAACAGAAAACGGCGCGCGCGTTGACCGCGAGT
>49.115|2435841|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TACTATAGGCTAGCCCTAGCCGTTTGCGCGCCTAG
>49.116|2435913|41|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTCTGACGTTGCTGCCGACGCTGATCGAGTTGGCGACGGTC
>49.117|2435991|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CAGGTTTTTGGTTTGCCGACGTTTTCGTTGAGCGCGA
>49.118|2436065|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TTCAGTCCGTCCCAAGGCTTGCCGATGCGCCGGGACG
>49.119|2436139|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCGACCGCGCGCTGGTTGCGGACGCGGCGCGGGGTGTTG
>49.120|2436215|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GTGTTCGTCATATCGCACAGCCCGACCAGCCCATTGA
>49.121|2436289|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TGATCATCCACACCGGCAACGGTCTGATGCCGATGT
>49.122|2436362|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGAGGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTC
>49.123|2436436|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CGGCGAGCCGAACCTGCTGAACATCCCGCGCGGCGA
>49.124|2436509|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder
TCGGAGGCGGCGAAATGCTACCCGCGCGTGCTGTCGGT
>49.125|2436584|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder
GGGCGCGTGGGACACCTCACGCGCTTCGGCGTTGAC
>49.126|2436657|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder
CCAGACGCGGTACAACTCGAAAAAGCGGCGCTTCTCC

CRISPR arrays and Neighbor proteins around NC_009523_49

CRISPR arrays

The CRISPR arrays of NC_009523_49

>merge|NC_009523|49|2427392-2436730|CRT,PILER-CR,CRISPRCasFinder
GTTTCAATGCTCTTCAACAGCCAAAAATGAGCCGAAATTTGCCTGTCGGCGAGCGGAAACCAATACGGTGACAAGTTTCAATGCTCTTCAACAGCCAAAAATGAGCCGAAATCCCTGAAATATCGTCTATTGTCTATCAATTAGGCTATTCAGGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTCGCCCGCTGGAGCATCGAGGTTGATGCGCGGAACATGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAGCGGGATCGGCGTGCTCATCAATCTCGCCCGCGAGCGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAAGTATAGTACTGGCGGTTGGTTGGTGAAAGACGGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCCAGACGTAATCGAGCGCGCTTAGTCCGGCGTGACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCGTCGGTAACGGCGACTGGATCGCCAGCGCGTCGGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCTACGGCGCGCCAGGATGTATCACAAGTCGATACATCGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAAATACGAGAAGTTCGCGGGTCGAGACCGGGGCGCACCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAGGAACACATCTTCCGGAGCAGTATCAACACCAGTTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGACACGCGGAACGAACCGCGCCGGTGTACGAGTTTCTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCTCTTTCGGAGACCGGCGGCGATTGCGAAAGGGCGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGGGTCACCTCACGCGCTTCGGTGTGGATGGGTTTGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGTGTTGTGACAGCCCGCGCCCATCGCCTCGCCCGAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGGGGCGCTCTCCGCCCCCTCCATTCTTATTATACCAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCAAGTTCGGCGCGACCGGACGATCCCGCATCTGGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCGCGCGAAGGGCTTTCATACTTGGGTTCTCGGCGAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGACGTTTTCGATACGCTTGACGCCGGAATCGCGCATCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTGATGCGTTACTTCAGACGATAGACCGCGCGGCGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGCGTCGCGCGAACAACACCGAAATCCGGTTAGAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAACAACCCGCCGCGCTGCCAGACTTCCACCAGCGCGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCGGACGGGTGCGATGTGGACGATCTCAATCCAACCGTTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATATTACACAGAAGCCGTCGCACTCGTCGAAGTCTGGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATACGCACCATCAGCGCCACCCGCCGCTCGTCCATCCCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGGTTCCGTCGGCGCGCGTGTTGCGTCAGTTGTGCAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCCGCGCGGTCGATCCGCGTCGTCGGAAGTTACAACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAAGATGCTGTGTTGTGACACTGCTGAAAGACAACGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTGAGTCCTCGTTGTACAGCACTGTCAATGTGATCTCAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCATCAACGCGGCGGTGACGCTGTGGTTGTCGCCCCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCCGATCTCGACTTCCGCAGCGCCTTCGTTGCGCCGGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATACTCCCGTCTGAGCGTGAGGCGAAGCAAAGACGGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAACTCTTGCACCTCTGGGAACCGTCGGTGAGGAGCGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCGACCGACCGACGCCGAACGCTCGCGGTTTGAACAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCGGCGTAACGGTCAACGTCGACGCGCTGCTGGCGGATTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGTGAATACGAGGGCGAGTTGATAGGCGTCTGGAAACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTTCCAAGACCCGAAAATCATTGATATCGAGGTCTGGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCATTCCGGAACACCGCCCCGCCGTCGTCGAGAAACTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGCCCAGCGCGCCGCGCGCTGCCAGACATCCGCGTCGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTGTCAAGCCCCAATTTTGCGGAAAATCCGGCGATTTTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTAACCCGGAGCGGCGGATCGTCGTTATACGCCCTATGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTCGCCACTGAAGATTAGGCATATCAAAGTCCCGTGTTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCAGTCGAGCGCTGTAATGCGCGTTCGATCCGATCCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGTGAGTACGCAAGATTCAGGTTTACCGTTGTTGAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCAGGAGAGCGCATTTAGGATCGTAGCCAGCAATTGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTGACGCGCATATGATCCTCTCCTGTTGACGTGATAAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCCCTTGCCATTTGCGCGCCTAGCGGCTACCTGACGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCTAATATCCGCACAATCCTAAACGCAATTATTCAGGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCGCGCGGGTTTATACAAGCCCGCTTGGATAGGGAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTATCGCGCGCGTACACGCATTGCCTGACACACAATGTCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCTGCGACAGCACAGGTATGAAGCAATGGTACAGGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCTAATATTTTCAGTTTATCCATAATCAACCTCAATCAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATACCCGTACTGTCTCTGCCTTGCCCTTGCGGTTCATCTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCAAGATAAGCCTTATACGCCGTATCAGCAAGTGTAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTAGGCTATCGGCATTATGATGATAGGGTTTTGGTACAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTTCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGGGTTCAAAGGGCTAAGCAAAGACGGTGTTTTTGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAGAGAGGTGATACGTTATATGTGGGAAGTCCAAAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGAAACACCGTGAAACTCCGTAAAACATCATATCACGAATGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGAATCTATGTCTTGTTGTGCGCAAAAATGTTACATACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATATTGTGACCGTTGTAGGCTACGCTCGGACGGTGAGAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTGGCATATCGGGGCTACTGGTGTACCGAAAGCAGACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTTACCACGCGCTTGCGCTAGCCGTATGCGCGCCTAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCAACCCGGTACGAATCGAAATTGACGCGCATAGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGGAACCCCGCCGACGCCGGCGGGGTTTCCGGTCGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCACCGACAACGCTGACGTTCCAGAACCAACCGGTTGAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGGAAGGGATGTCTCAAAGTGGGGATGGATCGAGTTCGACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGTCTTCAGTTTCGCCGCGAACTCAACGGAGATTTCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTTGCCGATATCCGCGAATTACTGAAGAATATGGTGAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCCGTCTGGTTCGACGCGGCGCGCTGGGCTGTCGAGTGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCGATAGTGGTCATAAACCGCTCTCAGGAACGTATCAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATAGCGTCTACCAGACGCTGGACGATGCGCGGAAGGACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTGGCAGAAGGGGGGTGATCATATGGCGCTTGTCGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTTTCCGAACATCAGCGCAATTATACGAATTGTGAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTGTGTGACCGAGTGCGGCTACACGACGTTGCTTGACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGGAGCGCGTGGCGGGTGTTTAGGTCGCTGAGTTAGCGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCATCATCGACATCCACCCAGCGCGTGCAATCGACCGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTAAGCGAGCGGCGGCGCGGTTGGTGGCGCGCCGGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTGATTGCGGCCAAAAGCCAAACGTCGAATCAAGTTCTTGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATACGACCCGACAAAATGACCGCATTTTACGAAGCAGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGAGGAATTGCGCTTCGAGATCGACCGCGCCCGCGCCGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCTCGATGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTGGCAGACAAACGCCGGATTTTGGTTCGCCGACGCGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCGCCTGCAGCGTCTCCTTGCCGACGCCCCGCGCGGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTCTCGGCGTCGTTGAGGTAGCGCGCGCAGACGACTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCGTGAGGAGCGGTCGCCGGGCAAACGCGGCGAAAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCTGACCGGGCGGGTGCATCCACACTTGAAGATCGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCCATCCGTTGTCGGACGGGGCTTGTCGGATTCGGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGCCTTCGGGTCGCGCACCCCCAGCGCCGGCGCGTCCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCAGTCGCAGCGCCTTATAGAGCAGCGCCTCGGCGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCATAATGCGGTGGGGTTGGAGGTGCGTCCGATTGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGTCGCCGGTTCCGGCGCGCCGTTCGCGCGCGAAACGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCGACGAAGCGGCGCAATTCTTCCGAGAATTCAGTGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCAAAGCGCGTTTGATTATTCTCGCCGACGCCGACGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGACCGCTTTCGTCCAGTCCTCAAGTTCTTGATGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCCGGTCGTTAGCCTAGCACACAAGTTCCCGTCTGTCAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGGTCGTAGTATCGGTCGCTGTTGCGAAGGACAACGACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTTGGTCTCAACGTACACGTTGATCTCGCGCTCAAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTTCGATAGTAGCGTTCGCTTCCCAGCGACCGTCAATGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCTGCGCCCCAGTCGTCGAGCGCCGCAAGCAGCGCGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTTGGTGGCGCTGCTGCTCCGCGACCCAGCCGTTCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATATCGCCCGTCACACCTTCCCCCGCCGCCGGGCGAACGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGCGAGACCGCGCCCGCCAGCGACCGGTTCTTCTTCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCAGCGATTGAACCACATCAAGCGCTTCGTCGCGGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCAAAAAGAGCGCGAATCAGTTCTTCCGCCTCCGCGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCTAACATTCCCACTATTCGCGCCCCGGTACACCGCCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATACAACTACCCGAATATCGTTGTCATCCGGTCGGCAAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTGTTCATTTATTCGCCGTCGGTCGGGACGGGCGTCTCAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGCGAACTGGAGAACGACTTCCGCGTTTCGCGCGCGAAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTATATTGATTCGGTGTGCGAAGCCGCGCCCGCAACGAACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGATGTGTTGTGACACTGGTACTGCTGATGGAACAACAGCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCCAGAACAGAAAACGGCGCGCGCGTTGACCGCGAGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTACTATAGGCTAGCCCTAGCCGTTTGCGCGCCTAGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTCTGACGTTGCTGCCGACGCTGATCGAGTTGGCGACGGTCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCAGGTTTTTGGTTTGCCGACGTTTTCGTTGAGCGCGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTTCAGTCCGTCCCAAGGCTTGCCGATGCGCCGGGACGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCGACCGCGCGCTGGTTGCGGACGCGGCGCGGGGTGTTGGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGTGTTCGTCATATCGCACAGCCCGACCAGCCCATTGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTGATCATCCACACCGGCAACGGTCTGATGCCGATGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGAGGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCGGCGAGCCGAACCTGCTGAACATCCCGCGCGGCGAGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATTCGGAGGCGGCGAAATGCTACCCGCGCGTGCTGTCGGTGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATGGGCGCGTGGGACACCTCACGCGCTTCGGCGTTGACGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAATCCAGACGCGGTACAACTCGAAAAAGCGGCGCTTCTCCGTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT

>NC_009523|49|6|2427392-2436730|CRT
GTTTCAATGCTCTTCAACAGCCAAAAATGAGCCGAAA	TTTGCCTGTCGGCGAGCGGAAACCAATACGGTGACAA
GTTTCAATGCTCTTCAACAGCCAAAAATGAGCCGAAA	TCCCTGAAATATCGTCTATTGTCTATCAATTAGGCTATTCAGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTCGCCCGCTGGAGCATCGAGGTTGATGCGCGGAACAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGCGGGATCGGCGTGCTCATCAATCTCGCCCGCGAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAGTATAGTACTGGCGGTTGGTTGGTGAAAGACGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGACGTAATCGAGCGCGCTTAGTCCGGCGTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGTCGGTAACGGCGACTGGATCGCCAGCGCGTCGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTACGGCGCGCCAGGATGTATCACAAGTCGATACATCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAATACGAGAAGTTCGCGGGTCGAGACCGGGGCGCACC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGGAACACATCTTCCGGAGCAGTATCAACACCAGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGACACGCGGAACGAACCGCGCCGGTGTACGAGTTTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTCTTTCGGAGACCGGCGGCGATTGCGAAAGGGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGTCACCTCACGCGCTTCGGTGTGGATGGGTTTGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGTTGTGACAGCCCGCGCCCATCGCCTCGCCCGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGGCGCTCTCCGCCCCCTCCATTCTTATTATACCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAAGTTCGGCGCGACCGGACGATCCCGCATCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCGCGAAGGGCTTTCATACTTGGGTTCTCGGCGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GACGTTTTCGATACGCTTGACGCCGGAATCGCGCATC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGATGCGTTACTTCAGACGATAGACCGCGCGGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCGTCGCGCGAACAACACCGAAATCCGGTTAGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AACAACCCGCCGCGCTGCCAGACTTCCACCAGCGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGGACGGGTGCGATGTGGACGATCTCAATCCAACCGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATTACACAGAAGCCGTCGCACTCGTCGAAGTCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACGCACCATCAGCGCCACCCGCCGCTCGTCCATCCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGTTCCGTCGGCGCGCGTGTTGCGTCAGTTGTGCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCCGCGCGGTCGATCCGCGTCGTCGGAAGTTACAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAGATGCTGTGTTGTGACACTGCTGAAAGACAACGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGAGTCCTCGTTGTACAGCACTGTCAATGTGATCTCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATCAACGCGGCGGTGACGCTGTGGTTGTCGCCCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCGATCTCGACTTCCGCAGCGCCTTCGTTGCGCCGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACTCCCGTCTGAGCGTGAGGCGAAGCAAAGACGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AACTCTTGCACCTCTGGGAACCGTCGGTGAGGAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACCGACCGACGCCGAACGCTCGCGGTTTGAACAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGGCGTAACGGTCAACGTCGACGCGCTGCTGGCGGATT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGAATACGAGGGCGAGTTGATAGGCGTCTGGAAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTCCAAGACCCGAAAATCATTGATATCGAGGTCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATTCCGGAACACCGCCCCGCCGTCGTCGAGAAACT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCCCAGCGCGCCGCGCGCTGCCAGACATCCGCGTCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTCAAGCCCCAATTTTGCGGAAAATCCGGCGATTTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TAACCCGGAGCGGCGGATCGTCGTTATACGCCCTAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTCGCCACTGAAGATTAGGCATATCAAAGTCCCGTGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAGTCGAGCGCTGTAATGCGCGTTCGATCCGATCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGAGTACGCAAGATTCAGGTTTACCGTTGTTGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAGGAGAGCGCATTTAGGATCGTAGCCAGCAATTGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGACGCGCATATGATCCTCTCCTGTTGACGTGATAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCCCTTGCCATTTGCGCGCCTAGCGGCTACCTGACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAATATCCGCACAATCCTAAACGCAATTATTCAGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCGCGGGTTTATACAAGCCCGCTTGGATAGGGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTATCGCGCGCGTACACGCATTGCCTGACACACAATGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTGCGACAGCACAGGTATGAAGCAATGGTACAGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAATATTTTCAGTTTATCCATAATCAACCTCAATCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACCCGTACTGTCTCTGCCTTGCCCTTGCGGTTCATCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAAGATAAGCCTTATACGCCGTATCAGCAAGTGTA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTAGGCTATCGGCATTATGATGATAGGGTTTTGGTACAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGGTTCAAAGGGCTAAGCAAAGACGGTGTTTTTGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGAGAGGTGATACGTTATATGTGGGAAGTCCAAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GAAACACCGTGAAACTCCGTAAAACATCATATCACGAAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGAATCTATGTCTTGTTGTGCGCAAAAATGTTACATAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATTGTGACCGTTGTAGGCTACGCTCGGACGGTGAGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGGCATATCGGGGCTACTGGTGTACCGAAAGCAGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTACCACGCGCTTGCGCTAGCCGTATGCGCGCCTAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAACCCGGTACGAATCGAAATTGACGCGCATAGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGAACCCCGCCGACGCCGGCGGGGTTTCCGGTCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CACCGACAACGCTGACGTTCCAGAACCAACCGGTTGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGAAGGGATGTCTCAAAGTGGGGATGGATCGAGTTCGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTCTTCAGTTTCGCCGCGAACTCAACGGAGATTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTGCCGATATCCGCGAATTACTGAAGAATATGGTGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCCGTCTGGTTCGACGCGGCGCGCTGGGCTGTCGAGTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGATAGTGGTCATAAACCGCTCTCAGGAACGTATCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGCGTCTACCAGACGCTGGACGATGCGCGGAAGGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGGCAGAAGGGGGGTGATCATATGGCGCTTGTCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTTCCGAACATCAGCGCAATTATACGAATTGTGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTGTGACCGAGTGCGGCTACACGACGTTGCTTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGAGCGCGTGGCGGGTGTTTAGGTCGCTGAGTTAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATCATCGACATCCACCCAGCGCGTGCAATCGACCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTAAGCGAGCGGCGGCGCGGTTGGTGGCGCGCCGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGATTGCGGCCAAAAGCCAAACGTCGAATCAAGTTCTTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACGACCCGACAAAATGACCGCATTTTACGAAGCAGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GAGGAATTGCGCTTCGAGATCGACCGCGCCCGCGCCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTCGATGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGGCAGACAAACGCCGGATTTTGGTTCGCCGACGCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCCTGCAGCGTCTCCTTGCCGACGCCCCGCGCGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCTCGGCGTCGTTGAGGTAGCGCGCGCAGACGACT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGTGAGGAGCGGTCGCCGGGCAAACGCGGCGAAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCTGACCGGGCGGGTGCATCCACACTTGAAGATCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCATCCGTTGTCGGACGGGGCTTGTCGGATTCGGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCCTTCGGGTCGCGCACCCCCAGCGCCGGCGCGTCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAGTCGCAGCGCCTTATAGAGCAGCGCCTCGGCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCATAATGCGGTGGGGTTGGAGGTGCGTCCGATTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTCGCCGGTTCCGGCGCGCCGTTCGCGCGCGAAACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACGAAGCGGCGCAATTCTTCCGAGAATTCAGTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAAAGCGCGTTTGATTATTCTCGCCGACGCCGACGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGACCGCTTTCGTCCAGTCCTCAAGTTCTTGATGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCGGTCGTTAGCCTAGCACACAAGTTCCCGTCTGTCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGTCGTAGTATCGGTCGCTGTTGCGAAGGACAACGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTGGTCTCAACGTACACGTTGATCTCGCGCTCAAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTCGATAGTAGCGTTCGCTTCCCAGCGACCGTCAAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTGCGCCCCAGTCGTCGAGCGCCGCAAGCAGCGCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTGGTGGCGCTGCTGCTCCGCGACCCAGCCGTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATCGCCCGTCACACCTTCCCCCGCCGCCGGGCGAACGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGAGACCGCGCCCGCCAGCGACCGGTTCTTCTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAGCGATTGAACCACATCAAGCGCTTCGTCGCGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAAAAAGAGCGCGAATCAGTTCTTCCGCCTCCGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAACATTCCCACTATTCGCGCCCCGGTACACCGCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACAACTACCCGAATATCGTTGTCATCCGGTCGGCAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTTCATTTATTCGCCGTCGGTCGGGACGGGCGTCTCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCGAACTGGAGAACGACTTCCGCGTTTCGCGCGCGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TATATTGATTCGGTGTGCGAAGCCGCGCCCGCAACGAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGATGTGTTGTGACACTGGTACTGCTGATGGAACAACAGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGAACAGAAAACGGCGCGCGCGTTGACCGCGAGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TACTATAGGCTAGCCCTAGCCGTTTGCGCGCCTAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCTGACGTTGCTGCCGACGCTGATCGAGTTGGCGACGGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAGGTTTTTGGTTTGCCGACGTTTTCGTTGAGCGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCAGTCCGTCCCAAGGCTTGCCGATGCGCCGGGACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACCGCGCGCTGGTTGCGGACGCGGCGCGGGGTGTTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTGTTCGTCATATCGCACAGCCCGACCAGCCCATTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGATCATCCACACCGGCAACGGTCTGATGCCGATGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGAGGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGCGAGCCGAACCTGCTGAACATCCCGCGCGGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGGAGGCGGCGAAATGCTACCCGCGCGTGCTGTCGGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGCGCGTGGGACACCTCACGCGCTTCGGCGTTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGACGCGGTACAACTCGAAAAAGCGGCGCTTCTCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT

>NC_009523|49|6|2427547-2436730|PILER-CR
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTCGCCCGCTGGAGCATCGAGGTTGATGCGCGGAACAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGCGGGATCGGCGTGCTCATCAATCTCGCCCGCGAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAGTATAGTACTGGCGGTTGGTTGGTGAAAGACGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGACGTAATCGAGCGCGCTTAGTCCGGCGTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGTCGGTAACGGCGACTGGATCGCCAGCGCGTCGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTACGGCGCGCCAGGATGTATCACAAGTCGATACATCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAATACGAGAAGTTCGCGGGTCGAGACCGGGGCGCACC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGGAACACATCTTCCGGAGCAGTATCAACACCAGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGACACGCGGAACGAACCGCGCCGGTGTACGAGTTTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTCTTTCGGAGACCGGCGGCGATTGCGAAAGGGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGTCACCTCACGCGCTTCGGTGTGGATGGGTTTGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGTTGTGACAGCCCGCGCCCATCGCCTCGCCCGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGGCGCTCTCCGCCCCCTCCATTCTTATTATACCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAAGTTCGGCGCGACCGGACGATCCCGCATCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCGCGAAGGGCTTTCATACTTGGGTTCTCGGCGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GACGTTTTCGATACGCTTGACGCCGGAATCGCGCATC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGATGCGTTACTTCAGACGATAGACCGCGCGGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCGTCGCGCGAACAACACCGAAATCCGGTTAGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AACAACCCGCCGCGCTGCCAGACTTCCACCAGCGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGGACGGGTGCGATGTGGACGATCTCAATCCAACCGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATTACACAGAAGCCGTCGCACTCGTCGAAGTCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACGCACCATCAGCGCCACCCGCCGCTCGTCCATCCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGTTCCGTCGGCGCGCGTGTTGCGTCAGTTGTGCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCCGCGCGGTCGATCCGCGTCGTCGGAAGTTACAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAGATGCTGTGTTGTGACACTGCTGAAAGACAACGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGAGTCCTCGTTGTACAGCACTGTCAATGTGATCTCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATCAACGCGGCGGTGACGCTGTGGTTGTCGCCCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCGATCTCGACTTCCGCAGCGCCTTCGTTGCGCCGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACTCCCGTCTGAGCGTGAGGCGAAGCAAAGACGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AACTCTTGCACCTCTGGGAACCGTCGGTGAGGAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACCGACCGACGCCGAACGCTCGCGGTTTGAACAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGGCGTAACGGTCAACGTCGACGCGCTGCTGGCGGATT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGAATACGAGGGCGAGTTGATAGGCGTCTGGAAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTCCAAGACCCGAAAATCATTGATATCGAGGTCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATTCCGGAACACCGCCCCGCCGTCGTCGAGAAACT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCCCAGCGCGCCGCGCGCTGCCAGACATCCGCGTCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTCAAGCCCCAATTTTGCGGAAAATCCGGCGATTTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TAACCCGGAGCGGCGGATCGTCGTTATACGCCCTAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTCGCCACTGAAGATTAGGCATATCAAAGTCCCGTGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAGTCGAGCGCTGTAATGCGCGTTCGATCCGATCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGAGTACGCAAGATTCAGGTTTACCGTTGTTGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAGGAGAGCGCATTTAGGATCGTAGCCAGCAATTGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGACGCGCATATGATCCTCTCCTGTTGACGTGATAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCCCTTGCCATTTGCGCGCCTAGCGGCTACCTGACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAATATCCGCACAATCCTAAACGCAATTATTCAGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCGCGGGTTTATACAAGCCCGCTTGGATAGGGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTATCGCGCGCGTACACGCATTGCCTGACACACAATGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTGCGACAGCACAGGTATGAAGCAATGGTACAGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAATATTTTCAGTTTATCCATAATCAACCTCAATCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACCCGTACTGTCTCTGCCTTGCCCTTGCGGTTCATCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAAGATAAGCCTTATACGCCGTATCAGCAAGTGTA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTAGGCTATCGGCATTATGATGATAGGGTTTTGGTACAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGGTTCAAAGGGCTAAGCAAAGACGGTGTTTTTGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGAGAGGTGATACGTTATATGTGGGAAGTCCAAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GAAACACCGTGAAACTCCGTAAAACATCATATCACGAAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGAATCTATGTCTTGTTGTGCGCAAAAATGTTACATAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATTGTGACCGTTGTAGGCTACGCTCGGACGGTGAGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGGCATATCGGGGCTACTGGTGTACCGAAAGCAGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTACCACGCGCTTGCGCTAGCCGTATGCGCGCCTAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAACCCGGTACGAATCGAAATTGACGCGCATAGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGAACCCCGCCGACGCCGGCGGGGTTTCCGGTCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CACCGACAACGCTGACGTTCCAGAACCAACCGGTTGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGAAGGGATGTCTCAAAGTGGGGATGGATCGAGTTCGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTCTTCAGTTTCGCCGCGAACTCAACGGAGATTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTGCCGATATCCGCGAATTACTGAAGAATATGGTGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCCGTCTGGTTCGACGCGGCGCGCTGGGCTGTCGAGTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGATAGTGGTCATAAACCGCTCTCAGGAACGTATCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGCGTCTACCAGACGCTGGACGATGCGCGGAAGGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGGCAGAAGGGGGGTGATCATATGGCGCTTGTCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTTCCGAACATCAGCGCAATTATACGAATTGTGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTGTGACCGAGTGCGGCTACACGACGTTGCTTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGAGCGCGTGGCGGGTGTTTAGGTCGCTGAGTTAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATCATCGACATCCACCCAGCGCGTGCAATCGACCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTAAGCGAGCGGCGGCGCGGTTGGTGGCGCGCCGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGATTGCGGCCAAAAGCCAAACGTCGAATCAAGTTCTTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACGACCCGACAAAATGACCGCATTTTACGAAGCAGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GAGGAATTGCGCTTCGAGATCGACCGCGCCCGCGCCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTCGATGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGGCAGACAAACGCCGGATTTTGGTTCGCCGACGCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCCTGCAGCGTCTCCTTGCCGACGCCCCGCGCGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCTCGGCGTCGTTGAGGTAGCGCGCGCAGACGACT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGTGAGGAGCGGTCGCCGGGCAAACGCGGCGAAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCTGACCGGGCGGGTGCATCCACACTTGAAGATCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCATCCGTTGTCGGACGGGGCTTGTCGGATTCGGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCCTTCGGGTCGCGCACCCCCAGCGCCGGCGCGTCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAGTCGCAGCGCCTTATAGAGCAGCGCCTCGGCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCATAATGCGGTGGGGTTGGAGGTGCGTCCGATTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTCGCCGGTTCCGGCGCGCCGTTCGCGCGCGAAACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACGAAGCGGCGCAATTCTTCCGAGAATTCAGTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAAAGCGCGTTTGATTATTCTCGCCGACGCCGACGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGACCGCTTTCGTCCAGTCCTCAAGTTCTTGATGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCGGTCGTTAGCCTAGCACACAAGTTCCCGTCTGTCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGTCGTAGTATCGGTCGCTGTTGCGAAGGACAACGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTGGTCTCAACGTACACGTTGATCTCGCGCTCAAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTCGATAGTAGCGTTCGCTTCCCAGCGACCGTCAAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTGCGCCCCAGTCGTCGAGCGCCGCAAGCAGCGCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTGGTGGCGCTGCTGCTCCGCGACCCAGCCGTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATCGCCCGTCACACCTTCCCCCGCCGCCGGGCGAACGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGAGACCGCGCCCGCCAGCGACCGGTTCTTCTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAGCGATTGAACCACATCAAGCGCTTCGTCGCGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAAAAAGAGCGCGAATCAGTTCTTCCGCCTCCGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAACATTCCCACTATTCGCGCCCCGGTACACCGCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACAACTACCCGAATATCGTTGTCATCCGGTCGGCAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTTCATTTATTCGCCGTCGGTCGGGACGGGCGTCTCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCGAACTGGAGAACGACTTCCGCGTTTCGCGCGCGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TATATTGATTCGGTGTGCGAAGCCGCGCCCGCAACGAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGATGTGTTGTGACACTGGTACTGCTGATGGAACAACAGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGAACAGAAAACGGCGCGCGCGTTGACCGCGAGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TACTATAGGCTAGCCCTAGCCGTTTGCGCGCCTAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCTGACGTTGCTGCCGACGCTGATCGAGTTGGCGACGGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAGGTTTTTGGTTTGCCGACGTTTTCGTTGAGCGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCAGTCCGTCCCAAGGCTTGCCGATGCGCCGGGACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACCGCGCGCTGGTTGCGGACGCGGCGCGGGGTGTTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTGTTCGTCATATCGCACAGCCCGACCAGCCCATTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGATCATCCACACCGGCAACGGTCTGATGCCGATGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGAGGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGCGAGCCGAACCTGCTGAACATCCCGCGCGGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGGAGGCGGCGAAATGCTACCCGCGCGTGCTGTCGGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGCGCGTGGGACACCTCACGCGCTTCGGCGTTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGACGCGGTACAACTCGAAAAAGCGGCGCTTCTCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT

>NC_009523|49|46|2427547-2436730|CRISPRCasFinder
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTCGCCCGCTGGAGCATCGAGGTTGATGCGCGGAACAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGCGGGATCGGCGTGCTCATCAATCTCGCCCGCGAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAGTATAGTACTGGCGGTTGGTTGGTGAAAGACGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGACGTAATCGAGCGCGCTTAGTCCGGCGTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGTCGGTAACGGCGACTGGATCGCCAGCGCGTCGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTACGGCGCGCCAGGATGTATCACAAGTCGATACATCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAATACGAGAAGTTCGCGGGTCGAGACCGGGGCGCACC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGGAACACATCTTCCGGAGCAGTATCAACACCAGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGACACGCGGAACGAACCGCGCCGGTGTACGAGTTTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTCTTTCGGAGACCGGCGGCGATTGCGAAAGGGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGTCACCTCACGCGCTTCGGTGTGGATGGGTTTGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGTTGTGACAGCCCGCGCCCATCGCCTCGCCCGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGGCGCTCTCCGCCCCCTCCATTCTTATTATACCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAAGTTCGGCGCGACCGGACGATCCCGCATCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCGCGAAGGGCTTTCATACTTGGGTTCTCGGCGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GACGTTTTCGATACGCTTGACGCCGGAATCGCGCATC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGATGCGTTACTTCAGACGATAGACCGCGCGGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCGTCGCGCGAACAACACCGAAATCCGGTTAGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AACAACCCGCCGCGCTGCCAGACTTCCACCAGCGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGGACGGGTGCGATGTGGACGATCTCAATCCAACCGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATTACACAGAAGCCGTCGCACTCGTCGAAGTCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACGCACCATCAGCGCCACCCGCCGCTCGTCCATCCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGTTCCGTCGGCGCGCGTGTTGCGTCAGTTGTGCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCCGCGCGGTCGATCCGCGTCGTCGGAAGTTACAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AAGATGCTGTGTTGTGACACTGCTGAAAGACAACGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGAGTCCTCGTTGTACAGCACTGTCAATGTGATCTCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATCAACGCGGCGGTGACGCTGTGGTTGTCGCCCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCGATCTCGACTTCCGCAGCGCCTTCGTTGCGCCGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACTCCCGTCTGAGCGTGAGGCGAAGCAAAGACGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AACTCTTGCACCTCTGGGAACCGTCGGTGAGGAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACCGACCGACGCCGAACGCTCGCGGTTTGAACAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGGCGTAACGGTCAACGTCGACGCGCTGCTGGCGGATT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGAATACGAGGGCGAGTTGATAGGCGTCTGGAAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTCCAAGACCCGAAAATCATTGATATCGAGGTCTGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATTCCGGAACACCGCCCCGCCGTCGTCGAGAAACT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCCCAGCGCGCCGCGCGCTGCCAGACATCCGCGTCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTCAAGCCCCAATTTTGCGGAAAATCCGGCGATTTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TAACCCGGAGCGGCGGATCGTCGTTATACGCCCTAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTCGCCACTGAAGATTAGGCATATCAAAGTCCCGTGTT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAGTCGAGCGCTGTAATGCGCGTTCGATCCGATCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTGAGTACGCAAGATTCAGGTTTACCGTTGTTGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAGGAGAGCGCATTTAGGATCGTAGCCAGCAATTGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGACGCGCATATGATCCTCTCCTGTTGACGTGATAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCCCTTGCCATTTGCGCGCCTAGCGGCTACCTGACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAATATCCGCACAATCCTAAACGCAATTATTCAGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCGCGGGTTTATACAAGCCCGCTTGGATAGGGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTATCGCGCGCGTACACGCATTGCCTGACACACAATGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTGCGACAGCACAGGTATGAAGCAATGGTACAGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAATATTTTCAGTTTATCCATAATCAACCTCAATCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACCCGTACTGTCTCTGCCTTGCCCTTGCGGTTCATCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGTAGTGACGGGTTCAACTCCCCTGGTACTAATCAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAAGATAAGCCTTATACGCCGTATCAGCAAGTGTA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTAGGCTATCGGCATTATGATGATAGGGTTTTGGTACAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTCTGGTAGCGCGCATTTTCGCCGCGCGTATCGTCT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGGTTCAAAGGGCTAAGCAAAGACGGTGTTTTTGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGAGAGGTGATACGTTATATGTGGGAAGTCCAAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GAAACACCGTGAAACTCCGTAAAACATCATATCACGAAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGAATCTATGTCTTGTTGTGCGCAAAAATGTTACATAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATTGTGACCGTTGTAGGCTACGCTCGGACGGTGAGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGGCATATCGGGGCTACTGGTGTACCGAAAGCAGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTACCACGCGCTTGCGCTAGCCGTATGCGCGCCTAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAACCCGGTACGAATCGAAATTGACGCGCATAGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGAACCCCGCCGACGCCGGCGGGGTTTCCGGTCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CACCGACAACGCTGACGTTCCAGAACCAACCGGTTGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGAAGGGATGTCTCAAAGTGGGGATGGATCGAGTTCGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTCTTCAGTTTCGCCGCGAACTCAACGGAGATTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTGCCGATATCCGCGAATTACTGAAGAATATGGTGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCCGTCTGGTTCGACGCGGCGCGCTGGGCTGTCGAGTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGATAGTGGTCATAAACCGCTCTCAGGAACGTATCA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	AGCGTCTACCAGACGCTGGACGATGCGCGGAAGGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGGCAGAAGGGGGGTGATCATATGGCGCTTGTCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTTCCGAACATCAGCGCAATTATACGAATTGTGAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTGTGACCGAGTGCGGCTACACGACGTTGCTTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGAGCGCGTGGCGGGTGTTTAGGTCGCTGAGTTAGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CATCATCGACATCCACCCAGCGCGTGCAATCGACCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTAAGCGAGCGGCGGCGCGGTTGGTGGCGCGCCGGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTGATTGCGGCCAAAAGCCAAACGTCGAATCAAGTTCTTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACGACCCGACAAAATGACCGCATTTTACGAAGCAGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GAGGAATTGCGCTTCGAGATCGACCGCGCCCGCGCCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTCGATGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGGCAGACAAACGCCGGATTTTGGTTCGCCGACGCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGCCTGCAGCGTCTCCTTGCCGACGCCCCGCGCGGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCTCGGCGTCGTTGAGGTAGCGCGCGCAGACGACT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGTGAGGAGCGGTCGCCGGGCAAACGCGGCGAAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCTGACCGGGCGGGTGCATCCACACTTGAAGATCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCATCCGTTGTCGGACGGGGCTTGTCGGATTCGGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCCTTCGGGTCGCGCACCCCCAGCGCCGGCGCGTCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCAGTCGCAGCGCCTTATAGAGCAGCGCCTCGGCGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCATAATGCGGTGGGGTTGGAGGTGCGTCCGATTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGTCGCCGGTTCCGGCGCGCCGTTCGCGCGCGAAACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACGAAGCGGCGCAATTCTTCCGAGAATTCAGTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAAAGCGCGTTTGATTATTCTCGCCGACGCCGACGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGACCGCTTTCGTCCAGTCCTCAAGTTCTTGATGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCGGTCGTTAGCCTAGCACACAAGTTCCCGTCTGTCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGTCGTAGTATCGGTCGCTGTTGCGAAGGACAACGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTGGTCTCAACGTACACGTTGATCTCGCGCTCAAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTTCGATAGTAGCGTTCGCTTCCCAGCGACCGTCAAT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCTGCGCCCCAGTCGTCGAGCGCCGCAAGCAGCGCGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTTGGTGGCGCTGCTGCTCCGCGACCCAGCCGTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ATCGCCCGTCACACCTTCCCCCGCCGCCGGGCGAACGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GCGAGACCGCGCCCGCCAGCGACCGGTTCTTCTTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAGCGATTGAACCACATCAAGCGCTTCGTCGCGG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCAAAAAGAGCGCGAATCAGTTCTTCCGCCTCCGCG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CTAACATTCCCACTATTCGCGCCCCGGTACACCGCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	ACAACTACCCGAATATCGTTGTCATCCGGTCGGCAAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGTTCATTTATTCGCCGTCGGTCGGGACGGGCGTCTCAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGCGAACTGGAGAACGACTTCCGCGTTTCGCGCGCGAA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TATATTGATTCGGTGTGCGAAGCCGCGCCCGCAACGAAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGATGTGTTGTGACACTGGTACTGCTGATGGAACAACAGC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGAACAGAAAACGGCGCGCGCGTTGACCGCGAGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TACTATAGGCTAGCCCTAGCCGTTTGCGCGCCTAG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCTGACGTTGCTGCCGACGCTGATCGAGTTGGCGACGGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CAGGTTTTTGGTTTGCCGACGTTTTCGTTGAGCGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TTCAGTCCGTCCCAAGGCTTGCCGATGCGCCGGGACG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGACCGCGCGCTGGTTGCGGACGCGGCGCGGGGTGTTG
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GTGTTCGTCATATCGCACAGCCCGACCAGCCCATTGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TGATCATCCACACCGGCAACGGTCTGATGCCGATGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGAGGTCGAGGTAGCGCTGGTTGATGCGCATCGCGTC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CGGCGAGCCGAACCTGCTGAACATCCCGCGCGGCGA
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	TCGGAGGCGGCGAAATGCTACCCGCGCGTGCTGTCGGT
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	GGGCGCGTGGGACACCTCACGCGCTTCGGCGTTGAC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT	CCAGACGCGGTACAACTCGAAAAAGCGGCGCTTCTCC
GTTTCAGTGCTCTTCAGCGAGCCGAAAATTCCTCAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956698.1|2445510_2447181_-|2-isopropylmalate-synthase	unknown	unknown	gnl|CDD|234864
NC_009523.1|WP_011956695.1|2441846_2442773_-|branched-chain-amino-acid-transaminase	unknown	unknown	gnl|CDD|235841
NC_009523.1|WP_011956683.1|2414745_2416947_-|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|143635
NC_009523.1|WP_011956699.1|2447208_2448231_-|ketol-acid-reductoisomerase	unknown	unknown	gnl|CDD|235491
NC_009523.1|WP_011956688.1|2423530_2424148_+|hypothetical-protein	unknown	unknown	gnl|CDD|223775
NC_009523.1|WP_011956686.1|2420274_2421351_+|chorismate-synthase	unknown	unknown	gnl|CDD|235438
NC_009523.1|WP_011956692.1|2438136_2438625_-|YqhA-family-protein	unknown	unknown	gnl|CDD|377024
NC_009523.1|WP_011956687.1|2421553_2423527_+|acetoacetate--CoA-ligase	unknown	unknown	gnl|CDD|235134
NC_009523.1|WP_011956684.1|2417201_2418794_+|amidohydrolase	unknown	unknown	gnl|CDD|224490
NC_009523.1|WP_011956691.1|2437020_2438124_-|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl|CDD|234832
NC_009523.1|WP_011956700.1|2448322_2448865_-|acetolactate-synthase-small-subunit	unknown	unknown	gnl|CDD|183365
NC_009523.1|WP_011956696.1|2442951_2444574_-|citramalate-synthase	unknown	unknown	gnl|CDD|237068
NC_009523.1|WP_011956682.1|2412155_2414723_+|penicillin-binding-protein-1A	unknown	unknown	gnl|CDD|273955
NC_009523.1|WP_011956689.1|2424234_2424636_-|response-regulator	unknown	unknown	gnl|CDD|333815
NC_009523.1|WP_011956685.1|2418827_2420258_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009523.1|WP_011956693.1|2438631_2439246_-|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl|CDD|179314
NC_009523.1|WP_011956694.1|2440365_2441790_-|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl|CDD|235490
NC_009523.1|WP_083763285.1|2426169_2427204_-|hypothetical-protein	unknown	unknown	gnl|CDD|227946
NC_009523.1|WP_011956697.1|2444613_2445453_-|prephenate-dehydratase	unknown	unknown	gnl|CDD|223155
NC_009523.1|WP_157041025.1|2425493_2426042_-|transposase	unknown	unknown	gnl|CDD|379129

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956698.1|2445510_2447181_-|2-isopropylmalate-synthase	gnl|CDD|234864	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated.	0
NC_009523.1|WP_011956695.1|2441846_2442773_-|branched-chain-amino-acid-transaminase	gnl|CDD|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
NC_009523.1|WP_011956683.1|2414745_2416947_-|GAF-domain-containing-protein	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	6.45654e-57
NC_009523.1|WP_011956699.1|2447208_2448231_-|ketol-acid-reductoisomerase	gnl|CDD|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NC_009523.1|WP_011956688.1|2423530_2424148_+|hypothetical-protein	gnl|CDD|223775	COG0703, AroK, Shikimate kinase [Amino acid transport and metabolism].	2.2134e-06
NC_009523.1|WP_011956686.1|2420274_2421351_+|chorismate-synthase	gnl|CDD|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
NC_009523.1|WP_011956692.1|2438136_2438625_-|YqhA-family-protein	gnl|CDD|377024	pfam03350, UPF0114, Uncharacterized protein family, UPF0114.	7.74336e-27
NC_009523.1|WP_011956687.1|2421553_2423527_+|acetoacetate--CoA-ligase	gnl|CDD|235134	PRK03584, PRK03584, acetoacetate--CoA ligase.	0
NC_009523.1|WP_011956684.1|2417201_2418794_+|amidohydrolase	gnl|CDD|224490	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].	1.2714e-159
NC_009523.1|WP_011956691.1|2437020_2438124_-|3-isopropylmalate-dehydrogenase	gnl|CDD|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NC_009523.1|WP_011956700.1|2448322_2448865_-|acetolactate-synthase-small-subunit	gnl|CDD|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	3.47115e-80
NC_009523.1|WP_011956696.1|2442951_2444574_-|citramalate-synthase	gnl|CDD|237068	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional.	0
NC_009523.1|WP_011956682.1|2412155_2414723_+|penicillin-binding-protein-1A	gnl|CDD|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NC_009523.1|WP_011956689.1|2424234_2424636_-|response-regulator	gnl|CDD|333815	pfam00072, Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	1.88854e-15
NC_009523.1|WP_011956685.1|2418827_2420258_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.58525e-06
NC_009523.1|WP_011956693.1|2438631_2439246_-|3-isopropylmalate-dehydratase-small-subunit	gnl|CDD|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	2.08122e-118
NC_009523.1|WP_011956694.1|2440365_2441790_-|3-isopropylmalate-dehydratase-large-subunit	gnl|CDD|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NC_009523.1|WP_083763285.1|2426169_2427204_-|hypothetical-protein	gnl|CDD|227946	COG5659, COG5659, FOG: Transposase [DNA replication, recombination, and repair].	9.46475e-10
NC_009523.1|WP_011956697.1|2444613_2445453_-|prephenate-dehydratase	gnl|CDD|223155	COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism].	2.27471e-102
NC_009523.1|WP_157041025.1|2425493_2426042_-|transposase	gnl|CDD|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	6.95253e-21

Protein sequences

>NC_009523.1|WP_083763285.1|2426169_2427204_-|hypothetical-protein
MAPLLGRCGQSPPHRVCALKVAGERNGLSGRLAQPGRAQEWLATGRNHRPSQPLSRAGVAEPGYLGPRRAARPAAARCAGLSGRPRRDWRAGRDGLPQERRHVGGGGAPGLRRRWTGRELPGGGRADLCQRPRPDPARPRALSAAQLDGRLRALSPGRDPSERTFATTPELARQPLERAYAAGVTSAAIAGDSVYGDDRELRQWLEARHQPSVVTISSTEHRWLGHESWSLADLSARLATRPWERLSCGAGSQGPRWYDWRRVRLNGPAAPGGRRWLVLRRSCTDPTEVRAYGPEATPLDTQVRVIGKRWTVEESIQTGKSEVGLDECEVRSWTGWYRHSTLAM
>NC_009523.1|WP_157041025.1|2425493_2426042_-|transposase
MSSGEGRQLFWNVVLAVAQPCAHILHWSWQRRCHHALAQAAHCRRRARQLPPVVVAAADGLNLPAPAVIALPNGEPPAVEGANPPGEATREEIIAQVWARVAPLLPVPRRAGRQIVHDRRQILEAMVHVMHTDCGWSALPSHFPPGKTVHDHSVTWRKTGIWAQIWVGLRLPGARPFEQLQL
>NC_009523.1|WP_011956689.1|2424234_2424636_-|response-regulator
MQHILVVDNDPVAAMVTQQGLQLLLGKDVEVSLAPSPGAAWLRCMRESVDLLIVDPSPPGRAAAALIKALHDERPHIPVVVLTAYDTPRLRSQMKRMGVRHYLAKPVELAELKNTVSGVLASLNNAQASPVMH
>NC_009523.1|WP_011956688.1|2423530_2424148_+|hypothetical-protein
MVIGLIGMAGIGKSRWAARLADAGFTTLHCDDLIAERLRIEHNADTVTVYDIGRWMGFPYEAHYAARERTYLACEQEVMVRIAERIAEEDNIVIDMTGSVIYLDAALIQRIRRHATMVYLADDPELRKQLLEEYLARPRPIVWNGMYQPRPDESPAATLARCYPHLVHDRAARYRQIGDVMLEPAYHRNPAFTVADFLAAIKAKG
>NC_009523.1|WP_011956687.1|2421553_2423527_+|acetoacetate--CoA-ligase
MAEPTVREGDLLWSPSPDMMRASVMQRYIDWLAQTRGVTFADYHALWRWSVTELSDFWQSIWDFFDIQATTQPHAVLADARMPGAVWFPGATLNYAAHAFRHASADRPAILFQSEGEALQTLTWAELQRQVASVAAHLEMLGVRRGDRVAAVLPDTPHAVIAFLACASLGAIWSSCSPEMGVASVADRFRQIEPRVLIAVDGYRYGGRAFDRRAALAELRSTLTSVEHVVIVPYLDPDAQVADAIPWNECLRHDASLRFEPVPFDHPLWILYSSGTTGLPKPIVQGHGGILLEHLKSLALHLDLGPQDRFFWFTTTGWMMWNFLTSGLLVGSTLLLYDGNPAWPDMHALWRFAADTRMTLFGTSAAYLTACRKANIAPGTTFDLSSLRAIGSTGSPLPVEGFRWVYERVRRDLWLVSLSGGTDVCTAFVGGCPLLPVTAGEIQCRCLGARVDVFDEQGNSLVGDVGELVVTAPLPSMPLFFWGDADGSRYRTSYFDVYPGVWRHGDWVKLTERGTLVIYGRSDSTINRHGVRMGTSEMYRAVEGIAEVRDSLVIDLENPDGTATMYLFVALETGVTLDDALKERIRATIRAALSPRHVPDVIIAIPDVPRTLNGKKLEVPIKKILRGVPPEKAANRDAMANPQTLDAFVELAARLQR
>NC_009523.1|WP_011956686.1|2420274_2421351_+|chorismate-synthase
MPGNTFGQVFRLTTWGESHGPAVGCVVDGCPAGIEISEAFIQRELDRRRVGQSRVTSARQEPDQVQILSGVFEGRSTGAPISMLVFNTDAKPGHYDTIKHLYRPGHADYTWDAKYGFRDWRGGGRSSARETIGRVAGGAIAKLLLARYGISVIAWTSQLGDLKAEVIDESEIERNIMRCPDARVAALMVERVEQARRSLDSLGGVVEVRARGVPPGLGEPVFDKLQADIGKAMFSIPAIKGVEFGEGFGVAYMTGSTHNDPFVRRDDGTIGTASNHHGGILGGISTGEEIVLRIAAKPPASIARPQHTVDRAGNPAAIEIHGRHDPTVLPRLVPIAEAMLALVLADHLLRQRLARVDA
>NC_009523.1|WP_011956685.1|2418827_2420258_+|tetratricopeptide-repeat-protein
MNADTLHQAIAAARDGRRDDARALLLHLLEADPRNERAWLWLSGVVDDPEDVKICLENVLALNPSNPRARQGLEWLHARMGLPLPPLPPPDQTGSRLEREIDTRALSVARLRAYRTTLAVVEPVAPLPPKPDPISAPVPSTPQSRSVATRANPAPAPPASAPAAATARTAVAPLSTAPAHRLAAVAPVDDATIPCPYCGAPTVETQRRCTQCGGNLLVRVAPSDERSPIVQALVWMWRGGAVVVLLIALVFPVMGVLLYQEAPANGFPIGILIPAVILALVALIGFSVAQQLAQRAAWALYLAAGLTTVGLIGALALAMRPDTLTAMLDRLTGATSIPSAWLPPLMAGARLIAIGAGVAHLAAIALTIAGYDAIVGRLERFRHILKPSDHLTHYNNGVALKNRGMWYVAALEWEWAVKKAPYDVTYLRALGLAYARLKQFDKARSMIDRALQAAPDNPGLREDRALIERLASQEQR
>NC_009523.1|WP_011956684.1|2417201_2418794_+|amidohydrolase
MNDPIILYNGPVYTLNPAQPRAQAVAVRDGRIIAVGSEGKVRAAVTGRAEGINLNGRALIPALTDAHVHLVAHALARRNIALDDAATLDEALQRIDAAAQHLPEGAWVRGRGWDHSRWGRWPTAAHLDAVIGDRPAYFSRKDGHSAWVSSAALRLAGITGDTPDPPGGAIQREHGEPTGILLETAIDLVHRHIPEPEQDERLAAVREAITEAHSYGMVGMHLPASMTPGDGAQTLSDVQTLREHDHLHLRCLVYFGLDELDAALALGIRSGLGDRWVRIGGVKIFADGSLGSQTAEMLAPYEGSSNRGIAVLSFDDLRDAVRRSIHGGLAVMIHAIGDAANRKVLDAIEAALPGAPALRIPNRIEHCQVVHPNDLPRFARLGVIASMQPIHCTTDMAMAEQLWGRRCAYAYAWRALLNAGATLAFGSDAPVESLNPWLSIHAAVTRQRLDGEPAGGWYPEQRLTVEEALRGFCSGSATAAGTAHEQGMIAPGMLADLAVLSADPFKIDPSALHTVRADMTMLEGRIVWEG
>NC_009523.1|WP_011956683.1|2414745_2416947_-|GAF-domain-containing-protein
MNESEHLQSENDALRTRIRELERQLHHARSFASFPPYVSPAVSDYFTAFHETTLAIMNRLELNDVLEAIVEHAARLAGTEHGYIHLRLADAELMEMKVGIGRFALNRGSVIAPGEGVSGRVWQSGEPMMVEDYRSWEGRIERLEMIDFGAVIAAPLKSRGDVIGVLGVAYDAANPFDFHTIAALLARFADLAAIAIDNAQLYTAAQREIAERQRIEAELRASAQHLHDLYTVTKRQAQELRLLGQVRSVLARAIDLSVIFYSVVEAIARTFGYTQVCIYLREHDELVLQHQVGYSHIPERIPFGKGIISRTILSERPALIADVSADSDFLGAIEGVVSEICVPLWEDDRVIGALNVESINGVVLTEDDLRLMTELAEHIHVAIERARLYERLWQRVQQLDALYSIMGDITGNLNLDDVLRAIVTRMLTLIRAAHGALALYDAQQNHLIVHVSVNMDYDYAGVRLALGEGAMGKAALTRQPVVVCDYRAWSERSLQCEAESTANVLAVPLLAGDELIGAMSAGDGDLKRIFTADDIRLLSMFAQQATVAIKNARLFEEVQYLAITDPLTGLYNRRYFLSAARRELERAHRHHSPLVVIIADLDDFKRINDDFGHPVGDRALRAFSDLLRRELRSIDLVARYGGEEFILLLPETDENGGVQVVERVRLLWSQTTIATGQGVARMTSSFGMAVYAEPFDGMSIDTLVARADEALLCAKQAGKNRLEIWQLQVEGGR
>NC_009523.1|WP_011956682.1|2412155_2414723_+|penicillin-binding-protein-1A
MQVKPNSGSIYWRGFIALIRFLWRLCLAFVKLTIVATILTALAVFVVYRHYSRDLPDPAQIGRHRPAETGYIYARDGTLLYELIDPLSGRRTVVPFERIPRILIDATVAVEDAGFWTNPGVDLRGILRALILNYQAGEVVSGGSTITQQLVRNVLLSPDERDDLSLDRKLREAILAIEVSRRYSKEQILGVYLNEVYYGNQAYGIEAAAQSYFGKHVWELSAGEATLLAGLPQSPTTLNPLHNFAGAKQRQRTTLDLMVKYGYLTATEAQEIFEEPLRFAPIARDITAPHFVFYVIRLLEERYGPETLYRSGLRVVTTLDPQWQAEAERIARQWIREGGPGYTPLRDRNATNAGVVMLTPDAQIIAMVGSIDYNDPTIDGQVNVTLAPRQPGSALKPVVYAAALQRGWTPATIIWDTPVTYPAGDGTVYAPRNYDNAFHGPQRLRMALANSLNIPAVRTLEYVGIENFVSLAHRMGITTLNDPQRYGLPLALGAGEVRLLDLTAVYNTLRNGGRYRPPAAILKITNARGETLETLNDTPGRQTLGERGEQIAYLITDILSDNAARRSMFGRNNVMELRDGRPAAVKTGTSNEWRDSWTVGYTPDITIGVWVGNNDNAPMQEVAGSNGAGVIWRALMERYHEGRPILTFEPPDGISEVVICADTGALADEHCPRPISERFIAGTEPRTSDVTILTVRVSDDGACLAASYTPPERVRQVTFVVYPLAFRDWAESHGIPQPPQRYCPPPEASTGREGGIIARITQPITNTTVHGPLVYVRGAALGVYALEIAPGRSPQGGWRTIARGEAIQEGMLGIWQTGDDAPGEYTLRLRVTTREGILLEQHVWVRLEGEAGSGN
>NC_009523.1|WP_011956691.1|2437020_2438124_-|3-isopropylmalate-dehydrogenase
MHAVITALPGDGIGPEVVAEGRRVLEAVGERFGHTFDMREALIGGCAIDAVGTALPDETLRLCRESDAVLLGAVGGPKWDNPDAPVRPEQGLLGIRKALGLFANLRPVTLHPRLIAASPLRPERLQGVDLIVVRELTGGIYFGEKGRDTTPDGGESAYDECVYTTAEIERIVRTAATLARQRRKKVTSVDKANVLETSRLWRSVTTRVMRDEFPDVHLEHMLVDACAMHLIRRPSDFDVIVTENMFGDILTDEASMLAGSMGMLPSASLGAPGDTGRTTRMGLYEPIHGSAPDIAGKGIANPLATILSVALLLRHSLGLEREARAVETAVWRTIEDGIVTADIAAPDERPATTTDVGAAVAARVIVG
>NC_009523.1|WP_011956692.1|2438136_2438625_-|YqhA-family-protein
MTRLIGLIRYIIIVAVLATLIAATALILFGTVETYVVIRDVFSKGEFTSKVAKALLLSFIEITDIFLLATVLYIVALGLYELFIDHQVPVPNWLEIRTLDDLKDKLIGVIIVVIGVGFLGQFTTWNGETNLLISGGGAALVIAALTFFLGQKSKKDKDQDKE
>NC_009523.1|WP_011956693.1|2438631_2439246_-|3-isopropylmalate-dehydratase-small-subunit
MQPISVITGRIVALPVQDIDTDQIIPARYLKVTDKSGLAEGLFYAWRFDADGKPNPDFVLNRPETQGATILVAGRNFGCGSSREHAPWALLGYGFKAVISPYFADIFRNNALKNGLLTVQVDDETYQQLVSLFDEDPTTTVTIDLAAQTVTLPDGRGVHFPIDPFTKHCLLHGVDQMGFLLNEEAAISAYEASRPARVVTTARS
>NC_009523.1|WP_011956694.1|2440365_2441790_-|3-isopropylmalate-dehydratase-large-subunit
MTPRTLFDKVWDAHIVRPQTAETPAVIYIDLHLIHEVTSPQAFTELRQRGLKVRRPDRTLATMDHSTPTTPRGADGIIPVVDAQAAAQLRQLEQNCAEFGIPLFALGSEYQGIVHVIGPEQGLTQPGMTIVCGDSHTSTHGAFGALAFGIGTSEVAHVLATQCLIQTRPKTMEVRVDGRLAPGVTAKDIILAIIARYGVGAGTGHVFEYTGETIRALSMEERMTICNMSIEGGARAGMIAPDDTTFEYIAGRPFAPKGKAWDEAVAYWRTLPTDEGAVYDRIITLDASQLTPMITYGTNPGMGMPIDGRIPTPEELPDPAARQALDKALRYMDLRPGQPLLGHKIDVVFLGSCTNSRISDLRMAARLLKGRKIADGVRMMVVPGSQQVKKQAEAEGLHEIFRAAGAEWREAGCSACLGMNDDKVPPGRYAVSTSNRNFEGRQGPGARTFLASPLTAVASAIEGAVADPRRYLGG
>NC_009523.1|WP_011956695.1|2441846_2442773_-|branched-chain-amino-acid-transaminase
MPIRESKYIWFNGEMVPWEKATVHVMTHALHYGSSVFEGIRAYETPQGAAIFRLREHIRRLFDSCRIYRMDPPFTPDQVFEACRAVVRENGLQNAYIRPLVWRGYGEMGLNPLRSPVEVMVAAMEWGAYLGAEGLEHGVDVHVSSWQRVAPNTLPAMAKAGGNYLSSQLIVMEAARNGYAEGIALDVHGWLSEGSGENLFLIRDGVIYTPPVTAALLPGITRDAVITLAQQLGYQVREQNLPREMLYLADELFFTGTAAEVTPIRSVDKLPVGSGKRGPITTAIQKAFFGLFSGETEDRWGWLTPAAE
>NC_009523.1|WP_011956696.1|2442951_2444574_-|citramalate-synthase
MQILLYDTTLRDGTQREGLSLSVEDKLKIARELDLLGVHYIEGGWPGSNPKDAEFFQRIRRVTLRHAKIAAFGSTRHADATCDADANIQALVEADTPVVTLVGKSSTLHVEKVLETTPRENLAMIGDSVAYFKERGKEVVYDAEHFFDGYKLDAAYALATLTAAARAGADCLVLCDTNGGSLPDEVAAVVQVVRQHLAQEGFDVGTPDARLTLGIHTHNDGALAVANAIAAVRAGCIHVQGTINGYGERCGNMDLIPLIANLQLKLGYRCVTPEQLRRLTEVSHYVAAVANLNPDTHAPFVGHSAFAHKGGIHVAAVAKIPDSYQHIDPELVGNRMRIVVSELSGRGNVRMRAQELGLELNGNERVVLQRIKELENRGFQFEAAEGSFEMLVRRAAPDYEPPFELLDFTVVVSKHGDRDMTSQAMVKLRVGDEVMHTAAEGAGPVNALDRAIRKALLPHYPELADVQLVDYKVRIVDEHLGTAAKPRVLIESARGEERWSTVGCSENIIEASFMALWDSLELPLARRRAMAKATTESLQG
>NC_009523.1|WP_011956697.1|2444613_2445453_-|prephenate-dehydratase
MTCSIAYLGPPGSYSEIAALAYGGERAICIPLASMPAVVTAVETGAATAGILPIENVLEGSVTTTLDLLIHETDLRIAGETVIPIRHYLVGRPGLALHEIKVLYGHPQSLGQCRRFIERCLPGVATVASLSNSAAPAEALADERPAAAIGTLRAAELVGAAVIASDIQDRSGNVTRFIALGRHDHPPTGDDKTSFCFGFDREDRPGVLVDALQELASVGINMTKLESRPSKEVLGQYIFLVDINGHREDPTVAAALERIRAKTGLFKVFGSYPRWRGPQ
>NC_009523.1|WP_011956698.1|2445510_2447181_-|2-isopropylmalate-synthase
MEDHVRIFDTTLRDGEQAPGCTMTLEEKLEVARQLARLGVDIIEAGFPAASPGDWAAVHEIARTVGTPDGPIIAALARANKDDIDKAWSAIQPAAKKRIHTFISSSDIHIEHQLRSTREEVLERARMMVRYARSLCDDVEFSPMDATRSDPEYVYRMLAAVVEEGATTLNIPDTVGYATPEEYAELIAGIYRHVPGAEKVIISTHCHDDLGMAVANSLAGVRAGARQIECTINGIGERAGNASLEEVVMALKTRRSFFGVDTRINTRELARSSRLVSTIIGMPVPPNKAIVGANAFAHESGIHQDGVLKHRMTYEIMDATTIGLDGNAIVLGKHSGRNALRTKLAAMGYEFDSEEEFNQVFQRFKELCDKKKVVDDRDLEVLATGGSLHTPDLYRLDHVQVTCGTGVTPVATVRITDPDGNTHTTAAHGTGPVDAIYKAIDKIVGRPNELIEFSIKAVTEGIDAVAEVSVRIREPGNEVQEGEYRVGRHRGPQIYSGYSANTDTIVAAAESYMTALNKMIAARQERLSAENAAYAAGYDRNKPTYAVDLFGKNATE
>NC_009523.1|WP_011956699.1|2447208_2448231_-|ketol-acid-reductoisomerase
MANIYYENHADLSRLAGRTIAVIGFGSQGHAHALNLRDSGCDVVVGLYHGSKSWSKAEGLGLKVLPVADAAKEAQIIMLALPDTAQAAIYRDEIGPSMTPGKTLMFAHGFNIRFGQIVPPEGVDVSMVAPKAPGHRVREVYTQGGGVPALVAVHQDASGHALADALAYARGLGCTRAGVIETTFAEETETDLFGEQVVLCGGVSALVKAAFETLVEAGYQPEVAYFECMHELKLIVDLFYQGGLNYMRYSVSDTAEWGDYTAGPKIITDETRATMKRILADIQSGAFAEDWIEENHNGRPRFNAYRTRDISHPIEQVGRELRRMMPFVNPREVVPGEGGA
>NC_009523.1|WP_011956700.1|2448322_2448865_-|acetolactate-synthase-small-subunit
MKKHTIVALVQDRPGVLSRVVGLIRRRGYNIESLAVGHSETPGVSRMTIVVEWEDVEQVVKQLYRLIEVLKVSDVTNDPTVEREMALMKLHAPPAKRPEIVALTEVFDAKIVDVGANTMVIEMTGSPSKVQNFIDVIRPYGIREMMRTGRIAMVRGARGHNAEEYVENANGHAERVPVMN

Crispr_ID: NC_009523_50

• CRISPR_ID: NC_009523_50
• CRISPR_location: 2491828-2491926
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: DEDDh

Consensus repeat of NC_009523_50

Consensus_repeat	Method
GGCGAAGCCCGCCTGCGCGGGCTAGAGCGGA	CRISPRCasFinder

spacers of NC_009523_50

>50.1|2491859|37|NC_009523|CRISPRCasFinder
ATAATTACTCAATGACCATAAGCCCTCGGCTATCCAG

CRISPR arrays and Neighbor proteins around NC_009523_50

CRISPR arrays

The CRISPR arrays of NC_009523_50

>merge|NC_009523|50|2491828-2491926|CRISPRCasFinder
GGCGAAGCCCGCCTGCGCGGGCTAGAGCGGAATAATTACTCAATGACCATAAGCCCTCGGCTATCCAGGGCGAAGCCCGCCTGCGCGGGCTAGAGCGGA

>NC_009523|50|47|2491828-2491926|CRISPRCasFinder
GGCGAAGCCCGCCTGCGCGGGCTAGAGCGGA	ATAATTACTCAATGACCATAAGCCCTCGGCTATCCAG
GGCGAAGCCCGCCTGCGCGGGCTAGAGCGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157041031.1|2492448_2492661_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956745.1|2502737_2502965_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956747.1|2503974_2504685_-|isoprenyl-transferase	unknown	unknown	gnl|CDD|259850
NC_009523.1|WP_011956740.1|2489677_2491396_-|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl|CDD|273193
NC_009523.1|WP_011956744.1|2500831_2501896_+|DUF2157-domain-containing-protein	unknown	unknown	gnl|CDD|378311
NC_009523.1|WP_011956736.1|2483933_2485853_-|acetate--CoA-ligase	unknown	unknown	gnl|CDD|234677
NC_009523.1|WP_011956734.1|2481278_2481827_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NC_009523.1|WP_011956748.1|2504803_2505361_-|ribosome-recycling-factor	unknown	unknown	gnl|CDD|178850
NC_009523.1|WP_011956739.1|2487794_2489666_-|cyclic-nucleotide-binding/CBS-domain-containing-protein	unknown	unknown	gnl|CDD|225457
NC_009523.1|WP_083763287.1|2502954_2503212_+|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350320
NC_009523.1|WP_011956735.1|2481929_2483882_-|acetate--CoA-ligase	unknown	unknown	gnl|CDD|234677
NC_009523.1|WP_011956733.1|2480464_2481202_-|ribonuclease-PH	unknown	unknown	gnl|CDD|178914
NC_009523.1|WP_011956742.1|2498415_2500002_+|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NC_009523.1|WP_011956746.1|2503127_2503970_-|phosphatidate-cytidylyltransferase	unknown	unknown	gnl|CDD|366491
NC_009523.1|WP_011956743.1|2500065_2500359_+|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl|CDD|227620
NC_009523.1|WP_011956741.1|2492924_2497433_+|hypothetical-protein	unknown	unknown	gnl|CDD|276809
NC_009523.1|WP_157041030.1|2487091_2487784_-|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl|CDD|176648
NC_009523.1|WP_011956731.1|2478660_2479914_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009523.1|WP_011956730.1|2476725_2478537_-|M3-family-oligoendopeptidase	unknown	unknown	gnl|CDD|341070
NC_009523.1|WP_157041029.1|2486286_2487162_+|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_157041030.1|2487091_2487784_-|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	3.4e-39	129.2	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956746.1|2503127_2503970_-|phosphatidate-cytidylyltransferase	gnl|CDD|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	1.27346e-48
NC_009523.1|WP_011956747.1|2503974_2504685_-|isoprenyl-transferase	gnl|CDD|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	6.19483e-127
NC_009523.1|WP_011956740.1|2489677_2491396_-|single-stranded-DNA-specific-exonuclease-RecJ	gnl|CDD|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	3.08744e-173
NC_009523.1|WP_011956744.1|2500831_2501896_+|DUF2157-domain-containing-protein	gnl|CDD|378311	pfam09925, DUF2157, Predicted membrane protein (DUF2157). This domain, found in various hypothetical prokaryotic proteins, has no known function.	0.00131504
NC_009523.1|WP_011956736.1|2483933_2485853_-|acetate--CoA-ligase	gnl|CDD|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NC_009523.1|WP_011956734.1|2481278_2481827_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.2878e-10
NC_009523.1|WP_011956748.1|2504803_2505361_-|ribosome-recycling-factor	gnl|CDD|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	5.26478e-96
NC_009523.1|WP_011956739.1|2487794_2489666_-|cyclic-nucleotide-binding/CBS-domain-containing-protein	gnl|CDD|225457	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms].	1.01446e-170
NC_009523.1|WP_083763287.1|2502954_2503212_+|PIN-domain-containing-protein	gnl|CDD|350320	cd18753, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.8358e-17
NC_009523.1|WP_011956735.1|2481929_2483882_-|acetate--CoA-ligase	gnl|CDD|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NC_009523.1|WP_011956733.1|2480464_2481202_-|ribonuclease-PH	gnl|CDD|178914	PRK00173, rph, ribonuclease PH; Reviewed.	3.90952e-131
NC_009523.1|WP_011956742.1|2498415_2500002_+|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	3.99107e-08
NC_009523.1|WP_011956743.1|2500065_2500359_+|ribbon-helix-helix-protein,-CopG-family	gnl|CDD|227620	COG5304, COG5304, Uncharacterized protein conserved in bacteria [Function unknown].	3.16326e-08
NC_009523.1|WP_011956741.1|2492924_2497433_+|hypothetical-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.63942e-06
NC_009523.1|WP_157041030.1|2487091_2487784_-|3'-5'-exonuclease	gnl|CDD|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	4.58907e-44
NC_009523.1|WP_011956731.1|2478660_2479914_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.65308e-15
NC_009523.1|WP_011956730.1|2476725_2478537_-|M3-family-oligoendopeptidase	gnl|CDD|341070	cd09607, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B Oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and is similar to oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid.	0

Protein sequences

>NC_009523.1|WP_011956740.1|2489677_2491396_-|single-stranded-DNA-specific-exonuclease-RecJ
MSTSRLSARNKRWHILETPPEFIAACRALPPLIAALLYQRGVRSDAAMREFFSADYRLNDPFSMRGMETAVQRIAAAIHDHELMAVYGDYDTDGVTAVTLLVQAISAMGGLILPYVPHRIREGYGLNIEAIDALAREGVRLLITVDCGISNVREAAHARAVGIDLIITDHHHPPARLPDAVAIINPRQPGCSYPFKHLVGVGIAFQLVRALARRGFRSTLQKDDLLDVVALGTVTDMGPLIGENRVLVTHGLKALNAAQRPGVRALIQAAGMTPGRVTSTDISFGLGPRLNASGRIDNARLSYELLLAEEFETAQRLAHELNLQNRQRQELSKTVHEQASAQIQALGKQNQRLIILDGTDYPAGVVGLVAARLVEEYGRPTVLIERGEQWSRGSARSVPGFSIIDALTDCADLFERFGGHTEAAGFTIATDRLPALEDRLLRYAAEHLSDDLLMPGITIDAEVPPASLSYELLGELAKLEPFGHGNPQPVLMSRRLQVTGAWPRGSEGQHLKLRLVGADGSGPFDAIAFRFGHLARYFEQPRWIDIVYTLEADEWNGSPSLQLNVKDFRSAR
>NC_009523.1|WP_011956739.1|2487794_2489666_-|cyclic-nucleotide-binding/CBS-domain-containing-protein
MEEIVRFLLEHPPFSQLPLLQIQRIAGAIQIEYFGQGVQILVQGGKPAAFLYIIRRGSVDLLRERDGVVELTDTMSEGECFGYVSLIQGKPPISTVRAREATLCYLLPAALFHQLRRDYPSFAQFFARSITERLEQALQQRHATAAPELFQTRLQDLITEPLVVVPPNTTILEAARRMRDAQASALIVDLPPYGMLDAGSGIVTDSDLRNRVVAEGLDYTTPIAHVMSAPAITVPADSLVFEGLLKMIEHGVRHLALSRDGQIIGIVNYRDFLRLQSNNPLLMPQRLALAHSEADLRAYTEQVTATVGGLLDAGARVSDIGRAVAAAHDALLVHIIRDAEAALGPPPCPYAWLVLGSEGRYEQTLRTDQDNALIYADNAPEEAEAYFTALAERVVEQLVRCGFPRCPGNVMATNPQWRQPRAVWQNYFRQWISVPDEEALFRTAIFFDLRSVYGTLDIEASLRPIILRARDNRVFLGRLARAALRQTAPINFFRQLVLERRGDQRGLIDLKYRGTAMIVDLARLFALEAGVPDTNTIARLRKAANHSSLGETSAEELIAAFELIGLLRLRWQYQQLRQGLEPGNQVEVDKLTPLERRELKEALRAVAVVQRAVAATYQTNMIA
>NC_009523.1|WP_157041030.1|2487091_2487784_-|3'-5'-exonuclease
MFLFRRRPINLPEAVRAYLDAPRPDPDLPWRDVPYSVIDVETTGLNPRRDALLAIGLVDIDDGRIRMDQRWYTLVRPPDDAPVNPEAIRVHGLLPQDVEQAPPPGDVLPVLLRRLTGRVLVVHVADIDIGFLRQALRRLYQVDPRGPAIDTARLAWHFQRNQRLIDGADQEPALQLRALAESAGLPVYAEHNALNDALTTAQVFLAQINAMQPNGTPRLRDLLRAGGCLR
>NC_009523.1|WP_157041029.1|2486286_2487162_+|hypothetical-protein
MPEQRRAGVASLQSGAAAVVALIKLHRVSCPSGRGMPRPNSAAPEQRRARTAPRPNSAAPEQRRAGAASLQFGAAAVVALMKLHRVSCPSGRGMPRPNSAAPEQRRARTAPRWRGVAAIRRCRSCRSDEASSRLMPVGARHAAPEQRRARTAPRPNSVAPQLCCLGVASLQFGAAAVVALMKLHRVSCPSGRGMPRPNSAAPEQRRARTAPRPNSVAPEQRRARTAPRWRGVAAIRRGSDHDGIVIPQPGAPARLRVGIKARRNAENCVTAGIPPRAADRAGAACRSVAWR
>NC_009523.1|WP_011956736.1|2483933_2485853_-|acetate--CoA-ligase
MTLTHAIGSTNSVETADVVVNPPEEAARIANLTDYEAVYRRSIEDPQGFWAEAAQALHWFEPFHTVLDDSKAPFYKWFVGGKTNMAYNALDRHVQTWRKNKVALIWESEDGEVRTYTYWQLYRDVNKFANVLKSLGVRKGDRVAIYTGRCPEQAIAMLACARIGAVHTVVYGGLSTEALRSRIDDAHAKVLVVADGSLLNGKIVKLKEIADQAVEHAPSIETCVVIRRTGHPVDIRSGRDYWWHELMALPIASARCESEVLDAEDPFFIIYTSGSTGKPKGVVHTLGGYMVDVYTTLKYVLDFKEEDTLFCTSDAGWIVGHSIVLYGPLMHGITTLMYEGAPAYPYPDRWWHLIERHGVTLMFTAPTGVRGLMRYGDAWPKRRDLSTLRLLACAGEPLNPEAWRWFYEVIGQRRCPVIDNWWQTETSRPMLSNFACLPMKPGSCGFPAPGVAIDVVDEQGQSVPPGVEGSLVITRPWPAMLRTIYGDDQRYIEQYWSRYPGMYLTGDAAKRDADGYIWIIGRTDDVIKVSGYRLGTAEVESALVSHPAVAEAAVIGLPHPVRGNAIHAFVLLRAGHSPSEELANELKAHVGKVMGPIAKPETISFPPTLPKTRSGKIMRRVLRAQALGEPLGDLSTMEG
>NC_009523.1|WP_011956735.1|2481929_2483882_-|acetate--CoA-ligase
MSIDVASPKTITQFEDEQGIYHPAPHIVENANITAYMRSKGFSTWEELYQWSIEYPELFWTDMANRLEWYQPWEKVLDDSNKPFYKWFVGGKINIVHNAIDRHLRTARRNKQALIWEGEDGSYRAFSYFGINREVSKFANVLKSMGVQQGDIVSIYMPRVPELVFAMLACAKIGAAHSVIYGGFSVEALRERIADAQSKVLITADGGYMRGKIVELKKIADEAMSHSPSIQTCIVLRRTGHEVEMQAGRDYWWHDLMNLPIASPKCETVPVDAEHPLYILYTSGSTGKPKGVMHVHGGYAVHVSATLHFTFDIKEEDRYWCAADPGWVTGHSYIVYGPLIEGATSFMYEGAPNYPYPNRWWSLVEKYGINILYTAPTAIRGLMRFGDAWPNRHDLSSLRLLGSVGEPINPEAWRWFYQVIGKERCPIMDTWWQTETGGFLITPNPTTPLKPGSATRPFPGIQADVVDEQGRSKAPNEDGLLVIKSPWPGMMRTILRDPDRYVNQYWNSDPPGMYTAGDSARKDEDGYFWIIGRIDDVIKVSGYRLGTAEIESALVSHPAVSEAAAIGLPHEVKGTAIHCFVILRAGIEGTPALEDELKAHVAREMGPIARPESIKFVSILPKTRSGKIMRRVLKAQALGQDPGDLSTLEG
>NC_009523.1|WP_011956734.1|2481278_2481827_+|GNAT-family-N-acetyltransferase
MTTAPPRVPFSATLRDGRTVTIRLLEAGDNERLIALGAALPQNDWLHAENDLRSPDMVARLVNARDAEHWRQIVAVAPDGAIVAYASARLLPSRSSHVADIQLIVGEAWRRCGLGTVMAGEIVAHARKLGAAKVFVDMVEEQTAGQAIFTRLGFKLEGRLVNHIRDRQGNLHNLVVLAYHVE
>NC_009523.1|WP_011956733.1|2480464_2481202_-|ribonuclease-PH
MVRNDGRAPADLRPVRITIDTYGYAEGSALIEMGNTRVLCTASVEEGVPQWLRGQQRGWVTGEYALLPRSTAQRTRRERNGVSGRTQEIQRLIGRALRAAVSLEALDGFTVTVDCDVLQADGGTRTASITGGYVALALALHRLTAEGRLASNPLQRAVAAVSAGYVAGCALLDLDYSEDSVADMDCNLVLTDDGAIVEVQSTAEARAVSRAEFDALIDLATDGIRRLLAIQRAALAPVAGGSVEG
>NC_009523.1|WP_011956731.1|2478660_2479914_-|tetratricopeptide-repeat-protein
MLSEPQHDEAIVHFQRGLVLEQANRVEEAVEEYRRALEHNPHLAEAHDALGNYYHRHGLLAKAAEEFRIVANLEGGFLAHFNIGCVLIELGRYDEAIDALLQCLTLDADDPAVHYQLGLAHFLKGDDYAALYHLQITRQRYPNDSSIHTLIGRCHLRLGAYDDAEMALHTALRYALRDIDRLRIMMYVQAVARYREIGVVHSIRERFYADHGAAYLGSTHDDGRSSHEFADFHFTYPDIAVTLYRLTRLARWQHWRLSCVVPLDRLTEPLARALAMLLEIPVRRPEDLRADDVALLVLAVGHQAELLKLALERAPCPAVTFCLGLNWLRHSAVVPDLIGVAARDTCSIPWEPEFRRLRAHGAPADQLDHCLNQAFHHLVAVMQTLSPEAINVQNLTFFQTFRHLRFLERASGASAVP
>NC_009523.1|WP_011956730.1|2476725_2478537_-|M3-family-oligoendopeptidase
MTLSVSEPLPHWDMTVVYPALDSPEFNHDLTATRQAFDTMTSLFDRLGINRRDRQSTDDAAVAAFETVVPALNELLEQFSTQRAYVYSFVATDSRNDQAQATFSMLMREGVRLTKLLRRLTAWLGGLDVETLIQRSTIARDHAYLVRRAAEEARHLMSPAEEELAAELDLSGGIAWARMYQNLTSQILVPIEREGQTVELPMSQVRNLARDPDRAVRRSAHEAELAAWERAALPLASALNSIKGQVLTLSRRRRWESPLEASLFDNGIDRATLDAMMTTAREFFPDFRRYLRAKARLLGLERLAWYDLFAPVGSGGRSWRFSDAEAFIVAQFTRYSTRMGDFAARAFRERWIDAEPRAGKVGGAFCMSLRRDESRILLNHDPTADSMFTLAHELGHGYHNLNLAQQTMLNRDTPMTLAETASIFCETIVRNAALQDASRDETLEILEAFLSGACQVVVDITSRFLFETALFEQRATRDLSVAELCVLMIDAQKQTYGDALDEQTLHPFMWAVKGHYYSSGFSFYNYPYMFGLLFGLGLYAAYQRAPDAFQARYDDLLASTGLASPLELAARMEIDLRSPAFWRASLEVIRYDIDRFESLAVAT
>NC_009523.1|WP_157041031.1|2492448_2492661_+|hypothetical-protein
MGLKPSARQGKARLRGLDKDYKPSLSAGKPRRGYGVESWVRGRPRPHARRRRAHLEQTLLICAPEVRAPI
>NC_009523.1|WP_011956741.1|2492924_2497433_+|hypothetical-protein
MTSPTFPELPAGLRARLDAAGVTDAATLAAALDADPALRREYQAFLLDALPAIPDEEQLRALWQMIPSKDEDAFLAAAEARAAAAETSGDAGLAAALRERIDALRSFQQDIARDGEILRQALERLEAAATDDDLAAVWRDVPLELEETFLNLVALQAEEHEQHGDAERAAHVRACHERFSAIQQQQRAGAETMRRLLEQLAADVEALAAAADHQGVADVWNRIPLELEEPFLQLTEHLAGELEQTDAATAARLREWIAALSQARVQRETARDMVRQALERLEAASSSDDAWQVWLDLPGDLEEWFLQAITERIEEVERDDTGLAERLRAAHARMRAERNRRQERANHPVVQALRAFLDAATDADATRVFNEHKAILQPFEAQRELDDLAQQAPDEQRAAIAARAALLRRLRGGDPAPRPTPAAATPAETRTVTPGSIVYINSAVVEGGSGTAIVYNNIVMERRWNRPYPERLSIDAIARTRDLEQVARIITERGQLAITGGTRTATAAVQGMPGIGKTILARQLALALNDRYPGGVIWEEIGPEVRAPEDTQPILNRWARYALTVPPNLDNQLAFDASAVRALFAAQGQPLLVILDNVWSLEAIRWLRAALPENAHLVITTRLETVMIGLGGGEYVLGLLTPDEARALIALRLNWTELPADHYDWADALAVGVGYHTLALDVAIRRLRLDARSPGAPRWREQVNRLLDHIRSGQGFERLALPDSERNQNVEAVLAYSYDRMDDTARARFRMLGAFAPEATFGSAAVAALWQCDVEPADEMLSAFAGAALLEAGGDDDRWRQHSLLRGYALALLRREGEHEAAAARHAAFYAAAMRTADDAQRFYDVLGDYAQLRHAFAWAIENDLELALDLVANTANLQKAHGYGRDNLAWAEQALAAAQQRGTPAQIARARVSLGNALQHVATLAEEDRAARLRQALSAYDEALRFYTPTSAPLDYAMTQNNRGNVLQDLATLAEEDRAARLRQALSAYDEALRFRTPTSAPLAYATTQNNRGAVLQDLATLAEEDRAARLRQALSAYDEALRFYTPTSAPLDYAMTQNNRGAVLRDLATLAEEDRAARLRQALSAYDEALRFRTPTSAPLAYATTQNNRGAVLQDLATLAEEDRAARLRQALSAYDEALRFRTPTSAPLDYAMTQGNLLNLYQTLAGEPGEDRLARLLDALRAGWTAFGFFTALQHSDFQQHAMRQLRGLRAACGDDFDTLWAALDTGPPPGWLIAPEEGETPSLPPDLQARLAAAGVTVEDSFLAALAADPELRAAVEAAMAQQHQALLDQLVQRLLAVSSGEELLAFWRELPAELDEPLAAAAEEAARRARQAGDAALAQALRERAAGLRAIRAAADAAQSKIQQAWQHYIELVEAAEASGNDIAAWRAAVEAGEALLAPEFTDTLGIGDAVREHVASTWNALGNALHDAGDGEAAVAAYDRAIALQPDKAMLRRNRVATLIDLGRRAEAAEELARARALEPDAARLAELEARLRDEG
>NC_009523.1|WP_011956742.1|2498415_2500002_+|CHAT-domain-containing-protein
MPEMPRSHDLKVEPRALARFIPRTVPPALRLPPEINRLDLLHQEGVEALLRELYNLLRDQGITCDVEPPAPAMAVRQPIRTIDTTLTEKRGTCLDLSLLFCAVCLAHDLAPLLIVLEGHAFVAVTTGRTLQQPHGEGMPAFERGMLASFDALRDQVPRLYLPVECTGFAAGAGLSREYPEGRGRERRDGCMSFDRAVRAGEEYLNAHIAPAGATPGAAQRAFLYALDIVTLQDRYGFMPVGDTLPGDTRVYLDSAHAEGGAASVRNQGAGEAAPSALPDADRLYQRSAHAEGGGDARVENQGGSVAPPPAKARRIYSGSAHAEGGGNATVLNNAPQPVARVEPATVLAVYAAPPGSALLHWERDVRALGKALAPYPDRFRLDVVPLATPEDVQRALVQFRPRYLHLFAHGAVDGILLDDGEGGRGWKLPYPLLAEMVRATPGLRCVLLSACDSAYAASATGSGEPYLIAMRGQVSVDAAIAFAGGFYEALAAREDTPIEAAFAQGLIRLKLIAPLDAEVPLLAAGWRG
>NC_009523.1|WP_011956743.1|2500065_2500359_+|ribbon-helix-helix-protein,-CopG-family
MNHEAKLEPEEQELVDSYERDEWRSVPTFQENLRQYQSYAVATFEAIGLISITLPQEDLNAIREKAAARGMSYQALIATIVHQYVTGDLVEKKPHSV
>NC_009523.1|WP_011956744.1|2500831_2501896_+|DUF2157-domain-containing-protein
MPTTPVHFTLADLEQWVEKGLITPEQLTNIRSHIEAAGPVAEQAKAGPEQRKGLNFVSLAYYFGGFMILLAYTIFMGLQWESLEFTGQIAISLFTIVVLWAIGYVLQRSGFRIAGGLLIFAGTGIVPLFVFTVQRALGIWPDDQTYAYMEFYRIVAQTWILLELISIGVAVIVIWRVRFTLISLLIAFWTWFLSMDITRWVSRSDYWTWSDREQIVSTTIGVGMLGLGVWLQRRTKQDYSFWFYLFGHIIVLSHLSALTLNREGFLGIVYLAVYISFVVASVWLQRRVFLVFGAIGCYSYLSYLAFQVFQGALGFVFALGVIGLLIVLTAVGYQKYLRSWLENQLARYRVAAER
>NC_009523.1|WP_011956745.1|2502737_2502965_+|hypothetical-protein
MSARIIEKVIEQLQSLPYDLQRQVLAFTRALALAAPRGVAGRELLQFAGAIPRSDVELMQKAIEQGCEQVDTDEW
>NC_009523.1|WP_083763287.1|2502954_2503212_+|PIN-domain-containing-protein
MSGRYLLDTSILIALFANETAVKEKLAQASEVFIPSIAIGELYYGAWKSQITSHSHHPHPASSSASIYTVGAVNSRLSIRSRTPP
>NC_009523.1|WP_011956746.1|2503127_2503970_-|phosphatidate-cytidylyltransferase
MIQRVLSAVVLLPLVVVCVWWSFWSFTLLLVAAAALGLSELYAAFSRGGYQAQTAPGMGAAAILIGVSIIRALTALDLTAPALALIVMVSLAMFAPRHAQHGVVAEWALTISGAIYIGGLLGFLVLMRALETPLRDGLLAPLQPQPGAAWIALVLMTTWGQDVFAYFVGKRWGRRRMAPSLSPRKTWEGAAGGMVGALAGAFVALALFGLPLSLWATTLIGIAAGIVGPIGDLSESFIKRQAGLKDAGTLIPGHGGVLDRIDSLLFTAPTVYMLALLLAG
>NC_009523.1|WP_011956747.1|2503974_2504685_-|isoprenyl-transferase
MSQRARVPRHIAIIMDGNGRWARQRHLPRLAGHRAGTENIRRIVTECAEQGVQYLTLYAFSTENWSRPSAEVDGLMRILSDFIDRETINLHREGARLRHLGRLENISAELRQKILDAIELTRHNTRITLAVAFNYGGRADIVDAVRELIALGVKPEDVTEAVISDHLSTRGMPDPDLIIRTSGEWRLSNFLIWQAAYSEYWTTPVYWPDFSPEHLRQAIYDYGQRERRFGGLSEES
>NC_009523.1|WP_011956748.1|2504803_2505361_-|ribosome-recycling-factor
MVNDVLREAESRMKKATEALRNHLATIRTGRASPALVEHLHVEAYGATLPLNQLATITVPEPRLLVIQPFDANTVKAISKAIMNSELGITPTDDGRVIRLAIPQLTEARRKELTKLVRARVEESKIALRNIRREALEDLRDLEHEKMISEDEHRRAQEKLQELTDRFVRELDHIGATKEAEVMEI

Crispr_ID: NC_009523_51

• CRISPR_ID: NC_009523_51
• CRISPR_location: 2598414-2598517
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_51

Consensus_repeat	Method
GAAGCGCAACTGGCGCAGGCGCGGGC	CRISPRCasFinder

spacers of NC_009523_51

>51.1|2598440|52|NC_009523|CRISPRCasFinder
GCGGCTTGATCTGGCGCGCAATGGCGCGCGTCCAGAGCAGATCCAGGCGGCG

CRISPR arrays and Neighbor proteins around NC_009523_51

CRISPR arrays

The CRISPR arrays of NC_009523_51

>merge|NC_009523|51|2598414-2598517|CRISPRCasFinder
GAAGCGCAACTGGCGCAGGCGCGGGCGCGGCTTGATCTGGCGCGCAATGGCGCGCGTCCAGAGCAGATCCAGGCGGCGGAAGCGCAACTGGCGCAGGCGCGGGC

>NC_009523|51|48|2598414-2598517|CRISPRCasFinder
GAAGCGCAACTGGCGCAGGCGCGGGC	GCGGCTTGATCTGGCGCGCAATGGCGCGCGTCCAGAGCAGATCCAGGCGGCG
GAAGCGCAACTGGCGCAGGCGCGGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956827.1|2592693_2593041_-|Na+/H+-antiporter-subunit-C	unknown	unknown	gnl|CDD|183659
NC_009523.1|WP_041335177.1|2589985_2590393_-|monovalent-cation/H(+)-antiporter-subunit-G	unknown	unknown	gnl|CDD|237169
NC_009523.1|WP_011956837.1|2604125_2605196_+|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl|CDD|274250
NC_009523.1|WP_011956829.1|2593473_2595855_-|putative-monovalent-cation/H+-antiporter-subunit-A	unknown	unknown	gnl|CDD|237156
NC_009523.1|WP_011956838.1|2605351_2605801_+|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl|CDD|223393
NC_009523.1|WP_157041039.1|2596623_2597253_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|379522
NC_009523.1|WP_011956825.1|2590664_2591135_-|Na+/H+-antiporter-subunit-E	unknown	unknown	gnl|CDD|237159
NC_009523.1|WP_011956833.1|2599808_2600744_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009523.1|WP_011956828.1|2593045_2593462_-|Na+/H+-antiporter-subunit-B	unknown	unknown	gnl|CDD|237122
NC_009523.1|WP_011956836.1|2603006_2604110_+|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl|CDD|378455
NC_009523.1|WP_041333498.1|2589572_2589953_+|diguanylate-cyclase	unknown	unknown	gnl|CDD|236577
NC_009523.1|WP_157041288.1|2599041_2599812_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|131480
NC_009523.1|WP_011956841.1|2606630_2607461_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|234689
NC_009523.1|WP_011956835.1|2601728_2602706_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009523.1|WP_011956834.1|2600740_2601616_+|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NC_009523.1|WP_011956826.1|2591147_2592644_-|Na+/H+-antiporter-subunit-D	unknown	unknown	gnl|CDD|237163
NC_009523.1|WP_011956822.1|2587724_2589287_+|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl|CDD|341259
NC_009523.1|WP_011956824.1|2590401_2590665_-|cation:proton-antiporter	unknown	unknown	gnl|CDD|237148
NC_009523.1|WP_011956839.1|2605880_2606225_+|sulfurtransferase	unknown	unknown	gnl|CDD|238786
NC_009523.1|WP_157041040.1|2606185_2606638_+|DUF309-domain-containing-protein	unknown	unknown	gnl|CDD|377120

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956827.1|2592693_2593041_-|Na+/H+-antiporter-subunit-C	gnl|CDD|183659	PRK12659, PRK12659, Na+/H+ antiporter subunit C.	8.52373e-66
NC_009523.1|WP_041335177.1|2589985_2590393_-|monovalent-cation/H(+)-antiporter-subunit-G	gnl|CDD|237169	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed.	2.54256e-28
NC_009523.1|WP_011956837.1|2604125_2605196_+|GTP-3',8-cyclase-MoaA	gnl|CDD|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.15711e-158
NC_009523.1|WP_011956829.1|2593473_2595855_-|putative-monovalent-cation/H+-antiporter-subunit-A	gnl|CDD|237156	PRK12647, PRK12647, putative monovalent cation/H+ antiporter subunit A; Reviewed.	0
NC_009523.1|WP_011956838.1|2605351_2605801_+|iron-sulfur-cluster-assembly-accessory-protein	gnl|CDD|223393	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones].	1.6395e-40
NC_009523.1|WP_157041039.1|2596623_2597253_+|TetR-family-transcriptional-regulator	gnl|CDD|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	5.4473e-15
NC_009523.1|WP_011956825.1|2590664_2591135_-|Na+/H+-antiporter-subunit-E	gnl|CDD|237159	PRK12651, PRK12651, Na+/H+ antiporter subunit E.	1.29037e-74
NC_009523.1|WP_011956833.1|2599808_2600744_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.80225e-95
NC_009523.1|WP_011956828.1|2593045_2593462_-|Na+/H+-antiporter-subunit-B	gnl|CDD|237122	PRK12509, PRK12509, Na+/H+ antiporter subunit B.	3.34998e-66
NC_009523.1|WP_011956836.1|2603006_2604110_+|Mrp/NBP35-family-ATP-binding-protein	gnl|CDD|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	5.00161e-141
NC_009523.1|WP_041333498.1|2589572_2589953_+|diguanylate-cyclase	gnl|CDD|236577	PRK09581, pleD, response regulator PleD; Reviewed.	1.07453e-14
NC_009523.1|WP_157041288.1|2599041_2599812_+|alpha/beta-fold-hydrolase	gnl|CDD|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	2.1467e-28
NC_009523.1|WP_011956841.1|2606630_2607461_+|methyltransferase-domain-containing-protein	gnl|CDD|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	6.55338e-22
NC_009523.1|WP_011956835.1|2601728_2602706_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	4.51445e-100
NC_009523.1|WP_011956834.1|2600740_2601616_+|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	2.43531e-25
NC_009523.1|WP_011956826.1|2591147_2592644_-|Na+/H+-antiporter-subunit-D	gnl|CDD|237163	PRK12663, PRK12663, Na+/H+ antiporter subunit D.	0
NC_009523.1|WP_011956822.1|2587724_2589287_+|long-chain-fatty-acid--CoA-ligase	gnl|CDD|341259	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD. This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.	0
NC_009523.1|WP_011956824.1|2590401_2590665_-|cation:proton-antiporter	gnl|CDD|237148	PRK12599, PRK12599, putative monovalent cation/H+ antiporter subunit F; Reviewed.	1.18406e-18
NC_009523.1|WP_011956839.1|2605880_2606225_+|sulfurtransferase	gnl|CDD|238786	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.	6.20844e-26
NC_009523.1|WP_157041040.1|2606185_2606638_+|DUF309-domain-containing-protein	gnl|CDD|377120	pfam03745, DUF309, Domain of unknown function (DUF309). This domain is found in eubacterial and archaebacterial proteins of unknown function. The proteins contain a motif HXXXEXX(W/Y) where X can be any amino acid. This motif is likely to be functionally important and may be involved in metal binding.	2.1501e-22

Protein sequences

>NC_009523.1|WP_157041039.1|2596623_2597253_+|TetR-family-transcriptional-regulator
MTVKDDSDTRDRRRRILDAALQVFGAKGFQKATNRDIAEAAGGISPGLIYHYFKDKQDLFLCMLRERAAIMALVDHPQQLMDLPLRQGLALIGRSYLTMMRVPENVALFRIVLAETLHFPEVATMIRQHFVDRVFGVVRAYLQHQIDLGRLRPHDTGVSVRTFLGGILIHVIAREVLRQPEALQISDDQIVALAVEIFLHGLSLEAEEM
>NC_009523.1|WP_011956829.1|2593473_2595855_-|putative-monovalent-cation/H+-antiporter-subunit-A
MLTAVLSGFGGAIAAPWLHRFAPRHAGWLAALLPFALMIYFISLVPAVAGGDALRFSYAWVPGLGVNLSFRIDGLSLLFALLITGIGTLVLIYAGGYLANDPMLGRMLTLLLIFMAAMLGIVTSDNLIALFVFWELTTISSYMLIGYKHEYEKARKAALQSLLVTGIGGLALLAGIVLLGQIAGTLELSEMLKQGDVVRAHPLYGGILALVLFGAFTKSAQFPFHFWLPGAMEAPTPVSSYLHSATMVKAGVFLLARLNPVLGGTEAWQLLLTFFGGATMIVGSFLAVQQTDLKRILAYTTVSALGTLVLLIGVGTDDAIKAAMVFTLGHALYKGALFQVAGSVDHETGARDISQLGGLRTAMPITAAAAMLAALSMAGLPPMLGFIAKEVQYKANLSEPILIGVALLTNILTVVAAGFVSLRVFTGQPVHTPKHAHEAPLSMWLGPVALALGGLGAGLFSTQIGNFLIGPATGSVLGKVKAVELVLWAGIEGAAGQALALSGVTLLAGIGLYYARSIFPRIAAATAPLAALGAESWYHRSVNGMLLLAERQTRVLQNGYLRFYIGLIITTTLILTGLMLLVGRVTITIPQNWTDVRVYELVVALIILSATTFVLRATSRMAAVVGLGFVGYGTALTFLLFGGPDLAITQFAVETLSAILFVLVVYRLPRFGNLSSVGARVRSAALAIAGGALMTMLTLIALAEPTESRLSSFMAENSQPLANGRNVVNVILVDFRGFDTMGEITVLGVAAIGIYALLKLVLAPERDRRAETDGSRDGKTEGVPRERAEVIDA
>NC_009523.1|WP_011956828.1|2593045_2593462_-|Na+/H+-antiporter-subunit-B
MYSLILATATRLLIPLMLIFSIFLLIRGHNEPGGGFVGGLVAGAAFTLYAAAYGVSQAQSALRFDPKQLVGFGLLVAVVSGLLAFIQGLPFMTGLWYKEPLPVIGKVGTPLLFDVGVYLVVLGIAATIVFTLFEVEGE
>NC_009523.1|WP_011956827.1|2592693_2593041_-|Na+/H+-antiporter-subunit-C
MEFIWAIVIGALYAAGLYMIMRRSIFKIVLGLALLGYAANLLIFIVSNLTRGNPPLVPPGATAPIAPYADPLPQALILTAIVIGFGVQAFTIVLFRRAYRSCGADDIDELRTTEH
>NC_009523.1|WP_011956826.1|2591147_2592644_-|Na+/H+-antiporter-subunit-D
MNILIVSPVLIPFITGIVMLLFWSRRDIHRFLNVVGAALLLAASLALLDSVARHGVQATQLGNWPAPFGISFVADLFSAIMVVITGLTALAVAVYSLGSMDEARERFGYYPLLHIMFMGICGAFLTGDIFNLYVWFEVLLMSSFVLMALGGERAQLEGSIKYVTLNLLSSALFLSAVGILYGAVGTLNMADLSLQLSLLNHQGIVLTLAMLFLVAFGIKAAIFPLFAWLPASYHTPPIAVSAIFAGLLTKVGVYALIRVFSLLFVQDIALTHGLILILAGLTMVTGVLGAVAQNEFRRVLSFHIISQIGYMIMGLGLFTPLALAGAVFYIMHHIIVKMNLFLVSGIVHRLRGSYELKDLGDVYKTHPWLAILFLIPAFSLAGFPPLSGFWAKLILVQAGLQVEQYIIVAVSLLVSLLTIFSMMKIWAEAFWKKAPIQTQPNTRNLGFMVAPAVGLALVTVTIGLATQPFYELALGAANQLADPSAYIAAVQSASLALR
>NC_009523.1|WP_011956825.1|2590664_2591135_-|Na+/H+-antiporter-subunit-E
MFLLNILLAIAWSALTGQFSPGDLAFGFVLGYAILWSLRRQLWGERYFTKVPQVIYFVAYVAWQIILANLNVARTVLFTPKEQIRPGIVAIPLDIRTDAEITMLANLITLTPGTLSLDVADDRSCLYVHTIDVGDPEQFRREIKDGFERLVYEVFN
>NC_009523.1|WP_011956824.1|2590401_2590665_-|cation:proton-antiporter
MLQTIALWVALPLLSIAVALPVIRLVRGPTLPDRVVALDVMGTVAIAMFATYALINAQPAFLDAALVVGLIGFIGTIAFAYYAERRL
>NC_009523.1|WP_041335177.1|2589985_2590393_-|monovalent-cation/H(+)-antiporter-subunit-G
MQEIISIILMLIGVLLLMVAGIGVVRMPDIFLRMSAASKASSLGAGCVLLSVAVSAADIAVTVRALAGLLFLLLTAPVAAHMIGRAAYMIGAPLWKGTMVDELRGHYDTRRHTLSGIGAQPSQPRRGTGPLGDKS
>NC_009523.1|WP_041333498.1|2589572_2589953_+|diguanylate-cyclase
MDITDRRRAEEALQQRIFEVAHFHEQIRELGIRDGLTGLFKGRYLEGQLACLFADHDSHSTLAVAMLDIDHLKEINDKYSRQIGDVALQTFADSYKNYQQVIRAADDLMSAAKRRGRNRVMIERSG
>NC_009523.1|WP_011956822.1|2587724_2589287_+|long-chain-fatty-acid--CoA-ligase
MDTSLYTLLERQAAACGSRVYLYWRDEEVSYAAFARQVRRVAHGLRALGVDRGDKVALLLGNCPEFLSVFFACAALGAVAVPINPRLKAGEVQYILQNSDSVALVIASDLLSMIAPTLGDCPLLRHVVIVGAIPDMPVSVPLHPFSSLSASDDRPIVASVSPDDIASIIYTSGTTGRPKGVLLSHGNYLFDVWSYATACQISAADRLLCMLPLFHVNAQVASVLSALHQGGALILLEGFSPREFLPALARYRATSFSAVPTIYAILNNLPDASQYDLSNLRVCICGAAPMPVEVFERFEQTYRAFILEGYGLSEGTCVSTLNPLDGRPRKIGSIGVALPGQEVRIVDEHGVSAPAGTVGEIVIRGPNVMQGYYKNPEATAAAIRDGWLYTGDLGFCDAEGYFYIVGRKKEMIIRGGENIYPKEIEEVLYRHPAVVEAAVVGLPDPIWGEQVAAFIVPRPDKAVSTEEIADYCRANLADFKCPRVIEFIDAFPKTATGKIQKNQLVEQYRQQSGYDDTDRS
>NC_009523.1|WP_157041288.1|2599041_2599812_+|alpha/beta-fold-hydrolase
MVQRRDCAIAGPEGAPVFVLIHGARLTRAMWQPQIEALSDTFRVIAPDLPGHGALAGVPFSLDAAVEQVAAVVDAIVGERVIVCGLSLGGYVALAFGARYPSRATALILSGCAFAFNGFAGRLLRAPYLAIARLLTANFAPLLARAEERTFRKRYPPALADAIVARGFFYRFYPEISAALIDFDPLPALRACECPVLLLNGAADRFFRRDERLYLRTLRAGRVRLIEGAAHLANLDQPEAYTQALRDFATEMATVR
>NC_009523.1|WP_011956833.1|2599808_2600744_+|ABC-transporter-ATP-binding-protein
MNQTYAIEAIDLSRAFGPVRAVDRLNLTVTAGRIHGLLGPDGAGKTTTLRLICGALRPDHGRAIVAGIDVTRDPEGVKQRIGYMPQRFSLYGDLTVLENLRFYADVYGVPQAERPALLKRLLGFSRLAPFQNRRTDALSGGMRQKLALACALIHRPQVLLLDEPTTGVDPVSRREFWDILREAVYADGMTVLLTTPYMDEAERCHEVSFMRAGALLAHGAPHELQRLVPGVVLEVRADPRHAAEAVLRILPGIRDVHIFGDRLHVIAETSFDAAALRQALGDAGVALHTVHPVMPGMEDVFLHLQRERKSQ
>NC_009523.1|WP_011956834.1|2600740_2601616_+|universal-stress-protein
MIHRILVPLDGSVTAEAILPYATSLARATDASLLLLRIVTPGEVSQSLFWKTTIPAELRREWTEEALTRANVYLASVAERLRARGLHVVFDVQPADDAATAIVARAEHEPEVRLIAMTTHGYGGALRWAFGSVAAKVLHAAPTPLLVVRSNGGEHPSVTEVPYRTICVPLDGSPLAEQALATAQPIAARIGATLLLVCVVTGDDIAEARKYLEGVAERLRANRFDVQTRVVEGIPADQIIYVAQTEHADLIVMATHGRTGLRQIWLGSVATKVVHSAELPVLLVRAYQEEG
>NC_009523.1|WP_011956835.1|2601728_2602706_+|ABC-transporter-ATP-binding-protein
MAIKTTDSCAVITDRLTRRFGSFIAVNEVSFQVSHGEVFGFLGPNGSGKTTTIRMLCGLLTPSSGSGRVLGLDIARDQEAIRQRIGYMSQKFSLYGDLTARENLTFYAEVYGLPRNVRAARIDELLDLSGLRGHDRTLTSELPGGWRQRLALACAIVHRPQVLFLDEPTSGVDPEARRAFWKQIYDLAGEGVTVFVTTHFMDEAEHCHRIGLMYGGSLVALDAPMALKQTAINGAVLEVEGTPQELAHTVALAHPGVRDVAPHGARLHVLVDDATVRMPQLAVALESAQVRDVRIERIEPSLEDVFVAIVDRFLAKNETSSDALQ
>NC_009523.1|WP_011956836.1|2603006_2604110_+|Mrp/NBP35-family-ATP-binding-protein
MGLFSRRDDALSEQRVLQALSTVQEPELGGDLVSRRMIKNLVIDGDTVRFAVELTTPACPLKDQIQRECEEALEKIAGIPRERVSIEFTAQVRPRGGIPEHVAIPGVSHVIAVSAGKGGVGKSTVAVNLAVALAREGAQVGLLDADVYGPSVPLMMGVRSQQPEAVSGPDGEPRMLPVEAHGIKMMSIGFLIDDRQPVIWRGPMVSQLLRQFLYQVLWAPLDYLIIDMPPGTGDIALTLAQSLQNAGLTGVVTVTTPQQVATADVLKSMEMFRKVNVPLLGIIENMAYFVAPDTGKRYDIFGSGGAARLAAQLGVPLLGQIPIGLSIREGGDHGQPAVLSDLPDAYADVFCEIARKLAARISVMEYA
>NC_009523.1|WP_011956837.1|2604125_2605196_+|GTP-3',8-cyclase-MoaA
MQYEEVRRGTIPLYTADQIRQARPLYPTDAPAHDSYGRRIDYLRISLTDRCNMRCVYCMPEIGMKFMPRPELLTTGELLLVVRAAARAGFRKIRLTGGEPTLRPDIVEIVREIKRTPGITHVAMTTNALRLEKLAEPLREAGLDRVNISIDTLDPDKFRRMTRGGSFEKVWAGIEAADRAGLHPIKLNSVVVRGMNDDEVPHLAALTLRYPWEMRFIEVMPLAGVADLAQHSVVTSAELIERLESVYGPLEDLGLAPSDSARRYRIPGAPGKLGFISSVSEPFCATCNRMRLTSDGRLHLCLLRDQEVDLRAAIRGGATLDEIEQIIRHAVALKPWGHGLPEGVLPTLRGMSELGG
>NC_009523.1|WP_011956838.1|2605351_2605801_+|iron-sulfur-cluster-assembly-accessory-protein
MATIEQDVVQHHENEFPPVLEITEGASLRLQSMMKERNLEGYGLRVFVSGGGCSGLQYGMTFDNEERFGDTVWNAHGLRIMVDPISARYLMGATISYQQDNMLAGAFKIDNPNAVSSCGCGHSFRTRDQQGADDEYDGYSGGGGCCSGH
>NC_009523.1|WP_011956839.1|2605880_2606225_+|sulfurtransferase
MRSFMQRSYRDLTTDQVKAKLDRGEPFRFIDVREAEEYALARIEGAELLPLSRAAEWIGTLDPDQEYVFFCHHGLRSAYVAEYVASTLGFARVANMIGGIEEWSLRIDPSVPRY
>NC_009523.1|WP_157041040.1|2606185_2606638_+|DUF309-domain-containing-protein
MVAAYRSICAALLTGIDETGAMDHYLEGIRLFNAGEYWHAHEEWEWCWRRSSEPEATFYKGIIQAAAALEKWKRGQPRGMRLNYAKSRPKLVAVSPSMRGLDVADLIAAMDRFVAMGGPPAPTPRIVLDPPTAAALEAHIQTLQADPHHG
>NC_009523.1|WP_011956841.1|2606630_2607461_+|methyltransferase-domain-containing-protein
MDDELLPSLRCPTCAGALDLRDRRCDTGGEIISGALHCACGAVYPIRDGIADFLGPPRPPTIAQLTNELPATAWAYERLWRPFALTLLSGESFPYQRELTLVTDWVDAARGGLVIDVACSNGLYARALARAMRPFTGHVVGIDHALPMLREARQRARAAGVRVSYLRASAQALPFASNVAQGVTIGGSLNEIGDLAACLREVRRVLVDDGRFVAMTLLAAQGVVGRAVQMALAPGGIAFWSREELLTQFRTAGLRLERSEQYGIVIFTQCSRGRGD

Crispr_ID: NC_009523_52

• CRISPR_ID: NC_009523_52
• CRISPR_location: 2630273-2630419
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009523_52

Consensus_repeat	Method
GATAGCCGATAGCCGATAGCCGATAGCCGATAG	CRISPRCasFinder

spacers of NC_009523_52

>52.1|2630306|23|NC_009523|CRISPRCasFinder
TCGATAGCCGATAGCCGATAGCC
>52.2|2630362|25|NC_009523|CRISPRCasFinder
ACAATGAGCGTGACCGGTCAGGGGT

CRISPR arrays and Neighbor proteins around NC_009523_52

CRISPR arrays

The CRISPR arrays of NC_009523_52

>merge|NC_009523|52|2630273-2630419|CRISPRCasFinder
ACGAGCCGATAGCCGATGGTCGATAGCCGATGGTCGATAGCCGATAGCCGATAGCCGATAGCCGATAGCCGATGGTCGATAGTCGAGGAACAATGAGCGTGACCGGTCAGGGGTGGAAGGTGGTAGGAGATAGCCGATAGCCAATAG

>NC_009523|52|49|2630273-2630419|CRISPRCasFinder
ACGAGCCGATAGCCGATGGTCGATAGCCGATGG	TCGATAGCCGATAGCCGATAGCC
GATAGCCGATAGCCGATGGTCGATAGTCGAGGA	ACAATGAGCGTGACCGGTCAGGGGT
GGAAGGTGGTAGGAGATAGCCGATAGCCAATAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011956867.1|2634836_2635658_+|DUF4388-domain-containing-protein	unknown	unknown	gnl|CDD|373017
NC_009523.1|WP_157041045.1|2626316_2627147_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|378400
NC_009523.1|WP_011956865.1|2633261_2633705_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956870.1|2636546_2637473_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293812
NC_009523.1|WP_157041044.1|2620790_2622413_+|hypothetical-protein	unknown	unknown	gnl|CDD|274305
NC_009523.1|WP_011956864.1|2632950_2633199_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333507.1|2619213_2619615_+|VOC-family-protein	unknown	unknown	gnl|CDD|319898
NC_009523.1|WP_157041043.1|2620324_2620729_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011956863.1|2631810_2632932_+|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl|CDD|234664
NC_009523.1|WP_011956852.1|2617707_2619114_-|transcriptional-regulator	unknown	unknown	gnl|CDD|225420
NC_009523.1|WP_011956868.1|2635684_2636215_+|ATP/GTP-binding-protein	unknown	unknown	gnl|CDD|225138
NC_009523.1|WP_011956866.1|2633865_2634807_+|DUF1385-domain-containing-protein	unknown	unknown	gnl|CDD|377780
NC_009523.1|WP_011956858.1|2624146_2624626_-|phosphohistidine-phosphatase-SixA	unknown	unknown	gnl|CDD|224973
NC_009523.1|WP_157041041.1|2616344_2617142_-|GDSL-family-lipase	unknown	unknown	gnl|CDD|239946
NC_009523.1|WP_011956871.1|2638174_2639680_+|DUF512-domain-containing-protein	unknown	unknown	gnl|CDD|132322
NC_009523.1|WP_011956862.1|2630753_2631698_+|mevalonate-kinase	unknown	unknown	gnl|CDD|224493
NC_009523.1|WP_011956854.1|2619717_2620290_+|metal-binding-protein	unknown	unknown	gnl|CDD|370771
NC_009523.1|WP_157041046.1|2637947_2638139_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041042.1|2616958_2617723_+|peptidase-S16	unknown	unknown	gnl|CDD|366967
NC_009523.1|WP_011956859.1|2624716_2626255_+|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl|CDD|234614

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011956867.1|2634836_2635658_+|DUF4388-domain-containing-protein	gnl|CDD|373017	pfam14332, DUF4388, Domain of unknown function (DUF4388). This domain family is found in bacteria, and is typically between 102 and 135 amino acids in length.	3.44126e-22
NC_009523.1|WP_157041045.1|2626316_2627147_+|helix-turn-helix-domain-containing-protein	gnl|CDD|378400	pfam10114, PocR, Sensory domain found in PocR. PocR, a ligand binding domain, has a novel variant of the PAS-like Fold. Evidence suggests that it binds small hydrocarbon derivatives such as 1,3-propanediol. In (Natural history of sensor domains in bacterial signaling systems by Aravind L, LM Iyer, Anantharaman V, from 'Sensory Mechanisms in Bacteria: Molecular Aspects of Signal Recognition.' Caister Academic Press. 2010) - see (http://de.scribd.com/doc/28576661/Bacterial-Signaling-Chapter).	2.30832e-38
NC_009523.1|WP_011956870.1|2636546_2637473_+|MBL-fold-metallo-hydrolase	gnl|CDD|293812	cd07726, ST1585-like_MBL-fold, uncharacterized subgroup which includes Sulfolobus tokodaii ST1585 protein; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Sulfolobus tokodaii ST1585 protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.86214e-93
NC_009523.1|WP_157041044.1|2620790_2622413_+|hypothetical-protein	gnl|CDD|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	1.90657e-10
NC_009523.1|WP_041333507.1|2619213_2619615_+|VOC-family-protein	gnl|CDD|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	3.30929e-12
NC_009523.1|WP_157041042.1|2616958_2617723_+|peptidase-S16	gnl|CDD|366967	pfam02190, LON_substr_bdg, ATP-dependent protease La (LON) substrate-binding domain. This domain has been shown to be part of the PUA superfamily. This domain represents a general protein and polypeptide interaction domain for the ATP-dependent serine peptidase, LON, Peptidase_S16, pfam05362. ATP-dependent Lon proteases are conserved in all living organisms and catalyze rapid turnover of short-lived regulatory proteins and many damaged or denatured proteins.	1.87629e-33
NC_009523.1|WP_011956852.1|2617707_2619114_-|transcriptional-regulator	gnl|CDD|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	1.14765e-82
NC_009523.1|WP_011956868.1|2635684_2636215_+|ATP/GTP-binding-protein	gnl|CDD|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	1.10235e-56
NC_009523.1|WP_011956866.1|2633865_2634807_+|DUF1385-domain-containing-protein	gnl|CDD|377780	pfam07136, DUF1385, Protein of unknown function (DUF1385). This family contains a number of hypothetical bacterial proteins of unknown function approximately 300 residues in length. Some family members are predicted to be metal-dependent.	7.31426e-116
NC_009523.1|WP_011956858.1|2624146_2624626_-|phosphohistidine-phosphatase-SixA	gnl|CDD|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	4.09521e-34
NC_009523.1|WP_157041041.1|2616344_2617142_-|GDSL-family-lipase	gnl|CDD|239946	cd04502, SGNH_hydrolase_like_7, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	2.63842e-93
NC_009523.1|WP_011956871.1|2638174_2639680_+|DUF512-domain-containing-protein	gnl|CDD|132322	TIGR03279, cyano_FeS_chp, putative radical SAM enzyme, TIGR03279 family. Members of this protein family are predicted radical SAM enzymes of unknown function, apparently restricted to and universal across the Cyanobacteria. The high trusted cutoff score for this model, 700 bits, excludes homologs from other lineages. This exclusion seems justified because a significant number of sequence positions are simultaneously unique to and invariant across the Cyanobacteria, suggesting a specialized, conserved function, perhaps related to photosynthesis. A distantly related protein family, TIGR03278, in universal in and restricted to archaeal methanogens, and may be linked to methanogenesis.	3.51088e-134
NC_009523.1|WP_011956862.1|2630753_2631698_+|mevalonate-kinase	gnl|CDD|224493	COG1577, ERG12, Mevalonate kinase [Lipid metabolism].	4.46766e-84
NC_009523.1|WP_011956854.1|2619717_2620290_+|metal-binding-protein	gnl|CDD|370771	pfam09988, DUF2227, Uncharacterized metal-binding protein (DUF2227). Members of this family of hypothetical bacterial proteins possess metal binding properties; however, their exact function has not, as yet, been determined.	4.0719e-49
NC_009523.1|WP_011956863.1|2631810_2632932_+|tRNA-2-thiouridine(34)-synthase-MnmA	gnl|CDD|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NC_009523.1|WP_011956859.1|2624716_2626255_+|glutamine-hydrolyzing-GMP-synthase	gnl|CDD|234614	PRK00074, guaA, GMP synthase; Reviewed.	0

Protein sequences

>NC_009523.1|WP_157041045.1|2626316_2627147_+|helix-turn-helix-domain-containing-protein
MLSFSQILLHPIATCCNVAHVNDLLTTREVQDLLKLDRTTVYRMLKEGRLTGVKVGQQWRFHRREVEALIQGASSAAADRPAPTIDPRTRSPLTPVPLPLHCVQAIQDVFADLARVGVITTTTDGAPLTQVSNGCRFCALVQATDAGRAACRASWRALAARSDRTPRIATCHAGLKYIHARIEIGEQPAAMLIAGQFRVDDAPLDTRRLAHDFGIDPGELDAALGEVTILDDRMRAQLGSWLQKVAHTFEEIGRERAAMIGRLRAISDLAVIDRSH
>NC_009523.1|WP_011956859.1|2624716_2626255_+|glutamine-hydrolyzing-GMP-synthase
MHESIPVLDFGSQTAQLIVRRLRELGVYSELVPHDAPKEDVLALQPRGIVLSGGPASVYEPGAPQLPLWLRESDLPVLGVCYGMQVQAHALGGRVEGMQSREFGPAEITVVDPGLLFADTPMHQQVWMSHGDHIAALPAGFRVMAHSSGAPFAAAGDDQRRWYGIQFHPEVVHTRFGRDILRNFAFRICGCRGDWQPASFIAEAIARVRDQVGNGRVICALSGGVDSAVAALIVHRAIGDRLTCVFVDNGLLRQGEAEQVVATFREHFHIPLIAVDAADEFLDALAGVADPEQKRKIIGEKFVRIFEREARRIEGARFLAQGTLYPDVIESKAPDRQKGVTIKTHHNVGGLPADMQLTLVEPLRYLFKDEVRAAGLALGLPEEWVWRHPFPGPGLAVRVLGPVTRERLATLRAADAIFMHELRTAGLYRATQQAFAVLLPVRSVGVMGDGRTYADVIALRAVTTEDYMTADWARLPADVLARVSSRIVNEVPGVNRVVYDISSKPPATIEWE
>NC_009523.1|WP_011956858.1|2624146_2624626_-|phosphohistidine-phosphatase-SixA
MDLYLLRHAIAEERSNDGSDSARALTPEGAEKMRIGARGLQRLGVHLDRLLTSPLTRARETADIVGAALNIAPETVGALAPGCNAATLLDLLADMPRAKSVMIVGHEPDLSGIVADLTGGSRVVMKKGGLALIDLSSLDLGAGSLLWVLPPRVLRALGK
>NC_009523.1|WP_157041044.1|2620790_2622413_+|hypothetical-protein
MSGLPGHYQVGRQYDCCVRYASSVCDLLLCYNVHKPWLSVLSSQFSVLGSQFSMMIHPMRFFATIVLSTALTLLLAACGGAPPPPAALPTSLPETPTAAPSPTPIPLPTALPSPTPEAAQPQPTSLPEPTPLPSSSPAPATVTPLPTPETATASPLPPTPSRPSEGSFTGALIFLRDGALWLFDANGERLLVDRAYEFASSADGNLIAVTRETDQFDIWIVSRDGSALRRITNDRDIESSLSWAPDGSALVFAAADASEPLPQLWPDWALWCGASQVSVIDLASGQRQTLARGCDPAVSPDGRRIAYSAPPTARDTGMAGGAPVFGNALRLINRRGENGWNFASADGADAPLPNTGMLVYGPAWSPDGASVTYHRYLGMQVEVDINLSEIGGSFEGKGRPFAEGAGWLLPVRFASDGRRAAIIEHNYSDARGFGGYDAWSVQVVTFDGSRTVDLPQGPMTMIGGSATRLPRAASAAWSPDGTRLAVLLPPGWRPDASLNEPFDPTGAERPGEVWLWQPDAAPSVRLISNVDFASPLAWLP
>NC_009523.1|WP_157041043.1|2620324_2620729_-|hypothetical-protein
MTSINSQGHDQQTDRPGSTDRLASQRSGRRPSQPRFILQPVVLDDTATVTTGRPSDTFGMNEETGNQAPSAEERQPDRLNELSGSRRAPRKDVPLDYPIPMPGRHAIIGALLVCGVIAIMLFVTLLLTGRGPVI
>NC_009523.1|WP_011956854.1|2619717_2620290_+|metal-binding-protein
MPDTRTHDIITVATGALLAPAAYVLLESGGRDDAAAGAAVLTGAHLISGLLFSPDLDIDSAIDNRWGFFFWIWRPYMWIIPHRHFWSHSLVLAPLLRLVYFYLVTLLIVVWGAWILGRIGVGVPDLHAQASAWLFDAMRRNPDMVRLFIFGFISGSAAHTIADWLVTGGKRYMRMAGIRLRRDYRNHDLK
>NC_009523.1|WP_041333507.1|2619213_2619615_+|VOC-family-protein
MKPPSFDQFVTFMYVRDLHISAAFYENLLGLPLALDQGSCRIYRVAGDAFLGICQRSDAGDPSPSRALILTLVTHDVDEWHRYLAERGVVVEKPPQYNPVYNIYHCFLRDPDGYLVEIQRFLDPAWPAGMGKQ
>NC_009523.1|WP_011956852.1|2617707_2619114_-|transcriptional-regulator
MDVQERAIADLLTQPEDRHLAFVRANTRPGDLAQTLAAMANGSGGTVVIGMRGRQVEGVADADAARTMVLDAALACTPPLVLPLPAVVTCNGATLLVVTVPSGLPHVYSVNGTYLRREGPTNAPLPPDMLRHLLIERGETSWDRMTPANATLADLDPDKIAAYARRVGPIAEADPLAFLVRRGCLVQRTDPAKGTPDLIPTNAGLLLFGIEVERWFPQAEVTLVRYQGREMSDEFLREDIRDTLPETARRAERWIVEHMRRGSRMVGLEREDWTQFPLGAVREALINALAHRDYTIRGDSIRIMLFSDRLECYSPGRLPGHVTVHNLVDERFSRNETLVQALADLGLIERLGYGIDRMLRQMADAGLPPPEFRETAAGFMVTLYGHTGDDRADAGGADVAAWRRMGLNERQIAALLFLAAHQRITNRDMQELTPDVSAETLRRDLADLVERGLLLRVGDKRGAYYILK
>NC_009523.1|WP_157041042.1|2616958_2617723_+|peptidase-S16
MPPPIYPISTRSLCRFYAQLAAPNDGFRWYYSNKARNIRRAETSIVTDAHDAFPDELPLLPLRGMVVFPPCVVPVAVSRPASIRLVDEAVASGSLVVVSAQRDDDPAQWYAVGASALVHRLVRLHDGTLRIALQAFDRVVIDGVTQQEPYLRVQAHRLPDRLDNPDMTTHMHEALARARELLNALPPNEELRAQLESTDDPRHLAALMASMLLVRATLAERQELLELTDVGERLARIGALLAQELAILRGHLRM
>NC_009523.1|WP_157041041.1|2616344_2617142_-|GDSL-family-lipase
MAGAAIHQEKHRERRSQSRSPRDVCFLPCYYNTSENHRSAQRVEHRSDRVTGSRLGIWEVALEWYEDEVRQIEQLHEQAPPQPGAVVFYGSSSLRLWTTLSDDMAPWPVVNRAFGGSTLAACVHFFDRLVPPCAPRAIVLYAGDNDLGDGRTPDDVVRSLRAMLARIDASLGPIPVAYMSIKPSLARWNLRERIKRVNAEARLLMEQRPAGYYVDVYTPMLGADGRPRAELFDADGLHLSSAGYRLWRDVLRPYVAILAGAEKDR
>NC_009523.1|WP_011956862.1|2630753_2631698_+|mevalonate-kinase
MHASAPGKIILCGEHAVVYGRPAIAIPLNDVRARVSIIPGAPGSGVCFDAPDLGRRWLITSAPHDPLSELTLAILRQFGVQRMPDIEIAITSDIPIASGMGSGAAIATAIVRALASAYGRNLSAAEVSALVYESEQRFHGTPSGIDNTVIAYEQVIWFQRRSEPPHQIEPIAIAEPFTLLIGDTGVRSATRLPVGEVRRRWERDPSRYEMLFDAVADVVYQARRALAEGDRAALGPLLDRNQALLEEIGVSSPELERLITAARSAGAGGAKLSGGGWGGVMIALVEPETAQQVRQALQAAGATRVLETIVQAAA
>NC_009523.1|WP_011956863.1|2631810_2632932_+|tRNA-2-thiouridine(34)-synthase-MnmA
MAKIMVAMSGGVDSSLAAALLHEAGHDVTGVTLHLWEGDDDRLAESLCCSQEMTESARRVCAQLGIPYYVFNYQREFRRYVIEYFLREYASGFTPNPCLECNREIKFRALLARARTLGFDYVATGHYARIRADETRHNGEDAGLPPAERAQRTTYRLLRAVDREKDQSYMLYMLGQDDLARLIFPIGEYTKAEVRAMAAARGLASANRPESQDICFVPGGDYRNLLREERPDALRPGPILDLEGREVGRHQGLPLYTIGQRRGLGIATGQPMYVTALDVARNAVIVGPESALRRESLRAEWVTFVSGMWPEAPFDCLAQIRAHADAVPARVIPGEAGTVDVHFSRPQRAVTPGQAIVFYDGDVVLGGGRIARD
>NC_009523.1|WP_011956864.1|2632950_2633199_+|hypothetical-protein
MPPALLLLLLIVTASAALAHVLWGRRWVQIPIFWLAAAGGALIALAIGVRLPLRLITPAGVPILETTLGAWIMLIVASRLRL
>NC_009523.1|WP_011956865.1|2633261_2633705_+|hypothetical-protein
MGKWIGIGLTVVLLIVVGFIIGAYLSPDFRVASRDIALVILAIFQMISALISIALLLVLVYAVRTLTRVSRTTLIPKLEEVSVKLDQVLEQGRGVAANLRDTTSTVSGTTSFLADRAIAPVIRVSGLMAGVRAAAAYLARRDEDQTS
>NC_009523.1|WP_011956866.1|2633865_2634807_+|DUF1385-domain-containing-protein
MSERTFSYGGQAVLEGVMMRGLRQATVAVRTPSGEIVFRHEPLNVERRRMWENLPFLRGILMLWDTLNLGVRALNFSASAALGEEEQPQSKGAVALTLIIALAFAFGLFFVVPLLIASLLERVGATPLMRDAAEGFIQLGIFIGYLTLIGRMPDIQRTFGYHGAEHKTINAYEAGAPLTVESVRSFTLLHPRCGTSFLLVVVVLSIPFFALFGGLPLGERLLSRIILVPVIAAVSYELLRLSAAHFHRGWVRRLVAPSLALQRLTTREPDDTMIAVAIAALIPVLAADGVVPAAFDESLAHGVARPPVDAALA
>NC_009523.1|WP_011956867.1|2634836_2635658_+|DUF4388-domain-containing-protein
MPLVGNIRDFGLSDFLYLVDRGYKTGCLHLSRTDEMASLYFEKGKLLTATRKDDNVPVTDLLVRKGKLTPVQAEQAAQAHQNQNGASMSQVLIDLNLIGRDELQRVLQQHIEESVYALFGWNEGEFRFEQGQRPEPTAPIMPTPLPVEHLIMEGVRRIDEWGRIKDRIPSTDMVVKFIEQPIERAKGINLAADEWRVFARINGKDTLAEIARKTGMSEFDVCRIVYGFLTAGLVDVIRKPAPVPMLATGRPLAEAPRIKKSLVTRIINRIRGM
>NC_009523.1|WP_011956868.1|2635684_2636215_+|ATP/GTP-binding-protein
MQTVKMVISGAVNAGKTEFIKTISEIEVVSTERRATDDTRLIKKETTVAMDFGRIAIGDDLVLHLFGTPGQKRFDFMWEILSEGMLGLVILVDSTRPETFRETNRIIDFFMSYRETPYVVAANKQDRPNAWSPEELRLALRLPAHIKVLPCMATDRESVKNVLLELLDVIMQRSED
>NC_009523.1|WP_011956870.1|2636546_2637473_+|MBL-fold-metallo-hydrolase
MTDDRYGLPENIALVDDYHLGRPQVVGTYVLLGENPVIVDPGPASVLPNLETGLRQIGLEFSDLHGIVLSHIHLDHAGATGSLVRYFPHLKVYVHHRGAPHLIAPDKLLRSATRIYGGQMDYLWGEFLPVPVEAVVTLGGGETIRVAGRTLRVFDAPGHASHHLIYLDEATGAAWVGDTTGLRMPGYTYVRPATPPPDIDLEAWRRTLDMLLALKPRMLLLTHFGPAHDPERHIAEMWEHTMRWAETVRAGLERGDDEATAAAQLAALADAEMGAEANEAVRQQYAQAGAVEMSWHGLARYWRKKMEA
>NC_009523.1|WP_157041046.1|2637947_2638139_-|hypothetical-protein
MKSPLEGFSPGVHLRGRCHGARLGGRPARSVLSGAVSTAAGYTLQIGLIFHKRAPANNSAFSD
>NC_009523.1|WP_011956871.1|2638174_2639680_+|DUF512-domain-containing-protein
MEYQPDLKRITGEGGEIAAVAPGSIAAELGLQPGDVVLAVGDLRLRDVIDYRFAIAEETIELLVRRGDEEFIYEIEKDPDDDLGIEFVEPLFDRLRTCNNKCPFCFLTQMPKGLRRSLYLKDDDYRLGFLYGNFVTFTNLTEADWQRIEQQRLSPQYISVHATDRALRAVLLGKPDVPDVLEQIRRLGRIGVTVHTQIVALPQINDGEALHQSIRDLAALYPIVQTIAVVPVGLTKYRFEGKRPQTIKTAIQIHETPEWIDATWERQPRWDDALHPHERQVANLGYCARQIVAADVPMRCYRSDEAPRIIDLVEAYQADFRRRYGIGLVYASDEFYLLCGRDLPPAADYDGMPQYSNGVGMTRDFLDGWAKAQRRLPARLPQPAELTIVCGTLIAPILQRVIDRLNRIVNLHARLLPVVNRFFGETVTVSGLLMGQDVAPAIRAAGARRVLLPRVMFDHTGARTIDEYTIERIGAESGAVVAVAGEPDDIVRYVRALSVAP

Crispr_ID: NC_009523_53

• CRISPR_ID: NC_009523_53
• CRISPR_location: 2904625-2904730
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_53

Consensus_repeat	Method
GAGGGGGATCGAACCCCTGACCTC	CRISPRCasFinder

spacers of NC_009523_53

>53.1|2904649|58|NC_009523|CRISPRCasFinder
AACACTGCCAGCGTTGCGCTCTCCCAACTGAGCTACTGCCCCGTGCTCTGGTGGAGGT

CRISPR arrays and Neighbor proteins around NC_009523_53

CRISPR arrays

The CRISPR arrays of NC_009523_53

>merge|NC_009523|53|2904625-2904730|CRISPRCasFinder
GAGGGGGATCGAACCCCTGACCTCAACACTGCCAGCGTTGCGCTCTCCCAACTGAGCTACTGCCCCGTGCTCTGGTGGAGGTGAGGGGGCTCGAACCCCTGACCTC

>NC_009523|53|50|2904625-2904730|CRISPRCasFinder
GAGGGGGATCGAACCCCTGACCTC	AACACTGCCAGCGTTGCGCTCTCCCAACTGAGCTACTGCCCCGTGCTCTGGTGGAGGT
GAGGGGGCTCGAACCCCTGACCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957077.1|2911203_2914416_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|225461
NC_009523.1|WP_011957065.1|2894304_2894985_-|TVP38/TMEM64-family-protein	unknown	unknown	gnl|CDD|223475
NC_009523.1|WP_011957075.1|2908429_2909629_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NC_009523.1|WP_157041067.1|2891510_2891648_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041335297.1|2916866_2918039_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957066.1|2894981_2895692_-|glycosyltransferase	unknown	unknown	gnl|CDD|133016
NC_009523.1|WP_011957068.1|2896426_2899192_+|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|236645
NC_009523.1|WP_011957073.1|2906585_2907689_+|rod-shape-determining-protein-RodA	unknown	unknown	gnl|CDD|274033
NC_009523.1|WP_011957072.1|2904902_2906540_+|DUF11-domain-containing-protein	unknown	unknown	gnl|CDD|275079
NC_009523.1|WP_011957078.1|2914604_2915456_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|224561
NC_009523.1|WP_011957064.1|2892998_2894144_-|glycosyltransferase-family-1-protein	unknown	unknown	gnl|CDD|340842
NC_009523.1|WP_011957076.1|2909745_2910543_-|hypothetical-protein	unknown	unknown	gnl|CDD|379952
NC_009523.1|WP_011957069.1|2899204_2901757_+|PAS/PAC-sensor-signal-transduction-histidine-kinase	unknown	unknown	gnl|CDD|380491
NC_009523.1|WP_085979421.1|2901674_2902732_-|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011957071.1|2903908_2904517_+|response-regulator	unknown	unknown	gnl|CDD|381147
NC_009523.1|WP_011957067.1|2895796_2896177_-|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl|CDD|376605
NC_009523.1|WP_157041068.1|2918292_2920674_-|hypothetical-protein	unknown	unknown	gnl|CDD|367843
NC_009523.1|WP_041333581.1|2915483_2916845_+|CRTAC1-family-protein	unknown	unknown	gnl|CDD|369440
NC_009523.1|WP_011957074.1|2907837_2908422_+|PspC-domain-containing-protein	unknown	unknown	gnl|CDD|377200
NC_009523.1|WP_011957063.1|2892276_2893002_-|PHP-domain-containing-protein	unknown	unknown	gnl|CDD|213987

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957077.1|2911203_2914416_-|tetratricopeptide-repeat-protein	gnl|CDD|225461	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription].	1.04737e-39
NC_009523.1|WP_011957065.1|2894304_2894985_-|TVP38/TMEM64-family-protein	gnl|CDD|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.69773e-25
NC_009523.1|WP_011957066.1|2894981_2895692_-|glycosyltransferase	gnl|CDD|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	1.85129e-25
NC_009523.1|WP_011957068.1|2896426_2899192_+|EAL-domain-containing-protein	gnl|CDD|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	6.67708e-115
NC_009523.1|WP_011957067.1|2895796_2896177_-|large-conductance-mechanosensitive-channel-protein-MscL	gnl|CDD|376605	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.	4.94307e-47
NC_009523.1|WP_011957073.1|2906585_2907689_+|rod-shape-determining-protein-RodA	gnl|CDD|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	2.00319e-124
NC_009523.1|WP_011957072.1|2904902_2906540_+|DUF11-domain-containing-protein	gnl|CDD|275079	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD. Members of this family include NosD, a repetitive periplasmic protein required for the maturation of the copper-containing enzyme nitrous-oxide reductase. NosD appears to be part of a complex with NosF (an ABC transporter family ATP-binding protein) and NosY (a six-helix transmembrane protein in the ABC-2 permease family). However, NosDFY-like complexes appear to occur also in species whose copper requiring enzymes are something other than nitrous-oxide reductase.	2.18288e-07
NC_009523.1|WP_011957078.1|2914604_2915456_+|alpha/beta-fold-hydrolase	gnl|CDD|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	4.08726e-51
NC_009523.1|WP_011957064.1|2892998_2894144_-|glycosyltransferase-family-1-protein	gnl|CDD|340842	cd03814, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	1.9667e-127
NC_009523.1|WP_011957076.1|2909745_2910543_-|hypothetical-protein	gnl|CDD|379952	pfam17248, DUF5317, Family of unknown function (DUF5317). This is a family of unknown function found mainly in Bacteria. Members of this family have multiple trans-membrane domains with the majority typically constituted of 4 trans-membrane regions.	1.57231e-12
NC_009523.1|WP_011957069.1|2899204_2901757_+|PAS/PAC-sensor-signal-transduction-histidine-kinase	gnl|CDD|380491	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. Ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. In most cases, ligands are monosaccharide including lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. The LacI family of proteins consists of transcriptional regulators related to the lac repressor. In this case, the domain sugar binding changes the DNA binding activity of the repressor domain.	4.0546e-41
NC_009523.1|WP_085979421.1|2901674_2902732_-|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011957071.1|2903908_2904517_+|response-regulator	gnl|CDD|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.59855e-57
NC_009523.1|WP_011957075.1|2908429_2909629_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.37975e-44
NC_009523.1|WP_157041068.1|2918292_2920674_-|hypothetical-protein	gnl|CDD|367843	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain. This domain is normally found at the C-terminus of secreted bacterial peptidases. They are not present in the active peptidase. It is possible that they fulfill a similar role to the PKD (pfam00801) domain, which also are found in this context. Visual analysis suggests that PKD and PPC are distantly related (personal obs:Bateman A, Yeats C).	0.00114916
NC_009523.1|WP_041333581.1|2915483_2916845_+|CRTAC1-family-protein	gnl|CDD|369440	pfam07593, UnbV_ASPIC, ASPIC and UnbV. This conserved sequence is found associated with pfam00515 in several paralogous proteins in Rhodopirellula baltica. It is also found associated with pfam01839 in several eukaryotic integrin-like proteins (e.g. human ASPIC) and in several other bacterial proteins.	1.20155e-21
NC_009523.1|WP_011957074.1|2907837_2908422_+|PspC-domain-containing-protein	gnl|CDD|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	6.18184e-26
NC_009523.1|WP_011957063.1|2892276_2893002_-|PHP-domain-containing-protein	gnl|CDD|213987	cd07432, PHP_HisPPase, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to produce histidinol. HisPPase can be classified into two types: the bifunctional HisPPase found in proteobacteria that belongs to the DDDD superfamily and the monofunctional Bacillus subtilis type that is a member of the PHP family. The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	1.46359e-32

Protein sequences

>NC_009523.1|WP_011957071.1|2903908_2904517_+|response-regulator
MNTPSDTILVVDDTPANLAILFTGLRNAGYKVLINERGDIALQTAAYALPDLIILDVMMPGIDGFETCRRLKEDPRTRDIPVILMTALTDPIDEVTGLRAGAVDYITKPIHVEVVLARISTHLTLRKLYRDLERKHAALKEALATIKTLSGIIPICAWCGNKIRDERGEWMSVATYLETHAEVTFSHTICPDCYERITGEAP
>NC_009523.1|WP_085979421.1|2901674_2902732_-|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_011957069.1|2899204_2901757_+|PAS/PAC-sensor-signal-transduction-histidine-kinase
MPNPSSSSRRAIGVLVAIVHQPFWLGTVDGAQQRDVDLVCFVGGVISTAVQPLIRSPLAHVLPARAFFDLAKGPRIDGLITWGGSRAGFGVNLNETEMEEFIAPYRHLPIINYEGIIKGIPAVLTDTYRGMCDLIVHMIEVHRSRRIAIIRGPARHLESEERFRAYQDTLRRYGIPFDPALVVRASDWGKAVGVEAVHTLIRERGRRPVTDVDAVIGSEIDYAVGALQTLEEYGVRIPDDVAVAGFNDHLDAQTSNVPITVMAKPFYEAGVAAVHALLDLIEGKTVPDRIDVPARLIVRRSCGCWSLDPVAPHLISDAAINSVAQGSPLSDQETRLVEQIGRVRESARGGVSHVSWIDALIRGMRSTDPIQNNRERDRFWRLFETELASTRDPLELDRWYDVLSELFFLVTSALKHTDQLSQTNRLFLQRVHLALMQESERARIERRARTVENTHTLLEISHAMMLTRSIEQLFEILVYRLPELGITDCNLVLFDDFYDIAREPEFPEWARVVLAMRDGKRLSLSPEGIRFPSRQILPDTWLEEPQSRALIVNPLFFGARYFGYIAARIGTRDGKAYLMLAQQVSSALQSVFLWRDYHESEYARRESEARMHTLIEHIPVALWAKDRTGRYIMQNSVMRTLVKDRDQDDGSGVDHVIVQWKTCEAWAFEGKTVSFEHTIFVRQQVRLFRHIMAPVRVDGQVTAILGLMFDITEQRAIEESLRSAKEAAEEARRIAEGANRAKSIFLSNISHELRTPLNSILGYAQILQVDQRINDHQRKGLHIIQASGEHLLSLINDLLDLAKVEAGKMQFQATIFDVYAIDFIKIRFDFWTAFCVSAKFGSYAARNMFP
>NC_009523.1|WP_011957068.1|2896426_2899192_+|EAL-domain-containing-protein
MSFSGTILVVDDHEHVRNALVRQLEVAGHTVIARSDGIQALEAVQQYTFDLILLDILMPGMSGDKVLAALKADAALRHIPVIVISGDQDLDLVARCIELGAADYLGKPFNKTILHARVNACLEQKRLRDAEQAYLRMRLYLLSAAADHPAITDNPDIQEALHHPDNLATVDQTIQALLNRLEAEQRERRRAEAELRNLNLALEQRVAERTMLAEQRAEALKRSEEALRQQTNLLRAILDSMGDAVVVTDTDGHLIHHNPAAVQILGDRLASLLPGSSSAPVAQSPDGRSWLTPHDLPFARALHGESVDAAEVRLPATDCHPEQWLSITARPLRDTDGLSGSVAIVRDVTEAKRAEEALRASEERYALAAQGANDGLWDWDLVSGKIYFAPRWKAMLGYDDTDIGTSPDEWFRRLHPDDRERVEWRLLAHTRRLITSFELEYRILHRDGNYRWMLCRGMAVWDEHGRATRMVGSQTDITGRKQAEEQLAYGALHDALTGLPNRTLFMDRLSLALKRAQREKHLFAVLFLDLDRFKTINDSLGHAAGDELLIAVARRLESVLRPGDTVARLGGDEFAVMLDRLNAPEEAEWIVERIHQALQAPLSVRGHTVYTTASIGLALGNEGYERPEELARDADTAMYQAKMQRRARHVVFDPDMRRKAVSHFQLENDLRSAIERNELRVHYQPIVALNGRRVVAFEALARWQHPQHGLISPDQFIPLSEEIGLINTIGHWVLRDVCHQVREWRRRRPRHFDMWVNVNLSAHQLAQPDLVAQIAHAIADAGIPPNAIKIELTENTFVTHREIAIAQLNELRSLGVGVCIDDFGAGYSSLGYLSQFPVDTLKIDRVFIARLGMMREHYEIVKAIITLAHSLGMTVVAEGVETEEQATMLSALRCEYAQGWLFGRALPADQVEAFLDSRSSL
>NC_009523.1|WP_011957067.1|2895796_2896177_-|large-conductance-mechanosensitive-channel-protein-MscL
MFEGFKTFVMRGNVIDLAVGVVIGTAFSAVVNSLVNDILMAIVATLIGQPDFSDVLVFGAVRLGAFITTIVNFLIISAALYFLVVVPINKLSEFTRRNEPPPAPPAPSAEEKLLTEIRDLLRQNIT
>NC_009523.1|WP_011957066.1|2894981_2895692_-|glycosyltransferase
MSGAPSIIVPTKNEAALIGAFLAALPGSVELIVVDASDDDTPAIIERLRPQNTRIIRASAGIAEAREIGASAAHGDWLIFSDADVRFAPGYFDRFTRYTDADAIYGPKYATAAFSWYSHIFTGGQQLMHRLGFPAASGSNMAVRRDVLISVGGFRCDLPVNEDSELFLRLAHRGYHVVFAPDLAVHSLDDRRLRRGAVRKLLHSTTRCALIALGMRMPLPQRLLRHDWGYWRATRR
>NC_009523.1|WP_011957065.1|2894304_2894985_-|TVP38/TMEM64-family-protein
MNTPPDPIRWLFLLAGVLVLALLIIVIGQSGAVRHVFSAASPDEAAAILREFGWWTPLVSVLLMVLQSVLAPLPGSLIAAANGAIYGIWKGTLLSWIGGMAGGLATYALGRWLDTAIAHRWKATRLQQRLVEVSSSRGFWIVLIARMTPIISLDFIGYLAGIARMPLLSYTLANAIGMIPGMLAYTAIGSELMQGRLLSWYTALALLALIALFFIGRHAVRRLLER
>NC_009523.1|WP_011957064.1|2892998_2894144_-|glycosyltransferase-family-1-protein
MRIALITETFLPNVNGIVTTLCRLLEYAQSKGHETLLFAPQESPAQYAGAQIIPLRGIPFPLYPDIRFTPPQPGIVPALRQFRPDLIHLAGLMVLGPAARFAARQLRIPAIATYHTDLPAYSVHYGLGALREAAYSYLRWIHNACTLTLCPSSTILADLRRRGFRRLRLWGRGVDTVRFHPAHRREEWRTAIGARADERVLLYVGRLAAEKRLDLLADALRGMDGVRLVLIGDGPARPSLERRFAGMPVIFTGFLNGHDLAVAYASSDIFVFPSDTETFGQVVQEAMASGLPVVAAHAGGVIDLVRHEETGIFFDPGSAYSLRSAVSRLVMNPTLRIAWGQAGRVAAEQRSWPRVLDELMEYYRRALRWRPRLLSLRRAVS
>NC_009523.1|WP_011957063.1|2892276_2893002_-|PHP-domain-containing-protein
MTTWSRADIHVHTRYSDGHSSVAQVLEYADHIGLHVVAITDHDTIDGALEARRMARGFNVEVIVGEEVSTADGHLLVLFLERALPPGRPAPETIAAAHEQGALCIVAHPFDWLVSSFGDALIRHCGGEHPAWRIDGVEVFNASLPFPGMNARASLVTAALGLPACGGSDAHHFSTVGLGYTLFPGTSADDLRQAIIRGEVRAGGRAWTAGHYAAVAGLRARRSLARAARIVTRPMRPRRVA
>NC_009523.1|WP_157041067.1|2891510_2891648_-|hypothetical-protein
MTVSRGGTTNLVRQGGSARRLATEVAAGRREARLRGLAGAHPARS
>NC_009523.1|WP_011957072.1|2904902_2906540_+|DUF11-domain-containing-protein
MRHIVAVRLCALLLLVLASTFGAPAPTTAAPQTFTVSKTVDTADGVCGADCSLREAISAANANPGADTIIVPAGTYTLTITTTLEDDNADGDLDIRDSLTLIGAGAATTTIIAAEGDRVFHLLATATVTITGVTLRGKGETPDSGGVLLVTPGANLILRDSVVRDGRAVRGGGIEVRGDGVSPASASATIERVTFTANRAASLGGAISVFNGGSALLTNVTITGNSAGNSGGGISVSLDQTIINPPKSAATLNNVTIVRNTADDDRNDIGEGGGVSVRVDEQVINQLRLRNTIISDNADLSPTPARVNPDCFNVLESLGYNLIHRSTGCTILGTQTGNVIGVSAQPGALLDNGGPTPTVALLSGSPAIDAGDPAVGSSCAATDQRGVARPIDGDGNGLAVCDMGAYEAPVPGDADLSVILTAQPDPVAPGGTLTYSVVVLNAGPAAAGNVQVEFTPPPGSTSIQTGGLGWVCSSGSTLTCERGALAAGSVAPALTVTLTVPPGGGWITATAVVASSQRDPVITNNTGVLSTFRGRPSVWIPLLMR
>NC_009523.1|WP_011957073.1|2906585_2907689_+|rod-shape-determining-protein-RodA
MVKTWRDYNFPLLLCVLILLGFGAAMVYSATLRDPLTQGYFSRHLVNLLVGCAAMALLTTVDYHAFEAWIVPFYLGAVALLGLVLVVGQVSSGAQSWIDLGIRTFQPSEPAKLLVILALAAYWSHNERQPQAWRVVIASLILVGIPTVLVFLQPDFGTAMVFVAIWTAMALAAGVRLWQFGVLFIAAVPAAIYGWTHILQPYQRTRLLIFLDPLKYDPDLKQGAWNIMQSLTAIGSGGLTGRGWTHGLLSQGNYLPVQYSDFIFAITGEELGFLGAALLLVFLGITIWQALSVSVIARDTFGRLIAVGIAAMLLCHVLVNVGMNMSIMPVTGIPLPFISYGGSFTMTSLAAIGLLQSIALRRRRITF
>NC_009523.1|WP_011957074.1|2907837_2908422_+|PspC-domain-containing-protein
MQSRLMRSRRDAVIAGVCGGLGEYFNIDPVIVRLIFVLATLTSGIGFVLYPVLWLIMPKAPPGMPPPFPDTAQHMGNSGAVFTRQASEAQYARQAGYGEPSAYSSSRGTVFADAPPEPPNTGQTIDLRLDPSMAPLSPQSAPAPAPRRRRLNWAGIVLIGLGLIFLAEQFGIDTDIVFPLLMIVVGGVLIFRNR
>NC_009523.1|WP_011957075.1|2908429_2909629_-|HAMP-domain-containing-histidine-kinase
MNSGIALQTVDPSSAGVLAVLHQIADATDTAGLAAVLHKAAISLFPRVRIDLFVVADSAEHVLITCGEHDLPHPPAFHRGMSFVAWLNQHNYKTRIVPVSVARQNQGQLIVSRPHEEISQDILVIAEQIAPVVGLWLIAHRHQVALEQHEMQLLATTERLRPIEEMQLRVTLAAGAAHDIGNLFASVLGHAQLLQQAAPLELQNDLKTIEQAARDGHHLLRRLLSARNASYMPETTMAPVLLTELVHDALRLTQPWWGARHSVTVKIALTPVPPVRGHPADLREVLVNLILNGVDAMPEGGTLTVRTYSVNERAIVEISDTGVGIAPAHQNAIFQPFVTTRKGGSGLGLSVSRAIIERYGGTISVSSIPGRGATFSISLPGVRSADMLPEPPMLQRTAS
>NC_009523.1|WP_011957076.1|2909745_2910543_-|hypothetical-protein
MALFAVYLVCALVGAWIAFWRAPEWPRYNLLLAIAAVPQIGQVLGIRISEMFVVSVVAMTLWCLCNYRIAGVPMVAVGAAFNALAMTWHGGAMPVRADILAELGYHFDPGVLLEGSKDVVVHHSPLWLLSDWIVISIGTFILIISPGDILVAGGVVMWLLFSRTAALERESSMLACHSASHAETRKNLIPGHSTRPALTRLALLAAADPALAERLLHDPFDVANAHPHYHVTLDANDRATLAAIRARARTVGEFLGELAAEVDGF
>NC_009523.1|WP_011957077.1|2911203_2914416_-|tetratricopeptide-repeat-protein
MTLRFQQKLVVPTSARPLIERPNVLAQLDRAIRSKRVVALAAPAGWGKTTALAQWVAQRTMPVAWYTLDSADRDPHVFLDYLLHSVADFVPGAPGIAARLAETTPQGLAEMIHQVALAFADAPEHFALILDDVHVLDDDQAQSIPGVSLVFTLLASIAEYASHCHLVLASRTLPVLHGMVRMVAQQRAAVFDYSVLQFHRDDTQRLAGITSGLILSDEAAEQLTASVGGWVTGIVLSLDQPVAHKDGMTGQQVVDRHLMHVPTPEEAVIEANTSQVYAYFAEQILAPLPADLQRFLEDTSVLHDLSPQRCDILRSADNSAEYLDEIRRRGLFVSSRAGWLSYHSLFRDYLRSRLARDPQRCRQLLRSAGDLYAAEDDIERALDCYLAAGDDQHAIDLIRSAVPRLRQCSRQTTLLTCFERLHRARRTNDQRTASGGFPPATRAARKQSIPPDLLLAEARVYSDLALWERAYLALHLAGAIGDASIRAEAQILSAELQVLQGDYARAQHALRFVDVNNLDNRLRLEYHVAAARAHIMAGEVAAAITELERAHTLVATLIDTVDNPAALADIYDNLGWAYAAQGDRPSAIRYLKRADACWQSSGNQGRRALTLNNMGVMAMEEGRFAEARTTLDLGLEIARQTELRREETVLLCSLAELDLREGDFEQAIQRFTTAHALATRLDIASSVEAAAAGALWAAILSDNLTLAQAWHDTAASIVTPLQPEVRGRLALARAALALQCPHPEFASFASLLAEATTYEESLSEDERIYMALLRTELAFARSGWHAAASLWEQFAARAATLPETLWRRFASMHRPLFEAAAPYDPRAGRAIALSRTASPSSVRWRITTLGGFACLVDGKPVDLSQLHRALLVRLLDAGPQGLAVERLWEAVWGDDVISMPALHQALRRLRLQTGLAASAREGAVAIRSGWDAIEYDVRELERILETPPSLESIQRAMTLYGGEFLPGAPASAALWVEARRAHLQQRYLEAIEQYAHSIEQNLPQQAMFYYQHVLQIDGCREHTAARLMRLAARYGNRTLVAATFEHLKGSLRALGASPEPATTALYRQLT
>NC_009523.1|WP_011957078.1|2914604_2915456_+|alpha/beta-fold-hydrolase
MNHPLQSSPASAPFDARSRSFAVFAGTTGVLLIHGFGGDPTEVLPLAAALIHDGYSVYAPLLPGHGTLPDALAGVQWQQWAEATAHGFAALRRRCDDVVVVGFSMGGLLALILAAHLPVARLAVLAPALRLRGQLLVNLSSIARHVISWYYPLAGADFSDPELRALLRNRVPDANLDDPLVCEQLRRMVRVPLEAVHQLTLVQRSARRLLPRVTAPTLIVQGRNDQTVDPRSAEQILRHIGSLDRQLIWMEGYGHQLLVGDGGERTVRTIMAWIQNDNAGRGM
>NC_009523.1|WP_041333581.1|2915483_2916845_+|CRTAC1-family-protein
MFVDYSHLIRHNPPRLHYGVAVVDVDDDGVWELFVAGFDGANRVLRWDGAGFVDIADNILADAQRQAIGVAAGDIDGDGREEIYVLNTDTFAGRKRFGDRLFDYQETGWVDLFELPQNQEALNLTAGRSVAVVDRLGAGRYGFFVANYGGPFRLYELDRFGEVQDMASAAGISFTTGGRGVIALPLVTPRMDIFTVNENGPNFLFANRGDGTFEEIARRAGLPDPHEHGRGVAAGDFDDDGRFDLVCGNWEGPHRLFLQKWDGLFVDAAPPDMAEPSRVRTVIAADFDNDGELEIFFNNIGEPNRLFTRRNGGWTKIDPGDALEPGGLGTGAAVGDFDGDGRLELLVSHGEADLQPLSLYRTMPNDHAWLRVMPLTRAGAPARGAVVILESGGRRQLRTIDAGSGYLCQMEAVAHFGLGRVRTVDRIEVRWPDGATVTIPSPAPNQVLRVPHP
>NC_009523.1|WP_041335297.1|2916866_2918039_-|hypothetical-protein
MIRAPESQSTGRLVDSPFAIAAQIVETIGPRPPGSIGEAKTAAFLDARLRQSGLRLSAESYHASHPPDYDGIVYGVLAIAGVIGFYWTPLVAILVFAACCGATVLTLWYDTAFLNRRILSQNVIATRAAEGVMRWRLVVLAPLCSPPAVGHWALALGSGLTGRIGRTVAATLLLALGIAAAAPFSFEVRLWLWYAQAAPAVALLVQGIAALVVQRAPATPGAISYAGALATLICAAAHLRDLQHTEVWMIGVGAASSAAGINDLLRRYPFEPQQTLFVGLDGIGSGELCYLAAEGALHPRLADSLLLRLTARVVDSGQATARPRAYRGITLAGMLRRRGLRTLGIASLDRYGRIPYRNERNDDISRLDAAHLDNSVRLIVGLARSIDTIA
>NC_009523.1|WP_157041068.1|2918292_2920674_-|hypothetical-protein
MSNRSTPRHKPALTLALLGTLLAIVVGVPLTIVRAQQVILLAQIGPPPQGDVGSIITLTFQLTNNINDATAASPNTSFTITTANVPSGVTVSSPGVIQLPNNVPGGTSTTFTLQLSISSTAAPGTYNNLLVTAAGSYNSTSGVRNVSTNTFGTFVITVGGATATPTLSPTVSPTPTRTPGPTPTPGPVCPEGVRDPGNDRGSARLVLIDSPVTHGICEIGDEDWFRFGGVGGKVYTIDIERMDAGLDLSLELYDENGQRLAFNDDFFNRDPARPDPKDIKPRIQSWRAPRDGIYYVRVRDTLSIGGGNRTYVFVVRSESYGPTPVVVGEVCRDLYEDDGLPEQAKLILPNEIQPGRRLCPTGDADWVRFFGKAGKVYYIYTDTRPYRNTPDFNNQTQAGADTVMYLFDRDGSRLLDFSDDIAGSLDSQIRFVPQVDGFYYVQIKNNGDLGNQFIRYDLILQLCIPDEECGRAPQPAVLPAPGAPTPTVAPFTDRTPTPTGTPAPGAFEGGAPNGAEDGSTRALLNGPLVGFADVAFDQLWQRTDRVVASGRVQRSWLWGPRGLMARAEQYQQAASGLRQVQYFDKGRMELNDPFGDRSSPWFVTSGLLVMELVTGRMQIGANEFVQREPAGIPVAGDADDPNAPLYASFAAVITQTAPDRTGQAPRQTIDRQGQVGDYAGPVRSETRFARYIAESGHNIPAVFWDYLNARGMVYEQGRLRNDRLFDWLFVVGYPISEPFWARVRIGGVERDVLIQLFERRTLTYVPDNPAGWRVEMGNVGRHYYRWRYGEELP

Crispr_ID: NC_009523_54

• CRISPR_ID: NC_009523_54
• CRISPR_location: 3064486-3064577
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_54

Consensus_repeat	Method
AGCCCGCGCAGGCGGGCTTCGCCT	CRISPRCasFinder

spacers of NC_009523_54

>54.1|3064510|44|NC_009523|CRISPRCasFinder
TGGATAGCCGAGGGCTTATGGTCTTTGAAAAAATAATCCGGTAT

CRISPR arrays and Neighbor proteins around NC_009523_54

CRISPR arrays

The CRISPR arrays of NC_009523_54

>merge|NC_009523|54|3064486-3064577|CRISPRCasFinder
AGCCCGCGCAGGCGGGCTTCGCCTTGGATAGCCGAGGGCTTATGGTCTTTGAAAAAATAATCCGGTATAGCCCGCGCAGGCGGGCTTCGCCT

>NC_009523|54|51|3064486-3064577|CRISPRCasFinder
AGCCCGCGCAGGCGGGCTTCGCCT	TGGATAGCCGAGGGCTTATGGTCTTTGAAAAAATAATCCGGTAT
AGCCCGCGCAGGCGGGCTTCGCCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957199.1|3064771_3066133_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379240
NC_009523.1|WP_011957195.1|3061121_3062021_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224054
NC_009523.1|WP_085979449.1|3062055_3062958_+|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl|CDD|234631
NC_009523.1|WP_011957190.1|3054702_3055482_-|DUF4397-domain-containing-protein	unknown	unknown	gnl|CDD|379570
NC_009523.1|WP_011957193.1|3057864_3058968_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009523.1|WP_011957200.1|3066178_3067309_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|378925
NC_009523.1|WP_011957191.1|3055622_3056660_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_041335347.1|3062988_3063600_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NC_009523.1|WP_011957204.1|3071102_3073289_+|serine-carboxypeptidase	unknown	unknown	gnl|CDD|227632
NC_009523.1|WP_011957194.1|3059314_3060346_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|132489
NC_009523.1|WP_041333620.1|3060867_3061083_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957192.1|3056662_3057868_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|226925
NC_009523.1|WP_011957203.1|3070057_3070978_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957207.1|3074817_3075582_-|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NC_009523.1|WP_011957201.1|3067322_3068558_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009523.1|WP_011957209.1|3076455_3077439_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|379873
NC_009523.1|WP_011957206.1|3073748_3074810_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|184875
NC_009523.1|WP_011957208.1|3075663_3076275_-|flavin-reductase-family-protein	unknown	unknown	gnl|CDD|224766
NC_009523.1|WP_011957205.1|3073293_3073710_+|c-type-cytochrome	unknown	unknown	gnl|CDD|226005
NC_009523.1|WP_011957198.1|3063596_3064457_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223912

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957199.1|3064771_3066133_+|GNAT-family-N-acetyltransferase	gnl|CDD|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.41062e-10
NC_009523.1|WP_011957195.1|3061121_3062021_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.07543e-85
NC_009523.1|WP_085979449.1|3062055_3062958_+|ribosome-small-subunit-dependent-GTPase-A	gnl|CDD|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	1.81701e-124
NC_009523.1|WP_011957190.1|3054702_3055482_-|DUF4397-domain-containing-protein	gnl|CDD|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	4.02891e-39
NC_009523.1|WP_011957193.1|3057864_3058968_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.10377e-18
NC_009523.1|WP_011957200.1|3066178_3067309_-|ABC-transporter-permease	gnl|CDD|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	7.83515e-38
NC_009523.1|WP_011957191.1|3055622_3056660_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.92097e-50
NC_009523.1|WP_041335347.1|3062988_3063600_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	5.19985e-26
NC_009523.1|WP_011957204.1|3071102_3073289_+|serine-carboxypeptidase	gnl|CDD|227632	COG5322, COG5322, Predicted dehydrogenase [General function prediction only].	6.07825e-38
NC_009523.1|WP_011957194.1|3059314_3060346_+|GNAT-family-N-acetyltransferase	gnl|CDD|132489	TIGR03448, mycothiol_MshD, mycothiol synthase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	4.88087e-11
NC_009523.1|WP_011957209.1|3076455_3077439_+|FHA-domain-containing-protein	gnl|CDD|379873	pfam16697, Yop-YscD_cpl, Inner membrane component of T3SS, cytoplasmic domain. Yop-YscD-cpl is the cytoplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus.	0.00025687
NC_009523.1|WP_011957192.1|3056662_3057868_-|GNAT-family-N-acetyltransferase	gnl|CDD|226925	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only].	3.08764e-40
NC_009523.1|WP_011957207.1|3074817_3075582_-|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.57671e-73
NC_009523.1|WP_011957201.1|3067322_3068558_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.19389e-51
NC_009523.1|WP_011957206.1|3073748_3074810_-|alpha/beta-hydrolase	gnl|CDD|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	1.15736e-30
NC_009523.1|WP_011957208.1|3075663_3076275_-|flavin-reductase-family-protein	gnl|CDD|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	2.20391e-34
NC_009523.1|WP_011957205.1|3073293_3073710_+|c-type-cytochrome	gnl|CDD|226005	COG3474, COG3474, Cytochrome c2 [Energy production and conversion].	1.14044e-06
NC_009523.1|WP_011957198.1|3063596_3064457_+|ABC-transporter-permease	gnl|CDD|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	2.01651e-13

Protein sequences

>NC_009523.1|WP_011957198.1|3063596_3064457_+|ABC-transporter-permease
MTTISERRGGVLGRELRGAYAFIERNANLIKRYWAWELVWLAYSIVNALSITFIGRASGEITGVAIAPEQINTFILFLLVGTLVWHYLSVVFDLISESIQWERWEGTIEYTFMAPISRLTHLFGQAAFAVLFAVVHTAIILAVVSAFFRIDLSRADFGAMLVVLIAGSTSFIGLGMFAAILPLLSPEKGLQMTNIIKAMVLLVSGVYYPVSVLPEWLQPLAYISPATYMLDGIRAALLEGASVGTLWSGRVLPLLLTGLLTIPTGLLAFMRAERYAKATGRLKRNG
>NC_009523.1|WP_041335347.1|3062988_3063600_+|GNAT-family-N-acetyltransferase
MPDANQRNGAWRPEVVPGARIFLSVLQREDVPVFARWFSDLELTAYLGQGGMAYTLEQEEEWYARVSRDAGSKTFTIMTRDDRRMIGTVSLMNIDHRRQCAELGIAIGDTSAWGKGYGSEAVRLMCDYGFTFLNLYAIYLWHSGFNRRAHQAYLKAGLREAGRLRCGPLFNGRRYDQVLMEITRDEFGPSGVAHLVQQIESDV
>NC_009523.1|WP_085979449.1|3062055_3062958_+|ribosome-small-subunit-dependent-GTPase-A
MIGRVLRAQSGFFRVETDQGILMCTLRGRLKKERQSTDIAVIGDLVEVTPTMPGHGVIEAVLPRRTKLARRAPASKGVWKEDVLAANIEQALLVFSCASPEFSPRMLDRYLVLIETSDLDAVIVANKVDLVGEAEAHRLFAPYERLEYPVIYTSAVTGYGIDALRERLEGRISVVTGRSGVGKSSLFNAVQPGLGLAVGAISTALNKGRHTTRVAELIPLDLPGGGYLADTPGIRELGLWRFPKDELARCFREFRPYLGDCYFAGCTHIHEPDCAVRAALARGEITPERYDSYVRLFEGE
>NC_009523.1|WP_011957195.1|3061121_3062021_+|ATP-binding-cassette-domain-containing-protein
MAAQTTVALEVRDALKRFGRETTQGQPFWKRSARKPPEMTVAVDHISLSVRRGEIFGLLGANGSGKSTLIRLISTLLIPDSGEIRVFGYDVQREERTVRRLINRVSVEASFFKKLSALENLMYAARLYDLPRAYARQRSITILRSLGLSEKRLYEPLEHMSRGMQQKVAIARGLLTSPVLLLLDEPTTGLDPRSKHDVQRFILRMRAEHDTTVFLTTHDMDEADRLCDRIAIIDNGRIVALDTPQGLKSSLGAGGKNGSATMEDVFMALTGESLDDDFESSDDFESSDGNEATITGDCS
>NC_009523.1|WP_041333620.1|3060867_3061083_+|hypothetical-protein
MLIQERDGTIVRLLAPPGDDRCTIQVEVPLENVEEQATLFDRLIEYAFTTLGARFLEVRVTTGDEEAGAGL
>NC_009523.1|WP_011957194.1|3059314_3060346_+|GNAT-family-N-acetyltransferase
MLHTWRDEGVRVRPRQRPIKGCIGIRIRPFRRTDEEYAAVAAIVARAPAGELCDFEYGHPADLRAFDEGFAPDALPRRYVAVAPDGALVGYAHTFPTTWIAEPGGFWAAVRVVPAYRRRTIGRQLLARALGEAHAAGGVFALSQVREQLADATDFAEQTGFVEMLRSWEMRLDTRTVDVAPLRRYVERVEASGIRLTTLDRLRTVDPDWLPKLHALHLVLNRDVPLPDAPNITREWFERFALTCPEAFFVALDGDRYIGESFMHPDDRQPGLLNQRMTGMLREYRGRGVAMALKVLTIEYAQRCGFTRISTWVESTNTGMLAINERLGFTRHPGLVVYRQDLT
>NC_009523.1|WP_011957193.1|3057864_3058968_-|class-I-SAM-dependent-methyltransferase
MVPYDLYRLLQCPTCGSRDLIVTDGGVACAACSADYPRHDGYIDFMPRGLAFDYVSKYVSEEEELAHELDYRDLAPPLLAAGVRNRTLRRLLDLRPTDIVLDSGCGNAKFAAWNADRVHLMVGVDPATLFADDAVKTVALIQGDARRLPFADCTFDKAFSIDVLEHFPRDVIDAYLAETARVLRPGGRFLVFSNTREPSRLQPLVDASRWLGRQFVRAGVYDFEREARRKSDHVKALATWEDVLDAVQRAGLRPVRVVFWNSVFTSFVEHVLMKLGEAFVGRGRKKGANHAGEASSDLAAPVGEGTAREIRARRRMRAHLQRRGLVYYALLAVTLLMELDLWLFGRLRSGSYFVVVEKPGRAERKER
>NC_009523.1|WP_011957192.1|3056662_3057868_-|GNAT-family-N-acetyltransferase
MTTVDLQYRAVAVDDDQFAFNAALAYNISLDEARRNLRAHAPGDHRGLYRNDRLVTQCILYPLRLANGAGGMIAAGGIGAVATPPEERRRGYVERLLRAVCDELRSQNVPLSMLAAFKESFYRRYGWATFYEARRLSGPPDRFAPFCAHRSGEWVRLDDSVAAATELDAIYRGALRGRFGPLERDALWWQTRVFRSGDASPRWIYVWRDDAGHGRSYVIFSVERGEQGRVVRCRETVALDPQARAQIFAFFAAFADQCAEVVFHAPADAPVQMLMPDPLECTMEPGSMLRIVDVAQALEAYAFPRDVAGRVTLRIADDWLEHNNAVFQLEIEGGVARTTRLNDGINADVRCDIRTLTHIYSRAIRPRTAAAFGLLDIHTRPALALLERLFAGLAPYASDWF
>NC_009523.1|WP_011957191.1|3055622_3056660_-|glycosyltransferase-family-4-protein
MIRPLYISPVGRGGVDFGIQNITHAVRRYGAPRAELLRLPEIYNFIPALIPRGLPRGWWKGFDLIQGRSRVAFALRAPGRPLVTTVHHLTTDPDLQPYSTLAQRLFYRLVESRYDWWSIRSADAVVCVSRYTQQQVARTYGYTNTTIIYDGIDTDVFVPPPDLKRRDDGLPDRGGRIRLLFVGNRTRRKGFDLLPGILDRLPEAYVLYYTSGFQGIDEGPPHPRMVPIGAPDRDGLVAAYQSCDMLLAPSRLEGFGIAQAEALACGRPVVTTRISALPEVVDHDQSGFLCPRDDVDAYAEAVRRLGEDEALRRRFGEHGREKVVRNFGLEQLGRGFLELYDRLLR
>NC_009523.1|WP_011957190.1|3054702_3055482_-|DUF4397-domain-containing-protein
MRSKSWILFLLGALLALTIAPAAFAQAGTAKVRVVHASPDAPAVDVIVNGNKALTNVPFFAASAYLDLPAGSYDIQVVPAGATSPVVIDAKGVRIEAGKAYTIAATGKLAEIKPTILIDNLSAPAAGKAHVRVIHFSPDAPAVDIKVAGGPTLISNLAFPQASNYLPVDAGSYDLQVTPAGGTAVVLDLKGVRLEAGKIYDVFAVGELASIKVETAVTTPPAAPAALPRTGGESSIALIALVAAATLIGAGLVLRRRLA
>NC_009523.1|WP_011957199.1|3064771_3066133_+|GNAT-family-N-acetyltransferase
MPVQSTIDRGDGLVVRWSTAADQERIADLFSHVFRRSADDPPNARMIAYVQHQMSGCHPLIGPNDIALVEDAQRGIVVAATSVMRQRWEYAGVPFTLSRAEPVAAHEEYRNRGLVRATFDLMHARSAERGDLAQCITGIPYFYRQFGYEYAVDLGGSRSVALTMIPDAKEGQPEPFTLRDATIDDLPQIRMLYERERSRNVNGLPILVSTPFDHDHWRWTLSGQTVDAGEGWNTRMIVRPDGQPVGYVLTGRVRWSPDQVRVVGMMVEPGIPLTAVMPPVLRALRTIAPTVPNAPPKTGEPRRLVFSLGAAHPVYEALGRDLIMRTEQPYGWYVRVPDVPLFLRHIRAVLERRLAGSFLAGYTGELNIDFYKSGLRLVFDQGRIAFIEPWRPPVYGDEASAGFPPLVFLQLMFGRRSLEELCAWHDDVWADDEPAMVLNTLFPKQPSWVLPLD
>NC_009523.1|WP_011957200.1|3066178_3067309_-|ABC-transporter-permease
MNRILPIIRKEFIHILRDRRALMIAFLTPVIQMVILGYAATTDVRNVPLAVLDQDRTRQSRALIDAFVQSGQFTVYRYVMSERDLAAQIDSGQARAGLIIPPDYGRTVTAGRDVGVVFVLDGSDPSVASNALSSARLIGVALATRVREETLARRGATTTLMPGVPQVRERVWYNPDMDSAVFMVPGLIGLVLQFQATLLTASAVVRERERGTIEQLIVTPIRPYELMLGKILPYAVIELLVVGEVLLVGTLWFGVPIRGSLILLVAIACLFLVSTLALGLLISTIAHTQFEAFQLSFLTLLPSVFISGFIYPIDAMPAALQLISKIIPLTYFLVVVRGIIIKGVGIEALLPQIAALTIFGAALLTIASLRFRKRLD
>NC_009523.1|WP_011957201.1|3067322_3068558_-|serine-hydrolase
MSDTAASPESVGISSDRLARIRPAMQRWIDRGTIAGASMMIARRGTIVYAEQVGRMSKETDEALRSDAIFRIYSMTKPIVCTALMTLYEEGRFQLITPLATFIPAFANVKVLQQDKEVAPQRPITIGDLMTHLGGFTYDFLIDSPVGELYRQHELMHNAQRTLQQFVDELARLPLAYHPGTKWHYSVSIDVAAHVIEIIADQPLRHFLRERIFDPLGMVDTDFYVPPEKRHRLAAMYGVGDLGARGMTILQMFFNWQQGILERIDPQESYPVDQPETFARGGHGLFSTVQDYMRFALMLLNGGTLDGTRILGRKTLELMHANHIPPALLPWDIAGIAYPGYGFGLGSRVLMDVGLSGMPGTAGEFGWAGAATTYYWVDPAESFAGVFMTQYQGLDEPQRDFRALAYQAIVD
>NC_009523.1|WP_011957203.1|3070057_3070978_+|hypothetical-protein
MEEGLAIEIAPWGRAAGRPPSWTLLRPLKGWRLKIAPWGRAAEGLAIENRAVGACRRAATFVDAAPSAEGLAIEIAPRGRAAGRPPSWTSPCPPWTSPRPLRHMEDAMRRNKLALCLYLVWTTDEQDASAPAPAGARSEARQGRCQSLVREAVKEDSPAPAGARSEARQGRCQSLVREAVKEDSPAPAGARSEARQGRCQSLVREAVKEDSPAPAGARSEARQGRCQSLLLRDSAECKTTSHRLCCFISWTEFPARAHTSVHPFTLSSYVQPATCNGRPTSHVPPATCNLQPSSPLASRLSPLTRQ
>NC_009523.1|WP_011957204.1|3071102_3073289_+|serine-carboxypeptidase
MKKILIIHLGEGEMLLPVTFLDQDVEVRRVGCGGDVARARALIAEYDGAVDAIGLEGMPAVLRLGSAQVQHAIGAELPAVARVTPVVDGSGVRPELERWGVILAERAHPLIFNHKRVLFAPGVNHEGLAQALTRRSSAIRFADPQLFFGLPDAPGVGSAQTLDQAAAPTLEALKEASFETIAGITGAPHHQGSFVWADILAGNIAAIRRFAPERLDRKMVIVESASDEDIADLRARGVETLITLMPSLQGKGEIARYPAATIEALLVALRPDPQAPLTEDTYLDLLADLDWAPAVVTLQPEAAGVNKFAFVIHPLSVRFIHDYPPFYWTRYVPDTIVEAAAAYVPPIYVGKITGGRSPTTGQRIEGYLISLGATPRQMMKHSPRFTYNLLNQAAHLAERLGARIMGLGAFTSVVGDAGITVANEADIAITSGNSLTVAATLETAKIAARMMGYRDLSRGRIMVIGATGSIGSACARLAAQATKDVALVSIEPEKLIDLKRLIERETPGARVVIATHANDLAGECDLIITATSAFGQRVLDVTECKPGAIICDVARPPDINPAEAALRPDVLVIESGEVLIPGDVEIGYDIGLPPKTVYACLAETSLLAMEGRFEDYTLGRNISPERVKEIYRLFRKHGYRLAPLRSFEEYITEEQIMHKRRLAEELRADPELFARRKAEAKERLKSIPEMAKGVRAARRSKHSAAWGWAGVGAVALSLIALRRQARMQ
>NC_009523.1|WP_011957205.1|3073293_3073710_+|c-type-cytochrome
MQPLMRMAIGVALVLGALLLAANTLGNRSGPPASGPVAGDPERGRIVFERAGCSACHAPTTEFRVGTGMAGVLQPEGPVYPPGVDYRGALPNGAPRTEENVAAFIRTTNQGQIGLMPGRALNDQQMADLLAYLRTLRR
>NC_009523.1|WP_011957206.1|3073748_3074810_-|alpha/beta-hydrolase
MSAESPSDNPTPIRRGKGLRLSVTSSHDDAPTSESGDPTLRRGQGLRLSIHDQASAPQPATLLRELLGAPQVVELSHGPLAYRAAGHGPPLVLLHGWAASSRYWLTTLADLSSDFRVYAPDLPGFGDSPALPEPATVARQAQVVTEFADALGLTTFDINGHSYGAAVAASLAAAQPLRVKRLVMTSLGAIGNEIERLIFALARAPLDLSLRVGYPWLNLIAPWVELWRPFATALLCIPPLPQLMAARFIANGLREKWMLQEGIVDLTKMDLRAHLMAVASVGDPQVFDALRSAPQPALLIGGVGDQIMPPDSLQAAAQIMRQARLALIDQCGHIPMIEQPEAYHAALRSFLLE
>NC_009523.1|WP_011957207.1|3074817_3075582_-|ParA-family-protein
MSHVIALAMQKGGVGKTTTALSLGTALAARGRRVLLIDIDPQANLTQGFGVDPSQLEYSVYEVLLNPERGSAFATIRVDEGVDLIPSSLLLAGAELELAGRVGRELLLRKALRTAHETYDYILIDPPPSLGLFSLNALAAAHRVLVPLQLHAYALKAMPQLEQTIDLVREINPDLAIGGILCTLADRRTGLSHEIERQVRERYGSLVFHTVIPMNIKLAEAPTAGMPIHRYAPGSAGAQAYRALADELESRLTH
>NC_009523.1|WP_011957208.1|3075663_3076275_-|flavin-reductase-family-protein
MDFVSFVPETMAPRDAYRLLVSSVVPRPIGWASTIGADGSVNLAPFSFFNAVGGPMPFVMISVSRRAGAIKDTLRNASETGEMVLNIVDEDLAPQMNITSGDWSYGDNEFERAGLAAAPSVDVRPPRVAAAPVAMEVKVTQIVPVEGSSYTMIIGRVVRFHIRRDLLRPDGTIDPLRLRPVARLSGDEYARLGEVFTLERPGA
>NC_009523.1|WP_011957209.1|3076455_3077439_+|FHA-domain-containing-protein
MQPRIYVGHTPDTTDERILLRERALMLANAVRRSPTEGICAIAFNMTVGTESPLTGIDLIVMRTTAVIVGALRTFAGPIDAPPGGVWRDRASGQPILEADGSHPLHRIRVQRDAVQLSLNTAAARLGLDSADPRPFRRVIGAIVGVPAIPADSRISLDVDDHRDHLKVCSFEELPGVAALAHSGLVMSTEIIHTILADLFGCRLWYDDGRLLFELAPPRFQLRITAPGRAPVTAPLYEGETVVGRRQSAQGIERRITLSNDELVSSDHLHIVCHADPASVMIRDTSKNGVWVTPPDGPIEHIRHAERTIPVGTRLRLGMTDIILEHV

Crispr_ID: NC_009523_55

• CRISPR_ID: NC_009523_55
• CRISPR_location: 3070215-3070324
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_55

Consensus_repeat	Method
GGGCGTGCCGCCGGGCGGCCACCTTCGTGGACG	CRISPRCasFinder

spacers of NC_009523_55

>55.1|3070248|44|NC_009523|CRISPRCasFinder
CTGCTCCGTCCGCTGAAGGGCTGGCGATTGAAATCGCGCCGCGC

CRISPR arrays and Neighbor proteins around NC_009523_55

CRISPR arrays

The CRISPR arrays of NC_009523_55

>merge|NC_009523|55|3070215-3070324|CRISPRCasFinder
GGGCGTGCCGCCGGGCGGCCACCTTCGTGGACGCTGCTCCGTCCGCTGAAGGGCTGGCGATTGAAATCGCGCCGCGCGGGCGTGCCGCCGGGCGTCCACCTTCGTGGACG

>NC_009523|55|52|3070215-3070324|CRISPRCasFinder
GGGCGTGCCGCCGGGCGGCCACCTTCGTGGACG	CTGCTCCGTCCGCTGAAGGGCTGGCGATTGAAATCGCGCCGCGC
GGGCGTGCCGCCGGGCGTCCACCTTCGTGGACG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957199.1|3064771_3066133_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379240
NC_009523.1|WP_011957195.1|3061121_3062021_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224054
NC_009523.1|WP_085979449.1|3062055_3062958_+|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl|CDD|234631
NC_009523.1|WP_011957215.1|3080725_3082009_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|376875
NC_009523.1|WP_011957198.1|3063596_3064457_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223912
NC_009523.1|WP_011957193.1|3057864_3058968_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009523.1|WP_011957200.1|3066178_3067309_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|378925
NC_009523.1|WP_041335347.1|3062988_3063600_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NC_009523.1|WP_011957207.1|3074817_3075582_-|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NC_009523.1|WP_011957194.1|3059314_3060346_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|132489
NC_009523.1|WP_041333620.1|3060867_3061083_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957210.1|3077435_3077864_+|EVE-domain-containing-protein	unknown	unknown	gnl|CDD|376640
NC_009523.1|WP_011957204.1|3071102_3073289_+|serine-carboxypeptidase	unknown	unknown	gnl|CDD|227632
NC_009523.1|WP_011957214.1|3080335_3080710_+|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl|CDD|172703
NC_009523.1|WP_011957201.1|3067322_3068558_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009523.1|WP_011957209.1|3076455_3077439_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|379873
NC_009523.1|WP_011957206.1|3073748_3074810_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|184875
NC_009523.1|WP_011957208.1|3075663_3076275_-|flavin-reductase-family-protein	unknown	unknown	gnl|CDD|224766
NC_009523.1|WP_011957213.1|3079880_3080144_+|DUF433-domain-containing-protein	unknown	unknown	gnl|CDD|377269
NC_009523.1|WP_011957205.1|3073293_3073710_+|c-type-cytochrome	unknown	unknown	gnl|CDD|226005

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957199.1|3064771_3066133_+|GNAT-family-N-acetyltransferase	gnl|CDD|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.41062e-10
NC_009523.1|WP_011957195.1|3061121_3062021_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.07543e-85
NC_009523.1|WP_085979449.1|3062055_3062958_+|ribosome-small-subunit-dependent-GTPase-A	gnl|CDD|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	1.81701e-124
NC_009523.1|WP_011957198.1|3063596_3064457_+|ABC-transporter-permease	gnl|CDD|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	2.01651e-13
NC_009523.1|WP_011957193.1|3057864_3058968_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.10377e-18
NC_009523.1|WP_011957200.1|3066178_3067309_-|ABC-transporter-permease	gnl|CDD|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	7.83515e-38
NC_009523.1|WP_041335347.1|3062988_3063600_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	5.19985e-26
NC_009523.1|WP_011957207.1|3074817_3075582_-|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.57671e-73
NC_009523.1|WP_011957194.1|3059314_3060346_+|GNAT-family-N-acetyltransferase	gnl|CDD|132489	TIGR03448, mycothiol_MshD, mycothiol synthase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	4.88087e-11
NC_009523.1|WP_011957209.1|3076455_3077439_+|FHA-domain-containing-protein	gnl|CDD|379873	pfam16697, Yop-YscD_cpl, Inner membrane component of T3SS, cytoplasmic domain. Yop-YscD-cpl is the cytoplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus.	0.00025687
NC_009523.1|WP_011957210.1|3077435_3077864_+|EVE-domain-containing-protein	gnl|CDD|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	1.4421e-52
NC_009523.1|WP_011957204.1|3071102_3073289_+|serine-carboxypeptidase	gnl|CDD|227632	COG5322, COG5322, Predicted dehydrogenase [General function prediction only].	6.07825e-38
NC_009523.1|WP_011957214.1|3080335_3080710_+|fluoride-efflux-transporter-CrcB	gnl|CDD|172703	PRK14215, PRK14215, fluoride efflux transporter CrcB.	9.67009e-55
NC_009523.1|WP_011957201.1|3067322_3068558_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.19389e-51
NC_009523.1|WP_011957215.1|3080725_3082009_+|CBS-domain-containing-protein	gnl|CDD|376875	pfam02641, DUF190, Uncharacterized ACR, COG1993.	2.05635e-42
NC_009523.1|WP_011957206.1|3073748_3074810_-|alpha/beta-hydrolase	gnl|CDD|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	1.15736e-30
NC_009523.1|WP_011957208.1|3075663_3076275_-|flavin-reductase-family-protein	gnl|CDD|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	2.20391e-34
NC_009523.1|WP_011957213.1|3079880_3080144_+|DUF433-domain-containing-protein	gnl|CDD|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	2.14889e-14
NC_009523.1|WP_011957205.1|3073293_3073710_+|c-type-cytochrome	gnl|CDD|226005	COG3474, COG3474, Cytochrome c2 [Energy production and conversion].	1.14044e-06

Protein sequences

>NC_009523.1|WP_011957201.1|3067322_3068558_-|serine-hydrolase
MSDTAASPESVGISSDRLARIRPAMQRWIDRGTIAGASMMIARRGTIVYAEQVGRMSKETDEALRSDAIFRIYSMTKPIVCTALMTLYEEGRFQLITPLATFIPAFANVKVLQQDKEVAPQRPITIGDLMTHLGGFTYDFLIDSPVGELYRQHELMHNAQRTLQQFVDELARLPLAYHPGTKWHYSVSIDVAAHVIEIIADQPLRHFLRERIFDPLGMVDTDFYVPPEKRHRLAAMYGVGDLGARGMTILQMFFNWQQGILERIDPQESYPVDQPETFARGGHGLFSTVQDYMRFALMLLNGGTLDGTRILGRKTLELMHANHIPPALLPWDIAGIAYPGYGFGLGSRVLMDVGLSGMPGTAGEFGWAGAATTYYWVDPAESFAGVFMTQYQGLDEPQRDFRALAYQAIVD
>NC_009523.1|WP_011957200.1|3066178_3067309_-|ABC-transporter-permease
MNRILPIIRKEFIHILRDRRALMIAFLTPVIQMVILGYAATTDVRNVPLAVLDQDRTRQSRALIDAFVQSGQFTVYRYVMSERDLAAQIDSGQARAGLIIPPDYGRTVTAGRDVGVVFVLDGSDPSVASNALSSARLIGVALATRVREETLARRGATTTLMPGVPQVRERVWYNPDMDSAVFMVPGLIGLVLQFQATLLTASAVVRERERGTIEQLIVTPIRPYELMLGKILPYAVIELLVVGEVLLVGTLWFGVPIRGSLILLVAIACLFLVSTLALGLLISTIAHTQFEAFQLSFLTLLPSVFISGFIYPIDAMPAALQLISKIIPLTYFLVVVRGIIIKGVGIEALLPQIAALTIFGAALLTIASLRFRKRLD
>NC_009523.1|WP_011957199.1|3064771_3066133_+|GNAT-family-N-acetyltransferase
MPVQSTIDRGDGLVVRWSTAADQERIADLFSHVFRRSADDPPNARMIAYVQHQMSGCHPLIGPNDIALVEDAQRGIVVAATSVMRQRWEYAGVPFTLSRAEPVAAHEEYRNRGLVRATFDLMHARSAERGDLAQCITGIPYFYRQFGYEYAVDLGGSRSVALTMIPDAKEGQPEPFTLRDATIDDLPQIRMLYERERSRNVNGLPILVSTPFDHDHWRWTLSGQTVDAGEGWNTRMIVRPDGQPVGYVLTGRVRWSPDQVRVVGMMVEPGIPLTAVMPPVLRALRTIAPTVPNAPPKTGEPRRLVFSLGAAHPVYEALGRDLIMRTEQPYGWYVRVPDVPLFLRHIRAVLERRLAGSFLAGYTGELNIDFYKSGLRLVFDQGRIAFIEPWRPPVYGDEASAGFPPLVFLQLMFGRRSLEELCAWHDDVWADDEPAMVLNTLFPKQPSWVLPLD
>NC_009523.1|WP_011957198.1|3063596_3064457_+|ABC-transporter-permease
MTTISERRGGVLGRELRGAYAFIERNANLIKRYWAWELVWLAYSIVNALSITFIGRASGEITGVAIAPEQINTFILFLLVGTLVWHYLSVVFDLISESIQWERWEGTIEYTFMAPISRLTHLFGQAAFAVLFAVVHTAIILAVVSAFFRIDLSRADFGAMLVVLIAGSTSFIGLGMFAAILPLLSPEKGLQMTNIIKAMVLLVSGVYYPVSVLPEWLQPLAYISPATYMLDGIRAALLEGASVGTLWSGRVLPLLLTGLLTIPTGLLAFMRAERYAKATGRLKRNG
>NC_009523.1|WP_041335347.1|3062988_3063600_+|GNAT-family-N-acetyltransferase
MPDANQRNGAWRPEVVPGARIFLSVLQREDVPVFARWFSDLELTAYLGQGGMAYTLEQEEEWYARVSRDAGSKTFTIMTRDDRRMIGTVSLMNIDHRRQCAELGIAIGDTSAWGKGYGSEAVRLMCDYGFTFLNLYAIYLWHSGFNRRAHQAYLKAGLREAGRLRCGPLFNGRRYDQVLMEITRDEFGPSGVAHLVQQIESDV
>NC_009523.1|WP_085979449.1|3062055_3062958_+|ribosome-small-subunit-dependent-GTPase-A
MIGRVLRAQSGFFRVETDQGILMCTLRGRLKKERQSTDIAVIGDLVEVTPTMPGHGVIEAVLPRRTKLARRAPASKGVWKEDVLAANIEQALLVFSCASPEFSPRMLDRYLVLIETSDLDAVIVANKVDLVGEAEAHRLFAPYERLEYPVIYTSAVTGYGIDALRERLEGRISVVTGRSGVGKSSLFNAVQPGLGLAVGAISTALNKGRHTTRVAELIPLDLPGGGYLADTPGIRELGLWRFPKDELARCFREFRPYLGDCYFAGCTHIHEPDCAVRAALARGEITPERYDSYVRLFEGE
>NC_009523.1|WP_011957195.1|3061121_3062021_+|ATP-binding-cassette-domain-containing-protein
MAAQTTVALEVRDALKRFGRETTQGQPFWKRSARKPPEMTVAVDHISLSVRRGEIFGLLGANGSGKSTLIRLISTLLIPDSGEIRVFGYDVQREERTVRRLINRVSVEASFFKKLSALENLMYAARLYDLPRAYARQRSITILRSLGLSEKRLYEPLEHMSRGMQQKVAIARGLLTSPVLLLLDEPTTGLDPRSKHDVQRFILRMRAEHDTTVFLTTHDMDEADRLCDRIAIIDNGRIVALDTPQGLKSSLGAGGKNGSATMEDVFMALTGESLDDDFESSDDFESSDGNEATITGDCS
>NC_009523.1|WP_041333620.1|3060867_3061083_+|hypothetical-protein
MLIQERDGTIVRLLAPPGDDRCTIQVEVPLENVEEQATLFDRLIEYAFTTLGARFLEVRVTTGDEEAGAGL
>NC_009523.1|WP_011957194.1|3059314_3060346_+|GNAT-family-N-acetyltransferase
MLHTWRDEGVRVRPRQRPIKGCIGIRIRPFRRTDEEYAAVAAIVARAPAGELCDFEYGHPADLRAFDEGFAPDALPRRYVAVAPDGALVGYAHTFPTTWIAEPGGFWAAVRVVPAYRRRTIGRQLLARALGEAHAAGGVFALSQVREQLADATDFAEQTGFVEMLRSWEMRLDTRTVDVAPLRRYVERVEASGIRLTTLDRLRTVDPDWLPKLHALHLVLNRDVPLPDAPNITREWFERFALTCPEAFFVALDGDRYIGESFMHPDDRQPGLLNQRMTGMLREYRGRGVAMALKVLTIEYAQRCGFTRISTWVESTNTGMLAINERLGFTRHPGLVVYRQDLT
>NC_009523.1|WP_011957193.1|3057864_3058968_-|class-I-SAM-dependent-methyltransferase
MVPYDLYRLLQCPTCGSRDLIVTDGGVACAACSADYPRHDGYIDFMPRGLAFDYVSKYVSEEEELAHELDYRDLAPPLLAAGVRNRTLRRLLDLRPTDIVLDSGCGNAKFAAWNADRVHLMVGVDPATLFADDAVKTVALIQGDARRLPFADCTFDKAFSIDVLEHFPRDVIDAYLAETARVLRPGGRFLVFSNTREPSRLQPLVDASRWLGRQFVRAGVYDFEREARRKSDHVKALATWEDVLDAVQRAGLRPVRVVFWNSVFTSFVEHVLMKLGEAFVGRGRKKGANHAGEASSDLAAPVGEGTAREIRARRRMRAHLQRRGLVYYALLAVTLLMELDLWLFGRLRSGSYFVVVEKPGRAERKER
>NC_009523.1|WP_011957204.1|3071102_3073289_+|serine-carboxypeptidase
MKKILIIHLGEGEMLLPVTFLDQDVEVRRVGCGGDVARARALIAEYDGAVDAIGLEGMPAVLRLGSAQVQHAIGAELPAVARVTPVVDGSGVRPELERWGVILAERAHPLIFNHKRVLFAPGVNHEGLAQALTRRSSAIRFADPQLFFGLPDAPGVGSAQTLDQAAAPTLEALKEASFETIAGITGAPHHQGSFVWADILAGNIAAIRRFAPERLDRKMVIVESASDEDIADLRARGVETLITLMPSLQGKGEIARYPAATIEALLVALRPDPQAPLTEDTYLDLLADLDWAPAVVTLQPEAAGVNKFAFVIHPLSVRFIHDYPPFYWTRYVPDTIVEAAAAYVPPIYVGKITGGRSPTTGQRIEGYLISLGATPRQMMKHSPRFTYNLLNQAAHLAERLGARIMGLGAFTSVVGDAGITVANEADIAITSGNSLTVAATLETAKIAARMMGYRDLSRGRIMVIGATGSIGSACARLAAQATKDVALVSIEPEKLIDLKRLIERETPGARVVIATHANDLAGECDLIITATSAFGQRVLDVTECKPGAIICDVARPPDINPAEAALRPDVLVIESGEVLIPGDVEIGYDIGLPPKTVYACLAETSLLAMEGRFEDYTLGRNISPERVKEIYRLFRKHGYRLAPLRSFEEYITEEQIMHKRRLAEELRADPELFARRKAEAKERLKSIPEMAKGVRAARRSKHSAAWGWAGVGAVALSLIALRRQARMQ
>NC_009523.1|WP_011957205.1|3073293_3073710_+|c-type-cytochrome
MQPLMRMAIGVALVLGALLLAANTLGNRSGPPASGPVAGDPERGRIVFERAGCSACHAPTTEFRVGTGMAGVLQPEGPVYPPGVDYRGALPNGAPRTEENVAAFIRTTNQGQIGLMPGRALNDQQMADLLAYLRTLRR
>NC_009523.1|WP_011957206.1|3073748_3074810_-|alpha/beta-hydrolase
MSAESPSDNPTPIRRGKGLRLSVTSSHDDAPTSESGDPTLRRGQGLRLSIHDQASAPQPATLLRELLGAPQVVELSHGPLAYRAAGHGPPLVLLHGWAASSRYWLTTLADLSSDFRVYAPDLPGFGDSPALPEPATVARQAQVVTEFADALGLTTFDINGHSYGAAVAASLAAAQPLRVKRLVMTSLGAIGNEIERLIFALARAPLDLSLRVGYPWLNLIAPWVELWRPFATALLCIPPLPQLMAARFIANGLREKWMLQEGIVDLTKMDLRAHLMAVASVGDPQVFDALRSAPQPALLIGGVGDQIMPPDSLQAAAQIMRQARLALIDQCGHIPMIEQPEAYHAALRSFLLE
>NC_009523.1|WP_011957207.1|3074817_3075582_-|ParA-family-protein
MSHVIALAMQKGGVGKTTTALSLGTALAARGRRVLLIDIDPQANLTQGFGVDPSQLEYSVYEVLLNPERGSAFATIRVDEGVDLIPSSLLLAGAELELAGRVGRELLLRKALRTAHETYDYILIDPPPSLGLFSLNALAAAHRVLVPLQLHAYALKAMPQLEQTIDLVREINPDLAIGGILCTLADRRTGLSHEIERQVRERYGSLVFHTVIPMNIKLAEAPTAGMPIHRYAPGSAGAQAYRALADELESRLTH
>NC_009523.1|WP_011957208.1|3075663_3076275_-|flavin-reductase-family-protein
MDFVSFVPETMAPRDAYRLLVSSVVPRPIGWASTIGADGSVNLAPFSFFNAVGGPMPFVMISVSRRAGAIKDTLRNASETGEMVLNIVDEDLAPQMNITSGDWSYGDNEFERAGLAAAPSVDVRPPRVAAAPVAMEVKVTQIVPVEGSSYTMIIGRVVRFHIRRDLLRPDGTIDPLRLRPVARLSGDEYARLGEVFTLERPGA
>NC_009523.1|WP_011957209.1|3076455_3077439_+|FHA-domain-containing-protein
MQPRIYVGHTPDTTDERILLRERALMLANAVRRSPTEGICAIAFNMTVGTESPLTGIDLIVMRTTAVIVGALRTFAGPIDAPPGGVWRDRASGQPILEADGSHPLHRIRVQRDAVQLSLNTAAARLGLDSADPRPFRRVIGAIVGVPAIPADSRISLDVDDHRDHLKVCSFEELPGVAALAHSGLVMSTEIIHTILADLFGCRLWYDDGRLLFELAPPRFQLRITAPGRAPVTAPLYEGETVVGRRQSAQGIERRITLSNDELVSSDHLHIVCHADPASVMIRDTSKNGVWVTPPDGPIEHIRHAERTIPVGTRLRLGMTDIILEHV
>NC_009523.1|WP_011957210.1|3077435_3077864_+|EVE-domain-containing-protein
MSKRFWLLKTEPDCYAWSDLERDGRTVWDGVANNVALKYLREMQPGDEALIYHTGDERCAVGRAEVISAPYPDPQHNDPRMVVVDIRPLAPLPRPVSLTAIKADPAFADFALVRQSRLSVVPVTEAHWRRLLAMAGMESDAG
>NC_009523.1|WP_011957213.1|3079880_3080144_+|DUF433-domain-containing-protein
MKLDRITINPARMNGQPSIRDLRLTVRRVIELLALYPDRDDLRREYPELEDEDIRQALLYAAACLDDRIVESPVTYEVDPSASIAAH
>NC_009523.1|WP_011957214.1|3080335_3080710_+|fluoride-efflux-transporter-CrcB
MNIIAIAVGAAIGANLRYSLSIWAAQRWGASFPYGTLIVNVIGSFAIGFVLVLATTRLSLSDTARLLIVTGLLGGFTTFSSLSFETYTLVTSGSWMAAGLYVLSSFGLGIAGVFLGAGVARVLP
>NC_009523.1|WP_011957215.1|3080725_3082009_+|CBS-domain-containing-protein
MDLSGNAQQVWIFLGESDQWHGRPLSLALLELLKRNGIAGGTVLRGIAGYGAHSFIHTASLVELSSDLPIVVTFVDRPDRIARVMPDILEMVREGLITTTPVEVIKYTSRAIGPFPAHLTVADVMTRQVVSVRPDTPVAEIVALLIDRALRSAPVVDAENRVIGIITDGDLLTRGATELPLALQRELSLAERAATIETLATHRHTAADLMTPNPVTLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLLATVAEGLRQRPATPIRQPDGAPKTVGEIMITDVPTVQPDTPLAETLDRLLETDKRRVIVVDGERRVVGIITDGDVMRRAAKRVRPGALRALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPTNAPIADAVRLMMAHKIKRIPIIDADGRLVGMVGRAGVLAALSRG

Crispr_ID: NC_009523_56

• CRISPR_ID: NC_009523_56
• CRISPR_location: 3124842-3124988
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009523_56

Consensus_repeat	Method
GCCCGCGCAGGCGGGCTTCGCCTTG	CRISPRCasFinder

spacers of NC_009523_56

>56.1|3124867|29|NC_009523|CRISPRCasFinder
GATAGGCGATAGGCGATAGGCTCACTGCA
>56.2|3124921|43|NC_009523|CRISPRCasFinder
CATAGCCGAGGGCTGATGGTCTTTGAGTAATTATTCCGCTCTC

CRISPR arrays and Neighbor proteins around NC_009523_56

CRISPR arrays

The CRISPR arrays of NC_009523_56

>merge|NC_009523|56|3124842-3124988|CRISPRCasFinder
TGACGCGCAGGCGGGCTTCGCCCTGGATAGGCGATAGGCGATAGGCTCACTGCAGCCCGCGCAGGCGGGCTTCGCCTTGCATAGCCGAGGGCTGATGGTCTTTGAGTAATTATTCCGCTCTCGCCCGCGCAGGCGGGCTTCGCCTTG

>NC_009523|56|53|3124842-3124988|CRISPRCasFinder
TGACGCGCAGGCGGGCTTCGCCCTG	GATAGGCGATAGGCGATAGGCTCACTGCA
GCCCGCGCAGGCGGGCTTCGCCTTG	CATAGCCGAGGGCTGATGGTCTTTGAGTAATTATTCCGCTCTC
GCCCGCGCAGGCGGGCTTCGCCTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957253.1|3128422_3128773_+|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236
NC_009523.1|WP_011957239.1|3112648_3113563_+|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl|CDD|224513
NC_009523.1|WP_011957244.1|3117818_3118478_+|endonuclease-III	unknown	unknown	gnl|CDD|223255
NC_009523.1|WP_011957259.1|3134438_3137348_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|350769
NC_009523.1|WP_157041310.1|3112285_3112465_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_083763370.1|3126462_3126747_+|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|224583
NC_009523.1|WP_011957257.1|3130190_3130346_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333648.1|3128772_3129219_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957242.1|3115952_3117173_+|tryptophan-synthase-subunit-beta	unknown	unknown	gnl|CDD|235288
NC_009523.1|WP_011957246.1|3119096_3122849_-|magnesium-chelatase-subunit-H	unknown	unknown	gnl|CDD|273933
NC_009523.1|WP_011957258.1|3130710_3134442_-|N-6-DNA-methylase	unknown	unknown	gnl|CDD|380293
NC_009523.1|WP_041333640.1|3117480_3117822_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957252.1|3128111_3128426_+|nucleotidyltransferase	unknown	unknown	gnl|CDD|224583
NC_009523.1|WP_041333644.1|3127667_3128060_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957245.1|3118592_3119015_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957256.1|3129786_3129999_+|DUF2283-domain-containing-protein	unknown	unknown	gnl|CDD|378367
NC_009523.1|WP_011957248.1|3123255_3124704_-|glycosyltransferase	unknown	unknown	gnl|CDD|340861
NC_009523.1|WP_083763298.1|3113568_3114546_-|DMT-family-transporter	unknown	unknown	gnl|CDD|273359
NC_009523.1|WP_011957241.1|3114573_3115932_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238742
NC_009523.1|WP_011957249.1|3125128_3126268_-|N-methyl-L-tryptophan-oxidase	unknown	unknown	gnl|CDD|236887

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957253.1|3128422_3128773_+|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	1.04859e-43
NC_009523.1|WP_011957239.1|3112648_3113563_+|diacylglycerol-kinase-family-lipid-kinase	gnl|CDD|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	1.18958e-64
NC_009523.1|WP_011957256.1|3129786_3129999_+|DUF2283-domain-containing-protein	gnl|CDD|378367	pfam10049, DUF2283, Protein of unknown function (DUF2283). Members of this family of hypothetical bacterial proteins have no known function.	0.000118229
NC_009523.1|WP_011957259.1|3134438_3137348_-|DEAD/DEAH-box-helicase	gnl|CDD|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.31666e-62
NC_009523.1|WP_083763370.1|3126462_3126747_+|nucleotidyltransferase-family-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.34003e-29
NC_009523.1|WP_011957258.1|3130710_3134442_-|N-6-DNA-methylase	gnl|CDD|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	4.03759e-09
NC_009523.1|WP_011957242.1|3115952_3117173_+|tryptophan-synthase-subunit-beta	gnl|CDD|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NC_009523.1|WP_011957246.1|3119096_3122849_-|magnesium-chelatase-subunit-H	gnl|CDD|273933	TIGR02025, Magnesium-chelatase_subunit_H, magnesium chelatase, H subunit. This model represents the H subunit of the magnesium chelatase complex responsible for magnesium insertion into the protoporphyrin IX ring in the biosynthesis of both chlorophyll and bacteriochlorophyll. In chlorophyll-utilizing species, this gene is known as ChlH, while in bacteriochlorophyll-utilizing spoecies it is called BchH. Subunit H is the largest (~140kDa) of the three subunits (the others being BchD/ChlD and BchI/ChlI), and is known to bind protoporphyrin IX. Subunit H is homologous to the CobN subunit of cobaltochelatase and by anology with that enzyme, subunit H is believed to also bind the magnesium ion which is inserted into the ring. In conjunction with the hydrolysis of ATP by subunits I and D, a conformation change is believed to happen in subunit H causing the magnesium ion insertion into the distorted protoporphyrin ring. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	0
NC_009523.1|WP_011957252.1|3128111_3128426_+|nucleotidyltransferase	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.89414e-30
NC_009523.1|WP_011957244.1|3117818_3118478_+|endonuclease-III	gnl|CDD|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	6.06763e-94
NC_009523.1|WP_011957248.1|3123255_3124704_-|glycosyltransferase	gnl|CDD|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.98869e-90
NC_009523.1|WP_083763298.1|3113568_3114546_-|DMT-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.56687e-11
NC_009523.1|WP_011957241.1|3114573_3115932_+|VWA-domain-containing-protein	gnl|CDD|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	1.72639e-27
NC_009523.1|WP_011957249.1|3125128_3126268_-|N-methyl-L-tryptophan-oxidase	gnl|CDD|236887	PRK11259, solA, N-methyl-L-tryptophan oxidase.	0

Protein sequences

>NC_009523.1|WP_011957248.1|3123255_3124704_-|glycosyltransferase
MKHRVLILSTSAGSGHKSAAAALEKVFQRSPQVEELVNLDALERTNELYRAFYSDLYLRLVQERPQLVGWWYQASDEPWKTDTFRLLFDRINADPLTRFIREFRPTITVCTHFMPAGIVAQLLAEDAIDTRLAIVTTDYDFHSMWLSPRFNRYFVALEETKVHLMALGLPEDRITISGIPVDPAFEAPINRDEVLAHYHLRPDLPMILVSAGAAGIGPARDVVQQIMTMKTPSQVIVVCGRNEELRKELIELTEPQAKRFRLLGFTDDMPSLMKIATILIGKPGGLTSSEAMAAGLPMVIISPIPGQEERNSDHLLEEGVALRCNQMTTLAYKVDRLLQNPERLARMRENTRNIGRPDAARVIVDTLLHEVNEPVVIEESPPIRILPFRINLADLFDPPLADDDRFTIVDALSGELIDEVTGKEMRVLFDNLEIESTTDADFYINRDTLALLADRGASPHLIDVLQRALGNRDECDIRWRRQ
>NC_009523.1|WP_011957246.1|3119096_3122849_-|magnesium-chelatase-subunit-H
MRTLTFILGMERFNAHIWEEVEQNLRQSGVEVRLLRFHDGHVERRDPALAEAIAQADVLFITLINMRDQAQWLKEQIDRAGTPTVFAFESMPEVMALTRVGEYRVQNGGRASMPKPMQAVLRLMTRGREEDTLYAYTKLTKLTAKLLPLMPPKLKDFRTWLSVNIYWNQPDPYNLTQMVRLILRDCLGQRLDVAPVRIIPMMGCFHPATDELFPNPDAYLKWYRKQRDPKRRRGAANPADAPLVAILTFRKHIVQRQQYVADLIEALEAQGMAVLPIVVSGIEMHVAVREWVARQKVDLIINTMGFPIIGGPAGSTKPGQHRETAINLLAGIDVPYMIIQPLQMQEIEHWHTHGVAPMQAVIMYDLPEMDGSTASVALGAIHEQRIVATPDRLARAARLVTGWVRLRRKANAEKRVALVIYNFPPGLGKLGTAALLDVPATLHAILQRLAAEGYRVEGVPATVEELARQIAALDVADEPQTLASTRTVVPLAEYHAIVPAPHAERIDRKWGSPPGEIAPHGRDAIRLDTLSFGNVIVAVQPPMGVPGDPMRLLFDRDFTPHHQYVAFYRWLTQRWRADAIVHVGMHGTAEWMPGLQLGLTENCWPDLLLGDAPHLYLYPLNNPAEAAIARRRGYATIISHLTPPYARAGLYRQLAILRAEMEQYEARSNDYDAHTLYERLPFLSSQFPDLAPLPGEAADAFLRRVRRYLDDVEQRLILDGLHIFGKAPAPDRAAALIEAALDVSREGRLGLASALRGVGVPETQIAQARADFVRRFIIERQTLHLDEWLSTFGRPADVGVLFDPQFYIDYGRAMLDGLLQAPGELDALIHALDGGYVHPAPGADPVRAGVAALPSGRNIHSIDPWRLPSDAALVRGQQMAERLLEQHLQHSSNGAYPQMIALTLWALDTIKTEGESIGAVLALVGARPERDGQGKIWRYDLIPLEELRRPRIDVLLDVSAIFRDTFQISLDLLDDLFRRAAEADEPPERNFVRAHALEQQARGLSWEQATARIFTQAPGRYGTGVDELVEEGQWQNTHDLADMYVRRNGYAYGGGRGGQEAAEALRGLLGAVDHVFQAIDSVEYGLTDMQHYYGHSGAIRLAAGRERGGDVPLSYAETHTGVVRIGSADQFIRLEARTKLLNPRWYEAMLQHGYAGAAEIGNRFTYLLGWSATTGAVEKWVYDQMAETFVLDEAMRERLAQANPRAARNAVARLLESHGRGLWQADDETIERLQMIYADLEDRLEGVTFP
>NC_009523.1|WP_011957245.1|3118592_3119015_+|hypothetical-protein
MYIRWIVRKHKNAGAANVSFHDAYLVESYRDENDSPRQRTICYLGNIRQIGDEFPPLEREIFFLRAERILMSIPEIDSEEREAILALLRQKVPELSEEEAIIAFHNNLRWFARWIRSRGRRVSRDELLRMIDTAAESIEV
>NC_009523.1|WP_011957244.1|3117818_3118478_+|endonuclease-III
MTGFDIHAAMAILRAEMPRFPKPLIDGMGEEEARNPFRILIATILSLRTKDTMTAVVAPRLFAAADTPEKMLALGEDEIAALIYPVGFYRNKARTIRTICQILIDQYGGEVPADLDALLALPGVGRKTANLVLTAGFDLPGICVDTHVHRICNRWGYVQTRTPEETEMRLREILPPEYWKEINGLLVTLGQNICHPTSPRCSVCPLAHLCARIGVERRR
>NC_009523.1|WP_041333640.1|3117480_3117822_+|hypothetical-protein
MVEKQATVGPVQVGVVLLALATAIIHIVLALPTNLIMFYLNGAGYIGLTAALYLPQLAVYRRRLRWALIGYTAITIVGWAVVGERSLIAYLDKLIEVALIGLLAIEVRQEGER
>NC_009523.1|WP_011957242.1|3115952_3117173_+|tryptophan-synthase-subunit-beta
MTSSVHQDPTIDTVRSGRFGPYGGAYIPETLATSVTALEQAYAAARQDPAFWAELDRLHRSYTGRPTPLTFARRLTEYLGGAQIYLKREDLAHTGAHKINNALGQGLLAKRMGKRRIIAETGAGQHGVATATVCALLGMECVVYMGVDDMARQQPNVFRMRLLGAEVRGVASGSRTLKDAINEAMRDWVTNPDSYYLLGSALGPHPYPTMVRDFQSIIGREAREQILAATGRLPDVVLACVGGGSNAIGIFSAFIADEGVELRGVEAGGRGTTLGDHAARFSGGRPGVLQGTYTYVLQNDDGQIGLTHSISAGLDYAAVGPEHALLHDQGRATYTTADDEEALDAFQTLARLEGIIPALESAHAVAEAIKIAPAMRPDQIILINLSGRGDKDIFTVARALGVEVGG
>NC_009523.1|WP_011957241.1|3114573_3115932_+|VWA-domain-containing-protein
MDSMPTLTLSTSPGPLILEARCEPQVCYVLLTVRAAATGDAGVRPVNWALVADASRSMRIPIVDETQFRSLLRNGSAQETLVDGVPVWQLSGSVPQEVRKAASSALDHVVHALHTVVERLDRNDRLSLVVFADHALLLIPGMVGSDRVTLVRAIERLPGLDLGDGTNLADGIALALNQIRANRDARRANRVLLLTDGFTRDPAACLTLADQAADEHIAITTIGLGGEFQDDLLTGIADRSGGNALFLKRASAIPRAISAELESARAAALPGVDIAIAPMRGVMLRRVTRTRPVLAILAEPTGTGASDVVSVLLGDLPAGSPVTLLLEFLVPAANPGPLWIAGVAARSAGVRLAEADIRATIAHGAPPLSDDVRAAAARAMAARLMRRAIAASDSIEAARLMRAAAARFDELGEPALAAAAREQAATIERNGRAASIVTRELIYATRRLGDAS
>NC_009523.1|WP_083763298.1|3113568_3114546_-|DMT-family-transporter
MIGKGASVSESSVLEQATERPVTRLARALPYLVLFGGVMVAAAAAIMIRYAQAMEMPSITIAAGRLGLAAIILLPIAWSRAGNELRRLSRRDLLLGVASGVFLAVHFAAWISSLAYTSVASSVALVSTNPLWVALLSALLLRERPSLLTMAGVVLTIAGSILIGISDSAGPDSGNALLGNLLALLGALGGSIYFLVGRSLRRHVSVLAYIWLVYTSAAVVLLLMALVFAGTANPLTLFGGYPPLAYLLLLGLAVGPQLLGHTAFNWSLRYLSATFVTVALLGEPIGSAVLALILFGEWFAPLQLAGFVILLAGIAVAARGERGDQ
>NC_009523.1|WP_011957239.1|3112648_3113563_+|diacylglycerol-kinase-family-lipid-kinase
MGKALIILNPWAGRGLAGERRHDLDLALERAGVDYDMVMTHTRGGAIEMARQAIERGYSSVVAVGGDGTLNEAVNGIKSAEAAGGRRVPLGIIPLGTGCDFIKALDGFVPNDIYGSVQRIVRGQTRTVDLGLVRVDNEQERWFINALGTGFDAQAAAEALKITRVKGFAVYLLAIIRAMANYKAHPMTVEFDGRRVQRRLLFASIANGRYQAGGFLLTPDAHIDDGYFDACLVDNLRIDEIIRHIPKVLEGTHTKLRQVTMARVRHVAISSSAPIPVATDGEVLSVRARSVTAELIPAAIDILA
>NC_009523.1|WP_157041310.1|3112285_3112465_-|hypothetical-protein
MDRKGGTMTNEDLLALIEEGVENGRISPALAAFITAELLGVEAAETEYAEDRLMETTSA
>NC_009523.1|WP_011957249.1|3125128_3126268_-|N-methyl-L-tryptophan-oxidase
MTPAYDVIIIGLGGMGSAAAYHAARRGRRVLGIERHTIAHTLGSSHGRSRIIRQAYFEDPAYVPLLLRAYELWRQIERDSGAHLLTITGGLMIGSPESHTVAGALRSAQEHGLEYELLDAATIRRRFPPLRPPEGTVALYEHQAGFVRPETSVAAHLRRAVALGADLRFEEPALAWEADAGGVTVTTTRNRYTAERLIVAPGPWAPRLLADLGAPLVVERQTLHWFAPKGGVEPFLPDRFPIYIWEAEDGTQFYGFPHQEGPPGGVKVALFRAGEPCDPDTVDRAVHPAEIAAMRAAIAHLIPTLNGKHLASAVCMYTTTPDQHFVVGLHSQHPNVVIASPCSGHGFKFASVMGEILTDLALDGATRHPIRLFDPQRFH
>NC_009523.1|WP_083763370.1|3126462_3126747_+|nucleotidyltransferase-family-protein
MEPIIQQLQNILPQLREEYDVERLGVFGSYVRNEQHAESDIDILVSFRSTPGLLKYISLEQYLSDLSGMRVDLVMESALKPEIGARIRTEVHYL
>NC_009523.1|WP_041333644.1|3127667_3128060_+|hypothetical-protein
MRHFGKNRSVDNRRTRRLRDPTLHFFVVWLLAPIFAIVGASLDRAVWDLSATLVGWLITLSLWSGFGIRSVVYQWKALPRSPRKRWPDLSRITAIELNLLTGIGLVTLVSSIAALMVCGLLIVGIANRRI
>NC_009523.1|WP_011957252.1|3128111_3128426_+|nucleotidyltransferase
MATIVRRPPPIEPIIQQLQNILPQLREEYDVEWLGVFGSYVRNEQHAESDIDILVSFRSTPGLLKYISLEQYLSDLLGMRVDLVMESALKPEIGARIRTEVHYL
>NC_009523.1|WP_011957253.1|3128422_3128773_+|DUF86-domain-containing-protein
MTSERSYSDYLSDIIDAMEKIGRFIEGLSEKQFQEDDKTAFAVIRALEIIGEATKCLPDTFRSAYPQIPWKAMAGMRDKLIHQYMGVDLRVVWKTATEDIPALLPQIQHIYRTMKP
>NC_009523.1|WP_041333648.1|3128772_3129219_+|hypothetical-protein
MSRLPLYSRSALHRRDYCGARLFASRQPAWGETNMRLLRDPTLHFFVVWLLAPIFAIVGASLDRAAWDLSATLVGWLITFSLWSGFGIRSVVYQWKALPRSPRKRWPDLSRTTAIELHLLTGTGLVTLVSSIAALIVCGLLIIDIASV
>NC_009523.1|WP_011957256.1|3129786_3129999_+|DUF2283-domain-containing-protein
MAEVKVFYDRAGNTLTVWFGDPLDEHVCEETGNEVILIKDQSGQVIGFERLNFSVAALEPLRVAFETVTV
>NC_009523.1|WP_011957257.1|3130190_3130346_+|hypothetical-protein
MQEWLFLALVNHQNGFIWRYFYRHPGVLRAHIEMYGGATVYLPLVLRAGEA
>NC_009523.1|WP_011957258.1|3130710_3134442_-|N-6-DNA-methylase
MSHIHAPTPAIRLEGGLLGPDILDAALAGDLPGQQPRDFGLDGSRSLTDEIAGAFADAQAQWALFRRRLARLPDDDPATAITRDAWVIPFLSLLGYDLHANPHPYAIDGARFAISHRAGAADDAPPVHIVGVRQDLGRVPPAPSRTGGVRMAPHVLVQEYLNRSEQVWGLVANGRTLRLLRNSTYLRRQAYVECDLAQILDEQRFADFAALYRLIHRTRLPQTAADARDCWLERYHQHALEQGGRVRDRLRDGVEQALLILANGFLAHPANGALRAALRLPPPGEPVPDDVAAALYRQALRIVYRVLFLLTAEDRGLISDDPHYAHYGVGRLRRLLTRRSAFTDHVDLWLGFQTLRQIVSDAALAALLGAAPLNGDLFAPVDLDAAVITNRDLLHAFRHLAWYGDPPRRINYAALDTEELGSVYESLLELHPTIAWRGAVPVVAFAARSAERRATGSHYTPPELVAPLVQHALEPALRARLAPCPTPAEREAALLGLTVLDPACGSGHFLLAAARHLGTELARIRSGDAAPAPEIVRDAVRDVIAHCLYGVDKNPLAVELCRVALWLEGHARGRPLTFLDHRIRCGDSLLGVADLQALEAGIPDDAYRPLGTDDRAHARQVKARNAREARMDLFRHGFVTAPLADLAAQMHQVAAMPDRTVEQVHAKSAAYRRVITQDAYRRLRLACDVWTAAFFQSFAPPQSPPPTPHARGGGMGVVGVALTTMAVQEALTHGALSDPRQGAFVTVTRDERAFFHWSLEFPDAAAAGGFDVILGNPPFMGGLRISGVAGEAYRRWLEAALVPFGGTADLCAAFFRRAFALLRPGGRLGMIATNTIGQGDTRESGLKVILAQGGRIAFARRFVRWPGQASVEVNLVVIEAPRARRTQEGTGGDGGALLDDHPVAAISSRLDAEPDGEPARLRQNDGKAFIGDFVRGLGFVLEAAEAEALLARDPRNADCLFPYLNGDDLNTHPAQQPGRWVICFHDWDLARAQQYPDLLRIVEERVKPEREGLRGPGDARNRAAWWQFGAYRAGMRHAIAPLRRVLARSRISEMHAPVFVPKGWIYNEQLVVFAFDDDYHFALLQSGVHEAWARRQASSLRTDLRYTPTDCFATFPFPPAEDAAPDLARVLAHPAFAHAAQIGAAYHERRREVMQARRIGLTKTYNLLHDPACLDADIADLRRLHAALDAAILACYGWDDLDPGHDFHANARGQTRFGMAPAVQRAVVQRLLDLNLAVATGRV
>NC_009523.1|WP_011957259.1|3134438_3137348_-|DEAD/DEAH-box-helicase
MTNPGSIVRFRQRLWALLPSASPDHVTLRPLTGSDDETLTLYRRLIDLIGYTLPSERITPAAFPPPDADHVADAASAHLLWQAARLSLREGATPFRSLGRISIRPRTYQFVPLLMALRLDPVRLFIADDVGVGKTIEALLVARELLDRGEIGRFCVLCPPALCEQWSKELAEKFNLDAVIVRSGTVSQLERQVPPGATIYESFPVQVISIDFVKTERNRHQFLQFCPDLVIVDEAHGAAAAQGRGQQERHALVQDVARKPRRHLILLTATPHSGIEEAFRSLLGLVRPEFADWRLDALSDAQRSELARHFVQRTRRDIEQGWEAITCFPQREPQDETYELSDGYRRLFERTYQFCFEIVQTGEHLDARRRRVRSWGALSLLRCVMSSPAAAVATLASRGALVFDSDEEADFRPFVFEVTEERATDESPTPPLEATVETLPDADRRRLRDLARLARDLYGSEHDAKLRRAVELTRHLIDEGFHPILWCRYVATAEYVADQVQRDLPDGVQVACVTGRMGDEERQARIAELDADRPRVLVATDCLSEGVNLQSLFTAVVHYDLPWNPNRLEQREGRVDRYGQPAPRVRVIRFFGRDNPVDGAVLDVLLNKARTIHRTLGTYVPVPEESESVTQAVLEALFLRGRRTPGAQLTLDLGIPAVEELHRRWDRDVDRERVNRTRFAQRALKPEEVQRELEATDAVLGDPSAVRDFVLETAQRLNLPITPDPRRADVFRVSLAPDVLRALPDAIRMELPDSSSSAARRANPFWSISFISPTPEGAEYVGRNHRFVMALAQFLFEEALERSETAIARRCGAIRTHAVQETTTILLLRVRYMLEYPNAQPVLSEEVLALGYRDHGSEMHWLDHGEALSLLASARPAANMPLEEKQTILRQALARIGEWRPVQGGRWGDDHPIQSGIRQWIDRRAADLTEAHKRIRQAVALRVRGLEMTPQFPPDLLGVVVLERANTRL

Crispr_ID: NC_009523_57

• CRISPR_ID: NC_009523_57
• CRISPR_location: 3143451-3143560
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: WYL

Consensus repeat of NC_009523_57

Consensus_repeat	Method
GGTGAGGGGCAACAGCGCAACGTTAACGTACCCGCACCC	CRISPRCasFinder

spacers of NC_009523_57

>57.1|3143490|32|NC_009523|CRISPRCasFinder
GGGTCGCTTGGATCAAGCGCGCTGAGCGTAAC

CRISPR arrays and Neighbor proteins around NC_009523_57

CRISPR arrays

The CRISPR arrays of NC_009523_57

>merge|NC_009523|57|3143451-3143560|CRISPRCasFinder
GGTGAGGGGCAACAGCGCAACGTTAACGTACCCGCACCCGGGTCGCTTGGATCAAGCGCGCTGAGCGTAACGGTGAGGGGCAACAGCGCAACGTTAACGTACCCGCACCC

>NC_009523|57|54|3143451-3143560|CRISPRCasFinder
GGTGAGGGGCAACAGCGCAACGTTAACGTACCCGCACCC	GGGTCGCTTGGATCAAGCGCGCTGAGCGTAAC
GGTGAGGGGCAACAGCGCAACGTTAACGTACCCGCACCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041333652.1|3138604_3139036_-|IS200/IS605-family-transposase	unknown	unknown	gnl|CDD|376616
NC_009523.1|WP_011957265.1|3147485_3148643_+|thiolase-family-protein	unknown	unknown	gnl|CDD|238383
NC_009523.1|WP_011957264.1|3146546_3147473_+|branched-chain-amino-acid-transaminase	unknown	unknown	gnl|CDD|235841
NC_009523.1|WP_049767518.1|3140174_3140627_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957259.1|3134438_3137348_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|350769
NC_009523.1|WP_157041081.1|3139580_3139817_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957272.1|3165344_3166094_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl|CDD|133471
NC_009523.1|WP_011957266.1|3149426_3151457_-|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009523.1|WP_011957263.1|3145960_3146377_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957258.1|3130710_3134442_-|N-6-DNA-methylase	unknown	unknown	gnl|CDD|380293
NC_009523.1|WP_049767519.1|3140595_3140973_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957261.1|3141119_3142961_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NC_009523.1|WP_011957269.1|3161293_3162640_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349930
NC_009523.1|WP_011957257.1|3130190_3130346_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957270.1|3162820_3163879_+|PHP-domain-containing-protein	unknown	unknown	gnl|CDD|213993
NC_009523.1|WP_011957268.1|3160187_3161291_-|glycosyltransferase	unknown	unknown	gnl|CDD|340826
NC_009523.1|WP_049767517.1|3139785_3140178_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041080.1|3139254_3139569_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957267.1|3158391_3159645_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041082.1|3145688_3145997_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011957266.1|3149426_3151457_-|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	5.8e-19	63.4	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_041333652.1|3138604_3139036_-|IS200/IS605-family-transposase	gnl|CDD|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	3.37536e-33
NC_009523.1|WP_011957261.1|3141119_3142961_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.0133e-95
NC_009523.1|WP_011957265.1|3147485_3148643_+|thiolase-family-protein	gnl|CDD|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	0
NC_009523.1|WP_011957264.1|3146546_3147473_+|branched-chain-amino-acid-transaminase	gnl|CDD|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	3.83169e-166
NC_009523.1|WP_011957270.1|3162820_3163879_+|PHP-domain-containing-protein	gnl|CDD|213993	cd07438, PHP_HisPPase_AMP, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase (HisPPase) AMP bound. The PHP domain of this HisPPase family has an unknown function. It has a second domain inserted in the middle that binds adenosine 5-monophosphate (AMP). The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to give histidinol. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to the other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	7.06397e-14
NC_009523.1|WP_011957259.1|3134438_3137348_-|DEAD/DEAH-box-helicase	gnl|CDD|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.31666e-62
NC_009523.1|WP_011957268.1|3160187_3161291_-|glycosyltransferase	gnl|CDD|340826	cd03795, GT4_WfcD-like, Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	1.46223e-130
NC_009523.1|WP_011957266.1|3149426_3151457_-|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.30192e-11
NC_009523.1|WP_011957272.1|3165344_3166094_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl|CDD|133471	cd01416, SAICAR_synt_Ade5, Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. Eukaryotic group of SAICAR synthetases represented by the Drosophila melanogaster, N-terminal, SAICAR synthetase domain of bifunctional Ade5. The Ade5 gene product (CAIR-SAICARs) catalyzes the sixth and seventh steps of the de novo biosynthesis of purine nucleotides (also reported as seventh and eighth steps). SAICAR synthetase converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.	8.78864e-145
NC_009523.1|WP_011957269.1|3161293_3162640_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|349930	cd05681, M20_dipept_Sso-CP2, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine. This family includes Sso-CP2 from Sulfolobus solfataricus.	0
NC_009523.1|WP_011957258.1|3130710_3134442_-|N-6-DNA-methylase	gnl|CDD|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	4.03759e-09

Protein sequences

>NC_009523.1|WP_011957261.1|3141119_3142961_-|ABC-transporter-ATP-binding-protein
MLRTSVHTIYFALQLVWRTNWRAVVALAVVILLESPILAFQLWIGKLIIDAIVAAIGGTPISLTLIFGLVAAEGGLKILSILFQQINLVVQKRLNDQLSEKINGDILDRVNQLDLRFFETAEYYDSLARAQQEALYRPTEILLYSVQMLQSLLTLVALIVILLQFNPIIFIALFIGAFVSIFGQSRLAAWEFSVLDHQIPETRKLAYLSSLLTTSGATKEIRIFGLGNLFRTEYLNLLRKHNEEKRNVAHHRARIGLLSGTIGALIFAGVYLYLITAALRRDLSVGDLTMLTSTFFQSQIYLSSLIGTTAALYQAGLFLNHLERFMSFSPGIVSPSEPQPIVHPLERGLDLINVWFTYPEAKDPVLRNINLIIQPGEIVAIVGENGAGKTTLIKLLCRLYDPTQGVIMLNGVDIKSYDLDQLRRQYSVIFQDFVNYQATVRENIGYGYIPSLSDPELAEIKKAAERSGIHSFIQDLPRGYDTLVGKLFEEGHELSGGQWQMLAVARALVRPATVVILDEPTASLSPASEVAFFHHLKRSLSKDQIGIIISHRFSTVRMADRIIVLENGEIRENGRHEDLMAQQGIYARLYRLQAASLEEGASSLSLCSEVQNS
>NC_009523.1|WP_049767519.1|3140595_3140973_-|hypothetical-protein
MRGEGLAIEIAPCGRAAEGLAIEIAPRGRAAGRPPSWTPPRLLRGWRLEIAPRGRFAEGLAIGNRAVRAYRRASTFVDASLCAAGLAIDIAPCGRVAEGLAIEIAPRGRAAEGLAIGNRAARAFC
>NC_009523.1|WP_049767518.1|3140174_3140627_-|hypothetical-protein
MEIAPRGRSAEGLAIEIAPRGRAAGRPPSWTPPRLLRGWRLKIAPCGRVAEGLAIDIAPRGRAAGRPPSWTPPRLLRGWRLTSRRAGVPLKGWRLTSRRAGVPPGVHLRGRFPVRCGAGDRKSRRAGVPLKGWRLEIAPRGCAAGGGAGD
>NC_009523.1|WP_049767517.1|3139785_3140178_-|hypothetical-protein
MTSRRAGVSLKGWRLEIAPRGRAAGRPPSWTLLCALRGWRLEIAPRGRAAEGLAIDIAPRGRAAGRPPSWTLPCALRGWRLEIAPCGRVAEGLAIGNRAARACRRASTFVDAALCAAGLAIGNRAVRAFC
>NC_009523.1|WP_157041081.1|3139580_3139817_-|hypothetical-protein
MEIAPCGRSAEGLAIGNRAARVCRRASTFVDASLCAAGLAIDIAPCGRVAEGLAIEIAPRGRAAEGLAIGNRAARAFC
>NC_009523.1|WP_157041080.1|3139254_3139569_-|hypothetical-protein
MKSRRAGVPPGVHLRGRFPVRCGAGDRKSRRAGVPLKGWRLEIAPRGRSAEGLAIDIAPCGRVAEGLAIGNRAARACRRASTFVDAALCAAGLAIGNCAARACR
>NC_009523.1|WP_041333652.1|3138604_3139036_-|IS200/IS605-family-transposase
MRRNKLALFLHLVWATWDRLPLITPDIERRLYRNIESEARKQGCTVLALNGTEDHVHLLVIFPTTITIADLLKHVKGVSSRFVNETLRPSAQFKWQGSYGAFTVSRWDVARIKEYIKRQKEHHRSGELVPEFEETFEEIKSDE
>NC_009523.1|WP_011957259.1|3134438_3137348_-|DEAD/DEAH-box-helicase
MTNPGSIVRFRQRLWALLPSASPDHVTLRPLTGSDDETLTLYRRLIDLIGYTLPSERITPAAFPPPDADHVADAASAHLLWQAARLSLREGATPFRSLGRISIRPRTYQFVPLLMALRLDPVRLFIADDVGVGKTIEALLVARELLDRGEIGRFCVLCPPALCEQWSKELAEKFNLDAVIVRSGTVSQLERQVPPGATIYESFPVQVISIDFVKTERNRHQFLQFCPDLVIVDEAHGAAAAQGRGQQERHALVQDVARKPRRHLILLTATPHSGIEEAFRSLLGLVRPEFADWRLDALSDAQRSELARHFVQRTRRDIEQGWEAITCFPQREPQDETYELSDGYRRLFERTYQFCFEIVQTGEHLDARRRRVRSWGALSLLRCVMSSPAAAVATLASRGALVFDSDEEADFRPFVFEVTEERATDESPTPPLEATVETLPDADRRRLRDLARLARDLYGSEHDAKLRRAVELTRHLIDEGFHPILWCRYVATAEYVADQVQRDLPDGVQVACVTGRMGDEERQARIAELDADRPRVLVATDCLSEGVNLQSLFTAVVHYDLPWNPNRLEQREGRVDRYGQPAPRVRVIRFFGRDNPVDGAVLDVLLNKARTIHRTLGTYVPVPEESESVTQAVLEALFLRGRRTPGAQLTLDLGIPAVEELHRRWDRDVDRERVNRTRFAQRALKPEEVQRELEATDAVLGDPSAVRDFVLETAQRLNLPITPDPRRADVFRVSLAPDVLRALPDAIRMELPDSSSSAARRANPFWSISFISPTPEGAEYVGRNHRFVMALAQFLFEEALERSETAIARRCGAIRTHAVQETTTILLLRVRYMLEYPNAQPVLSEEVLALGYRDHGSEMHWLDHGEALSLLASARPAANMPLEEKQTILRQALARIGEWRPVQGGRWGDDHPIQSGIRQWIDRRAADLTEAHKRIRQAVALRVRGLEMTPQFPPDLLGVVVLERANTRL
>NC_009523.1|WP_011957258.1|3130710_3134442_-|N-6-DNA-methylase
MSHIHAPTPAIRLEGGLLGPDILDAALAGDLPGQQPRDFGLDGSRSLTDEIAGAFADAQAQWALFRRRLARLPDDDPATAITRDAWVIPFLSLLGYDLHANPHPYAIDGARFAISHRAGAADDAPPVHIVGVRQDLGRVPPAPSRTGGVRMAPHVLVQEYLNRSEQVWGLVANGRTLRLLRNSTYLRRQAYVECDLAQILDEQRFADFAALYRLIHRTRLPQTAADARDCWLERYHQHALEQGGRVRDRLRDGVEQALLILANGFLAHPANGALRAALRLPPPGEPVPDDVAAALYRQALRIVYRVLFLLTAEDRGLISDDPHYAHYGVGRLRRLLTRRSAFTDHVDLWLGFQTLRQIVSDAALAALLGAAPLNGDLFAPVDLDAAVITNRDLLHAFRHLAWYGDPPRRINYAALDTEELGSVYESLLELHPTIAWRGAVPVVAFAARSAERRATGSHYTPPELVAPLVQHALEPALRARLAPCPTPAEREAALLGLTVLDPACGSGHFLLAAARHLGTELARIRSGDAAPAPEIVRDAVRDVIAHCLYGVDKNPLAVELCRVALWLEGHARGRPLTFLDHRIRCGDSLLGVADLQALEAGIPDDAYRPLGTDDRAHARQVKARNAREARMDLFRHGFVTAPLADLAAQMHQVAAMPDRTVEQVHAKSAAYRRVITQDAYRRLRLACDVWTAAFFQSFAPPQSPPPTPHARGGGMGVVGVALTTMAVQEALTHGALSDPRQGAFVTVTRDERAFFHWSLEFPDAAAAGGFDVILGNPPFMGGLRISGVAGEAYRRWLEAALVPFGGTADLCAAFFRRAFALLRPGGRLGMIATNTIGQGDTRESGLKVILAQGGRIAFARRFVRWPGQASVEVNLVVIEAPRARRTQEGTGGDGGALLDDHPVAAISSRLDAEPDGEPARLRQNDGKAFIGDFVRGLGFVLEAAEAEALLARDPRNADCLFPYLNGDDLNTHPAQQPGRWVICFHDWDLARAQQYPDLLRIVEERVKPEREGLRGPGDARNRAAWWQFGAYRAGMRHAIAPLRRVLARSRISEMHAPVFVPKGWIYNEQLVVFAFDDDYHFALLQSGVHEAWARRQASSLRTDLRYTPTDCFATFPFPPAEDAAPDLARVLAHPAFAHAAQIGAAYHERRREVMQARRIGLTKTYNLLHDPACLDADIADLRRLHAALDAAILACYGWDDLDPGHDFHANARGQTRFGMAPAVQRAVVQRLLDLNLAVATGRV
>NC_009523.1|WP_011957257.1|3130190_3130346_+|hypothetical-protein
MQEWLFLALVNHQNGFIWRYFYRHPGVLRAHIEMYGGATVYLPLVLRAGEA
>NC_009523.1|WP_157041082.1|3145688_3145997_-|hypothetical-protein
MGRTGSFFGALLTTLASLPLWIGYFNFGMQMSAWCLLPLALTVGLAAVDELAQRRTAAWRAALLAAIILASIPVAYYPALVVAVPLIAATGAARLLEIRHYP
>NC_009523.1|WP_011957263.1|3145960_3146377_-|hypothetical-protein
MPLLIELTIIVASAALLCIYVGWGVARLALPPSLMPFRAPLTPLVGYATVLWVGFILASLALNLRWTLVVLLAGATMLNVLAWRAEGRPRPLTWLRAQPEALIPPLLALLTGILPLLSYGYLTIIGRWGEQDRSSAHC
>NC_009523.1|WP_011957264.1|3146546_3147473_+|branched-chain-amino-acid-transaminase
MSANRFAFFNGEFVPIEQAQVSVMTAALNYGLGVFEGIRAYWNADDAQLYVFHLREHMERLKRSCAIMFMELPYSVDDLCNLTIELLRREGFREDAYIRPLVFKSDHTIAVRLNNMTDAFALYAVPFGQYIPGSAVRACVSSWRRIEDNIMPSRAKVSGGYVNSALAKTEALLNGYDEAIVLGSDGQVSEASAANLYIVRHGALVTPPITSDILEGITRRVVAELAQAELGVQVIERPIDRTELYVAEEAFFCGTGAEVKPIIEIDRRPVGNGEVGSITARLVELYSTVVRGQAPTYRAWCTPVYAQQ
>NC_009523.1|WP_011957265.1|3147485_3148643_+|thiolase-family-protein
MPEALIIDAVRTPIGKRGKALRDMHPVDLLGQHIAALLARTGVDPAAIDDVIAGCVSQSGEQSANIARNAWLAAGLPESVPATTIDRQCGSSLQAIHFAAQGVMAGVYDLVIAAGVESMTRVPIGASIMVGPGTPLSPGLATRYGLERGWFDQARGAEWMAREWRFTREDLDRYSLRSHRLAAEARAAGRFTAEIIPVSLTDGTHFEADEGIRPDTSADQLAALKPAFPDLELITAGNASQISDGAAATLIASPSAAQALGLRPQARFVSFAVVGVDPVTMLTGPIPATRRVLERAGLHVNDIDLFEVNEAFAPVVLAWQKEIGAPWERVNVNGGAIALGHPLGATGARIMATLLHELERRGGRYGLIAICEGGGMANATIIERV
>NC_009523.1|WP_011957266.1|3149426_3151457_-|WYL-domain-containing-protein
MNRWSRWLAAAPAVAQRLIARTHRISLPRAGSADERLRRLRRALCTPAAVRAVYATLDADVRAALADLRRCRRGLDAATFTARYGAVRPWRQLARDPQPRSVAERLLLLGWLLPRPAAPGRAPRFALAPEVRRWLPQPLRLADDGPAPPAPLPLAQRAALALLLVAAAAPLPLRRDGALRRGALRRLQPLLPDAPAPELEALCRFLLPLLEARGLVQRHGGQCTTAPGAAAFLAAPLDDQRARLVEAWLHSAAPDAWLRRLRVADSGLDAPALRRRLVQWAQALPPDRLLAPEATYDALAATFGPLADAHTHGFRVVRRPPWRRRSEARVWQAALRGPLAWLGVVAWHDGRVVRPTTWALADGAWRYGAPGEVTAPFGALDAAALTLAQGGRWVRGDAGGLTVQVAAARGVLGAQVRELLARRAGDAPDGWGTPTDEAPALRLAEGALLLADAPGDLEQALRGRSVRRYAQRLAPGVALVRAEHVAAVTRALARQGIAVAVAAGSGAAAGGALPAAPLAPGECAALLAACAYARRYAPEGLPLVIPATLEARLWQGLTPPLRAAVEAALAGIEAPEGPAADGGTDAAPLPPADPDAALRTVQRALTQQRLVTIAYDTGGEGRVTQRTVRPLALERRGDQWLLHAYCLQRRAERTFRLDRVRGCALAPPAGRWAPAG
>NC_009523.1|WP_011957267.1|3158391_3159645_+|hypothetical-protein
MSRTSTERLLQQQIQTLFPRLSRHRRRALARWVLGALLAGSANRPALAPALATAGIARAATLADAWDAWIAAPAHLINTADPPAAGAPPVVRPLACGADLLRWIRAHWTGGPLVLGLDASHRRDDVVLLRMSVLYRGTALPVAWVIVPANQPGAWEPHWERMLRWARSALPRDQEVLTLADQGLWSPRLWHAIRSQQFHPIMRVRTTSTFAPTGQARQSVLRLAPGPGHGWVGVGVAFTHAPKRIAGTLAVAWGADHAEPWAPLVERSAARVDAAWYALRSWDEAGFRQSTSMGWDWQRGQVTDPDAVAWQYLVVATVTLWTVAVGTRIDDAEPQGVPPGRLRRAPPTTGAPPRRRWSGTAQRVISLLRRGAGRRLRWLLAQGRCWVRLWLRPEPLPKIGDSVTMHIYDPSQCLKSP
>NC_009523.1|WP_011957268.1|3160187_3161291_-|glycosyltransferase
MHILHIYKDYPPVLGGIEGHVRDLAEGLVARGYQATVLVTSTDRGTSIERPSPGLTVIRAARMLHLASTPLSPAMIALARGIRADIVHLQFPYPPGDLAALAAPGSPPLVISYQSDIVRQKTLLRLYRPLLALTLRRAARIITSSPGYIASSPFLRPYAAKCEVVPIGVDVTRFTPNDRRANAVPRLLFVGRLRYYKGLHFLIEALRQVEGAELWIAGNGPERTRLERQVADAGLGDRVRFLGDVADEDLPALYRQADIFVLPSHLRAEAFGIVLVEALASGLPCISTALGTGTDFVNVHNETGLVVPPGDATALAEAIRRLRDDPALRARYGQAAVHRARTLFSRERMLDAVERVYRQVVRERGQA
>NC_009523.1|WP_011957269.1|3161293_3162640_-|M20/M25/M40-family-metallo-hydrolase
MNRFDAHIEENKGRYFDELCTLLRQPSIAAQGIGIEETAMLVAQRLERLGAQVEIFRMPGAAPVVYGSIGDGARTLLVYDHYDVQPPEPLDLWHSPPFEPTLRDGKLYARGVADNKGNLMLRIQAIESWLATQGDLPCRINFLVEGEEEIGSVNLESFCQSHPELLRADGCLWETGGVNALEQPTIACGAKGICYVELVVRGAAYDLHSANATMVPNPAWRLVWALATLKAPDERVLIPGFYDRVRPPSEADMAALARIPLDDDALLADFGIPQFLGGLRGIERLKAHLFNPTCTICGLFAGYTGEGSKTVLPSEARAKIDFRLVPDMDPADVVTALRQHLDAHGFDDIAIIEYGHEKPGRSDPDSHIVRAMTTAIRVTYHKEPVIYPTMAGTGPVYPVCTAVGTPMASGCGTGYQGSQVHAPDENIRLDDYWTAMRCMGAFIQAFAA
>NC_009523.1|WP_011957270.1|3162820_3163879_+|PHP-domain-containing-protein
MYHYPGALHMHTRFSDGSGSVEDLARAACDAGLRWIIITDHDDLQAKQYEGWLHDVLVIVGHEITPPRNHFLALGIDRVIDNRLPPQTFIDQVYDAGGFGIIAHPDERVKNSFKDIYRWDDWGIDGPRHRNGRTVGIELWNLMSDWGEHLTPRNKELIYFFPRLGISGPTPETLAWWDRLNMAGRRTFGVGGVDAHAFIRQTFWGKVEVFPYRWMFGTLTNYVILPERLPLDPAAAIHTILDALANGRSYFVNRLDGDCPDLTFHAVRGAERWHPGDTASLHGGPLTFVADVGCDAEVHLIHDGRILARGLRILRHSVILPGVYRLEAYRRGMPWLYTNPVYVTGKRREGMR
>NC_009523.1|WP_011957272.1|3165344_3166094_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MNLGEKLAEGKTKIVYAHPTDPTLAIIVHKDGISAGDGARRHTIPGKGALSGRTTANVFTMLNRAGVATHFVAAPEPSVMVVYRCAMIPLEVVNRRIATGSYIRRNPDVAEGTRFDPPLLEFFLKDDARHDPQMTPDEIIAQGIASADEVEQMASESRRVFLLIEEAWAAQDVVLCDLKIEFGRDTSGRLLVADVIDNDSWRIWPGGVKERMLDKQVYRNMPVVTDEGLEQVRRLYEEVAQRTDAWVNQ

Crispr_ID: NC_009523_58

• CRISPR_ID: NC_009523_58
• CRISPR_location: 3151615-3158052
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 86 spacers
• Cas_protein_info: WYL

Consensus repeat of NC_009523_58

Consensus_repeat	Method
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	PILER-CR
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	CRISPRCasFinder
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	CRT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	PILER-CR

spacers of NC_009523_58

>58.1|3151650|38|NC_009523|PILER-CR
GCACGGGGGCGGGGTCTACCCCGCCCGATCCAATCTGG
>58.2|3151723|40|NC_009523|PILER-CR
GCCTGGAGGGACGGGTCGTTTGCCAGGATGTTCCTAAGGC
>58.3|3151798|37|NC_009523|PILER-CR
GCTTCGCACCACGCCCGCCACACGGCGGCGATTCCGG
>58.4|3151870|39|NC_009523|PILER-CR
GCTCAGTGTTGGCTCCGGACCAAACTGCGGACTGTGCGT
>58.5|3151944|40|NC_009523|PILER-CR
GCCGCGCTCGCTGTCCTCGCCGCATGGCGGGAAGCAGCGG
>58.6|3152019|39|NC_009523|PILER-CR
GACGAGCTCACTCTCGGAGATGCTCCGCGCGATCTCGGT
>58.7|3152093|41|NC_009523|PILER-CR
GTGACCTGGCGCCGCCGGACGCGGCGGGTGCGGCGGACGCC
>58.8|3152169|37|NC_009523|PILER-CR
GTTTGGTTCGCACTCGTAACCCGGATATGGATCATAC
>58.9|3152241|39|NC_009523|PILER-CR
GTCCTGCGACGTCAGCGACAGCGCGACGCCCAGCGCCTG
>58.10|3152315|40|NC_009523|PILER-CR
GTTCAGCGCCTCCGCGTCTCCCTCGACCTTCTTCAGCTGA
>58.11|3152390|40|NC_009523|PILER-CR
GAGCGCCTCAATCAACGTGCTCTCGTCGACAACCTGCGGA
>58.12|3152465|40|NC_009523|PILER-CR
GACCTCCTTCTTGTTCATTTAGAAGTGCAAGCCAGAGCGA
>58.13|3152540|40|NC_009523|PILER-CR
ACCCGCCCGTCTCCGCGACCAGGCGCTGCGCCTGGTCGCG
>58.14|3152615|40|NC_009523|PILER-CR
ACTCGTCGGAGACCGCGGCCAGTTCTTTCCGAATGCGTTC
>58.15|3152690|40|NC_009523|PILER-CR
ACATTAACGTTCGGTCCCATTCCATATATACGGTCCGTGG
>58.16|3152765|39|NC_009523|PILER-CR
ACAACACTAAAGTGGAGGGAGGCGTATAAGTGACTACGC
>58.17|3152839|39|NC_009523|PILER-CR
ACCCGCATCCGACTCGCACTTGGCTAACTTCGCCTGAAG
>58.18|3152913|38|NC_009523|PILER-CR
ACGATACCGGTCCGTCATGTTTCTCCTCCTTTGCCCGC
>58.19|3152986|39|NC_009523|PILER-CR
ACGAACGACCCGGCGCTCGGCGTCGCGCGCGCGCCTCTC
>58.20|3153060|38|NC_009523|PILER-CR
ACGCGACGCCGAGCGCCGGGCCGCGCGGCTTGGCGCGG
>58.21|3153133|39|NC_009523|PILER-CR
ACAGCGGACCGCGCCGCGGTAGACCTCCACGGCGTCATC
>58.22|3153207|39|NC_009523|PILER-CR
ACAAGACGACGAGGAAGATAGCAGCCACCAGGCATCCTT
>58.23|3153281|38|NC_009523|PILER-CR
ACCAACTCGCGCCGCCGCTTCACGCTGCGCGCGCTCCG
>58.24|3151652|36|NC_009523|CRISPRCasFinder
ACGGGGGCGGGGTCTACCCCGCCCGATCCAATCTGG
>58.25|3151725|38|NC_009523|CRISPRCasFinder
CTGGAGGGACGGGTCGTTTGCCAGGATGTTCCTAAGGC
>58.26|3151800|35|NC_009523|CRISPRCasFinder
TTCGCACCACGCCCGCCACACGGCGGCGATTCCGG
>58.27|3151872|37|NC_009523|CRISPRCasFinder
TCAGTGTTGGCTCCGGACCAAACTGCGGACTGTGCGT
>58.28|3151946|38|NC_009523|CRISPRCasFinder
CGCGCTCGCTGTCCTCGCCGCATGGCGGGAAGCAGCGG
>58.29|3152021|37|NC_009523|CRISPRCasFinder
CGAGCTCACTCTCGGAGATGCTCCGCGCGATCTCGGT
>58.30|3152095|39|NC_009523|CRISPRCasFinder
GACCTGGCGCCGCCGGACGCGGCGGGTGCGGCGGACGCC
>58.31|3152171|35|NC_009523|CRISPRCasFinder
TTGGTTCGCACTCGTAACCCGGATATGGATCATAC
>58.32|3152243|37|NC_009523|CRISPRCasFinder
CCTGCGACGTCAGCGACAGCGCGACGCCCAGCGCCTG
>58.33|3152317|38|NC_009523|CRISPRCasFinder
TCAGCGCCTCCGCGTCTCCCTCGACCTTCTTCAGCTGA
>58.34|3152392|38|NC_009523|CRISPRCasFinder
GCGCCTCAATCAACGTGCTCTCGTCGACAACCTGCGGA
>58.35|3152467|38|NC_009523|CRISPRCasFinder
CCTCCTTCTTGTTCATTTAGAAGTGCAAGCCAGAGCGA
>58.36|3152542|38|NC_009523|CRISPRCasFinder
CCGCCCGTCTCCGCGACCAGGCGCTGCGCCTGGTCGCG
>58.37|3152617|38|NC_009523|CRISPRCasFinder
TCGTCGGAGACCGCGGCCAGTTCTTTCCGAATGCGTTC
>58.38|3152692|38|NC_009523|CRISPRCasFinder
ATTAACGTTCGGTCCCATTCCATATATACGGTCCGTGG
>58.39|3152767|37|NC_009523|CRISPRCasFinder
AACACTAAAGTGGAGGGAGGCGTATAAGTGACTACGC
>58.40|3152841|37|NC_009523|CRISPRCasFinder
CCGCATCCGACTCGCACTTGGCTAACTTCGCCTGAAG
>58.41|3152915|36|NC_009523|CRISPRCasFinder
GATACCGGTCCGTCATGTTTCTCCTCCTTTGCCCGC
>58.42|3152988|37|NC_009523|CRISPRCasFinder
GAACGACCCGGCGCTCGGCGTCGCGCGCGCGCCTCTC
>58.43|3153062|36|NC_009523|CRISPRCasFinder
GCGACGCCGAGCGCCGGGCCGCGCGGCTTGGCGCGG
>58.44|3153135|37|NC_009523|CRISPRCasFinder
AGCGGACCGCGCCGCGGTAGACCTCCACGGCGTCATC
>58.45|3153209|37|NC_009523|CRISPRCasFinder
AAGACGACGAGGAAGATAGCAGCCACCAGGCATCCTT
>58.46|3153283|36|NC_009523|CRISPRCasFinder
CAACTCGCGCCGCCGCTTCACGCTGCGCGCGCTCCG
>58.47|3153356|37|NC_009523|CRISPRCasFinder
ACAACGTTGCAGCGTTCCTCGGCGAGGTCGGCTCCGA
>58.48|3153430|37|NC_009523|CRISPRCasFinder
CGGACCCCCCAGGCGAGGGACAACCTCACGCCCTGCA
>58.49|3153504|41|NC_009523|CRISPRCasFinder
GTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
>58.50|3153582|39|NC_009523|CRISPRCasFinder
ACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
>58.51|3153658|35|NC_009523|CRISPRCasFinder
AAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
>58.52|3153730|38|NC_009523|CRISPRCasFinder
TTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
>58.53|3153805|37|NC_009523|CRISPRCasFinder
AGGCACGCCGTGCGGCGGCGCCAGTCTTGTCCAGCTG
>58.54|3153879|40|NC_009523|CRISPRCasFinder
AACTAGCCAAGGCGGAATTTGATGCCGAGGCGCTGCTGAA
>58.55|3153956|36|NC_009523|CRISPRCasFinder
AGGGGGTCCCCCCCCACAGCGTTTCGCAGCCGCTCG
>58.56|3154029|38|NC_009523|CRISPRCasFinder
TTTCGCAGCCGCTCGATGATCGCCTCCGCCTCCGTGAG
>58.57|3154104|38|NC_009523|CRISPRCasFinder
GATATGGATCTATTTTTTGGAGGTACGCGGCGTAGCAT
>58.58|3154179|35|NC_009523|CRISPRCasFinder
TTCGCCCGCGCTTCCGCCTCGGCCCGAGCGGCCGC
>58.59|3154251|37|NC_009523|CRISPRCasFinder
TTCTTTGCCCCGAAACCCCGCCCGCCTTCGGCAGACG
>58.60|3154325|37|NC_009523|CRISPRCasFinder
TTTCTTCCGCCTTCTTCTCTTCCGCCTTCTTGTTCTT
>58.61|3154399|40|NC_009523|CRISPRCasFinder
GCTTCCTGCTGCGCCCGTTGCTCTGCCTCCGCGCGGGAGA
>58.62|3154476|38|NC_009523|CRISPRCasFinder
CTGCCTCCGCGCGGGCCGCCGCTTCCTGCTGCGCGCGC
>58.63|3154551|37|NC_009523|CRISPRCasFinder
TTTTCTCCTCCTTGCCCCCCCGCCGTGCGGCGGGATG
>58.64|3154625|38|NC_009523|CRISPRCasFinder
TAAACTCATCTGGCGTACCCAGAGTCGAGTGAGTGCGA
>58.65|3154700|38|NC_009523|CRISPRCasFinder
GCTGCCAGTCGGTTCCACTGTCTGGTAACCGTCTTCCA
>58.66|3154775|35|NC_009523|CRISPRCasFinder
CTTCTCGCTTTGGATGACGACCTTAATCCTCCCTC
>58.67|3154847|39|NC_009523|CRISPRCasFinder
CTGCTCCTCCGCAACCGCACGGGCTCCCGCCTCCGCCCA
>58.68|3154923|41|NC_009523|CRISPRCasFinder
GTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
>58.69|3155001|39|NC_009523|CRISPRCasFinder
ACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
>58.70|3155077|35|NC_009523|CRISPRCasFinder
AAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
>58.71|3155149|38|NC_009523|CRISPRCasFinder
TTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
>58.72|3155224|38|NC_009523|CRISPRCasFinder
TCCGCCTCCTCCACGAGCGTCCACGCCGGGCGCGCCTC
>58.73|3155299|36|NC_009523|CRISPRCasFinder
GCGAGGGGGAGATCGGGCCGCGCAGCGGGCGCAGAT
>58.74|3155372|37|NC_009523|CRISPRCasFinder
GCGTCGTCCTCCTCGCCCCGCAGCCGGTCGAGGAGGT
>58.75|3155446|38|NC_009523|CRISPRCasFinder
CTGCAGCAGCAGGGGGGGCGGGATCACGAATGATCCCA
>58.76|3155521|36|NC_009523|CRISPRCasFinder
CAGACGATATCCTCGTCCGCGCCGGCGACCGCGCGC
>58.77|3155594|37|NC_009523|CRISPRCasFinder
GTCGCCAGACGCTGCTGGCGCTCGATGCGACCTGGAC
>58.78|3155668|39|NC_009523|CRISPRCasFinder
CCTGTTTTGTTGCAGGTACGCCTGTGTATACAGCAAATG
>58.79|3155744|37|NC_009523|CRISPRCasFinder
TAGCTCACGATTGTACATTTAGAGTGCATCGCCAAAG
>58.80|3155818|37|NC_009523|CRISPRCasFinder
ATAGTCACAACTAGGCTAAGGCACCCTTCAAGCGCAA
>58.81|3155892|35|NC_009523|CRISPRCasFinder
CTGGTGGGGTTAATCGACCGGGATCCGGAGCGCAG
>58.82|3155964|37|NC_009523|CRISPRCasFinder
ACCGCCGCCCTTCGCACTCGTAACCCGTACGTGTAAC
>58.83|3156038|38|NC_009523|CRISPRCasFinder
CGGCTTCCCGCGCCGCCTCCGCGCGCCACGCCCGCCAC
>58.84|3156113|39|NC_009523|CRISPRCasFinder
AACGCGCCCCCGGCGGCGCCGGGAGCGGGGGAGGGACAA
>58.85|3156189|41|NC_009523|CRISPRCasFinder
TCCTTGCCCCCCCGCCGTGCGGCGAGGCGGGCATTCAACAT
>58.86|3156267|35|NC_009523|CRISPRCasFinder
ACGATGTCGCGGGAGGACCTCGCCCGATCCAGATT
>58.87|3156339|37|NC_009523|CRISPRCasFinder
CTCCCGGACCCCCTCTCCCGATGCCGCAGCATCATTG
>58.88|3156413|39|NC_009523|CRISPRCasFinder
ACGGCGAGGCGCGCCGCGGACCCGCCGGCGCGCGCCGGA
>58.89|3156489|38|NC_009523|CRISPRCasFinder
CTGCGAGACGGCGTCTCTCAGCACAACTAAGGCGTTCC
>58.90|3156564|35|NC_009523|CRISPRCasFinder
TCGACGAGCGTGCGCTCGTCGACACGCTTCACGAT
>58.91|3156636|36|NC_009523|CRISPRCasFinder
GCGCCTGCGCCTCCGCATGCGCCCGCCATACGGCGA
>58.92|3156709|38|NC_009523|CRISPRCasFinder
TCGCAGACGGCGTGCCAGAGGTCATCGTTGAGCGCCAG
>58.93|3156784|35|NC_009523|CRISPRCasFinder
AAGATCTCCTCGATGTCGTCCATACTCCCTCCTTT
>58.94|3156856|39|NC_009523|CRISPRCasFinder
ACGGCGAGCGCTGCGACAACCAGCGCCGTCGTCGAGAGA
>58.95|3156932|38|NC_009523|CRISPRCasFinder
TGGTGGTCCTCCTTGCTGCCCCCCGCCTTGCGGCGAGC
>58.96|3157007|38|NC_009523|CRISPRCasFinder
GAGATGATGACTCCGACTTCCATGTGGTGGTCCTCCTT
>58.97|3157082|34|NC_009523|CRISPRCasFinder
ACGGGTCGTTTTCCAACACGTGCCGCAGGCGCTG
>58.98|3157153|37|NC_009523|CRISPRCasFinder
GTCTCCGGCGCTGCCGCCGCCGCCGCCGCCGCGTCCG
>58.99|3157227|38|NC_009523|CRISPRCasFinder
TAGACGAAGTGCCTTGAGGGGAAAAGGAGCAAAGTCAA
>58.100|3157302|38|NC_009523|CRISPRCasFinder
AACTATCCGTCCAACTTACTAACTCACCAACAGCCTTA
>58.101|3157377|38|NC_009523|CRISPRCasFinder
ATTAGCATAAAAATAACCGCTGCTAACGCAGCCAGCAA
>58.102|3157452|37|NC_009523|CRISPRCasFinder
ATCTAATATAAGGATAGCGTCGTCTAATCGGGATACC
>58.103|3157526|38|NC_009523|CRISPRCasFinder
ATGACTTCCATCTCTTTTTCCTCCTTGCCCCCCCGCCT
>58.104|3157601|37|NC_009523|CRISPRCasFinder
TCGGAGGTCGCGTCCAGCCCCTTGCGGAGCTGGACGG
>58.105|3157675|37|NC_009523|CRISPRCasFinder
GAAACCCCGCCCGCCTTCGGCGGGGCGGGGCTGACAC
>58.106|3157749|42|NC_009523|CRISPRCasFinder
CCCCGTTGATCCCACATTGGAGGTTGCACCCCCCGAGTCGAA
>58.107|3157828|36|NC_009523|CRISPRCasFinder
GCCAAGGACAACCTAACTCCGTGGAGGTCCGGGTCC
>58.108|3157901|39|NC_009523|CRISPRCasFinder
CGTCGCGCGCCGCAAGCGCGGCGACGACGGCGACAGCCT
>58.109|3157977|39|NC_009523|CRISPRCasFinder
ACGAGGATGACAAGCCGCCACCCGGGCGGCTCGTCGAGA
>58.110|3151649|39|NC_009523|CRT
AGCACGGGGGCGGGGTCTACCCCGCCCGATCCAATCTGG
>58.111|3151722|41|NC_009523|CRT
AGCCTGGAGGGACGGGTCGTTTGCCAGGATGTTCCTAAGGC
>58.112|3151797|38|NC_009523|CRT
AGCTTCGCACCACGCCCGCCACACGGCGGCGATTCCGG
>58.113|3151869|40|NC_009523|CRT
AGCTCAGTGTTGGCTCCGGACCAAACTGCGGACTGTGCGT
>58.114|3151943|41|NC_009523|CRT
AGCCGCGCTCGCTGTCCTCGCCGCATGGCGGGAAGCAGCGG
>58.115|3152018|40|NC_009523|CRT
AGACGAGCTCACTCTCGGAGATGCTCCGCGCGATCTCGGT
>58.116|3152092|42|NC_009523|CRT
AGTGACCTGGCGCCGCCGGACGCGGCGGGTGCGGCGGACGCC
>58.117|3152168|38|NC_009523|CRT
AGTTTGGTTCGCACTCGTAACCCGGATATGGATCATAC
>58.118|3152240|40|NC_009523|CRT
AGTCCTGCGACGTCAGCGACAGCGCGACGCCCAGCGCCTG
>58.119|3152314|41|NC_009523|CRT
AGTTCAGCGCCTCCGCGTCTCCCTCGACCTTCTTCAGCTGA
>58.120|3152389|41|NC_009523|CRT
AGAGCGCCTCAATCAACGTGCTCTCGTCGACAACCTGCGGA
>58.121|3152464|41|NC_009523|CRT
AGACCTCCTTCTTGTTCATTTAGAAGTGCAAGCCAGAGCGA
>58.122|3152539|41|NC_009523|CRT
AACCCGCCCGTCTCCGCGACCAGGCGCTGCGCCTGGTCGCG
>58.123|3152614|41|NC_009523|CRT
AACTCGTCGGAGACCGCGGCCAGTTCTTTCCGAATGCGTTC
>58.124|3152689|41|NC_009523|CRT
AACATTAACGTTCGGTCCCATTCCATATATACGGTCCGTGG
>58.125|3152764|40|NC_009523|CRT
AACAACACTAAAGTGGAGGGAGGCGTATAAGTGACTACGC
>58.126|3152838|40|NC_009523|CRT
AACCCGCATCCGACTCGCACTTGGCTAACTTCGCCTGAAG
>58.127|3152912|39|NC_009523|CRT
AACGATACCGGTCCGTCATGTTTCTCCTCCTTTGCCCGC
>58.128|3152985|40|NC_009523|CRT
AACGAACGACCCGGCGCTCGGCGTCGCGCGCGCGCCTCTC
>58.129|3153059|39|NC_009523|CRT
AACGCGACGCCGAGCGCCGGGCCGCGCGGCTTGGCGCGG
>58.130|3153132|40|NC_009523|CRT
AACAGCGGACCGCGCCGCGGTAGACCTCCACGGCGTCATC
>58.131|3153206|40|NC_009523|CRT
AACAAGACGACGAGGAAGATAGCAGCCACCAGGCATCCTT
>58.132|3153280|39|NC_009523|CRT
AACCAACTCGCGCCGCCGCTTCACGCTGCGCGCGCTCCG
>58.133|3153353|40|NC_009523|CRT
AACACAACGTTGCAGCGTTCCTCGGCGAGGTCGGCTCCGA
>58.134|3153427|40|NC_009523|CRT
AACCGGACCCCCCAGGCGAGGGACAACCTCACGCCCTGCA
>58.135|3153501|44|NC_009523|CRT,PILER-CR
AACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
>58.136|3153579|42|NC_009523|CRT,PILER-CR
AACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
>58.137|3153655|38|NC_009523|CRT,PILER-CR
AACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
>58.138|3153727|41|NC_009523|CRT,PILER-CR
AACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
>58.139|3153802|40|NC_009523|CRT,PILER-CR
AACAGGCACGCCGTGCGGCGGCGCCAGTCTTGTCCAGCTG
>58.140|3153876|43|NC_009523|CRT,PILER-CR
AACAACTAGCCAAGGCGGAATTTGATGCCGAGGCGCTGCTGAA
>58.141|3153953|39|NC_009523|CRT,PILER-CR
AACAGGGGGTCCCCCCCCACAGCGTTTCGCAGCCGCTCG
>58.142|3154026|41|NC_009523|CRT,PILER-CR
AACTTTCGCAGCCGCTCGATGATCGCCTCCGCCTCCGTGAG
>58.143|3154101|41|NC_009523|CRT,PILER-CR
AACGATATGGATCTATTTTTTGGAGGTACGCGGCGTAGCAT
>58.144|3154176|38|NC_009523|CRT,PILER-CR
AACTTCGCCCGCGCTTCCGCCTCGGCCCGAGCGGCCGC
>58.145|3154248|40|NC_009523|CRT,PILER-CR
AACTTCTTTGCCCCGAAACCCCGCCCGCCTTCGGCAGACG
>58.146|3154322|40|NC_009523|CRT,PILER-CR
AACTTTCTTCCGCCTTCTTCTCTTCCGCCTTCTTGTTCTT
>58.147|3154396|43|NC_009523|CRT,PILER-CR
AACGCTTCCTGCTGCGCCCGTTGCTCTGCCTCCGCGCGGGAGA
>58.148|3154473|41|NC_009523|CRT,PILER-CR
AACCTGCCTCCGCGCGGGCCGCCGCTTCCTGCTGCGCGCGC
>58.149|3154548|40|NC_009523|CRT,PILER-CR
AACTTTTCTCCTCCTTGCCCCCCCGCCGTGCGGCGGGATG
>58.150|3154622|41|NC_009523|CRT,PILER-CR
AACTAAACTCATCTGGCGTACCCAGAGTCGAGTGAGTGCGA
>58.151|3154697|41|NC_009523|CRT,PILER-CR
AACGCTGCCAGTCGGTTCCACTGTCTGGTAACCGTCTTCCA
>58.152|3154772|38|NC_009523|CRT,PILER-CR
AACCTTCTCGCTTTGGATGACGACCTTAATCCTCCCTC
>58.153|3154844|42|NC_009523|CRT,PILER-CR
AACCTGCTCCTCCGCAACCGCACGGGCTCCCGCCTCCGCCCA
>58.154|3154920|44|NC_009523|CRT,PILER-CR
AACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
>58.155|3154998|42|NC_009523|CRT,PILER-CR
AACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
>58.156|3155074|38|NC_009523|CRT,PILER-CR
AACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
>58.157|3155146|41|NC_009523|CRT,PILER-CR
AACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
>58.158|3155221|41|NC_009523|CRT,PILER-CR
GACTCCGCCTCCTCCACGAGCGTCCACGCCGGGCGCGCCTC
>58.159|3155296|39|NC_009523|CRT,PILER-CR
GACGCGAGGGGGAGATCGGGCCGCGCAGCGGGCGCAGAT
>58.160|3155369|40|NC_009523|CRT,PILER-CR
GACGCGTCGTCCTCCTCGCCCCGCAGCCGGTCGAGGAGGT
>58.161|3155443|41|NC_009523|CRT,PILER-CR
GACCTGCAGCAGCAGGGGGGGCGGGATCACGAATGATCCCA
>58.162|3155518|39|NC_009523|CRT,PILER-CR
GACCAGACGATATCCTCGTCCGCGCCGGCGACCGCGCGC
>58.163|3155591|40|NC_009523|CRT,PILER-CR
GACGTCGCCAGACGCTGCTGGCGCTCGATGCGACCTGGAC
>58.164|3155665|42|NC_009523|CRT,PILER-CR
GACCCTGTTTTGTTGCAGGTACGCCTGTGTATACAGCAAATG
>58.165|3155741|40|NC_009523|CRT,PILER-CR
GACTAGCTCACGATTGTACATTTAGAGTGCATCGCCAAAG
>58.166|3155815|40|NC_009523|CRT,PILER-CR
GACATAGTCACAACTAGGCTAAGGCACCCTTCAAGCGCAA
>58.167|3155889|38|NC_009523|CRT,PILER-CR
GACCTGGTGGGGTTAATCGACCGGGATCCGGAGCGCAG
>58.168|3155961|40|NC_009523|CRT,PILER-CR
GACACCGCCGCCCTTCGCACTCGTAACCCGTACGTGTAAC
>58.169|3156035|41|NC_009523|CRT,PILER-CR
GACCGGCTTCCCGCGCCGCCTCCGCGCGCCACGCCCGCCAC
>58.170|3156110|42|NC_009523|CRT,PILER-CR
GACAACGCGCCCCCGGCGGCGCCGGGAGCGGGGGAGGGACAA
>58.171|3156186|44|NC_009523|CRT,PILER-CR
GACTCCTTGCCCCCCCGCCGTGCGGCGAGGCGGGCATTCAACAT
>58.172|3156264|38|NC_009523|CRT,PILER-CR
GACACGATGTCGCGGGAGGACCTCGCCCGATCCAGATT
>58.173|3156336|40|NC_009523|CRT,PILER-CR
GACCTCCCGGACCCCCTCTCCCGATGCCGCAGCATCATTG
>58.174|3156410|42|NC_009523|CRT,PILER-CR
GACACGGCGAGGCGCGCCGCGGACCCGCCGGCGCGCGCCGGA
>58.175|3156486|41|NC_009523|CRT,PILER-CR
GACCTGCGAGACGGCGTCTCTCAGCACAACTAAGGCGTTCC
>58.176|3156561|38|NC_009523|CRT,PILER-CR
GACTCGACGAGCGTGCGCTCGTCGACACGCTTCACGAT
>58.177|3156633|39|NC_009523|CRT,PILER-CR
GACGCGCCTGCGCCTCCGCATGCGCCCGCCATACGGCGA
>58.178|3156706|41|NC_009523|CRT,PILER-CR
GACTCGCAGACGGCGTGCCAGAGGTCATCGTTGAGCGCCAG
>58.179|3156781|38|NC_009523|CRT,PILER-CR
GACAAGATCTCCTCGATGTCGTCCATACTCCCTCCTTT
>58.180|3156853|42|NC_009523|CRT,PILER-CR
GACACGGCGAGCGCTGCGACAACCAGCGCCGTCGTCGAGAGA
>58.181|3156929|41|NC_009523|CRT,PILER-CR
GACTGGTGGTCCTCCTTGCTGCCCCCCGCCTTGCGGCGAGC
>58.182|3157004|41|NC_009523|CRT,PILER-CR
GACGAGATGATGACTCCGACTTCCATGTGGTGGTCCTCCTT
>58.183|3157079|37|NC_009523|CRT,PILER-CR
GACACGGGTCGTTTTCCAACACGTGCCGCAGGCGCTG
>58.184|3157150|40|NC_009523|CRT,PILER-CR
GACGTCTCCGGCGCTGCCGCCGCCGCCGCCGCCGCGTCCG
>58.185|3157224|41|NC_009523|CRT,PILER-CR
GACTAGACGAAGTGCCTTGAGGGGAAAAGGAGCAAAGTCAA
>58.186|3157299|41|NC_009523|CRT,PILER-CR
GACAACTATCCGTCCAACTTACTAACTCACCAACAGCCTTA
>58.187|3157374|41|NC_009523|CRT,PILER-CR
GACATTAGCATAAAAATAACCGCTGCTAACGCAGCCAGCAA
>58.188|3157449|40|NC_009523|CRT,PILER-CR
GACATCTAATATAAGGATAGCGTCGTCTAATCGGGATACC
>58.189|3157523|41|NC_009523|CRT,PILER-CR
GACATGACTTCCATCTCTTTTTCCTCCTTGCCCCCCCGCCT
>58.190|3157598|40|NC_009523|CRT,PILER-CR
GACTCGGAGGTCGCGTCCAGCCCCTTGCGGAGCTGGACGG
>58.191|3157672|40|NC_009523|CRT,PILER-CR
GACGAAACCCCGCCCGCCTTCGGCGGGGCGGGGCTGACAC
>58.192|3157746|45|NC_009523|CRT,PILER-CR
GACCCCCGTTGATCCCACATTGGAGGTTGCACCCCCCGAGTCGAA
>58.193|3157825|39|NC_009523|CRT,PILER-CR
GACGCCAAGGACAACCTAACTCCGTGGAGGTCCGGGTCC
>58.194|3157898|42|NC_009523|CRT,PILER-CR
GACCGTCGCGCGCCGCAAGCGCGGCGACGACGGCGACAGCCT
>58.195|3157974|42|NC_009523|CRT
GACACGAGGATGACAAGCCGCCACCCGGGCGGCTCGTCGAGA

CRISPR arrays and Neighbor proteins around NC_009523_58

CRISPR arrays

The CRISPR arrays of NC_009523_58

>merge|NC_009523|58|3151615-3158052|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGCACGGGGGCGGGGTCTACCCCGCCCGATCCAATCTGGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGCCTGGAGGGACGGGTCGTTTGCCAGGATGTTCCTAAGGCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGCTTCGCACCACGCCCGCCACACGGCGGCGATTCCGGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGCTCAGTGTTGGCTCCGGACCAAACTGCGGACTGTGCGTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGCCGCGCTCGCTGTCCTCGCCGCATGGCGGGAAGCAGCGGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGACGAGCTCACTCTCGGAGATGCTCCGCGCGATCTCGGTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGTGACCTGGCGCCGCCGGACGCGGCGGGTGCGGCGGACGCCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGTTTGGTTCGCACTCGTAACCCGGATATGGATCATACGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGTCCTGCGACGTCAGCGACAGCGCGACGCCCAGCGCCTGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGTTCAGCGCCTCCGCGTCTCCCTCGACCTTCTTCAGCTGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGAGCGCCTCAATCAACGTGCTCTCGTCGACAACCTGCGGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGACCTCCTTCTTGTTCATTTAGAAGTGCAAGCCAGAGCGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCCGCCCGTCTCCGCGACCAGGCGCTGCGCCTGGTCGCGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTCGTCGGAGACCGCGGCCAGTTCTTTCCGAATGCGTTCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACATTAACGTTCGGTCCCATTCCATATATACGGTCCGTGGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACAACACTAAAGTGGAGGGAGGCGTATAAGTGACTACGCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCCGCATCCGACTCGCACTTGGCTAACTTCGCCTGAAGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACGATACCGGTCCGTCATGTTTCTCCTCCTTTGCCCGCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACGAACGACCCGGCGCTCGGCGTCGCGCGCGCGCCTCTCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACGCGACGCCGAGCGCCGGGCCGCGCGGCTTGGCGCGGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACAGCGGACCGCGCCGCGGTAGACCTCCACGGCGTCATCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACAAGACGACGAGGAAGATAGCAGCCACCAGGCATCCTTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCAACTCGCGCCGCCGCTTCACGCTGCGCGCGCTCCGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACACAACGTTGCAGCGTTCCTCGGCGAGGTCGGCTCCGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCGGACCCCCCAGGCGAGGGACAACCTCACGCCCTGCAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATATGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACAGGCACGCCGTGCGGCGGCGCCAGTCTTGTCCAGCTGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACAACTAGCCAAGGCGGAATTTGATGCCGAGGCGCTGCTGAAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACAGGGGGTCCCCCCCCACAGCGTTTCGCAGCCGCTCGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTTTCGCAGCCGCTCGATGATCGCCTCCGCCTCCGTGAGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACGATATGGATCTATTTTTTGGAGGTACGCGGCGTAGCATGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTTCGCCCGCGCTTCCGCCTCGGCCCGAGCGGCCGCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTTCTTTGCCCCGAAACCCCGCCCGCCTTCGGCAGACGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTTTCTTCCGCCTTCTTCTCTTCCGCCTTCTTGTTCTTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACGCTTCCTGCTGCGCCCGTTGCTCTGCCTCCGCGCGGGAGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCTGCCTCCGCGCGGGCCGCCGCTTCCTGCTGCGCGCGCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTTTTCTCCTCCTTGCCCCCCCGCCGTGCGGCGGGATGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTAAACTCATCTGGCGTACCCAGAGTCGAGTGAGTGCGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACGCTGCCAGTCGGTTCCACTGTCTGGTAACCGTCTTCCAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCTTCTCGCTTTGGATGACGACCTTAATCCTCCCTCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCTGCTCCTCCGCAACCGCACGGGCTCCCGCCTCCGCCCAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATATGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACTCCGCCTCCTCCACGAGCGTCCACGCCGGGCGCGCCTCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACGCGAGGGGGAGATCGGGCCGCGCAGCGGGCGCAGATGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACGCGTCGTCCTCCTCGCCCCGCAGCCGGTCGAGGAGGTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCTGCAGCAGCAGGGGGGGCGGGATCACGAATGATCCCAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCAGACGATATCCTCGTCCGCGCCGGCGACCGCGCGCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACGTCGCCAGACGCTGCTGGCGCTCGATGCGACCTGGACGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCCTGTTTTGTTGCAGGTACGCCTGTGTATACAGCAAATGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACTAGCTCACGATTGTACATTTAGAGTGCATCGCCAAAGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACATAGTCACAACTAGGCTAAGGCACCCTTCAAGCGCAAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCTGGTGGGGTTAATCGACCGGGATCCGGAGCGCAGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACACCGCCGCCCTTCGCACTCGTAACCCGTACGTGTAACGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCGGCTTCCCGCGCCGCCTCCGCGCGCCACGCCCGCCACGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACAACGCGCCCCCGGCGGCGCCGGGAGCGGGGGAGGGACAAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACTCCTTGCCCCCCCGCCGTGCGGCGAGGCGGGCATTCAACATGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACACGATGTCGCGGGAGGACCTCGCCCGATCCAGATTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCTCCCGGACCCCCTCTCCCGATGCCGCAGCATCATTGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACACGGCGAGGCGCGCCGCGGACCCGCCGGCGCGCGCCGGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCTGCGAGACGGCGTCTCTCAGCACAACTAAGGCGTTCCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACTCGACGAGCGTGCGCTCGTCGACACGCTTCACGATGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACGCGCCTGCGCCTCCGCATGCGCCCGCCATACGGCGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACTCGCAGACGGCGTGCCAGAGGTCATCGTTGAGCGCCAGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACAAGATCTCCTCGATGTCGTCCATACTCCCTCCTTTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACACGGCGAGCGCTGCGACAACCAGCGCCGTCGTCGAGAGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACTGGTGGTCCTCCTTGCTGCCCCCCGCCTTGCGGCGAGCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACGAGATGATGACTCCGACTTCCATGTGGTGGTCCTCCTTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACACGGGTCGTTTTCCAACACGTGCCGCAGGCGCTGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACGTCTCCGGCGCTGCCGCCGCCGCCGCCGCCGCGTCCGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACTAGACGAAGTGCCTTGAGGGGAAAAGGAGCAAAGTCAAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACAACTATCCGTCCAACTTACTAACTCACCAACAGCCTTAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACATTAGCATAAAAATAACCGCTGCTAACGCAGCCAGCAAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACATCTAATATAAGGATAGCGTCGTCTAATCGGGATACCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACATGACTTCCATCTCTTTTTCCTCCTTGCCCCCCCGCCTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACTCGGAGGTCGCGTCCAGCCCCTTGCGGAGCTGGACGGGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACGAAACCCCGCCCGCCTTCGGCGGGGCGGGGCTGACACGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCCCCGTTGATCCCACATTGGAGGTTGCACCCCCCGAGTCGAAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACGCCAAGGACAACCTAACTCCGTGGAGGTCCGGGTCCGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACCGTCGCGCGCCGCAAGCGCGGCGACGACGGCGACAGCCTGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGACACGAGGATGACAAGCCGCCACCCGGGCGGCTCGTCGAGAGAAGCGACCACTGCCCCGCAATGAAGGGGAATGTCAG

>NC_009523|58|7|3151615-3153353|PILER-CR
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCACGGGGGCGGGGTCTACCCCGCCCGATCCAATCTGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCCTGGAGGGACGGGTCGTTTGCCAGGATGTTCCTAAGGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCTTCGCACCACGCCCGCCACACGGCGGCGATTCCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCTCAGTGTTGGCTCCGGACCAAACTGCGGACTGTGCGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCCGCGCTCGCTGTCCTCGCCGCATGGCGGGAAGCAGCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GACGAGCTCACTCTCGGAGATGCTCCGCGCGATCTCGGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GTGACCTGGCGCCGCCGGACGCGGCGGGTGCGGCGGACGCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GTTTGGTTCGCACTCGTAACCCGGATATGGATCATAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GTCCTGCGACGTCAGCGACAGCGCGACGCCCAGCGCCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GTTCAGCGCCTCCGCGTCTCCCTCGACCTTCTTCAGCTGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GAGCGCCTCAATCAACGTGCTCTCGTCGACAACCTGCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GACCTCCTTCTTGTTCATTTAGAAGTGCAAGCCAGAGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACCCGCCCGTCTCCGCGACCAGGCGCTGCGCCTGGTCGCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACTCGTCGGAGACCGCGGCCAGTTCTTTCCGAATGCGTTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACATTAACGTTCGGTCCCATTCCATATATACGGTCCGTGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACAACACTAAAGTGGAGGGAGGCGTATAAGTGACTACGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACCCGCATCCGACTCGCACTTGGCTAACTTCGCCTGAAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACGATACCGGTCCGTCATGTTTCTCCTCCTTTGCCCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACGAACGACCCGGCGCTCGGCGTCGCGCGCGCGCCTCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACGCGACGCCGAGCGCCGGGCCGCGCGGCTTGGCGCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACAGCGGACCGCGCCGCGGTAGACCTCCACGGCGTCATC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACAAGACGACGAGGAAGATAGCAGCCACCAGGCATCCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACCAACTCGCGCCGCCGCTTCACGCTGCGCGCGCTCCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACACAACGTTGCAGCGTTCCTCGGCGAGGTCGGCTCCGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCGGACCCCCCAGGCGAGGGACAACCTCACGCCCTGCAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAGGCACGCCGTGCGGCGGCGCCAGTCTTGTCCAGCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAACTAGCCAAGGCGGAATTTGATGCCGAGGCGCTGCTGAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAGGGGGTCCCCCCCCACAGCGTTTCGCAGCCGCTCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGCAGCCGCTCGATGATCGCCTCCGCCTCCGTGAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGATATGGATCTATTTTTTGGAGGTACGCGGCGTAGCAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTCGCCCGCGCTTCCGCCTCGGCCCGAGCGGCCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTCTTTGCCCCGAAACCCCGCCCGCCTTCGGCAGACG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCTTCCGCCTTCTTCTCTTCCGCCTTCTTGTTCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGCTTCCTGCTGCGCCCGTTGCTCTGCCTCCGCGCGGGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTGCCTCCGCGCGGGCCGCCGCTTCCTGCTGCGCGCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTTCTCCTCCTTGCCCCCCCGCCGTGCGGCGGGATG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTAAACTCATCTGGCGTACCCAGAGTCGAGTGAGTGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGCTGCCAGTCGGTTCCACTGTCTGGTAACCGTCTTCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTTCTCGCTTTGGATGACGACCTTAATCCTCCCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTGCTCCTCCGCAACCGCACGGGCTCCCGCCTCCGCCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCCGCCTCCTCCACGAGCGTCCACGCCGGGCGCGCCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGAGGGGGAGATCGGGCCGCGCAGCGGGCGCAGAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGTCGTCCTCCTCGCCCCGCAGCCGGTCGAGGAGGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGCAGCAGCAGGGGGGGCGGGATCACGAATGATCCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCAGACGATATCCTCGTCCGCGCCGGCGACCGCGCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGTCGCCAGACGCTGCTGGCGCTCGATGCGACCTGGAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCCTGTTTTGTTGCAGGTACGCCTGTGTATACAGCAAATG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTAGCTCACGATTGTACATTTAGAGTGCATCGCCAAAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATAGTCACAACTAGGCTAAGGCACCCTTCAAGCGCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGGTGGGGTTAATCGACCGGGATCCGGAGCGCAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACCGCCGCCCTTCGCACTCGTAACCCGTACGTGTAAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCGGCTTCCCGCGCCGCCTCCGCGCGCCACGCCCGCCAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAACGCGCCCCCGGCGGCGCCGGGAGCGGGGGAGGGACAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCCTTGCCCCCCCGCCGTGCGGCGAGGCGGGCATTCAACAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGATGTCGCGGGAGGACCTCGCCCGATCCAGATT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTCCCGGACCCCCTCTCCCGATGCCGCAGCATCATTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGCGAGGCGCGCCGCGGACCCGCCGGCGCGCGCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGCGAGACGGCGTCTCTCAGCACAACTAAGGCGTTCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGACGAGCGTGCGCTCGTCGACACGCTTCACGAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGCCTGCGCCTCCGCATGCGCCCGCCATACGGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGCAGACGGCGTGCCAGAGGTCATCGTTGAGCGCCAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAAGATCTCCTCGATGTCGTCCATACTCCCTCCTTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGCGAGCGCTGCGACAACCAGCGCCGTCGTCGAGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTGGTGGTCCTCCTTGCTGCCCCCCGCCTTGCGGCGAGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGAGATGATGACTCCGACTTCCATGTGGTGGTCCTCCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGGTCGTTTTCCAACACGTGCCGCAGGCGCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGTCTCCGGCGCTGCCGCCGCCGCCGCCGCCGCGTCCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTAGACGAAGTGCCTTGAGGGGAAAAGGAGCAAAGTCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAACTATCCGTCCAACTTACTAACTCACCAACAGCCTTA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATTAGCATAAAAATAACCGCTGCTAACGCAGCCAGCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATCTAATATAAGGATAGCGTCGTCTAATCGGGATACC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATGACTTCCATCTCTTTTTCCTCCTTGCCCCCCCGCCT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGGAGGTCGCGTCCAGCCCCTTGCGGAGCTGGACGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGAAACCCCGCCCGCCTTCGGCGGGGCGGGGCTGACAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCCCCGTTGATCCCACATTGGAGGTTGCACCCCCCGAGTCGAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCCAAGGACAACCTAACTCCGTGGAGGTCCGGGTCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCGTCGCGCGCCGCAAGCGCGGCGACGACGGCGACAGCCT


>NC_009523|58|55|3151615-3158052|CRISPRCasFinder
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGC	ACGGGGGCGGGGTCTACCCCGCCCGATCCAATCTGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGC	CTGGAGGGACGGGTCGTTTGCCAGGATGTTCCTAAGGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGC	TTCGCACCACGCCCGCCACACGGCGGCGATTCCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGC	TCAGTGTTGGCTCCGGACCAAACTGCGGACTGTGCGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGC	CGCGCTCGCTGTCCTCGCCGCATGGCGGGAAGCAGCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGA	CGAGCTCACTCTCGGAGATGCTCCGCGCGATCTCGGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGT	GACCTGGCGCCGCCGGACGCGGCGGGTGCGGCGGACGCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGT	TTGGTTCGCACTCGTAACCCGGATATGGATCATAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGT	CCTGCGACGTCAGCGACAGCGCGACGCCCAGCGCCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGT	TCAGCGCCTCCGCGTCTCCCTCGACCTTCTTCAGCTGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGA	GCGCCTCAATCAACGTGCTCTCGTCGACAACCTGCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAGA	CCTCCTTCTTGTTCATTTAGAAGTGCAAGCCAGAGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	CCGCCCGTCTCCGCGACCAGGCGCTGCGCCTGGTCGCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TCGTCGGAGACCGCGGCCAGTTCTTTCCGAATGCGTTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	ATTAACGTTCGGTCCCATTCCATATATACGGTCCGTGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	AACACTAAAGTGGAGGGAGGCGTATAAGTGACTACGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	CCGCATCCGACTCGCACTTGGCTAACTTCGCCTGAAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	GATACCGGTCCGTCATGTTTCTCCTCCTTTGCCCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	GAACGACCCGGCGCTCGGCGTCGCGCGCGCGCCTCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	GCGACGCCGAGCGCCGGGCCGCGCGGCTTGGCGCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	AGCGGACCGCGCCGCGGTAGACCTCCACGGCGTCATC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	AAGACGACGAGGAAGATAGCAGCCACCAGGCATCCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	CAACTCGCGCCGCCGCTTCACGCTGCGCGCGCTCCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	ACAACGTTGCAGCGTTCCTCGGCGAGGTCGGCTCCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	CGGACCCCCCAGGCGAGGGACAACCTCACGCCCTGCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	GTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	ACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	AAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	AGGCACGCCGTGCGGCGGCGCCAGTCTTGTCCAGCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	AACTAGCCAAGGCGGAATTTGATGCCGAGGCGCTGCTGAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	AGGGGGTCCCCCCCCACAGCGTTTCGCAGCCGCTCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TTTCGCAGCCGCTCGATGATCGCCTCCGCCTCCGTGAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	GATATGGATCTATTTTTTGGAGGTACGCGGCGTAGCAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TTCGCCCGCGCTTCCGCCTCGGCCCGAGCGGCCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TTCTTTGCCCCGAAACCCCGCCCGCCTTCGGCAGACG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TTTCTTCCGCCTTCTTCTCTTCCGCCTTCTTGTTCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	GCTTCCTGCTGCGCCCGTTGCTCTGCCTCCGCGCGGGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	CTGCCTCCGCGCGGGCCGCCGCTTCCTGCTGCGCGCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TTTTCTCCTCCTTGCCCCCCCGCCGTGCGGCGGGATG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TAAACTCATCTGGCGTACCCAGAGTCGAGTGAGTGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	GCTGCCAGTCGGTTCCACTGTCTGGTAACCGTCTTCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	CTTCTCGCTTTGGATGACGACCTTAATCCTCCCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	CTGCTCCTCCGCAACCGCACGGGCTCCCGCCTCCGCCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	GTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	ACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	AAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAAC	TTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	TCCGCCTCCTCCACGAGCGTCCACGCCGGGCGCGCCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	GCGAGGGGGAGATCGGGCCGCGCAGCGGGCGCAGAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	GCGTCGTCCTCCTCGCCCCGCAGCCGGTCGAGGAGGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CTGCAGCAGCAGGGGGGGCGGGATCACGAATGATCCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CAGACGATATCCTCGTCCGCGCCGGCGACCGCGCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	GTCGCCAGACGCTGCTGGCGCTCGATGCGACCTGGAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CCTGTTTTGTTGCAGGTACGCCTGTGTATACAGCAAATG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	TAGCTCACGATTGTACATTTAGAGTGCATCGCCAAAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ATAGTCACAACTAGGCTAAGGCACCCTTCAAGCGCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CTGGTGGGGTTAATCGACCGGGATCCGGAGCGCAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ACCGCCGCCCTTCGCACTCGTAACCCGTACGTGTAAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CGGCTTCCCGCGCCGCCTCCGCGCGCCACGCCCGCCAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	AACGCGCCCCCGGCGGCGCCGGGAGCGGGGGAGGGACAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	TCCTTGCCCCCCCGCCGTGCGGCGAGGCGGGCATTCAACAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ACGATGTCGCGGGAGGACCTCGCCCGATCCAGATT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CTCCCGGACCCCCTCTCCCGATGCCGCAGCATCATTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ACGGCGAGGCGCGCCGCGGACCCGCCGGCGCGCGCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CTGCGAGACGGCGTCTCTCAGCACAACTAAGGCGTTCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	TCGACGAGCGTGCGCTCGTCGACACGCTTCACGAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	GCGCCTGCGCCTCCGCATGCGCCCGCCATACGGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	TCGCAGACGGCGTGCCAGAGGTCATCGTTGAGCGCCAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	AAGATCTCCTCGATGTCGTCCATACTCCCTCCTTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ACGGCGAGCGCTGCGACAACCAGCGCCGTCGTCGAGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	TGGTGGTCCTCCTTGCTGCCCCCCGCCTTGCGGCGAGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	GAGATGATGACTCCGACTTCCATGTGGTGGTCCTCCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ACGGGTCGTTTTCCAACACGTGCCGCAGGCGCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	GTCTCCGGCGCTGCCGCCGCCGCCGCCGCCGCGTCCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	TAGACGAAGTGCCTTGAGGGGAAAAGGAGCAAAGTCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	AACTATCCGTCCAACTTACTAACTCACCAACAGCCTTA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ATTAGCATAAAAATAACCGCTGCTAACGCAGCCAGCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ATCTAATATAAGGATAGCGTCGTCTAATCGGGATACC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ATGACTTCCATCTCTTTTTCCTCCTTGCCCCCCCGCCT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	TCGGAGGTCGCGTCCAGCCCCTTGCGGAGCTGGACGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	GAAACCCCGCCCGCCTTCGGCGGGGCGGGGCTGACAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CCCCGTTGATCCCACATTGGAGGTTGCACCCCCCGAGTCGAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	GCCAAGGACAACCTAACTCCGTGGAGGTCCGGGTCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	CGTCGCGCGCCGCAAGCGCGGCGACGACGGCGACAGCCT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAGAC	ACGAGGATGACAAGCCGCCACCCGGGCGGCTCGTCGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGAATGTCAG

>NC_009523|58|7|3151615-3158049|CRT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGCACGGGGGCGGGGTCTACCCCGCCCGATCCAATCTGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGCCTGGAGGGACGGGTCGTTTGCCAGGATGTTCCTAAGGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGCTTCGCACCACGCCCGCCACACGGCGGCGATTCCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGCTCAGTGTTGGCTCCGGACCAAACTGCGGACTGTGCGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGCCGCGCTCGCTGTCCTCGCCGCATGGCGGGAAGCAGCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGACGAGCTCACTCTCGGAGATGCTCCGCGCGATCTCGGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGTGACCTGGCGCCGCCGGACGCGGCGGGTGCGGCGGACGCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGTTTGGTTCGCACTCGTAACCCGGATATGGATCATAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGTCCTGCGACGTCAGCGACAGCGCGACGCCCAGCGCCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGTTCAGCGCCTCCGCGTCTCCCTCGACCTTCTTCAGCTGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGAGCGCCTCAATCAACGTGCTCTCGTCGACAACCTGCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AGACCTCCTTCTTGTTCATTTAGAAGTGCAAGCCAGAGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCCGCCCGTCTCCGCGACCAGGCGCTGCGCCTGGTCGCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTCGTCGGAGACCGCGGCCAGTTCTTTCCGAATGCGTTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACATTAACGTTCGGTCCCATTCCATATATACGGTCCGTGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAACACTAAAGTGGAGGGAGGCGTATAAGTGACTACGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCCGCATCCGACTCGCACTTGGCTAACTTCGCCTGAAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGATACCGGTCCGTCATGTTTCTCCTCCTTTGCCCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGAACGACCCGGCGCTCGGCGTCGCGCGCGCGCCTCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGCGACGCCGAGCGCCGGGCCGCGCGGCTTGGCGCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAGCGGACCGCGCCGCGGTAGACCTCCACGGCGTCATC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAAGACGACGAGGAAGATAGCAGCCACCAGGCATCCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCAACTCGCGCCGCCGCTTCACGCTGCGCGCGCTCCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACACAACGTTGCAGCGTTCCTCGGCGAGGTCGGCTCCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCGGACCCCCCAGGCGAGGGACAACCTCACGCCCTGCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAGGCACGCCGTGCGGCGGCGCCAGTCTTGTCCAGCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAACTAGCCAAGGCGGAATTTGATGCCGAGGCGCTGCTGAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAGGGGGTCCCCCCCCACAGCGTTTCGCAGCCGCTCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGCAGCCGCTCGATGATCGCCTCCGCCTCCGTGAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGATATGGATCTATTTTTTGGAGGTACGCGGCGTAGCAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTCGCCCGCGCTTCCGCCTCGGCCCGAGCGGCCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTCTTTGCCCCGAAACCCCGCCCGCCTTCGGCAGACG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCTTCCGCCTTCTTCTCTTCCGCCTTCTTGTTCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGCTTCCTGCTGCGCCCGTTGCTCTGCCTCCGCGCGGGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTGCCTCCGCGCGGGCCGCCGCTTCCTGCTGCGCGCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTTCTCCTCCTTGCCCCCCCGCCGTGCGGCGGGATG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTAAACTCATCTGGCGTACCCAGAGTCGAGTGAGTGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGCTGCCAGTCGGTTCCACTGTCTGGTAACCGTCTTCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTTCTCGCTTTGGATGACGACCTTAATCCTCCCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTGCTCCTCCGCAACCGCACGGGCTCCCGCCTCCGCCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCCGCCTCCTCCACGAGCGTCCACGCCGGGCGCGCCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGAGGGGGAGATCGGGCCGCGCAGCGGGCGCAGAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGTCGTCCTCCTCGCCCCGCAGCCGGTCGAGGAGGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGCAGCAGCAGGGGGGGCGGGATCACGAATGATCCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCAGACGATATCCTCGTCCGCGCCGGCGACCGCGCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGTCGCCAGACGCTGCTGGCGCTCGATGCGACCTGGAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCCTGTTTTGTTGCAGGTACGCCTGTGTATACAGCAAATG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTAGCTCACGATTGTACATTTAGAGTGCATCGCCAAAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATAGTCACAACTAGGCTAAGGCACCCTTCAAGCGCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGGTGGGGTTAATCGACCGGGATCCGGAGCGCAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACCGCCGCCCTTCGCACTCGTAACCCGTACGTGTAAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCGGCTTCCCGCGCCGCCTCCGCGCGCCACGCCCGCCAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAACGCGCCCCCGGCGGCGCCGGGAGCGGGGGAGGGACAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCCTTGCCCCCCCGCCGTGCGGCGAGGCGGGCATTCAACAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGATGTCGCGGGAGGACCTCGCCCGATCCAGATT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTCCCGGACCCCCTCTCCCGATGCCGCAGCATCATTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGCGAGGCGCGCCGCGGACCCGCCGGCGCGCGCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGCGAGACGGCGTCTCTCAGCACAACTAAGGCGTTCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGACGAGCGTGCGCTCGTCGACACGCTTCACGAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGCCTGCGCCTCCGCATGCGCCCGCCATACGGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGCAGACGGCGTGCCAGAGGTCATCGTTGAGCGCCAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAAGATCTCCTCGATGTCGTCCATACTCCCTCCTTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGCGAGCGCTGCGACAACCAGCGCCGTCGTCGAGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTGGTGGTCCTCCTTGCTGCCCCCCGCCTTGCGGCGAGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGAGATGATGACTCCGACTTCCATGTGGTGGTCCTCCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGGTCGTTTTCCAACACGTGCCGCAGGCGCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGTCTCCGGCGCTGCCGCCGCCGCCGCCGCCGCGTCCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTAGACGAAGTGCCTTGAGGGGAAAAGGAGCAAAGTCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAACTATCCGTCCAACTTACTAACTCACCAACAGCCTTA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATTAGCATAAAAATAACCGCTGCTAACGCAGCCAGCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATCTAATATAAGGATAGCGTCGTCTAATCGGGATACC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATGACTTCCATCTCTTTTTCCTCCTTGCCCCCCCGCCT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGGAGGTCGCGTCCAGCCCCTTGCGGAGCTGGACGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGAAACCCCGCCCGCCTTCGGCGGGGCGGGGCTGACAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCCCCGTTGATCCCACATTGGAGGTTGCACCCCCCGAGTCGAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCCAAGGACAACCTAACTCCGTGGAGGTCCGGGTCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCGTCGCGCGCCGCAAGCGCGGCGACGACGGCGACAGCCT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGAGGATGACAAGCCGCCACCCGGGCGGCTCGTCGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGAATGT

>NC_009523|58|8|3153467-3157973|PILER-CR
	GCACGGGGGCGGGGTCTACCCCGCCCGATCCAATCTGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCCTGGAGGGACGGGTCGTTTGCCAGGATGTTCCTAAGGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCTTCGCACCACGCCCGCCACACGGCGGCGATTCCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCTCAGTGTTGGCTCCGGACCAAACTGCGGACTGTGCGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GCCGCGCTCGCTGTCCTCGCCGCATGGCGGGAAGCAGCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GACGAGCTCACTCTCGGAGATGCTCCGCGCGATCTCGGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GTGACCTGGCGCCGCCGGACGCGGCGGGTGCGGCGGACGCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GTTTGGTTCGCACTCGTAACCCGGATATGGATCATAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GTCCTGCGACGTCAGCGACAGCGCGACGCCCAGCGCCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GTTCAGCGCCTCCGCGTCTCCCTCGACCTTCTTCAGCTGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GAGCGCCTCAATCAACGTGCTCTCGTCGACAACCTGCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	GACCTCCTTCTTGTTCATTTAGAAGTGCAAGCCAGAGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACCCGCCCGTCTCCGCGACCAGGCGCTGCGCCTGGTCGCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACTCGTCGGAGACCGCGGCCAGTTCTTTCCGAATGCGTTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACATTAACGTTCGGTCCCATTCCATATATACGGTCCGTGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACAACACTAAAGTGGAGGGAGGCGTATAAGTGACTACGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACCCGCATCCGACTCGCACTTGGCTAACTTCGCCTGAAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACGATACCGGTCCGTCATGTTTCTCCTCCTTTGCCCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACGAACGACCCGGCGCTCGGCGTCGCGCGCGCGCCTCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACGCGACGCCGAGCGCCGGGCCGCGCGGCTTGGCGCGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACAGCGGACCGCGCCGCGGTAGACCTCCACGGCGTCATC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACAAGACGACGAGGAAGATAGCAGCCACCAGGCATCCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAA	ACCAACTCGCGCCGCCGCTTCACGCTGCGCGCGCTCCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACACAACGTTGCAGCGTTCCTCGGCGAGGTCGGCTCCGAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGAAACCGGACCCCCCAGGCGAGGGACAACCTCACGCCCTGCAGAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAGGCACGCCGTGCGGCGGCGCCAGTCTTGTCCAGCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAACTAGCCAAGGCGGAATTTGATGCCGAGGCGCTGCTGAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAGGGGGTCCCCCCCCACAGCGTTTCGCAGCCGCTCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGCAGCCGCTCGATGATCGCCTCCGCCTCCGTGAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGATATGGATCTATTTTTTGGAGGTACGCGGCGTAGCAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTCGCCCGCGCTTCCGCCTCGGCCCGAGCGGCCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTCTTTGCCCCGAAACCCCGCCCGCCTTCGGCAGACG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCTTCCGCCTTCTTCTCTTCCGCCTTCTTGTTCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGCTTCCTGCTGCGCCCGTTGCTCTGCCTCCGCGCGGGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTGCCTCCGCGCGGGCCGCCGCTTCCTGCTGCGCGCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTTCTCCTCCTTGCCCCCCCGCCGTGCGGCGGGATG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTAAACTCATCTGGCGTACCCAGAGTCGAGTGAGTGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGCTGCCAGTCGGTTCCACTGTCTGGTAACCGTCTTCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTTCTCGCTTTGGATGACGACCTTAATCCTCCCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACCTGCTCCTCCGCAACCGCACGGGCTCCCGCCTCCGCCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACGTACGGCGGGGAGATCCCCATGGCCGGCGCCCCTCCCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACACGGTCAACGACATGCCCGGTCTTCACCGTCCCCAATAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACAAATAAAAGAAGAATGCGTGTTGTGACGGCGAAGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	AACTTTCGATTTGGTTCTCGAGTCGCTGGCGACGCTCTGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCCGCCTCCTCCACGAGCGTCCACGCCGGGCGCGCCTC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGAGGGGGAGATCGGGCCGCGCAGCGGGCGCAGAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGTCGTCCTCCTCGCCCCGCAGCCGGTCGAGGAGGT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGCAGCAGCAGGGGGGGCGGGATCACGAATGATCCCA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCAGACGATATCCTCGTCCGCGCCGGCGACCGCGCGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGTCGCCAGACGCTGCTGGCGCTCGATGCGACCTGGAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCCTGTTTTGTTGCAGGTACGCCTGTGTATACAGCAAATG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTAGCTCACGATTGTACATTTAGAGTGCATCGCCAAAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATAGTCACAACTAGGCTAAGGCACCCTTCAAGCGCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGGTGGGGTTAATCGACCGGGATCCGGAGCGCAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACCGCCGCCCTTCGCACTCGTAACCCGTACGTGTAAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCGGCTTCCCGCGCCGCCTCCGCGCGCCACGCCCGCCAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAACGCGCCCCCGGCGGCGCCGGGAGCGGGGGAGGGACAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCCTTGCCCCCCCGCCGTGCGGCGAGGCGGGCATTCAACAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGATGTCGCGGGAGGACCTCGCCCGATCCAGATT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTCCCGGACCCCCTCTCCCGATGCCGCAGCATCATTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGCGAGGCGCGCCGCGGACCCGCCGGCGCGCGCCGGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCTGCGAGACGGCGTCTCTCAGCACAACTAAGGCGTTCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGACGAGCGTGCGCTCGTCGACACGCTTCACGAT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCGCCTGCGCCTCCGCATGCGCCCGCCATACGGCGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGCAGACGGCGTGCCAGAGGTCATCGTTGAGCGCCAG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAAGATCTCCTCGATGTCGTCCATACTCCCTCCTTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGCGAGCGCTGCGACAACCAGCGCCGTCGTCGAGAGA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTGGTGGTCCTCCTTGCTGCCCCCCGCCTTGCGGCGAGC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGAGATGATGACTCCGACTTCCATGTGGTGGTCCTCCTT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACACGGGTCGTTTTCCAACACGTGCCGCAGGCGCTG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGTCTCCGGCGCTGCCGCCGCCGCCGCCGCCGCGTCCG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTAGACGAAGTGCCTTGAGGGGAAAAGGAGCAAAGTCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACAACTATCCGTCCAACTTACTAACTCACCAACAGCCTTA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATTAGCATAAAAATAACCGCTGCTAACGCAGCCAGCAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATCTAATATAAGGATAGCGTCGTCTAATCGGGATACC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACATGACTTCCATCTCTTTTTCCTCCTTGCCCCCCCGCCT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACTCGGAGGTCGCGTCCAGCCCCTTGCGGAGCTGGACGG
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGAAACCCCGCCCGCCTTCGGCGGGGCGGGGCTGACAC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCCCCGTTGATCCCACATTGGAGGTTGCACCCCCCGAGTCGAA
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACGCCAAGGACAACCTAACTCCGTGGAGGTCCGGGTCC
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	GACCGTCGCGCGCCGCAAGCGCGGCGACGACGGCGACAGCCT
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957276.1|3168722_3171053_+|carbamoyltransferase-HypF	unknown	unknown	gnl|CDD|223146
NC_009523.1|WP_011957273.1|3166090_3166837_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011957265.1|3147485_3148643_+|thiolase-family-protein	unknown	unknown	gnl|CDD|238383
NC_009523.1|WP_011957264.1|3146546_3147473_+|branched-chain-amino-acid-transaminase	unknown	unknown	gnl|CDD|235841
NC_009523.1|WP_049767518.1|3140174_3140627_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957268.1|3160187_3161291_-|glycosyltransferase	unknown	unknown	gnl|CDD|340826
NC_009523.1|WP_011957272.1|3165344_3166094_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl|CDD|133471
NC_009523.1|WP_011957266.1|3149426_3151457_-|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009523.1|WP_049767519.1|3140595_3140973_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957261.1|3141119_3142961_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NC_009523.1|WP_011957269.1|3161293_3162640_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349930
NC_009523.1|WP_011957270.1|3162820_3163879_+|PHP-domain-containing-protein	unknown	unknown	gnl|CDD|213993
NC_009523.1|WP_011957275.1|3168056_3168713_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_049767517.1|3139785_3140178_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957263.1|3145960_3146377_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957277.1|3171079_3172099_+|dihydroorotase	unknown	unknown	gnl|CDD|235474
NC_009523.1|WP_011957267.1|3158391_3159645_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041082.1|3145688_3145997_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957262.1|3143543_3145667_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957274.1|3166917_3167943_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011957266.1|3149426_3151457_-|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	5.8e-19	63.4	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957276.1|3168722_3171053_+|carbamoyltransferase-HypF	gnl|CDD|223146	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].	0
NC_009523.1|WP_011957273.1|3166090_3166837_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.08636e-16
NC_009523.1|WP_011957265.1|3147485_3148643_+|thiolase-family-protein	gnl|CDD|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	0
NC_009523.1|WP_011957264.1|3146546_3147473_+|branched-chain-amino-acid-transaminase	gnl|CDD|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	3.83169e-166
NC_009523.1|WP_011957266.1|3149426_3151457_-|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.30192e-11
NC_009523.1|WP_011957261.1|3141119_3142961_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.0133e-95
NC_009523.1|WP_011957269.1|3161293_3162640_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|349930	cd05681, M20_dipept_Sso-CP2, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine. This family includes Sso-CP2 from Sulfolobus solfataricus.	0
NC_009523.1|WP_011957270.1|3162820_3163879_+|PHP-domain-containing-protein	gnl|CDD|213993	cd07438, PHP_HisPPase_AMP, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase (HisPPase) AMP bound. The PHP domain of this HisPPase family has an unknown function. It has a second domain inserted in the middle that binds adenosine 5-monophosphate (AMP). The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to give histidinol. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to the other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	7.06397e-14
NC_009523.1|WP_011957268.1|3160187_3161291_-|glycosyltransferase	gnl|CDD|340826	cd03795, GT4_WfcD-like, Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.	1.46223e-130
NC_009523.1|WP_011957277.1|3171079_3172099_+|dihydroorotase	gnl|CDD|235474	PRK05451, PRK05451, dihydroorotase; Provisional.	1.73934e-180
NC_009523.1|WP_011957272.1|3165344_3166094_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl|CDD|133471	cd01416, SAICAR_synt_Ade5, Ade5_like 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. Eukaryotic group of SAICAR synthetases represented by the Drosophila melanogaster, N-terminal, SAICAR synthetase domain of bifunctional Ade5. The Ade5 gene product (CAIR-SAICARs) catalyzes the sixth and seventh steps of the de novo biosynthesis of purine nucleotides (also reported as seventh and eighth steps). SAICAR synthetase converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.	8.78864e-145
NC_009523.1|WP_011957274.1|3166917_3167943_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	1.05259e-159

Protein sequences

>NC_009523.1|WP_011957266.1|3149426_3151457_-|WYL-domain-containing-protein
MNRWSRWLAAAPAVAQRLIARTHRISLPRAGSADERLRRLRRALCTPAAVRAVYATLDADVRAALADLRRCRRGLDAATFTARYGAVRPWRQLARDPQPRSVAERLLLLGWLLPRPAAPGRAPRFALAPEVRRWLPQPLRLADDGPAPPAPLPLAQRAALALLLVAAAAPLPLRRDGALRRGALRRLQPLLPDAPAPELEALCRFLLPLLEARGLVQRHGGQCTTAPGAAAFLAAPLDDQRARLVEAWLHSAAPDAWLRRLRVADSGLDAPALRRRLVQWAQALPPDRLLAPEATYDALAATFGPLADAHTHGFRVVRRPPWRRRSEARVWQAALRGPLAWLGVVAWHDGRVVRPTTWALADGAWRYGAPGEVTAPFGALDAAALTLAQGGRWVRGDAGGLTVQVAAARGVLGAQVRELLARRAGDAPDGWGTPTDEAPALRLAEGALLLADAPGDLEQALRGRSVRRYAQRLAPGVALVRAEHVAAVTRALARQGIAVAVAAGSGAAAGGALPAAPLAPGECAALLAACAYARRYAPEGLPLVIPATLEARLWQGLTPPLRAAVEAALAGIEAPEGPAADGGTDAAPLPPADPDAALRTVQRALTQQRLVTIAYDTGGEGRVTQRTVRPLALERRGDQWLLHAYCLQRRAERTFRLDRVRGCALAPPAGRWAPAG
>NC_009523.1|WP_011957265.1|3147485_3148643_+|thiolase-family-protein
MPEALIIDAVRTPIGKRGKALRDMHPVDLLGQHIAALLARTGVDPAAIDDVIAGCVSQSGEQSANIARNAWLAAGLPESVPATTIDRQCGSSLQAIHFAAQGVMAGVYDLVIAAGVESMTRVPIGASIMVGPGTPLSPGLATRYGLERGWFDQARGAEWMAREWRFTREDLDRYSLRSHRLAAEARAAGRFTAEIIPVSLTDGTHFEADEGIRPDTSADQLAALKPAFPDLELITAGNASQISDGAAATLIASPSAAQALGLRPQARFVSFAVVGVDPVTMLTGPIPATRRVLERAGLHVNDIDLFEVNEAFAPVVLAWQKEIGAPWERVNVNGGAIALGHPLGATGARIMATLLHELERRGGRYGLIAICEGGGMANATIIERV
>NC_009523.1|WP_011957264.1|3146546_3147473_+|branched-chain-amino-acid-transaminase
MSANRFAFFNGEFVPIEQAQVSVMTAALNYGLGVFEGIRAYWNADDAQLYVFHLREHMERLKRSCAIMFMELPYSVDDLCNLTIELLRREGFREDAYIRPLVFKSDHTIAVRLNNMTDAFALYAVPFGQYIPGSAVRACVSSWRRIEDNIMPSRAKVSGGYVNSALAKTEALLNGYDEAIVLGSDGQVSEASAANLYIVRHGALVTPPITSDILEGITRRVVAELAQAELGVQVIERPIDRTELYVAEEAFFCGTGAEVKPIIEIDRRPVGNGEVGSITARLVELYSTVVRGQAPTYRAWCTPVYAQQ
>NC_009523.1|WP_011957263.1|3145960_3146377_-|hypothetical-protein
MPLLIELTIIVASAALLCIYVGWGVARLALPPSLMPFRAPLTPLVGYATVLWVGFILASLALNLRWTLVVLLAGATMLNVLAWRAEGRPRPLTWLRAQPEALIPPLLALLTGILPLLSYGYLTIIGRWGEQDRSSAHC
>NC_009523.1|WP_157041082.1|3145688_3145997_-|hypothetical-protein
MGRTGSFFGALLTTLASLPLWIGYFNFGMQMSAWCLLPLALTVGLAAVDELAQRRTAAWRAALLAAIILASIPVAYYPALVVAVPLIAATGAARLLEIRHYP
>NC_009523.1|WP_011957262.1|3143543_3145667_-|hypothetical-protein
MILAALALAVPTFAAATLAILDYFEGFSFRYSLIEPKIGPDRFIGLEEIIGLTVFRLTTGGAQPPALLVGAAALAAVLLCVAGLALPSRGSGAFRWRWILAGAAITATLFWLRFGRPYEYGFMKGAAYTTCVLWGLAAHGIERLVERARRTDAVLASGAAFLILVCTGWAQALTVADHMRGPAIFTRDLVAFEPIAARLPQGAKVLLSGDETLTGPINGLLATMLYGKEIWGRVPAAYTSQSSWTPGGTPDYVVLAAREAPWPLEIGGRELWRSSVVALYDLPTDVVFLPGRSEIHRNTPVDPKSPASLAIWRRAGHNRMLTPEDPLSLNLTQRTTIHLKLASLTPQRLLVHDDESTQTLAVQAGITTVEATAGSTVRVIPEAPLALISAVLRPAVSPSPLPAAALDATQGAWSVTAEQQGNHQLVITTRLANPGRYALRYEVTIIEDTFNAPRRIVRVLGAAPLEGEWRLALDLARGASEARMNGSPTPLLEAEVAAAPPNGRYFGVLTIYSGGAAVAQAPIVVISVTDGAITTFEPVAFSVESVRAGSEPLPLPAHRRALLDGTPLICDPLRIVIEQAILERHAPPPGVTPDMPLAPGERLTVQIYWRAAADHASSAVMPMVSVQLLDDEYRKWAQWDGLTGGDWRPVPVWTPGEAVRQDVPLTLDTATPPGDYRLILVVYDLATGRPLPLDGQDAAPIGWVRVR
>NC_009523.1|WP_011957261.1|3141119_3142961_-|ABC-transporter-ATP-binding-protein
MLRTSVHTIYFALQLVWRTNWRAVVALAVVILLESPILAFQLWIGKLIIDAIVAAIGGTPISLTLIFGLVAAEGGLKILSILFQQINLVVQKRLNDQLSEKINGDILDRVNQLDLRFFETAEYYDSLARAQQEALYRPTEILLYSVQMLQSLLTLVALIVILLQFNPIIFIALFIGAFVSIFGQSRLAAWEFSVLDHQIPETRKLAYLSSLLTTSGATKEIRIFGLGNLFRTEYLNLLRKHNEEKRNVAHHRARIGLLSGTIGALIFAGVYLYLITAALRRDLSVGDLTMLTSTFFQSQIYLSSLIGTTAALYQAGLFLNHLERFMSFSPGIVSPSEPQPIVHPLERGLDLINVWFTYPEAKDPVLRNINLIIQPGEIVAIVGENGAGKTTLIKLLCRLYDPTQGVIMLNGVDIKSYDLDQLRRQYSVIFQDFVNYQATVRENIGYGYIPSLSDPELAEIKKAAERSGIHSFIQDLPRGYDTLVGKLFEEGHELSGGQWQMLAVARALVRPATVVILDEPTASLSPASEVAFFHHLKRSLSKDQIGIIISHRFSTVRMADRIIVLENGEIRENGRHEDLMAQQGIYARLYRLQAASLEEGASSLSLCSEVQNS
>NC_009523.1|WP_049767519.1|3140595_3140973_-|hypothetical-protein
MRGEGLAIEIAPCGRAAEGLAIEIAPRGRAAGRPPSWTPPRLLRGWRLEIAPRGRFAEGLAIGNRAVRAYRRASTFVDASLCAAGLAIDIAPCGRVAEGLAIEIAPRGRAAEGLAIGNRAARAFC
>NC_009523.1|WP_049767518.1|3140174_3140627_-|hypothetical-protein
MEIAPRGRSAEGLAIEIAPRGRAAGRPPSWTPPRLLRGWRLKIAPCGRVAEGLAIDIAPRGRAAGRPPSWTPPRLLRGWRLTSRRAGVPLKGWRLTSRRAGVPPGVHLRGRFPVRCGAGDRKSRRAGVPLKGWRLEIAPRGCAAGGGAGD
>NC_009523.1|WP_049767517.1|3139785_3140178_-|hypothetical-protein
MTSRRAGVSLKGWRLEIAPRGRAAGRPPSWTLLCALRGWRLEIAPRGRAAEGLAIDIAPRGRAAGRPPSWTLPCALRGWRLEIAPCGRVAEGLAIGNRAARACRRASTFVDAALCAAGLAIGNRAVRAFC
>NC_009523.1|WP_011957267.1|3158391_3159645_+|hypothetical-protein
MSRTSTERLLQQQIQTLFPRLSRHRRRALARWVLGALLAGSANRPALAPALATAGIARAATLADAWDAWIAAPAHLINTADPPAAGAPPVVRPLACGADLLRWIRAHWTGGPLVLGLDASHRRDDVVLLRMSVLYRGTALPVAWVIVPANQPGAWEPHWERMLRWARSALPRDQEVLTLADQGLWSPRLWHAIRSQQFHPIMRVRTTSTFAPTGQARQSVLRLAPGPGHGWVGVGVAFTHAPKRIAGTLAVAWGADHAEPWAPLVERSAARVDAAWYALRSWDEAGFRQSTSMGWDWQRGQVTDPDAVAWQYLVVATVTLWTVAVGTRIDDAEPQGVPPGRLRRAPPTTGAPPRRRWSGTAQRVISLLRRGAGRRLRWLLAQGRCWVRLWLRPEPLPKIGDSVTMHIYDPSQCLKSP
>NC_009523.1|WP_011957268.1|3160187_3161291_-|glycosyltransferase
MHILHIYKDYPPVLGGIEGHVRDLAEGLVARGYQATVLVTSTDRGTSIERPSPGLTVIRAARMLHLASTPLSPAMIALARGIRADIVHLQFPYPPGDLAALAAPGSPPLVISYQSDIVRQKTLLRLYRPLLALTLRRAARIITSSPGYIASSPFLRPYAAKCEVVPIGVDVTRFTPNDRRANAVPRLLFVGRLRYYKGLHFLIEALRQVEGAELWIAGNGPERTRLERQVADAGLGDRVRFLGDVADEDLPALYRQADIFVLPSHLRAEAFGIVLVEALASGLPCISTALGTGTDFVNVHNETGLVVPPGDATALAEAIRRLRDDPALRARYGQAAVHRARTLFSRERMLDAVERVYRQVVRERGQA
>NC_009523.1|WP_011957269.1|3161293_3162640_-|M20/M25/M40-family-metallo-hydrolase
MNRFDAHIEENKGRYFDELCTLLRQPSIAAQGIGIEETAMLVAQRLERLGAQVEIFRMPGAAPVVYGSIGDGARTLLVYDHYDVQPPEPLDLWHSPPFEPTLRDGKLYARGVADNKGNLMLRIQAIESWLATQGDLPCRINFLVEGEEEIGSVNLESFCQSHPELLRADGCLWETGGVNALEQPTIACGAKGICYVELVVRGAAYDLHSANATMVPNPAWRLVWALATLKAPDERVLIPGFYDRVRPPSEADMAALARIPLDDDALLADFGIPQFLGGLRGIERLKAHLFNPTCTICGLFAGYTGEGSKTVLPSEARAKIDFRLVPDMDPADVVTALRQHLDAHGFDDIAIIEYGHEKPGRSDPDSHIVRAMTTAIRVTYHKEPVIYPTMAGTGPVYPVCTAVGTPMASGCGTGYQGSQVHAPDENIRLDDYWTAMRCMGAFIQAFAA
>NC_009523.1|WP_011957270.1|3162820_3163879_+|PHP-domain-containing-protein
MYHYPGALHMHTRFSDGSGSVEDLARAACDAGLRWIIITDHDDLQAKQYEGWLHDVLVIVGHEITPPRNHFLALGIDRVIDNRLPPQTFIDQVYDAGGFGIIAHPDERVKNSFKDIYRWDDWGIDGPRHRNGRTVGIELWNLMSDWGEHLTPRNKELIYFFPRLGISGPTPETLAWWDRLNMAGRRTFGVGGVDAHAFIRQTFWGKVEVFPYRWMFGTLTNYVILPERLPLDPAAAIHTILDALANGRSYFVNRLDGDCPDLTFHAVRGAERWHPGDTASLHGGPLTFVADVGCDAEVHLIHDGRILARGLRILRHSVILPGVYRLEAYRRGMPWLYTNPVYVTGKRREGMR
>NC_009523.1|WP_011957272.1|3165344_3166094_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MNLGEKLAEGKTKIVYAHPTDPTLAIIVHKDGISAGDGARRHTIPGKGALSGRTTANVFTMLNRAGVATHFVAAPEPSVMVVYRCAMIPLEVVNRRIATGSYIRRNPDVAEGTRFDPPLLEFFLKDDARHDPQMTPDEIIAQGIASADEVEQMASESRRVFLLIEEAWAAQDVVLCDLKIEFGRDTSGRLLVADVIDNDSWRIWPGGVKERMLDKQVYRNMPVVTDEGLEQVRRLYEEVAQRTDAWVNQ
>NC_009523.1|WP_011957273.1|3166090_3166837_-|Uma2-family-endonuclease
MSASTATDPAAPHTETQLPWGVLISPPPGDLPYDDGGRMESPWHAHSAVILKAAYVAAHGGVMTDYYIGVNMFVYYSWKQIRNDEYRGPDLYVVKGVDGTKPRLYWAIWDEDGRYPDVIVELLSPGTESVDLGAKKDLYEQRFRTPEYFCIAPEVERLLGWRLGPDMRYHPLAPNEHGRLWSEQLGFWIGPWRGVYLGEEHTWPRLFHADGSLVLLPEEAERQRAEALAARVAALEEELARLRKRSDR
>NC_009523.1|WP_011957274.1|3166917_3167943_-|phosphoribosylformylglycinamidine-cyclo-ligase
MTVYREAGVDIDAAARARQLMAEAVRSTYSAAVLAGIGAFGGCFDLHAAVGDQTDDVVLVASTDSVGTKTLVAAALGRYETLGYDLVNHCVNDILVQGARPLFLLDYLAVDRLDPQRAATLVASVAAACREVGCVLLGGETAQMPDVYREGAFELAGTIVGVVRRAQMLPRNVAAGDVILALPSSGLHTNGYSLARRVLGRGSAWGYDARPAELNGRSIGEALLEPHRVYLRAFEQLEAAGVAVHAMAHITGGGIYENLPRVLPEGCGAVIRRRTWTIPPICTLVVQAAGLDEREAFRTLNMGLGMLVIVPSDAADAARRAVPEASPVGEVVTGGDVRLID
>NC_009523.1|WP_011957275.1|3168056_3168713_+|hypothetical-protein
MAQKTSNHRPGLLDRLLRIERSESHDHIESEVVELQNVSIGSVDAQKATVSRALVRAVTAQDDVAMTLSSALSVRAGGDVSMAGSASPLVMAARDVRLNNSSAAVMTAREARVESGMVGVLLAGSATLGDQTRVVLSGRDALLFGAAIGIFFPLVAYLLRRFAPPPKEQEPRPWYTRAGLWALRQTIVLGGAALLGWVAYRTLRNRVMRLLPGMMIHR
>NC_009523.1|WP_011957276.1|3168722_3171053_+|carbamoyltransferase-HypF
MESWQQSVVARRRLVVRGIVQGVGFRPFVYGLAQRFGLGGFVFNDSDGVTLEIEGSVSALDAFEQTLRSAPPPLARIDAVIATTVAPRGETSFHIETSRAAAARNALISPDVATCDDCLRELFDPNDRRFGYPFINCTNCGPRFTIVLDVPYDRAQTTMRVFPMCPACQAEYDDPLNRRFHAQPNACAVCGPSLTFHWWSPAPLPNLPAAASPLEQAVFALAHGAILAIKGLGGYHLACNALDHDAVARLRARKQREARPFALMAPDLATIRQLCYVKPEEATLLEARQRPIVLLDALPGAPVAPSVAPGYTTLGIMLPYTPLHHLLLRAYAAAMPDQPAVLVMTSGNLSDEPIAYRDDDAAVRLRSIADGALTHNRDIHMRCDDSVARIVAGGVQLLRRSRGYAPEPVTLTLNVPKPILATGGHLKNTFCLAKGRDAFLSHHIGDLENLETLTSFREGVRHFARLFDCEPEVVAYDLHPEYLATKEALASDIPLKIGVQHHHAHIASVLAEHGIAGPVIGVAADGTGYGLDGAIWGCEVLIVDLRDFTRFAHLAYVPLPGGDAAVRQVWRIGATYLHRAFGNGFLDLDIPFVRRIDREQWRLIARMIERGINAPPTSSLGRLFDAIAAIAGIRDVALYEGQAAIELETTATPDPHPYPFALLPGTPMRIDVTPTIHAIVEDIRAGAPVARVGGRFHCTVADMLAQACEQARATGAPDVVALSGGVFQNRHLTELLVQRLERAGFRVLLNRRVPPNDGGLCLGQAAVAAARLLEQG
>NC_009523.1|WP_011957277.1|3171079_3172099_+|dihydroorotase
MEHTLISPLDMHIHFREGAMLQTVAPLSAHDFAGGVIMPNLVPPVDNLERLLHYRAEIDAAISGTGFTPYMTLFFRAYSEAELRAARPHIIGIKLYPAGVTTNSQAGVQRIRDAEPTLATMEELGIPLLVHGETSGFVLDREREFLPIYAHLARRFPRLTIVMEHITTREAVALLDEHPNLYATITLHHLQITLDDVAGGLLQPHLFCKPIAKRPEDRDALLRAALAPHPKVMFGSDSAPHPVSAKEAAACAAGIFSAPVALPLLTEIFAQHDALDRLQTFVSDNAQRIYGITPPQKTVLLRREEWSVPLRYGDVTPYRAGCTVAWRVVMSRYDPVGHS

Crispr_ID: NC_009523_59

• CRISPR_ID: NC_009523_59
• CRISPR_location: 3194362-3194546
• CRISPR_type: TypeIII-C
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cmr3gr5,cmr5gr11

Consensus repeat of NC_009523_59

Consensus_repeat	Method
ACTTATGCGGGCGAGACGTCCGCGCACCCAGGCGGCGCTTGGGCG	CRISPRCasFinder

spacers of NC_009523_59

>59.1|3194407|95|NC_009523|CRISPRCasFinder
AGCGAGACCCGCGCACCTGGTTGTCACTTATGCGGGCGAGACGCCCGCGCACCCAGGCGGCGCTTGGGCGGGCGAGACCCGCGCACCTGGTTGTC

CRISPR arrays and Neighbor proteins around NC_009523_59

CRISPR arrays

The CRISPR arrays of NC_009523_59

>merge|NC_009523|59|3194362-3194546|CRISPRCasFinder
ACTTATGCGGGCGAGACGTCCGCGCACCCAGGCGGCGCTTGGGCGAGCGAGACCCGCGCACCTGGTTGTCACTTATGCGGGCGAGACGCCCGCGCACCCAGGCGGCGCTTGGGCGGGCGAGACCCGCGCACCTGGTTGTCACTTATGCGGGCGAGACGCCCGCGCACCCAGGCGGCGCTTGGGCG

>NC_009523|59|56|3194362-3194546|CRISPRCasFinder
ACTTATGCGGGCGAGACGTCCGCGCACCCAGGCGGCGCTTGGGCG	AGCGAGACCCGCGCACCTGGTTGTCACTTATGCGGGCGAGACGCCCGCGCACCCAGGCGGCGCTTGGGCGGGCGAGACCCGCGCACCTGGTTGTC
ACTTATGCGGGCGAGACGCCCGCGCACCCAGGCGGCGCTTGGGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957301.1|3195534_3199086_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|226415
NC_009523.1|WP_011957291.1|3187604_3188381_+|IclR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224332
NC_009523.1|WP_011957303.1|3201461_3206606_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|378942
NC_009523.1|WP_011957298.1|3193233_3194064_+|2-hydroxypenta-2,4-dienoate-hydratase	unknown	unknown	gnl|CDD|132264
NC_009523.1|WP_011957306.1|3210505_3212119_-|amidohydrolase	unknown	unknown	gnl|CDD|238625
NC_009523.1|WP_041333670.1|3206598_3206796_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957294.1|3190309_3190855_+|flavin-reductase-family-protein	unknown	unknown	gnl|CDD|214900
NC_009523.1|WP_011957290.1|3186440_3187448_+|catechol-2,3-dioxygenase	unknown	unknown	gnl|CDD|274480
NC_009523.1|WP_011957295.1|3190867_3191080_+|2-hydroxymuconate-tautomerase-family-protein	unknown	unknown	gnl|CDD|238274
NC_009523.1|WP_011957307.1|3212115_3212949_-|hypothetical-protein	cmr3gr5	mkCas0067_cmr3gr5_CAS-III-C	gnl|CDD|377130
NC_009523.1|WP_085979432.1|3191794_3193252_+|aldehyde-dehydrogenase	unknown	unknown	gnl|CDD|143412
NC_009523.1|WP_011957308.1|3212945_3213362_-|hypothetical-protein	cmr5gr11	mkCas0060_cmr5gr11_CAS-III-C	unknown
NC_009523.1|WP_011957296.1|3191063_3191798_+|4-oxalocrotonate-decarboxylase	unknown	unknown	gnl|CDD|226480
NC_009523.1|WP_011957299.1|3194050_3194266_+|hypothetical-protein	unknown	unknown	gnl|CDD|224853
NC_009523.1|WP_011957304.1|3206798_3207227_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957300.1|3194896_3195421_+|type-1-glutamine-amidotransferase	unknown	unknown	gnl|CDD|153228
NC_009523.1|WP_011957292.1|3188362_3189280_+|acetaldehyde-dehydrogenase-(acetylating)	unknown	unknown	gnl|CDD|236227
NC_009523.1|WP_011957305.1|3207888_3210489_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|225669
NC_009523.1|WP_011957302.1|3199847_3200891_+|hypothetical-protein	unknown	unknown	gnl|CDD|237865
NC_009523.1|WP_011957293.1|3189276_3190293_+|4-hydroxy-2-oxovalerate-aldolase	unknown	unknown	gnl|CDD|181282

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011957308.1|3212945_3213362_-|hypothetical-protein	cmr5gr11	mkCas0060_cmr5gr11_CAS-III-C	3.8e-47	154.5	0.2
NC_009523.1|WP_011957307.1|3212115_3212949_-|hypothetical-protein	cmr3gr5	mkCas0067_cmr3gr5_CAS-III-C	8.6e-84	276.0	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957301.1|3195534_3199086_+|AAA-family-ATPase	gnl|CDD|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	1.2978e-26
NC_009523.1|WP_011957291.1|3187604_3188381_+|IclR-family-transcriptional-regulator	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	8.34767e-78
NC_009523.1|WP_011957303.1|3201461_3206606_+|tetratricopeptide-repeat-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.9301e-17
NC_009523.1|WP_011957298.1|3193233_3194064_+|2-hydroxypenta-2,4-dienoate-hydratase	gnl|CDD|132264	TIGR03220, 2-hydroxypenta-24-dienoate_hydratase, 2-oxopent-4-enoate hydratase. Members of this protein family are 2-oxopent-4-enoate hydratase, which is also called 2-hydroxypent-2,4-dienoate hydratase. It is closely related to another gene found in the same operon, 4-oxalocrotonate decarboxylase, with which it interacts closely.	5.64116e-90
NC_009523.1|WP_011957306.1|3210505_3212119_-|amidohydrolase	gnl|CDD|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	3.45339e-142
NC_009523.1|WP_011957294.1|3190309_3190855_+|flavin-reductase-family-protein	gnl|CDD|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	3.00895e-46
NC_009523.1|WP_011957290.1|3186440_3187448_+|catechol-2,3-dioxygenase	gnl|CDD|274480	TIGR03211, catechol_2_3, catechol 2,3 dioxygenase. Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase. [Energy metabolism, Other].	1.91634e-145
NC_009523.1|WP_011957295.1|3190867_3191080_+|2-hydroxymuconate-tautomerase-family-protein	gnl|CDD|238274	cd00491, 4Oxalocrotonate_Tautomerase, 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.	3.08356e-13
NC_009523.1|WP_085979432.1|3191794_3193252_+|aldehyde-dehydrogenase	gnl|CDD|143412	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.	0
NC_009523.1|WP_011957296.1|3191063_3191798_+|4-oxalocrotonate-decarboxylase	gnl|CDD|226480	COG3971, COG3971, 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism].	8.80567e-29
NC_009523.1|WP_011957299.1|3194050_3194266_+|hypothetical-protein	gnl|CDD|224853	COG1942, COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog [General function prediction only].	0.00992478
NC_009523.1|WP_011957307.1|3212115_3212949_-|hypothetical-protein	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	0.000240188
NC_009523.1|WP_011957300.1|3194896_3195421_+|type-1-glutamine-amidotransferase	gnl|CDD|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	1.117e-74
NC_009523.1|WP_011957292.1|3188362_3189280_+|acetaldehyde-dehydrogenase-(acetylating)	gnl|CDD|236227	PRK08300, PRK08300, acetaldehyde dehydrogenase; Validated.	0
NC_009523.1|WP_011957305.1|3207888_3210489_-|ABC-transporter-permease	gnl|CDD|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	6.01951e-18
NC_009523.1|WP_011957302.1|3199847_3200891_+|hypothetical-protein	gnl|CDD|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	0.000163377
NC_009523.1|WP_011957293.1|3189276_3190293_+|4-hydroxy-2-oxovalerate-aldolase	gnl|CDD|181282	PRK08195, PRK08195, 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated.	0

Protein sequences

>NC_009523.1|WP_011957299.1|3194050_3194266_+|hypothetical-protein
MPLLEVLYASDEPLSLERKRAFAREAVAIFHEVLGTPPGRLRLVIHHLKPDDSLGLLEDGDAGEAPQGTDR
>NC_009523.1|WP_011957298.1|3193233_3194064_+|2-hydroxypenta-2,4-dienoate-hydratase
MPEQSVGGMDIEAVARRLDAAWEQRQPIAPLSESMVLTADQAYAVQTRWTELRQARGERVVGRKIGLTSRAIQQQLGVNEPDYGSLWESRYFPAVDGRVDVPADLFVQARVEGELAFLIGRSLREPGVTLQDVLAATEAVAAAIEIVDSRIADWRIKLVDTVADNASYGGFTLGPWSRAMRNVDLRTVGMLLHHNGEPVVQGIGAAALGHPARAVAWLANKLISFGVSLEPGDIVLSGSLGPAIPIRAGDVFTLEMHGQPPLSMRFVEEKMGNATP
>NC_009523.1|WP_085979432.1|3191794_3193252_+|aldehyde-dehydrogenase
MMDHPSFHVQHYIDGAFVEGTRRFEIFYPATNQVIGSAPEGREEEVDAAVQAATRAFASWGRASAAERRRVLRAFADAIRAHTAELELIETWDVGRPIRENRAGYVQRLAANIEFFADVAVTHGSEAYPMDSGYINYVLRHPVGVAALITPWNVPMLQATWKIGPALAFGNTVVLKPAEFTPIGAWKLAQIAHSAGLPPGVLNVVHGFGPESAGALLTQHPGVHLISFTGESGTGKTIMGVAARTLKRLSFELGGKGANIIFADADLDRAVAISLRSSFFNQGEFCLAGPRLLVERPIYDRFLQRFIAATQQLRVGDPMDPETTVGALIAPEHLQRVSSYIDIARGTQAEIVLGGDRPNLPAPFNRGNFLNPTIIVGVQPQDRVCQEEIFGPVVTVAPFDGEDEAIAIANGVAYGLSAVVQTRDVGRAVRVAGAIDAGTVWVNDFFVRDLRVPFGGMKQSGIGREGGHYSLEFFTEAKTVCLSNQ
>NC_009523.1|WP_011957296.1|3191063_3191798_+|4-oxalocrotonate-decarboxylase
MELSADALALLEDVRQARASRRTIVSRGGARGVDLAAAYAIQAALGEGLPVKGYKLGLLSPAKQAQMGIDSPIYGRIYPAMMLESPVRLTRFIQPHVEPELAAVLRAPVMPDATPGAAAAAIGGWFLGVDLLDSVWEGYRFSAAEVVADNSSGGGFLIGGRLIDQQPNGVLRLYLNGTLRAEGDLRALGDLHERLCWLATMVGGLSAGQVVFFGSPAAATPAEPGALEVIGPGADCLIARLEAE
>NC_009523.1|WP_011957295.1|3190867_3191080_+|2-hydroxymuconate-tautomerase-family-protein
MLVLRVTMVEGRTAEQRATLMQRLSECAARHFDLPLEEVRLVIYEIPKTHWGVGGRSLAEREGASHGTER
>NC_009523.1|WP_011957294.1|3190309_3190855_+|flavin-reductase-family-protein
MTAPTDIAPVASVPFDSRQFRATMGKFATGVTIVTTYHEGQSHGMTANSFLSVSLDPPLVLVSVATRARLHALLAPGCHYGVSVLADDQEALSRHFAGRPIEGLHIPFVWKHGVPLIDNALAHVVARVVDAHPAGDHTLYIGQVEYLSSRDGPPLLFFAGKYGRMETISDAGAEGPFWYLW
>NC_009523.1|WP_011957293.1|3189276_3190293_+|4-hydroxy-2-oxovalerate-aldolase
MNAPRLTDTTLRDGSHALAHTFTRQQVRDIVRALDRAGVPVIEVTHGDGLAGSSLQYGFSRVPDLDLIAEARETAERARIAALLLPGIGTRRELRAAVERGVQVLRIATQCTEADISEEHFKMAKDMGLETVGFLMMSHMRPPEFLAEQARLMESYGADCVYVVDSAGAMLPHDAAARVQALKAALTVQVGFHAHNNLGLGIGNTLAALEAGADQIDGCLRGLGAGAGNAATEVLAAVLDRLGINPGLDVLALMDAAEYVVAPIMPFQPFPDRDAITIGYAGVYSTFLLHARRIGEQLGVDPRAILIELGRRQTVAGQEDWILDVALELVRQQQTTPV
>NC_009523.1|WP_011957292.1|3188362_3189280_+|acetaldehyde-dehydrogenase-(acetylating)
MGDETIKVAILGSGNIGTDLMYKLLDHPGSMELVLLAGIDPHSEGLARARSLGVATSDQGIAAVLERPEIQIVFDATSAKAHVRHAKLLHETGRIAIDLTPAARGPYVVPPVNLTQHLDALNVNLITCGGQATIPLVYAVSRVTPVCYAEIVSTVASRSAGPGTRQNIDEFTFTTAHGLEVIGGAQQGKAIIILNPAEPPILMRNTVYAIPAGDFDPAQVRDSIEAIVAEVQQYVPGYRLTNPPVFNMRETPWGRKPVVTALLEVEGAGHFLPTYAGNLDIMTASARRVGEVFAQQLLSRREVLV
>NC_009523.1|WP_011957291.1|3187604_3188381_+|IclR-family-transcriptional-regulator
MLQTLQKAVEVLSLFSPTHPEWTVGDIARALEQPKSSTSELLSSMAGQGLLRRTGPGRYRLGWRLLEFGQTLLKTTEFRAEARQVMEEVVARWGETMHLAVLENGQVIYIEKLEGTHAVHISLSGVGARLPAHCSGVGKVLLAHAPWSEVAQILEQQGMQAFTPNTITTPEELARELDQVRQRGYACDQEEISIGLCCVAAPIYNFEGRVIAAMSISLPTHRFQAQRAGYVALIVEAAQRVSENLGYHRGMPRWAMKR
>NC_009523.1|WP_011957290.1|3186440_3187448_+|catechol-2,3-dioxygenase
MTDHKEPIFDVAQLAHVEILTPKLNDTLWFFKDLLGLEETERSGKSVYLRAYEDYYHHSLKVTEADQPGLGHVAWRVTSPQALERRVQAIEAVGLGRGWIDGDHGHGRAYQFTTPDGHMMELFWDVEYFQAPETMRTELLNRPQKRPLRGVPVRRIDHVNLLCQNVTPNKQFLMDQLGFRLREHIILNDGSEAGAWLSVSPLVHEIATMRDATGAKGRLHHICYWYGIPQHLSDIADVFSDYGITIEAGPGKHGISQALFMYVFEPGGNRVELFGDAGYLIFDPDWKPITWHESNLAKGIIWFGSPLPAEYFMYGTPPVQKESQERAEEELVGAN
>NC_009523.1|WP_011957300.1|3194896_3195421_+|type-1-glutamine-amidotransferase
MRLAGRRIAILLAEGVEDLEFYVPLMRLQEEGAEVVAAGLDMRPVRGKNGLEITPTATVADLRADDLFALVIPGGWAPDKLRRYPAVTDLVRAMDEAGKVIGIICHGGSVAISAGIVRGRPATGSTGIKDDLINAGATWVDAAALRDGHLVWGRVVADIPAFCRELVAALVERA
>NC_009523.1|WP_011957301.1|3195534_3199086_+|AAA-family-ATPase
MASIPPSFRIILLGDIRFEVAEAHTVLPQRESLRRLAVHLALQPRQPLARKQLAFTLWPDDDPASALANLRRHLHLLRTLLPPVAREWLVVSSQHVVWNAPPDCYVDVHAFEREWATVQDMEAAAGLYRGELAPGIDTDDDILVRREELRQRYLALLRSLAHAWMERGDWDRAGRWARRLVTHEPWDEDAVRLAMTAMARAGNRTAALDMYQTLARDLQRELHVQPAPETTALYHDILHRRLTCAAQPDRSTVPVFIGRADELRQLTDLMRSAVQGQGRIVFVSGQPGVGKTSLVQEAIRRFVDLNKAQPVHVFYGYCQPMSNARDDRPYAPWRHILTAAATHLAQSAGSAAEWLSRLLPLVPDLAALRPELIASSQPDAAALCSAIRRSVQALALRRPLFLIIEDVHWIDTWSLDALIDLADVCLSLPLLIIVTHRSGFMMPSLLSAKRTLRRQRCAFDLHVQPLTPSEANRLLEQALGSAIDAATLEEIRRYAGGIPLFLREAIDSLRESQQQRLSKEKGLAGLRDSLRLRLRDIGERNRHMLEAAAILGFSFADDELRHMLNWLPSAYASALDDLIARRLLIDTVTHGSDEYTFSHHLIHHLILSDIPAERAAHLHEQAARSLEMVHAGRSGYAARIATHYETAGCALAAARFWMVHARESTDLAAFDQALKSVAHAESLLAGTSREVREVQAQAAVQRGVIALHRGETASALSLLQHAIERSRAFPSLYMYALVTHAYALSTRDHAEEAYATASQALELATLLHDTASIVRALNIRGVSALMLGRVHDAIEDLQHACASIDQMRQDDADLRSVVAQTTQSLNHLGTALVFAQEYTQARKILDQTVAMAQHSGLRRLEAAALTMIGQMTLNCGRYDDAVQIYTRSIDVAGESYKPGMWGKYAGRGWAYVRMGECAAARQDFTLGLQVAEQVNSQYGTLLMQTYLTFVDLAQGRMPAMSLTHLAALASDAQIHPVVYIASLLAGHLWRLLGDPHRAMEMHERALQAAYAANVPSFVLHARAQQVCDQLLAAPDAAGFAGADAIIEQARCADERPIQSLGWLARAGGLFRLGQIDEAVLSVEKGVIMARACPDQPLIGEGLALLTQIRAASDRSAAYNAELAEARLIAERYFAPLAIPLTMPQAHALRRMCLEVLLPSSAQCVSASNQPAVINVSRKRRAMS
>NC_009523.1|WP_011957302.1|3199847_3200891_+|hypothetical-protein
MQRTAHHLLLLLAVLFILSACTSGGGAGAPTQPPAGNATTPTQPPAGNATTPTQLPSAASPAPTQAPVAAGPINPRTSEPCAVLNAEAMAGIVGSSLITTVPLKSGFILTCSYEFGDQKRIDFEMDLLNPGKEAYDRVIASQATSGATVEPVNLGDVAAVKERSGDVSLYMVVNGWYAVLYGYGIERQTVIDIGRLLTDRVIAFTPTSLGDLVPTPVPQPGTLIGMEVVIETPKEMAGVTTLESLKIVSIAGFAMCSSTPLADPFIVTFIAPPGQDPPTPVGSFSLVVNGGVTVNQPTPARIDVGLGRSDAAEMRGGEGTVIVAADGKSGTFEAGQIKGRWTCTVSE
>NC_009523.1|WP_011957303.1|3201461_3206606_+|tetratricopeptide-repeat-protein
MPITISFQRTAIDRVEAQIDAQLAASFEPAALMVDQPLFSQRPAPADPRAYGQRLFAALGGDTFRAALARLPRAPHMDSLIAIQTADAELASIPWEYLHDGADFLILNYLLVREVPDAPLPAPPAPDLPWRLVVMGSDPLVQEVRDPKTGLFTGYAPMQRLKVVQELDLLRDDLLRQNPPAPIRWQRIAPTRQALIDDLDPREPILFHYTGHGDVENGAPVLCFDDGTGCMDPRPVNDLAADLRGLVYLAFLNACRTADSREPGANLALALVQHGIPAVLGTQYQVLDEAAAHVARTFYRLLASGQHPAQALYRARLQLKNQFRSEPREWAIPVLYLAQNYAWQVQRPVLNEPLRPLEPPVPHTTQLRAPDQSAGRFVGRNKELLDLARLFINEQRRIVTIRGAGGMGKTALVNALAERLRFHFRDGIVAVSLFLPGENAPLRAAQVRRDLATLLGLQHPAFDLPDAVKEQELALVEAARARPRLLLIWDNYETVLWRLGREASDPSSAPFDEAQRTEAAAVQRLVRLLADKGVHLIFTSRQSPVGLAGETFYPPAERGHQLGGLDPNDSVRLLRMRVGQRLPSTTFLEQLAAAVGYNPLAMNLAAARWANSQDDEPTFIANLRDELSKARDPAAPMYQQSSVEINVRLSLNALPADLRADLLALTIIANPVIIPRHGAVIWGLEDETQWFDDQAHTRLEQLHQASLLQGQGYDEQRNRAHAYSLHPLIASVLSRLAQELDLSDARARYAAWSDHLVSRAYDPEHGIDADPAVAAQTQFLLADIAAAVPYLPPEQRGWAAWRAASVFERLGQPEQAYQSITLAEATARETENQELLSRVYHQRATLLETRGDLDGAMRLYEQSLAIQESLGDVRGTSATLHAMAGVLVTRGDLDGAMRLYEQSLAIKESLGDVRGKSATLHQMAGVLVTRGDLDGAMRLYEQSLAIQESLGDVRGKSATLHQMAGVLVTRGDLDGAMRLYEQSLAIKESLGDVRGKSATLHAMAGVLVTRGDLDGAMRLYEQSLAIQESLGDVRGKSATLHAMAGVLVTRGDLDGAMRLYEQSLASDESLGDVRGTSATLHNMAHVLETRGDLDGAMRLYEQSLAIQESLGDVRGKSATLHAMAGVLETRGDLDGAMRLYEQSLAIKESLGDVRGTSATLHQMAGVLVTRGDLDGAMRLYEQSLAIQESLGDVRGKSATLHQMAGVLVTRGDLDGAMRLYEQSLAIQESLGDVRGKSATLVMMAQIQFARGDHETALRNARESLRLLQAMGAAPDAAKVAEIVQQMEAALAGGASPQPAAFTPARLVGALIGAVVRVQRGQMPAADLRADLERLSAEATLTPITTALLAALDGAADAAATLLVAAEPLLAQGAAAERADALAGIGNLAALLDDHATELRAREAAVAAFRAAGDDRQSLVNLSIALYNLAMLYARQGNHAAAVPLLEEVVALDERTGHPDLASDRAKLEEMRRHAAGLPEVSLVDVIAEWRDGDRDHEQFVNLLNLVCNLYVQTMSDGSSDQRERLAEDLAHLRAIRPLPVAGANDFLAVLQLRLRDEPGMTERAARIAATLPAQLAQALAMMDQAISGEPVAPPADSDEQEAAAAMAAMLSGLPPEQRAELQILAQVVPLVLHGIGLLRQPDLTAAERGRFAEVLEQAASQAETGETAGSPWLAAAGVLRQVAGWLKGAPAAPDTLPEPYRSLVMRMLEGAGDE
>NC_009523.1|WP_041333670.1|3206598_3206796_+|hypothetical-protein
MSNDETERYTCPKCGYLNVWTRNEILQRGQEVIYRGDDEVVYSLRCKNPAGCNERMRIAVKRREK
>NC_009523.1|WP_011957304.1|3206798_3207227_+|hypothetical-protein
MRILGPETADERELREWFESQERGNIERLEAGAQTIIQLVTGLYGVLFAVLALSDQPAYLQNPIVQWAGTVGVCAFFGSLLAAMLVAIPRRVVYQKDNLTEMQRMYGRLQRRKATLLRTAQIVFLIGTACLVTVILAILWKV
>NC_009523.1|WP_011957305.1|3207888_3210489_-|ABC-transporter-permease
MPLTLLKTSIRYIVRHPWQFGLAILGVALGVAVVVSIDLANDSARRAFLLSTETLTGRTTHRITGGPSGVPEEVYRRLRLELGVRLAAPLVEGEAVARDRSGLTLRILGIDPVVEAPFRPWITGASGDNAGLDRTPSAQEGCQGFGCYSILMTRPNAALISAETAREAGIVSGARLPLMIGATTVEAEIVGLLEPADDASRRALDGLLIVDIATAQEWMGSVGRLSTIDLIIPDGAEGEALVQRMTAVLPPGVRIERPEERSNAVQQMTAAFELNLSALSLLALVVGTFLIYNTMTFSVVQRRGMIGTLRCIGVSQRQILALTLGEALLIGLIGALAGLALGVALGRGLVGLVTQTINDLYFAVTVRSVDVAPGVLLKGFALGVAATLAAAAVPAAEATLTPPRTVLRRSSYEDRARRAVQLAALAGVALMLIGLGLLTVPGRSLTLSFGGLLALTVGAAALTPLVMQGLATVTRPVAGRIFGLLGRMAARDIVASLSRTSVAVAALMIAVSVTIGVGLMVSSFRTTVERWLENTIRADIFVSAPSARGNRLDSPLPEEAIQRILEAPGIERYRRYRSATIESSVGPLLTIALDVAPADHRVFQWVGAVDESAVWQAFAGGAALISEPLAYRHNLCPGDTLTLLTDRGERQFPIAGVFYDYGSDQGVAMIDLAVYRELWDDQRLSSLGLYVAPGVDVDELVRDLRARMPPGLAVNIVSNRGLRETSMAIFDRTFAITTVLQLLATIVAFIGILAALMALQLERARDMGVLRANGLTPRQLWGLVIGQTELMGLFAGVLAIPVGVMMAAVLVYVINRRSFGWTLLFELNGALFVQAVAVAVVAALLAGLYPAWRMGRTSPALALREE
>NC_009523.1|WP_011957306.1|3210505_3212119_-|amidohydrolase
MKTPRLILTGATVYPIIAEPIRDGAVAIGDDRILAVGRSEAVEALAGASTRVVRLPPEYAVLPAFHDSHQHLLSYVRSRTRVPLWDTTSIPALLERLRAAAERRPAGSWIVAVGHDQGRLAERRHPTLAELDAAVPAHPLLVYRACNHMALANSMALARAGVTPATPDPPGGRIERDDHGNLTGVLLEAAMSLVAGAVEAPAIDWQSGLRDAAREYHRRGIVAVGEAALGHVNGVRDLEIVADAIRGGGIGLRMYVMAYGDVAAQMLEAAEAGAWREVWRDDGWLRFGAIKYFADGTLGGGTAWLTEEYGDEPGNRGFPLLAAEELDARVLRAHRAGFQVAIHAIGDAAVTMALDAYERALTVLPRSDHRHRIEHVEVIHPGLPERFARLRVVAAIQSCFTFWEEGDVTRLGPELAPWGHAWGALQRAGVVLANGSDNPVLPDFAPLQGIAAAVTRMAHNGRRIAPHQAIGLMDAIRSYTWGSAYAAFAERDQGALAPGRYADIAVLSESLLDVEPERSARVPVVMTVAGGTVVYEQ
>NC_009523.1|WP_011957307.1|3212115_3212949_-|hypothetical-protein
MNWIGYRVVFRLHSPLHIGWRKVGNVQVTRPYLTGRSFWGALTERLARDTAAQKGQKATTSNDYHESGHQVNEYLAFTYFYPALQSGNDYQVVWPWDDERTFRRRFLSSYQSTALVYPEHSAAEGSLHEIEFLSPHTLDTADPVYLIGYVFAHKDCSLPWHDALTRLQFGGERGYGWGKTELVSLEKTDDAFSCTVDCSGRRPVITVPQDKRLLAHTKPDQIMIAGEVEPLVGREWHTNSGAGASITHFGVVYAPGGIATNEHCFAVESFGLWQKQP
>NC_009523.1|WP_011957308.1|3212945_3213362_-|hypothetical-protein
MTNTTSINLDYLAAKYAQTIIQKTKDKKASDIENTITKALGVLQEDGVYACFLYLLAREKENGAVVVDEMLNLLSSLPFGWQKPTNNSEILPFISEQVTKDLDRLLLAREVLEQMLIYARYGAKARDKGGSEAPGESS

Crispr_ID: NC_009523_60

• CRISPR_ID: NC_009523_60
• CRISPR_location: 3282751-3282880
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_60

Consensus_repeat	Method
GGGCAAAGCCCGCCTGCGCGGAACGCGAACTCCAACGGTGACCCT	CRISPRCasFinder

spacers of NC_009523_60

>60.1|3282796|40|NC_009523|CRISPRCasFinder
CTCGACCATTGGCTATCGGTTATCGGCTATCGGCTCTGTG

CRISPR arrays and Neighbor proteins around NC_009523_60

CRISPR arrays

The CRISPR arrays of NC_009523_60

>merge|NC_009523|60|3282751-3282880|CRISPRCasFinder
GGGCAAAGCCCGCCTGCGCGGAACGCGAACTCCAACGGTGACCCTCTCGACCATTGGCTATCGGTTATCGGCTATCGGCTCTGTGGGGCAAAGCCCGCCTGCGCGGAACGCGAACTCCAACAGTGACCCT

>NC_009523|60|57|3282751-3282880|CRISPRCasFinder
GGGCAAAGCCCGCCTGCGCGGAACGCGAACTCCAACGGTGACCCT	CTCGACCATTGGCTATCGGTTATCGGCTATCGGCTCTGTG
GGGCAAAGCCCGCCTGCGCGGAACGCGAACTCCAACAGTGACCCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957354.1|3270539_3271520_+|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|176645
NC_009523.1|WP_011957360.1|3278640_3278922_-|DUF507-family-protein	unknown	unknown	gnl|CDD|367914
NC_009523.1|WP_011957369.1|3287902_3289012_-|phosphoglucomutase	unknown	unknown	gnl|CDD|100093
NC_009523.1|WP_011957368.1|3286688_3287876_-|hypothetical-protein	unknown	unknown	gnl|CDD|211689
NC_009523.1|WP_157041312.1|3290551_3291982_-|O-antigen-ligase-domain-containing-protein	unknown	unknown	gnl|CDD|377422
NC_009523.1|WP_041335414.1|3278937_3280173_-|lycopene-cyclase-family-protein	unknown	unknown	gnl|CDD|130850
NC_009523.1|WP_011957357.1|3274328_3275228_-|RluA-family-pseudouridine-synthase	unknown	unknown	gnl|CDD|223638
NC_009523.1|WP_011957370.1|3289033_3290443_-|phosphomannomutase/phosphoglucomutase	unknown	unknown	gnl|CDD|100091
NC_009523.1|WP_041333694.1|3283783_3284005_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957359.1|3276138_3278640_+|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl|CDD|381604
NC_009523.1|WP_011957362.1|3280181_3281282_-|aminopeptidase	unknown	unknown	gnl|CDD|376723
NC_009523.1|WP_011957372.1|3292068_3293721_-|cellulase-family-glycosylhydrolase	unknown	unknown	gnl|CDD|380087
NC_009523.1|WP_011957363.1|3281274_3282300_-|YvcK-family-protein	unknown	unknown	gnl|CDD|132873
NC_009523.1|WP_011957366.1|3284200_3285172_+|hypothetical-protein	unknown	unknown	gnl|CDD|173835
NC_009523.1|WP_011957355.1|3271705_3272971_+|glycosyltransferase	unknown	unknown	gnl|CDD|340830
NC_009523.1|WP_011957373.1|3293855_3294524_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NC_009523.1|WP_011957367.1|3285291_3286665_-|hypothetical-protein	unknown	unknown	gnl|CDD|274907
NC_009523.1|WP_011957356.1|3272987_3274325_+|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009523.1|WP_011957358.1|3275335_3276109_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011957364.1|3282970_3283756_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957354.1|3270539_3271520_+|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl|CDD|176645	cd05282, ETR_like, 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain.	1.09051e-145
NC_009523.1|WP_011957360.1|3278640_3278922_-|DUF507-family-protein	gnl|CDD|367914	pfam04368, DUF507, Protein of unknown function (DUF507). Bacterial protein of unknown function.	1.4381e-06
NC_009523.1|WP_011957369.1|3287902_3289012_-|phosphoglucomutase	gnl|CDD|100093	cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.	7.99337e-42
NC_009523.1|WP_011957368.1|3286688_3287876_-|hypothetical-protein	gnl|CDD|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	6.46907e-42
NC_009523.1|WP_157041312.1|3290551_3291982_-|O-antigen-ligase-domain-containing-protein	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	2.72795e-10
NC_009523.1|WP_041335414.1|3278937_3280173_-|lycopene-cyclase-family-protein	gnl|CDD|130850	TIGR01790, Uncharacterized_carotenoid_cyclase_DR_0801, lycopene cyclase family protein. This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.	8.58791e-122
NC_009523.1|WP_011957357.1|3274328_3275228_-|RluA-family-pseudouridine-synthase	gnl|CDD|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.04119e-65
NC_009523.1|WP_011957370.1|3289033_3290443_-|phosphomannomutase/phosphoglucomutase	gnl|CDD|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NC_009523.1|WP_011957359.1|3276138_3278640_+|transglycosylase-SLT-domain-containing-protein	gnl|CDD|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	8.63618e-58
NC_009523.1|WP_011957362.1|3280181_3281282_-|aminopeptidase	gnl|CDD|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	6.06461e-134
NC_009523.1|WP_011957372.1|3292068_3293721_-|cellulase-family-glycosylhydrolase	gnl|CDD|380087	pfam17996, CE2_N, Carbohydrate esterase 2 N-terminal. This is the N-terminal beta-sheet domain with jelly roll topology found in CE2 acetyl-esterase from the bacterium Clostridium thermocellum. This enzyme displays dual activities, it catalyses the deacetylation of plant polysaccharides and also potentiates the activity of its appended cellulase catalytic module through its noncatalytic cellulose binding function. This N-terminal jelly-roll domain appears to extend the substrate/cellulose binding cleft of the catalytic domain in C.thermocellum.	0.000340328
NC_009523.1|WP_011957363.1|3281274_3282300_-|YvcK-family-protein	gnl|CDD|132873	cd07187, YvcK_like, family of mostly uncharacterized proteins similar to B.subtilis YvcK. One member of this protein family, YvcK from Bacillus subtilis, has been proposed to play a role in carbon metabolism, since its function is essential for growth on intermediates of the Krebs cycle and the pentose phosphate pathway. In general, this family of mostly uncharacterized proteins is related to the CofD-like protein family. CofD has been characterized as a 2-phospho-L-lactate transferase involved in F420 biosynthesis. This family appears to have the same conserved phosphate binding site as the other family in this hierarchy, but a different substrate binding site.	1.23387e-99
NC_009523.1|WP_011957366.1|3284200_3285172_+|hypothetical-protein	gnl|CDD|173835	cd00687, Terpene_cyclase_nonplant_C1, Non-plant Terpene Cyclases, Class 1. This CD includes terpenoid cyclases such as pentalenene synthase and aristolochene synthase which, using an all-trans pathway, catalyze the ionization of farnesyl diphosphate, followed by the formation of a macrocyclic intermediate by bond formation between C1 with either C10 (aristolochene synthase) or C11 (pentalenene synthase), resulting in production of tricyclic hydrocarbon pentalenene or bicyclic hydrocarbon aristolochene. As with other enzymes with the 'terpenoid synthase fold', they have two conserved metal binding motifs, proposed to coordinate Mg2+ ion-bridged binding of the diphosphate moiety of FPP to the enzymes. Metal-triggered substrate ionization initiates catalysis, and the alpha-barrel active site serves as a template to channel and stabilize the conformations of reactive carbocation intermediates through a complex cyclization cascade. These enzymes function in the monomeric form and are found in fungi, bacteria and Dictyostelium.	7.91987e-36
NC_009523.1|WP_011957355.1|3271705_3272971_+|glycosyltransferase	gnl|CDD|340830	cd03800, GT4_sucrose_synthase, sucrose-phosphate synthase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.	4.43066e-126
NC_009523.1|WP_011957373.1|3293855_3294524_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.82819e-10
NC_009523.1|WP_011957367.1|3285291_3286665_-|hypothetical-protein	gnl|CDD|274907	TIGR03991, alt_bact_glmU, UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. The MJ_1101 protein from Methanococcus jannaschii has been characterized as the GlmU enzyme catalyzing the final two steps of UDP-GlcNAc biosynthesis. Homologs of this enzyme are identified in a number of bacterial organisms and modeled here. A number of these are observed in proximity to the GlmS and GlmM genes, and phylogenetic profiling by PPP identifies the LEPBI_I0518 gene in Leptospira biflexa as a likely Glm-system candidate. Multiple sequence alignments of these bacterial homologs with their archaeal counterparts reveals significant structural differences, necessitating the construction of separate models. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Central intermediary metabolism, Amino sugars].	4.85734e-141
NC_009523.1|WP_011957356.1|3272987_3274325_+|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.69856e-58
NC_009523.1|WP_011957358.1|3275335_3276109_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.13344e-16
NC_009523.1|WP_011957364.1|3282970_3283756_-|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.73233e-34

Protein sequences

>NC_009523.1|WP_011957363.1|3281274_3282300_-|YvcK-family-protein
MDPCSFDIKIDVVAIGGGGGATHVLRAVAPFAASRTAIIAVTDTGRSTGLARQIGAMPAPGDLRATIAAFASDQVMAETLNHRFDGAGVPALAGMAFGNLLIAALTRVTGDFAVAVEHTARLAGASVHVLPVSVANTTLCAELIDGTYVTGEFEVRAPGKSPLARLFLHEPANAYPPALDAIRSADLVVIGPGSLWTSVLACLQFGGVVEALAHCRGTVAYVCNSTTQPGQTDGYRCIDHVQRIVTTLGPGVLDVALINRSNPDADALRPYEEEGLHLLRPDEDEIAAVRALGVMPLVRELTGYVEPRRALWNKQDTIRYDTGALGVALHEVVMMKGKTNG
>NC_009523.1|WP_011957362.1|3280181_3281282_-|aminopeptidase
MADPRVEKMAQVLVHYSLAIKPGDLFRIIAPPAAAPLVRALYREALLAGAHPYLALTLEETEELLFRYGSEAQIRFVSPLMRQEIEEINATIRIMASDNTRALSGIDPNKIALRRQALSDIQKRTMQRSAEGTLNWCVTLFPTNAAAQDADMSLSDFEDFVYRACKLHYDDPVAEWRKTAAEQQRIADLLNECSVIRLVAPDTDLTYRVAGRTWINCAGDRNFPDGEVFSSCDETATQGYIRYSFPAIYAGREVEDIRLWFENGRVVKATAAKGEDLLHSLLNMDEGARRLGEVAFGTNYDITRFSRNILFDEKIGGTVHLALGAGYPETGSQNVSALHWDMICDMRQGEAYADGRLIYKDGKFLI
>NC_009523.1|WP_041335414.1|3278937_3280173_-|lycopene-cyclase-family-protein
MHDVLVVGAGPTGMAIAAALSATGLRVAGLAAAPPTKPWQNTYGVWLDELPTPELRDTLGHRWSDVVVCVGERTIALDRAYGLFDNPRLQQYLLDQCERHGVTWSAGIAARVEHQATHSLVTTRDGRVVAARLVVDASGHSPALLRRPATSHVARQAAYGIVGVFSAPPIQPNRMVLMDYRADHLTAEERREPPTFLYAMDLGDGQFFVEETSLAHVPGLPLTTLEQRLQRRLTARGVTVQQVVHIERCLFPMNNPLPYLDQPMIGFGGAASMVHPPSGYMVGKALRRAPEVAQAIARALGAADATPRSAARAGWRALWSPARLRRRQLYLFGLASLMRCDSATIQEFFALFFSLPRHEWMGYLSDTLSTVELARTMLRLFIRAPGNVRRTLMAAAGAEHALLRRAALGQA
>NC_009523.1|WP_011957360.1|3278640_3278922_-|DUF507-family-protein
MKLSPAKIEQLSASLVDYLAEVDGVMFRGDDSQLRLAVEQIITDELLVEERLDAEIHKMLQAHKYEITMGRLSYDELFKKTKQRLVRERKLVL
>NC_009523.1|WP_011957359.1|3276138_3278640_+|transglycosylase-SLT-domain-containing-protein
MRCLWSVLVIALSLIACTPETATNVPSPSLIEAVTPVGTQGTPETETNVPSPPDASLSTSLQSRPDMASPEAPGTPQPDSPPALPGGSSSSVASPDELLARGLERREAGDYDAAAEAFFAAANAARGTPTGRAARFYLAESFALRERWTSAVEALNAFVADGIQDDLTARAWFWIARGHEEAGSHAAAIAAYEQFRSFATPAETYARLRQAAQERAVGRLDAAAANYEAVARSDLARSQRAAAYEAAIQVRRDLRQIDGALQLANELLTLAEQPAYRARLLIELADLPRSQGDLATARSWLFEGLTRAPGLPVSLAMVDRLRTDPEIAIPPDLAARVYEAHSRWSDAVAALDAALATADDSQRADLLRRRALALRGLGDFPAALTGFDAAIAAAGESDAGIQARLDRIQTVGQSGATEAAIQGYRDFAATFPNDSRAPEALRRAAALLDRLGDGEAAAQQRIDLGRRYPSLPLAQEAWFAGGLHLFVSGQAVQARQVWDELAAAATGAAALRARYWAGRAALAAGNGEEGRALLDQVIASAPDSYFAARARVLLNRRETGAIAPDDPMSADDWRSIEEWLATWAGEPPPDTTNPADDPTIRRARELDALRLRVEAMAEWSAALAIRNDNPYALYLLARYAHEQGAASVTLRAANRLIRLSPGGAASDAPLALRRILYPVPFTATVLTRSREFGVDPALMYALLRQESAFDPAATSWAGARGLAQVMPATGQGIAQALGVTGFRETDLYRPDLSIRFGAFYLSRQMTAMNGSIEGALAAYNGGPGNARRWSGGAPITDPDLFAERIDFEETRNYVKSVIAQYDVYRRLYRWDGE
>NC_009523.1|WP_011957358.1|3275335_3276109_+|Uma2-family-endonuclease
MTTVTETPTTDRFPYGWRYVERVAPDGTVTFEQIPLTLEDVAHPQEGDQVTHSDLHQRICAYLYNVLRGVLASIPGAVVLHDVRIAWDVPDLKAHGPDLAVIFGVRESKNWSTFDVAVEGVRPTLIIEVTSPETRAIDLMVKLDEYDLAGVEFYVIVDVVQRRGQVAPRLLGYRRTPTVYGVLSPDAQGRLWIEPLQIWLGVQEQAVMCYDASGKPIGDYPDLRAALNAETAARIAAEQRIAALEAELRRLRGEERA
>NC_009523.1|WP_011957357.1|3274328_3275228_-|RluA-family-pseudouridine-synthase
MPLTIPTTSPGALLCDALTAALGDATEALWLIARGGVWVDGVRVRDPGMRLPADATIVVQRPPDGIYREPVVTPEMILYEDDDLIALNKPIDTYVEATPWDAEGHLRAALARFLALRNGTAPPLHLAHRLDRDTSGVLLISKTPDVNAALQRVFRDGAAHKTYLAICAGLPSFDEIEIETGHGRGRGGMFRVFPPEAIGRTLPQGGTVKSMRTRFRVVRRLDDAALVRAWPLTGRTHQIRLHLAFLGHPLIGDSKYGGLSIWRGTPAFHHHLHAERLELPHPQSGAPLVIVAPAPEWAQ
>NC_009523.1|WP_011957356.1|3272987_3274325_+|serine-hydrolase
MQPVRLQPRHRRRRRHHARRVTPPILRVVLIIAGALLVTLATCSAPLLPLRLRQASEAAPTPLPAAAIVSDPRMVATKAPQPSPTPLPSAIPIATPIPTPTLMPGSAPGAPPLDPLGREIDAYLTGLTASGQFQGAVLVAQDGKVVIARGYGNADENVPNTVYTRFRLASITKQFTAAAILALQQDGKLTVDDAICVYLDNCPDAWKPLTIRHLLTHTSGLVDYTDFASFEPTEMHPATPQELVKRFRTFPLAFAPGTLYDYCNSNYVLLGLIIERASGMAYADYLHQRFFLPLGMTATGYDTSRGAIADGAQGYVVPGRKSGFLDASTLYAAGGLYSTVGDLFRWDQALYTNEALARDQLDQMFTPALRDYGFGWKIEVINGRRRISHPGNMTGVATFFARYPDDRATIIVLANMEYANVEGIANSIASRMFPPPPTPSPTRTR
>NC_009523.1|WP_011957355.1|3271705_3272971_+|glycosyltransferase
MRIAMLSVHSSPLARLGGKEAGGMNVYVRELSREFGRRGIAVDIFTRAQAHDAPTVVQIDRGVRLIHVRAGPPAPCDKNRLLDYLPEFIGRVRCFADGEDLHYDVIHSHYWVSGEAALALRRSWGAPVVHMFHTLGAMKNLVARGDQERETRERVAVEERILREADAIVAATPLDRAQMVWHYAADVGRIRVVPAGVDLRRFQPRDAAMARTMLDLPPAPHRIILLVARIEPLKGIDALIEASALLVQRHPEWRDTLTALIVGGGSEEERAHWNAEQRRLDAIRQRLGIANVVRFAGAQPQERLPLYYAAADVVTMPSHYESFGMAALEALACGKPVIATSAGGPAFIVEDGVSGLLTPPSDPPTLARHLERLLLNDDERATMGAAARERALRFGWEHIACDILGIYRDLLQQRDRQARAG
>NC_009523.1|WP_011957354.1|3270539_3271520_+|zinc-dependent-alcohol-dehydrogenase-family-protein
MRAVRFASFGEPADVLTVENIPAPQPGPGQVLVRVQVRPINPSDLFVIRGLYGALPRLPAVPGFEGAGVIVGVGEGVTDRTIGQLVIPMGASGLWQEYVVVPAARAIPVPEPIGDRQAATAFVNPATAWLMLTETLRVEPGEWVLQNAASSVVGRHVIQLGQRLNFRTINVVRRREVIDELRAMGADEVICEQDENVVARVHALTGGKGVRYALDSVGGASGARLAASLGAGGTMLVYGAIAGESLTIHPGMLLFRSATIRGWWLTHWFQSATPSQVQSLFDTLFRLIGDGTLSTPIVAEYDLADVREAVREAERKTRPGKVLLVG
>NC_009523.1|WP_011957364.1|3282970_3283756_-|STAS-domain-containing-protein
MMVGLTLSVFLIPEQTFVALPFLTVPIVLVTLGRHRLSILLTLVSGIVAGAGLAWFAPSVEVEQVIIGDALPLVSGIGFVTLLVIIWLLSDRLLTISDAAVALADKRAAEAEDARQRAEEAQSTIAQQYAEQQRLLDLVSVLETPVIAIAEGVLLAPIVGHLDSRRAGQLTQRLLDAVYAQRARAVIIDIAGVPLVDTQVAQLLIRTAQSIRLLGSRVALTGISSETAMTLSNLGMRLEEMQTMRNPQEAIQVMTMRTVNR
>NC_009523.1|WP_041333694.1|3283783_3284005_-|hypothetical-protein
METGLEFVANARRQLIRLIALTIVASSCAALLLIAILMIITGNVVGLASYAGVVVLGLAGSLATLALLKRRVL
>NC_009523.1|WP_011957366.1|3284200_3285172_+|hypothetical-protein
MTIESWYWRAVESIDYPFPQRIHPDADWLEQEIIEWCCAHRLIQSQEQIKHIRDALLAEFVSRANADLSRPMLRLIGLWTVWFFFLDDLTDTVPSVDALADFHLRILSATAEDTTYGQVHPLISAVADLWAELRRYAGLVTQVRFQRALVQTLEAHLWEVSTRVDRVYPDSATYADMRLWSGAFFPMIALIDMARDFVLPSYLFEHALMRELLDAAARTVLWYNDLWSYPKEQSANALAHNIVHILIQEQRLSLYEALDRVITQHNWSLRRFLELKQRIQGFSGENAQTTIFLENVAAWLRATQDWSHRTNRYRSQMVRAIHT
>NC_009523.1|WP_011957367.1|3285291_3286665_-|hypothetical-protein
MTDEPIVFFEDEGCRTFLPLTHTRPVCDLRCGIFTLRERVRTLTGMTPAVICRSHLARAYGVGRWPLTLLSRSTPLTFVNARALDAGWIFDLLDEPVGTVYLTDAGHALLGGPVLLGARLTPWMASAVLPYLLEQRGAAALAELRRIGRLVEIETRLLTFPWDLIALNGEQIVRDVPLVVRQDGWICAADQPPAHPSIVVSNPAHVFIHRDARLEPPLALDARDGPIVIDAARIEPFSFIQGPAWIGPGSLIASARIRGETSIGPVCRIGGEVEASIVQGYSNKHHDGFLGHSYLGEWVNIGAMTTNSDLKNTYGTIRMVIEGFGQIDSGILKLGCFLADHVKLGIGVHLNGGAVIGTGSNIFGVHFAPKTIPPFTWGGEVFREYRIQSMIDVARKVMARRKVSMSAEQEEVLRAVFAMTRGDRAGLDDGGGRDEAALRRAEAEAVRAFDLVEASGG
>NC_009523.1|WP_011957368.1|3286688_3287876_-|hypothetical-protein
MQPVVQRLSSLRRLLRPLALTFVGIVLLSLGVAYFFIFIYRTATLPPMFSFITLQFLPLWARGLVFAALGLIVLAVGIWQLSGVAVISLDARDTSGEVVLAYQRDQMHPRMTVISGGAGLLITASLGRMAQLLTCITPVQDPVEYYYRASSLFNFENVVFVVPTLEPHEVFVELDDGQRFNIKHNIAHDERLAQRHVVNIYIGDEHGPVTTPLQVTQVALDAIASADVIVFGPGSLYESILPNLLIPDLRDAIRRSKACKIYICSLMTEPGMTTGYSVGDHVRQIVRFGGFTPDYVLVNAPRIDAEVRRIYAAAGQMPVFLTPEEYEETAVSTTDRLTTRDILIEGAKVIEADLATAVVQLTASLDHPGEGRTVRVLRHDPEKLATAIMEVWKRQ
>NC_009523.1|WP_011957369.1|3287902_3289012_-|phosphoglucomutase
MQTVRYTYCWEGAVVADFTLDAVRRRYAALADLLNARGWRCLVACDTRFLSAQIAADCYRGLRALGAQVSLSATPLPRPAVDVALDQHVADCALIVSAGNREYWLNGLVLIAPAPGLNPFIDGAPPSEWSPFPSDTPDANLIDARRVYIDSLRDVIDVELVRQTSLTIFVDVMNGTTGGVIPAVIGDDARTKTIEINREQDAWFGRQTPHPHSASLVRLRKLVRESDSHLGVAISADGRALGVVDNEGELASPLEIALLLAHYLNRQHRQRGLVIVPASAAASAPWVRGWETQTGLNVEFAEQPALRIAEARAAYQLLIGVTEDGQLTFGRAGGIGDAPLAALMLVELVARRGVKLCVMREKLRQPQGA
>NC_009523.1|WP_011957370.1|3289033_3290443_-|phosphomannomutase/phosphoglucomutase
MITVNPAIFRAYDIRGIVDRDLSEEVYRTLGRASGTFFRQHERRRIVVARDARLTSPVYAAALIEGLRQSGCDVVDIGMAPTPLMYFAVSFLRADGGAVVTASHNPPHFNGLKLRLSDPVYGGTPLSSDQIQEVGRIAAGGAFASGSGGYEQYDAVDDYVRDVVRHIALKRRPKVVLDGGNGVAGPLGVRTLEAIGCDVVPLFIEPDGTFPNHHPDPLKEENLQDLIRAVRETGADMGIGLDGDGDRLGVVDGNGEIVFADRYLIVLARQALARGPAPIVFDVKCSAVLIDAIRAFGGTPVMWRTGYSNLSAKMRETGAPLAGELSGHVFGAVEHHFHDDGIFAGCMLLDALEKSGQTLAEALAPFPPLPSLSEGRLPFDEDTKFKAIEFVRDYFAARYPVIDVDGVRVDFGDGWGILRASNTEPAITTRFEARTMERVHEIRDTMIGKLREFASADHGTSAVGRNERG
>NC_009523.1|WP_157041312.1|3290551_3291982_-|O-antigen-ligase-domain-containing-protein
MALCLAVFSTGGLPLAFRLTGLLLFVALALVHPAGGLACVILTAPLYLMPATVDSPTRTLLLPLHEVALLITTAAVCWRWIGGHIRDRRMPDAGAALQRVRAMSVSHAPEALLALAGIIGVMLAVPEGRGAALREFRWLIVEPLLFYGLVRTIRMSRETLIGALALSGAFVAVIGAFQFVGLDLTPLIGEKRAFSENIIVVDGVRRVTSVYGHPNNLGLYLERVWPLAAAMAAWIWHARRGDGAASASPAVSERRSTGAAFFFAACALLSLTGVVVSFSRGAWLASVIAAVVLGAGWLLHRSQHRQAVRWSALAFIGALIVGMTGLALTLRGGPGGGSVDARLLLWREALVYLRQNPLGLGIDQFYYYHNPAFGRSAIDPSLVGTSEEFAAHPHNLLLDAWVNVGPLGVLAFGLLLVRFYRNALIAVRKRREVVIAGALAAMTAALFHGLVDRFYFVPDLAIAFWVLMTVGERSEN
>NC_009523.1|WP_011957372.1|3292068_3293721_-|cellulase-family-glycosylhydrolase
MIRVLVHISVIVLLTGALAVYTWFDNEVNRGVTYEPPATPIAWTDVPQIGVNAFNLQFEPDVADVTRTLELARDMGAHFVRIQMPWDDVEIHGKGDFVDRRTPEQVRSSWEKYDFIVAEAQRLGLELIVRIDRAPQWARPSDHADPRFQAGLAEYASSTGPPENYADYADFVAAVAARYRGQVRFIQIWNEPNLAYEWSWRTPEPERFVELLRMAAIAARTANPDVVILFPSLSPTDGKEPRIAPMSELEYLDRVYRAGGAPYFDIMSAQAYGLGQPPDENRYIRLRWRPDAPFRDLDRPIDSRIDVSRIVMLREVMERHGDGAKAVWISEFGYNSAPDHIPEPARSTWGPPVSEETKGAYLVGQLERARREWPWVGVMNIWFLRWGGYREPDPADPTPYFALVDRDFRPLPAYDAVRAYANNSSIVGVGAHTWDHPAVESSGEGEWRLRFTGQSLAIRFNAPAEVTLDGGAALRFDPSGDGSLAQVASGLTDGVHTCTIRSAAAPDSFVVGRERPLPWVWTLVPALLTAALACVGALMMLDIGRSVARR
>NC_009523.1|WP_011957373.1|3293855_3294524_+|GNAT-family-N-acetyltransferase
MAFTVRPATQADIPDLARLIVELYQAEMPGVLTGPVEKQIELLRFTLEANGDKAVHHRYVLCNERGMVIGTGMIEFPGNGRFERAPNGTVATAFRTLGVFPALRLFGVVARTLFGVYRHTDPQSALIHTVVVTRSERSNGAGAVLMHALESAIREFGYTRARLQVLAWNTGAQRFYERLGYTTIWRLSGWRVLLSWPSVVMEKALEDCQGGEHVSTMPASSG

Crispr_ID: NC_009523_61

• CRISPR_ID: NC_009523_61
• CRISPR_location: 3334440-3334531
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_61

Consensus_repeat	Method
TAGCCCGCGCAGGCGGGCTTTGCC	CRISPRCasFinder

spacers of NC_009523_61

>61.1|3334464|44|NC_009523|CRISPRCasFinder
CTGGCTAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCCGATA

CRISPR arrays and Neighbor proteins around NC_009523_61

CRISPR arrays

The CRISPR arrays of NC_009523_61

>merge|NC_009523|61|3334440-3334531|CRISPRCasFinder
TAGCCCGCGCAGGCGGGCTTTGCCCTGGCTAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCCGATATAGCCCGCGCAGGCGGACTTTGCC

>NC_009523|61|58|3334440-3334531|CRISPRCasFinder
TAGCCCGCGCAGGCGGGCTTTGCC	CTGGCTAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCCGATA
TAGCCCGCGCAGGCGGACTTTGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957401.1|3334670_3335408_-|lysoplasmalogenase	unknown	unknown	gnl|CDD|377946
NC_009523.1|WP_157041316.1|3323024_3324731_+|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_011957391.1|3319807_3320191_-|PPOX-class-F420-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274712
NC_009523.1|WP_011957393.1|3322133_3323003_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|372616
NC_009523.1|WP_041333709.1|3342551_3343805_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957404.1|3337730_3338042_-|M48-family-metallopeptidase	unknown	unknown	gnl|CDD|320703
NC_009523.1|WP_011957409.1|3344497_3346069_-|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl|CDD|223363
NC_009523.1|WP_011957407.1|3341697_3342570_-|restriction-endonuclease-subunit-S	unknown	unknown	gnl|CDD|341149
NC_009523.1|WP_011957399.1|3332511_3333561_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009523.1|WP_011957392.1|3320331_3321948_-|hypothetical-protein	unknown	unknown	gnl|CDD|223679
NC_009523.1|WP_041333703.1|3331396_3332515_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009523.1|WP_011957402.1|3335651_3336365_+|dienelactone-hydrolase-family-protein	unknown	unknown	gnl|CDD|223489
NC_009523.1|WP_011957397.1|3329226_3331287_+|NAD(+)-synthase	unknown	unknown	gnl|CDD|235057
NC_009523.1|WP_157041086.1|3336819_3337170_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957406.1|3340974_3341694_-|hypothetical-protein	unknown	unknown	gnl|CDD|224854
NC_009523.1|WP_011957400.1|3333604_3334381_+|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl|CDD|366542
NC_009523.1|WP_011957410.1|3346279_3347536_+|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl|CDD|234856
NC_009523.1|WP_011957396.1|3328588_3329077_-|metallophosphoesterase-family-protein	unknown	unknown	gnl|CDD|378975
NC_009523.1|WP_011957395.1|3324723_3328527_+|glycosyltransferase	unknown	unknown	gnl|CDD|224137
NC_009523.1|WP_011957405.1|3338038_3340978_-|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl|CDD|273028

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957401.1|3334670_3335408_-|lysoplasmalogenase	gnl|CDD|377946	pfam07947, YhhN, YhhN family. The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many are annotated as possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. A human member of this family, formerly known as TMEM86B, is a lysoplasmalogenase that catalyzes the hydrolysis of the vinyl ether bond of lysoplasmalogen. Putative conserved active site residues have been proposed for the YhhN family.	4.04412e-20
NC_009523.1|WP_157041316.1|3323024_3324731_+|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.96761e-24
NC_009523.1|WP_011957391.1|3319807_3320191_-|PPOX-class-F420-dependent-oxidoreductase	gnl|CDD|274712	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN. [Unknown function, Enzymes of unknown specificity].	4.0869e-49
NC_009523.1|WP_011957393.1|3322133_3323003_+|methyltransferase-domain-containing-protein	gnl|CDD|372616	pfam13489, Methyltransf_23, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.50829e-11
NC_009523.1|WP_011957404.1|3337730_3338042_-|M48-family-metallopeptidase	gnl|CDD|320703	cd07344, M48_yhfN_like, Peptidase M48 YhfN-like, a novel minigluzincin. M48 YhfN-like protease is considered as a CaaX prenyl protease 1 homolog, with most of the sequences in this family as yet uncharacterized. It contains the zinc metalloprotease motif (HEXXH), likely exposed on the cytoplasmic side. It is probably associated with the endoplasmic reticulum (ER), regardless of whether its genes possess the conventional signal motif (KKXX) in the C-terminal. Proteins in this family proteolytically remove the C-terminal three residues of farnesylated proteins. This novel family of related proteins consist of the soluble minimal scaffold similar to the catalytic domains of the integral-membrane metallopeptidase M48 and M56, thus called minigluzincins.	1.21702e-23
NC_009523.1|WP_011957409.1|3344497_3346069_-|type-I-restriction-modification-system-subunit-M	gnl|CDD|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	2.23826e-110
NC_009523.1|WP_011957407.1|3341697_3342570_-|restriction-endonuclease-subunit-S	gnl|CDD|341149	cd17260, RMtype1_S_EcoEI-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S.EcoEI TRD1-CR1, S.EcoJA17PI TRD1-CR1, S.EcoJA23PI TRD1-CR1, and S.StyLTIII TRD1-CR1. Escherichia coli A58 S subunit (S.EcoEI) recognizes 5'... GAGNNNNNNNATGC ... 3', Escherichia coli UCD_JA17_pb S subunit (S.EcoJA17PI) and Escherichia coli UCD_JA23_pb S subunit (S.EcoJA23PI) recognize 5'... GAGNNNNNNNGTCA ... 3', and Salmonella typhimurium LT7 S subunit (S.StyLTIII) recognizes 5'... GAGNNNNNNRTAYG ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example: S.EcoEI TRD1 and S.StyLTIII TRD1 recognize GAG/CTC, S.EcoEI TRD2 recognizes GCAT/ATGC, and S.StyLTIII TRD2 recognizes CRTAY/RTAYG. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It also includes TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases, such as Pseudomonas putida Jo 4-731 Type IIG restriction enzyme/N6-adenine DNA methyltransferas RM.PpiI and Porphyromonas macacae COT-192 OH2631 RM.Pma2631ORF8845P, as well as type I DNA methyltransferases such as Chlorobium limicola M.Cli245ORF128P. RM.PpiI recognizes the sequence 5' ... GAACNNNNNCTC ... 3'.	3.61813e-25
NC_009523.1|WP_011957399.1|3332511_3333561_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.09478e-74
NC_009523.1|WP_011957392.1|3320331_3321948_-|hypothetical-protein	gnl|CDD|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	3.1178e-08
NC_009523.1|WP_041333703.1|3331396_3332515_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.21443e-66
NC_009523.1|WP_011957402.1|3335651_3336365_+|dienelactone-hydrolase-family-protein	gnl|CDD|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	6.04682e-44
NC_009523.1|WP_011957397.1|3329226_3331287_+|NAD(+)-synthase	gnl|CDD|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0
NC_009523.1|WP_011957406.1|3340974_3341694_-|hypothetical-protein	gnl|CDD|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.00165788
NC_009523.1|WP_011957400.1|3333604_3334381_+|sugar-phosphate-isomerase/epimerase	gnl|CDD|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	1.14725e-20
NC_009523.1|WP_011957410.1|3346279_3347536_+|phosphoribosylamine--glycine-ligase	gnl|CDD|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NC_009523.1|WP_011957396.1|3328588_3329077_-|metallophosphoesterase-family-protein	gnl|CDD|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	2.90803e-35
NC_009523.1|WP_011957395.1|3324723_3328527_+|glycosyltransferase	gnl|CDD|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	2.45345e-48
NC_009523.1|WP_011957405.1|3338038_3340978_-|type-I-restriction-endonuclease-subunit-R	gnl|CDD|273028	TIGR00348, R_protein, type I site-specific deoxyribonuclease, HsdR family. This gene is part of the type I restriction and modification system which is composed of three polypeptides R (restriction endonuclease), M (modification) and S (specificity). This group of enzymes recognize specific short DNA sequences and have an absolute requirement for ATP (or dATP) and S-adenosyl-L-methionine. They also catalyse the reactions of EC 2.1.1.72 and EC 2.1.1.73, with similar site specificity.(J. Mol. Biol. 271 (3), 342-348 (1997)). Members of this family are assumed to differ from each other in DNA site specificity. [DNA metabolism, Restriction/modification].	6.75289e-130

Protein sequences

>NC_009523.1|WP_011957400.1|3333604_3334381_+|sugar-phosphate-isomerase/epimerase
MRFGICTTPDQIDVVAAAGFDFCELPARAVLPFDDDAAAAPALRAIAAARIRPESFNVLVPAEIPLCGPHADLDVLRTYLQRAFSRMASLGAAIAVLGSGAARRIPDGWSRERALDQLADALALAGEEADRCGITLALEHLNRQECNVFNTVGECATFLRDRRLHHVYLLADLYHIEIEREPLDAVAAAMPRIVHVHVAGGGRHPPDTPGYDYAGFMHVLRNAGYNARISAECALENLAEQAPVALAFMRAQWQGGIV
>NC_009523.1|WP_011957399.1|3332511_3333561_+|Gfo/Idh/MocA-family-oxidoreductase
MSDTAIRFGIIGAGVAGRYHAQAIAQTPGARLMAVCAGHPERATALADAFNARVEPDVAALLACDDIDAVCICTPSGQHAEQGIAAAKAGKHVLVEKPLAITLADADALIDACRTAGVHLGVALQRRTDPDFCAAREAIAAGALGRPILGVVTIPYLRTQTYYDSAAWRGTWALDGGGALMNQGIHLVDLLIWLMGDEIVEVQAHTATLAHTIEVEDCAGATLRFASGALGTIAATTAAAPGFPHRVEVYGTQGGIQIEGEAIVRWETIHHAPPASLHVTSGSGRQEAGAGAYPTGISAIGHTRILGDFVAAIRECRQPLVSGSEARRALAVVLAIYESAREGKPVRPG
>NC_009523.1|WP_041333703.1|3331396_3332515_+|Gfo/Idh/MocA-family-oxidoreductase
MTTHPPLPDLRFGMIGSAAGIAASHVKALTQLPGASIVGMADVAVERGEARAREVGCPFFADYRAMLDTVRPDVAVICAPHPFHAALAIDCLEAGAHVLVEKPLAVSVSEADAMIAAADRAGRLLAVCFQQRFRPVVEHARALIESGAIGDIVRVLCVEPWFRTQFYYDSAAWRGTWRGEGGGVLMNQGPHPLDLLCHLVGAPAKVWGWVRTQGHAIECEDVAHALLEYPNGAPGYIYFSTVEASPERRMEIVGDRGALVIVFDHLTIHRFAMPLSEYRATAPEMWGQPQIHTETLHLPGDGGGHLAVYLDLAQSIAEGRRPRCDARQARMSLELANAVILSGVTGQAVSLPLDGQAYDALLDDLKSGRRTL
>NC_009523.1|WP_011957397.1|3329226_3331287_+|NAD(+)-synthase
MRPFNSIYTHGFVRVAVCIPSLRVADPAYNVTRTIGLAERASVANAAVALFPELGLSAYTCDDLFQQDALLEGVLDALNRLIDASRSLTPVLLVGAPLRIDGALYNCAIVIYHGRILGVVPKSYIPNYREFYEKRQFSAARDALRQTITLAGATVPFGNDLIFVAGNVPGFALHAEICEDVWVPAPPSSFAALAGATILANLSASNITIGKADYRRMLCAAQSGTCIAAYLYSAAGPGESTTDLAWDGHALIYELGELLAETGRFADDERMITADIDLERIVQERMRTTSFADAIGDHRERLRTMRHIPFTFDIPEGDVPLQRIIDRFPYVPGDPSRRDERCYEAYNIQVHGLMKRLISTGIEKVVIGVSGGLDSTHALIVAARTMDRLNLPRTNILAYTMPGFATSEITLANARSLMHALGVTAGEIDIRPSCMQMLRDIGHPFARGEPVYDVTFENVQAGDRTSHLFRLANMHGALVVGTGDLSELALGWATYGVGDHMSHYNVNASAPKTLIQHLIRWVADSGQFDDATSAILRSILSTEISPELIPPGDADHSRPAQSTQAIIGPYELQDFNLFYITRYGFRPSKVAFLAWNAWSDASRGDWPPGLPGDERRQYDLATIRRWLDVFIRRFFKTSQFKRSALPNGPKIGSGGSLSPRGDWRAPSDAEAEVWLDELRRNVPDDC
>NC_009523.1|WP_011957396.1|3328588_3329077_-|metallophosphoesterase-family-protein
MRIAIVSDIHDHISRLATALERVRGADTLICCGDLCSPFIMRQLGEGFAGPIHIVFGNNDGDLFRLTVAAANFAQITLHGAFADLDLNGLRVAVTHYPEIAMPLLESGRYGLICCGHNHRYSVVQRGAVTLVNPGEVMGELYGDATCAVYDSDTGDVTRYDL
>NC_009523.1|WP_011957395.1|3324723_3328527_+|glycosyltransferase
MNSAVIVLTWNGGAEAIACLQRVRQLDPAPDIVLVVDNDSRDGTPDQIAALFPVFTLIRNPHNLGYSGGMNVGIRTLLAHESLPDVIVLLNQDTLVDPGWLGAIIAPFADPAVGAVGCKIRYPDGTIQHAGLTLDWPLALSRHVGRYEPDRGQYDKPRDVEFVTFAAVALRRQALERIGLFDEGYRPAYFEDVDLCVRLRRAGYLIRYEPQATLIHREATSQRDRLTRSALVHRGRLRFVLKTYALDEITGPFAQAEHDFIGSLEQPSEKRALRWAYDRTLADLLHIWLARRETNQDVSEATATVQRLLLNLQHELSRSSHRRIAARLADIENLVTDQPALLAARYTLLDSPPLRVDLGESFCINVDVHNIGRIAWRSAGAHPIRLGYRWVDQAGGRIVGLHRSAIPKDILPGEHAHIALRIDPPPQPGVWQLQISLVEEYIDWFSTYGIPPLCVDIEYVLDTALRAVILSANVAAYDAIGKYILFQTQTLRSAGYRVVILAEHVDQRLPTDILLSVVAINCQIPDEHYAVALEHLHRADLIILHYPLFYDLAGLVRDVRHGVVLFDYHGITPPDIWGVESPDYYARMVRGVTNLSLVQYADYAIGHSRFTCAELIATGLIDPKRVIQMAFPIVAHATLSGAPGCDLIERFDVRNKHVLLYVGRMARSKRVDMLIEALPAIVARHPETKLLLVGDDRPLVYRQYVREVAARARELGVAACVQFTGQVDDTTLDQLYCACAVFVTASIHEGFCMPVVEAMAHGRPVVATRVTALPETVGDAGLLFDPDDIAGLADQICRLLDDLPHPGAHWDMSQFGRLVPVTEEEIAALRQRKIGIVTPRYGVGVLGGAEQGIRGWAEQLAARGYTVEALTTTTVDMSNWGDHVPPGVDHLNGVTIRRFRTTSIDDRWFHAVREQAEAGKLPRFSEEQRFMEHNLRSVDLEQFIAQHAEEYACLLVIPYLFGTSYWTIRTAPERSILIPCLYDEPLARLGIFRSMLEQAAAIFFNSEEEEAFATRVLGVTNPYRACLGFGFPDHPEPGHPHRFRERSGVTGPFLLYAGRLEHGKNVPQLIDYFIRYKAERPGALTLALSGTGDISPPSRHDIVALGMLPREVLNDAFASALALCQLSLNESFSLVLMESWLQGRPVIVHADCAVTNGHVKRSGGGYAVRSYEDFRAAVDALLANDEHAATLGARGKTYVIERYTWSRLLPRIEENIARFSRPRSLYARLAQRGVVRALEFTRKRFEADFLDLVERALAETRPQAYAD
>NC_009523.1|WP_157041316.1|3323024_3324731_+|glycosyltransferase
MHLLIISHDVVGQRMAGPGIRAWEMARALSSCAEITLIAPYPIDVTAPGIRTGRFTMGDTSSLAFYLDQADVVLANGFLLEAHPELAEASQPLILDLYDPTLLENIELFRHASPVEREERARRDIDLLNRQLAAGDLFLCATERQRDLYLGALMAAGRITPERVDADPLLRNLVVVVPFGLPASPPQRTGPGVRGVIPGIGDNDLIILWNSGLWDWLDPLTLIQAMPQVIARVPNARLVFMAGKHPGGAAPMRMTDTARALASDLHLLDRHIFFYETWVPYADRANLLLDATVAVSLHRQHLEMAYAAIRSRVLDYLWVGLPAVLSDGDPAAALAREHGFALVTPPEDPEAVAQALITLLTDEARRAELADQARALAPQYTWTKVVRPIVRFLEAAPVHKPRSASRQRSTPAASSPSTAERTDRRQTLQEQRNRALQALEATWRLDQLTPPAQGVAGKVRNMALERFVWPLLAPLIARQRDHNAAVIRAAYATAEYQDLLSNDVARLIAAVRLLAQQTRDIAEHMAGLEEADQHLRAALYGEQPPPPPRTRTQMVDIDRETLIEERYE
>NC_009523.1|WP_011957393.1|3322133_3323003_+|methyltransferase-domain-containing-protein
MDDGAVATDASRLFNAWYYQTGCGSPYQRDDRWINLFSKFAERIVAEIGPRSVMDAGCAFGMLVEQLRARGVEAEGIDISGYAIAQAHESVRPYVRVASVTEPFGRRYDLIVCIEVLEHMPRHEAEAAIANMCMWSDDILFSSSPYDHKEATHMNVNPPEYWADRFARHGFFRDVDFDASFLTPWAVRFRRRSEPLHRIVRDYERRFWELWHAHQQLRELALEQRDRLAQAVAAQKEAERLAEERHAYTIRLESELTRKNAHIRYLEDLIHRLEHGRVIRLLRLLTGRK
>NC_009523.1|WP_011957392.1|3320331_3321948_-|hypothetical-protein
MRYLLDQRSYDEMLRQTFHPRDCYVRNNEYCHHLYIDGVKYTVARAVYACMKEAQAKNDTDAMLHLQMHISDLERLISAARARGENVQALRLLGDPPPSDEEARPQLDNSFVPKVPHTIEETGLNRTFLTEHFLRILYNKGRATGREIAATMGLLYQIIEPIITDLRGVEQIDIIGQRGYGDINYEYVLTIRGHEAAQAAMAKTQYVGPCPVVLDDWIASVKAQTVRNVKVTRRNIRDAFEGLVIDESILNMVGPAVNSGSSVMLFGYPGNGKTTIAERITHLMGDDIFIPHTVYADGAIIKFYDAVIHEPPRRPWNDEIEYDRRWTRICRPVVIVGGELTLEQLNLIYNETSKIYEAPFQMKANCGIFLIDDFGRQQVRVFDLLNRWIVPLEKRYDYLNTVTGQKIQIPFDQLIMFSTNLDPKDLGDDALLRRIKFKIEIIDPTEEQWREIWKIMCKVRKVPYDDRSIDYLVAKWFRADGRPFRMCQPRDILDQLISIARYNMETPLLTADLLDAACLSYFPSKEKKNFGAKVRLDL
>NC_009523.1|WP_011957391.1|3319807_3320191_-|PPOX-class-F420-dependent-oxidoreductase
MTAALFAPLAGHQYMNLTTFRKNGQPVPTPVWFAQEGDRIYVVTQAASGKVKRIRANPRVQLTPSDARGKPLGATIEAQARILDPSEGEVARRALAKKYGVMFQMFAALWKLQRTTPIFLEITPVTF
>NC_009523.1|WP_011957401.1|3334670_3335408_-|lysoplasmalogenase
MKRHTFAYALLALAALVMLSGLAIGNRGDARNRIPLPLRMLSSLLVWLAALLLWRGATPASRPPAKLAAAGMGCGFLGDLIMARVLPLPHHVIFGMLAFGVGHGCYIGATAHHLVRRDALRTLPLPLLASWIVGAAGWYGVARNPAQPGMLNRAALAYALLLASMSGMSAALAVRDRQYLSLAIGGALFFISDLILAGELFRNLFFPHIGDAIWLTYLTGQGLIVEALGTGREVQVLPSTDTARE
>NC_009523.1|WP_011957402.1|3335651_3336365_+|dienelactone-hydrolase-family-protein
MADIVIPAPDGALNAYLATPDGNGPWPGVVVIHDALGMRRDTRQQVEWLASEGFLAIAPDLFDGGTVITCLRLIIRDYLTWQGMMFRHIAAARDWLAQRDDCTGNIGVIGFCMGGGFALLLAPGHGFAASSVNYGVLPKEIERVLAGACPIVASYGAKDITLRGAAQRLEQALTTLGIEHDVKEYPDAGHAFLNEHDPRDFPALMRIVWRATQTTYHEPSARDARQRIIAFFKRHLA
>NC_009523.1|WP_157041086.1|3336819_3337170_-|hypothetical-protein
MRSRELAHQERLVLGLALATRITLALGTHAAAQAIPCWRRGGRRRSWAGVHRRFRLGRDACWQWLWRNERTPIRWEPAGLDLATWSAEARARYAPAGTTLRRRNAAGMPHPAATKT
>NC_009523.1|WP_011957404.1|3337730_3338042_-|M48-family-metallopeptidase
MKKAPPLDWIPLEEAVPVDLFKAEVQVWAQRLEVTPREIHLRPMKRKWASCSSRGRLTFDTGLLRQPATFRREVIVHELLHLKVPDHGPLFKALLKAYLAIDL
>NC_009523.1|WP_011957405.1|3338038_3340978_-|type-I-restriction-endonuclease-subunit-R
MTLSSERRVVQISLIRYAEEARWEYLSPGDALSRRGGLSQPFLRDVLMAKLQELNPGVITSAEQADDVIARLVRLRPDIEGNREAWEYLKGLKTVFVQAERRERNLRLLDPQQVEANTFHVTDEFRFHIGPHKIRADVVFLVNGIPVILVETKAATRLEGIAEALDQVRRYHREAPDLLVQTQLFALTQLVEFFYGATWSLSRKALFNWREEVGANSNSPRPDFETLVKSFVARRRVLRVLTDYILFARKDGELSKIVLRPHQMRAVERCLSRARDPQKRRGLIWHTQGSGKTYTMLNLARLLLETPAFQNPTVLLIVDRNELQSQLFQNLEAIGFGKVHLALSKRHLRDLLEADTRGVIVSMIHKFDDIPENLNARANIFVLVDEAHRSTGGDLGNYLMGALPNATFIGFTGTPIDRTAHGQGTFKTFGADDPQGYLDKYSIRESIEDGTTVPLHYQLAPNDLIANREAMEKDFWAAAGLEGVADVEELNRVLDRAVTLTNMLKNRERVDKIAHFVAGHFRTYVQPMGYKAFLVAVDRESCCFYKEALDRLYKEAPDRYLPPEASAVVISAGHNDPPHIKRYHLSEDEESRIRKAFRKPDENPQILIVTEKLLTGYDAPILYCMYLDKPMRDHVLLQAIARVNRPYESEDGRRKTTGLILDFVGVFENLERALAFDSKDVSGVVEGLEVLQERFAQLMAQGRAEYLPLTAGKTEDKAAEAALEHFRNKEHRETFYAFFREVQEIYEILSPDPFLRPFLEDYERLVEMYRLVRSAYEPHVPVDKSFLRKTAKIVQQHTRTSQIREPQATYEIGPAALLALLHEDKPDTVKVFNLLKELHCLVADEAACAPHLIPIGERAEEIRRHFEERLISAQEALQHLDKVVRQLQTAQEERRSSPLSPQAFAVEWWLRTQGTEAEKAAQTAASLEEAFARFPNWTISVADERELRTRLYKALLSLGVKEIVAWADRILDLLRRAIE
>NC_009523.1|WP_011957406.1|3340974_3341694_-|hypothetical-protein
MPYDPNRHHRRSIRLKGYDYTQPGAYFVTLVTHERMPLFGDIVNGDMRLNDIGRVAEQCWLDVPFHFPHVALDAFVIMPNHIHGILWIVESPPETPEMPEMPETVGAKNFSPLPPPSSPPSSPPSSPPLSPPSSPSSFTKRPRGTSKTIGSVVRGFKIGVTKWVRQNTDIYIVWQQNYHEHIIRHERALNAIRRYILENPLRWYLDRENPACTGPDPLAQDIWAMFRQDDADHPAGGDP
>NC_009523.1|WP_011957407.1|3341697_3342570_-|restriction-endonuclease-subunit-S
MPEIALNPPPFNLPPLPEQRAIAHVLRTVQWAKEATEGVIAALKELKKSLMQHLFTYGPVPVTERERVPLQETEIGPLPAHWRVVRLGEVATLFTRGIDPANAGAKRYIGLEHIEPGNIRIQHWGKADDVRSLKTAFQQGDVLYGKLRPYLDKAVLAEWDGICSTDILVIKAQSSLLPEFLAYLVHTSQFIDYAISTTTGVNHPRTSWKALQKFPISLPPLDEQREIARMLQAVDAKIAAEQARRAALEELFKTLLHQLMTGQIRVSNITGAQQSGDPATGIGPFPQSED
>NC_009523.1|WP_041333709.1|3342551_3343805_-|hypothetical-protein
MSRTSTERLLQQQIQTLFPRLSRHRRRALARWVLGALLAGSANRPALAPALATAGIARAATLADAWDAWIAAPAHRIDTADPPAAGAPPVVSPLACGADLLRWIRAHWTGGPLVLGLDASHRRADVVLLRMSVLYRGAALPVAWVIVPANQPGAWEPHWERMLRWARSALPRDQEVLTLADQGLWSPRLWHAIRSQQFHPIMRVRTTSTFAPTGQARQSVLRLAPGPGHGWVGVGVAFTHAPKRIAGTLAVAWGADHAEPWAPLVERSAARVDAAWYALRSWDEAGFRQSTSMGWDWQRGQVTDPDAVAWQYLVVATVTLWTVAVGTRIDDAEQQGVPPGRLKRAPPTTGAPPRRRWSGTAQRVISLLRRGAGRRLRWLLAQGRCWVRLWLRPEPLPKIGDSVTMHIYDPSQCLKSP
>NC_009523.1|WP_011957409.1|3344497_3346069_-|type-I-restriction-modification-system-subunit-M
MLDISTLETWLWDAACAIRGPVDAPKFKDYILPLIFLKRLSDVFDDEIKRLSDVYGNCGLVLHLLEQERERGQVHLVRFYIPENARWKAIRQRGVRTLGQFLTDAVRDVARENPALQGVINMVDFNATTAGQRIIPDDHLSKLIDVLSRHRLGLQDVEPDILGRAYEYLLRKFAEGQGQSAGEFYTPGEVAILMAQLLDPQPRMTVYDPTCGSGGLLIKCHLRLLETHGVRSGRKFSTATPGVAPLRLFGQEINPATFAMARMNAVIHDLEADIRIGDTMRHPAFVDAAGRLQTFDRVTANPMWNQKFPVETYENDPYERFTLGIPPHSSADWGWLQHMLASLHERGKMAVVLDTGAVSRGSGNQGSNRERDIRKAFVERDLIEAVILLPENLFYNTTAPGIILVVNRRKARRGEILLINASQQFAKGRPKNYLTEEHIARIADIYHQWRVGANNHSPLHTIITTDEAARNDYNLSPSRYVSVNGKEDVLPLEEAVVRLQEAEEERAEADRALNEVLRTLGVL
>NC_009523.1|WP_011957410.1|3346279_3347536_+|phosphoribosylamine--glycine-ligase
MNVLLIGSGGREHALAWKLAQSPLLDTLFIAPGNPGTAQIGRNVPVDALNIPMVIEVAQRERIGLVVVGPEAPLAAGLADACLRAGIPVFGPTAAAARIESSKAFAKRLMIDARIPTAEARIFDDPDAAVEFVRSSGRVWVVKADGLAAGKGVIVPETVSETVDAIRLLGATRAGARLLLEERLSGPEVSLIALCDGERALPLILAQDHKRLRDGDAGPNTGGMGAYAPALHLTFSDVAGLTASIILPTLRALAAAGSPFRGALYAGLMLTEHGPRVLEFNARFGDPEAQAILPLLQGDLLAALLACAGKGELRDGMVHWNGYTAACVVLAAEGYPDTPRRGDVIDGIDAVTDPHVSIFHAGTAWENNQLVTAGGRVLGVTGIGASLREALTRAYAAIDLIHFRGMHYRRDIGARAIQ

Crispr_ID: NC_009523_62

• CRISPR_ID: NC_009523_62
• CRISPR_location: 3475641-3475747
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_62

Consensus_repeat	Method
TAGCGGATTATTTATTCAAAGACCATAAGCCCTCGGCTA	CRISPRCasFinder

spacers of NC_009523_62

>62.1|3475680|29|NC_009523|CRISPRCasFinder
GGCAAGGCGAAGCCCGCCTGCGCGGGCTG

CRISPR arrays and Neighbor proteins around NC_009523_62

CRISPR arrays

The CRISPR arrays of NC_009523_62

>merge|NC_009523|62|3475641-3475747|CRISPRCasFinder
TAGCGGATTATTTATTCAAAGACCATAAGCCCTCGGCTAGGCAAGGCGAAGCCCGCCTGCGCGGGCTGTAGCGGATTATTTACTCAAAGACCATAAGCCCTCGGCTA

>NC_009523|62|59|3475641-3475747|CRISPRCasFinder
TAGCGGATTATTTATTCAAAGACCATAAGCCCTCGGCTA	GGCAAGGCGAAGCCCGCCTGCGCGGGCTG
TAGCGGATTATTTACTCAAAGACCATAAGCCCTCGGCTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957510.1|3480134_3480437_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957494.1|3466331_3466751_-|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|107221
NC_009523.1|WP_011957501.1|3472030_3474253_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957507.1|3478919_3479183_+|zf-HC2-domain-containing-protein	unknown	unknown	gnl|CDD|379219
NC_009523.1|WP_157041091.1|3471755_3472001_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957495.1|3466801_3467698_-|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl|CDD|274680
NC_009523.1|WP_011957499.1|3469544_3470282_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957506.1|3478324_3478930_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|237024
NC_009523.1|WP_011957496.1|3467808_3468159_+|50S-ribosomal-protein-L19	unknown	unknown	gnl|CDD|235418
NC_009523.1|WP_011957497.1|3468185_3468890_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009523.1|WP_011957498.1|3468864_3469548_+|ribonuclease-HII	unknown	unknown	gnl|CDD|260003
NC_009523.1|WP_011957504.1|3477264_3477606_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957508.1|3479225_3479828_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|237024
NC_009523.1|WP_157041326.1|3470205_3471348_+|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl|CDD|236435
NC_009523.1|WP_011957511.1|3480761_3482393_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|238119
NC_009523.1|WP_011957509.1|3479860_3480145_+|hypothetical-protein	unknown	unknown	gnl|CDD|379219
NC_009523.1|WP_011957512.1|3482415_3483354_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011957505.1|3477612_3478218_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_009523.1|WP_041335472.1|3476055_3477084_-|ribokinase	unknown	unknown	gnl|CDD|238577
NC_009523.1|WP_011957493.1|3463926_3466335_-|endopeptidase-La	unknown	unknown	gnl|CDD|223542

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957494.1|3466331_3466751_-|Hsp20/alpha-crystallin-family-protein	gnl|CDD|107221	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.	1.77844e-18
NC_009523.1|WP_011957507.1|3478919_3479183_+|zf-HC2-domain-containing-protein	gnl|CDD|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	6.01472e-08
NC_009523.1|WP_011957495.1|3466801_3467698_-|LLM-class-F420-dependent-oxidoreductase	gnl|CDD|274680	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity].	4.8541e-100
NC_009523.1|WP_011957496.1|3467808_3468159_+|50S-ribosomal-protein-L19	gnl|CDD|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.26817e-61
NC_009523.1|WP_011957505.1|3477612_3478218_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.9734e-23
NC_009523.1|WP_011957497.1|3468185_3468890_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.68509e-23
NC_009523.1|WP_011957498.1|3468864_3469548_+|ribonuclease-HII	gnl|CDD|260003	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like. This family includes mostly bacterial type 2 RNases H, with some eukaryotic members. Bacterial RNase HII has a role in primer removal based on its involvement in ribonucleotide-specific catalytic activity in the presence of RNA/DNA hybrid substrates. Several bacteria, such as Bacillus subtilis, have two different type II RNases H, RNases HII and HIII; double deletion of these leads to cellular lethality. It appears that type I and type II RNases H also have overlapping functions in cells, as over-expression of Escherichia coli RNase HII can complement an RNase HI deletion phenotype. In Leishmania mitochondria, of the four distinct RNase H genes (H1, HIIA, HIIB, HIIC), HIIC is essential for the survival of the parasite and thus can be a potential target for anti-leishmanial chemotherapy. Ribonuclease H (RNase H) is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication and repair.	8.14788e-102
NC_009523.1|WP_011957511.1|3480761_3482393_-|extracellular-solute-binding-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	7.576e-27
NC_009523.1|WP_011957508.1|3479225_3479828_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|237024	PRK11922, PRK11922, RNA polymerase sigma factor; Provisional.	3.65534e-45
NC_009523.1|WP_157041326.1|3470205_3471348_+|3-deoxy-7-phosphoheptulonate-synthase	gnl|CDD|236435	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated.	0
NC_009523.1|WP_011957509.1|3479860_3480145_+|hypothetical-protein	gnl|CDD|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	1.40646e-07
NC_009523.1|WP_011957512.1|3482415_3483354_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	6.87634e-15
NC_009523.1|WP_011957506.1|3478324_3478930_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|237024	PRK11922, PRK11922, RNA polymerase sigma factor; Provisional.	1.96772e-43
NC_009523.1|WP_041335472.1|3476055_3477084_-|ribokinase	gnl|CDD|238577	cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.	5.23729e-37
NC_009523.1|WP_011957493.1|3463926_3466335_-|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0

Protein sequences

>NC_009523.1|WP_011957501.1|3472030_3474253_+|hypothetical-protein
MIVIRPLLIICFVIASAINIGIAAPITVITDPPAPEPTPDAPADDPLTPDSRLDVDGHTHSRLDLIGRNVTLDPHEEPIVSPQSQSGGWQNLGTGLQGLNGSVYAIAVSGSDVYVGGRFTNAGGVNGANNLARWDGSQWHAVGGTNAITGTVYAIAVSGGDVYIGGNFTNVGGVDGADYLVRWDGRRWHAVGAPGAINGPVNAIAVSGANVYVGGDFTNAGGMPGANYVARWNGTQWSGLLSGTFGISNTVNTIAISGTHVYVGGDFTDAGGVPGADYVARWNGTQWSGLLSGTFGISSTVNTTVNTIAISGTHIYVGGDFTDAGGVSGADYVACAILSGTTSVTWTDLLDSTFGISGTVNAIAISGGNLYVGGAFTDAGGASSADRIARWDGSRWHAIGTGVDNHVRALVVRGTGVYVGGDFPGAGGMPGTNHLARWDGARWRPVGDEIVISSIAVSGTDVYVGGAFTRIGGVSGANSLARWDGSQWHAVGPPGAITGTVYAIAVSGGNVYIGGNFTNAGGVPGANAIARWDGSQWHAVGPPGAITGTVYAIAVSGGNVYIGGNFTNAGGVPGANAIARWDGSQWHAVGPPGAITGTVYAIAISGNDVYVGGRFTNAGGVPGANNLARWDGAQWHALGDGNQTLNSISTIAISGNDVYVGGSFSSIGGVSDLDFLARWDGTQWHAVGGTNAINDSVYAIVISGNDLYVGGNFINAGGNPYADYVARLTQFRVYLPLTVR
>NC_009523.1|WP_157041091.1|3471755_3472001_+|hypothetical-protein
MDRILKAVVVISIFQIADNAPCNYLSHTRHPGNQQQAAPLLSLSRRPTAFWQFHAPLSVAHHQYTKQRTRRPTSQRDTGWL
>NC_009523.1|WP_157041326.1|3470205_3471348_+|3-deoxy-7-phosphoheptulonate-synthase
MRNSHCGNVTTSLVPSQSPKTQNINNSKEYIHVRPVDNLHVLAFEALTPPRVLRERYPITEAAAQTVYETREAIKRIMQREDRRLLAVVGPCSIHDTDAALDYARRLLRLAIEMRDRIVIVMRAYFEKPRTTVGWRGLINDPHLDGSFDMNEGLRRARELLLHINTMGLPTATEMLDPISPQYITDLISMTAIGARTVESQTHRALASGLSMPVGYKNSTDGNVQVAINAFLAARQAHSFLGIDQEGRSCVVRTTGNPDGMIILRGSSAGPNYDAETVTRTEQAMRAAGLSPAIMIDCSHANAGGDYRRQPQVWRDVLRDHIASSNAVIGMMVESNLYEGKQPIAADLTQLRYGVSVTDACVGWETTERMLIEAYEAVGR
>NC_009523.1|WP_011957499.1|3469544_3470282_+|hypothetical-protein
MSLETTAGNYVRQLQHAGLRPGRRLVDLILASGDAAVDPLIDLATSIPLLDEKPPVAYAPIHALRLLGELRPLRMVEPLLKSTDAAFAGLSHARDIWQQDMPQMIGRLGGSAVALLWTCVDDPNRSDIEHDMALLALAYATVIDEDVREPVVAGLHQRLMAGDDRALNAGIVRAMAYLKLADMYGDVMARYRAGAVDQESMPAATARQMLLTTATSRVADDAKLSLWERYDEFGPFPEPEDTEYQ
>NC_009523.1|WP_011957498.1|3468864_3469548_+|ribonuclease-HII
MIRICPTVEEERALRAAGYRAIAGLDEAGRGCLAGPVVAAAVILPDAVIDTPDVLDGVADSKMLSPAQRADLFERITSLAVAWAVGATPAHIIDSHGILPATRLAMQVALLRLPRPADALLIDAVTLDNWPLPQRALIKGDARCLSIAAASIIAKVTRDRLMDALDACWPQYGFASHKGYGTVQHQQALRRYGPTPHHRRTFRPLCDWLATDAADEGLADGTGRSIL
>NC_009523.1|WP_011957497.1|3468185_3468890_+|class-I-SAM-dependent-methyltransferase
MAVGAPGSLYARLIRWGFARFYHEFAWTYDTVAALVSAGQWRNWTLTALKFARGATLELGCGTGYVQLALAQCHTGSRVGLDRSPSMIRLTRRRLQRSGFPASLVRADAGALPFASASFDTVLATFPSDYIAAETTIVEIRRVLRPGGTVAIAVWARFADDSPYARLVDVAYRLTLQRSPRNPTSDASIVLQRFAALFERAGLETAFSEVQAPGGIVQYVIGTYQKHDPHLPDS
>NC_009523.1|WP_011957496.1|3467808_3468159_+|50S-ribosomal-protein-L19
MSQQIIEEIERRYMKQDVPEFDVGDTVRVGVRVVEGNRERVQEFEGVVIRKRGSGLNQNFTVRRIASHGIGVERTFLVHAPRVESIQVVRRGKVRRARLFYLRGLTGKAARIKERR
>NC_009523.1|WP_011957495.1|3466801_3467698_-|LLM-class-F420-dependent-oxidoreductase
MNEPLEIGVTFPQTEIGADPGAIRAYAQAVEALGYRYILAYDHVLGADVSVRPGWSGPYTSESMFHEPLVLFGYLAGITAAIGLVTGVIILPQRQTALVAKQAAEVDVLSGGRLRLGIGIGWNEVEYRALGQHFHDRGARSEEQIAVLRALWAETVITFHGRWHTIEAAGINPLPPRRTIPIWIGGYAEATLKRVARIGDGWITFRPPDETMRAAIARLSDYARDAGRDPATIGIESQLSLRSVAEDRWQAYVDGWRALGARYLCLNTMGMGLTSVDQHIAVLQRAAETLGISATDAA
>NC_009523.1|WP_011957494.1|3466331_3466751_-|Hsp20/alpha-crystallin-family-protein
MIFDDNPHASIRILRTRMPYAPFDMRPWSPAMNIFETDESMLLVVELAGVEPANVQIEAHPQFVRITGVRQIALPHDLRRLHRMEIASGAFQIEAPFDRPIDPDRTTARFNNGLLEIWLPFAGRGTRQIVIHVRQEGEP
>NC_009523.1|WP_011957493.1|3463926_3466335_-|endopeptidase-La
MSTPTPPQNAPEIPEILPVLPLNNVVLFPGMFLPLVVSGDMWVKLVDEAALSTKMVGVFMRTQPGEGFDPLALARTGTAALIVRMLRLPHGAVQILVQGQARIQIMQLIVSEPYPQARMSIHRDPAVLSVEVSGLARAALAAFQQIIQLSPTLPDELAIVAANTAQPGMLADLIAANLNLKPEDQQLVLDTLDVQDRLRQVLSFLEREREILTIGRKAQEEMSKSQREYVLRQQLEAIRRELGETDEHAAEIAELRRRLEAANLPEEARKEAEREISRLERMPPGAAEYVVSRTYLDWLLDLPWNVSTEDNLDLAQARQVLDEDHYDLERIKERIIEYLAVRKLRLEQNATGSARGPILCFVGPPGVGKTSLGASIARALGRKFVRVALGGVRDEAEIRGHRRTYIGALPGRIIQGINRAGSNNPVFMLDEVDKLSVGFQGDPAAALLEVLDPEQNAAFVDRYLDVPFDLSRVLFICTANRSDTIPPALLDRMELLELAGYTEMEKLEICRRYLIQRQRSEQGLAERGPTITEAALRRLIREYTHEAGVRDLERRIGAIYRKMATRAAEGQSLPDQVDAPDLDDLLGPPRFRSETLLGEDEVGVVTGLAWTPTGGDVLFVEASVVPGNGQLTLTGQLGDVMKESARAALTYARSRARSLNIPTDFAQICDIHIHVPAGAVPKDGPSAGITMASALISALTERPARKHVAMTGEITLRGKVLPIGGVKEKLLAAQRAGVHTVLLPKANAPDLREIPEETRQHLEIILVEHMDEVLPHVLHPRSEPATQPELTPADGMGTAQTT
>NC_009523.1|WP_041335472.1|3476055_3477084_-|ribokinase
MDENRLQDIVLRWAQTRVLVVGDFVLDRRLQIDPARIERSEETGLPAHQVVAVTIDPGAAGRVAAVLRALGSAVITLGVIGDDGDGYELRRSLRALGIDERAMVVAADRHTATSIHPVNQSATALSYDLERLDIRSRSPLAPSTTAALIERLRSLVMQVHAVIVVDRIPDDECGVVTLRLRLEIADLAARYPDVWFLAHSRWRTGLFRNVIVVPNARECVRAVYASDSDHPPLALVGQAAGQLHRRTGKPVIVTLGLRGMLVIHNDGMTHIPAIPVTGPINAVGANDSALAAVAVALCAGATLDEAAQAGNLAAAAAMRSGATDGVAPDQIVALWRAHHKYS
>NC_009523.1|WP_011957504.1|3477264_3477606_+|hypothetical-protein
MIMLAQAMRLLRTIVGWICIIGGLLLSISPIPFGFLVVIAGILLVGPRDRGLRRMRAWWNRSIRSLASSSIPFVAALAQRIIAFQTSIEQHIRQWMATRSPSHIAPRRASAEE
>NC_009523.1|WP_011957505.1|3477612_3478218_-|class-I-SAM-dependent-methyltransferase
MTDPMTRFQRLQQRYRDGDIPWDHELPPPEVIAVAAELPPGRVLDLGCGTARACVYLAARGWQADGVDFVPEAIDLAEERVRRAGVAHRVRLFTAPVTNLHFLSEAYDLVLDVGCMHGMSGEELQAYASEVIRLTRPGGLYLLFAHLNDGTSSEMSRWIAKGEVERLFLPAFSVERVEHGITHVCDTTWPSAWYWLRRRSC
>NC_009523.1|WP_011957506.1|3478324_3478930_+|sigma-70-family-RNA-polymerase-sigma-factor
MNDESALIAGLRQRDPQAFATFFEQYADRIYRLAYGIVGNEADAEEALQSTFISALEAIDRFEQHARLGTWLYRIAYNHALMILRRRRPEESLPDEDGPLPMPSALTDWSTLPEDRLLSSEAQEILRNAIAELPITLRAAFICRDIEGFSTAECAQIIGVSEGALKVRLHRARLALRERVSEYFGEWVASPSSRGDHDHDV
>NC_009523.1|WP_011957507.1|3478919_3479183_+|zf-HC2-domain-containing-protein
MTCEEVIAHLSSYLDHEMDAALAAEMQEHIAQCRNCRVVLDTTQRLIVLLHDEGRHIIPMGERSALFDRLQQAFLNRPPASDSNTTV
>NC_009523.1|WP_011957508.1|3479225_3479828_+|sigma-70-family-RNA-polymerase-sigma-factor
MPGLTIDLTIYDDEEALLAGLRRREPDACACLIKRFAPLVYAQALRLLGDADEAEGALQQTFIKACDKLDTYEGRSGLGSWLYRIATNEALMLLRQRSPRVAIDHVADTIQADEIPQHLTPWTLDPAAAALNSELRATLEQALMTLPETLRIVFVLRDLQGLSTEETAAMLGLGESAVKVRLHRARLRLRELLSTYMQEH
>NC_009523.1|WP_011957509.1|3479860_3480145_+|hypothetical-protein
MDTPHHRHDDLDRCRAILAQLNDYLDGELAESLCRELEYHLASCPDCRTVYDTLSRTIHIYRALRDEPLDLPPGVEARLMARITLTLQEKTHDP
>NC_009523.1|WP_011957510.1|3480134_3480437_+|hypothetical-protein
MIRDIESFRASLQGDAPPPDLSGALKALWYDARGDWNAAHRAAQDDDSLDGAWVHAYLHRKEGDLANAGYWYRQAGRPVASGSLDAEWLQIARVLLLSEE
>NC_009523.1|WP_011957511.1|3480761_3482393_-|extracellular-solute-binding-protein
MRNNISLLLLLIAGLVISGCGNPTDGGGVPANAITITITYSPEKDEWLKDRIAAFNRAREQVDGQPIVVEGINKSSGAARTEIRNGQLKTTIWSPSASTWLEVLKYESGNPNVAVSNQPLVLTPVVISMWRPMAEAMGWPEKSIGWSDMLTLIEDPRGWGAYGHPEWGRFSWGHTDPEISTTALSTLLAEFYAATGKQRDLTVADIQRPESQEFIRKLGKGIKHYGYNTLVFSENMRKFGMGYISAFPMEEITLIDFNKNKNPPTPLVAIYPREGTFWHDNPFIIMATASPQERQAAERFYDFLLSVESQQLAMSYGFRPANVDVPLADPISLAYGVQPQGVQSVLPTPPAEVIVAAKNAWSINRKRADILLVVDVSGSMEGEKLEAAKSGLGTFLSRILPEDRVGLIVFSTDARVVVPPAPLSEARIALDDAIAQLNARGKTALYDALITGKQVFDDLPPPDEERIRAIVLLSDGLDNASRTTLDQVRLAFDETGISIFPVAYGSDADLAALEQIATFSRTIVVQGDTGDIGQIFENLSRYF
>NC_009523.1|WP_011957512.1|3482415_3483354_-|Uma2-family-endonuclease
MTRTTAHRPPAPDTPPETDPFRYGWRLVPRPTPDDPYNLEQVPLTLEDVLHPETGDFIVHSDRHETDRMYLTAVLRARLESAGVAIVLSDVRIAWDIPDLRPHGPDVMVIPGVAERQDWSTFDVAVEGARPALIIAITSPETRANDLEIKVDHYARAGVAQYVIVDDARRRGGKRRLRLLDYRLEAGAYRLHAPDAARRVHLVIANLWLGVEGDHVVCYDERGAAFGEYATVVRQAAEAAERAQREAQARREAEGHAQREAERAQREAEARARREAEIRAHREAEERAALAARLRDLEAELRRLRSRDGTDG

Crispr_ID: NC_009523_63

• CRISPR_ID: NC_009523_63
• CRISPR_location: 3639479-3639574
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_63

Consensus_repeat	Method
TTACTCAAAGACCATAAGCCCTCGGCTA	CRISPRCasFinder

spacers of NC_009523_63

>63.1|3639507|40|NC_009523|CRISPRCasFinder
GCCAGGGCGAAGCCCGCCTGCGCGGGCTGTAGCGGATTAT

CRISPR arrays and Neighbor proteins around NC_009523_63

CRISPR arrays

The CRISPR arrays of NC_009523_63

>merge|NC_009523|63|3639479-3639574|CRISPRCasFinder
TTACTCAAAGACCATAAGCCCTCGGCTAGCCAGGGCGAAGCCCGCCTGCGCGGGCTGTAGCGGATTATTTACTCAAAGACCATAAGCCCTCGGCTA

>NC_009523|63|60|3639479-3639574|CRISPRCasFinder
TTACTCAAAGACCATAAGCCCTCGGCTA	GCCAGGGCGAAGCCCGCCTGCGCGGGCTGTAGCGGATTAT
TTACTCAAAGACCATAAGCCCTCGGCTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157041099.1|3623166_3624840_+|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173847
NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	unknown	unknown	gnl|CDD|133459
NC_009523.1|WP_011957614.1|3621575_3622049_-|response-regulator	unknown	unknown	gnl|CDD|381104
NC_009523.1|WP_011957617.1|3624853_3634585_+|type-I-polyketide-synthase	unknown	unknown	gnl|CDD|225858
NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein	unknown	unknown	gnl|CDD|224720
NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein	unknown	unknown	gnl|CDD|236307
NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl|CDD|234816
NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein	unknown	unknown	gnl|CDD|274132
NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein	unknown	unknown	gnl|CDD|259988
NC_009523.1|WP_011957613.1|3620812_3621166_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|223706
NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein	unknown	unknown	gnl|CDD|379816
NC_009523.1|WP_041335499.1|3646337_3646670_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957619.1|3635412_3636957_+|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl|CDD|227136
NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein	unknown	unknown	gnl|CDD|239266
NC_009523.1|WP_011957615.1|3622494_3623037_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957612.1|3619364_3620327_-|IS110-like-element-ISRfsp2-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011957618.1|3634654_3635416_+|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl|CDD|225002
NC_009523.1|WP_157041100.1|3648103_3648340_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_157041099.1|3623166_3624840_+|acyl-CoA-dehydrogenase	gnl|CDD|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	2.67806e-92
NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	gnl|CDD|133459	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine.	1.65958e-27
NC_009523.1|WP_011957614.1|3621575_3622049_-|response-regulator	gnl|CDD|381104	cd17552, REC_RR468-like, phosphoacceptor receiver (REC) domain of Thermotoga maritima response regulator RR468 and similar domains. Thermotoga maritima RR468 (encoded by gene TM0468) is the cognate response regulator (RR) of the class I histidine kinase HK853 (product of gene TM0853). HK853/RR468 comprise a two-component system (TCS) that couples environmental stimuli to adaptive responses. This subfamily also includes Fremyella diplosiphon complementary adaptation response regulator homolog RcaF, a small RR that is involved in four-step phosphorelays of the complementary chromatic adaptation (CCA) system that occurs in many cyanobacteria. Both RR468 and RcaF are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	4.09727e-05
NC_009523.1|WP_011957617.1|3624853_3634585_+|type-I-polyketide-synthase	gnl|CDD|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	2.68514e-172
NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	0.000180997
NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein	gnl|CDD|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	2.08516e-176
NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein	gnl|CDD|259988	cd13921, Amicyanin, Amicyanin is a type I blue copper protein that plays an essential role in electron transfer. In Paracoccus denitrificans bacteria, amicyanin acts as an intermediary of a three-member redox complex along with methylamine dehydrogenase (MADH) and cytochrome c-551i. The electron is transferred from the active site of MADH via the amicyanin copper ion to the cytochrome heme iron. The electron transfer from MADH to cytochrome c-551i does not involve a ternary complex but occurs via a ping-pong mechanism in which amicyanin uses the same interface for the reactions with MADH and cytochrome c-551i.	0.00224591
NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein	gnl|CDD|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	2.4118e-21
NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein	gnl|CDD|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	2.06249e-17
NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein	gnl|CDD|223706	COG0633, Fdx, Ferredoxin [Energy production and conversion].	4.41428e-15
NC_009523.1|WP_011957619.1|3635412_3636957_+|acyl-CoA-carboxylase-subunit-beta	gnl|CDD|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein	gnl|CDD|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	3.19876e-59
NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA	gnl|CDD|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	3.57145e-109
NC_009523.1|WP_011957612.1|3619364_3620327_-|IS110-like-element-ISRfsp2-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.56837e-20
NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	5.34721e-21
NC_009523.1|WP_011957618.1|3634654_3635416_+|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl|CDD|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	5.10124e-11

Protein sequences

>NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit
MSKLSITIDGRTFTVETPPLPRTTGEMTVQVDGQTVNVLVHDTGSSELLDWLIVEGRPYELVIDPNLRWIRSRFGLHQVEVRDLESTIARPASGDGRIKAPIPGLITRVLVSPGEPVEVGQPLLVLEAMKMENEIRAPRSGRVTQVNVAAGQSVALGMVLAEVE
>NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein
MFRTLLVANRGEIAVRIIRTCRDMGIRTVALYDDTDLSSLHVRLADACVRLSSGAIYHDAPALVQIARDCGADAIHPGYGFLAEHDEFARACEEAGIAFIGPSSTALARVRDKIATLETVRAAGFAVPRHSPQAYRASEWEALRAAAGRLGYPLVLKSYSGGHGHGTRLVREPTHLESIAQHAHSAALTASGDDRLYLEEAFLPARYLEVQIVGDRYGNLVHLGERDGTIQHNHHKVVAESPAPYLTDAQREDLWRQALAIGRLLGCSNICTIEFVLDAQGHVYFTEVKTRIQVEHPVTEMRTGIDLVRTQIRIAAGEPPGFSQDDVALRGCAIQARINAEDPWNDYLPSPGRLRRFRFPGGPGVRVDTYAYGGCDVPVRYDPLLAKVIAWDDTRAGALQRLRRAVADFAISGVQTNLPLVQRILDTPEFTAGTYDSEFNRQPLPGAEVPDDHLRDLAVAAALAYLRRRSDTAGALPNRAGSGWHRDSRRLPQ
>NC_009523.1|WP_011957619.1|3635412_3636957_+|acyl-CoA-carboxylase-subunit-beta
MTSMQEYIEKLRQRKAIARGTAQDVEAQHKKGRLTARERIDLLFDPGTFEEIDTLVLPRYDVYPGGKRSRYGDGVVTGFGLINGRRAFVAAQDASVMGGSLGEMHANKIVKAMHMALKYGCPFIAINDSGGARIQEGVDSLGGYARIFDANCEASGVIPQLSLIMGPCAGGAVYSPALTDFIFMTENAYMFITGPEVVRAVMQEDVTQEQLGGGRVHAEESGVSHFLARDDQECLAMARELLSYLPLNNQDDPPYVRPVDDPERRCPELEEIVPVDPSKPYDVRKVISSILDDGRFFEVHALWAQNMVVGFGRLNGYVVGIVANQPMVLAGCIDIKASIKAAHFIRICDTYNVPIITLQDVPGFLPGTNQEYGGIIRNGARMIYAYSEAVVPKLMIILRKSYGGAYCVMSSKGLRGDLLYAWPNAELAVMGAAGAVNILYRNEVKSAPDPEAKRRELVEEYQERFNNPYVAAARGLIDDVIEPRDSRRVLIKALEVTLSKRERHVPRKHGISPS
>NC_009523.1|WP_011957618.1|3634654_3635416_+|4'-phosphopantetheinyl-transferase-superfamily-protein
MMHWLIQTLADHPALARAEVPEGMLSMGEQVRFQSLKRDKRRRDWLLGRWTAKRLTAQYIESITGRRPALSDIVITTDPDGAPRLHSRNGYAFINRLAISISHSHGYAFCALTDVPGRHPGADIEYIEQRNPAFVSDFFTDVEIERVHRAPPSAQPLLTTAIWSAKEAALKSIRRGLTVDTRCIICLPEEPVADGWSPVTVICSPELNATVRCGWWRQIGRFVLTLATADSEQATHAAVPIAEVQRIGDGVSP
>NC_009523.1|WP_011957617.1|3624853_3634585_+|type-I-polyketide-synthase
MSDSAERAIAIVGVGAILPDAPNAPAFWNNILNKRYSITETPPERWSIADYYDPDPAAPDKTYSKIGGWVRGFTFDWKRFKIPPRVAAAMDEGQQWAVTIAAEALADYGYPERPLDTDRTGVILGTAMGGELHYITHQRIVFPDYVHLLERTEAWRRLPRDVQQALIAQWHAELDRSLPPVTEDTMPGELPNIVSGRVANVLNLRGPNFITDAACASTLAAVDAACEQLIHHQCDAVLTGGVDRNMGASTFVKFCKIGALSATGTRPFGDGADGFVMGEGSAAFLLKRLADAERDGDRIYAVIRGVGGSSDGKGKGITAPNPIGQILAVERAWQDAGLDPATATLVEAHGTSTRVGDVVEVESLSSCFGRAERGSIGLGSVKSNIGHLKAGAGAAGLLKAVMAIYHKILPPTLNCEKPNPNINFNATPFYLLTEAREWERRGNTPRRAGVSAYGFGGTNFHVVLEEYIPGMIRTEPKVYASAAVPQTGTTSSTTAAMGVASSTVTASAPPPTGPKLRSAKMPLRGILAIGAPTPKALKDKIDAIYQKVEGGWTPPVAPPDPNELAQPERVVIDFGNHDELLDRLKKAQKAAGFDSPAAWKSLQAQGVFRGSGPKPGKIAFLFPGQGSQYVNMGRELLSEPAFAEVIKEGDAVMTPILGKPLTSYIYVDANDPDALKKAEYDLMQTAITQPAMLMLDAALCRLLKEYGFEPDMVMGHSLGEYAALNAAGIMPFAEALEASAARGAEMSKVKVDDNGWMAAVMGPLDVVLSTLNEIDGYVIPANINSYNQVVIGGASKAVERAIEVFTQKGYQAQRIPVSHAFHTRIVAPASGPLRKQLDRFHIAPPRIPLVANVTGELYPTTVEEIKDILEKQIASPVQWVKGLETLYREGVRCFVEVGPKKALKGFVDDVLGNKPDVVSLFTNHPKTGTLQSFNQALCGLYAAGYGLADETIDARQDGATQSSATVAATVASAAPSVASASAPVVSASASASAPVVSAPVSTPAPVASATAVASAPARPTTEEANMVNGIPIDTLGKLLVQALQGAQAVHPATPGAPVYDRNLPPTGSVVISGTGLGLPGAEKPVMDEQNALRILHGEQFIDLIPERFRRQMLAHNITRVVKSEDGSGSFETLTEPDEVIRLAGRPGPFNLSEEYGVPAKLVEALDSTTQLAMAAGLDALREAGIPLVQTYRRTTTGKDLPDRWMLPEALRDETGVIFASAFPGLDRVAEEFERYYTYEHRREQLEMLEALRQTTTDPATLSEIVRRIGELRSLLEREPYVFDRRFLFRILAMGHSQFAEYIGARGPNTHVNAACAATTQAIAIAEDWIRTGRCRRVLVIAADNVTSDHLLGWIGAGFLATGAAATDDRVEEAALPFDRRRHGMILGMGACALVVESEDAVRERGMRGIVEVLSTEAANSAFHGTRLDVEHISSVMNSLMTAAERRFGIDRRTIAPHLVFVSHETFTPARGGSASAEVVALRKTFGEAANQVIVANTKGFTGHPMGVGIEDVIAVKILEHGIVPPVPNYKEVDPDLGTLNLSRGGRYPVQYALHLAAGFGSQIAMTLLRRVPGSIDRIDNRARYDYWLDQVSGYDHAETEVVKRVLRIKAQGAPARRPAPSTWQPGTGPTLRAAAPGDSVTVAPATIQYAPAPQPTPVAPPPPPKPVEPPAPVAPAPINGKPVETAPVAPPPPAPEPVVAPPVAPAPAPVAPAPAPVAPAPAPVTAAPAMDGVTAKVLQIVAEKTGYPPEMLDLDLDLEADLGVDTVKQAETFVAVREAFGIPQVENLRLRDFPTLRDVVGFVYKQKPELKPSAPSVAAPAVAAPPAPAPAVAPAPTSVPAPAAAPAVDPVAAKVLAVVAEKTGYPPEMLDLDLDLEADLGVDTVKQAETFAAIREAFGIERIENLKLRDYPTLRHVIDFVYERRPDLKPLAAPAPAPAMAMAAAAPVAAPAAPAAAPAPAADPVAAKVLAVVAEKTGYPPEMLDLDLDLEADLGVDTVKQAETFAAIREAFGIERIENLKLRDYPTLRHVINFVYERRPDLKPSAAPAPAPAMAMAAAPAATSAPVTAPVTPAAAAAPVADPVTERVLAVVAEKTGYPPEMLDLDLDLEADLGVDTVKQAETFAAIREAFGIERVEDLKLRDYPTLRHVINFVYERRPDLKPTAAPTPEPAAPPVAVAAATPAPATATTVAADPVTAKVLAVVAEKTGYPPEMLELDLDLEADLGVDTVKQAETFAAIREAFGIERVEDLKLRDYPTLRHVINFVYERRPDLKPTAAPTPEPAAPPVAVAAATPAPATATTVAADPVTAKVLAVVAEKTGYPPEMLELDLDLEADLGVDTVKQAETFAAIREAFGIERVEDLKLRDYPTLRHVINFVYERRPDLKPTGEASATPVAPVADPSAPTAPAPAARPAVTLVPVENADMVPRRVVVPALRPPIELCKPTGVVLDGNTRVVVMMDRGGVGKALLNRLEKRGVGTLVFDEPPSAEALEQQLKGWLAEGPIHGVYWLPALDVEPAIEDMDLATWREHNRVRVKNLYLTLRTLYDTLVGPGTFLVSATRLGGLHGYGPEGASAPLGGAVVGCTKSYKRERQNILVKAVDFEPGRKTAEPADLLIAETLFDPGVVEVGYRDGLRYTVTFEERPAVDGTPGMYLGKDTVFVVTGAAGGITSAITADLAAASGGVFYLLDLTPKPDPDDPNIALFRQDKEALKRKLIDDFRAAGERPTPVMIDRKILAIEREEAALRAIEAVQAAGGTAHYFSVNLLDGPGVAAVIADVRERYGRIDVLLHAGGIEISKALPDKEPKEFDLVFDIKADGYFSILNAAKGMPIGAAVVFSSVAGRFGNSGQSDYSSANDLLCKVTSSMRSWRPETRGIAIDWTAWGGIGMATRGSIPKIMEMAGIDMLPPEAGIPTIRRELTQSAFRGEIVVGQRLGILGAEFDETGGLDLSKVDTGGRLMIGSVKAFKLYGGIEVETTLDPKEQPFLYDHQIDGVPVLPGVMGTEAFAELATLLTPGFRVASITEQFSSPFKFHRSQPRTLYMSATIHPTGHGTLVAKTTLRGMVQPRPDMPPRFDTHFVGEVYLTTAPVEERTINFTPPSAEALDIDRERIYRVYFHGPAYQVMERVGVMGDQAVALMTDGLPPNSVPETPMLVAPRLIELCFQTAGMWEMVTHRAMALPAAIGSVTIYRHPESAEGRRLYALVTAINNGSSYDAHVVDTDGNVYVELRGYRTVRLPGEVNV
>NC_009523.1|WP_157041099.1|3623166_3624840_+|acyl-CoA-dehydrogenase
MYRAVRCEEEQAMTTLDVETLDMVLATLREYAARKLTPEYLRQLDHNDEFPAEVLKDLYDPDKLGIHLLFIPEEYGGLGGGAYDIYRVSEAMAAIDLGIATGVLATFLGTDPITVGGTEEQKKYWMGRIAEEGLLVAYGATEPQAGSDLATLTTKAVPVVEDGKVIGYKISGRKQWISNGGVAKIYTILANAPGGISWFIVEHDAPGFTKGKPEDKHGIRASNTAALFLDEVFVPADRLVGGVEGKGLAQAAAVFGYTRLMVGSFGLGAGWEAMRRAIRYAQTRIQGGKPLSQQQGLTHKLIVPNVARLEAARHYIEWVAETIDGGNDQQQTEGAVAKYMATEAGNKAAEDAIQVHGGYGYTKEYMVEKIKRDVRITCIYEGTSEIMEWTIARDRWQLHLKTKGAYYHDWAARVEQAHQREPNNGANVAALAMHALANILERARIDRLTRNQHILFRLGELIAWAETAAIFSERVTSKPTVASGLDLPTEQALARIFARMAAYKVATDGLAWLIGAGQTDPNLANTLNLPAIFAAQAGQIADMDFVAAKLVEAFPAT
>NC_009523.1|WP_011957615.1|3622494_3623037_-|hypothetical-protein
MRNTPHTTPLLIGLALLLVLYLAVSAWIGAGEQERLSRARERIAARALWEGRPFRDYHLVVEDGDCTYDVVVRQGQIAGRYRDSCNLRARTIETLFLVAEGDGTVTPVCGIHGCICETHIRVLATYDPVLGYPRSLVIEATLRPNWRHQDFWRNVLSSGIALCRGASQRTISVLYVAAAT
>NC_009523.1|WP_011957614.1|3621575_3622049_-|response-regulator
MARVVCLSDTVSLVRAVREEIAAWGHTLYPFPCSRLNDALRQAVRQASPDVILLELTGATDNPHIYFFLRADQFTRNVPVIFLSASPDLAMFAEALGANGSLRIPFERAMLRRVLGNYLDMPRVVDTPRIEVPRSTIQRYASLLQRPQLMTVAAPAW
>NC_009523.1|WP_011957613.1|3620812_3621166_-|hypothetical-protein
MAPRPQSAASRARRAQERLRVCGGGDALPAVLTSHDAIACLGRAWFHHLLRHNALPGVQVIRFGVWRCARETFLTWLAEMANEVTLPAEDVVDAPVRSVDTVRTTARVRRRSATTHK
>NC_009523.1|WP_011957612.1|3619364_3620327_-|IS110-like-element-ISRfsp2-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPLETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTINRKEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA
MDDNLYRQRAAEHALRHVESGMTIGLGTGSTATFMLYGLAARLADGRLQRVTGVPTSEVTAALARELGIPLTTLDRQPHLDLALDGADEIDPQLRLIKGLGGAMLREKIVAASAARFVVMAAVSKCVERLGERSPLPVEVVAFGLPLCARRLKALGGAPALRRDRSGAPFVTDEGNLILDCNFGIIADPEALAASICAIPGVVAHGLFLGMASLAVIAGPDGIVELHAPSARQ
>NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein
MWSHRTALLILALLAAGIAGTGVWYEHQRRNAERYLVFTVPPGSVARLASGEQLDILPQTIELSLRGKDTLVIRNEDVQPIQVGPFKIDPGQQFEQRYYNPGVYELICTLHQSQRLRIVVSRE
>NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein
MLRGFRVFVLLALVTVVSACGRYEFRGVTLDPPKEAPDFTLTDFDGKPFRLSEQRGKIVILFFGFTNCPDMCPAALSDMAAARRKLGADAEKVQGVFVSLDPDRDTPERLKRYVTAFDPTFIGLRGSEAELSPVMQDYGVTSIRRELPDSALKYTIDHSTFIYVIDATGRWRLLFTHGMPVDDIVSDLRYLVRQGGA
>NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein
MRLPMAVFLILSGFYLLTMSGHTYSSDEETMLAVTRGLIERGDVAVVVEDGAPVSALRPGHDGRVYSPYGVLPSLLAIPLHLLGTLIAPSGLQADYASRFTTTMLNCLLTAATCAILVQWTQQLGATGKWALTLAFLYGLATFAWTYARTFFSEPLAALLILGATERAWSAFRVNSPGAQQKTLFVSGLLAGLLPATRIAAAIALPVIGLYVLWETLKTWSAKHEPTAKRVGHRRGAAFAEENPASRQSNVSGLIIWIAGLLPGFALAGWYNLSRFGTLLASGYGSEAFQFTTPLAEGLFGLLLSPGKSVFLYAPPLLLAFPGGFALWRRGERTTVLVIAALFLSHLLLYARWGQWPGGGVWGPRFLLPVVAPVTVLAAGLDILTPMQRLRLRRLIPALVLGGVGFISNLGGVLLNFDTYAVSTPFHTGVYTFSGSPLVGHWRLLIERWAHYSVPPPFCRLGDGLYASEATDNRALPRRTGSSGEVFCTVRRETRITLVLDDRRPDGAPSSQLRLRLNERDQGLLPSGQQRTYHWLVPPGHVHLEIIAQTWNPFETGFSDRNDPLGPAIVALRGQSDDGAALALVDTAVAPLPTLPRPRWAWYYDPPNQHLVDHWLWYLPRSELTVNQALAMGSLVVLTGTISLVIGIRLMLTAIRKRSVQ
>NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein
MPRLTVAGKTAEWSADKRLVNAIEDMGIHIGHRCGGKARCTTCRVTFISGEPDTMTAAEYEKLKERGLLGEYRLSCQILCTHDMEVEAVMTLENQEGWTDTGPRPADTVEPAAEWFPTSTFGA
>NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITARNLLLRLPELGTIKRTEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_041335499.1|3646337_3646670_+|hypothetical-protein
MKIPNADRAVIDAGKLVDYLLNPEHRRGGSKAALLISFGYSSAAWQQLEEALRRDHLSQDVFRVRQSAYGTRYEIRAHLSTPIGQPLMLRSVWQVDTGTDVPRFITAYPD
>NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein
MDFPLYEDVILLIDIPDEGLAAGDVGTVVERHDVPGLEPGYSVEFFDMLGNTVAVVTVAASALRRPTAADRPVVRQARVESPVGDGR
>NC_009523.1|WP_157041100.1|3648103_3648340_-|hypothetical-protein
MRLEPGRLRRRRARADHRVTRTLTMTLSAIGYRLSAIGYWLWYRASRPPEMRRDALSQSGGHGAGVFKENDRPVPGLP
>NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein
MTPFEQQLMERLEDYALRIIAVYNALPDYPASGHQVAQVLGKQLLRSGTSVGANYAEAIRSHSLADKAARQQICIKELEETAYWLRLLVKADLIAALRLESLLAETSELTAIFVASVCKLKNET

Crispr_ID: NC_009523_64

• CRISPR_ID: NC_009523_64
• CRISPR_location: 3645789-3645881
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas3

Consensus repeat of NC_009523_64

Consensus_repeat	Method
CAGGGCGAAGCCCGCCTGCGCGGGC	CRISPRCasFinder

spacers of NC_009523_64

>64.1|3645814|43|NC_009523|CRISPRCasFinder
TGGAGCGGATTATGTACTCAAAGACCATAAGCCCTCGGCTATG

CRISPR arrays and Neighbor proteins around NC_009523_64

CRISPR arrays

The CRISPR arrays of NC_009523_64

>merge|NC_009523|64|3645789-3645881|CRISPRCasFinder
CAGGGCGAAGCCCGCCTGCGCGGGCTGGAGCGGATTATGTACTCAAAGACCATAAGCCCTCGGCTATGCAAGGCGAAGCCCGCCTGCGCGGGC

>NC_009523|64|61|3645789-3645881|CRISPRCasFinder
CAGGGCGAAGCCCGCCTGCGCGGGC	TGGAGCGGATTATGTACTCAAAGACCATAAGCCCTCGGCTATG
CAAGGCGAAGCCCGCCTGCGCGGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|223706
NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	unknown	unknown	gnl|CDD|133459
NC_009523.1|WP_157041101.1|3648817_3649366_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957635.1|3659589_3660252_+|pyrimidine-5'-nucleotidase	unknown	unknown	gnl|CDD|319791
NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein	unknown	unknown	gnl|CDD|224720
NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein	unknown	unknown	gnl|CDD|236307
NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl|CDD|234816
NC_009523.1|WP_041333787.1|3658509_3659259_+|hypothetical-protein	unknown	unknown	gnl|CDD|237974
NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein	unknown	unknown	gnl|CDD|274132
NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein	unknown	unknown	gnl|CDD|379816
NC_009523.1|WP_011957633.1|3655656_3658263_-|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	gnl|CDD|274800
NC_009523.1|WP_157041100.1|3648103_3648340_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041335499.1|3646337_3646670_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957619.1|3635412_3636957_+|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl|CDD|227136
NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein	unknown	unknown	gnl|CDD|239266
NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein	unknown	unknown	gnl|CDD|259988
NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011957618.1|3634654_3635416_+|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl|CDD|225002
NC_009523.1|WP_011957631.1|3649362_3652605_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl|CDD|335469
NC_009523.1|WP_011957632.1|3653264_3654227_+|IS110-family-transposase	unknown	unknown	gnl|CDD|376564

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011957633.1|3655656_3658263_-|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	1.8e-16	54.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein	gnl|CDD|223706	COG0633, Fdx, Ferredoxin [Energy production and conversion].	4.41428e-15
NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	gnl|CDD|133459	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine.	1.65958e-27
NC_009523.1|WP_011957635.1|3659589_3660252_+|pyrimidine-5'-nucleotidase	gnl|CDD|319791	cd02604, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to Saccharomyces cerevisiae Phm8p and Sdt1p. This family includes Saccharomyces cerevisiae Phm8p (phosphate metabolism protein 8) and Sdt1p (Suppressor of disruption of TFIIS). Phm8p participates in the ribose salvage pathway, it catalyzes the dephosphorylation of nucleotide monophosphates to nucleosides, its preferred substrates are nucleotide monophosphates AMP, GMP, CMP, and UMP. Phm8p is also a lysophosphatidic acid phosphatase, dephosphorylating lysophosphatidic acids (LPAs) to monoacylglycerol in response to phosphate starvation. Sdt1p is a pyrimidine and pyridine-specific 5'-nucleotidase; it is an NMN/NaMN 5'-nucleotidases involved in the production of nicotinamide riboside and nicotinic acid riboside, and is a pyrimidine 5'-nucleotidase with high specificity for UMP and CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.09439e-52
NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	0.000180997
NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein	gnl|CDD|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	2.08516e-176
NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA	gnl|CDD|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	3.57145e-109
NC_009523.1|WP_041333787.1|3658509_3659259_+|hypothetical-protein	gnl|CDD|237974	PRK15489, nfrB, glycosyl transferase family protein.	0.000101013
NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein	gnl|CDD|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	2.4118e-21
NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein	gnl|CDD|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	2.06249e-17
NC_009523.1|WP_011957633.1|3655656_3658263_-|DEAD/DEAH-box-helicase	gnl|CDD|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	0
NC_009523.1|WP_011957619.1|3635412_3636957_+|acyl-CoA-carboxylase-subunit-beta	gnl|CDD|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein	gnl|CDD|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	3.19876e-59
NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein	gnl|CDD|259988	cd13921, Amicyanin, Amicyanin is a type I blue copper protein that plays an essential role in electron transfer. In Paracoccus denitrificans bacteria, amicyanin acts as an intermediary of a three-member redox complex along with methylamine dehydrogenase (MADH) and cytochrome c-551i. The electron is transferred from the active site of MADH via the amicyanin copper ion to the cytochrome heme iron. The electron transfer from MADH to cytochrome c-551i does not involve a ternary complex but occurs via a ping-pong mechanism in which amicyanin uses the same interface for the reactions with MADH and cytochrome c-551i.	0.00224591
NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	5.34721e-21
NC_009523.1|WP_011957618.1|3634654_3635416_+|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl|CDD|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	5.10124e-11
NC_009523.1|WP_011957631.1|3649362_3652605_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl|CDD|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	1.2983e-39
NC_009523.1|WP_011957632.1|3653264_3654227_+|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.03341e-20

Protein sequences

>NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITARNLLLRLPELGTIKRTEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein
MPRLTVAGKTAEWSADKRLVNAIEDMGIHIGHRCGGKARCTTCRVTFISGEPDTMTAAEYEKLKERGLLGEYRLSCQILCTHDMEVEAVMTLENQEGWTDTGPRPADTVEPAAEWFPTSTFGA
>NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein
MRLPMAVFLILSGFYLLTMSGHTYSSDEETMLAVTRGLIERGDVAVVVEDGAPVSALRPGHDGRVYSPYGVLPSLLAIPLHLLGTLIAPSGLQADYASRFTTTMLNCLLTAATCAILVQWTQQLGATGKWALTLAFLYGLATFAWTYARTFFSEPLAALLILGATERAWSAFRVNSPGAQQKTLFVSGLLAGLLPATRIAAAIALPVIGLYVLWETLKTWSAKHEPTAKRVGHRRGAAFAEENPASRQSNVSGLIIWIAGLLPGFALAGWYNLSRFGTLLASGYGSEAFQFTTPLAEGLFGLLLSPGKSVFLYAPPLLLAFPGGFALWRRGERTTVLVIAALFLSHLLLYARWGQWPGGGVWGPRFLLPVVAPVTVLAAGLDILTPMQRLRLRRLIPALVLGGVGFISNLGGVLLNFDTYAVSTPFHTGVYTFSGSPLVGHWRLLIERWAHYSVPPPFCRLGDGLYASEATDNRALPRRTGSSGEVFCTVRRETRITLVLDDRRPDGAPSSQLRLRLNERDQGLLPSGQQRTYHWLVPPGHVHLEIIAQTWNPFETGFSDRNDPLGPAIVALRGQSDDGAALALVDTAVAPLPTLPRPRWAWYYDPPNQHLVDHWLWYLPRSELTVNQALAMGSLVVLTGTISLVIGIRLMLTAIRKRSVQ
>NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein
MLRGFRVFVLLALVTVVSACGRYEFRGVTLDPPKEAPDFTLTDFDGKPFRLSEQRGKIVILFFGFTNCPDMCPAALSDMAAARRKLGADAEKVQGVFVSLDPDRDTPERLKRYVTAFDPTFIGLRGSEAELSPVMQDYGVTSIRRELPDSALKYTIDHSTFIYVIDATGRWRLLFTHGMPVDDIVSDLRYLVRQGGA
>NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein
MWSHRTALLILALLAAGIAGTGVWYEHQRRNAERYLVFTVPPGSVARLASGEQLDILPQTIELSLRGKDTLVIRNEDVQPIQVGPFKIDPGQQFEQRYYNPGVYELICTLHQSQRLRIVVSRE
>NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA
MDDNLYRQRAAEHALRHVESGMTIGLGTGSTATFMLYGLAARLADGRLQRVTGVPTSEVTAALARELGIPLTTLDRQPHLDLALDGADEIDPQLRLIKGLGGAMLREKIVAASAARFVVMAAVSKCVERLGERSPLPVEVVAFGLPLCARRLKALGGAPALRRDRSGAPFVTDEGNLILDCNFGIIADPEALAASICAIPGVVAHGLFLGMASLAVIAGPDGIVELHAPSARQ
>NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit
MSKLSITIDGRTFTVETPPLPRTTGEMTVQVDGQTVNVLVHDTGSSELLDWLIVEGRPYELVIDPNLRWIRSRFGLHQVEVRDLESTIARPASGDGRIKAPIPGLITRVLVSPGEPVEVGQPLLVLEAMKMENEIRAPRSGRVTQVNVAAGQSVALGMVLAEVE
>NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein
MFRTLLVANRGEIAVRIIRTCRDMGIRTVALYDDTDLSSLHVRLADACVRLSSGAIYHDAPALVQIARDCGADAIHPGYGFLAEHDEFARACEEAGIAFIGPSSTALARVRDKIATLETVRAAGFAVPRHSPQAYRASEWEALRAAAGRLGYPLVLKSYSGGHGHGTRLVREPTHLESIAQHAHSAALTASGDDRLYLEEAFLPARYLEVQIVGDRYGNLVHLGERDGTIQHNHHKVVAESPAPYLTDAQREDLWRQALAIGRLLGCSNICTIEFVLDAQGHVYFTEVKTRIQVEHPVTEMRTGIDLVRTQIRIAAGEPPGFSQDDVALRGCAIQARINAEDPWNDYLPSPGRLRRFRFPGGPGVRVDTYAYGGCDVPVRYDPLLAKVIAWDDTRAGALQRLRRAVADFAISGVQTNLPLVQRILDTPEFTAGTYDSEFNRQPLPGAEVPDDHLRDLAVAAALAYLRRRSDTAGALPNRAGSGWHRDSRRLPQ
>NC_009523.1|WP_011957619.1|3635412_3636957_+|acyl-CoA-carboxylase-subunit-beta
MTSMQEYIEKLRQRKAIARGTAQDVEAQHKKGRLTARERIDLLFDPGTFEEIDTLVLPRYDVYPGGKRSRYGDGVVTGFGLINGRRAFVAAQDASVMGGSLGEMHANKIVKAMHMALKYGCPFIAINDSGGARIQEGVDSLGGYARIFDANCEASGVIPQLSLIMGPCAGGAVYSPALTDFIFMTENAYMFITGPEVVRAVMQEDVTQEQLGGGRVHAEESGVSHFLARDDQECLAMARELLSYLPLNNQDDPPYVRPVDDPERRCPELEEIVPVDPSKPYDVRKVISSILDDGRFFEVHALWAQNMVVGFGRLNGYVVGIVANQPMVLAGCIDIKASIKAAHFIRICDTYNVPIITLQDVPGFLPGTNQEYGGIIRNGARMIYAYSEAVVPKLMIILRKSYGGAYCVMSSKGLRGDLLYAWPNAELAVMGAAGAVNILYRNEVKSAPDPEAKRRELVEEYQERFNNPYVAAARGLIDDVIEPRDSRRVLIKALEVTLSKRERHVPRKHGISPS
>NC_009523.1|WP_011957618.1|3634654_3635416_+|4'-phosphopantetheinyl-transferase-superfamily-protein
MMHWLIQTLADHPALARAEVPEGMLSMGEQVRFQSLKRDKRRRDWLLGRWTAKRLTAQYIESITGRRPALSDIVITTDPDGAPRLHSRNGYAFINRLAISISHSHGYAFCALTDVPGRHPGADIEYIEQRNPAFVSDFFTDVEIERVHRAPPSAQPLLTTAIWSAKEAALKSIRRGLTVDTRCIICLPEEPVADGWSPVTVICSPELNATVRCGWWRQIGRFVLTLATADSEQATHAAVPIAEVQRIGDGVSP
>NC_009523.1|WP_041335499.1|3646337_3646670_+|hypothetical-protein
MKIPNADRAVIDAGKLVDYLLNPEHRRGGSKAALLISFGYSSAAWQQLEEALRRDHLSQDVFRVRQSAYGTRYEIRAHLSTPIGQPLMLRSVWQVDTGTDVPRFITAYPD
>NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein
MDFPLYEDVILLIDIPDEGLAAGDVGTVVERHDVPGLEPGYSVEFFDMLGNTVAVVTVAASALRRPTAADRPVVRQARVESPVGDGR
>NC_009523.1|WP_157041100.1|3648103_3648340_-|hypothetical-protein
MRLEPGRLRRRRARADHRVTRTLTMTLSAIGYRLSAIGYWLWYRASRPPEMRRDALSQSGGHGAGVFKENDRPVPGLP
>NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein
MTPFEQQLMERLEDYALRIIAVYNALPDYPASGHQVAQVLGKQLLRSGTSVGANYAEAIRSHSLADKAARQQICIKELEETAYWLRLLVKADLIAALRLESLLAETSELTAIFVASVCKLKNET
>NC_009523.1|WP_157041101.1|3648817_3649366_+|hypothetical-protein
MAITHPPPPSAIRHQTSAIRHRLSATSYRLSAISYQLSPIGHPPPDIGHPPPAISYQLSVIGYQLSAIAYRPSATRHRPSATGYQLPAIGYRLSAISYRLSAIRHQTSAIRHRLSATSYRLSAISYQLSPIGHPPPDIGHPPPAISYQLSVIGYQLSAIAYRLSPIGYQLSAIGYRLSAIGY
>NC_009523.1|WP_011957631.1|3649362_3652605_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MHIRRHPSSIALTLALPVALVFGALNPVAAQQPAPTATALPATPVPTVAPPTPTAAPPAPTVAPPVPTVALPTPEPTLTVPEAIDRILSGEKPVETLVTLFAWQPALLVVIMALVVAVSVVKPWRERLLRRVDRLIGGVRSDVEDEVQREEEKKRLEAERQARQFQEQLQVGITHYLDWLQAEYGFTQPLGIATEQVQLSLESVHVPLRVVERGAIEAHRRRMRGEERQGPERELPAGERRSRYVFELLSEPELLAARQTPPTRGVSGDDESPSPVTTTRLLLLGDAGSGKTTTLRYAALRLAEAYRRGDAALLASDAAGLHLHLQRAPLPIYVRLTLFAASIPADLRELPPQERERYAGAPADLFLTWLDREAARHCEIQEGALSSLIGKNDGNVLLLLDGLDEAGDEQRRAYLAQVIDNLARRYDKQRYVVASRTAGYGGLVYLPDFLERHLSPLDEQEAQALLRKWFDAVYARLHAIGRRRQDAAADQAAQLWEVIERNDRLRDMATNPLLLTVMALLQFNSVRLPDQRAKLYEKLIELLLDLWRRQNVASDTLVTSVAQLASEQRRLEALALAMQQQPQQVREVTLRQAQEWLSPLYVERLKIDREEADRRVHDLLRRLAVDSGIIQQREERYAFSHYTFQEYLAARALDSLDNRDGAPDSVAFLLERSADARWRETLLLAAGYWSNGQQIRKTERLLRGLLDRRDPENLLLAAAALADVGVVEDLADLRDEATARLRALAALTEDWRSAAHPDPALRNRAATMLDRLDADTERPGLDLTKPDYWANRIEPGTFSMGDTNSTYDREEPQFDYTIRRPYALARFPVTNRQYLLFVEALAGRGAPEAVAAANRLKDLMKQHGETPETYNGFRPYFWPGARYRAGEGNHPVVGVTWYAATAFAWWADAWLRALGVLKEGEEVRLPTEAEWERAAAYPPTLPGSDPRTGRREYPWGAELTTATSGSMIASIQANIDESKISGTSVVGIFPHGAAACGAEELAGNVWEWCSTPPLKYPFKGEVSAESLYTKNKRAGGTYVLRGGSWNSLRDGARCACRNVLNPGHVLVIIGFRLARLFSSC
>NC_009523.1|WP_011957632.1|3653264_3654227_+|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPYTNEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITALNLLLRLPELGTINRKEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957633.1|3655656_3658263_-|DEAD/DEAH-box-helicase
MTDFVELLRGARGYAGQIAHIERLPARAARFAEPSAPLPQPLAAALAARGITRLYTHQAAALDAARAGYHIGIVTATASGKTLCYQLPTIEAAITDHTACALFLFPTKALAADQLRALNSLLAALKAAGGPALTAATLDGDTPRPARDRLRTGAHVILSNPDLLHRTLLPDHARWQGILARLRYVVLDEAHVYRGVFGTHVALIMRRLRRLCAHYGSAPQFICCSATSANPQQHLAALVGDEVRVIDDDGAPQGARTFLFWNPPLTDRQRSMSWLSEQGQRRSTNVETASVLALLVRAGVKTLAFTRTRRSAELVLRYAREALENNAPPDNGRDRSIRSDITETRQPDTGQIAAYRAGYTVEERRRLEQAFAGGDLRGLVSTNALELGVDIGGVDAVVMGGFPGTIASAWQQAGRAGRSQGQSLAALVAQDDPLDQFYMRHPAEFFSRPHEYARVALDNPYILRDQVRCAAAELPLHDADDLWFGATFAKLRDWLLRRGELAALPDGRFAYAGDPRPAAGVNIRSADGDPIDLIDIDTDRRIEQIAATRAPFEVFPGAVYMHQGDTYVVVELTPRRALARRARVEYYTQTLDETDITIEQVRQQCNIGPATLFLGVVEVTRRVVGYRRKQHYTDEVLGEHDLTMPPQTFRTIAVWWTVPDPICRQVEQVCDGVIDALHAMEHAAIGLLPLFAQCDRGDIGGLSIDVHPDTGAATIFVYDGVPGGVGIAEVGYEQAAQWWEQTWRLLIDCPCSEGCPACIQSPKCGNGNQHLSKIGAATLAALLTGHTPPARSAFGGHGKGSALIEELKQQLARAKTEPPGVRRTAMLVALRYRIATGRTAISDDAGRSALAAIEAEANALYRGVADSR
>NC_009523.1|WP_041333787.1|3658509_3659259_+|hypothetical-protein
MNQACSRPCPFVQRHRHDLIRLRDHLAEGHRCADAWIAIAHLVHEPWQRLDCLERACAIDPDDQNLQIARLEHYVVLHPEDAHAAEELREAKARRALERYKPRVFRHQDASQPIGAILRALRAISDTDLEVVLEEQDRLRRLGRPLLLGDLLVRRGRVAPETLARALTLQSRLRAVNGAVPRTLGEYLIAQGHVTPDQLERALIEQIRLRASGAHEPLGEILLRHGAVDAAILQRAFQQHMHDAMTAFE
>NC_009523.1|WP_011957635.1|3659589_3660252_+|pyrimidine-5'-nucleotidase
MTLAAILFDLDSTLYPRSAGVQRALDERMNAYVQRVTGCTLEEAPILRDSWFRRYGTTLAGLQHEYHIDVEDYLRVIHDIRLETFLKRDPELDALLERLDLQRAIFTNSPAEHAARVLRTLGVARHFPLIFDIRFFEFQPKPKLTAYTRALDALGVAAGETLLIEDTPQNLPPARELGMRTILIDEQGAHRSDGIADHVAPDIRAALRIVLNGGIPGVRA

Crispr_ID: NC_009523_65

• CRISPR_ID: NC_009523_65
• CRISPR_location: 3647299-3647391
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas3

Consensus repeat of NC_009523_65

Consensus_repeat	Method
AGACGAAGCCCGCCTGCGCGGGCTA	CRISPRCasFinder

spacers of NC_009523_65

>65.1|3647324|43|NC_009523|CRISPRCasFinder
GAGCGGAATATTTCTTCAAAGACCATAAGCCCTCGGCTAGCCA

CRISPR arrays and Neighbor proteins around NC_009523_65

CRISPR arrays

The CRISPR arrays of NC_009523_65

>merge|NC_009523|65|3647299-3647391|CRISPRCasFinder
AGACGAAGCCCGCCTGCGCGGGCTAGAGCGGAATATTTCTTCAAAGACCATAAGCCCTCGGCTAGCCAAGGCGAAGCCCGCCTGCGCGGGCTA

>NC_009523|65|62|3647299-3647391|CRISPRCasFinder
AGACGAAGCCCGCCTGCGCGGGCTA	GAGCGGAATATTTCTTCAAAGACCATAAGCCCTCGGCTAGCCA
AGGCGAAGCCCGCCTGCGCGGGCTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957637.1|3661589_3662846_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|366721
NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|223706
NC_009523.1|WP_157041100.1|3648103_3648340_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041101.1|3648817_3649366_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957635.1|3659589_3660252_+|pyrimidine-5'-nucleotidase	unknown	unknown	gnl|CDD|319791
NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein	unknown	unknown	gnl|CDD|224720
NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein	unknown	unknown	gnl|CDD|236307
NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl|CDD|234816
NC_009523.1|WP_041333787.1|3658509_3659259_+|hypothetical-protein	unknown	unknown	gnl|CDD|237974
NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein	unknown	unknown	gnl|CDD|274132
NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein	unknown	unknown	gnl|CDD|379816
NC_009523.1|WP_011957633.1|3655656_3658263_-|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	gnl|CDD|274800
NC_009523.1|WP_041335499.1|3646337_3646670_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957632.1|3653264_3654227_+|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein	unknown	unknown	gnl|CDD|239266
NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein	unknown	unknown	gnl|CDD|259988
NC_009523.1|WP_011957636.1|3660353_3661310_-|prohibitin-family-protein	unknown	unknown	gnl|CDD|259799
NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011957631.1|3649362_3652605_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl|CDD|335469
NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	unknown	unknown	gnl|CDD|133459

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011957633.1|3655656_3658263_-|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	1.8e-16	54.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957637.1|3661589_3662846_-|FAD-dependent-oxidoreductase	gnl|CDD|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	3.79226e-57
NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein	gnl|CDD|223706	COG0633, Fdx, Ferredoxin [Energy production and conversion].	4.41428e-15
NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	gnl|CDD|133459	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine.	1.65958e-27
NC_009523.1|WP_011957635.1|3659589_3660252_+|pyrimidine-5'-nucleotidase	gnl|CDD|319791	cd02604, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to Saccharomyces cerevisiae Phm8p and Sdt1p. This family includes Saccharomyces cerevisiae Phm8p (phosphate metabolism protein 8) and Sdt1p (Suppressor of disruption of TFIIS). Phm8p participates in the ribose salvage pathway, it catalyzes the dephosphorylation of nucleotide monophosphates to nucleosides, its preferred substrates are nucleotide monophosphates AMP, GMP, CMP, and UMP. Phm8p is also a lysophosphatidic acid phosphatase, dephosphorylating lysophosphatidic acids (LPAs) to monoacylglycerol in response to phosphate starvation. Sdt1p is a pyrimidine and pyridine-specific 5'-nucleotidase; it is an NMN/NaMN 5'-nucleotidases involved in the production of nicotinamide riboside and nicotinic acid riboside, and is a pyrimidine 5'-nucleotidase with high specificity for UMP and CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.09439e-52
NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	0.000180997
NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein	gnl|CDD|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	2.08516e-176
NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA	gnl|CDD|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	3.57145e-109
NC_009523.1|WP_041333787.1|3658509_3659259_+|hypothetical-protein	gnl|CDD|237974	PRK15489, nfrB, glycosyl transferase family protein.	0.000101013
NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein	gnl|CDD|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	2.4118e-21
NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein	gnl|CDD|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	2.06249e-17
NC_009523.1|WP_011957633.1|3655656_3658263_-|DEAD/DEAH-box-helicase	gnl|CDD|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	0
NC_009523.1|WP_011957632.1|3653264_3654227_+|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.03341e-20
NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein	gnl|CDD|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	3.19876e-59
NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein	gnl|CDD|259988	cd13921, Amicyanin, Amicyanin is a type I blue copper protein that plays an essential role in electron transfer. In Paracoccus denitrificans bacteria, amicyanin acts as an intermediary of a three-member redox complex along with methylamine dehydrogenase (MADH) and cytochrome c-551i. The electron is transferred from the active site of MADH via the amicyanin copper ion to the cytochrome heme iron. The electron transfer from MADH to cytochrome c-551i does not involve a ternary complex but occurs via a ping-pong mechanism in which amicyanin uses the same interface for the reactions with MADH and cytochrome c-551i.	0.00224591
NC_009523.1|WP_011957636.1|3660353_3661310_-|prohibitin-family-protein	gnl|CDD|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	1.80875e-76
NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	5.34721e-21
NC_009523.1|WP_011957631.1|3649362_3652605_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl|CDD|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	1.2983e-39

Protein sequences

>NC_009523.1|WP_011957629.1|3646683_3646947_+|DUF4926-domain-containing-protein
MDFPLYEDVILLIDIPDEGLAAGDVGTVVERHDVPGLEPGYSVEFFDMLGNTVAVVTVAASALRRPTAADRPVVRQARVESPVGDGR
>NC_009523.1|WP_041335499.1|3646337_3646670_+|hypothetical-protein
MKIPNADRAVIDAGKLVDYLLNPEHRRGGSKAALLISFGYSSAAWQQLEEALRRDHLSQDVFRVRQSAYGTRYEIRAHLSTPIGQPLMLRSVWQVDTGTDVPRFITAYPD
>NC_009523.1|WP_011957627.1|3644399_3645362_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITARNLLLRLPELGTIKRTEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957626.1|3643616_3643988_+|(2Fe-2S)-binding-protein
MPRLTVAGKTAEWSADKRLVNAIEDMGIHIGHRCGGKARCTTCRVTFISGEPDTMTAAEYEKLKERGLLGEYRLSCQILCTHDMEVEAVMTLENQEGWTDTGPRPADTVEPAAEWFPTSTFGA
>NC_009523.1|WP_011957625.1|3641589_3643575_+|hypothetical-protein
MRLPMAVFLILSGFYLLTMSGHTYSSDEETMLAVTRGLIERGDVAVVVEDGAPVSALRPGHDGRVYSPYGVLPSLLAIPLHLLGTLIAPSGLQADYASRFTTTMLNCLLTAATCAILVQWTQQLGATGKWALTLAFLYGLATFAWTYARTFFSEPLAALLILGATERAWSAFRVNSPGAQQKTLFVSGLLAGLLPATRIAAAIALPVIGLYVLWETLKTWSAKHEPTAKRVGHRRGAAFAEENPASRQSNVSGLIIWIAGLLPGFALAGWYNLSRFGTLLASGYGSEAFQFTTPLAEGLFGLLLSPGKSVFLYAPPLLLAFPGGFALWRRGERTTVLVIAALFLSHLLLYARWGQWPGGGVWGPRFLLPVVAPVTVLAAGLDILTPMQRLRLRRLIPALVLGGVGFISNLGGVLLNFDTYAVSTPFHTGVYTFSGSPLVGHWRLLIERWAHYSVPPPFCRLGDGLYASEATDNRALPRRTGSSGEVFCTVRRETRITLVLDDRRPDGAPSSQLRLRLNERDQGLLPSGQQRTYHWLVPPGHVHLEIIAQTWNPFETGFSDRNDPLGPAIVALRGQSDDGAALALVDTAVAPLPTLPRPRWAWYYDPPNQHLVDHWLWYLPRSELTVNQALAMGSLVVLTGTISLVIGIRLMLTAIRKRSVQ
>NC_009523.1|WP_011957624.1|3640720_3641314_-|SCO-family-protein
MLRGFRVFVLLALVTVVSACGRYEFRGVTLDPPKEAPDFTLTDFDGKPFRLSEQRGKIVILFFGFTNCPDMCPAALSDMAAARRKLGADAEKVQGVFVSLDPDRDTPERLKRYVTAFDPTFIGLRGSEAELSPVMQDYGVTSIRRELPDSALKYTIDHSTFIYVIDATGRWRLLFTHGMPVDDIVSDLRYLVRQGGA
>NC_009523.1|WP_011957623.1|3640345_3640717_-|hypothetical-protein
MWSHRTALLILALLAAGIAGTGVWYEHQRRNAERYLVFTVPPGSVARLASGEQLDILPQTIELSLRGKDTLVIRNEDVQPIQVGPFKIDPGQQFEQRYYNPGVYELICTLHQSQRLRIVVSRE
>NC_009523.1|WP_011957622.1|3639630_3640332_-|ribose-5-phosphate-isomerase-RpiA
MDDNLYRQRAAEHALRHVESGMTIGLGTGSTATFMLYGLAARLADGRLQRVTGVPTSEVTAALARELGIPLTTLDRQPHLDLALDGADEIDPQLRLIKGLGGAMLREKIVAASAARFVVMAAVSKCVERLGERSPLPVEVVAFGLPLCARRLKALGGAPALRRDRSGAPFVTDEGNLILDCNFGIIADPEALAASICAIPGVVAHGLFLGMASLAVIAGPDGIVELHAPSARQ
>NC_009523.1|WP_011957621.1|3638461_3638956_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit
MSKLSITIDGRTFTVETPPLPRTTGEMTVQVDGQTVNVLVHDTGSSELLDWLIVEGRPYELVIDPNLRWIRSRFGLHQVEVRDLESTIARPASGDGRIKAPIPGLITRVLVSPGEPVEVGQPLLVLEAMKMENEIRAPRSGRVTQVNVAAGQSVALGMVLAEVE
>NC_009523.1|WP_011957620.1|3636968_3638450_+|ATP-grasp-domain-containing-protein
MFRTLLVANRGEIAVRIIRTCRDMGIRTVALYDDTDLSSLHVRLADACVRLSSGAIYHDAPALVQIARDCGADAIHPGYGFLAEHDEFARACEEAGIAFIGPSSTALARVRDKIATLETVRAAGFAVPRHSPQAYRASEWEALRAAAGRLGYPLVLKSYSGGHGHGTRLVREPTHLESIAQHAHSAALTASGDDRLYLEEAFLPARYLEVQIVGDRYGNLVHLGERDGTIQHNHHKVVAESPAPYLTDAQREDLWRQALAIGRLLGCSNICTIEFVLDAQGHVYFTEVKTRIQVEHPVTEMRTGIDLVRTQIRIAAGEPPGFSQDDVALRGCAIQARINAEDPWNDYLPSPGRLRRFRFPGGPGVRVDTYAYGGCDVPVRYDPLLAKVIAWDDTRAGALQRLRRAVADFAISGVQTNLPLVQRILDTPEFTAGTYDSEFNRQPLPGAEVPDDHLRDLAVAAALAYLRRRSDTAGALPNRAGSGWHRDSRRLPQ
>NC_009523.1|WP_157041100.1|3648103_3648340_-|hypothetical-protein
MRLEPGRLRRRRARADHRVTRTLTMTLSAIGYRLSAIGYWLWYRASRPPEMRRDALSQSGGHGAGVFKENDRPVPGLP
>NC_009523.1|WP_011957630.1|3648424_3648799_-|four-helix-bundle-protein
MTPFEQQLMERLEDYALRIIAVYNALPDYPASGHQVAQVLGKQLLRSGTSVGANYAEAIRSHSLADKAARQQICIKELEETAYWLRLLVKADLIAALRLESLLAETSELTAIFVASVCKLKNET
>NC_009523.1|WP_157041101.1|3648817_3649366_+|hypothetical-protein
MAITHPPPPSAIRHQTSAIRHRLSATSYRLSAISYQLSPIGHPPPDIGHPPPAISYQLSVIGYQLSAIAYRPSATRHRPSATGYQLPAIGYRLSAISYRLSAIRHQTSAIRHRLSATSYRLSAISYQLSPIGHPPPDIGHPPPAISYQLSVIGYQLSAIAYRLSPIGYQLSAIGYRLSAIGY
>NC_009523.1|WP_011957631.1|3649362_3652605_-|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MHIRRHPSSIALTLALPVALVFGALNPVAAQQPAPTATALPATPVPTVAPPTPTAAPPAPTVAPPVPTVALPTPEPTLTVPEAIDRILSGEKPVETLVTLFAWQPALLVVIMALVVAVSVVKPWRERLLRRVDRLIGGVRSDVEDEVQREEEKKRLEAERQARQFQEQLQVGITHYLDWLQAEYGFTQPLGIATEQVQLSLESVHVPLRVVERGAIEAHRRRMRGEERQGPERELPAGERRSRYVFELLSEPELLAARQTPPTRGVSGDDESPSPVTTTRLLLLGDAGSGKTTTLRYAALRLAEAYRRGDAALLASDAAGLHLHLQRAPLPIYVRLTLFAASIPADLRELPPQERERYAGAPADLFLTWLDREAARHCEIQEGALSSLIGKNDGNVLLLLDGLDEAGDEQRRAYLAQVIDNLARRYDKQRYVVASRTAGYGGLVYLPDFLERHLSPLDEQEAQALLRKWFDAVYARLHAIGRRRQDAAADQAAQLWEVIERNDRLRDMATNPLLLTVMALLQFNSVRLPDQRAKLYEKLIELLLDLWRRQNVASDTLVTSVAQLASEQRRLEALALAMQQQPQQVREVTLRQAQEWLSPLYVERLKIDREEADRRVHDLLRRLAVDSGIIQQREERYAFSHYTFQEYLAARALDSLDNRDGAPDSVAFLLERSADARWRETLLLAAGYWSNGQQIRKTERLLRGLLDRRDPENLLLAAAALADVGVVEDLADLRDEATARLRALAALTEDWRSAAHPDPALRNRAATMLDRLDADTERPGLDLTKPDYWANRIEPGTFSMGDTNSTYDREEPQFDYTIRRPYALARFPVTNRQYLLFVEALAGRGAPEAVAAANRLKDLMKQHGETPETYNGFRPYFWPGARYRAGEGNHPVVGVTWYAATAFAWWADAWLRALGVLKEGEEVRLPTEAEWERAAAYPPTLPGSDPRTGRREYPWGAELTTATSGSMIASIQANIDESKISGTSVVGIFPHGAAACGAEELAGNVWEWCSTPPLKYPFKGEVSAESLYTKNKRAGGTYVLRGGSWNSLRDGARCACRNVLNPGHVLVIIGFRLARLFSSC
>NC_009523.1|WP_011957632.1|3653264_3654227_+|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPYTNEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITALNLLLRLPELGTINRKEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957633.1|3655656_3658263_-|DEAD/DEAH-box-helicase
MTDFVELLRGARGYAGQIAHIERLPARAARFAEPSAPLPQPLAAALAARGITRLYTHQAAALDAARAGYHIGIVTATASGKTLCYQLPTIEAAITDHTACALFLFPTKALAADQLRALNSLLAALKAAGGPALTAATLDGDTPRPARDRLRTGAHVILSNPDLLHRTLLPDHARWQGILARLRYVVLDEAHVYRGVFGTHVALIMRRLRRLCAHYGSAPQFICCSATSANPQQHLAALVGDEVRVIDDDGAPQGARTFLFWNPPLTDRQRSMSWLSEQGQRRSTNVETASVLALLVRAGVKTLAFTRTRRSAELVLRYAREALENNAPPDNGRDRSIRSDITETRQPDTGQIAAYRAGYTVEERRRLEQAFAGGDLRGLVSTNALELGVDIGGVDAVVMGGFPGTIASAWQQAGRAGRSQGQSLAALVAQDDPLDQFYMRHPAEFFSRPHEYARVALDNPYILRDQVRCAAAELPLHDADDLWFGATFAKLRDWLLRRGELAALPDGRFAYAGDPRPAAGVNIRSADGDPIDLIDIDTDRRIEQIAATRAPFEVFPGAVYMHQGDTYVVVELTPRRALARRARVEYYTQTLDETDITIEQVRQQCNIGPATLFLGVVEVTRRVVGYRRKQHYTDEVLGEHDLTMPPQTFRTIAVWWTVPDPICRQVEQVCDGVIDALHAMEHAAIGLLPLFAQCDRGDIGGLSIDVHPDTGAATIFVYDGVPGGVGIAEVGYEQAAQWWEQTWRLLIDCPCSEGCPACIQSPKCGNGNQHLSKIGAATLAALLTGHTPPARSAFGGHGKGSALIEELKQQLARAKTEPPGVRRTAMLVALRYRIATGRTAISDDAGRSALAAIEAEANALYRGVADSR
>NC_009523.1|WP_041333787.1|3658509_3659259_+|hypothetical-protein
MNQACSRPCPFVQRHRHDLIRLRDHLAEGHRCADAWIAIAHLVHEPWQRLDCLERACAIDPDDQNLQIARLEHYVVLHPEDAHAAEELREAKARRALERYKPRVFRHQDASQPIGAILRALRAISDTDLEVVLEEQDRLRRLGRPLLLGDLLVRRGRVAPETLARALTLQSRLRAVNGAVPRTLGEYLIAQGHVTPDQLERALIEQIRLRASGAHEPLGEILLRHGAVDAAILQRAFQQHMHDAMTAFE
>NC_009523.1|WP_011957635.1|3659589_3660252_+|pyrimidine-5'-nucleotidase
MTLAAILFDLDSTLYPRSAGVQRALDERMNAYVQRVTGCTLEEAPILRDSWFRRYGTTLAGLQHEYHIDVEDYLRVIHDIRLETFLKRDPELDALLERLDLQRAIFTNSPAEHAARVLRTLGVARHFPLIFDIRFFEFQPKPKLTAYTRALDALGVAAGETLLIEDTPQNLPPARELGMRTILIDEQGAHRSDGIADHVAPDIRAALRIVLNGGIPGVRA
>NC_009523.1|WP_011957636.1|3660353_3661310_-|prohibitin-family-protein
MNQGQEGRAFQNPDARGRSVSVLIVLSLIVVVAIFLGSSSVTTIEAGTRGVLKTFGEITGVLEEGLHFRMPFITSVTIVEVRTQRYESNSSAASRDLQTVTTQVVINYRPDAGQVDRLVREIGVDYERRVVDPAIQESIKAATARFTAEELITRRPEVSELIQRGLSERLTPRGVIVESVSITDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQQQVARAEAEAKARLEIARAEAEALRLQREVISAELLQLRFIERWDGVMPRFVGGENSLMPMLSIPSSEVLGASTPTPPRTPAEDQAPAPANEQPATSP
>NC_009523.1|WP_011957637.1|3661589_3662846_-|FAD-dependent-oxidoreductase
MHVIVLGAGASGLAAARRLHDAGVTVQVLEARQRIGGRIWTDHTFAPFPVEHGAEFIHGEHAVTHALVTAAGLEAIPVDRYGRLRWSDGGSARTIDALPPHRRDLIGALFRTFDRLRDVPHDAPDRSLAHYLRECGFDEEALTVADVLLAQTCCASVETLSCADLSRELRVDHAGRREYRVREGYAALLEWYARGLDIRTGTVVRLVRHTSGGVIIETDAGIFHGDRCIVTIPVAVLQRGLPQFDPPLSARKRRAINALRIEPATKLFYRFDEPMWDADLTFMAHKGLSARWWTAAHTTRNAAVIVAYATAARARALDALDDDEALAVGLEELQTLLGRRDLTQRQRAARRVAWGADPFAYGGYAHVPPGAADARVVLAAPEGATLFFAGEATAYDSNPQTVHGAIESGWRAADEVVR

Crispr_ID: NC_009523_66

• CRISPR_ID: NC_009523_66
• CRISPR_location: 3678127-3678217
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_66

Consensus_repeat	Method
GCAAAGCCCGCCTGCGCGGGCTA	CRISPRCasFinder

spacers of NC_009523_66

>66.1|3678150|45|NC_009523|CRISPRCasFinder
TACCGGACTTAATTCCTAAGGATCATAAGCCCTCGGCTATGCGCT

CRISPR arrays and Neighbor proteins around NC_009523_66

CRISPR arrays

The CRISPR arrays of NC_009523_66

>merge|NC_009523|66|3678127-3678217|CRISPRCasFinder
GCAAAGCCCGCCTGCGCGGGCTATACCGGACTTAATTCCTAAGGATCATAAGCCCTCGGCTATGCGCTGCGAAGCCCGCCTGCGCGGGCTA

>NC_009523|66|63|3678127-3678217|CRISPRCasFinder
GCAAAGCCCGCCTGCGCGGGCTA	TACCGGACTTAATTCCTAAGGATCATAAGCCCTCGGCTATGCGCT
GCGAAGCCCGCCTGCGCGGGCTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957652.1|3674303_3675368_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293817
NC_009523.1|WP_083763375.1|3680395_3682885_-|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_157041102.1|3668302_3668560_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957654.1|3678301_3680392_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|350194
NC_009523.1|WP_011957655.1|3683817_3686874_-|restriction-endonuclease	unknown	unknown	gnl|CDD|368155
NC_009523.1|WP_011957651.1|3671533_3674314_+|N-6-DNA-methylase	unknown	unknown	gnl|CDD|280533
NC_009523.1|WP_011957656.1|3687408_3688872_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl|CDD|234572
NC_009523.1|WP_011957649.1|3670181_3670910_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_009523.1|WP_011957643.1|3667052_3667721_+|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl|CDD|223477
NC_009523.1|WP_157041103.1|3682881_3683295_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957648.1|3669435_3670170_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_009523.1|WP_011957644.1|3667751_3668183_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957658.1|3690306_3691206_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|224137
NC_009523.1|WP_011957647.1|3668906_3669254_+|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009523.1|WP_157041332.1|3688871_3690284_-|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl|CDD|274396
NC_009523.1|WP_011957661.1|3692719_3695107_-|pyruvate-dehydrogenase-E1	unknown	unknown	gnl|CDD|225329
NC_009523.1|WP_083763305.1|3668510_3668879_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NC_009523.1|WP_011957660.1|3692261_3692624_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957659.1|3691344_3692130_-|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl|CDD|237285
NC_009523.1|WP_011957653.1|3675658_3676621_+|IS110-family-transposase	unknown	unknown	gnl|CDD|376564

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957652.1|3674303_3675368_+|MBL-fold-metallo-hydrolase	gnl|CDD|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	2.04406e-31
NC_009523.1|WP_083763375.1|3680395_3682885_-|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.51767e-14
NC_009523.1|WP_011957661.1|3692719_3695107_-|pyruvate-dehydrogenase-E1	gnl|CDD|225329	COG2609, AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion].	7.24365e-176
NC_009523.1|WP_011957654.1|3678301_3680392_-|DEAD/DEAH-box-helicase	gnl|CDD|350194	cd18807, SF1_C_UvrD, C-terminal helicase domain of UvrD family helicases. UvrD is a highly conserved helicase involved in mismatch repair, nucleotide excision repair, and recombinational repair. It plays a critical role in maintaining genomic stability and facilitating DNA lesion repair in many prokaryotic species including Helicobacter pylori and Escherichia coli. This family also includes ATP-dependent helicase/nuclease AddA and helicase/nuclease RecBCD subunit RecB, among others. UvrD family helicases are DEAD-like helicases belonging to superfamily (SF)1, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF2 helicases, SF1 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	9.46168e-15
NC_009523.1|WP_011957655.1|3683817_3686874_-|restriction-endonuclease	gnl|CDD|368155	pfam04851, ResIII, Type III restriction enzyme, res subunit.	0.000311735
NC_009523.1|WP_011957651.1|3671533_3674314_+|N-6-DNA-methylase	gnl|CDD|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	3.03657e-14
NC_009523.1|WP_011957656.1|3687408_3688872_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl|CDD|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NC_009523.1|WP_011957649.1|3670181_3670910_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	6.53123e-28
NC_009523.1|WP_011957643.1|3667052_3667721_+|alpha/beta-hydrolase-fold-domain-containing-protein	gnl|CDD|223477	COG0400, COG0400, Predicted esterase [General function prediction only].	1.16733e-42
NC_009523.1|WP_011957648.1|3669435_3670170_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	3.94468e-28
NC_009523.1|WP_011957658.1|3690306_3691206_-|glycosyltransferase-family-2-protein	gnl|CDD|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	7.83664e-59
NC_009523.1|WP_011957647.1|3668906_3669254_+|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	7.13239e-11
NC_009523.1|WP_157041332.1|3688871_3690284_-|undecaprenyl-phosphate-glucose-phosphotransferase	gnl|CDD|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	4.89331e-161
NC_009523.1|WP_083763305.1|3668510_3668879_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	7.34695e-13
NC_009523.1|WP_011957659.1|3691344_3692130_-|tryptophan-synthase-subunit-alpha	gnl|CDD|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	6.24028e-130
NC_009523.1|WP_011957653.1|3675658_3676621_+|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	7.07946e-20

Protein sequences

>NC_009523.1|WP_011957653.1|3675658_3676621_+|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPLETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIPMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTIKRTEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957652.1|3674303_3675368_+|MBL-fold-metallo-hydrolase
MTFEHSVKVAFLDVGQGDSIVVTVPNTGEAVIIDCPEADTVIEYLRNERIHSIRALIITHLHLDHFKDAVGFLENCSSQLNIKCEHLIFNWPSNLQKLAPDADGHSEIYRNPKRRNQARLTAYQELVAWTKRNTRSCFPLLRPNNGYRLRIKGTIKDAIRILQPSHGCMGSLMQSGLNNTSAVLRIEGPGSSALLTADIEPDGWNQLRSSHSDLQSDVLKFPHHGAWKNADPADILTAVDPSIVIISVGTDGIQYSHPNVHVFAAIRNRSNTRLLCTQATSRCVDNPDSHASQIDAILQAHSRGSGHIRTHRGCPCAGTIVIELGDQVTVLQPDISVHRNQIILRFLTSHRCRI
>NC_009523.1|WP_011957651.1|3671533_3674314_+|N-6-DNA-methylase
MLSQAAPSHERLGFAPLPDNARQAVYDSLTACGFAHEAILESYNFTGRGGDFTLNMLAFADRVRRNPAEYAGCTVYNATNGLPDREIVSVLAQTAAPFHIIHREDRFSFWATTLEQNTINPIDLGAEISYAQLSQVLQEYKIDLAPDQIVSVKQGRSQFAHPHLRDLEPLQLALWAIDVTRDTLVDTFGRAVTQLRADMNDRPDPEITGLAIRMLGAMILADTGALDASMRQRRSDLSFDQLLLGAARKYPTYFGDMHLFLERDYRRIERAYDILRRIYYSGFVPDMLSALYTKAYGKEKRKKLGFYDTPLYLTRRILHNIPVEFLPPKQRIVVDMTCGWGSFLIAGVERLSQLSDMRDQSLRDHIIGNDIDIFTAQLAGLGLLLATSEDSWHIDHEDARQWSWIDMHTPGIIVGNPPFRGRRDQPESLEDLMPTKGKRTRVEAANAYLDLAIRNVRTGGYIAMIMPQSFLVAEAGPDVRRNLLESCDVTEIWELPGRMFPDAKVQPIVLFARKESGKRKTVFPIRTRNVQKSTIEAFKKSGIFTASNIASGFSIPEDGDIKTSAKETYRIDAPVILSDVDWHTLRQRCRNLAEYATIFPGTIRGKKKENKRWLDDPEQREVLWLTNALKTVPGLWHINYRAAISKTYPRDFEEPRLEYQDILDSEKIIMVAKPNPSWGRRAKAVVERQGYHVSHSFWVVWPDEKTNPYLSKEALTAIMNWHVSNAWIAEYLNYPWIERRIIETIPIPRDLSPDDCLALTDAVRAIERAAYAHQRLPEDSVQSIDTILRRAYDLDDATYARLRAISEWDEHPHITLDPQPDRSVADYIISGIVEEVQAEKGVVSLWISGFDDAQTVPIDPLMPGWMLRPETPFRAKIPFVHKRKRSLEGVVWNSFAPQQHTYQNEDELVQELARIFAFAENKTDDV
>NC_009523.1|WP_011957649.1|3670181_3670910_+|Uma2-family-endonuclease
MSVETATSAGAAVAAPPDERPPLHSGDRLTRAEFARRYALHPEIKKAELIDGVVYVASPTRHRQHGKPHSLLVGWIIAYAAATPGVDFSDNATVLLDLENEHQPDALLRLEPIHGGRSRVTRDDYIEGPPDLIVEVAASSAAYDLHDKKRVYARSGVQEYLVAQAYERRVDWWELREGVFTPLPLEADGTLRSRVFPGLWLDPAALWAGDAAALLATLQRGLADPAHAAFVERLRRAEQGAA
>NC_009523.1|WP_011957648.1|3669435_3670170_+|Uma2-family-endonuclease
MSVETATSAGAAVATPPDERPPLHSGDRLTRAEFARRYALHPEIQKAELIDGVVYVASPTRHRQHGRLHLILVAWLGVYSAATPGVDGSNNATVLLDLENEHQPDALLRLEPIHGGRSRVTRDDYIEGPPDLIVEVAASSAAYDLHDKKRVYARSGVQEYLVAQAYERRVDWWELREGVFTPLPLEADGTLRSRVFPGLWLDPAALWAGDAAALLATLQRGLANPAHAAFVERLRATSGATPAS
>NC_009523.1|WP_011957647.1|3668906_3669254_+|nucleotidyltransferase-domain-containing-protein
MTASVSLDLPLRYLDKVRAILRQYVPDYDVWAYGSRVRGGAFAASDLDLVVRNPRHPLQPCDRIFDLRSAFLESDLPIRVDVMDWARIPPAFRQEIERGYVVVQAATEPTMHTTG
>NC_009523.1|WP_083763305.1|3668510_3668879_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MPVTTPGENSMAFQRGDVVLVPFPFSDLSTTKVRPAVVVSSSLYHATEPDLILAAITSRVAASSGPLDCVLHDWQVAGLRYPSAVKPVLFTLDPTRVIYHVGALTPVDLAEVAQRLRRALEL
>NC_009523.1|WP_157041102.1|3668302_3668560_+|hypothetical-protein
MEKQIRLSVQHADRLSRLARAKALSEDQIIEKALDILFSLTDLLDQHVEREGWSFLSEGTLQRVWDNEEDARYDSWRELYGLSAR
>NC_009523.1|WP_011957644.1|3667751_3668183_+|hypothetical-protein
MYQFLLLIHVTCFALWMGAVAASLLVVRTLEPRLTGVTGDAMQDASLLRAYIRQEVKFVDVVFAGVLVSGIMLAQLYTGWTPWVLTKIGLFIAQFVATMAYIQVFIRPLTYPCPPHHYRRWYGLFAVSLSFFAMTLLVVFFGR
>NC_009523.1|WP_011957643.1|3667052_3667721_+|alpha/beta-hydrolase-fold-domain-containing-protein
MESRNLPLYHLVRPAAGDDPHPPLLVLFHGYGSNEEDLFGLTPYIDPQFLVLSTRAPLTLMPGMYAWFEIGFTPDGRIAVDDVQARQAAQITAQFVEQATRAYGADPSRVIVAGFSQGGTMAALTALTRPDLVAGAAVLSGIVPSSIIDELPDREALVGKPFLVVHGTNDQVVSIAHGRASRNFLSQLGVALTYREYPMAHEINLDALLDLTEWLRTLKVEG
>NC_009523.1|WP_011957654.1|3678301_3680392_-|DEAD/DEAH-box-helicase
MHFRIADTFTASLARLTSEEQKAVKVTVFDLQADPSSPGMQFHKIEKSRDKNFWSVRVNRDLRIIVHRSHDSLLLCYVGHHDQAYAWAERRRLEVHPRTGAAQFVEIRERVEDSVVTRRPAGGERDVPVPSPQTARLPLAHCADEELLSYGVPVEWLSDVKQADEDGLLALAEHLPAEAAEAVLELATGGKPTPRPVLPAADAFVHPDAQRRFRLMTDVEDLKRALEYPWDRWTIFLHPAQREWVEKDFNGPARVAGSAGTGKTVVALHRAASLARRHPDARVLLTTFSDALANALQSLFRRLIAGEPRLAGRVDIRALNAVGERLYTLHFGAPRLVARETVERYLVEAAQGSPAARFPAAFLLDEWTEIVDAWQLASWEDYRTVPRLGRKTRLPEARRAELWAVFEAVNRRLEQEGWLTRARLFGRLAEKIQTLAQPPYDFVVVDEAQDMSIPQLRFLAAFDAKATNRLFFAGDLGQRIFQQPFSWASLGVDVRGRSRTLRVNYRTSHQIRAQADRLLAPQLTDVDGNVEDRRGTVSVFNGPPPVIRVFDNEEQEAAGVADWLKEQLQEGVAPNEIGIIVRSDAQVARARRAAELAGLSSAVLDERIEMQHGHASICTMPLAKGLEFRCVAVMACDDEVVPLNSRIENITDDSDLEEVYNTERHLLYVACTRARDALHVSAVTPASEFLGDLIRP
>NC_009523.1|WP_083763375.1|3680395_3682885_-|site-specific-DNA-methyltransferase
MILGDSLQVMASLAEREGLRGKVQMIYIDPPYGIKFNSNFQWSTTSRDVKDGRPEHITREPEQVKAFRDTWRDGIHSYLTCLRDRLTVARDLLTESGSIFVQIGDENVHRVRCLMDEVFGPDNFVRQIAFAKTGSMVSDELGRTSDYLLWYAKDKEYIKYRQLYSKKLPDAFYSNVELADSSVRKITHAEMVDPLLLPAGARVFRLVSLESAGPSGEDTPLEFEGEKFRPSKNGHWKLTYPDSMEALKKTGRMVKDGNKLRWKYYIDDYPLKVLSEVWSDTASFNPDQRYVVETRTKVVERCILMTTDPGDLVLDPTCGSGTTAYVAEQWGRRWITIDTSRVALALARARLMGARYPYYLLADSPEGRRKEAELSGRSYVEKPTYGDIRQGFVYERVPHITLKSIANNAEIDVIYETWQPQVLEALARLNAALRGHTKPFRVTNGGREGKEVRFDAPEGATFTMPSGEVVKAYELVEWEVPRQAPADWPETARQPLADFWAARIARQREIDASIARNADIEYLYDRPYIDNRKVRVAGPFTVESLSPHRTLFVDENDELIDPLRVRELQADYQPPPGFEQMVLENLKAAGVQQVHREDRISFTSIVPWPGELVCAEGRYLEGATEKRAAIFIGPEFGTVSRPDLVAAAREAADASFDVLIACAFSFEAHASEFNRLGRIPVLRARMNADLHMGGDLKPTGKGNLFVIFGEPDIKLLHEPDGRIRVQIRGVDVFDPSTGEIRSDSTDGIACWFIDTDYNEESFFVRHAYFLGQNDPYKALKTTLRAEINEEAWATLNSDTSRPFAKPASGRIAVKVINHLGDEVMKVFRV
>NC_009523.1|WP_157041103.1|3682881_3683295_-|hypothetical-protein
MTRKKSASTNAGKSIEALTHKHDKRKNIPTAEYQAVMKPEEQAPRLLRYPRNTDLDPQLVWRGKDYQDWSDLVVPAPPLYIQEKIHPKALIDDLLRHTQENTSEALQLDLFADFNGIPEGAPTAPSSTATTPTGRTA
>NC_009523.1|WP_011957655.1|3683817_3686874_-|restriction-endonuclease
MSQFFDQPILNSPYEYPARHWKLENGQPTGEIIHGRRRAEFITPIPRLKKRRAAQQAEMIFDEGLGLSTATQQYDPTSIINEVRSHVDAWRALPPGQWQVTPETARLLHHWRHHQFSSVRPFFCQIEAVETVIWLTEVAPHTAAGKGLLDHLARANRDANPELNRLALKLATGAGKTTVMAMLIAWQTVNAVRHPQSKRFTRGFLIVTPGITIRDRLRVLLPNDTENYYTTRELVPIDMIEDIHRARIVITNYHAFKLRERMELSAGGRALLQGRGEPIQTTETEGQMLARVMPELMSMKNILVLNDEGHHCYREKPRDPEEEDLTSEEKKEAEKNNEAARLWITGIETVARKIGVSRVIDLSATPFFLRGSGYAEGTLFPWTMSDFSLMDAIECGIVKLPRVPVAENIPGDEMPMYRNLWEHIRKDMPKKGRGKAGDLDPLKIPTRLQTALQALYGHYEKTFRIWEQAGIRVPPCFIIVCQNTAISKLVYDYVAGFVRQNDDGTSTLVNGQLPLFRNFDETTGNPLPRPNTLLIDSEQLESGTALDDNFRAMAADEIERFRRAIIERTGDARKAESLTDQDLLREVMNTVGKPGQLGEQIRCVVSVSMLTEGWDANNVTHILGVRAFGTQLLCEQVIGRALRRQSYEVNAEGLFNPEYADIFGIPFDFTAKPVVVRPQPPRQTIQVRAVRPERDHLEIRFPRVQGYRVELPDERLAAKFTEDSILELTPALVGPTITRNQGIIGEAVDLTLAHLEDMRPSALLFNLTKHLLYNKWRDPGEEPKLHLFGQLKRITGEWLDRCLVCKGDTYPALLMYQELADMACNKITAAITREFQDRRPIKALLDPYNPTGSTAYVRFSTTRQTLWDTAGPPPKCHVNWIVLDSDWEAEFCRVAESHPRVLAYVKNHNLGFEVPYRYGSETRAYRPDFIVLVDDGRGPHDPLHLVIEIKGYRGEDAKEKKSTMETFWIPGVNNLKTYGRWAFAEFGDIWQIQKAFDQLLEQMIRPHGAAERAEAGTD
>NC_009523.1|WP_011957656.1|3687408_3688872_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTLLHQLTLSDAREALMRGEITSVELTDALLARIAAVEPQVRAFLTIDAEGARAQAQAADARRAAGDTSPLLGIPLGIKDVISTQGVRTTCASKMLENYVPVYDATAVARLKAAGAVLIGKLNCDEFAMGSSTENSAFQQTRNPWNLERVPGGSSGGSAAAVAAGEAPATLGTDTGGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIILRVIAGADPFDATCTDHPVPDYEAALTGDIRGLRIGVPREYFVAGMQPEVESAVRVAIDVLRDQGAEVREISLPHTPYALPVYYLIAPAEASANLARFDGVRYGLRVPGESYFDELERTRGAGFGPEVRRRIMLGTYALSAGYYDAYYKRAQQVRTLIRRDYQQAFEQVDVIAAPTTPTVAFPIGAHSDDPLAMYLEDVCTLPLNLAGLPGLVVPCGFAAGLPIGLQLIGRAFDEETLLRIGDAYQRVTDWHTRMPDLPVE
>NC_009523.1|WP_157041332.1|3688871_3690284_-|undecaprenyl-phosphate-glucose-phosphotransferase
MVRTLLILALIACDSLALNGAFVGVYLWAVRADAEFAASLATVGSTTWLITLLIMNVSMAVAFVGSSLYSLRRGVSRVDEFFKVIVTVSLGTFATLIINAMQPQFGRDPLPWNEQVLVSGWIGAVAGVVALRWAHRSVLTALRRRGIDVRRVIIVGTRDPGRVVLNTIRRQPEMGYHVVGFISNSTPVGTLVEGVPVLGKPAALGRVIRAAQADEVIIAVSGRTPAEVLDLVTLAEDESVEIKLYPDAFQLITNNDISIGDVSGLPLIGIRNVALDSPINRALKRTLDLVVAILVLTLSSPVMLLIALLIKFESRGPVFFVQERVGLDGKPFPTFKFRTMRVDAPLIGNWTTKDDPRVTTLGRFLRRYSLDELPQFINVIRGEMSVVGPRPEQPVWVERFSQSIPRYMRRHKQKAGITGWAQVNGLRGDTSIEERTRYDLYYVENWSLLFDIKIIIKTVVDILSGKNRGY
>NC_009523.1|WP_011957658.1|3690306_3691206_-|glycosyltransferase-family-2-protein
MASLALVIANYNTRDLLRACLRSITEDDPRCAISIWVVDNASNDDSAAMVRTEFPHVRLIVSPHNGGFAFANNLALRAILDETDAADYVMLLNPDTVVPRGALDLLVDYMEAHPDVGACGPKLLLPDGSLDLACRRSFPTPEVAFYRMIGLSRLFPRYPRFARYNLTYLDENCETEVDSVVGACMLVRASVVREVGLLDEAFFMYGEDLDWAYRIKQYGWRIMYVPSVTVYHHKRASSSQRPVQAIRWFYDAMRIFHRKHFAATTPALLNAMIETGITLKEFLSLGSNLIRPPVARRAR
>NC_009523.1|WP_011957659.1|3691344_3692130_-|tryptophan-synthase-subunit-alpha
MSRIAETFAYLRAAGRTALMPYLMTGYPERDSALELAPALEAAGADLFELGVPFSDPLADGATIQRASERALANGIRLEHCIETVAGLRKRGVRAPIVPMGYYNPFLQYGLERLARDMADAGADGLIIPDLPPEEAHECHAACRAHGLDLIFFVAPTTPDERIDRIAALASGFIYCVALTGVTGARRELWSGLPAFLERVRRRTSLPLVVGFGISSAAHVREAGRYAAGAIVASALINVIEQAPPGEYVARAVDFVRSLRG
>NC_009523.1|WP_011957660.1|3692261_3692624_+|hypothetical-protein
MPRNTIIAGAALTLLALSTYFGTGMSSVTALIPAFFGVPLILLGWLAQNGQRRKTMMHIAVALGALGFIAPMSRIVPSLGSFELNVATGANIAMALICGIYVALGVRSFIEARRNPPATT
>NC_009523.1|WP_011957661.1|3692719_3695107_-|pyruvate-dehydrogenase-E1
MIDVAPGQQTGTPVAITPERLAVLDAIQRRILWLATFMVHHANHVRPNLDGTKIGGHQASSTSLVTILTALYFHFLRPGDRVSIKPHASPAFHAVQYLLGRLPRQYLATLRAYGGLQAYPSRTKDPDDVDFSTGSVGLGAVAPAFAALAHRYAKLHFGHVTSRRFIALVGDAELDEGNVWEAILDEALEGLDNLIWIVDLNRQSLDRVVPGIRAARLKRLFAENGWQVLEAKYGRRLQALFRQPGGDALRQRIDDMSNEEYQALIRLPGHELRPRLCDDPAGRGDRIARVIADIPDAELPAVLSNLGGHDLAELFDVLAQADASVGKPTIIFAYTIKGWGLPIAGHPHNHSMLLTAEQIEALRIAHGIAPGAEWDAFAPGTPEADLCAEVAARLYPPEKPPVVACDPALIPADLDVAIPERTSTQDAFGRLLVRLADTPIGERIVTSSPDVSVSTNLAGWINKTGVFTPVEHPDYETESYRLLRWKRGPSGRHIELGISEMNLFMLLGMMGLSAELCGQPLIPIGTVYDPFVCRGLDALIYSVYSGAKFIFAGTPSGITLSPEGGAHQSTITPSIGAELPKLRAYEPCYAQEVAWLLLEAIRECCDRVHGQATYLRLSTRPIDQAPFNAALERVGRAELRRQVVMGGYRLYDWRFGDQTVITRRGDGRPYQVMIAAVGAIVPEALEAAAYLQREGVAVTVLNLVSPKRLFERWRAARDRDPLGWLVLPEERRAPIVTVQDGASHSLAWLGSVYGVPVAALGVDDFGQSGARADLYRHFGIDPTSIAEAAFRMIDE

Crispr_ID: NC_009523_67

• CRISPR_ID: NC_009523_67
• CRISPR_location: 3683476-3683595
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_67

Consensus_repeat	Method
GTGTTTTTTCCGGTTTTCTTATCCCTTCGCAT	CRISPRCasFinder

spacers of NC_009523_67

>67.1|3683508|56|NC_009523|CRISPRCasFinder
TTCCCGTGTCGCTGCCTGTCCCGTGTGACCTCACGCGGAGACGCGGAGGCGCGGAG

CRISPR arrays and Neighbor proteins around NC_009523_67

CRISPR arrays

The CRISPR arrays of NC_009523_67

>merge|NC_009523|67|3683476-3683595|CRISPRCasFinder
GTGTTTTTTCCGGTTTTCTTATCCCTTCGCATTTCCCGTGTCGCTGCCTGTCCCGTGTGACCTCACGCGGAGACGCGGAGGCGCGGAGGTGTTTTTTCCGGTTTTCTTTTCCCTTCGCAT

>NC_009523|67|64|3683476-3683595|CRISPRCasFinder
GTGTTTTTTCCGGTTTTCTTATCCCTTCGCAT	TTCCCGTGTCGCTGCCTGTCCCGTGTGACCTCACGCGGAGACGCGGAGGCGCGGAG
GTGTTTTTTCCGGTTTTCTTTTCCCTTCGCAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957652.1|3674303_3675368_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293817
NC_009523.1|WP_083763375.1|3680395_3682885_-|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_011957660.1|3692261_3692624_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957654.1|3678301_3680392_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|350194
NC_009523.1|WP_011957655.1|3683817_3686874_-|restriction-endonuclease	unknown	unknown	gnl|CDD|368155
NC_009523.1|WP_011957651.1|3671533_3674314_+|N-6-DNA-methylase	unknown	unknown	gnl|CDD|280533
NC_009523.1|WP_011957656.1|3687408_3688872_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl|CDD|234572
NC_009523.1|WP_011957649.1|3670181_3670910_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_009523.1|WP_157041334.1|3696050_3696662_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl|CDD|273139
NC_009523.1|WP_157041103.1|3682881_3683295_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957648.1|3669435_3670170_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_009523.1|WP_011957662.1|3695125_3695566_-|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|366864
NC_009523.1|WP_011957663.1|3695562_3695964_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|376187
NC_009523.1|WP_011957658.1|3690306_3691206_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|224137
NC_009523.1|WP_011957647.1|3668906_3669254_+|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009523.1|WP_157041332.1|3688871_3690284_-|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl|CDD|274396
NC_009523.1|WP_011957661.1|3692719_3695107_-|pyruvate-dehydrogenase-E1	unknown	unknown	gnl|CDD|225329
NC_009523.1|WP_083763305.1|3668510_3668879_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NC_009523.1|WP_011957659.1|3691344_3692130_-|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl|CDD|237285
NC_009523.1|WP_011957653.1|3675658_3676621_+|IS110-family-transposase	unknown	unknown	gnl|CDD|376564

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957652.1|3674303_3675368_+|MBL-fold-metallo-hydrolase	gnl|CDD|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	2.04406e-31
NC_009523.1|WP_083763375.1|3680395_3682885_-|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.51767e-14
NC_009523.1|WP_011957661.1|3692719_3695107_-|pyruvate-dehydrogenase-E1	gnl|CDD|225329	COG2609, AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion].	7.24365e-176
NC_009523.1|WP_011957654.1|3678301_3680392_-|DEAD/DEAH-box-helicase	gnl|CDD|350194	cd18807, SF1_C_UvrD, C-terminal helicase domain of UvrD family helicases. UvrD is a highly conserved helicase involved in mismatch repair, nucleotide excision repair, and recombinational repair. It plays a critical role in maintaining genomic stability and facilitating DNA lesion repair in many prokaryotic species including Helicobacter pylori and Escherichia coli. This family also includes ATP-dependent helicase/nuclease AddA and helicase/nuclease RecBCD subunit RecB, among others. UvrD family helicases are DEAD-like helicases belonging to superfamily (SF)1, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF2 helicases, SF1 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	9.46168e-15
NC_009523.1|WP_011957655.1|3683817_3686874_-|restriction-endonuclease	gnl|CDD|368155	pfam04851, ResIII, Type III restriction enzyme, res subunit.	0.000311735
NC_009523.1|WP_011957651.1|3671533_3674314_+|N-6-DNA-methylase	gnl|CDD|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	3.03657e-14
NC_009523.1|WP_011957656.1|3687408_3688872_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl|CDD|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NC_009523.1|WP_011957649.1|3670181_3670910_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	6.53123e-28
NC_009523.1|WP_157041334.1|3696050_3696662_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl|CDD|273139	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. [Fatty acid and phospholipid metabolism, Biosynthesis].	2.95338e-26
NC_009523.1|WP_011957648.1|3669435_3670170_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	3.94468e-28
NC_009523.1|WP_011957662.1|3695125_3695566_-|DUF86-domain-containing-protein	gnl|CDD|366864	pfam01934, DUF86, Protein of unknown function DUF86. The function of members of this family is unknown.	2.61232e-20
NC_009523.1|WP_011957663.1|3695562_3695964_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	5.67098e-22
NC_009523.1|WP_011957658.1|3690306_3691206_-|glycosyltransferase-family-2-protein	gnl|CDD|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	7.83664e-59
NC_009523.1|WP_011957647.1|3668906_3669254_+|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	7.13239e-11
NC_009523.1|WP_157041332.1|3688871_3690284_-|undecaprenyl-phosphate-glucose-phosphotransferase	gnl|CDD|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	4.89331e-161
NC_009523.1|WP_083763305.1|3668510_3668879_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	7.34695e-13
NC_009523.1|WP_011957659.1|3691344_3692130_-|tryptophan-synthase-subunit-alpha	gnl|CDD|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	6.24028e-130
NC_009523.1|WP_011957653.1|3675658_3676621_+|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	7.07946e-20

Protein sequences

>NC_009523.1|WP_157041103.1|3682881_3683295_-|hypothetical-protein
MTRKKSASTNAGKSIEALTHKHDKRKNIPTAEYQAVMKPEEQAPRLLRYPRNTDLDPQLVWRGKDYQDWSDLVVPAPPLYIQEKIHPKALIDDLLRHTQENTSEALQLDLFADFNGIPEGAPTAPSSTATTPTGRTA
>NC_009523.1|WP_083763375.1|3680395_3682885_-|site-specific-DNA-methyltransferase
MILGDSLQVMASLAEREGLRGKVQMIYIDPPYGIKFNSNFQWSTTSRDVKDGRPEHITREPEQVKAFRDTWRDGIHSYLTCLRDRLTVARDLLTESGSIFVQIGDENVHRVRCLMDEVFGPDNFVRQIAFAKTGSMVSDELGRTSDYLLWYAKDKEYIKYRQLYSKKLPDAFYSNVELADSSVRKITHAEMVDPLLLPAGARVFRLVSLESAGPSGEDTPLEFEGEKFRPSKNGHWKLTYPDSMEALKKTGRMVKDGNKLRWKYYIDDYPLKVLSEVWSDTASFNPDQRYVVETRTKVVERCILMTTDPGDLVLDPTCGSGTTAYVAEQWGRRWITIDTSRVALALARARLMGARYPYYLLADSPEGRRKEAELSGRSYVEKPTYGDIRQGFVYERVPHITLKSIANNAEIDVIYETWQPQVLEALARLNAALRGHTKPFRVTNGGREGKEVRFDAPEGATFTMPSGEVVKAYELVEWEVPRQAPADWPETARQPLADFWAARIARQREIDASIARNADIEYLYDRPYIDNRKVRVAGPFTVESLSPHRTLFVDENDELIDPLRVRELQADYQPPPGFEQMVLENLKAAGVQQVHREDRISFTSIVPWPGELVCAEGRYLEGATEKRAAIFIGPEFGTVSRPDLVAAAREAADASFDVLIACAFSFEAHASEFNRLGRIPVLRARMNADLHMGGDLKPTGKGNLFVIFGEPDIKLLHEPDGRIRVQIRGVDVFDPSTGEIRSDSTDGIACWFIDTDYNEESFFVRHAYFLGQNDPYKALKTTLRAEINEEAWATLNSDTSRPFAKPASGRIAVKVINHLGDEVMKVFRV
>NC_009523.1|WP_011957654.1|3678301_3680392_-|DEAD/DEAH-box-helicase
MHFRIADTFTASLARLTSEEQKAVKVTVFDLQADPSSPGMQFHKIEKSRDKNFWSVRVNRDLRIIVHRSHDSLLLCYVGHHDQAYAWAERRRLEVHPRTGAAQFVEIRERVEDSVVTRRPAGGERDVPVPSPQTARLPLAHCADEELLSYGVPVEWLSDVKQADEDGLLALAEHLPAEAAEAVLELATGGKPTPRPVLPAADAFVHPDAQRRFRLMTDVEDLKRALEYPWDRWTIFLHPAQREWVEKDFNGPARVAGSAGTGKTVVALHRAASLARRHPDARVLLTTFSDALANALQSLFRRLIAGEPRLAGRVDIRALNAVGERLYTLHFGAPRLVARETVERYLVEAAQGSPAARFPAAFLLDEWTEIVDAWQLASWEDYRTVPRLGRKTRLPEARRAELWAVFEAVNRRLEQEGWLTRARLFGRLAEKIQTLAQPPYDFVVVDEAQDMSIPQLRFLAAFDAKATNRLFFAGDLGQRIFQQPFSWASLGVDVRGRSRTLRVNYRTSHQIRAQADRLLAPQLTDVDGNVEDRRGTVSVFNGPPPVIRVFDNEEQEAAGVADWLKEQLQEGVAPNEIGIIVRSDAQVARARRAAELAGLSSAVLDERIEMQHGHASICTMPLAKGLEFRCVAVMACDDEVVPLNSRIENITDDSDLEEVYNTERHLLYVACTRARDALHVSAVTPASEFLGDLIRP
>NC_009523.1|WP_011957653.1|3675658_3676621_+|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPLETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIPMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTIKRTEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957652.1|3674303_3675368_+|MBL-fold-metallo-hydrolase
MTFEHSVKVAFLDVGQGDSIVVTVPNTGEAVIIDCPEADTVIEYLRNERIHSIRALIITHLHLDHFKDAVGFLENCSSQLNIKCEHLIFNWPSNLQKLAPDADGHSEIYRNPKRRNQARLTAYQELVAWTKRNTRSCFPLLRPNNGYRLRIKGTIKDAIRILQPSHGCMGSLMQSGLNNTSAVLRIEGPGSSALLTADIEPDGWNQLRSSHSDLQSDVLKFPHHGAWKNADPADILTAVDPSIVIISVGTDGIQYSHPNVHVFAAIRNRSNTRLLCTQATSRCVDNPDSHASQIDAILQAHSRGSGHIRTHRGCPCAGTIVIELGDQVTVLQPDISVHRNQIILRFLTSHRCRI
>NC_009523.1|WP_011957651.1|3671533_3674314_+|N-6-DNA-methylase
MLSQAAPSHERLGFAPLPDNARQAVYDSLTACGFAHEAILESYNFTGRGGDFTLNMLAFADRVRRNPAEYAGCTVYNATNGLPDREIVSVLAQTAAPFHIIHREDRFSFWATTLEQNTINPIDLGAEISYAQLSQVLQEYKIDLAPDQIVSVKQGRSQFAHPHLRDLEPLQLALWAIDVTRDTLVDTFGRAVTQLRADMNDRPDPEITGLAIRMLGAMILADTGALDASMRQRRSDLSFDQLLLGAARKYPTYFGDMHLFLERDYRRIERAYDILRRIYYSGFVPDMLSALYTKAYGKEKRKKLGFYDTPLYLTRRILHNIPVEFLPPKQRIVVDMTCGWGSFLIAGVERLSQLSDMRDQSLRDHIIGNDIDIFTAQLAGLGLLLATSEDSWHIDHEDARQWSWIDMHTPGIIVGNPPFRGRRDQPESLEDLMPTKGKRTRVEAANAYLDLAIRNVRTGGYIAMIMPQSFLVAEAGPDVRRNLLESCDVTEIWELPGRMFPDAKVQPIVLFARKESGKRKTVFPIRTRNVQKSTIEAFKKSGIFTASNIASGFSIPEDGDIKTSAKETYRIDAPVILSDVDWHTLRQRCRNLAEYATIFPGTIRGKKKENKRWLDDPEQREVLWLTNALKTVPGLWHINYRAAISKTYPRDFEEPRLEYQDILDSEKIIMVAKPNPSWGRRAKAVVERQGYHVSHSFWVVWPDEKTNPYLSKEALTAIMNWHVSNAWIAEYLNYPWIERRIIETIPIPRDLSPDDCLALTDAVRAIERAAYAHQRLPEDSVQSIDTILRRAYDLDDATYARLRAISEWDEHPHITLDPQPDRSVADYIISGIVEEVQAEKGVVSLWISGFDDAQTVPIDPLMPGWMLRPETPFRAKIPFVHKRKRSLEGVVWNSFAPQQHTYQNEDELVQELARIFAFAENKTDDV
>NC_009523.1|WP_011957649.1|3670181_3670910_+|Uma2-family-endonuclease
MSVETATSAGAAVAAPPDERPPLHSGDRLTRAEFARRYALHPEIKKAELIDGVVYVASPTRHRQHGKPHSLLVGWIIAYAAATPGVDFSDNATVLLDLENEHQPDALLRLEPIHGGRSRVTRDDYIEGPPDLIVEVAASSAAYDLHDKKRVYARSGVQEYLVAQAYERRVDWWELREGVFTPLPLEADGTLRSRVFPGLWLDPAALWAGDAAALLATLQRGLADPAHAAFVERLRRAEQGAA
>NC_009523.1|WP_011957648.1|3669435_3670170_+|Uma2-family-endonuclease
MSVETATSAGAAVATPPDERPPLHSGDRLTRAEFARRYALHPEIQKAELIDGVVYVASPTRHRQHGRLHLILVAWLGVYSAATPGVDGSNNATVLLDLENEHQPDALLRLEPIHGGRSRVTRDDYIEGPPDLIVEVAASSAAYDLHDKKRVYARSGVQEYLVAQAYERRVDWWELREGVFTPLPLEADGTLRSRVFPGLWLDPAALWAGDAAALLATLQRGLANPAHAAFVERLRATSGATPAS
>NC_009523.1|WP_011957647.1|3668906_3669254_+|nucleotidyltransferase-domain-containing-protein
MTASVSLDLPLRYLDKVRAILRQYVPDYDVWAYGSRVRGGAFAASDLDLVVRNPRHPLQPCDRIFDLRSAFLESDLPIRVDVMDWARIPPAFRQEIERGYVVVQAATEPTMHTTG
>NC_009523.1|WP_083763305.1|3668510_3668879_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MPVTTPGENSMAFQRGDVVLVPFPFSDLSTTKVRPAVVVSSSLYHATEPDLILAAITSRVAASSGPLDCVLHDWQVAGLRYPSAVKPVLFTLDPTRVIYHVGALTPVDLAEVAQRLRRALEL
>NC_009523.1|WP_011957655.1|3683817_3686874_-|restriction-endonuclease
MSQFFDQPILNSPYEYPARHWKLENGQPTGEIIHGRRRAEFITPIPRLKKRRAAQQAEMIFDEGLGLSTATQQYDPTSIINEVRSHVDAWRALPPGQWQVTPETARLLHHWRHHQFSSVRPFFCQIEAVETVIWLTEVAPHTAAGKGLLDHLARANRDANPELNRLALKLATGAGKTTVMAMLIAWQTVNAVRHPQSKRFTRGFLIVTPGITIRDRLRVLLPNDTENYYTTRELVPIDMIEDIHRARIVITNYHAFKLRERMELSAGGRALLQGRGEPIQTTETEGQMLARVMPELMSMKNILVLNDEGHHCYREKPRDPEEEDLTSEEKKEAEKNNEAARLWITGIETVARKIGVSRVIDLSATPFFLRGSGYAEGTLFPWTMSDFSLMDAIECGIVKLPRVPVAENIPGDEMPMYRNLWEHIRKDMPKKGRGKAGDLDPLKIPTRLQTALQALYGHYEKTFRIWEQAGIRVPPCFIIVCQNTAISKLVYDYVAGFVRQNDDGTSTLVNGQLPLFRNFDETTGNPLPRPNTLLIDSEQLESGTALDDNFRAMAADEIERFRRAIIERTGDARKAESLTDQDLLREVMNTVGKPGQLGEQIRCVVSVSMLTEGWDANNVTHILGVRAFGTQLLCEQVIGRALRRQSYEVNAEGLFNPEYADIFGIPFDFTAKPVVVRPQPPRQTIQVRAVRPERDHLEIRFPRVQGYRVELPDERLAAKFTEDSILELTPALVGPTITRNQGIIGEAVDLTLAHLEDMRPSALLFNLTKHLLYNKWRDPGEEPKLHLFGQLKRITGEWLDRCLVCKGDTYPALLMYQELADMACNKITAAITREFQDRRPIKALLDPYNPTGSTAYVRFSTTRQTLWDTAGPPPKCHVNWIVLDSDWEAEFCRVAESHPRVLAYVKNHNLGFEVPYRYGSETRAYRPDFIVLVDDGRGPHDPLHLVIEIKGYRGEDAKEKKSTMETFWIPGVNNLKTYGRWAFAEFGDIWQIQKAFDQLLEQMIRPHGAAERAEAGTD
>NC_009523.1|WP_011957656.1|3687408_3688872_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTLLHQLTLSDAREALMRGEITSVELTDALLARIAAVEPQVRAFLTIDAEGARAQAQAADARRAAGDTSPLLGIPLGIKDVISTQGVRTTCASKMLENYVPVYDATAVARLKAAGAVLIGKLNCDEFAMGSSTENSAFQQTRNPWNLERVPGGSSGGSAAAVAAGEAPATLGTDTGGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIILRVIAGADPFDATCTDHPVPDYEAALTGDIRGLRIGVPREYFVAGMQPEVESAVRVAIDVLRDQGAEVREISLPHTPYALPVYYLIAPAEASANLARFDGVRYGLRVPGESYFDELERTRGAGFGPEVRRRIMLGTYALSAGYYDAYYKRAQQVRTLIRRDYQQAFEQVDVIAAPTTPTVAFPIGAHSDDPLAMYLEDVCTLPLNLAGLPGLVVPCGFAAGLPIGLQLIGRAFDEETLLRIGDAYQRVTDWHTRMPDLPVE
>NC_009523.1|WP_157041332.1|3688871_3690284_-|undecaprenyl-phosphate-glucose-phosphotransferase
MVRTLLILALIACDSLALNGAFVGVYLWAVRADAEFAASLATVGSTTWLITLLIMNVSMAVAFVGSSLYSLRRGVSRVDEFFKVIVTVSLGTFATLIINAMQPQFGRDPLPWNEQVLVSGWIGAVAGVVALRWAHRSVLTALRRRGIDVRRVIIVGTRDPGRVVLNTIRRQPEMGYHVVGFISNSTPVGTLVEGVPVLGKPAALGRVIRAAQADEVIIAVSGRTPAEVLDLVTLAEDESVEIKLYPDAFQLITNNDISIGDVSGLPLIGIRNVALDSPINRALKRTLDLVVAILVLTLSSPVMLLIALLIKFESRGPVFFVQERVGLDGKPFPTFKFRTMRVDAPLIGNWTTKDDPRVTTLGRFLRRYSLDELPQFINVIRGEMSVVGPRPEQPVWVERFSQSIPRYMRRHKQKAGITGWAQVNGLRGDTSIEERTRYDLYYVENWSLLFDIKIIIKTVVDILSGKNRGY
>NC_009523.1|WP_011957658.1|3690306_3691206_-|glycosyltransferase-family-2-protein
MASLALVIANYNTRDLLRACLRSITEDDPRCAISIWVVDNASNDDSAAMVRTEFPHVRLIVSPHNGGFAFANNLALRAILDETDAADYVMLLNPDTVVPRGALDLLVDYMEAHPDVGACGPKLLLPDGSLDLACRRSFPTPEVAFYRMIGLSRLFPRYPRFARYNLTYLDENCETEVDSVVGACMLVRASVVREVGLLDEAFFMYGEDLDWAYRIKQYGWRIMYVPSVTVYHHKRASSSQRPVQAIRWFYDAMRIFHRKHFAATTPALLNAMIETGITLKEFLSLGSNLIRPPVARRAR
>NC_009523.1|WP_011957659.1|3691344_3692130_-|tryptophan-synthase-subunit-alpha
MSRIAETFAYLRAAGRTALMPYLMTGYPERDSALELAPALEAAGADLFELGVPFSDPLADGATIQRASERALANGIRLEHCIETVAGLRKRGVRAPIVPMGYYNPFLQYGLERLARDMADAGADGLIIPDLPPEEAHECHAACRAHGLDLIFFVAPTTPDERIDRIAALASGFIYCVALTGVTGARRELWSGLPAFLERVRRRTSLPLVVGFGISSAAHVREAGRYAAGAIVASALINVIEQAPPGEYVARAVDFVRSLRG
>NC_009523.1|WP_011957660.1|3692261_3692624_+|hypothetical-protein
MPRNTIIAGAALTLLALSTYFGTGMSSVTALIPAFFGVPLILLGWLAQNGQRRKTMMHIAVALGALGFIAPMSRIVPSLGSFELNVATGANIAMALICGIYVALGVRSFIEARRNPPATT
>NC_009523.1|WP_011957661.1|3692719_3695107_-|pyruvate-dehydrogenase-E1
MIDVAPGQQTGTPVAITPERLAVLDAIQRRILWLATFMVHHANHVRPNLDGTKIGGHQASSTSLVTILTALYFHFLRPGDRVSIKPHASPAFHAVQYLLGRLPRQYLATLRAYGGLQAYPSRTKDPDDVDFSTGSVGLGAVAPAFAALAHRYAKLHFGHVTSRRFIALVGDAELDEGNVWEAILDEALEGLDNLIWIVDLNRQSLDRVVPGIRAARLKRLFAENGWQVLEAKYGRRLQALFRQPGGDALRQRIDDMSNEEYQALIRLPGHELRPRLCDDPAGRGDRIARVIADIPDAELPAVLSNLGGHDLAELFDVLAQADASVGKPTIIFAYTIKGWGLPIAGHPHNHSMLLTAEQIEALRIAHGIAPGAEWDAFAPGTPEADLCAEVAARLYPPEKPPVVACDPALIPADLDVAIPERTSTQDAFGRLLVRLADTPIGERIVTSSPDVSVSTNLAGWINKTGVFTPVEHPDYETESYRLLRWKRGPSGRHIELGISEMNLFMLLGMMGLSAELCGQPLIPIGTVYDPFVCRGLDALIYSVYSGAKFIFAGTPSGITLSPEGGAHQSTITPSIGAELPKLRAYEPCYAQEVAWLLLEAIRECCDRVHGQATYLRLSTRPIDQAPFNAALERVGRAELRRQVVMGGYRLYDWRFGDQTVITRRGDGRPYQVMIAAVGAIVPEALEAAAYLQREGVAVTVLNLVSPKRLFERWRAARDRDPLGWLVLPEERRAPIVTVQDGASHSLAWLGSVYGVPVAALGVDDFGQSGARADLYRHFGIDPTSIAEAAFRMIDE
>NC_009523.1|WP_011957662.1|3695125_3695566_-|DUF86-domain-containing-protein
MIDPDIVLAKVAIIQRCLDRIRSVTHLDPNRLEDIDTQDIFVLNLQRAIQAAIDLGAHTLASQGRDMPATLREIFVALAEQGLLSSAVARAMQNMCGFRNIAVHDYRKLSLDVLKSILVHHLTDLEAYYREILALLPQPPSDQPVE
>NC_009523.1|WP_011957663.1|3695562_3695964_-|nucleotidyltransferase-domain-containing-protein
MTSVEIRINDVLGAEPGIAAVLLFGSAVRGRLRPDSDIDVATLFEHSAIPGIEERLALRQRLEEAVQRDVDLIVLNDAPTILAFQALRYGRLIACPRPRVYHEFVMRLVTEYADFKRIRKPIEDALIRRSMLQ
>NC_009523.1|WP_157041334.1|3696050_3696662_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MRSSFRYNAGWRGCVYTRHLPNLLGLFRIVATPALYILIALGTPSGDLGAVVLLVAMAISDIADGRIARKLKVVSPLGVFLDTISDKIFVAGALLPMVERGLLPGWVALIIIIREFAVSGLRSYAAAEGEVIAARQWGKQKLVFTVAALIWCLVDAAVRAIPGSPEALLTLASFWPLVLGLALIWTIGSGVEYFWKAMPLLRR

Crispr_ID: NC_009523_68

• CRISPR_ID: NC_009523_68
• CRISPR_location: 3750413-3750527
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_68

Consensus_repeat	Method
ATCCGTGTTCTATTCATTAGAAACCACGGAT	CRISPRCasFinder

spacers of NC_009523_68

>68.1|3750444|53|NC_009523|CRISPRCasFinder
TGCCACGGCTGTTGTTCTTCCTTGATCCGTGCCGATCCGTCGCACCCGTGCTC

CRISPR arrays and Neighbor proteins around NC_009523_68

CRISPR arrays

The CRISPR arrays of NC_009523_68

>merge|NC_009523|68|3750413-3750527|CRISPRCasFinder
ATCCGTGTTCTATTCATTAGAAACCACGGATTGCCACGGCTGTTGTTCTTCCTTGATCCGTGCCGATCCGTCGCACCCGTGCTCATCCGTGTTCTATTCATTAAGAAACCACGGA

>NC_009523|68|65|3750413-3750527|CRISPRCasFinder
ATCCGTGTTCTATTCATTAGAAACCACGGAT	TGCCACGGCTGTTGTTCTTCCTTGATCCGTGCCGATCCGTCGCACCCGTGCTC
ATCCGTGTTCTATTCATTAAGAAACCACGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957691.1|3736601_3738026_+|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl|CDD|273198
NC_009523.1|WP_011957686.1|3729871_3730669_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223488
NC_009523.1|WP_011957693.1|3740281_3744946_+|glutamate-synthase-large-subunit	unknown	unknown	gnl|CDD|236968
NC_009523.1|WP_011957695.1|3750680_3751742_-|homoserine-dehydrogenase	unknown	unknown	gnl|CDD|235763
NC_009523.1|WP_041333807.1|3754070_3754640_+|NADH-quinone-oxidoreductase-subunit-C	unknown	unknown	gnl|CDD|376317
NC_009523.1|WP_011957704.1|3759363_3759690_+|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl|CDD|180218
NC_009523.1|WP_011957685.1|3728495_3729860_+|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|236896
NC_009523.1|WP_011957703.1|3758661_3759309_+|NADH-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl|CDD|235844
NC_009523.1|WP_011957694.1|3746272_3750154_+|PA14-domain-containing-protein	unknown	unknown	gnl|CDD|271325
NC_009523.1|WP_011957702.1|3757263_3758622_+|NADH-quinone-oxidoreductase-subunit-H	unknown	unknown	gnl|CDD|376297
NC_009523.1|WP_011957698.1|3753286_3754093_+|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl|CDD|237822
NC_009523.1|WP_011957701.1|3755929_3757252_+|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|235637
NC_009523.1|WP_011957690.1|3735240_3736356_+|dipeptide-epimerase	unknown	unknown	gnl|CDD|239435
NC_009523.1|WP_011957689.1|3732588_3735123_-|alanine-racemase	unknown	unknown	gnl|CDD|143481
NC_009523.1|WP_011957700.1|3754671_3755796_+|NADH-quinone-oxidoreductase-subunit-D	unknown	unknown	gnl|CDD|180385
NC_009523.1|WP_011957688.1|3732009_3732573_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957697.1|3752618_3752975_+|NAD(P)H-quinone-oxidoreductase-subunit-3	unknown	unknown	gnl|CDD|180638
NC_009523.1|WP_011957692.1|3738393_3739830_+|ammonium-transporter	unknown	unknown	gnl|CDD|273292
NC_009523.1|WP_011957687.1|3731243_3731957_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223487
NC_009523.1|WP_011957696.1|3751861_3752425_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957691.1|3736601_3738026_+|type-I-glutamate--ammonia-ligase	gnl|CDD|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0
NC_009523.1|WP_011957686.1|3729871_3730669_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223488	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	1.14307e-137
NC_009523.1|WP_011957693.1|3740281_3744946_+|glutamate-synthase-large-subunit	gnl|CDD|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NC_009523.1|WP_011957696.1|3751861_3752425_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.19446e-13
NC_009523.1|WP_041333807.1|3754070_3754640_+|NADH-quinone-oxidoreductase-subunit-C	gnl|CDD|376317	pfam00329, Complex1_30kDa, Respiratory-chain NADH dehydrogenase, 30 Kd subunit.	9.03257e-50
NC_009523.1|WP_011957704.1|3759363_3759690_+|NADH-quinone-oxidoreductase-subunit-NuoK	gnl|CDD|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	7.79138e-36
NC_009523.1|WP_011957685.1|3728495_3729860_+|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|236896	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional.	3.78764e-77
NC_009523.1|WP_011957703.1|3758661_3759309_+|NADH-quinone-oxidoreductase-subunit-J	gnl|CDD|235844	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J.	8.13137e-47
NC_009523.1|WP_011957694.1|3746272_3750154_+|PA14-domain-containing-protein	gnl|CDD|271325	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	8.91732e-122
NC_009523.1|WP_011957702.1|3757263_3758622_+|NADH-quinone-oxidoreductase-subunit-H	gnl|CDD|376297	pfam00146, NADHdh, NADH dehydrogenase.	9.43983e-118
NC_009523.1|WP_011957698.1|3753286_3754093_+|NADH-quinone-oxidoreductase-subunit-B	gnl|CDD|237822	PRK14819, PRK14819, NADH-quinone oxidoreductase subunit B.	0
NC_009523.1|WP_011957701.1|3755929_3757252_+|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	5.64089e-27
NC_009523.1|WP_011957690.1|3735240_3736356_+|dipeptide-epimerase	gnl|CDD|239435	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	2.2875e-105
NC_009523.1|WP_011957700.1|3754671_3755796_+|NADH-quinone-oxidoreductase-subunit-D	gnl|CDD|180385	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D.	0
NC_009523.1|WP_011957687.1|3731243_3731957_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	6.45698e-134
NC_009523.1|WP_011957697.1|3752618_3752975_+|NAD(P)H-quinone-oxidoreductase-subunit-3	gnl|CDD|180638	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated.	6.0505e-44
NC_009523.1|WP_011957692.1|3738393_3739830_+|ammonium-transporter	gnl|CDD|273292	TIGR00836, Ammonium_transporter, ammonium transporter. The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally characterized members of the Amt family are ammonia or ammonium uptake transporters. Some, but not others, also transport methylammonium. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf. [Transport and binding proteins, Cations and iron carrying compounds].	1.76434e-147
NC_009523.1|WP_011957689.1|3732588_3735123_-|alanine-racemase	gnl|CDD|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	5.99516e-168
NC_009523.1|WP_011957695.1|3750680_3751742_-|homoserine-dehydrogenase	gnl|CDD|235763	PRK06270, PRK06270, homoserine dehydrogenase; Provisional.	1.72522e-151

Protein sequences

>NC_009523.1|WP_011957694.1|3746272_3750154_+|PA14-domain-containing-protein
MHLRTLIAVVCALSLVMTSLAVTLVTSSAGEAALAQQTQPYRVFQFAVGAQAPVGQFNNPSGVAVAPDGTVYVADSDNHRIQRFSAAGELLGAWGSPGTGDGQFSSPRSVAVAPDGTVYVADTGNHRIQRFSAIGTFLGTWGSAGLLIDGQFWYPSDVAVTSDGTVYVVDDHRIQRFSATGVFLGAWGWRPGKRVAVVPDNTVYVADSDNHRIRRFSAIGAFLGEWGSRGSGEGQFNTPSDVAVAPDGTVYVADYWNHRIQRFSADGTFLGAWGSSGSGNGQFVGHLSVEVAPNNTVYVADSFRIQRFSATGTFLGAWGSRGSDQGQFSSPSGAAVASDGTVYVADSNNHRIQRFSADGTFLGAWGAEGSGDGQFVYPRSVAVASDGTVYVADSNNHRIQRFSATGTFLGKWGSEGSSDGQFIYPLNVAVALDGTVYVADVAKGSIQRFSATGAFIGTWGSQEGAGNLHFYPAGLAVASNGVVYVANANKSRIERFSATGTFLDAWGSLGINDGQLWSPRGIAVAPDGTIYVADTGNGRIQHFSATGIFLGSWDSWSIFDRQLLQSPLESPEDVAVAPDGKVYVVDNGNHRIQVFGTDYPNAWRGEFFANDWLTGPVLHVENVPDLFLNRSWVGQPAATIPADHFTSRWLRYVNFPTTGRYRFTIRADDGVRFWIDDRLVVESWQPQLLTREVTVELSAGYHKLLVEHWDRDGGATLALEWARADNTTPTPTATPSPTPTPSPTLTPSPTATPSPTPTPPIDSAIGVDLTIGLYRNPNSQERAVYEEMIRYLADALFEVSNGAHKLRTVRIYPNNTSAKDIIWVERCWPSAHISGYGRAQHGLRIQMCDIFDFGSGSYNYLQNRRAWENAGYTIAHEMGHYLYSLYDEYRNDRRTCDWTNDPGAPCRDDIPVSPSVMHSQWNATGGQYSWLNFSSAANYSTRTAQYRVYRASGWETLVRRPELDPRDGVLAYYPRRLYHPELRNVAPASGQLPRIDLITGHQARSMLQIIWEPTSGASLASADITASLFALEGNNVTYPQPVRLIAVLQRTLPIAGATVRGEVVLPNGQTQSLTFRDDGVAPDALADDGQYSALFVPTQNGQHQYRVTFTNPTQAAVEVYNGLHLAPPPPGYQPDDSLLAPVPVVENFTVSAQTTVVVSGVRSDDHGNDPGTASLLNTDNLDQWGHIERGGDRDLFRITVAQDMTIVVRVTDLAAGMQPRLRLLAGDGTTPISALSLAKNYPALVYTARAGSVIYAEVSHVDPAASGGVYRISAGSPIVSDGLNQVHIPIVIR
>NC_009523.1|WP_011957693.1|3740281_3744946_+|glutamate-synthase-large-subunit
MNQLKNLKQRGLYDPRFERDACGIGFVARLSGEPDHAILAYALMAVGRMAHRGGVAADGKSGDGAGVLTQIPRAFFARELAIRGIRYPVDDLAVGMFFLPQNEGHRNTARSVVEQVLAQYGMALLAWRPVPVNPHALGASARETCPVIEQALIARPPHNHTAPNAYERALYLARRTIEAEARAHHLEGFSIPSLSSRTLIYKGLLVAPALPDFYEDLRDPLYETAIALYHQRYSTNTFPSWERAQPFRMLSHNGEINTLRGNIIWMQAREAEWRRAAMEVEQPSLIEAAIDGDPLAMALSAATIGPVVDTSGSDSAMLDNVLELLVMGGRDIRHSLTMLVPEAWERVHDMEPARRAFYQYHAGLMEPWDGPAALAFCDGQVVGLALDRNGLRPARYLLTDDGLVICGSEVGAVVIDESRIVRKGKVGPGQMIAADLRTGRFEENDEIRSTLAARRPYAEWLKRHMRVLAPAGAPRVSEPDEPESHASRESKSALLGELQRAFGYTAEELAVVLKPMLRDGQEPVGSMGDDTPTAVLADRPRPLYNYFKQRFAEVTNPPIDPIREELVMSLSFSLGRRGHLLLEKPEHAHLLRLASPVLNNEHLAMLRDLRDPAFATATLNATFVADDGVQGMLSALDRLCREAEAAIAADKVILIISDRGVDERHAPIPALLALGAVHQHLIRVGLRTSVSLVVESGEPREVHHLACLVGMGAEAVNPYLALATVRALAVERDEVRGKAAETHDRRAAGELADEAEQNYIHALEKGLLKVMSKMGISTVDSYCGAQIFEIVGLAKEVTERCFAGVPSHLGGYGFRKLAADVLEHHDAAFSNRLPLLAGRSTLPHPGYYKFKKDGEYHAFSPAVVHALQRAANGGSYADYLAYSKLVHDRPPVELRDLLEIVPPDEREAGPAAPIPVDDVEPIEAIVRRFSTAAMSHGSTSAEAHETLSIAMNRLGGMSNSGEGGEDPARYNNERNSTIKQVASGRFGVTPAYLASALELQIKMAQGSKPGEGGQIPGIKVSEEIARIRHTTPGVALISPPPHHDIYSIEDLAQLIYDLKQVNPRAAVSVKLVAEAGVGTIAAGVAKGGADVIHISGHSGGTGASPLSSIKNAGINWELGLAETQQTLVLNGLRGRVRLRVDGGFKTGRDVVMAALLGADEFSFGTAALIAEGCVMARTCHTNNCPVGVATQRPDLRARFPGKPEHVVNFFRHVAQEVREILASIGARSLNDIIGRTDLLRQVRRGHAGADALDLSALLARFDRPGDPIRNVQPWNGMIEIGALNRRLIEDAACAIDHQLHVELHYPITNVDRTVGATLSGEIGRRFGEAGLPEGMITVSFRGSAGQSFGAFLAPGMRLLLDGECNDYVGKGMAGGEIVVRPLPQARYPWHESTIIGNTCLYGATGGTLFAAGRAGERFAVRNSGAVAVVEGVGDHGCEYMTGGVVLVIGPTGRNFAAGMTGGMAYVYDENGAFPSRCNTEMVTLTMLDPADEDNVRALLVRHMELTGSPHAASLLERWEVARGAFWRVQPRGMETVRLPKALLRVRERTLGAHR
>NC_009523.1|WP_011957692.1|3738393_3739830_+|ammonium-transporter
MVRRRTKLMLGIGALAGLLIGTTGTSFAQEIDPAIAEMGVVTDTMWLLIAAFLVFFMQAGFALVEAGSTQSKNMINIMFKNFMDFCIAALAFWMIGWGIAYGATVGGFFGTDQFFLGDVREAGSVPTLALWLFQVVFAGTAATIVSGAMAERTKFVAYLIYSLVISILIYPVVVHWVWSGAGWLNDYDPTTTGDWGFTDFAGSTVVHSVGGWAALMGAWLLGPRLGRYGPDGKPREIPGHSAALAGLGVFILWLGWYGFNPGSQLAFKTQDDADAIALVAVTTTLAAAAGAVGAMITSWIKSGKPELGASLNGVLSGLVAITAGCAYMRPIDAVIVGLVAGPLYVISMKWLEALKIDDPVGAVPVHLVNGVWGTLAVGLFATIEGNTGTVGLFAGGGPQLLIAQIVGVLAIGVWSALTSFLLFFIIKRTIGLRVSPEEEELGLDIGEHGTVAYPDIHKMPEPETIRTITGKPASSTAE
>NC_009523.1|WP_011957691.1|3736601_3738026_+|type-I-glutamate--ammonia-ligase
MGMTPKDVLALIKEHDIKMVDVRFTDMPGTWQHFSLPASMLSEDDFVHGLGFDGSSIRGFQAINESDMLVVPDPDTAFIDPMLKIPTLALICDIRDPLTGENYSRDPRYIAKKAEEYLRSTGIADTAYFGPEAEFFLFSDVRFDQGSHFGYYFLDSDEGIWNSGADRGGKNLGYRPRYKEGYFPCPPLDTLQDVRSQITLNMMAAGIEVEVHHHEVATAGQCEIDMRFDSLLRMADKLVKYKYIVKNTARQFGLTATFMPKPLFGDNGSGMHCHQSLWKEGQPLFYDPKGYALLSDTARWYIGGILTHAPALLAICAPTTNSYRRLVPGFEAPINLVYSQRNRSAAIRIPTYSDSPKARRIEFRAPDPTCNPYLAFSAMLMAGIDGIKNRIEPPPPLDVDIYELTAEEKAHIRGTPGSLAESLDALEADHDFLLAGGVFTPDVIETYLDYKRSRELIQVAIRPHPYEFFMYFDA
>NC_009523.1|WP_011957690.1|3735240_3736356_+|dipeptide-epimerase
MTAPTTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGTRGYGEAAPFPAFNGETQDMAHAAILAARSLVEGADVREWRRIALALPALPGMTGSARCAIETAILDALTRRARLPLWAFFGGAATSLETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAPTARLILDGNCGYTAPDALRLLDMLGVHGIVPALFEQPVAKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMKCGIVEALDIAAIARTAGLHLMIGGMVESLLAMTVSACFAAGQGGFRFVDLDTPLFLAENPFDGGMTYHGGTIDLTLIEAGHGVTPRSPAL
>NC_009523.1|WP_011957689.1|3732588_3735123_-|alanine-racemase
MIDLDDLLAAGGRLASPVYARQFSGFSYDSRLTAAGELFLALRTPRGDGHAYIADALAAGATGVICEKPPADLSNTTMIVTDDPALLAARWAAARLRQVAPRVIGVTGSVGKTSATRAIAAVLSGLAPTFRSRRSFNSLIGLPVSLARLQDDHRFAVLEYGTAYPGELHRLTALFPPHVAVVTSAAPMRLSAFGSVADLVREYGALVAALPVDGWAVVNGDDPALAGLCDTTRARVLTFGTGASCDLRGEAPQYALNGTRMRVCYRGESVDTVIPLIGEPAVGAALAAVGVALVCGMTLERAAERLALVEPPAGRLRPHLARSSAIVIDDTVGAEPSAMLAALRTLAILPAQRRIAVLGDLPADSSIPGEQNDTYAAIGRLAARTADLLIWKGDAGTHVMRAVQRVRTGMSATLVHTIAGALEALPPDLGAGDLVLVCGGATARLERLVAALIDPSVNASQALVRQDAGWRATRIADPDRPTWVRIDLDAIRDNVRTLRSIAGVPVMAVLKADAYGHGAVRAARAALAGGAVALAVATLGEARTLREAGIGAPILALGYTPPWQVAQAARLGVAITVFDYDAARACAAVAETGVPVPVHVEVDTGMARTGLSVDELGPFLRSLAGLPGVHVEGLYTHFADADAADPGAAEAQLRRFRSALDAVTGAGLRPPVVHAANSAAMLRLPGARFDMVRPGIACYGLAPSPWVTLPAALRPALSFHSEVAQVRDLPPGTPVSYGGTFVTRRHSRIATIPVGYADGMRRAPPWREVLVRGRRAPVVGRICMDYAMIDVTDHAEVRRGDLVTLIGVQGDACITVAEVASWLGTISYDVVATILPRVPREVSE
>NC_009523.1|WP_011957688.1|3732009_3732573_+|hypothetical-protein
MRLRLLLAGVGLLLIGTLVMVFALVNWTGASGVRDEQMHAERVWYAQSRHHYRIVIRQRTRTGVCEQDLEIRNDRVQTVYLNQCAQPPIWTVPRLFSWVRQLGQPAGLCYPSSLQCTCRVSTHLQVLFDPQSGYPRQVLYEWGLRPNWESMDYWQSLVLGTDRVDCARRTRGGGVVEITVVSFMPLP
>NC_009523.1|WP_011957687.1|3731243_3731957_+|ABC-transporter-ATP-binding-protein
MPLLELKDVHTYYGNIHALKGISLAVEPGEIVTLIGSNGAGKSTTLRTISGLLKPRRGEVWFQGERIDHLPPHKIVEMGVIQAPEGRRIFPRLTVRENLEIGAFLRKDKAGIARDMERVFHLFPRLYERLNQRGGTLSGGEQQMLAIGRALMGQPRVLLLDEPSMGLAPVLVEQIFSIISDINAQGTTILLVEQNALMALAIAHRGYVLQTGEIVLADTAQALRENTLVQHAYLGVG
>NC_009523.1|WP_011957686.1|3729871_3730669_+|ABC-transporter-ATP-binding-protein
MALLEAQHITKQFGGLTAVNDVSLTIEAGSIVSVIGPNGAGKTTFFNVLTGIYKPTKGTIIFDGKDITGLRPDQITALGICRTFQNIRLFNAMTVLENVQVGMHTRLNAGLWQIIFGTPSVRAEEKASLERARELLRFVNLDDQRNQLARNLPYGDQRRLEIARALASSPKLILLDEPTAGMNPQETAEATDLIRRLRDELGITVVLIEHDMRVVMTISERITVLDYGTKIAEGLPHEIRSNPRVIEAYLGKGAAAHGMVKVEGG
>NC_009523.1|WP_011957685.1|3728495_3729860_+|branched-chain-amino-acid-ABC-transporter-permease
MATEKRQVSPSPSLWAQLRSTAGRGPAPYVLIAAYAAIVSALLLSNPTTGLGTDMVVVLFLLLMFVIYRAPTMLAFKLTLGTILLAVIMPIFGVLNPFYIDVVTKAGMFAALALGLNVVVGFAGLLDLGYVAFFAVGAYLWGIFSTPQISNIVPGMEPLHGSWFWLFLAIGLVVGALFGVLLGLPVLRLRGDYLAIVTLGLGEVIRVLATNLDRPINITNGSQGIKDIGRPPLFIEPVFQSLGITISRVQEYQLYFYFLVLIILGLTVFVVYRLNNSRIGRAWTAIREDETAAIAMGIPLVRMKLLAFAVGASFAGVMGVIFSALQTFINPPTFDLLRSIGILSMVILGGMGSIPGTMLGAVIVTLLDLQLLPRIASELAALQRRGVPIPAWFDPAQYQRLLFGLLLIIMMIFRPEGLLPEDRRRQELHHDEPEPAPETQQAASVTETAQSAEG
>NC_009523.1|WP_011957695.1|3750680_3751742_-|homoserine-dehydrogenase
MTHEHSTYRLALVGFGSVGRGLAEILSLHRRRLQERYGVDVRIVAVCTRRWCVYDPGGIDAAALLQSAASGAVGGWDCARAWSADEMIASVDADVLVEASPTDMTTGEPATGYIRAAMARGMHVITSNKGPIALHFAELRRLAQERGVLLGFEATVMAGTPALRLGWSDLAGCEIQEVRGIVNGTTNFILSAMERGMDYASALAEAQRLGYAEADPTGDVEGYDAAGKAAILANVLMDAHLTPMDVEREGITGITPDMVAAATAAGERWKLIARVWRDAQVVHAVVRPMRLRTDHPLAGVSGVANALTISTDLLGDVTIIGPGAGGVATGFAIISDLLALHRMRKNREPRTEN
>NC_009523.1|WP_011957696.1|3751861_3752425_+|GNAT-family-N-acetyltransferase
MKTQTDSQHFVRGHGTVTVVTRKGRKVRIRHIRPTDAGLLVDLFHHLSPETRRFRFFTALPDLPEDILWREARRYADFDEHKQAAFIALAREGGKDHAIGVVRLVLDKNDPDTAEFAIVLRDDYQREGLGTIMLDLLLQLALVRGIKRLRGISLADNEGIHRLIQKCGFPVTSHTSHGETTQIIHLE
>NC_009523.1|WP_011957697.1|3752618_3752975_+|NAD(P)H-quinone-oxidoreductase-subunit-3
MLANYAFIGVFFIGAIIFPIIPLAAAYFLGPKRPTPIKLDTYECGLEAIGDIRVQFKIQYYLYALAFVIFDIEVVFLYPWAVAYGQLGLFAFIAMAIFLIILIGGLVYEWKKGALEWV
>NC_009523.1|WP_011957698.1|3753286_3754093_+|NADH-quinone-oxidoreductase-subunit-B
MSDDREIQLEAEKHGVFLTTMQRFYNWGRRSSIWPLSFGLACCAIEMMATGLARFDLARFGAEMFRASPRQADLMIVAGTVTKKMAPQVVRLYNQMPEPRYVISMGACATSGGPFRDGYNVLRGIDLLIPVDVYIPGCPPRPEALLHALMTLQKQIDAQRLNQVRWYGKREAKEYPVPTFGKHGLEIDGKLIDPVGGLPLVSPYTSPTHGEMRSGMIEHPELVRHFPIMDETVERESPYKATGIAIEIAHNDLKRPAVEVDHAEDERR
>NC_009523.1|WP_041333807.1|3754070_3754640_+|NADH-quinone-oxidoreductase-subunit-C
MPKMSAAELKERLAQDLPGVLMPTRTRTQTSNGSEASVADGKAARPKRGEHAPVDLLATDDAVVYPERLPEVARYVRDVLGYELLSNITAVDYLADGVIEMVYHFFHLDGGPALVIKTRVPRDHPVVPSLTDEWPGANLQEREAFDLFGVVFTGHPNLTRIYMWDEFEGWPMRKDFPKQGDKYFGDSGE
>NC_009523.1|WP_011957700.1|3754671_3755796_+|NADH-quinone-oxidoreductase-subunit-D
MLQTQELQINIGPQHPSTHGVFRMIVTVDGETIVDLKPVFGYLHRNHEQLAEVSTYIQSMPYTDRLDYFNSMANNHALALAVEKLAGISVPQRAEYIRVLMVELTRILNHASAVGFLLNDMGAWQTPLMFGMREREKILDLFEMASGARMMCNYFRFGGVWRDLPPEFIPQLKELMQGLPSFFDEFERLLKENEILLSRTINVGVLPKEVAVSYSVTGPVLRASGIPYDVRRAEPYSVYDELDFDIPIGSVGDVYDRFLIRIEEMRQSYRILQQVIERLPDTTGGHINPAMANIGKQKALRPPPGDAYARIESPKGELGFYLVSDGSERPYRYKVRAPSFINLTPLGDMCRGHKVADVVVILGSIDIVMGEVDK
>NC_009523.1|WP_011957701.1|3755929_3757252_+|4Fe-4S-dicluster-domain-containing-protein
MITETEPETTETQTTRGKVYVIDRGRPKLRAGQGLLTGLDVVFRHFRDALTRKLEKPSQQTGVFTVQYPEERLKLPEAFRNFPILLYDDETGHELCTSCFQCQRICPPQVIHMTQARDPATGKAVPAVAEFLIEYDACMSCGLCAEVCPFDAIKMDHEFEFSTDVHGGLTINKAGLNRPISYYEKIAPTFWAEVKDGAMKKLQGNMKRRPDLIGVAPQMIDTIKAKRAEAAVAQAPAPAPSAPDSAPTDKAARLAAIRAKAAAKDAEAQPAPSDDSAPTDKAARLAAIRAANAARKDEAADVAQTSDTTPDDKAARLAAIRAANAAKKATAEGAPASASAAPAAHAAPTSDTPPAASSTPDDKAARLAAIRAANAAKKAAAEGAPASASAALPTHTAPTSDTPPAASSTPDDKSARLAAIRAANAAKKAAAQKQDGNDDQ
>NC_009523.1|WP_011957702.1|3757263_3758622_+|NADH-quinone-oxidoreductase-subunit-H
MTDILRSWIGSALPDWLIVLIAYLIVTTIVLFYAVGNFILMVWAERRVVARMQDRLGPNRVGPAGLLQPIADAVKMFTKEDIVPRNADRWVHLLAPVVSLAPVAMMLAVIPWGRGWEPIDLNVALLYIVAVSAVSGVGLMMAGWGSNNKFALLGAMRAVAQLVSYEIPAVTALLTVVVLAGGMSLLNLPHLQAGVPIMGATILCNDPAGCSPLLYTTITSFPGSPNEPVQALDLGLGWWVFTPVGLLGFVVFFIAALAEGERTPFDIPEADSEIVAGYMTEYSGMKFATFYIAQYILNFALAALAATAFLGGWQGPGVAALANMGGPWVHAAAALSAFYLLAKIWILFFVMIWLRGAFPRLRVDQLMDFAWKLLLPLALVNIVSASLMVSITQWTGAQWSGVVNLDGFASWQRQLIAVIVTAIINIAATYWILSINQRPAEQEWDEELVVAP
>NC_009523.1|WP_011957703.1|3758661_3759309_+|NADH-quinone-oxidoreductase-subunit-J
MNTLITILFLVFAVFILVAAIMTVTVKNIVHAALWLISSFFGVGALYLLMEAEFLGVAQVLIYVGAVSILILFAIMLTRDLEGSQNRQLTPRWWIALLVPAALFGLLIVPTVMTHAWQLPPPPPAGQPPSISGAQQIGTAFMREYLLPFEVAAILLLVAMIGAIVVAFEEREQRRRVLTLAEQVRLRRQRQQQVATLPEPAVSAVQPSEATGGET
>NC_009523.1|WP_011957704.1|3759363_3759690_+|NADH-quinone-oxidoreductase-subunit-NuoK
MPSMTEAVPLPWVLTLAGALFCVGLFGALSRRNTVGILLGIELMLNAVNINLVAFWRYLEPNVVAGQTFALFVITVAAAEAAIGLAMIIAIYRARQTVNADEVDSLRG

Crispr_ID: NC_009523_69

• CRISPR_ID: NC_009523_69
• CRISPR_location: 3752997-3753121
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_69

Consensus_repeat	Method
GTTGAACGTTGCACGTTGAACGTGGGACGACAAC	CRISPRCasFinder

spacers of NC_009523_69

>69.1|3753031|57|NC_009523|CRISPRCasFinder
CGACAACGTGTAGGGGCGCAGCGGCGCTGCGCCCGTACCGGGGGCGAGGCGCGAGAA

CRISPR arrays and Neighbor proteins around NC_009523_69

CRISPR arrays

The CRISPR arrays of NC_009523_69

>merge|NC_009523|69|3752997-3753121|CRISPRCasFinder
GTTGAAGGTTGAACGTTGCACGTTGAACGTGGGACGACAACGTGTAGGGGCGCAGCGGCGCTGCGCCCGTACCGGGGGCGAGGCGCGAGAAGTTGAAGGTTGCACGTTGAACGTGGGACGACAAC

>NC_009523|69|66|3752997-3753121|CRISPRCasFinder
GTTGAAGGTTGAACGTTGCACGTTGAACGTGGGA	CGACAACGTGTAGGGGCGCAGCGGCGCTGCGCCCGTACCGGGGGCGAGGCGCGAGAA
GTTGAAGGTTGCACGTTGAACGTGGGACGACAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957691.1|3736601_3738026_+|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl|CDD|273198
NC_009523.1|WP_041333807.1|3754070_3754640_+|NADH-quinone-oxidoreductase-subunit-C	unknown	unknown	gnl|CDD|376317
NC_009523.1|WP_011957693.1|3740281_3744946_+|glutamate-synthase-large-subunit	unknown	unknown	gnl|CDD|236968
NC_009523.1|WP_011957707.1|3763909_3765433_+|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl|CDD|235622
NC_009523.1|WP_011957696.1|3751861_3752425_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NC_009523.1|WP_011957704.1|3759363_3759690_+|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl|CDD|180218
NC_009523.1|WP_011957689.1|3732588_3735123_-|alanine-racemase	unknown	unknown	gnl|CDD|143481
NC_009523.1|WP_011957703.1|3758661_3759309_+|NADH-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl|CDD|235844
NC_009523.1|WP_011957694.1|3746272_3750154_+|PA14-domain-containing-protein	unknown	unknown	gnl|CDD|271325
NC_009523.1|WP_011957705.1|3759955_3762133_+|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl|CDD|235836
NC_009523.1|WP_011957702.1|3757263_3758622_+|NADH-quinone-oxidoreductase-subunit-H	unknown	unknown	gnl|CDD|376297
NC_009523.1|WP_011957698.1|3753286_3754093_+|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl|CDD|237822
NC_009523.1|WP_011957701.1|3755929_3757252_+|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|235637
NC_009523.1|WP_011957690.1|3735240_3736356_+|dipeptide-epimerase	unknown	unknown	gnl|CDD|239435
NC_009523.1|WP_011957700.1|3754671_3755796_+|NADH-quinone-oxidoreductase-subunit-D	unknown	unknown	gnl|CDD|180385
NC_009523.1|WP_011957706.1|3762198_3763884_+|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl|CDD|235622
NC_009523.1|WP_011957688.1|3732009_3732573_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957697.1|3752618_3752975_+|NAD(P)H-quinone-oxidoreductase-subunit-3	unknown	unknown	gnl|CDD|180638
NC_009523.1|WP_011957692.1|3738393_3739830_+|ammonium-transporter	unknown	unknown	gnl|CDD|273292
NC_009523.1|WP_011957695.1|3750680_3751742_-|homoserine-dehydrogenase	unknown	unknown	gnl|CDD|235763

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957691.1|3736601_3738026_+|type-I-glutamate--ammonia-ligase	gnl|CDD|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0
NC_009523.1|WP_041333807.1|3754070_3754640_+|NADH-quinone-oxidoreductase-subunit-C	gnl|CDD|376317	pfam00329, Complex1_30kDa, Respiratory-chain NADH dehydrogenase, 30 Kd subunit.	9.03257e-50
NC_009523.1|WP_011957693.1|3740281_3744946_+|glutamate-synthase-large-subunit	gnl|CDD|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NC_009523.1|WP_011957707.1|3763909_3765433_+|NADH-quinone-oxidoreductase-subunit-M	gnl|CDD|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	1.26002e-142
NC_009523.1|WP_011957696.1|3751861_3752425_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.19446e-13
NC_009523.1|WP_011957704.1|3759363_3759690_+|NADH-quinone-oxidoreductase-subunit-NuoK	gnl|CDD|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	7.79138e-36
NC_009523.1|WP_011957689.1|3732588_3735123_-|alanine-racemase	gnl|CDD|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	5.99516e-168
NC_009523.1|WP_011957703.1|3758661_3759309_+|NADH-quinone-oxidoreductase-subunit-J	gnl|CDD|235844	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J.	8.13137e-47
NC_009523.1|WP_011957694.1|3746272_3750154_+|PA14-domain-containing-protein	gnl|CDD|271325	cd14955, NHL_like_4, Uncharacterized NHL-repeat domain in bacterial and archaeal proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	8.91732e-122
NC_009523.1|WP_011957705.1|3759955_3762133_+|NADH-quinone-oxidoreductase-subunit-L	gnl|CDD|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NC_009523.1|WP_011957702.1|3757263_3758622_+|NADH-quinone-oxidoreductase-subunit-H	gnl|CDD|376297	pfam00146, NADHdh, NADH dehydrogenase.	9.43983e-118
NC_009523.1|WP_011957698.1|3753286_3754093_+|NADH-quinone-oxidoreductase-subunit-B	gnl|CDD|237822	PRK14819, PRK14819, NADH-quinone oxidoreductase subunit B.	0
NC_009523.1|WP_011957701.1|3755929_3757252_+|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	5.64089e-27
NC_009523.1|WP_011957690.1|3735240_3736356_+|dipeptide-epimerase	gnl|CDD|239435	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	2.2875e-105
NC_009523.1|WP_011957700.1|3754671_3755796_+|NADH-quinone-oxidoreductase-subunit-D	gnl|CDD|180385	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D.	0
NC_009523.1|WP_011957706.1|3762198_3763884_+|NADH-quinone-oxidoreductase-subunit-M	gnl|CDD|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	6.50906e-152
NC_009523.1|WP_011957697.1|3752618_3752975_+|NAD(P)H-quinone-oxidoreductase-subunit-3	gnl|CDD|180638	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated.	6.0505e-44
NC_009523.1|WP_011957692.1|3738393_3739830_+|ammonium-transporter	gnl|CDD|273292	TIGR00836, Ammonium_transporter, ammonium transporter. The Ammonium Transporter (Amt) Family (TC 2.A.49) All functionally characterized members of the Amt family are ammonia or ammonium uptake transporters. Some, but not others, also transport methylammonium. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf. [Transport and binding proteins, Cations and iron carrying compounds].	1.76434e-147
NC_009523.1|WP_011957695.1|3750680_3751742_-|homoserine-dehydrogenase	gnl|CDD|235763	PRK06270, PRK06270, homoserine dehydrogenase; Provisional.	1.72522e-151

Protein sequences

>NC_009523.1|WP_011957697.1|3752618_3752975_+|NAD(P)H-quinone-oxidoreductase-subunit-3
MLANYAFIGVFFIGAIIFPIIPLAAAYFLGPKRPTPIKLDTYECGLEAIGDIRVQFKIQYYLYALAFVIFDIEVVFLYPWAVAYGQLGLFAFIAMAIFLIILIGGLVYEWKKGALEWV
>NC_009523.1|WP_011957696.1|3751861_3752425_+|GNAT-family-N-acetyltransferase
MKTQTDSQHFVRGHGTVTVVTRKGRKVRIRHIRPTDAGLLVDLFHHLSPETRRFRFFTALPDLPEDILWREARRYADFDEHKQAAFIALAREGGKDHAIGVVRLVLDKNDPDTAEFAIVLRDDYQREGLGTIMLDLLLQLALVRGIKRLRGISLADNEGIHRLIQKCGFPVTSHTSHGETTQIIHLE
>NC_009523.1|WP_011957695.1|3750680_3751742_-|homoserine-dehydrogenase
MTHEHSTYRLALVGFGSVGRGLAEILSLHRRRLQERYGVDVRIVAVCTRRWCVYDPGGIDAAALLQSAASGAVGGWDCARAWSADEMIASVDADVLVEASPTDMTTGEPATGYIRAAMARGMHVITSNKGPIALHFAELRRLAQERGVLLGFEATVMAGTPALRLGWSDLAGCEIQEVRGIVNGTTNFILSAMERGMDYASALAEAQRLGYAEADPTGDVEGYDAAGKAAILANVLMDAHLTPMDVEREGITGITPDMVAAATAAGERWKLIARVWRDAQVVHAVVRPMRLRTDHPLAGVSGVANALTISTDLLGDVTIIGPGAGGVATGFAIISDLLALHRMRKNREPRTEN
>NC_009523.1|WP_011957694.1|3746272_3750154_+|PA14-domain-containing-protein
MHLRTLIAVVCALSLVMTSLAVTLVTSSAGEAALAQQTQPYRVFQFAVGAQAPVGQFNNPSGVAVAPDGTVYVADSDNHRIQRFSAAGELLGAWGSPGTGDGQFSSPRSVAVAPDGTVYVADTGNHRIQRFSAIGTFLGTWGSAGLLIDGQFWYPSDVAVTSDGTVYVVDDHRIQRFSATGVFLGAWGWRPGKRVAVVPDNTVYVADSDNHRIRRFSAIGAFLGEWGSRGSGEGQFNTPSDVAVAPDGTVYVADYWNHRIQRFSADGTFLGAWGSSGSGNGQFVGHLSVEVAPNNTVYVADSFRIQRFSATGTFLGAWGSRGSDQGQFSSPSGAAVASDGTVYVADSNNHRIQRFSADGTFLGAWGAEGSGDGQFVYPRSVAVASDGTVYVADSNNHRIQRFSATGTFLGKWGSEGSSDGQFIYPLNVAVALDGTVYVADVAKGSIQRFSATGAFIGTWGSQEGAGNLHFYPAGLAVASNGVVYVANANKSRIERFSATGTFLDAWGSLGINDGQLWSPRGIAVAPDGTIYVADTGNGRIQHFSATGIFLGSWDSWSIFDRQLLQSPLESPEDVAVAPDGKVYVVDNGNHRIQVFGTDYPNAWRGEFFANDWLTGPVLHVENVPDLFLNRSWVGQPAATIPADHFTSRWLRYVNFPTTGRYRFTIRADDGVRFWIDDRLVVESWQPQLLTREVTVELSAGYHKLLVEHWDRDGGATLALEWARADNTTPTPTATPSPTPTPSPTLTPSPTATPSPTPTPPIDSAIGVDLTIGLYRNPNSQERAVYEEMIRYLADALFEVSNGAHKLRTVRIYPNNTSAKDIIWVERCWPSAHISGYGRAQHGLRIQMCDIFDFGSGSYNYLQNRRAWENAGYTIAHEMGHYLYSLYDEYRNDRRTCDWTNDPGAPCRDDIPVSPSVMHSQWNATGGQYSWLNFSSAANYSTRTAQYRVYRASGWETLVRRPELDPRDGVLAYYPRRLYHPELRNVAPASGQLPRIDLITGHQARSMLQIIWEPTSGASLASADITASLFALEGNNVTYPQPVRLIAVLQRTLPIAGATVRGEVVLPNGQTQSLTFRDDGVAPDALADDGQYSALFVPTQNGQHQYRVTFTNPTQAAVEVYNGLHLAPPPPGYQPDDSLLAPVPVVENFTVSAQTTVVVSGVRSDDHGNDPGTASLLNTDNLDQWGHIERGGDRDLFRITVAQDMTIVVRVTDLAAGMQPRLRLLAGDGTTPISALSLAKNYPALVYTARAGSVIYAEVSHVDPAASGGVYRISAGSPIVSDGLNQVHIPIVIR
>NC_009523.1|WP_011957693.1|3740281_3744946_+|glutamate-synthase-large-subunit
MNQLKNLKQRGLYDPRFERDACGIGFVARLSGEPDHAILAYALMAVGRMAHRGGVAADGKSGDGAGVLTQIPRAFFARELAIRGIRYPVDDLAVGMFFLPQNEGHRNTARSVVEQVLAQYGMALLAWRPVPVNPHALGASARETCPVIEQALIARPPHNHTAPNAYERALYLARRTIEAEARAHHLEGFSIPSLSSRTLIYKGLLVAPALPDFYEDLRDPLYETAIALYHQRYSTNTFPSWERAQPFRMLSHNGEINTLRGNIIWMQAREAEWRRAAMEVEQPSLIEAAIDGDPLAMALSAATIGPVVDTSGSDSAMLDNVLELLVMGGRDIRHSLTMLVPEAWERVHDMEPARRAFYQYHAGLMEPWDGPAALAFCDGQVVGLALDRNGLRPARYLLTDDGLVICGSEVGAVVIDESRIVRKGKVGPGQMIAADLRTGRFEENDEIRSTLAARRPYAEWLKRHMRVLAPAGAPRVSEPDEPESHASRESKSALLGELQRAFGYTAEELAVVLKPMLRDGQEPVGSMGDDTPTAVLADRPRPLYNYFKQRFAEVTNPPIDPIREELVMSLSFSLGRRGHLLLEKPEHAHLLRLASPVLNNEHLAMLRDLRDPAFATATLNATFVADDGVQGMLSALDRLCREAEAAIAADKVILIISDRGVDERHAPIPALLALGAVHQHLIRVGLRTSVSLVVESGEPREVHHLACLVGMGAEAVNPYLALATVRALAVERDEVRGKAAETHDRRAAGELADEAEQNYIHALEKGLLKVMSKMGISTVDSYCGAQIFEIVGLAKEVTERCFAGVPSHLGGYGFRKLAADVLEHHDAAFSNRLPLLAGRSTLPHPGYYKFKKDGEYHAFSPAVVHALQRAANGGSYADYLAYSKLVHDRPPVELRDLLEIVPPDEREAGPAAPIPVDDVEPIEAIVRRFSTAAMSHGSTSAEAHETLSIAMNRLGGMSNSGEGGEDPARYNNERNSTIKQVASGRFGVTPAYLASALELQIKMAQGSKPGEGGQIPGIKVSEEIARIRHTTPGVALISPPPHHDIYSIEDLAQLIYDLKQVNPRAAVSVKLVAEAGVGTIAAGVAKGGADVIHISGHSGGTGASPLSSIKNAGINWELGLAETQQTLVLNGLRGRVRLRVDGGFKTGRDVVMAALLGADEFSFGTAALIAEGCVMARTCHTNNCPVGVATQRPDLRARFPGKPEHVVNFFRHVAQEVREILASIGARSLNDIIGRTDLLRQVRRGHAGADALDLSALLARFDRPGDPIRNVQPWNGMIEIGALNRRLIEDAACAIDHQLHVELHYPITNVDRTVGATLSGEIGRRFGEAGLPEGMITVSFRGSAGQSFGAFLAPGMRLLLDGECNDYVGKGMAGGEIVVRPLPQARYPWHESTIIGNTCLYGATGGTLFAAGRAGERFAVRNSGAVAVVEGVGDHGCEYMTGGVVLVIGPTGRNFAAGMTGGMAYVYDENGAFPSRCNTEMVTLTMLDPADEDNVRALLVRHMELTGSPHAASLLERWEVARGAFWRVQPRGMETVRLPKALLRVRERTLGAHR
>NC_009523.1|WP_011957692.1|3738393_3739830_+|ammonium-transporter
MVRRRTKLMLGIGALAGLLIGTTGTSFAQEIDPAIAEMGVVTDTMWLLIAAFLVFFMQAGFALVEAGSTQSKNMINIMFKNFMDFCIAALAFWMIGWGIAYGATVGGFFGTDQFFLGDVREAGSVPTLALWLFQVVFAGTAATIVSGAMAERTKFVAYLIYSLVISILIYPVVVHWVWSGAGWLNDYDPTTTGDWGFTDFAGSTVVHSVGGWAALMGAWLLGPRLGRYGPDGKPREIPGHSAALAGLGVFILWLGWYGFNPGSQLAFKTQDDADAIALVAVTTTLAAAAGAVGAMITSWIKSGKPELGASLNGVLSGLVAITAGCAYMRPIDAVIVGLVAGPLYVISMKWLEALKIDDPVGAVPVHLVNGVWGTLAVGLFATIEGNTGTVGLFAGGGPQLLIAQIVGVLAIGVWSALTSFLLFFIIKRTIGLRVSPEEEELGLDIGEHGTVAYPDIHKMPEPETIRTITGKPASSTAE
>NC_009523.1|WP_011957691.1|3736601_3738026_+|type-I-glutamate--ammonia-ligase
MGMTPKDVLALIKEHDIKMVDVRFTDMPGTWQHFSLPASMLSEDDFVHGLGFDGSSIRGFQAINESDMLVVPDPDTAFIDPMLKIPTLALICDIRDPLTGENYSRDPRYIAKKAEEYLRSTGIADTAYFGPEAEFFLFSDVRFDQGSHFGYYFLDSDEGIWNSGADRGGKNLGYRPRYKEGYFPCPPLDTLQDVRSQITLNMMAAGIEVEVHHHEVATAGQCEIDMRFDSLLRMADKLVKYKYIVKNTARQFGLTATFMPKPLFGDNGSGMHCHQSLWKEGQPLFYDPKGYALLSDTARWYIGGILTHAPALLAICAPTTNSYRRLVPGFEAPINLVYSQRNRSAAIRIPTYSDSPKARRIEFRAPDPTCNPYLAFSAMLMAGIDGIKNRIEPPPPLDVDIYELTAEEKAHIRGTPGSLAESLDALEADHDFLLAGGVFTPDVIETYLDYKRSRELIQVAIRPHPYEFFMYFDA
>NC_009523.1|WP_011957690.1|3735240_3736356_+|dipeptide-epimerase
MTAPTTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGTRGYGEAAPFPAFNGETQDMAHAAILAARSLVEGADVREWRRIALALPALPGMTGSARCAIETAILDALTRRARLPLWAFFGGAATSLETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAPTARLILDGNCGYTAPDALRLLDMLGVHGIVPALFEQPVAKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMKCGIVEALDIAAIARTAGLHLMIGGMVESLLAMTVSACFAAGQGGFRFVDLDTPLFLAENPFDGGMTYHGGTIDLTLIEAGHGVTPRSPAL
>NC_009523.1|WP_011957689.1|3732588_3735123_-|alanine-racemase
MIDLDDLLAAGGRLASPVYARQFSGFSYDSRLTAAGELFLALRTPRGDGHAYIADALAAGATGVICEKPPADLSNTTMIVTDDPALLAARWAAARLRQVAPRVIGVTGSVGKTSATRAIAAVLSGLAPTFRSRRSFNSLIGLPVSLARLQDDHRFAVLEYGTAYPGELHRLTALFPPHVAVVTSAAPMRLSAFGSVADLVREYGALVAALPVDGWAVVNGDDPALAGLCDTTRARVLTFGTGASCDLRGEAPQYALNGTRMRVCYRGESVDTVIPLIGEPAVGAALAAVGVALVCGMTLERAAERLALVEPPAGRLRPHLARSSAIVIDDTVGAEPSAMLAALRTLAILPAQRRIAVLGDLPADSSIPGEQNDTYAAIGRLAARTADLLIWKGDAGTHVMRAVQRVRTGMSATLVHTIAGALEALPPDLGAGDLVLVCGGATARLERLVAALIDPSVNASQALVRQDAGWRATRIADPDRPTWVRIDLDAIRDNVRTLRSIAGVPVMAVLKADAYGHGAVRAARAALAGGAVALAVATLGEARTLREAGIGAPILALGYTPPWQVAQAARLGVAITVFDYDAARACAAVAETGVPVPVHVEVDTGMARTGLSVDELGPFLRSLAGLPGVHVEGLYTHFADADAADPGAAEAQLRRFRSALDAVTGAGLRPPVVHAANSAAMLRLPGARFDMVRPGIACYGLAPSPWVTLPAALRPALSFHSEVAQVRDLPPGTPVSYGGTFVTRRHSRIATIPVGYADGMRRAPPWREVLVRGRRAPVVGRICMDYAMIDVTDHAEVRRGDLVTLIGVQGDACITVAEVASWLGTISYDVVATILPRVPREVSE
>NC_009523.1|WP_011957688.1|3732009_3732573_+|hypothetical-protein
MRLRLLLAGVGLLLIGTLVMVFALVNWTGASGVRDEQMHAERVWYAQSRHHYRIVIRQRTRTGVCEQDLEIRNDRVQTVYLNQCAQPPIWTVPRLFSWVRQLGQPAGLCYPSSLQCTCRVSTHLQVLFDPQSGYPRQVLYEWGLRPNWESMDYWQSLVLGTDRVDCARRTRGGGVVEITVVSFMPLP
>NC_009523.1|WP_011957698.1|3753286_3754093_+|NADH-quinone-oxidoreductase-subunit-B
MSDDREIQLEAEKHGVFLTTMQRFYNWGRRSSIWPLSFGLACCAIEMMATGLARFDLARFGAEMFRASPRQADLMIVAGTVTKKMAPQVVRLYNQMPEPRYVISMGACATSGGPFRDGYNVLRGIDLLIPVDVYIPGCPPRPEALLHALMTLQKQIDAQRLNQVRWYGKREAKEYPVPTFGKHGLEIDGKLIDPVGGLPLVSPYTSPTHGEMRSGMIEHPELVRHFPIMDETVERESPYKATGIAIEIAHNDLKRPAVEVDHAEDERR
>NC_009523.1|WP_041333807.1|3754070_3754640_+|NADH-quinone-oxidoreductase-subunit-C
MPKMSAAELKERLAQDLPGVLMPTRTRTQTSNGSEASVADGKAARPKRGEHAPVDLLATDDAVVYPERLPEVARYVRDVLGYELLSNITAVDYLADGVIEMVYHFFHLDGGPALVIKTRVPRDHPVVPSLTDEWPGANLQEREAFDLFGVVFTGHPNLTRIYMWDEFEGWPMRKDFPKQGDKYFGDSGE
>NC_009523.1|WP_011957700.1|3754671_3755796_+|NADH-quinone-oxidoreductase-subunit-D
MLQTQELQINIGPQHPSTHGVFRMIVTVDGETIVDLKPVFGYLHRNHEQLAEVSTYIQSMPYTDRLDYFNSMANNHALALAVEKLAGISVPQRAEYIRVLMVELTRILNHASAVGFLLNDMGAWQTPLMFGMREREKILDLFEMASGARMMCNYFRFGGVWRDLPPEFIPQLKELMQGLPSFFDEFERLLKENEILLSRTINVGVLPKEVAVSYSVTGPVLRASGIPYDVRRAEPYSVYDELDFDIPIGSVGDVYDRFLIRIEEMRQSYRILQQVIERLPDTTGGHINPAMANIGKQKALRPPPGDAYARIESPKGELGFYLVSDGSERPYRYKVRAPSFINLTPLGDMCRGHKVADVVVILGSIDIVMGEVDK
>NC_009523.1|WP_011957701.1|3755929_3757252_+|4Fe-4S-dicluster-domain-containing-protein
MITETEPETTETQTTRGKVYVIDRGRPKLRAGQGLLTGLDVVFRHFRDALTRKLEKPSQQTGVFTVQYPEERLKLPEAFRNFPILLYDDETGHELCTSCFQCQRICPPQVIHMTQARDPATGKAVPAVAEFLIEYDACMSCGLCAEVCPFDAIKMDHEFEFSTDVHGGLTINKAGLNRPISYYEKIAPTFWAEVKDGAMKKLQGNMKRRPDLIGVAPQMIDTIKAKRAEAAVAQAPAPAPSAPDSAPTDKAARLAAIRAKAAAKDAEAQPAPSDDSAPTDKAARLAAIRAANAARKDEAADVAQTSDTTPDDKAARLAAIRAANAAKKATAEGAPASASAAPAAHAAPTSDTPPAASSTPDDKAARLAAIRAANAAKKAAAEGAPASASAALPTHTAPTSDTPPAASSTPDDKSARLAAIRAANAAKKAAAQKQDGNDDQ
>NC_009523.1|WP_011957702.1|3757263_3758622_+|NADH-quinone-oxidoreductase-subunit-H
MTDILRSWIGSALPDWLIVLIAYLIVTTIVLFYAVGNFILMVWAERRVVARMQDRLGPNRVGPAGLLQPIADAVKMFTKEDIVPRNADRWVHLLAPVVSLAPVAMMLAVIPWGRGWEPIDLNVALLYIVAVSAVSGVGLMMAGWGSNNKFALLGAMRAVAQLVSYEIPAVTALLTVVVLAGGMSLLNLPHLQAGVPIMGATILCNDPAGCSPLLYTTITSFPGSPNEPVQALDLGLGWWVFTPVGLLGFVVFFIAALAEGERTPFDIPEADSEIVAGYMTEYSGMKFATFYIAQYILNFALAALAATAFLGGWQGPGVAALANMGGPWVHAAAALSAFYLLAKIWILFFVMIWLRGAFPRLRVDQLMDFAWKLLLPLALVNIVSASLMVSITQWTGAQWSGVVNLDGFASWQRQLIAVIVTAIINIAATYWILSINQRPAEQEWDEELVVAP
>NC_009523.1|WP_011957703.1|3758661_3759309_+|NADH-quinone-oxidoreductase-subunit-J
MNTLITILFLVFAVFILVAAIMTVTVKNIVHAALWLISSFFGVGALYLLMEAEFLGVAQVLIYVGAVSILILFAIMLTRDLEGSQNRQLTPRWWIALLVPAALFGLLIVPTVMTHAWQLPPPPPAGQPPSISGAQQIGTAFMREYLLPFEVAAILLLVAMIGAIVVAFEEREQRRRVLTLAEQVRLRRQRQQQVATLPEPAVSAVQPSEATGGET
>NC_009523.1|WP_011957704.1|3759363_3759690_+|NADH-quinone-oxidoreductase-subunit-NuoK
MPSMTEAVPLPWVLTLAGALFCVGLFGALSRRNTVGILLGIELMLNAVNINLVAFWRYLEPNVVAGQTFALFVITVAAAEAAIGLAMIIAIYRARQTVNADEVDSLRG
>NC_009523.1|WP_011957705.1|3759955_3762133_+|NADH-quinone-oxidoreductase-subunit-L
MGWFLQNAWLIPLLPLIGFAVITLTPIQRNKQASAWLATLLMVGATIIALGTAVEVASGVKIEPDGAVAEPTHATHTAAPAGEKAGHGFEWRDPNIVRTVRWAPSGGDIPFTMGYIIDPAVAAMLVMVTITATCIHLFSVGYMAHDPRQARFFSFISLFTAAMLAMVMASNLLLFFMAWEIMGLCSYLLIGFWYDKNYADPNQITPRQAAIKAFITTRIGDVLLMIGLAWLWTEAGTLELGTGPGQVFNPELLERLAATVTGIGISAATGIALLIFCGTIGKSAQFPLHVWLPDAMEGPTPVSALIHAATMVSAGVFLTARTFPIFQVSDALPIVATIGAFTALFAALIAVGQFDIKRILAYSTLSQLGFMVAALGIGGWVAAMFHLLTHAFFKALLFLGSGSVIHGMEAAVGHDSNTAQDIRNMGGLRRLMPVTFFTYMAGFLALAGFPGFAGFWSKDEILADAFRANTLVWIVLSLASLLTAFYMTRQVMLVFFGSFRGHHPRQPAYAFAHHADHHHEAHDPHESPWTMTVPLVILALFAVFAGLVNLPFDGFHHLAEFFGQEAGKLNLLVMGISSAIALVGIALGWLVYRQAFTASAEEADPLERMVPGVFTMLNRKFYIDELYAATFGALTTILARVWTWFDAQVLDRLVIDTGRFTRFLGQVNFIIDDAVLNDGADLVATGTQVAGDRTRRTTTGKIQDYVALAFAGAVVLGVLYLYVVR
>NC_009523.1|WP_011957706.1|3762198_3763884_+|NADH-quinone-oxidoreductase-subunit-M
MTYLAYASTPWLTLLILSPLVGLALTALAGALRLDDRTAMIGATAWSTVPLALAIIVWVGFNPNATADGQGVVQFVEKIPWVQAIRVDYFVGVDGISMPLVILTAAMTPVAMLASFSVTQRVKLYLALMFLLETAMLGYFLALNFFFFFIFWEFSLVPAYFLIQGWGRRHTTDADPEQRRRDAALKFFVYTMAGSIGMLLLFQFFYVATAAAGIPTFDLITLARLGQGLTVERAALDPVNLTLQEIIFNYVEQLGIADVLGRYPLLYTSIAFWAIFIAFAIKLGIWPFHTWLPDAYSEAPPAASILLAAVMSKMGAYGMLRLMLPLVPDAAQYFGPAIGALALIGVVAGAFGALGQVGGDLKRLIAYTSVNHMGYVGLAIAAAATVGAADVATRATAINGALFQMVAHGLSTGALFLMAGMLAERTGSDDMRSLAGLRTTMPVFAGAMGVATFANLGLPGLAGFVGEFFIFRGVWASLPLFALLATIGLVVTALALLRMYGQMFHGQTNERSAMPDMRLAGREFLAVAPLLIALLILGIYPAPIMDLSNQTATALARVFLP
>NC_009523.1|WP_011957707.1|3763909_3765433_+|NADH-quinone-oxidoreductase-subunit-M
MNLIDLPTNVPWLSLIWLSLVAPTLIIALLKPEQKREIRIVGAVFSFISLALTLLVYLAYDYRSPQQFQFLEEVPWLPELGINYILGVDGVSLPMLLLNGLVIFTGALISWNIEERTREYWALLLLLAAGVYGVFVSLDLFLLFIFYELAVLPMYLLIGIWGSTRKEYGAMKLTLYLMGGSAFIILGMVAVYYSGTLRTFDMRLLAQSALFSRDVQIVFFVPLFLGFAVLAGMFPFHTWSPTGHVAAPTAVSMLHAGVLMKLGAYGCLRVAMWIFPEGASYWLLPIAIATLINAVYGASIAMTQRDFKFMIGYSSVSHMGLTLMGLAAANTIGITGAVLQMFAHGVMTALFFAVVGRMVYDRTHTRQFPELGGLFNVMPFAAIVFIIAGLSSMGMPGLAGFWAEFNIFMGMWQRFPLIAVLAGISIPITAGYILLAVYRVFFGELKNPEFRRLPGLTTPEYVAGAILAAVLIVSGIYPAYLTEPIEASVRPIAEALARAGALGMAGR

Crispr_ID: NC_009523_70

• CRISPR_ID: NC_009523_70
• CRISPR_location: 3781897-3786321
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 59 spacers
• Cas_protein_info: WYL,cas2,cas1,RT,csx15

Consensus repeat of NC_009523_70

Consensus_repeat	Method
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CRT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CRISPRCasFinder
GAAGCGACCACTGCCCCGCAATGAAGGGGATTGA	PILER-CR

spacers of NC_009523_70

>70.1|3781934|37|NC_009523|CRT
TCTCTCCCCTCACTCCTCTTCCCTCACTCCTCGCACG
>70.2|3782008|38|NC_009523|CRT,CRISPRCasFinder
CGGGGGGCAAGGAGGAAAGAAAAATGTTCTTTGAATTT
>70.3|3782083|35|NC_009523|CRT,CRISPRCasFinder
GCTTGCCTGGCGCAGGCGCCGGACGACGCGGACGT
>70.4|3782155|37|NC_009523|CRT,CRISPRCasFinder
TGTTTGGGGGGTGGTGGAGTGGAGGTACGACCTCCAC
>70.5|3782229|36|NC_009523|CRT,CRISPRCasFinder
TTATCTTGGCGGACCGAAGGACGATGACGACGACGA
>70.6|3782302|37|NC_009523|CRT,CRISPRCasFinder
TGATAAACAGTTGGACCCGAGTGCGTATCGTTTATAA
>70.7|3782376|38|NC_009523|CRT,CRISPRCasFinder
AAGGGGACTAGTAGTCCCCGCCCCCCGCCGCGCTCGCC
>70.8|3782451|38|NC_009523|CRT,CRISPRCasFinder
CTTTCCAGACGCCGTCCTTGGGGGACGATTTTAAACTG
>70.9|3782526|38|NC_009523|CRT,CRISPRCasFinder
GGTCTCCCAGGCGATGGACAATCTCACGCCCTTCAAGG
>70.10|3782601|37|NC_009523|CRT,CRISPRCasFinder
CCATCGCCTGGGGGGTCCGGGTCTCCCCCAACAAGAA
>70.11|3782675|38|NC_009523|CRT,CRISPRCasFinder
CTATTATGGGATTCAAGTCTAAACGACTGGCCCATCTT
>70.12|3782750|35|NC_009523|CRT,CRISPRCasFinder
GGAAACCGTGGGTCCGAGGTCGTGGGAACCGTCAT
>70.13|3782822|36|NC_009523|CRT,CRISPRCasFinder
CAAGCGCGGGCACAGAAGGAGATCGAATTGCGCAAG
>70.14|3782895|34|NC_009523|CRT,CRISPRCasFinder
CTGGGGCAAGGAGGAAAAATGGAAGCTCTGTTTT
>70.15|3782966|38|NC_009523|CRT,CRISPRCasFinder
GCCGCGCCGCCCGCCAGAGGAGGTATGAGATGAGTCAT
>70.16|3783041|39|NC_009523|CRT,CRISPRCasFinder
CGCGCAACGAAAGGAGAACATATGAACCCGAATATTCAT
>70.17|3783117|40|NC_009523|CRT,CRISPRCasFinder
TCCGCTTACAAGGCTCTGGGTACGCCAGATGAGCCTACGT
>70.18|3783194|40|NC_009523|CRT,CRISPRCasFinder
ACTCGATATTACAGGTCGTATTGCAGGGTTTGCCAAGTTT
>70.19|3783271|38|NC_009523|CRT,CRISPRCasFinder
CCCTCGGGATGCTTGCTCTCCTGGCAGGAGGCCTTTTT
>70.20|3783346|37|NC_009523|CRT,CRISPRCasFinder
CTGCAGACCATAGTATCGTTAGTAACGGGGGTTTTTT
>70.21|3783420|38|NC_009523|CRT,CRISPRCasFinder
CCTTTTTAGCCCCTTTTGTGCCGGTGATTGTTTTCCTT
>70.22|3783495|36|NC_009523|CRT,CRISPRCasFinder
GATTTCCGGAAATTTCGGATGTTATTTCCTTTCAAG
>70.23|3783568|35|NC_009523|CRT,CRISPRCasFinder
AATCTTGGGGCGTGTACTTTTTGTACACACTGTAC
>70.24|3783640|37|NC_009523|CRT,CRISPRCasFinder
ATGGACGACAACCAGTCAAACCAGTCGCCGGACGAGC
>70.25|3783714|37|NC_009523|CRT,CRISPRCasFinder
GACGCGGGAGACTGAACTTCCGCTCGCAATGGTGCGG
>70.26|3783788|38|NC_009523|CRT,CRISPRCasFinder
GGGCGCTGTCACAACGCATTCCCTGGGAGGGGGTTTCC
>70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder
TATGGGCGACCGCCGTCCGCGCCGCCGCCGTCGATGA
>70.28|3783937|37|NC_009523|CRT,CRISPRCasFinder
TCGACGTTCACCGGAACGTGGACGAGAAGACACTCGC
>70.29|3784011|37|NC_009523|CRT,CRISPRCasFinder
TAGTTCCCTATGTGGTAGCGTCTTTTATGTTCTTCAT
>70.30|3784085|37|NC_009523|CRT,CRISPRCasFinder
AGGAACGCATGATCGAACCGACCACCTCACCGACCAC
>70.31|3784159|36|NC_009523|CRT,CRISPRCasFinder
ATGTCCGCCGGTTCATCTGGCTGGACAACTACGGGT
>70.32|3784232|37|NC_009523|CRT,CRISPRCasFinder
GGCTGGACGATCTAGTTTTTATACTAGATGTTGCAGT
>70.33|3784306|38|NC_009523|CRT,CRISPRCasFinder
CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGA
>70.34|3784381|37|NC_009523|CRT,CRISPRCasFinder
GGCACGTCGCGGGGTTCGTGACCAACGTGCGGCTCTC
>70.35|3784455|39|NC_009523|CRT,CRISPRCasFinder
CGTCCGCCTCACGATCCGCCCGCTTGGGCGGTTCGGCGA
>70.36|3784531|40|NC_009523|CRT,CRISPRCasFinder
TCCGTCCAGGTCGCATCCAGCGCCAGCAGCGCCTGGCGCC
>70.37|3784608|37|NC_009523|CRT,CRISPRCasFinder
CTGCGGGAGGCGTTCCCGCGCCCCGGCGCCGCGCTGT
>70.38|3784682|37|NC_009523|CRT,CRISPRCasFinder
GATTATCGACGCGATCGCCCCGGTCGCAGATGTGATT
>70.39|3784756|38|NC_009523|CRT,CRISPRCasFinder
GGAACGCCCCCCTCCCCCGAAGGGGGGAGGGCGATCCG
>70.40|3784831|37|NC_009523|CRT,CRISPRCasFinder
TGGAATCCGCACCGACACGCTCGATCTGAGCGTGCCG
>70.41|3784905|36|NC_009523|CRT,CRISPRCasFinder
CCTCGCCATGCGCCGCGCCGACGGGCAGGGCATGCT
>70.42|3784978|36|NC_009523|CRT,CRISPRCasFinder
CCTCCAAACTGAGTAAGTTTGGCTCTCCTGACCCAC
>70.43|3785051|38|NC_009523|CRT,CRISPRCasFinder
TCCGGGAGCAGGCCGAGCAGCTTCGAAAGGGGCTGGAG
>70.44|3785126|37|NC_009523|CRT,CRISPRCasFinder
GGGACACCTACCGGGCGGCGCTCGATGCAGCTCTCGA
>70.45|3785200|38|NC_009523|CRT,CRISPRCasFinder
CTCGAGGCGCGGGCCGCGCGCCTTGGCGGCGAGCTCGT
>70.46|3785275|38|NC_009523|CRT,CRISPRCasFinder
TTTAGCAGTTCGCCCATCTCCGTTTTTTAATCTGGAAT
>70.47|3785350|37|NC_009523|CRT,CRISPRCasFinder
AAGCGCGCGCGCGGCGGGACGCCGAACGGCGCGCTGC
>70.48|3785424|37|NC_009523|CRT,CRISPRCasFinder
CGACCTCGCGGATTCCCGCGCCGACGCGTATCGGAAC
>70.49|3785498|37|NC_009523|CRT,CRISPRCasFinder
CAGCGCGAAGTTGGAGGAGAGGCGCAGTATGAGTCTA
>70.50|3785572|38|NC_009523|CRT,CRISPRCasFinder
CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGA
>70.51|3785647|40|NC_009523|CRT,CRISPRCasFinder
GGAGGTACGCGGCGTAGCATACGCAGCGTGCCTTGACGAG
>70.52|3785724|39|NC_009523|CRT,CRISPRCasFinder
TCGCGTGGCGGAGCCGCACCCGGAGCGCCAGCGTATCTC
>70.53|3785800|37|NC_009523|CRT,CRISPRCasFinder
TCACGAGATCCGGAGGAAGCTGGAGAAATGCCAGTTC
>70.54|3785874|35|NC_009523|CRT,CRISPRCasFinder
TCGGGAACCAGCAGTGCGTCGACCGCCATCGGGTC
>70.55|3785946|39|NC_009523|CRT,CRISPRCasFinder
TCCCCCCGAAGGGGGGGGGCGAGCCGTTTGCATTCCCGC
>70.56|3786022|39|NC_009523|CRT,CRISPRCasFinder
TCATCGTTTCCATTTCCTTTCTCCTTGCCCACCCGCCGT
>70.57|3786098|36|NC_009523|CRT,CRISPRCasFinder
TCGAAAAATGAGTACCATCTTTGTGGTGGCGGCAGC
>70.58|3786171|39|NC_009523|CRT,CRISPRCasFinder
TCGCACAAAGTGGGGCGCGGATTACCTGATAACAGCGGA
>70.59|3786247|38|NC_009523|CRT,CRISPRCasFinder
TCGATCCAATCCGGATCGGTCGGGGGAGACCCCGCCCC
>70.60|3782008|41|NC_009523|PILER-CR
CGGGGGGCAAGGAGGAAAGAAAAATGTTCTTTGAATTTGTT
>70.61|3782083|38|NC_009523|PILER-CR
GCTTGCCTGGCGCAGGCGCCGGACGACGCGGACGTGTC
>70.62|3782155|40|NC_009523|PILER-CR
TGTTTGGGGGGTGGTGGAGTGGAGGTACGACCTCCACGTC
>70.63|3782229|39|NC_009523|PILER-CR
TTATCTTGGCGGACCGAAGGACGATGACGACGACGAGTC
>70.64|3782302|40|NC_009523|PILER-CR
TGATAAACAGTTGGACCCGAGTGCGTATCGTTTATAAGTC
>70.65|3782376|41|NC_009523|PILER-CR
AAGGGGACTAGTAGTCCCCGCCCCCCGCCGCGCTCGCCGTC
>70.66|3782451|41|NC_009523|PILER-CR
CTTTCCAGACGCCGTCCTTGGGGGACGATTTTAAACTGGTT
>70.67|3782526|41|NC_009523|PILER-CR
GGTCTCCCAGGCGATGGACAATCTCACGCCCTTCAAGGGTT
>70.68|3782601|40|NC_009523|PILER-CR
CCATCGCCTGGGGGGTCCGGGTCTCCCCCAACAAGAAGTT
>70.69|3782675|41|NC_009523|PILER-CR
CTATTATGGGATTCAAGTCTAAACGACTGGCCCATCTTGTT
>70.70|3782750|38|NC_009523|PILER-CR
GGAAACCGTGGGTCCGAGGTCGTGGGAACCGTCATGTT
>70.71|3782822|39|NC_009523|PILER-CR
CAAGCGCGGGCACAGAAGGAGATCGAATTGCGCAAGGTT
>70.72|3782895|37|NC_009523|PILER-CR
CTGGGGCAAGGAGGAAAAATGGAAGCTCTGTTTTGTT
>70.73|3782966|41|NC_009523|PILER-CR
GCCGCGCCGCCCGCCAGAGGAGGTATGAGATGAGTCATGTT
>70.74|3783041|42|NC_009523|PILER-CR
CGCGCAACGAAAGGAGAACATATGAACCCGAATATTCATGTT
>70.75|3783117|43|NC_009523|PILER-CR
TCCGCTTACAAGGCTCTGGGTACGCCAGATGAGCCTACGTGTT
>70.76|3783194|43|NC_009523|PILER-CR
ACTCGATATTACAGGTCGTATTGCAGGGTTTGCCAAGTTTGTT
>70.77|3783271|41|NC_009523|PILER-CR
CCCTCGGGATGCTTGCTCTCCTGGCAGGAGGCCTTTTTGTT
>70.78|3783346|40|NC_009523|PILER-CR
CTGCAGACCATAGTATCGTTAGTAACGGGGGTTTTTTGTT
>70.79|3783420|41|NC_009523|PILER-CR
CCTTTTTAGCCCCTTTTGTGCCGGTGATTGTTTTCCTTGTT
>70.80|3783495|39|NC_009523|PILER-CR
GATTTCCGGAAATTTCGGATGTTATTTCCTTTCAAGGTT
>70.81|3783568|38|NC_009523|PILER-CR
AATCTTGGGGCGTGTACTTTTTGTACACACTGTACGTT
>70.82|3783640|40|NC_009523|PILER-CR
ATGGACGACAACCAGTCAAACCAGTCGCCGGACGAGCGTT
>70.83|3783714|40|NC_009523|PILER-CR
GACGCGGGAGACTGAACTTCCGCTCGCAATGGTGCGGGTT
>70.84|3783788|41|NC_009523|PILER-CR
GGGCGCTGTCACAACGCATTCCCTGGGAGGGGGTTTCCGTT
>70.85|3783863|40|NC_009523|PILER-CR
TATGGGCGACCGCCGTCCGCGCCGCCGCCGTCGATGAGTT
>70.86|3783937|40|NC_009523|PILER-CR
TCGACGTTCACCGGAACGTGGACGAGAAGACACTCGCGTT
>70.87|3784011|40|NC_009523|PILER-CR
TAGTTCCCTATGTGGTAGCGTCTTTTATGTTCTTCATGTT
>70.88|3784085|40|NC_009523|PILER-CR
AGGAACGCATGATCGAACCGACCACCTCACCGACCACGTT
>70.89|3784159|39|NC_009523|PILER-CR
ATGTCCGCCGGTTCATCTGGCTGGACAACTACGGGTGTT
>70.90|3784232|40|NC_009523|PILER-CR
GGCTGGACGATCTAGTTTTTATACTAGATGTTGCAGTGTT
>70.91|3784306|41|NC_009523|PILER-CR
CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGAGTT
>70.92|3784381|40|NC_009523|PILER-CR
GGCACGTCGCGGGGTTCGTGACCAACGTGCGGCTCTCGTT
>70.93|3784455|42|NC_009523|PILER-CR
CGTCCGCCTCACGATCCGCCCGCTTGGGCGGTTCGGCGAGTT
>70.94|3784531|43|NC_009523|PILER-CR
TCCGTCCAGGTCGCATCCAGCGCCAGCAGCGCCTGGCGCCGTT
>70.95|3784608|40|NC_009523|PILER-CR
CTGCGGGAGGCGTTCCCGCGCCCCGGCGCCGCGCTGTGTT
>70.96|3784682|40|NC_009523|PILER-CR
GATTATCGACGCGATCGCCCCGGTCGCAGATGTGATTGTT
>70.97|3784756|41|NC_009523|PILER-CR
GGAACGCCCCCCTCCCCCGAAGGGGGGAGGGCGATCCGGTT
>70.98|3784831|40|NC_009523|PILER-CR
TGGAATCCGCACCGACACGCTCGATCTGAGCGTGCCGGTT
>70.99|3784905|39|NC_009523|PILER-CR
CCTCGCCATGCGCCGCGCCGACGGGCAGGGCATGCTGTT
>70.100|3784978|39|NC_009523|PILER-CR
CCTCCAAACTGAGTAAGTTTGGCTCTCCTGACCCACGTT
>70.101|3785051|41|NC_009523|PILER-CR
TCCGGGAGCAGGCCGAGCAGCTTCGAAAGGGGCTGGAGGTT
>70.102|3785126|40|NC_009523|PILER-CR
GGGACACCTACCGGGCGGCGCTCGATGCAGCTCTCGAGTT
>70.103|3785200|41|NC_009523|PILER-CR
CTCGAGGCGCGGGCCGCGCGCCTTGGCGGCGAGCTCGTGTT
>70.104|3785275|41|NC_009523|PILER-CR
TTTAGCAGTTCGCCCATCTCCGTTTTTTAATCTGGAATGTT
>70.105|3785350|40|NC_009523|PILER-CR
AAGCGCGCGCGCGGCGGGACGCCGAACGGCGCGCTGCGTT
>70.106|3785424|40|NC_009523|PILER-CR
CGACCTCGCGGATTCCCGCGCCGACGCGTATCGGAACGTT
>70.107|3785498|40|NC_009523|PILER-CR
CAGCGCGAAGTTGGAGGAGAGGCGCAGTATGAGTCTAGTT
>70.108|3785572|41|NC_009523|PILER-CR
CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGAGTT
>70.109|3785647|43|NC_009523|PILER-CR
GGAGGTACGCGGCGTAGCATACGCAGCGTGCCTTGACGAGGTT
>70.110|3785724|42|NC_009523|PILER-CR
TCGCGTGGCGGAGCCGCACCCGGAGCGCCAGCGTATCTCCGT
>70.111|3785800|40|NC_009523|PILER-CR
TCACGAGATCCGGAGGAAGCTGGAGAAATGCCAGTTCGAT
>70.112|3785874|38|NC_009523|PILER-CR
TCGGGAACCAGCAGTGCGTCGACCGCCATCGGGTCGGT
>70.113|3785946|42|NC_009523|PILER-CR
TCCCCCCGAAGGGGGGGGGCGAGCCGTTTGCATTCCCGCCGT
>70.114|3786022|42|NC_009523|PILER-CR
TCATCGTTTCCATTTCCTTTCTCCTTGCCCACCCGCCGTGGT
>70.115|3786098|39|NC_009523|PILER-CR
TCGAAAAATGAGTACCATCTTTGTGGTGGCGGCAGCGGT
>70.116|3786171|42|NC_009523|PILER-CR
TCGCACAAAGTGGGGCGCGGATTACCTGATAACAGCGGAGGT
>70.117|3786247|41|NC_009523|PILER-CR
TCGATCCAATCCGGATCGGTCGGGGGAGACCCCGCCCCCGT

CRISPR arrays and Neighbor proteins around NC_009523_70

CRISPR arrays

The CRISPR arrays of NC_009523_70

>merge|NC_009523|70|3781897-3786321|CRT,CRISPRCasFinder,PILER-CR
CCCTATCATCCTCTGCACTGCGGACAGTGGTCACTTCTCTCTCCCCTCACTCCTCTTCCCTCACTCCTCGCACGGTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCGGGGGGCAAGGAGGAAAGAAAAATGTTCTTTGAATTTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGCTTGCCTGGCGCAGGCGCCGGACGACGCGGACGTGTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTGTTTGGGGGGTGGTGGAGTGGAGGTACGACCTCCACGTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTTATCTTGGCGGACCGAAGGACGATGACGACGACGAGTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTGATAAACAGTTGGACCCGAGTGCGTATCGTTTATAAGTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCAAGGGGACTAGTAGTCCCCGCCCCCCGCCGCGCTCGCCGTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCTTTCCAGACGCCGTCCTTGGGGGACGATTTTAAACTGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGGTCTCCCAGGCGATGGACAATCTCACGCCCTTCAAGGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCCATCGCCTGGGGGGTCCGGGTCTCCCCCAACAAGAAGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCTATTATGGGATTCAAGTCTAAACGACTGGCCCATCTTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGGAAACCGTGGGTCCGAGGTCGTGGGAACCGTCATGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCAAGCGCGGGCACAGAAGGAGATCGAATTGCGCAAGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCTGGGGCAAGGAGGAAAAATGGAAGCTCTGTTTTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGCCGCGCCGCCCGCCAGAGGAGGTATGAGATGAGTCATGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCGCGCAACGAAAGGAGAACATATGAACCCGAATATTCATGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCCGCTTACAAGGCTCTGGGTACGCCAGATGAGCCTACGTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCACTCGATATTACAGGTCGTATTGCAGGGTTTGCCAAGTTTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCCCTCGGGATGCTTGCTCTCCTGGCAGGAGGCCTTTTTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCTGCAGACCATAGTATCGTTAGTAACGGGGGTTTTTTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCCTTTTTAGCCCCTTTTGTGCCGGTGATTGTTTTCCTTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGATTTCCGGAAATTTCGGATGTTATTTCCTTTCAAGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCAATCTTGGGGCGTGTACTTTTTGTACACACTGTACGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCATGGACGACAACCAGTCAAACCAGTCGCCGGACGAGCGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGACGCGGGAGACTGAACTTCCGCTCGCAATGGTGCGGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGGGCGCTGTCACAACGCATTCCCTGGGAGGGGGTTTCCGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTATGGGCGACCGCCGTCCGCGCCGCCGCCGTCGATGAGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCGACGTTCACCGGAACGTGGACGAGAAGACACTCGCGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTAGTTCCCTATGTGGTAGCGTCTTTTATGTTCTTCATGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCAGGAACGCATGATCGAACCGACCACCTCACCGACCACGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCATGTCCGCCGGTTCATCTGGCTGGACAACTACGGGTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGGCTGGACGATCTAGTTTTTATACTAGATGTTGCAGTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGAGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGGCACGTCGCGGGGTTCGTGACCAACGTGCGGCTCTCGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCGTCCGCCTCACGATCCGCCCGCTTGGGCGGTTCGGCGAGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCCGTCCAGGTCGCATCCAGCGCCAGCAGCGCCTGGCGCCGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCTGCGGGAGGCGTTCCCGCGCCCCGGCGCCGCGCTGTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGATTATCGACGCGATCGCCCCGGTCGCAGATGTGATTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGGAACGCCCCCCTCCCCCGAAGGGGGGAGGGCGATCCGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTGGAATCCGCACCGACACGCTCGATCTGAGCGTGCCGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCCTCGCCATGCGCCGCGCCGACGGGCAGGGCATGCTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCCTCCAAACTGAGTAAGTTTGGCTCTCCTGACCCACGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCCGGGAGCAGGCCGAGCAGCTTCGAAAGGGGCTGGAGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGGGACACCTACCGGGCGGCGCTCGATGCAGCTCTCGAGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCTCGAGGCGCGGGCCGCGCGCCTTGGCGGCGAGCTCGTGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTTTAGCAGTTCGCCCATCTCCGTTTTTTAATCTGGAATGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCAAGCGCGCGCGCGGCGGGACGCCGAACGGCGCGCTGCGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCGACCTCGCGGATTCCCGCGCCGACGCGTATCGGAACGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCAGCGCGAAGTTGGAGGAGAGGCGCAGTATGAGTCTAGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCCGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGAGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCGGAGGTACGCGGCGTAGCATACGCAGCGTGCCTTGACGAGGTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCGCGTGGCGGAGCCGCACCCGGAGCGCCAGCGTATCTCCGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCACGAGATCCGGAGGAAGCTGGAGAAATGCCAGTTCGATTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCGGGAACCAGCAGTGCGTCGACCGCCATCGGGTCGGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCCCCCCGAAGGGGGGGGGCGAGCCGTTTGCATTCCCGCCGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCATCGTTTCCATTTCCTTTCTCCTTGCCCACCCGCCGTGGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCGAAAAATGAGTACCATCTTTGTGGTGGCGGCAGCGGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCGCACAAAGTGGGGCGCGGATTACCTGATAACAGCGGAGGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTCTCGATCCAATCCGGATCGGTCGGGGGAGACCCCGCCCCCGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC

>NC_009523|70|8|3781897-3786321|CRT
CCCTATCATCCTCTGCACTGCGGACAGTGGTCACTTC	TCTCTCCCCTCACTCCTCTTCCCTCACTCCTCGCACG
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGGGGGCAAGGAGGAAAGAAAAATGTTCTTTGAATTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GCTTGCCTGGCGCAGGCGCCGGACGACGCGGACGT
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGTTTGGGGGGTGGTGGAGTGGAGGTACGACCTCCAC
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TTATCTTGGCGGACCGAAGGACGATGACGACGACGA
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGATAAACAGTTGGACCCGAGTGCGTATCGTTTATAA
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AAGGGGACTAGTAGTCCCCGCCCCCCGCCGCGCTCGCC
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTTTCCAGACGCCGTCCTTGGGGGACGATTTTAAACTG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGTCTCCCAGGCGATGGACAATCTCACGCCCTTCAAGG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCATCGCCTGGGGGGTCCGGGTCTCCCCCAACAAGAA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTATTATGGGATTCAAGTCTAAACGACTGGCCCATCTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAAACCGTGGGTCCGAGGTCGTGGGAACCGTCAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CAAGCGCGGGCACAGAAGGAGATCGAATTGCGCAAG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGGGGCAAGGAGGAAAAATGGAAGCTCTGTTTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GCCGCGCCGCCCGCCAGAGGAGGTATGAGATGAGTCAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGCGCAACGAAAGGAGAACATATGAACCCGAATATTCAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGCTTACAAGGCTCTGGGTACGCCAGATGAGCCTACGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ACTCGATATTACAGGTCGTATTGCAGGGTTTGCCAAGTTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCCTCGGGATGCTTGCTCTCCTGGCAGGAGGCCTTTTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGCAGACCATAGTATCGTTAGTAACGGGGGTTTTTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTTTTTAGCCCCTTTTGTGCCGGTGATTGTTTTCCTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GATTTCCGGAAATTTCGGATGTTATTTCCTTTCAAG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AATCTTGGGGCGTGTACTTTTTGTACACACTGTAC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ATGGACGACAACCAGTCAAACCAGTCGCCGGACGAGC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GACGCGGGAGACTGAACTTCCGCTCGCAATGGTGCGG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGGCGCTGTCACAACGCATTCCCTGGGAGGGGGTTTCC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TATGGGCGACCGCCGTCCGCGCCGCCGCCGTCGATGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGACGTTCACCGGAACGTGGACGAGAAGACACTCGC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TAGTTCCCTATGTGGTAGCGTCTTTTATGTTCTTCAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AGGAACGCATGATCGAACCGACCACCTCACCGACCAC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ATGTCCGCCGGTTCATCTGGCTGGACAACTACGGGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGCTGGACGATCTAGTTTTTATACTAGATGTTGCAGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGCACGTCGCGGGGTTCGTGACCAACGTGCGGCTCTC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGTCCGCCTCACGATCCGCCCGCTTGGGCGGTTCGGCGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGTCCAGGTCGCATCCAGCGCCAGCAGCGCCTGGCGCC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGCGGGAGGCGTTCCCGCGCCCCGGCGCCGCGCTGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GATTATCGACGCGATCGCCCCGGTCGCAGATGTGATT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAACGCCCCCCTCCCCCGAAGGGGGGAGGGCGATCCG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGGAATCCGCACCGACACGCTCGATCTGAGCGTGCCG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTCGCCATGCGCCGCGCCGACGGGCAGGGCATGCT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTCCAAACTGAGTAAGTTTGGCTCTCCTGACCCAC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGGGAGCAGGCCGAGCAGCTTCGAAAGGGGCTGGAG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGGACACCTACCGGGCGGCGCTCGATGCAGCTCTCGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTCGAGGCGCGGGCCGCGCGCCTTGGCGGCGAGCTCGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TTTAGCAGTTCGCCCATCTCCGTTTTTTAATCTGGAAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AAGCGCGCGCGCGGCGGGACGCCGAACGGCGCGCTGC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGACCTCGCGGATTCCCGCGCCGACGCGTATCGGAAC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CAGCGCGAAGTTGGAGGAGAGGCGCAGTATGAGTCTA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAGGTACGCGGCGTAGCATACGCAGCGTGCCTTGACGAG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGCGTGGCGGAGCCGCACCCGGAGCGCCAGCGTATCTC
CGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCACGAGATCCGGAGGAAGCTGGAGAAATGCCAGTTC
GATTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGGGAACCAGCAGTGCGTCGACCGCCATCGGGTC
GGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCCCCCGAAGGGGGGGGGCGAGCCGTTTGCATTCCCGC
CGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCATCGTTTCCATTTCCTTTCTCCTTGCCCACCCGCCGT
GGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGAAAAATGAGTACCATCTTTGTGGTGGCGGCAGC
GGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGCACAAAGTGGGGCGCGGATTACCTGATAACAGCGGA
GGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGATCCAATCCGGATCGGTCGGGGGAGACCCCGCCCC
CGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC

>NC_009523|70|67|3781971-3786321|CRISPRCasFinder
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGGGGGCAAGGAGGAAAGAAAAATGTTCTTTGAATTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GCTTGCCTGGCGCAGGCGCCGGACGACGCGGACGT
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGTTTGGGGGGTGGTGGAGTGGAGGTACGACCTCCAC
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TTATCTTGGCGGACCGAAGGACGATGACGACGACGA
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGATAAACAGTTGGACCCGAGTGCGTATCGTTTATAA
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AAGGGGACTAGTAGTCCCCGCCCCCCGCCGCGCTCGCC
GTCTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTTTCCAGACGCCGTCCTTGGGGGACGATTTTAAACTG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGTCTCCCAGGCGATGGACAATCTCACGCCCTTCAAGG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCATCGCCTGGGGGGTCCGGGTCTCCCCCAACAAGAA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTATTATGGGATTCAAGTCTAAACGACTGGCCCATCTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAAACCGTGGGTCCGAGGTCGTGGGAACCGTCAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CAAGCGCGGGCACAGAAGGAGATCGAATTGCGCAAG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGGGGCAAGGAGGAAAAATGGAAGCTCTGTTTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GCCGCGCCGCCCGCCAGAGGAGGTATGAGATGAGTCAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGCGCAACGAAAGGAGAACATATGAACCCGAATATTCAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGCTTACAAGGCTCTGGGTACGCCAGATGAGCCTACGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ACTCGATATTACAGGTCGTATTGCAGGGTTTGCCAAGTTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCCTCGGGATGCTTGCTCTCCTGGCAGGAGGCCTTTTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGCAGACCATAGTATCGTTAGTAACGGGGGTTTTTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTTTTTAGCCCCTTTTGTGCCGGTGATTGTTTTCCTT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GATTTCCGGAAATTTCGGATGTTATTTCCTTTCAAG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AATCTTGGGGCGTGTACTTTTTGTACACACTGTAC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ATGGACGACAACCAGTCAAACCAGTCGCCGGACGAGC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GACGCGGGAGACTGAACTTCCGCTCGCAATGGTGCGG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGGCGCTGTCACAACGCATTCCCTGGGAGGGGGTTTCC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TATGGGCGACCGCCGTCCGCGCCGCCGCCGTCGATGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGACGTTCACCGGAACGTGGACGAGAAGACACTCGC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TAGTTCCCTATGTGGTAGCGTCTTTTATGTTCTTCAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AGGAACGCATGATCGAACCGACCACCTCACCGACCAC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ATGTCCGCCGGTTCATCTGGCTGGACAACTACGGGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGCTGGACGATCTAGTTTTTATACTAGATGTTGCAGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGCACGTCGCGGGGTTCGTGACCAACGTGCGGCTCTC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGTCCGCCTCACGATCCGCCCGCTTGGGCGGTTCGGCGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGTCCAGGTCGCATCCAGCGCCAGCAGCGCCTGGCGCC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGCGGGAGGCGTTCCCGCGCCCCGGCGCCGCGCTGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GATTATCGACGCGATCGCCCCGGTCGCAGATGTGATT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAACGCCCCCCTCCCCCGAAGGGGGGAGGGCGATCCG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGGAATCCGCACCGACACGCTCGATCTGAGCGTGCCG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTCGCCATGCGCCGCGCCGACGGGCAGGGCATGCT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTCCAAACTGAGTAAGTTTGGCTCTCCTGACCCAC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGGGAGCAGGCCGAGCAGCTTCGAAAGGGGCTGGAG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGGACACCTACCGGGCGGCGCTCGATGCAGCTCTCGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTCGAGGCGCGGGCCGCGCGCCTTGGCGGCGAGCTCGT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TTTAGCAGTTCGCCCATCTCCGTTTTTTAATCTGGAAT
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AAGCGCGCGCGCGGCGGGACGCCGAACGGCGCGCTGC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGACCTCGCGGATTCCCGCGCCGACGCGTATCGGAAC
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CAGCGCGAAGTTGGAGGAGAGGCGCAGTATGAGTCTA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGA
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAGGTACGCGGCGTAGCATACGCAGCGTGCCTTGACGAG
GTTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGCGTGGCGGAGCCGCACCCGGAGCGCCAGCGTATCTC
CGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCACGAGATCCGGAGGAAGCTGGAGAAATGCCAGTTC
GATTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGGGAACCAGCAGTGCGTCGACCGCCATCGGGTC
GGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCCCCCGAAGGGGGGGGGCGAGCCGTTTGCATTCCCGC
CGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCATCGTTTCCATTTCCTTTCTCCTTGCCCACCCGCCGT
GGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGAAAAATGAGTACCATCTTTGTGGTGGCGGCAGC
GGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGCACAAAGTGGGGCGCGGATTACCTGATAACAGCGGA
GGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGATCCAATCCGGATCGGTCGGGGGAGACCCCGCCCC
CGTTCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC

>NC_009523|70|9|3781974-3786321|PILER-CR
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGGGGGCAAGGAGGAAAGAAAAATGTTCTTTGAATTTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GCTTGCCTGGCGCAGGCGCCGGACGACGCGGACGTGTC
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGTTTGGGGGGTGGTGGAGTGGAGGTACGACCTCCACGTC
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TTATCTTGGCGGACCGAAGGACGATGACGACGACGAGTC
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGATAAACAGTTGGACCCGAGTGCGTATCGTTTATAAGTC
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AAGGGGACTAGTAGTCCCCGCCCCCCGCCGCGCTCGCCGTC
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTTTCCAGACGCCGTCCTTGGGGGACGATTTTAAACTGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGTCTCCCAGGCGATGGACAATCTCACGCCCTTCAAGGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCATCGCCTGGGGGGTCCGGGTCTCCCCCAACAAGAAGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTATTATGGGATTCAAGTCTAAACGACTGGCCCATCTTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAAACCGTGGGTCCGAGGTCGTGGGAACCGTCATGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CAAGCGCGGGCACAGAAGGAGATCGAATTGCGCAAGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGGGGCAAGGAGGAAAAATGGAAGCTCTGTTTTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GCCGCGCCGCCCGCCAGAGGAGGTATGAGATGAGTCATGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGCGCAACGAAAGGAGAACATATGAACCCGAATATTCATGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGCTTACAAGGCTCTGGGTACGCCAGATGAGCCTACGTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ACTCGATATTACAGGTCGTATTGCAGGGTTTGCCAAGTTTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCCTCGGGATGCTTGCTCTCCTGGCAGGAGGCCTTTTTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGCAGACCATAGTATCGTTAGTAACGGGGGTTTTTTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTTTTTAGCCCCTTTTGTGCCGGTGATTGTTTTCCTTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GATTTCCGGAAATTTCGGATGTTATTTCCTTTCAAGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AATCTTGGGGCGTGTACTTTTTGTACACACTGTACGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ATGGACGACAACCAGTCAAACCAGTCGCCGGACGAGCGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GACGCGGGAGACTGAACTTCCGCTCGCAATGGTGCGGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGGCGCTGTCACAACGCATTCCCTGGGAGGGGGTTTCCGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TATGGGCGACCGCCGTCCGCGCCGCCGCCGTCGATGAGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGACGTTCACCGGAACGTGGACGAGAAGACACTCGCGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TAGTTCCCTATGTGGTAGCGTCTTTTATGTTCTTCATGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AGGAACGCATGATCGAACCGACCACCTCACCGACCACGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	ATGTCCGCCGGTTCATCTGGCTGGACAACTACGGGTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGCTGGACGATCTAGTTTTTATACTAGATGTTGCAGTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGAGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGCACGTCGCGGGGTTCGTGACCAACGTGCGGCTCTCGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGTCCGCCTCACGATCCGCCCGCTTGGGCGGTTCGGCGAGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGTCCAGGTCGCATCCAGCGCCAGCAGCGCCTGGCGCCGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTGCGGGAGGCGTTCCCGCGCCCCGGCGCCGCGCTGTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GATTATCGACGCGATCGCCCCGGTCGCAGATGTGATTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAACGCCCCCCTCCCCCGAAGGGGGGAGGGCGATCCGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TGGAATCCGCACCGACACGCTCGATCTGAGCGTGCCGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTCGCCATGCGCCGCGCCGACGGGCAGGGCATGCTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CCTCCAAACTGAGTAAGTTTGGCTCTCCTGACCCACGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCGGGAGCAGGCCGAGCAGCTTCGAAAGGGGCTGGAGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGGACACCTACCGGGCGGCGCTCGATGCAGCTCTCGAGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CTCGAGGCGCGGGCCGCGCGCCTTGGCGGCGAGCTCGTGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TTTAGCAGTTCGCCCATCTCCGTTTTTTAATCTGGAATGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	AAGCGCGCGCGCGGCGGGACGCCGAACGGCGCGCTGCGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGACCTCGCGGATTCCCGCGCCGACGCGTATCGGAACGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CAGCGCGAAGTTGGAGGAGAGGCGCAGTATGAGTCTAGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	CGGCGGCGGCGGCGGCGCGCCCCCTCCCACCCCCTCGAGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	GGAGGTACGCGGCGTAGCATACGCAGCGTGCCTTGACGAGGTT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGCGTGGCGGAGCCGCACCCGGAGCGCCAGCGTATCTCCGT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCACGAGATCCGGAGGAAGCTGGAGAAATGCCAGTTCGAT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGGGAACCAGCAGTGCGTCGACCGCCATCGGGTCGGT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCCCCCCGAAGGGGGGGGGCGAGCCGTTTGCATTCCCGCCGT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCATCGTTTCCATTTCCTTTCTCCTTGCCCACCCGCCGTGGT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGAAAAATGAGTACCATCTTTGTGGTGGCGGCAGCGGT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGCACAAAGTGGGGCGCGGATTACCTGATAACAGCGGAGGT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC	TCGATCCAATCCGGATCGGTCGGGGGAGACCCCGCCCCCGT
TCAATCCCCTTCATTGCGGGGCAGTGGTCGCTTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157041105.1|3779844_3780042_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957713.1|3772098_3772734_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|212496
NC_009523.1|WP_157041106.1|3781016_3781175_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957718.1|3788536_3788812_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_009523.1|WP_011957716.1|3776782_3779731_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009523.1|WP_011957726.1|3797217_3797595_-|hypothetical-protein	csx15	cd09766_csx15_CAS-I:CAS-III	gnl|CDD|187735
NC_009523.1|WP_011957710.1|3768046_3769981_+|hypothetical-protein	unknown	unknown	gnl|CDD|379902
NC_009523.1|WP_011957711.1|3770120_3771536_+|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl|CDD|235798
NC_009523.1|WP_011957720.1|3791390_3792389_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187766
NC_009523.1|WP_011957717.1|3786480_3788568_+|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl|CDD|379100
NC_009523.1|WP_011957714.1|3773050_3775498_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|379314
NC_009523.1|WP_011957719.1|3788944_3791269_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_009523.1|WP_041333814.1|3780535_3780910_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041337.1|3794263_3794803_-|reverse-transcriptase-like-protein	unknown	unknown	gnl|CDD|260011
NC_009523.1|WP_083763307.1|3796074_3796491_-|UPF0175-family-protein	unknown	unknown	gnl|CDD|377095
NC_009523.1|WP_011957721.1|3792896_3794231_-|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_009523.1|WP_011957724.1|3795556_3796078_-|DUF3368-domain-containing-protein	unknown	unknown	gnl|CDD|225269
NC_009523.1|WP_011957715.1|3775569_3776511_-|agmatinase	unknown	unknown	gnl|CDD|212538
NC_009523.1|WP_011957712.1|3771548_3771929_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333821.1|3797591_3798341_-|hypothetical-protein	unknown	unknown	gnl|CDD|187878

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011957721.1|3792896_3794231_-|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	6.8e-39	128.4	0.0
NC_009523.1|WP_011957720.1|3791390_3792389_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.3e-91	301.6	0.0
NC_009523.1|WP_011957726.1|3797217_3797595_-|hypothetical-protein	csx15	cd09766_csx15_CAS-I:CAS-III	1.5e-42	138.2	0.1
NC_009523.1|WP_011957717.1|3786480_3788568_+|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	6e-18	60.1	1.0
NC_009523.1|WP_011957718.1|3788536_3788812_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	3.5e-28	92.4	0.4

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957713.1|3772098_3772734_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|212496	cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs. Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.80289e-69
NC_009523.1|WP_011957719.1|3788944_3791269_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	4.31713e-11
NC_009523.1|WP_157041337.1|3794263_3794803_-|reverse-transcriptase-like-protein	gnl|CDD|260011	cd09279, RNase_HI_like, RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD) residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Most archaeal genomes contain only type 2 RNase H (RNase HII); however, a few contain RNase HI as well. Although archaeal RNase HI sequences conserve the DEDD active-site motif, they lack other common features important for catalytic function, such as the basic protrusion region. Archaeal RNase HI homologs are more closely related to retroviral RNase HI than bacterial and eukaryotic type I RNase H in enzymatic properties.	5.18884e-37
NC_009523.1|WP_011957718.1|3788536_3788812_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.27226e-29
NC_009523.1|WP_011957716.1|3776782_3779731_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.91275e-12
NC_009523.1|WP_011957726.1|3797217_3797595_-|hypothetical-protein	gnl|CDD|187735	cd09766, Csx15_I-U, CRISPR/Cas system-associated protein Csx15. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small protein loosely associated with CRISPR/Cas systems; some are fused to AAA ATPase domain, also known as TTE2665 family.	7.96798e-46
NC_009523.1|WP_011957715.1|3775569_3776511_-|agmatinase	gnl|CDD|212538	cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase. This agmatinase subfamily contains bacterial and fungal/metazoan enzymes, including proclavaminic acid amidinohydrolase (PAH, EC 3.5.3.22) and Pseudomonas aeruginosa guanidinobutyrase (GbuA) and guanidinopropionase (GpuA). PAH hydrolyzes amidinoproclavaminate to yield proclavaminate and urea in clavulanic acid biosynthesis. Clavulanic acid is an effective inhibitor of beta-lactamases and is used in combination with amoxicillin to prevent the beta-lactam rings of the antibiotic from hydrolysis and, thus keeping the antibiotic biologically active. GbuA hydrolyzes 4-guanidinobutyrate (4-GB) into 4-aminobutyrate and urea while GpuA hydrolyzes 3-guanidinopropionate (3-GP) into beta-alanine and urea. Mutation studies show that significant variations in two active site loops in these two enzymes may be important for substrate specificity. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	4.03251e-158
NC_009523.1|WP_011957711.1|3770120_3771536_+|dihydrolipoyl-dehydrogenase	gnl|CDD|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NC_009523.1|WP_011957720.1|3791390_3792389_-|CRISPR-associated-endonuclease-Cas1	gnl|CDD|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.46691e-105
NC_009523.1|WP_011957717.1|3786480_3788568_+|WYL-domain-containing-protein	gnl|CDD|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	5.66868e-12
NC_009523.1|WP_011957714.1|3773050_3775498_-|AAA-family-ATPase	gnl|CDD|379314	pfam13654, AAA_32, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	0
NC_009523.1|WP_011957724.1|3795556_3796078_-|DUF3368-domain-containing-protein	gnl|CDD|225269	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	1.13385e-24
NC_009523.1|WP_083763307.1|3796074_3796491_-|UPF0175-family-protein	gnl|CDD|377095	pfam03683, UPF0175, Uncharacterized protein family (UPF0175). This family contains small proteins of unknown function.	4.44479e-12
NC_009523.1|WP_011957721.1|3792896_3794231_-|RNA-directed-DNA-polymerase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	5.92175e-58
NC_009523.1|WP_011957710.1|3768046_3769981_+|hypothetical-protein	gnl|CDD|379902	pfam16927, HisKA_7TM, N-terminal 7TM region of histidine kinase. HisKA_7TM is an N-terminal region consisting of seven transmembrane domains found in Archaea and some bacteria. It is always found associated with histidine kinase.	6.84649e-13
NC_009523.1|WP_041333821.1|3797591_3798341_-|hypothetical-protein	gnl|CDD|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	0.000382218

Protein sequences

>NC_009523.1|WP_157041106.1|3781016_3781175_+|hypothetical-protein
MTSHRAGVPPGKGLAIDIAPCRRSAGRPPSWTLPRPLRRAVVGECEGRGAGD
>NC_009523.1|WP_041333814.1|3780535_3780910_+|hypothetical-protein
MPDHRRLAILIRHRKAAHVTLAQMACACGLEGSRAYESVSAWERGEAAKIAAPLTFPSSRLSRVDFLGEIGDLLHSGARLPLIPPAPFSHTGRRGSLGILMAETGDGIQGLAEKSTPVRGRAGD
>NC_009523.1|WP_157041105.1|3779844_3780042_-|hypothetical-protein
MERRHFNHLQDHPDAVYLAASGRMVLVQQYEAARQVKMRLLSREQASMRQSPARAGGVLLFTHFS
>NC_009523.1|WP_011957716.1|3776782_3779731_-|VWA-domain-containing-protein
MFSYRLMHAISVVTLLVMTFGVSGALTQEIALSATAYPPPATPVFSMPATGFMGLSWSGDGPGAHRGIDIWSWRSAGCSCREPTGCGVMPGAEVRAVYDGVVAGIYWGDRSGRWYSAGTPNPGNYPLSVVILEHQGVPGISTNKVYTVYQHMANDDTRESYVAQGLAVGQTVRQNEVIGRQGNWRYYVANDPRANDPITHLHFEVAYKPDTYTLPDRITVDPMPYLIGGGQSSCSGAPINSSAPPALKILRPSKANPVDVGTPASPSKFTIEIAYAGSASLQDVTVTVGGKPATIINMTPTRYTMEVQAPPQTGSGAYDLTVSIKGATATEASAVSYNGASNANVILTLDRSGSMSTDNKMPAAHNAARQFVDLMQVGDGVGVVGFDDRVTTAFPLTVITDPPPLSSLIFTDTMESGTGKWIPDPPWGLTSVAYRGSAAWTDSPAGNYANNANSVLAIADPIVLPASLTTPALSFWHRYDIENYFDYGRVEVSTDNGATWQSLAAYTGVNTTWSRAVIDLSPYRGQTIRLRFRLTTNAYLTRDGWYIDDVTVGPKWVDARADAIAAIGTLTPRGSTSIGGGLQRSQQLLSASAPGRTRAIVLLSDGQENTAPYVSDVLPQIRASQITVHTIGLGTDADQQLMLSIAAQTGGTYNYAPRPDQLAGIYNTISGAVSNRQTLITIDGTIAAGATVTRDVTVDSSVSEATFWVSWTNAGAGVTFSLQTPGGATIDAASAAANDSIDYVGGSTYAYYRVRAPTLTPGVWRILLSRAAASSATIIDEPTVATSEPLVERPADGFVEPEHDVTPDLSPDPAERVIEPEPVAQSTPAEHVVEPDSVAQPAATGDEPFVARVLARASLTMGFYLGKMAYLTTEPMICIVTLADNAPITGATVVLTVTLPGQPVALTLPLYDDGRHGDGAAGDGVYATTFIGPFTPGTATFSVIASGRSSAGEPFTRQGELSTYVATNPDPYTFVHLPLVVR
>NC_009523.1|WP_011957715.1|3775569_3776511_-|agmatinase
MPRYQPADSLASPRFAGIRTFARLPCVQTTEDVDVAVVGLPFDTGATFKVGARFGPEAIRSASVLLRPYNPELDVHVFATLSCIDYGDAPVAPGFIHESHAAITATLRPLAEARVVTLSLGGDHSVALPELRALAAVYGPLALVQFDSHGDLWDSYYGGQKYTHGTPFRRAVEEGLILPECSVQLGMRGPLYGPEDLQMARDMGFAVLTTTELLARSPREIGDLVRTRVGDRPAFLSFDIDFFDPAYAPGTGTPEVGGPTSFQGLAYLRACTGVRWVGGDVVEVLPALDHGQITAHLAAQVGYEFLSLVALAR
>NC_009523.1|WP_011957714.1|3773050_3775498_-|AAA-family-ATPase
MATELPPERLRRTFDPAQITLPATEAPPGDSGIIGQQRAVAALRFGLNMVDGGFNIYAAGPPGIGKMTAVQAFIEELAQRRPTPSDWCYVNDFDDPYQPRALRLPPGRGRRLQQDVHMMIAHLRAELPRAFESDEYAARRDEVLQQLNSRREELLSQISERAARQGFVLQAGPVGIMIIPILNGEPLSDAAFQAMTPEQREELLRRRAMLQDELKQVMKQVRAAERVARQRMEEIDRQVVEYIVGGLIDDLQEQYADLPEVVAFLEAVQKDIQENPDPFRSGGQQQPSGEAQVDLASVPWLKELPFRKYQVNVLIDNSRQQGAPVVVEYNPTYPNLFGRIEKETHFGALYTDFLMIKPGSLHRANGGFLVIEAEDLLRDYFSWDGLKRALRTREIQIEELADRLGLTTVKSLRPQPIPLELKVILVGPPPPYYLLAAYDDEFSTLFKVKADFDISMPLNAENLHGSLHLFRRFCEREGLLSISNDAAARLLEHSLRLAEDQERLSTHFGALTDVVREANYWACQEGCDAILERHVTRALEEKVYRSNMIQARIQELIDRGIILIDTEGAKIGQINGLSVLSLGDYTFGRPSRISVSVGPGRGSILDIEREVKLGGPIHSKGVLILSGYLADRYGQERPLTLSARLVFEQSYEGVEGDSASAAELFALLSALAELPLRQGIAVTGSVNQRGEIQAVGGVNQKIEGFFDVCRLRGLTGEQGVLIPQANVQNLMLRGDVVEAVREGQFHIWTALTIDEGIALLTGVPAGERDANGEYPPESVNGRVMTRLRAFAERLREGGKTNESDKRREGEQNAQG
>NC_009523.1|WP_011957713.1|3772098_3772734_-|SDR-family-NAD(P)-dependent-oxidoreductase
MQTALIWGAAGGIGRALVDTLSENGWRVLGIARDVAALSDMDIESYSAELSREADVAAAALWAAQQSEGAVNLWVYAAGDMIGKPLADTTASEWERIFGANVTGAHLAVTHSLALVPSGGHLVFIGAYVDRIMLPKLGAYAASKAALDAYVTVLAKEVRDRRVTNVRVGAVDTPLWRKAPFRLPKSAHAPGDVAAAVLRAYAEGHKGNLDL
>NC_009523.1|WP_011957712.1|3771548_3771929_+|hypothetical-protein
MPIMINLTSAGHGGTSLSCGTHGGCGVDCDCGCPYTGMEEKGNVELIADVERRYPNEWLVFVIPPSEDDFAPERGMLVAHSTDDAEVFEAITRITHNQVVHVYFNGTFDAYQKWMDAGMEVGKVEG
>NC_009523.1|WP_011957711.1|3770120_3771536_+|dihydrolipoyl-dehydrogenase
MTDTLYDVIVIGGGPGGYVAAIRAAQLGLKTAVVERQAMGGVCLNVGCIPTKALLHTADLLDELREAKRFGVIVEGVSLDWEATLRQKDTVVKTMTSGVSFLMKKNKIDVVNGSARLAGRGQVAVSSPEGQHRTLTAKHIIIAVGARPREIPAIGAVFDNDRILSSTGGLNIPTVPKSLLVVGAGAIGVEFASMYRAFGAEVTLVEMLPRVVPLEDEEVSAELARALNRRGIKIFAGAKLNNLEKVDGGVMARLVDVQGAEHALTFERALVGVGIVPNTSDIGLEEVGVALDPRGFIKVDDHMRTNVEGIYAIGDCATTTPWLAHKASAEGIVAAETIAGHHTQPLDYGKIPACTYCNPEIASVGLTEAKAREQGYDVKVGKFAFTGNGKATILGQRQGFVKIVADKQYDEVLGIHMIGPRVTELIAEGGLALSHEATAESIMRTVHAHPTLYEAIVEAAHAAAEGAAIHM
>NC_009523.1|WP_011957710.1|3768046_3769981_+|hypothetical-protein
MIDLPFLTNLLLAVNDILASAVLIVSFSLLVYLVLQNRYTPIARALAVLLGSIVVVFGGDVLTQQVQREETLHFLLRAQWLGIVGVPAGYIHLADALLDFSGQHNLRRRWSVPMAYVISAVFLALAWGTDLVLRNGVQVQPVAQFNAGPLFWVFTLYFTIACLAGLATTLHVRDAALTPTLRRRITYLSLTFVGPAIAVYPFLIIPLPENMIPFTVVLFLVAVGNVAVLMMTTVMVYSIAFQGLPLPDRLIKQDFIRWVLYGPFVGVSIALFLRATPILARWLGLPEQALLTAGVVIMTVIMPLFVNRLKPYLDALVYAQDHAEIDYLRALPRNTFTQADLRSLLENTLVVACGALRSETGFVAAPDDAGGYTVKTLVGSRQVVRRFVNEHPLTELMARLSRLPVRPPGDTPPADAFLRVEGFWLLPLRTPDGALLGCLGIAYPHDTLSVDARRLIGALTHRMELALETVQMQQRLFNTLRGLGPDMQSLQHLSTQLEQATPASLQTLESDVASLPEFPQLVKEALAHYWGGPKLSESPLLGLRTVRRVLEEQGGSPTRALQAVLRQAIENLRPDAQLDPSAQEWLLYNILEMRFLQGRRIRETADRLAMSESDLYRKQRIAVEEVARQLALMEESANRAMVER
>NC_009523.1|WP_011957717.1|3786480_3788568_+|WYL-domain-containing-protein
MNRWSLWLADAPAALQRLIARTHRISLPRACPAAERLRRLRRALCTPAAVRAVYAALDADVRAALDELRGARRGLDAATLTARYGAVRPWRHLARDPQPRSVAERLLLLGWLLPRPAAPGRAPRFALAPEVRRWLPQPLRLADDGPAPPAPLPLAQRAALALLLVAAAAPLPLRRDGALRRRALRVLQPLLPDAPAPELARLFHFLLPLLEARGLVQRHGGQCAPALGAAAFLAAPLDDQRARLVEAWLHCAAPDAWLRRLRVASAGLDEPALRRRLVQWAQALPPDRLLAPEATYDALAATFGPLADAHTHGFRVVRRPPWRRRSEARVWQAALRGPLAWLGVVAWHAGRVVRPTTWALADGAWRYGAPGEVTAPFGALDAAALTLAQGGRWVRGDAGGLTVQVAGASGVQGDRVRRLLARRAGEAPDGWWGTRAADAPALRLAEGALLLADAPGDLERALRGRSVRRYAQRLAAGVALVRAEHVAAVTRALARQGIAVDRLPGGGALAAGGTLPAAPLAPGECAALLAACAYARRYAPEGLPLVIPATLEARLWQGVTPPLRAAVEAALASIEAPEAAGSGGTGSDAAPLCTDPDAVLRTVRRALTQQRLVTLAYETGGEGRITRRTVRPLGLERRGERWLLHAYCLQRRAERTFRLDRVRGCALAPPAERWVPEPAAAAVQPVRPDSALDPC
>NC_009523.1|WP_011957718.1|3788536_3788812_-|CRISPR-associated-endonuclease-Cas2
MFTIISYDIVDDRRRTNVMKYLKGWGTRVQYSVFECILDARAFATVVRELQRMIDQNTDSVRCYRLDEAAVTRIQIIGIGAVSKDPTHYLV
>NC_009523.1|WP_011957719.1|3788944_3791269_-|VWA-domain-containing-protein
MVSYRLVRFGIAMMALWMSGMWMVWLPDRTHSATMYPTPAGRVVMASAMDAIRSDAPRAFRIVRPSARRPVDAGSPFRPSNITIELTHPGHVTKQDVTVTIGGKPATIISITPLRYLLKVQAPPQPARGRYDLEVTIRGFTAKEPGAVTYFGVDNVSVILTIDRSGSMAGNKMVAAREASRQFVDLMQAGDGIGIVGFNDGVVMPLNLTTILDSPPQSAFLFSDDMESGADQWNAQASWGLTSTARNSAWAWTDSPSGNYANNTNSALTIATPIAIPASMSNPALMFWHRYDIASPDRGEVEISTNNGATWQRLRLFTGTATSWRREVIRLDDYRGQTIRMRFRLVTDAFGVRDGWYIDDVTIGPEWDDVRARAQAAIDTLNSRGATSIGGGLQSSQRMLDTANPDLPRVIILLSDGQENTRPFVADVLPQIRAAQTTVHTIGLGRDADQQLMLSIAAQTGGTYNYAPTPEQLSGIYNTISGAVSNRQTLVTASGRVAPGGVVTQEVTIDRSISEATFWVGWTRTDTRLNLTLQTPSGGSIDPRTPRVNPNVVYVSGANYAYYRVRTPTLVPGVWQMRISRAAATPAIASETTLPFEVGVEEQSTSEVETETAPVNAPPEERTTEATATTTQPDSTNDEPFTVQALARADLTLDVALAKTVYLTTEPIVCFVILTDDAPITGATVSLSVLYPGQTTPFVVPMRDDGLHGDGAANDGVYAAYLSGSGEPGTVTFTVEATGSNRAGEPFTRRSELSTFIAAGSTPRQVVHLPLVVR
>NC_009523.1|WP_011957720.1|3791390_3792389_-|CRISPR-associated-endonuclease-Cas1
MPTLYIQEQGVMVRKRDNQVLITKDGQTLSEVPLAKIDQVVLMGRGVQLSTALLIDLLERGIPVTFTNQHGSRHYATLTAGPSRFGDLRIRQMQFVGAPDRALRLAKDIVSAKLTNQRRLLAATGWPAAATAIAQIDAALTAAANAPHVDMLRGHEGAAAAAYFGAWRASLPPVWGFGGRAFYPPPDPINAMLSFGYTLALHDVITAVQITGLDTYLGVFHVIEPGRPSLALDLLEEFRPLIVDRLVIDLVRTNAIGREHFHHPQERPDAVYLDDVGRTLLVQRYESMLQTKVRLPGGEQTPLRRVILLQAQAIARIVRGEQEQYTGFSLNN
>NC_009523.1|WP_011957721.1|3792896_3794231_-|RNA-directed-DNA-polymerase
MPLFPRYQGPPLMPQICSVENLTLAWRRVRSNIHVARRGRSAGLDAVTLRDFEVDWTRQMAQLADELQQGTYRPLPAKRVAIPKASGGERAIAILAVRDRVAQRAVQQVLDPLFDPCFLDCSYGCRPYVGVPDAIARVQRYADQGLGWVVDADIATCFDSLDQRVLLSLVRQRIDELPVLKLIAQWLEAGVLQGEAALPGDTPPTPLQRGEAAVRRALSWGAERLHPPPPVGPYAAAMWETPGGSIGEDGWAPRQPGLESHLWTAVMLARPVIDGARQALPYLQRIGGRRLAVAGAVAVGALALSEAAARLRHASRRGVPQGGALSPLLANIYLHPFDVAMMGQGLRLVRFMDDFVVMCATQEEAECALQFAQRQLHILRLTLNAEKTHITAYADGIEFLGAALAPRARGLRLGEGVVDFAEAECALRDALRNARRRMKRKVEG
>NC_009523.1|WP_157041337.1|3794263_3794803_-|reverse-transcriptase-like-protein
MHCNHSADCRHAADRSCAPDSGDAVVSHLLLQVDGTPGCPPRGIAGLGIIVRNQAGAVLAWSCERAPATTNNEAEYLAVIAGLTLVIRRFPGVAVRCLTDSRIVVDQLTGRHAVRAMALKPLHERARMLVLQHGSVTFIAIPRELNRLADALAWEALDGRGWLARVGREAGLATVNSDM
>NC_009523.1|WP_011957724.1|3795556_3796078_-|DUF3368-domain-containing-protein
MSVVSNTTVLSNFASVGQLAVLRHIFGSVYLPAEVFAEIEDAQREGYAFFADIEQHMFPFTQDGWLHLVSLTETELRLAATLSAGLHRGERSCIAIALQRNWLMLTDDRAARAEARLRQARFSGSIGCLVLAVERGLVPLAQANGWLEAMIAQGYYAPWTDLSLLINRGPAET
>NC_009523.1|WP_083763307.1|3796074_3796491_-|UPF0175-family-protein
MAPPTGSILPARQSPAAVVQYIPAETYDMTSGAKEECAMVTVQDLVKAKLYADDNAVIVDALRHLLRNRPDLRINLAIYRYQHEAISLAQAADLAGVSWPQMRDILRERGIPLQLGPETVEEARAEVDALYEELRPRS
>NC_009523.1|WP_011957726.1|3797217_3797595_-|hypothetical-protein
MILLNFSHPLTEQQIARIVEIIGAAPEVRAIESQIDRERPLAVVAAELADRAGLTPDEWQTIPLLINPPALAPLAVALLAEIHGRSGQFPAMVNIRPIAGSIPTRYEVAEILNLQAIREEARRRR
>NC_009523.1|WP_041333821.1|3797591_3798341_-|hypothetical-protein
MKLNRLGDFLAPFLDSRAPALFIVASLVLAMLGNALYELVLLMFGAQPTTLIGIIVGSALIFPFLVWGVRRVIEGIARKTQTIEVIPAERIEPHSALVLPVGLRPQGPERAILEWHQPGRALRHCWLIVSPQVRRDARSKLSDLTQWLIENNVDVHTIDIADATSLDETFRATMQALREAHGPVQALPAAVDITGGTAVMSVGMALAARNWDTSVQYYPAVYNKEGNVIINSATAPKQIRFAGIGKVAP

Crispr_ID: NC_009523_71

• CRISPR_ID: NC_009523_71
• CRISPR_location: 3854177-3854510
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 5 spacers

Consensus repeat of NC_009523_71

Consensus_repeat	Method
CACCGCTCCTCGCGCACGCGGTTACAGCG	PILER-CR
CACCGCTCCTCGCGCACGCGGTTACAGCG	CRISPRCasFinder
CACCGCTCCTCGCGCACGCGGTTACAGCG	CRT

spacers of NC_009523_71

>71.1|3854206|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CACCCCAACGCGAACGCGCGTTCTGACCAGTC
>71.2|3854267|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGTTTTCCGCAAATTATTGTCGCTGTGTTGCA
>71.3|3854328|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TATGGACAATCTGTTGCCGGACATTGACGTGA
>71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTCGGCGACGCGCCGACATTGGCGGAGTGGAA
>71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT
GTTCGCCCGGTGCGCGCGATGCGCAGGGCGCA

CRISPR arrays and Neighbor proteins around NC_009523_71

CRISPR arrays

The CRISPR arrays of NC_009523_71

>merge|NC_009523|71|3854177-3854510|PILER-CR,CRISPRCasFinder,CRT
CACCGCTCCTCGCGCACGCGGTTACAGCGCACCCCAACGCGAACGCGCGTTCTGACCAGTCCACCGCTCCTCGCGCACGCGGTTACAGCGCGTTTTCCGCAAATTATTGTCGCTGTGTTGCACACCGCTCCTCGCGCACGCGGTTACAGCGTATGGACAATCTGTTGCCGGACATTGACGTGACACCGCTCCTCGCGCACGCGGTTACAGCGTTCGGCGACGCGCCGACATTGGCGGAGTGGAACACCGCTCCTCGCGCACGCGGTTACAGCGGTTCGCCCGGTGCGCGCGATGCGCAGGGCGCACACCGCTCCTCGTGCAGGCGGTTACAGCC

>NC_009523|71|10|3854177-3854449|PILER-CR
CACCGCTCCTCGCGCACGCGGTTACAGCG	CACCCCAACGCGAACGCGCGTTCTGACCAGTC
CACCGCTCCTCGCGCACGCGGTTACAGCG	CGTTTTCCGCAAATTATTGTCGCTGTGTTGCA
CACCGCTCCTCGCGCACGCGGTTACAGCG	TATGGACAATCTGTTGCCGGACATTGACGTGA
CACCGCTCCTCGCGCACGCGGTTACAGCG	TTCGGCGACGCGCCGACATTGGCGGAGTGGAA
CACCGCTCCTCGCGCACGCGGTTACAGCG

>NC_009523|71|68|3854177-3854510|CRISPRCasFinder
CACCGCTCCTCGCGCACGCGGTTACAGCG	CACCCCAACGCGAACGCGCGTTCTGACCAGTC
CACCGCTCCTCGCGCACGCGGTTACAGCG	CGTTTTCCGCAAATTATTGTCGCTGTGTTGCA
CACCGCTCCTCGCGCACGCGGTTACAGCG	TATGGACAATCTGTTGCCGGACATTGACGTGA
CACCGCTCCTCGCGCACGCGGTTACAGCG	TTCGGCGACGCGCCGACATTGGCGGAGTGGAA
CACCGCTCCTCGCGCACGCGGTTACAGCG	GTTCGCCCGGTGCGCGCGATGCGCAGGGCGCA
CACCGCTCCTCGTGCAGGCGGTTACAGCC

>NC_009523|71|9|3854177-3854510|CRT
CACCGCTCCTCGCGCACGCGGTTACAGCG	CACCCCAACGCGAACGCGCGTTCTGACCAGTC
CACCGCTCCTCGCGCACGCGGTTACAGCG	CGTTTTCCGCAAATTATTGTCGCTGTGTTGCA
CACCGCTCCTCGCGCACGCGGTTACAGCG	TATGGACAATCTGTTGCCGGACATTGACGTGA
CACCGCTCCTCGCGCACGCGGTTACAGCG	TTCGGCGACGCGCCGACATTGGCGGAGTGGAA
CACCGCTCCTCGCGCACGCGGTTACAGCG	GTTCGCCCGGTGCGCGCGATGCGCAGGGCGCA
CACCGCTCCTCGTGCAGGCGGTTACAGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957765.1|3839070_3840588_-|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224053
NC_009523.1|WP_011957763.1|3837146_3838109_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|119321
NC_009523.1|WP_011957780.1|3860856_3862584_-|aldehyde-dehydrogenase	unknown	unknown	gnl|CDD|223944
NC_009523.1|WP_011957777.1|3857360_3858308_-|zinc-ABC-transporter-solute-binding-protein	unknown	unknown	gnl|CDD|238498
NC_009523.1|WP_011957775.1|3855655_3856543_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl|CDD|334323
NC_009523.1|WP_083763308.1|3865471_3867184_+|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl|CDD|240528
NC_009523.1|WP_011957783.1|3865081_3865354_-|30S-ribosomal-protein-S20	unknown	unknown	gnl|CDD|376586
NC_009523.1|WP_011957778.1|3858613_3859192_+|peroxidase-related-enzyme	unknown	unknown	gnl|CDD|130981
NC_009523.1|WP_011957781.1|3862886_3863888_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381313
NC_009523.1|WP_011957766.1|3840592_3841705_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380654
NC_009523.1|WP_011957772.1|3848178_3850974_-|cation-transporting-P-type-ATPase	unknown	unknown	gnl|CDD|223550
NC_009523.1|WP_041333847.1|3844456_3846586_-|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|226702
NC_009523.1|WP_157041110.1|3842131_3844042_-|response-regulator	unknown	unknown	gnl|CDD|237425
NC_009523.1|WP_011957771.1|3847516_3848161_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|236541
NC_009523.1|WP_011957779.1|3859221_3860760_+|DUF333-domain-containing-protein	unknown	unknown	gnl|CDD|377156
NC_009523.1|WP_011957770.1|3846829_3847513_-|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl|CDD|223643
NC_009523.1|WP_011957768.1|3844053_3844497_-|response-regulator	unknown	unknown	gnl|CDD|381108
NC_009523.1|WP_011957764.1|3838105_3839074_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|119321
NC_009523.1|WP_011957782.1|3864127_3865075_+|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl|CDD|235511
NC_009523.1|WP_011957776.1|3856557_3857346_-|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224046

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957765.1|3839070_3840588_-|sugar-ABC-transporter-ATP-binding-protein	gnl|CDD|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NC_009523.1|WP_011957763.1|3837146_3838109_-|ABC-transporter-permease	gnl|CDD|119321	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.	2.25916e-65
NC_009523.1|WP_011957780.1|3860856_3862584_-|aldehyde-dehydrogenase	gnl|CDD|223944	COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion].	1.11303e-07
NC_009523.1|WP_011957777.1|3857360_3858308_-|zinc-ABC-transporter-solute-binding-protein	gnl|CDD|238498	cd01016, TroA, Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	7.91226e-140
NC_009523.1|WP_011957775.1|3855655_3856543_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl|CDD|334323	pfam00950, ABC-3, ABC 3 transport family.	4.99566e-59
NC_009523.1|WP_083763308.1|3865471_3867184_+|murein-biosynthesis-integral-membrane-protein-MurJ	gnl|CDD|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	3.177e-107
NC_009523.1|WP_011957783.1|3865081_3865354_-|30S-ribosomal-protein-S20	gnl|CDD|376586	pfam01649, Ribosomal_S20p, Ribosomal protein S20. Bacterial ribosomal protein S20 interacts with 16S rRNA.	8.22262e-22
NC_009523.1|WP_011957778.1|3858613_3859192_+|peroxidase-related-enzyme	gnl|CDD|130981	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme. This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.	1.56596e-66
NC_009523.1|WP_011957781.1|3862886_3863888_+|aldo/keto-reductase	gnl|CDD|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	1.172e-162
NC_009523.1|WP_011957766.1|3840592_3841705_-|ABC-transporter-substrate-binding-protein	gnl|CDD|380654	cd19999, PBP1_ABC_sugar_binding-like, monosaccharide ABC transporter substrate binding protein such as CUT2. Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type 1 periplasmic binding protein superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their substrate specificity is not known in detail.	1.30452e-128
NC_009523.1|WP_011957772.1|3848178_3850974_-|cation-transporting-P-type-ATPase	gnl|CDD|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NC_009523.1|WP_041333847.1|3844456_3846586_-|PAS-domain-S-box-protein	gnl|CDD|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	1.72586e-49
NC_009523.1|WP_157041110.1|3842131_3844042_-|response-regulator	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	1.72882e-109
NC_009523.1|WP_011957771.1|3847516_3848161_-|FAD-dependent-oxidoreductase	gnl|CDD|236541	PRK09496, trkA, Trk system potassium transporter TrkA.	9.97111e-43
NC_009523.1|WP_011957779.1|3859221_3860760_+|DUF333-domain-containing-protein	gnl|CDD|377156	pfam03891, DUF333, Domain of unknown function (DUF333). This small domain of about 70 residues is found in a number of bacterial proteins. It is found at the N-terminus the of AF_1947 protein. The proteins containing this domain are uncharacterized.	1.55612e-16
NC_009523.1|WP_011957770.1|3846829_3847513_-|TrkA-family-potassium-uptake-protein	gnl|CDD|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	1.10837e-46
NC_009523.1|WP_011957768.1|3844053_3844497_-|response-regulator	gnl|CDD|381108	cd17557, REC_Rcp-like, phosphoacceptor receiver (REC) domain of cyanobacterial phytochrome response regulator Rcp and similar domains. This family is composed of response regulators (RRs) that are members of phytochrome-associated, light-sensing two-component signal transduction pathways such as Synechocystis sp. Rcp1, Tolypothrix sp. RcpA, and Agrobacterium tumefaciens bacteriophytochrome response regulator AtBRR. They are stand-alone RRs containing only a REC domain with no output/effector domain. The REC domain itself functions as an effector domain. Also included in this family us Methanosaeta harundinacea methanogenesis regulatory protein FilR2, also a stand-alone RR. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.49847e-60
NC_009523.1|WP_011957764.1|3838105_3839074_-|ABC-transporter-permease	gnl|CDD|119321	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.	1.11031e-67
NC_009523.1|WP_011957782.1|3864127_3865075_+|DNA-polymerase-III-subunit-delta	gnl|CDD|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	6.36361e-51
NC_009523.1|WP_011957776.1|3856557_3857346_-|metal-ABC-transporter-ATP-binding-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	5.48727e-121

Protein sequences

>NC_009523.1|WP_011957772.1|3848178_3850974_-|cation-transporting-P-type-ATPase
MMEFHHLSVEQVFAALGSDPQGLSPAEAQNRLTRYGPNVLREPPRTPLIRTLLAHFTHLMAWLLWIGEGVAFAAQTPTLGIAIWLVNVINGLFSFWQEYKAEQATAALRRMLPSYARVRRGGEEVRILAERLVPGDVLLLAEGDHISADARLVRETELCVDQSALTGEAHPVRKTAEPVSGEGLSRVELPNLVFAGTSVVAGTGEAVVFATGMRTAFGEIARLTQSVGDQLSPLQREMERLTRAVSTIAVGVGLCFFMLAVAIADIDLANGFIFALGMIVAFVPEGLLPTVTLALAMGTQRMARRNALVKRLSAVETLGCTTVICTDKTGTLTQNEMTVRDIWVGGRSISVSGVGYAPEGQFSECGAPLEQPADDAELRQLLLAASLCNDARLIPPNAQTPSEDRWSILGDPTEAALLVAARKAGIEYETEMRRMPRLRALPFDSRRKRMSVVCRLPQSEGAAHPSAGFVVYVKGAPKELLALCASFAAGDVVHPLDDPQLARILAANDQYARAGLRVLAVAQRTLNALPMPCDTDHIERDLTFLGLVAMMDPPRPEVESAVATCHTAGIRIIMVTGDYGLTAESIARRIGIIREAHPRIVTGAELDSMDEAALRDALMGEVIFARVAPEHKLRVVNALRAQGHVVAVTGDGVNDAPALKQADIGVAMGRSGTDVAREAADIVLTDDNFASIVNAVEEGRAVYANIKKFATYIFTSNTPEAVPFVLFAFSGGRIPIALNVMHILSVDLGTDIVPALALGAEPPEPGVMDRPPRSLHDHVVTGAMLRRAYFWLGPVQSLAAMSAFYYQYWTNGYWGRWLDLPSSGPLYRSATAMALAAVVTTQIGNLFAQRSERLSFLRLPPTGNRLIWIGIATELILIVAIVYVPFLQEIIGTAAFDPINWVFLALWAPALLLVDEMRKWLIARRERSLRR
>NC_009523.1|WP_011957771.1|3847516_3848161_-|FAD-dependent-oxidoreductase
MRIIIVGCGRMGAGLALTLTQRGHDVTVIDRDPTAFAALGERFSGRIITGHGFDREVLRHAGITRTDGLAAVTSSDETNVVTARAARQFFRVPRVVARLYDPRKAEIYRRLGVLTISTTEWGVHRITELLSYSWFEPIVSLGSSVDIVDVEAPPALVGRSLASLTVPGEVHPVAVSRGGRCFLPTPETRLQAGDLVHIAVLTTSTGRLKALLGV
>NC_009523.1|WP_011957770.1|3846829_3847513_-|TrkA-family-potassium-uptake-protein
MFVLIVGGGKVGAHLAELLLASGHRVRVIELRAAARERLAQFLASDVIVAGSGSDPATLEACGARQADVMAAVTGDDEVNLVATSLARFEFNIPRTIARVNNPKNAWMFTAEMGVDVALSQADLMAHLILEEMSLGDMMTLLKLRRGRYSLVEEKIAAGSHAAGRTIAALGLPGECVVVAIFRSGGLVLPRGDTVLQTGDEVLALVSVEQVQRLAEILGGVHGDGLS
>NC_009523.1|WP_041333847.1|3844456_3846586_-|PAS-domain-S-box-protein
MGVSRMTAHFLRRFAQPPHFDDEEQTRIARTQHLLLVVCLTIALVASGVNALLQRPVPTAALLACSGFLLISFLLLHARRVRLSIIVLLGTIIMLTASLQVIGRGAHDTVTSLYATMIVIGSLLLDRRSFIGLVAATLLVIAGVVTAEARGLTRSPYEGDFGDWFDLALILGLTAFTSRLLSESLERSRAHARANEQALAQQTEALRLSEERYRILAANLPDSAVLIFDHDLRYVLADGPELAATGYLKEKIEGRTLCEVVSSAFAEQVEGNLRAVLSGRCFSAELPYGDRIYAYYYIPLVDDRGMVKYAMVLARNVTAQRQAEADLRASEAQLRMLAENMGDAIVQLDSHLNVVYVSPSVRRVLGCEPEDVAGKQIAALVSPDDAPAVMAAIEEARESGAAAIRVEYRFRNHQQMCIWLEAEVRLLYDAHQHFEGAILSMRDVTRRKEVEAERERLIAELEQKNAELERFTYTVSHDLKSPLITIQGFLGYLEQDIRNGDTDRALSDIRRISAAARRMEHLLQDLLELSRIGRVSAEPQTVPFNMIVQEALELIAGRIAERQARITVAPDMPLVHGDRRRLAEVVQNLVDNAIKFCDNQTVPEIEIGVHAVASNEAIFFVRDNGVGIDPRYHDQIFGLFNKLDPQSEGTGVGLTIVRRIIEVHGGRVWVESAGRGAGATFFFSLPTIHTQQHGVSHDRQRIQSIAGGR
>NC_009523.1|WP_011957768.1|3844053_3844497_-|response-regulator
MTDSAFRVLLVEDNDDHAELIRRTLGEHQRAPQIVHISDGESALDYLYRRGTWNDPNQSPRPHVILLDLRLPRVDGLEVLTSIKQSAELRHIPVIILSSSSAEGDVSRAYDAYANSYLVKPFGFEEFRSLMHDVGVYWLTHNKLSAI
>NC_009523.1|WP_157041110.1|3842131_3844042_-|response-regulator
MDAAERISLLLIEDDESHVALIERAFESWRSLFDLSVVHTLQEAYALLSGDSSDFDLIVCDWRLPDGEGLELLDFNRALPVILMTGYGDERVAVEAIRSGALDYIVKSDAAFADLPHVAQRAIRQWRAIQAQRRAEQELREIEARYRLITENTSDLIAILDDQHHFQYISPSVTTLLGHTAEALVGQDAFFLIHPDDLPYSEEYWCTMLQRTRATATFRYRHASGAWRWIECNIRAVEQGGGLTAIVVGRDITERRELEERLLQIQKMDALGRLSGGIAHDFNNMLAVIAGCTELARQLIPDDHPATGELIEIQHATERATALTRQLLAFAHRQRFEPRPIDLNTLILDMQKLLRRLIRENITLNTRLAPDLWLVRADPGQIEQVLVNLAINARDAMVDGGVLTITTENAVIDDAFDNRHPSLNPGMYVRLTVSDTGVGMDEETRRRAFEPFFTTKKPGEGTGLGLATCYGIVVQHGGAIELTSEPGCGTTVIIYLPRAYPSEETVALETGEHIDLKGSETILLVEDDPAVRTLTARVLRTHGYTVLEAGDGHEALTLAGERPIHLLLSDHVIPHMSSESLAHYLTALIPQMKVLFMSGYVVEPRPDVQALQEATVLQKPFTPTALLQRVRAVLDS
>NC_009523.1|WP_011957766.1|3840592_3841705_-|ABC-transporter-substrate-binding-protein
MTRRFFALFTLLIAIASLIAACGGAPTTTAPTAAPAGQPTAAPEGKKFTIGISNPFISSEYRTQMIQSLIEVNKEYMERGITNELVIESADTDVAGQIQQLQNLINKGVDAILVNPSDVNGLNDTLQEAINKGIIVISVDQELNTPGVYNVGIDQKEWAKISARWLAEKLGGQGNIVLIEGFPGHPANVARMDGVEEVLKEYPGIKVLGRETGKWDEATGQQVMSNFLASFPNLDGYWTQDGMAIGAMQAVMAANPPKWPILVGEGRCQFLQLWDQRLKEDPNFETIAVANPPGVSPTGLRIAVNMLMGKQVDKSKLGGANGLSFVIPVPVIVTKDNFQEVFTTMCKDKPATYLLDGIMTDEEVQQFFLK
>NC_009523.1|WP_011957765.1|3839070_3840588_-|sugar-ABC-transporter-ATP-binding-protein
MSLLLSARNVAKRYGAVQALVDASLEIGAGETLALIGANGSGKSTLSKVINGVVAPDGGQLLLDGRPVRFDSPHAAKDAGISTVFQELSLVPQMTVAENIWLTREPLGRGGLIDRQRERRGTEALLDLFAGTVRPDLTPDTPVSALLPDEKQIVEILKAISVNPRLLILDEATASLDSRQVQRLFELIGQWKARGTAIIFISHRMTEIEQIADRYSVLRNGQTVGAGAMKDATAGDLVALMAPETAGAVVARRRLSADLLATRRTVLQVENLQTGVLRGVSLQVREGELLGIGGLKGQGQRDLLLAIFGGVPYSGRMLLEGKPVRFTHPRQAMNQGVALVPGDRAGEGLLAIRSILENLLLPSWRAYGFPLRMGRARRDAGAIAARLEIKMPGLDAPVSVLSGGNAQKVVIGKWLLRNPRLLLLDDPTKGVDIGAKMEFYRLLTHLCDEGTTVILYSSDDEELVGLCDRVLVMHDGRISSELAGGSLTTANLVAASLGVVHRETS
>NC_009523.1|WP_011957764.1|3838105_3839074_-|ABC-transporter-permease
MKQSRWQQRTYRHPYLFALIVLIVAFTVNLLLQPNLIEPTALNRNMRVFLPLILVAIGQAIVMIGGGIDISVGSIVSVVNALLATQIGLSGDPATAVLIMVVAILVGMGAGALNGLFIAYLRLQPIITTFATSFVYAGLALFILPNPGGGVPPQFTAFYRETVVLWLPLAFYIIAALLLAWALVRRTRYGRYLYAVGGKANAAYETGVPVRAVQFSTYVISGLMAALGGIAMTLLTGSGNAQVGDPLTLASITAAVIGGTPLSGGAGGIAGPIIGAVILGLIRNIISFANVATWWQTFVNAAIIVLALAMPGIINLIRRRNA
>NC_009523.1|WP_011957763.1|3837146_3838109_-|ABC-transporter-permease
MKRLTISPPLAAVLLAIVLFLLSGFLPNGFGGNLDVAAAQAVNIVRLSVFLGIIAAGQTLVIISGNEGIDLSTGAVVTLTAILTYTIVNGRNEQVLPALLAVLIVGGMIGLINGAGVAFLNIAPLVMTLGMAGVVSGLILVITQGNVSGAVAPIMTQLIARPVFQGIPGAILIWIVFAALMWLLIERTTYGRHLFAIGTNRTTARLSGIRVTAVVIGTYALSGMLAGLGGFLVVGNTGVVHIRIGDPFLFPSIAAVAVGGTLLTGGKGSYFGTMAGALVLTLITSLLTTMQMPESVRRMVLGATLLVMISIYGRQRGFRQ
>NC_009523.1|WP_011957775.1|3855655_3856543_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MLNDLLFDYTFRTVALGSGIMGIVSGMLGAFAVLRRQSLLGDAMSHAALPGIVLAFIITGSKEPLALMIGAAVAGWIGALFVTAIISTTRIKQDSALGLILATFFGLGLVLLTWVQTLPNAAQAGLDKYLFGQAATLLERDVATMAAIGGLALLVLALFWKECAILSFDPDFARSMGLPVHLLSMLLTSLLVAAISIGLQAVGVVLMSALIVAPGVAARQWTDRLGVMVLLSGVFGTVAGVGGALLSSAAARLPTGPVIVVCISVLALISLLFAPRRGLVWNWFRDIRPVAGRGV
>NC_009523.1|WP_011957776.1|3856557_3857346_-|metal-ABC-transporter-ATP-binding-protein
MKTGQPAIQVTDLTVAYRDKPVLWDVDLTIPGGVLMGIIGPNGAGKTTLMKAILGLVRPSAGQVLVYGRPYAQQRRLVAYVPQRSSVDWDFPTSVLDVVVMGRYGALGWFRRPGKREREQALEALARVGMQDFASRQIGQLSGGQQQRVFLARALVQDAQVYLMDEPLQGVDATTERTIIHILHDLRATGKTVVVVHHDLQTVSEYFDQVALLNVRLVASGPVAEVFNAATLRATYGGQIAFLEGRDPGRSAPEPHAGITVS
>NC_009523.1|WP_011957777.1|3857360_3858308_-|zinc-ABC-transporter-solute-binding-protein
MGKLKTRAAIWIILAAALLVGCAQPATGSDDLAAHPIRVVATTGMVGDLVRNVGGERVEVVTLMGPGVDPHLYKASADDVVQLQRADIIFYNGLHLEAAMSEVFERMQSRSRTVAVTGGIPREALLPSDEYDNQFDPHVWFDVMLWRQTVEYVRDVLIDLDPSHASIYRTNAESYGRQLDELHAYVQSRAALIPEDQRVLVTAHDAFRYFGRAYGFEVHGLQGISTVVEAGAADVQQLADFIATRRIPAIFVETSVPQRTLAAVQSAVRARGFEVRIGGELFSDALGDPGTPEGEYIGMVRHNIDTIVTSLRGEG
>NC_009523.1|WP_011957778.1|3858613_3859192_+|peroxidase-related-enzyme
MSDNQRPVSRFPIPERLDDLPQDIRERIEKVAEKTGFIPNVFLALAHRPDEFRAFFAYHDALMERPSNLSKAEKEMIVVATSAANDCLYCVVAHGAILRIRSKNPRLATQIAANYRRAEITPRQRAMIEYALKVALDSARIDESDWQPLYDHGFTQEDIWEIGAIAAFFAMSNRLANMSALCPNDEFYTLGQ
>NC_009523.1|WP_011957779.1|3859221_3860760_+|DUF333-domain-containing-protein
MYASSRRLQWRLTLVVMVVFALLSSGCSPFPSQPATLTPPQRVTESPPVVSPTPVPATTPPVTPTPLAALTDPASLYCIEKGGRLEIRSSGNSSHIGVCILDDGTLCEQWSFYRGECQSDQTYNLPPAPPSADDKVFAALFADVRRRLPPEAFTDFAAQPMRSDDGRQWWVVYSLDMRNFGLDERAAHFVAIYSYDDNRWQERARVTLVKQQTGVNLEPAYLEEVRQVAIAPGKLWIQVEGGLGLHSGSYHLLSFDGVTLQPEVVAFSSSPNVGFVTDLNGDGLNEVVLRRFEYYIFCYACEVYYPFCEVYTWQNDDLVLLAISDLTAGYQGSPFAELNRKAVAFVQADLWAEALRAINDAVAQAGATDPPTTAGSLRWNQRLIRMIHDAHREAIETSAYPLINEVFYGDYARAVEHMRAYQAADLFRIDSPLIVGTVAEGWTENLGEYLVNHTGRALAVVPDRAEIYFVGAWGKFLVNPDDPAIGADLERAARLQPNDQFFADAFAWWQDR
>NC_009523.1|WP_011957780.1|3860856_3862584_-|aldehyde-dehydrogenase
MTAIAPDHQAVPNAPYAPPLWADVDRALADLHSQKDSWVQVSLDERIDLLAALRRSLAEAEDRWITISLESRGLAPGGYGEGEERTWFTILTRALRLIHQALIDVRDHGRPHLPGSLTTRSDGQVVAMVLPASRYDSALFPRMTGEVWIEPGMTVEEVVQRQAEVYRNPPERGRVALILNASQSSFLPVTDVLHKLFVDGDVVALKLHSTCASLASLFEEVFRPLLDQGVVRLIYGDKDLDAYLCAHELVDTIHFSGADAAFDTLIFGAGQEGVERRARREPVLAKPFSGEAGNVTPVLVVPGPWSDDDLHRHATLLVRAFVCNAASVSAAPRLIVQHRGWRRRDSFLASFEQVLARIPTRQAPFPEARRQLDALLNAHARAHRIGQADLDHLPWTVIPDLDPSSLDADCFVRTMFCPAVGELALDAKDAATFIDAAVEFLNRQVRGTVAATILIHPRTLRERRVRAAFDRALSDLQYGTITINTVAQQAVLAGVLPWGAFPIANGERRYGGKVANPLMLPNPQKSILRGPFSIPQLFLSVEPQRNIELCKAITRLEQAPSPWRLAQLMRLALRR
>NC_009523.1|WP_011957781.1|3862886_3863888_+|aldo/keto-reductase
MEYRLFGRTGVRVAPLCIGAMNFGNPTDEAEALRIIDRALDAGINMFDTANSYNNGESERIIGRALARDGKRDRVFLATKGHFPVGPGPNDRGNSRLHLMRACEDSLRRLQTDHIDLYQIHRPDPATPVEETLAALTDLVRQGKVRYVGCSTHPAWRVMEALMVSELKGYVRYVSEQPPYNLLDRRIENELLPLCQTYGLAIIPWAPLAQGVLAGRYTDIAAPPPDSRVALRGGIYAERVTARGIEVGRAFAGLAREHGLTPAQLALLWVKDQPGITAPIFGVRTIAQLEEALPVLEMTLSDDLRVACDALVPPGSAVVDFHNTSGWMKMRLP
>NC_009523.1|WP_011957782.1|3864127_3865075_+|DNA-polymerase-III-subunit-delta
MLYLIYGPDEYARSEALAALKARVPADVADLNMTTLDGRRTTLDDLVTACEAMPFLADRRLVIVYDLLKHQKAGKERDELRAYLERVPDFCDLVFIESEDVDRRSALFTFLKKHASVHECLPREGAALLTWLHERAQSLDVSLDRDAAQRLTLLAGNDGRLLVNELAKLASFVGRGGRITVREVDLLVADMQEQNLFAFIDDLSARRRSAALSSLRRLFDDGQAAQYILFMMARQVRILLGVKDLVAQRMRPDDIAAQLGQKPFVVRKAIEQVRGFSDADLRQLHRRLLELDHASKTGRAEIEAGLELIVADMCS
>NC_009523.1|WP_011957783.1|3865081_3865354_-|30S-ribosomal-protein-S20
MANTKSAEKRIRANARRALRNKMYRSRVKTAIKKAERAIFAGTPNAELVREAMSLLDRAAVKGIIHKNNAARRKSRLAKKFAKATAASPS
>NC_009523.1|WP_083763308.1|3865471_3867184_+|murein-biosynthesis-integral-membrane-protein-MurJ
MFLSSQFLVLSSQFLVLSSQFLVLGSPVKHPRALLNTIIVATGYLASRVLGLARDVLISNQFGTSAELAAFRASFGILDLIYLVVAGGALGSAFIPVFSAALEQRRDAWRLASAVLNLTLLALVAACTAVWICAAPLVALTVGRGLDEAERALTVDVLRLMLIQPFLLGVGGLAKATLESFNRFALPAIGSNLYNLGIIGGALLGPWFGIYGLVWGVNIGAALFLLVQLPGLRAVGATYRIGRQPSDAHPTRLPFLSFFHAEGVGQVLRLLGPRIFGQSAWQINIIAIVSLASTLGSAALAANAYALQLMMLPHGLIALSLATVLFPDMARQYAAGDRATLRATALGGVRAVLFLALPASAILGVLALPVLRALYQRGAFDDTSAALTAEALAMYALGLAGFAAAEIVVRAFFAMQDTRTPVIVGIGAVALNISLGWSFLELGMGLGGLGLAFSLANLFEATLLLALLGRRLGGLEHDFFRATGAMILATLACALTLALLHRSSYAVLPFVAPGDTYRWPGDFLPILVWLTGATVPGGLVYAGVAALLRVPELGATIARGQRILSRVRLR

Crispr_ID: NC_009523_72

• CRISPR_ID: NC_009523_72
• CRISPR_location: 3876137-3876246
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_72

Consensus_repeat	Method
GCCCTCGGCTATGCAGGGCGAAGCCCGCCTGCGCGGGCTATA	CRISPRCasFinder

spacers of NC_009523_72

>72.1|3876179|26|NC_009523|CRISPRCasFinder
GTGGAATAATTACTCAAAGACCATAC

CRISPR arrays and Neighbor proteins around NC_009523_72

CRISPR arrays

The CRISPR arrays of NC_009523_72

>merge|NC_009523|72|3876137-3876246|CRISPRCasFinder
GCCCTCGGCTATGCAGGGCGAAGCCCGCCTGCGCGGGCTATAGTGGAATAATTACTCAAAGACCATACGCCCTCGGCTATGCAGGGCAAAGCCCGCCTGCGCGGGCTATA

>NC_009523|72|69|3876137-3876246|CRISPRCasFinder
GCCCTCGGCTATGCAGGGCGAAGCCCGCCTGCGCGGGCTATA	GTGGAATAATTACTCAAAGACCATAC
GCCCTCGGCTATGCAGGGCAAAGCCCGCCTGCGCGGGCTATA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957791.1|3877728_3878610_+|DUF72-domain-containing-protein	unknown	unknown	gnl|CDD|376655
NC_009523.1|WP_011957787.1|3870693_3871734_-|threonine-synthase	unknown	unknown	gnl|CDD|236013
NC_009523.1|WP_011957780.1|3860856_3862584_-|aldehyde-dehydrogenase	unknown	unknown	gnl|CDD|223944
NC_009523.1|WP_049767607.1|3883775_3884603_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|238564
NC_009523.1|WP_011957794.1|3880601_3880946_+|ferredoxin	unknown	unknown	gnl|CDD|225945
NC_009523.1|WP_083763308.1|3865471_3867184_+|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl|CDD|240528
NC_009523.1|WP_011957786.1|3869272_3870676_-|aspartate-kinase	unknown	unknown	gnl|CDD|235773
NC_009523.1|WP_041333867.1|3878975_3879203_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957790.1|3876333_3877725_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-GatCAB-subunit-A	unknown	unknown	gnl|CDD|223232
NC_009523.1|WP_011957789.1|3874086_3875889_+|M61-family-metallopeptidase	unknown	unknown	gnl|CDD|226483
NC_009523.1|WP_011957781.1|3862886_3863888_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381313
NC_009523.1|WP_011957795.1|3880960_3882076_+|iron-ABC-transporter-permease	unknown	unknown	gnl|CDD|376439
NC_009523.1|WP_011957797.1|3883180_3883756_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957788.1|3872097_3874011_+|hypothetical-protein	unknown	unknown	gnl|CDD|274043
NC_009523.1|WP_011957793.1|3879288_3880593_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|238561
NC_009523.1|WP_011957796.1|3882072_3883095_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224045
NC_009523.1|WP_011957783.1|3865081_3865354_-|30S-ribosomal-protein-S20	unknown	unknown	gnl|CDD|376586
NC_009523.1|WP_011957785.1|3868191_3869250_-|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|236329
NC_009523.1|WP_011957782.1|3864127_3865075_+|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl|CDD|235511
NC_009523.1|WP_011957799.1|3884608_3885004_-|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|224523

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957791.1|3877728_3878610_+|DUF72-domain-containing-protein	gnl|CDD|376655	pfam01904, DUF72, Protein of unknown function DUF72. The function of this family is unknown.	2.10732e-76
NC_009523.1|WP_011957787.1|3870693_3871734_-|threonine-synthase	gnl|CDD|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
NC_009523.1|WP_011957780.1|3860856_3862584_-|aldehyde-dehydrogenase	gnl|CDD|223944	COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion].	1.11303e-07
NC_009523.1|WP_049767607.1|3883775_3884603_-|ABC-transporter-substrate-binding-protein	gnl|CDD|238564	cd01144, BtuF, Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	3.20926e-52
NC_009523.1|WP_011957794.1|3880601_3880946_+|ferredoxin	gnl|CDD|225945	COG3411, COG3411, Ferredoxin [Energy production and conversion].	1.33807e-18
NC_009523.1|WP_083763308.1|3865471_3867184_+|murein-biosynthesis-integral-membrane-protein-MurJ	gnl|CDD|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	3.177e-107
NC_009523.1|WP_011957786.1|3869272_3870676_-|aspartate-kinase	gnl|CDD|235773	PRK06291, PRK06291, aspartate kinase; Provisional.	0
NC_009523.1|WP_011957790.1|3876333_3877725_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-GatCAB-subunit-A	gnl|CDD|223232	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis].	1.60372e-171
NC_009523.1|WP_011957789.1|3874086_3875889_+|M61-family-metallopeptidase	gnl|CDD|226483	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only].	1.17173e-164
NC_009523.1|WP_011957781.1|3862886_3863888_+|aldo/keto-reductase	gnl|CDD|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	1.172e-162
NC_009523.1|WP_011957795.1|3880960_3882076_+|iron-ABC-transporter-permease	gnl|CDD|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.53241e-68
NC_009523.1|WP_011957788.1|3872097_3874011_+|hypothetical-protein	gnl|CDD|274043	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerD, one of two closely related chromosomal proteins along with XerC (TIGR02224). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and with homologs of XerD on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerD, as some apparent XerD examples score below the trusted and noise cutoff scores. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	0.00914435
NC_009523.1|WP_011957793.1|3879288_3880593_+|ABC-transporter-substrate-binding-protein	gnl|CDD|238561	cd01141, TroA_d, Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	1.16943e-55
NC_009523.1|WP_011957796.1|3882072_3883095_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	8.1282e-94
NC_009523.1|WP_011957783.1|3865081_3865354_-|30S-ribosomal-protein-S20	gnl|CDD|376586	pfam01649, Ribosomal_S20p, Ribosomal protein S20. Bacterial ribosomal protein S20 interacts with 16S rRNA.	8.22262e-22
NC_009523.1|WP_011957785.1|3868191_3869250_-|aspartate-semialdehyde-dehydrogenase	gnl|CDD|236329	PRK08664, PRK08664, aspartate-semialdehyde dehydrogenase; Reviewed.	0
NC_009523.1|WP_011957782.1|3864127_3865075_+|DNA-polymerase-III-subunit-delta	gnl|CDD|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	6.36361e-51
NC_009523.1|WP_011957799.1|3884608_3885004_-|acyl-CoA-thioesterase	gnl|CDD|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	5.10542e-43

Protein sequences

>NC_009523.1|WP_011957789.1|3874086_3875889_+|M61-family-metallopeptidase
MTIMYFISMLRPNTHLYDVALDIHPIEEPTLDLALPAWTPGSYLIRDYARHVQSFAVTDDQGAPLPWRKIDKTTWRIENGAARRIRVTYQVYAFELSVRTSHLDNTHGYFNPSNIFMYRCGHAHEPCLVHVQTPPGWRITTGLAPAPEQNDGWVTFHAHDYDELADSPFECGTHRVLTFEVDGISHDIALWGRGNEDEQRILTDTRTIVETTRAMFGRLPYRRYVFIVHLVDGGYGGLEHRNSVSNIVDRWGFRPARSYEKFLALTAHEFFHVWNVKRIRPAPLGPFDYTRENYTRQLWVMEGITSYYDHLILLRAGLISRERYLETIADDIKLLQSQPGRALQSLEQSSFDAWIKFYRPDENGPNSSVSYYLKGSLVALLLDLEIRRRTGGARSLDDVMRHLYAEYADDHVHDLYSGDRVKRPGFDDDDGFCRAVETVAGEEDGAYRTFLAHAVSGTGELDYARAFETVGLHLVWGHTLEKENDHLPAWHGLRLKTEHGRLKVSVVLAGGPGEAAGIYAGDELIALDGVRIDEERLKARMAERQPGQTVVFSLFRRDDLLHVPLQLAEAPPDTLTIAPVEAPTDEQTRQLEAWLKVIAS
>NC_009523.1|WP_011957788.1|3872097_3874011_+|hypothetical-protein
MAQREPTIASILMELAEEYDDVVAEREIYERVLHRRPSQARDPFASIRERLRFQASEVGWVRLGEGKLLPLRVALTGLRFRVAPDPHEMATGLLLRTRLIPFVPLNRTDFVLIDTGGSPIRFQFDAITRIDDLFGPMEQPAINIGDWMQQEGMFDGDTILVTIEQTSPLTLRFQREPYSAVLSIEARRQEQELLEGIVARVLSSRSLPISAAEAVLPVYARASWRTTYAGRPWQELVMSDRRLRLINGMFLSNRTHHSLVDLFDNQEKHFWEAHDAELLAAIDALQHDMLESRREAAAQEIWNGVAPRASTARVVFDTRTGETTVVQPDPINALQDYVEQIEERLRNGEYDQSEWDMIDEDDALFADVGIDDDELPMIDDLREFIAERPELLAAARRLMAALSPDEIERLRHAQSNEEIQNILAARFHRMLPDHPHLFATLVPYVASDTTISDFNGGLPELEAISDDDISPLDQEWDDENDAWDDELDDQPTPGDEALAASHELMERFYAFLLAQGKSEATAASRTGDLWIYADFLASYYAQTLAEGNYATLDECLFFFYPRRVASSSPRGARELCTSLKQFYAFLRAERNIDDRFAREMWRRRDQAARVVDLYERIDADSPQFERLFVRLFAPYTV
>NC_009523.1|WP_011957787.1|3870693_3871734_-|threonine-synthase
MLFERYGAFLPLTGQTPRLSLGEGDTPLIAAPRLARSIGVRELYLKYEGANPTGSFKDRGMVVAVAKAIEAGATSVICASTGNTSASAAAYAAHAGIESIVVVPAGKIALGKLAQALMYGARLLVIEGNFDEALRIVRDLARQFPVTLVNSVNPHRLEGQATAAYEICDTLGGPPDALCLPVGNAGNITAYWMGFRRYYEAGRINRLPKMLGFQAEGAAPIVHGAPVEHPETVATAIRIGNPASWCYALDARDQSGGSIDAVSDEQILRSWRDLARLEGVFAEPASAAGVAGLRKMVAEGRADPDACYVAVLTGHGLKDPGLAVEQFETPQPVPADMNAILRWLGW
>NC_009523.1|WP_011957786.1|3869272_3870676_-|aspartate-kinase
MPLLVMKFGGTSVGDAAAIQAVAAITEAQRAAWGRVVLVVSAMSGVTDMLIRGATTAASGDKHTFRDLDRMLREKHAAALAELVPDDQERTAIDDQIARLIDEFSILCHSVAVLGELSPRAIDAISSLGERMSVRVVAAALRARGIPAEALDASEFVVTTAHFGDARPLQEVTRERTRARILPLLGRGIVPVITGFIGATEQGVTTTLGRGGSDYSGAIIGAALDADEVDIYTDVDGVMTTDPRLAPDARVIPVLSYAEMGELAYFGAKVLHPRTIRPIVERGIPLRVRNTFNPYHPGTLVVQDVESNGQTVKAVTAIRNLSLVTVEGRGMIGVPGVAARTFGAVASVGANVLMISQASSEQSICFVVPSSTIPQVTYALEHNLAMELARRDIDRIWAREDVAIVTAVGAGMRDTPGVAARVFGALADNHINVIAIAQGSSECSISTVVAAADCDAAVRAVHRLTGV
>NC_009523.1|WP_011957785.1|3868191_3869250_-|aspartate-semialdehyde-dehydrogenase
MIHKRLPVAILGATGAVGQRMVQLLADHPWFEIAVLTGSDRTIGRPYGELVRWILDTPIPERVAKMIVQPTEAVADVAIALSALPTDVAREAEPLWAARTAVCSNASAYRAVADVPLIIPEVNPDQLALIERQRTERGWQGCLVTNPNCATISAVMPLKPLHDAFGLQKAHISTLQAVSGAGYPGVASLDIIDNIIPNIADGGEEAKIESEPRKLLGRVVEGQVIETQIAISAQVTRVPIIDGHTALIAASFAQKPSPEEALAVLEAFTPPEIVRHLPSSPERALIVHRVGDRPQPRRDRDAGRGMSASVGRVRACPVLDLRMVALSHNTIRGAAGGAILNAELLVASGIVS
>NC_009523.1|WP_083763308.1|3865471_3867184_+|murein-biosynthesis-integral-membrane-protein-MurJ
MFLSSQFLVLSSQFLVLSSQFLVLGSPVKHPRALLNTIIVATGYLASRVLGLARDVLISNQFGTSAELAAFRASFGILDLIYLVVAGGALGSAFIPVFSAALEQRRDAWRLASAVLNLTLLALVAACTAVWICAAPLVALTVGRGLDEAERALTVDVLRLMLIQPFLLGVGGLAKATLESFNRFALPAIGSNLYNLGIIGGALLGPWFGIYGLVWGVNIGAALFLLVQLPGLRAVGATYRIGRQPSDAHPTRLPFLSFFHAEGVGQVLRLLGPRIFGQSAWQINIIAIVSLASTLGSAALAANAYALQLMMLPHGLIALSLATVLFPDMARQYAAGDRATLRATALGGVRAVLFLALPASAILGVLALPVLRALYQRGAFDDTSAALTAEALAMYALGLAGFAAAEIVVRAFFAMQDTRTPVIVGIGAVALNISLGWSFLELGMGLGGLGLAFSLANLFEATLLLALLGRRLGGLEHDFFRATGAMILATLACALTLALLHRSSYAVLPFVAPGDTYRWPGDFLPILVWLTGATVPGGLVYAGVAALLRVPELGATIARGQRILSRVRLR
>NC_009523.1|WP_011957783.1|3865081_3865354_-|30S-ribosomal-protein-S20
MANTKSAEKRIRANARRALRNKMYRSRVKTAIKKAERAIFAGTPNAELVREAMSLLDRAAVKGIIHKNNAARRKSRLAKKFAKATAASPS
>NC_009523.1|WP_011957782.1|3864127_3865075_+|DNA-polymerase-III-subunit-delta
MLYLIYGPDEYARSEALAALKARVPADVADLNMTTLDGRRTTLDDLVTACEAMPFLADRRLVIVYDLLKHQKAGKERDELRAYLERVPDFCDLVFIESEDVDRRSALFTFLKKHASVHECLPREGAALLTWLHERAQSLDVSLDRDAAQRLTLLAGNDGRLLVNELAKLASFVGRGGRITVREVDLLVADMQEQNLFAFIDDLSARRRSAALSSLRRLFDDGQAAQYILFMMARQVRILLGVKDLVAQRMRPDDIAAQLGQKPFVVRKAIEQVRGFSDADLRQLHRRLLELDHASKTGRAEIEAGLELIVADMCS
>NC_009523.1|WP_011957781.1|3862886_3863888_+|aldo/keto-reductase
MEYRLFGRTGVRVAPLCIGAMNFGNPTDEAEALRIIDRALDAGINMFDTANSYNNGESERIIGRALARDGKRDRVFLATKGHFPVGPGPNDRGNSRLHLMRACEDSLRRLQTDHIDLYQIHRPDPATPVEETLAALTDLVRQGKVRYVGCSTHPAWRVMEALMVSELKGYVRYVSEQPPYNLLDRRIENELLPLCQTYGLAIIPWAPLAQGVLAGRYTDIAAPPPDSRVALRGGIYAERVTARGIEVGRAFAGLAREHGLTPAQLALLWVKDQPGITAPIFGVRTIAQLEEALPVLEMTLSDDLRVACDALVPPGSAVVDFHNTSGWMKMRLP
>NC_009523.1|WP_011957780.1|3860856_3862584_-|aldehyde-dehydrogenase
MTAIAPDHQAVPNAPYAPPLWADVDRALADLHSQKDSWVQVSLDERIDLLAALRRSLAEAEDRWITISLESRGLAPGGYGEGEERTWFTILTRALRLIHQALIDVRDHGRPHLPGSLTTRSDGQVVAMVLPASRYDSALFPRMTGEVWIEPGMTVEEVVQRQAEVYRNPPERGRVALILNASQSSFLPVTDVLHKLFVDGDVVALKLHSTCASLASLFEEVFRPLLDQGVVRLIYGDKDLDAYLCAHELVDTIHFSGADAAFDTLIFGAGQEGVERRARREPVLAKPFSGEAGNVTPVLVVPGPWSDDDLHRHATLLVRAFVCNAASVSAAPRLIVQHRGWRRRDSFLASFEQVLARIPTRQAPFPEARRQLDALLNAHARAHRIGQADLDHLPWTVIPDLDPSSLDADCFVRTMFCPAVGELALDAKDAATFIDAAVEFLNRQVRGTVAATILIHPRTLRERRVRAAFDRALSDLQYGTITINTVAQQAVLAGVLPWGAFPIANGERRYGGKVANPLMLPNPQKSILRGPFSIPQLFLSVEPQRNIELCKAITRLEQAPSPWRLAQLMRLALRR
>NC_009523.1|WP_011957790.1|3876333_3877725_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-GatCAB-subunit-A
MSDLTHLTIAEAADLLARREIAAVELTEAHLRRIDAHDARLNSFITITSDHALTQARAADAELTRGIRRGPLHGIPLALKDLYDTAGIRTTAGSTFFADRVPDTDARAVTLLYQAGAVLLGKLNMHEWALGVTNINPHYGPSRNPWDPSRITGGSSGGAAAALAAGLCMGALGSDTGGSIRIPASLCGIVGLKPTFGRVSLQGVIPLSWNLDHAGPMARTVTDAALLLQAIAGYDPDDPVSVALPVDNLLATLDAGVTGWRIALATDAHFGEADPEVISAVRRAATVFEELGARVEAVDLSQGREAAQMNALMTTSDAAAFHRDRLRDHPHRFGADVLARMERGAQFTSTEYILARRFQSEWRRRLERLFDQFDLLLTPATPITAPVIEGLDSIEAARQLTRCTAPFNLAGLPALSLPCGLSAAGLPIGLQIVAAPWNEARVLRAGRAFENATQWHRQTPPGW
>NC_009523.1|WP_011957791.1|3877728_3878610_+|DUF72-domain-containing-protein
MTSTSDQPRFYLGCAVWAHPSWSGVLFPRNARSADYLRLYSRRLTTVEGNTTFYATPSAETVRRWADETPPSFRFCFKLPRDVSHQGPLMARMRETETFVQRMAPLGERLGPFFLQLPPGYTPRQIDDLAAWLQAWSPAIPLAVEVRHSDWYTPQEEAALMALLERHGVGRVLMDVRPLDLGPLPGADDDLRRARDNKPDVPLHPLRSASFTLIRYIGHPDVARNDPLLDEWAARLRTWIAEGTTVFFFMHCPVERESPLLCRALQRRLEGAPGVPPLPWDSATDDGEQLSLF
>NC_009523.1|WP_041333867.1|3878975_3879203_+|hypothetical-protein
MSENDDDDLHRELAHCQERLLRIEQDLALLGWLPTSYAWTLIEQLHHEHARCAWLWRLIGVSDRNASRDERRSRR
>NC_009523.1|WP_011957793.1|3879288_3880593_+|ABC-transporter-substrate-binding-protein
MQRVSRWITLLLLATALIACSGQQTAAPTPTNALQAPTSAPTIAPTAAPPAEPTAAPTVAAPSAPAANLTEGCVTDYDPEIDYFPEKVTLSDSVGWTIEYFNNYKVITVLNPWRNADVQFRYVLVQCGTPPPTETGDALVIEVPVNSIITMSTTHLPHLSELGVLDTLVGVDSFLYINNPDVRKKIEAGELVEIGGGGQVNVEQALDLQPDLIMTYGVGNPEYDAHPKLLEANLKVVLNSEYMETSPLGRAEWIKFTAAFFNREAKATEVYNTIVSRYKEIAAKARNVATRPTVFGDAPFQGTWYMPGGRSYVAQLLADAGADYLWADDTSTGSQPLSFEEVFERARNADFWLNPGSWKSLSEIKAADERLTGFAAFQNGNVFNNNKRLNENGGNDYWETGVTNPHLVLADLIKIFHPELLPDHELYFYQQLTP
>NC_009523.1|WP_011957794.1|3880601_3880946_+|ferredoxin
MQKPHMNRYARHIFICTGRFCDPQGQAIHLYALLARLLGPLGRYENPCRVKRGTTPCLGVCSGGPIAVVYPDGIWYHHVDEGALERIVHEHLEQNRPVEEYIFHRLFTDETESR
>NC_009523.1|WP_011957795.1|3880960_3882076_+|iron-ABC-transporter-permease
MAQKRSITDTFREPVTPTPIASWPRLGLRPLALAAMCGVMILAFLLSLSFGSVRIPLEQVLTILLGGQAERASWTTIIYDFRLPKALTAALAGAALGVSGLQMQTLFRNPLADPFVLGVSSGASLGVALVVLSVGVANTTLLAVTGLIGNLSLAAAASIGAGAVLALVLTLAQRVQNSVTLLILGLMIGYIAGAIVSLLLYFSIAERIQAYIAWGFGSFGGVTWSRMHVLAPVVGIGLLLALILTKSLNALLLGEAYARSLGVDIRRARTGIVASSALLAGAVTAFCGPIAFLGIAIPHLCRALLRSADHRLLIPACILVGATTALLADLFAQAPGMSVVLPLNAITALIGAPTVIWILLRRGVERGTFGV
>NC_009523.1|WP_011957796.1|3882072_3883095_+|ABC-transporter-ATP-binding-protein
MSRAILATEHLSIGYAPRRGPRRIVASNLNLTLHAGEVVCLLGPNGVGKSTLLRTLVGMQPPLDGRVWLDGVDLSTLSAREIARRVSVVLTERVEVGQLTVYALVALGRHPHTDWTGRLTPHDEAIVRQALEAVNAVNLAGRLVHELSDGERQRVMVARALAQEPLVVVLDEPTAFLDLPRRVEIMRLLRRLAHETQRAMILSTHDLDLALRSADLLWLMAPGGGVHAGAPEDLVLGGAFEATFATEGISFDRHEGHFRIHPPTQRRIALMGDGVVREWTARALERAGYAAVTPDEPVELRITVTGDGYQPCWEVRRNGDAPQHVQTLRDLVALVRRIEG
>NC_009523.1|WP_011957797.1|3883180_3883756_+|hypothetical-protein
MTAALEPRIVEEPGNGTLEIFPLEPKEETLVALMTEFFRDHWDKIHFGPLIQGSVFEIKATAPPTKIGMLDGYLTVDFGAWHFHICIGEHKGSKNKPVDPELARHRRTARAEFYRRLNPDGTVGSWGFRLFNGKDENQIYIFLPNPFLSDDMRFLKQPDWSRLALWDDLRQRYLGLPPDPRDRSGKTMFHG
>NC_009523.1|WP_049767607.1|3883775_3884603_-|ABC-transporter-substrate-binding-protein
MIVHDALGRRLDVKHPPQRIVSLVPSLTEWLFTIGLGARVVAVTDYCIEPAAALAGVPRIRGTKNPDRARIVALQPDLVIADQEENRARDVQALTAAGIPVYVTAIRSVADVPVQFEQLAAVLGASDQAAPGLAALRQALKATDRRPTRRIPTLTFIWRDPWMAVGAETYAGDLLERCGAENLGRRLPGRYPRAPLETFMRLQPEVILLPDEPYAFSQRDFDAFEVYHDVPAVRDGRVLLCDGMALTWPGLRALAALRDIAALIDPDTRGCDAPD
>NC_009523.1|WP_011957799.1|3884608_3885004_-|acyl-CoA-thioesterase
MSAADRAETRMVFPVFPVDTNHYRTLFGGKAVAWIDQAAFICATRWCRRKVVTVRISEVNFHHPIREGSIVEVIARLVRTGRSSMQIAVDVWWEPMDYEERVLACQATCVLVALDDNNRPVAVPPLTETMS

Crispr_ID: NC_009523_73

• CRISPR_ID: NC_009523_73
• CRISPR_location: 3969053-3969203
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009523_73

Consensus_repeat	Method
GCGTCGCTTCCCCTGGCCAGGAGATTTAGC	CRISPRCasFinder

spacers of NC_009523_73

>73.1|3969083|30|NC_009523|CRISPRCasFinder
CCGACGGCGCACACCAGCCCGCACAGGCTG
>73.2|3969143|31|NC_009523|CRISPRCasFinder
GATCGGCAGCAGCGTCGGCGCGACAATCCCC

CRISPR arrays and Neighbor proteins around NC_009523_73

CRISPR arrays

The CRISPR arrays of NC_009523_73

>merge|NC_009523|73|3969053-3969203|CRISPRCasFinder
GCGTCGCTTCCCATAGCCGAGGGGTTGACCCCGACGGCGCACACCAGCCCGCACAGGCTGGCGTCGCTTCCCCTGGCCAGGAGATTTAGCGATCGGCAGCAGCGTCGGCGCGACAATCCCCGCGTCGCTTCCCCTGGCCAGGAGATTTAGC

>NC_009523|73|70|3969053-3969203|CRISPRCasFinder
GCGTCGCTTCCCATAGCCGAGGGGTTGACC	CCGACGGCGCACACCAGCCCGCACAGGCTG
GCGTCGCTTCCCCTGGCCAGGAGATTTAGC	GATCGGCAGCAGCGTCGGCGCGACAATCCCC
GCGTCGCTTCCCCTGGCCAGGAGATTTAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_083763312.1|3955611_3957372_+|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223377
NC_009523.1|WP_011957848.1|3953465_3954083_+|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl|CDD|223632
NC_009523.1|WP_011957868.1|3984180_3985170_+|dihydrodipicolinate-reductase	unknown	unknown	gnl|CDD|226326
NC_009523.1|WP_011957851.1|3957368_3958484_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224983
NC_009523.1|WP_011957859.1|3969286_3971296_-|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl|CDD|234792
NC_009523.1|WP_011957856.1|3964351_3965233_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009523.1|WP_011957853.1|3959958_3962172_-|DUF3488-domain-containing-protein	unknown	unknown	gnl|CDD|376628
NC_009523.1|WP_157041116.1|3963540_3964368_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|223472
NC_009523.1|WP_083763311.1|3954886_3955765_+|TVP38/TMEM64-family-protein	unknown	unknown	gnl|CDD|223475
NC_009523.1|WP_011957863.1|3978063_3979314_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333916.1|3981262_3982648_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl|CDD|235392
NC_009523.1|WP_011957860.1|3971408_3973088_+|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|234861
NC_009523.1|WP_011957857.1|3965353_3966994_+|polymerase	unknown	unknown	gnl|CDD|377422
NC_009523.1|WP_011957867.1|3982756_3984109_-|response-regulator	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011957861.1|3973268_3976451_+|glycosyl-hydrolase	unknown	unknown	gnl|CDD|374209
NC_009523.1|WP_011957854.1|3962181_3963465_-|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270303
NC_009523.1|WP_157041117.1|3979551_3979830_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957862.1|3976595_3977633_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|235640
NC_009523.1|WP_011957852.1|3959461_3959881_-|hypothetical-protein	unknown	unknown	gnl|CDD|236975
NC_009523.1|WP_157041343.1|3979934_3981257_-|DUF58-domain-containing-protein	unknown	unknown	gnl|CDD|224635

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_083763312.1|3955611_3957372_+|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	3.19637e-50
NC_009523.1|WP_011957848.1|3953465_3954083_+|CDP-alcohol-phosphatidyltransferase-family-protein	gnl|CDD|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	9.18898e-11
NC_009523.1|WP_011957868.1|3984180_3985170_+|dihydrodipicolinate-reductase	gnl|CDD|226326	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown].	4.71622e-53
NC_009523.1|WP_011957851.1|3957368_3958484_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	1.20069e-46
NC_009523.1|WP_011957859.1|3969286_3971296_-|excinuclease-ABC-subunit-UvrC	gnl|CDD|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NC_009523.1|WP_011957856.1|3964351_3965233_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.52361e-69
NC_009523.1|WP_011957853.1|3959958_3962172_-|DUF3488-domain-containing-protein	gnl|CDD|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	7.31537e-21
NC_009523.1|WP_157041116.1|3963540_3964368_-|ABC-transporter-permease-subunit	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.93888e-53
NC_009523.1|WP_083763311.1|3954886_3955765_+|TVP38/TMEM64-family-protein	gnl|CDD|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	3.31189e-26
NC_009523.1|WP_041333916.1|3981262_3982648_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl|CDD|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NC_009523.1|WP_011957860.1|3971408_3973088_+|dihydroxy-acid-dehydratase	gnl|CDD|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NC_009523.1|WP_011957857.1|3965353_3966994_+|polymerase	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	1.19202e-14
NC_009523.1|WP_011957867.1|3982756_3984109_-|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.64188e-24
NC_009523.1|WP_011957861.1|3973268_3976451_+|glycosyl-hydrolase	gnl|CDD|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	6.61613e-12
NC_009523.1|WP_011957854.1|3962181_3963465_-|sugar-ABC-transporter-substrate-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.51818e-96
NC_009523.1|WP_011957862.1|3976595_3977633_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	9.96169e-113
NC_009523.1|WP_011957852.1|3959461_3959881_-|hypothetical-protein	gnl|CDD|236975	PRK11770, PRK11770, YccF domain-containing protein.	1.2153e-05
NC_009523.1|WP_157041343.1|3979934_3981257_-|DUF58-domain-containing-protein	gnl|CDD|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	3.37054e-36

Protein sequences

>NC_009523.1|WP_011957857.1|3965353_3966994_+|polymerase
MKQLNAVPFLMPLILFVTGGLLGTLVACDPEQSLPWMLTLTLGIILYLGIVTFLRNRLMSVAAGIGAWSISYGVLLAVQYRHLGFHEKLGLSAWLGRLTSAPFPDVTPVFIDANAAASFLAPALPLIVGIALSVHGAQRKAWSVGAALVAFGVLLTSSRGAFVALIAAGLLWGLVRLQRYAQDSDARIPRSIWRSLVVAGAAGIGLIALLVNLPATQDALASAALRAADRLAVYRNSFFLALDFPFSGIGPGAFGPMYSRFQLLILPTFISYAHNLFLGVWLAQGIVGLIGFAWLLIASFRRTAPILHAQTPLVQGAAIGCVVLLIHGLSDAPQYDTSWTTMLLAFGLFSIVAAAPHQPVDIPARAARRPNPHRRRQVGITIAAVALVLIVSGPHLAAAGAVNYAAWLQSRAMLADELTQKERTTLMHDAVTWINYGLQIAPASPLVQKRLGMLALDLGDYPRAINALEQAQTWFAADQATHKALGMAYVWHGEPDRGARMLAHLDQASEVREELAIWVYAWRERGRDDLAAYAKRAAEVMTEAPR
>NC_009523.1|WP_011957856.1|3964351_3965233_-|sugar-ABC-transporter-permease
MRTHTRYRLSLYLLLTPFLAGITLLVVIPAGLSFALAFTSYDALSPPVWRGVQNYRHLLADDLFRRAVVNSLTFLALTVPLRTLITLGLALLLRRPRRGIRFYRAAVYMPTVIPGVAYALIWLWILNPVYGPLNLVLGALNLPTAAWLVDPRTALPALALAALFQIGEGFVVLLAGLQHIPDDYYDAAALDGAGRMALFRHVTLPLLAPWLFLVIIRDIIASAQNTFTPALLMTGGGPYYATLFLPLLIYQTAFDRFRFGEGAAMTTLLFAGVGGLIMLVWRISGGWGYDDSV
>NC_009523.1|WP_157041116.1|3963540_3964368_-|ABC-transporter-permease-subunit
MMIRSERTPWRTAGFHLTALGVSLIFAVPVIWVLAASLRLPGTPPPIDLELIPDPIIWSNYVQIFELLPLGRYLLNSFAVAALAVPLTVVVASWAGFALAQLPEHVRTAFLALAIVVRMTPITALWLTRFLVLNELRLIDSYAALLAPVWLGSSPLFVLIFYWSFRRIPADVIESARLDGLGALAIWRRIALPLARPAIGAVSVLTFVQYWSDFINPLLYLKSESRYTLPIGLRLLQQMDITSWPLLMAGVMVMIAPIMILFVLAQRAFWVEVRS
>NC_009523.1|WP_011957854.1|3962181_3963465_-|sugar-ABC-transporter-substrate-binding-protein
MTLTRRYGLFALFVVVLVACATPPPAPAREITFMVSGDAAEKAAYERLVAAFRERHPTIQVTLIHIPGQSDYRKRLGIDFAAGTPADIVLINYRRYAAFAARGVLEPLGPYLAQSAVISADDFYAEAMTPFIWQGVIMCLPQNLSSLVVYYNRDLFRAAGLPDPSPDWTWNDMLEAAQRLTRDANGDGVVDQYGLGTEVSLFRLAPFIWQNGGDVVDDPQTPTRLTLDTPAAREAIQWFVDLQVKHHVTPDAVAEAAESSESRFLNGRLGMFLNSRRGVPTYRTITDFDWDVAPLPRGKQRAGILHADAYCMAQVSKQKEAAWTFIEFANSVEGQRIIAATGRTVPSLRAVASSPVFLDPHTRPANSRVFLDGIAFIRAVPVMETWVDIEDIVAEELKRAYYGQASVDDVIETAITRTRPFFTRRDR
>NC_009523.1|WP_011957853.1|3959958_3962172_-|DUF3488-domain-containing-protein
MGQFRRIPVQRLDWTLVVLVILAVLAPGFAAIDATLPLSSGAFFWGGIAGSGLGAIVGYRATSCASRRALRIAALTLIWFIGLALLLLSIGQALPALDVAAADICAAISWAWKVAWRDPAAGEPPQTLTLALWRVALFRFRDQLIAAPAGGERGAALMLSVAGATLTWSGAFLTGIAIRTRRTTLTYGLPLLIALGIVAIPGGGSGSPLIIGSGVWLVLAVASDFRRRETMWDAAAIDYSTELFRDMVIWGGLLTAGALFVAWALPLWPGNPLARIFVRDDAIPSGLAVLERSIRRPLPSGGVADIGVPVFAELPLGLSLEQGPPDQLALRVTLSAPLPPAREPRYWRARIFNRYTGDGWGSSARVADEPPVAFPNEPLPGTIMQYVEDLRPQRATLVALPDPLFADIPARAERLRDGSLMALVPVGSGARYRVLSRLPEQAPPPERRQPGGEAVDLGPYLALPTSLPMRVRDLAVVIAGDRQGDEARAQALERYLRNLPYAYEVEPLADGVDGVDHFLFSMRSGYCTYYASAMAVMARALGIPSRLAVGYASGEYDERAGSYLVREADAHAWPELFIAGRWVAFEPTPVRPLPDRGAIAPSPAPVATPVEAAPPDRIRGVLIWLAVLSGVAALTAGGFLLGRRPPRDTPIARAQRDLERCGARAGVEWSPGATIHEYATLVALRAPEIAADLMTLAAILTEARYSNHRLDSAALAQIERALTRLRSWRPTRRSIRS
>NC_009523.1|WP_011957852.1|3959461_3959881_-|hypothetical-protein
MQHQPIVIEQRSGPNLLIRALYFIVFGLWFSGIWAAIAWVLCVTVIGLPLGLWMLNRLPQVVTLAPQRSDLIIASGRAYRADVPQRPFLLRAVWFVLIGWWLSALWLALAWALCASVIGMVVAFWMFDRVPAIITLARR
>NC_009523.1|WP_011957851.1|3957368_3958484_+|NAD(P)/FAD-dependent-oxidoreductase
MITIIGAGPAGLAMAAELTRRNRPYRLIERGRVGEAWHHHYDRLRLHTLKHVSGLPGFPMPSHYPDFPSRAQFLEYLHQYAQHFDLRIEEGIELRRADIDGDRWRLDTSCGEADASVLVMATGIWSAPVRPRLPGEERFAGLILHSRDYRNPHIFRGQRVLVVGAGNSGAEIAVDLAGHGVETAIVVRSGVAFVPRPRSAAGMRLAAWLLRTLPPWLGARLLRRRNFQHLGLPLPPGSPLFHYPVVGYELPQAVARRRVAVYPGVAQIESGSVVFQDGRRAPFDAIILATGYRPALDPVAHLVTCDASGRPVVDRYWRARRHPTLVCIGYTYPTTEGWLQALGRVVRAAAHGIATQADTTLHDRRTAGALR
>NC_009523.1|WP_083763312.1|3955611_3957372_+|SDR-family-NAD(P)-dependent-oxidoreductase
MLRRVVRCWHCDRADAAPQRTAINDSGRVCRLSTCVTTNRGFVGHTGTHTLMVTLHQNRNMSQSVVLITGATDGIGRALTQIYRARGARVLGIGRRPAEEVSPDLRSDYCRVDLAQPFASALVADVLRQRGVARLDRLIHCAGIGSYGAVDDQTPEAIDALLDVNLRAPIALTHALLPLLIAAHGHVTFIGSIAAALPAPNYAVYGATKAALEGFARSLREELRGRVGVQIVHPGATRTGMHAKSGVPPDRVNARRFPSPMWTAERIVRAIERNAAVTTIGSVNRLLRRVGRHAGEIADAVAARQVVAPHHTIGDTTHPPGMLSTGGRRHCVVTGGANGIGRAVVERYARDGWLVTIIDREAPQINRTVQDATTFIQADLAHSEGIDRALRHLAALPAADVVVQSAGINAVGAFAASAIDEQLTVIDVNLRAPLHLTAGLLRFALLAPRATLVFIASLSVYTGYPGAAVYAASKDGLSSYARSLRVALAQRHMNVITVYPGPTRTAHARRYSPDNRRESRRMAPERVAACIATAVERRRARVIPGITNQAIALIGSVAPTLTMYAMRKTLFERLEAVSGDVKAGRP
>NC_009523.1|WP_083763311.1|3954886_3955765_+|TVP38/TMEM64-family-protein
MRTIPAVNCFALHSRIKTGRSMPHQSSAPLHRRDGSLAHHRQTIIASAIWLALAGAFLGYSLSSGASPTETLQAAIDLLRTPFGPLIYILIYTLRPLAFFSAVIVTLIGGAIWGPFWGTLFAIIGSNMSATLAYWFGRAFGSGVLPEGKAGALEGMVGRYTRRLQANAFSAILMMRLIYLPYDLVNYLAGFLRIPYRPYLLGSVIGALPGTLTFTLAGASLALDDILAGRFSISVVNPWTLACSAGLFVAGIVIARMLRRKEQQLTTLVVSADSPHASPPTEDSSGTLERIP
>NC_009523.1|WP_011957848.1|3953465_3954083_+|CDP-alcohol-phosphatidyltransferase-family-protein
MIDKTLRESKDALFTWLVRGPVRQIHPAVVTVLAAVVGVAAAVAAWQSAYVAAVCLWLMNRALDGLDGAIARVTGTQSDLGAYLDIMLDYVVYAAIPLGLALASGESAVLLALAVLLGSFYLNSASWMYLAAMLEKRNAGAASRGETTSVTMPAGLIEGAETIVFYTLFLLFPNALVLLFSLMATLVLVTASQRVGWALWHMKDG
>NC_009523.1|WP_011957859.1|3969286_3971296_-|excinuclease-ABC-subunit-UvrC
MPDLTHTAIADPTAFEERLRAVPLAPGVYLWKNAQGKIIYVGKSKRLRDRMRSYFNQTGDPYGKTARLVEQIADFQVIVTSTELEALLLEMTLIKQHRPRFNVLLKDDKSYPYIKVTLHETWPRIFATRNPRWEEGARYFGPYSSAGAVYRTLDQLNRLFAFRPPSRCPDDKFNRHRRMGKPCLYYDIKRCLGPCVPGLVNQEEYRATIESVCRFLEGKSDLVVKTLRRQMEEAAERLDFERAARLRDSIRDIELISQRQQVLRHDDADQDVIGLAREEGMAVVQVLCIRAGKLISAESFPLQNAEGERNEDLLASFLTQFYDTAAELPAALLLPMPLDEPAVIEQWLAQKAGRKITLHTPQRGEKRRLVELAEQNARQKLEELRLQWLNSEQRAVAGLSEVRDLLGLSALPTRIECFDVSNIQGSHAVGAMVVFERGEPKKSRYRKFRIKTVQGANDVASIQEILRRRFRRAAMVIGEEEQQSEAQRMNGSVNGPAEADDQEEAEKTDTPGSHADIERQETWAELPDLILIDGGVGQLNGAIQALRDLRFDHIPVVGVVKGPNRDRFDLLLPGASDVIVLERDSAALRLIRMIDEEADRFAKDYHRKLRSKSATSSRLEEIPGIGPKRRQLLLKRFGSLEGIRNATVDELAAVPGMTRKAAEELKSML
>NC_009523.1|WP_011957860.1|3971408_3973088_+|dihydroxy-acid-dehydratase
MSSDLKRRSRTITDGRTRAGARAMLKAIGFTDEDLAKPIIGIANTWIETMPCNINLRALAARVKEGVRAAGGTPMEFNTVAIADGVTMGTEGMKASLISRDLIADSIELMGRGYMFDAIIALVACDKTIPGAAMGLTRLNIPGFLLYGGSIAPGHWRGKEITIQHVYEAIGAVAAGKMTDEELKEIEDAACPGPGACGGQYTANTMATVMEIIGLSPMGTAAVPAADPRKDSVGYRAGQLIMDVLRRDLKPRDILTRAAFENAIASVALTGGSTNAVLHLLALAREAGVPLTLDDFDAISRRTPLCCDLMPSGKYSAIHVDQAGGIQVIARRLVDGGFAHGDAITVTGRTLAEEAADAVETPGQDVIRPLDNPIKPTGGLLVLRGNLAPEGSVVKLFGYERTYHRGPARVFDGEEAAMAAIVGGEIRPDDIVIIRYEGPRGGPGMREMLGVTSAIVGAGLGQSVSLITDGRFSGATRGVMIGHVAPEAARGGPLAIVQEGDEIEINLDERRVDLLLSEEEIADRLLAWQPPAPRYEWGVMARYGALVSSASEGAVLVTP
>NC_009523.1|WP_011957861.1|3973268_3976451_+|glycosyl-hydrolase
MSFPTDFTGLLEWRCIGPFRGGRVVAVAGDPRDIGTFYFGACAGGVWKSVDGGMYWECVSDGFFNTAAIGALAVSDSDPNVLYAGTGETTIRIDVSHGDGVYKSVDAGKTWKHVGLTDTRFIGKIRIHPHNPDIVWVAALGHAFGPNDERGVFKSIDGGATWRRVLFKSDKAGAVDLSLDPNNPRFLYAAVWEAYRSFWQISSGGPDSGLWMSSDGGETWTDITDRPGLPKGLKGKMAVAASPARSGRVWVLIEHAKEGGLYRSDNYGDTWEKVSDNQNLISRAWYYMHLTPDPLDSETIWVNNLSLWKSTDGGRTFVEVATPHGDNHDLWIDPRNNRRMIQGNDGGACVSFNGGESWSTIYNQPTAQFYHLAVDNRKPYVVYGTQQDNSSIAVPARSRHGGILWGDCWIAGTGESGYIAVRPDNPDIVYVGAIGSSPGGGNCLQRYDHRVRQIRLITTWPEYMGGYGAIDHTYRFAWTYPIVISPHDPNTLYIGGNMIFRTTDEGQNWEAISPDLTRADPATLQPTGGPINRDSIGAEVYATVFAFIESPHERGVFWAGSDDGLIHLSRDGGLTWQNVTPPELPEWTLISCIEPSPFDAATVYVAATRYKLDDYHPYLYKTTDYGATWQRIDAGIPAHDFTRVIRADPVRRGLLVAGTETGLYLSFDDGASWMRFMLNLPVAPVHEILIKDSDLIVGTHGRSIWILDDITPLRAMTADILDAPVHLFAPRTSERILPGIDWSGNNPGKEYLSSTGGAFINEKQPDGAIKRRYLDVGQNPPKGVIVTYYLKETPAEAITLSFFDARGELVRRFRSKPPESADGEKKKDDKEPKIPAKAGWNRFVWDMRHAPAPRIEGKDPPADMVIEGPFVAPGAFRVTLKAGDAETAQEFVIVQDPQSTATQEDLEAQHDLAMRIHQTLSTVVQTINRMRDLRAQLDGWAKRAETLPDGAPVAAQAKALRERVLEIEQHLLVPDLRPGWADNLNHGVRLLEKLMNVAEVVQPGDYRPTSAAEAAFQDLAARIAVQTAHFEALIESDLPALNAAIAGAGFGAIMLPVPST
>NC_009523.1|WP_011957862.1|3976595_3977633_-|sigma-70-family-RNA-polymerase-sigma-factor
MNQVQTRANDQHRVEDDPGAEEIDSFWLTDISDLDEKRLSRSETIDDSTQMYLREIGQVSLLSAEEEITLANDIRAGREAQERLKSHRFESLAERLLLERRVMQAEEARRRLIQANLRLVVSIAKKYIGGPLSFMDLVQEGNIGLMRAVEKFDAGKGNRFSTYATWWIRQAITRAIAEQSRLIRLPVHLSDVIAQLRRVARRLEQSLEREPTVEEIAAAIDMPEHKVKLLLQASAQPISLEQPITSDGEGQISELLADDDADAPMEIATRRMLQHDLAQALMELPDRERAVLQLRYGLTDGRRRTLEEVGSAFGITRERTRQIEADALRQLRRPGIGARLQAYLE
>NC_009523.1|WP_011957863.1|3978063_3979314_+|hypothetical-protein
MSRTSTERLLQQQIQTLFPRLSRHRRRALARWVLGALLAGSANRPALVHALATAGIARAATLADAWDAWIAAPAHRIDTADPPAAGAPPVVSPLACGADLLRWIRAHWTGGPLVLGLDASHRRDDVVLLRMSVLYRGTALPVAWVIVPANQPGAWEPHWERMLRWARSALPLDQEVLVLADQGLWSPRLWHAIRSQQFHPIMRVRTTSTFAPTGQARQSVLRLAPGPGHGWVGVGVAFKHAPKRIAGTLAVAWGADHAEPWVLLTDLPPAQVDAAWYALRSWDEAGFRQSKSMGWDWQRGQVTDPDAVAWQYLVVATVTLWTVAVGTRIEDAEQQGVPPGRLKRAPPTTGAPPRRRWSGTAQRVISLLRRGMQHLRWLLAQGRCWVRLWLRPEPLPKIGDSVTMHIYDPSQCLKSP
>NC_009523.1|WP_157041117.1|3979551_3979830_-|hypothetical-protein
MTARCAGASVRQPAGVTTQTRRAAGMLRQAHVSGDVADGFLSISSRYALFQGQARVSGDVADGADGRGGAGVSRYAAAQGCRPNKQVVPVYL
>NC_009523.1|WP_157041343.1|3979934_3981257_-|DUF58-domain-containing-protein
MQWQRLERSLRPLSLVLLAALIFIAAQGTGIELFFHLSYLLISIVVVAYLWAWLNLHGLSVRRETFSHRAQVGDVARERVTLINHWFLPRLWVEVLDHSNLPSHGAGFVACLPGNEQQRWVVRTPCTMRGKFRLGPVTLASSDPLGLFRLQRDIAGATDILVYPRTVPLPEFVLPGAELPGGQNLRRRTHHVTPNVAALREYQPGDSFNRIHWRSTARLGRLMVKEFELDPTAEVYILLDMNEHAQQALRQAEAMPVARDQRTAESTEEYAVHAAASVARHVLDQNRAVGLIAWGQHREVIPPEREVRQLYKILEALAELRAYGATSLAEVLSAESVRFGRNCTLVVITPSLDERWVTGVQHLLYRGVRIVAILIDAHSFGGGRSNQTIRMRLAELRVPTYVYGRGQALAAALARPAPGDQQHVDGMPRRDDLVRPHRAG
>NC_009523.1|WP_041333916.1|3981262_3982648_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MLYDDTIAAIATPPGEGGIGIVRISGRDALKILERIFVPVRPGRWKPYQMRYGRVVDQNGAVVDEALAVFMRGPRSFTAEDTAEISVHGGPLVVERVLQQALAAGARAAAPGEFTMRAFLNGRIDLAQAEATLDIITARTTTALALAEAQLGGWLSQELHRIRDLLMDPLAYCTALVDFPEDEVDPQDIETPLTAAVQALDALVASAQHGIIYRQGARAALIGRPNAGKSSLLNALLRVDRAIVTPIPGTTRDTLEETASLGGVPVVLTDTAGIVESDDPVERLGVARSRQAVRLADLALLVVDVSLPVADDDREIVALTEEKRTILTLNKIDLIDADRSIIAARQREYEQIRGKAFDAMVTVSALTGQGLDELGATVARLLLGAPIAADGRLVTNARHRDALARAADHARDALTGFQQGVSPDLLAVDLTAAINAIGEVTGESVGEDLLHAIFSRFCIGK
>NC_009523.1|WP_011957867.1|3982756_3984109_-|response-regulator
MKTPTILIIDDDVVLLARLATQLKDAGYETIQATSVRQVEYVLDSATVDLALLEPAIDRQAGWEFLPRLAARTPTIVISGDGLEEDVVRGLDAGAVDYLTKPFRTGELLARLRAHLKSRSTHEIVPSQDTSSTTPTASAASPATASRVIDLGDDDDIADDATAAVANTHDRHSDSGGSTKRLRRARPSDDEEEAVFIPHAEERGLIADHTSMPVDELRVAELERLPLGARLHAARQRRRITLVQAELDTKIRMSYIQAMEEEKFSLLPHGAMTEAMVKTYAAYLGLNVTHALEEYRQRHYTAPVEPLFALGGTSLPRSAPPWWVWAAVVLLALVIGIGGILAIDPAGVAALGERARMLFVPPTATPTPTLTPTFSPTATFTPTATPSPTPTSTATPSPTAEPTATLEPTATPSPTARPRPTVRPQPTLAPPTPEPPTPEPPTPEPPPVQP
>NC_009523.1|WP_011957868.1|3984180_3985170_+|dihydrodipicolinate-reductase
MATRVVCYGLGPIGLSIARLACARSGIQVVGAVDIDPQKAGRDLGELLGIGATGISVSADAATTLRNTRPNVVLHATLSSLAAVVPQLQECIAAGADVISTCEELAYPWSAQPQIAADLDAAARAAGVTLLGAGVNPGYAMDALPVMLTAVCAGVRAIRVLRIVDAAQRRAPLQRKIGAGLTPDEFAQRVHEGTVRHVGLPESLHMIAATLGWQLDAGDDTIMPVLAERAIATEHVSVAVGQVAGVRQIARGYVGEREVIALELQMYVGAPNPQDTVEIDGDPPLRMTIPGGIHGDSATAAIAVNAIASIRRAESGLLSMTDIPLVHYW

Crispr_ID: NC_009523_74

• CRISPR_ID: NC_009523_74
• CRISPR_location: 3979642-3979748
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_74

Consensus_repeat	Method
TCCATCGGCAACATCACCCGACACGCGCGCCTGCC	CRISPRCasFinder

spacers of NC_009523_74

>74.1|3979677|37|NC_009523|CRISPRCasFinder
CTTGGAAGAGCGCGTATCGCGAAGAGATTGAAAGAAA

CRISPR arrays and Neighbor proteins around NC_009523_74

CRISPR arrays

The CRISPR arrays of NC_009523_74

>merge|NC_009523|74|3979642-3979748|CRISPRCasFinder
TCCATCGGCAACATCACCCGACACGCGCGCCTGCCCTTGGAAGAGCGCGTATCGCGAAGAGATTGAAAGAAATCCATCGGCAACATCACCCGACACGTGCGCCTGCC

>NC_009523|74|71|3979642-3979748|CRISPRCasFinder
TCCATCGGCAACATCACCCGACACGCGCGCCTGCC	CTTGGAAGAGCGCGTATCGCGAAGAGATTGAAAGAAA
TCCATCGGCAACATCACCCGACACGTGCGCCTGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957869.1|3985175_3985955_-|DUF3623-domain-containing-protein	unknown	unknown	gnl|CDD|372016
NC_009523.1|WP_011957872.1|3989172_3989769_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041333916.1|3981262_3982648_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl|CDD|235392
NC_009523.1|WP_011957868.1|3984180_3985170_+|dihydrodipicolinate-reductase	unknown	unknown	gnl|CDD|226326
NC_009523.1|WP_011957859.1|3969286_3971296_-|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl|CDD|234792
NC_009523.1|WP_011957860.1|3971408_3973088_+|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|234861
NC_009523.1|WP_011957856.1|3964351_3965233_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009523.1|WP_011957853.1|3959958_3962172_-|DUF3488-domain-containing-protein	unknown	unknown	gnl|CDD|376628
NC_009523.1|WP_157041116.1|3963540_3964368_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|223472
NC_009523.1|WP_011957863.1|3978063_3979314_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957871.1|3987717_3989166_-|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl|CDD|319889
NC_009523.1|WP_011957857.1|3965353_3966994_+|polymerase	unknown	unknown	gnl|CDD|377422
NC_009523.1|WP_011957867.1|3982756_3984109_-|response-regulator	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011957861.1|3973268_3976451_+|glycosyl-hydrolase	unknown	unknown	gnl|CDD|374209
NC_009523.1|WP_011957873.1|3990111_3992151_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl|CDD|235362
NC_009523.1|WP_011957854.1|3962181_3963465_-|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270303
NC_009523.1|WP_011957862.1|3976595_3977633_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|235640
NC_009523.1|WP_011957870.1|3986175_3987600_-|BCD-family-MFS-transporter	unknown	unknown	gnl|CDD|349950
NC_009523.1|WP_011957874.1|3992306_3993065_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009523.1|WP_157041343.1|3979934_3981257_-|DUF58-domain-containing-protein	unknown	unknown	gnl|CDD|224635

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957869.1|3985175_3985955_-|DUF3623-domain-containing-protein	gnl|CDD|372016	pfam12291, DUF3623, Protein of unknown function (DUF3623). This family of proteins is found in bacteria. Proteins in this family are typically between 261 and 345 amino acids in length.	5.36915e-82
NC_009523.1|WP_041333916.1|3981262_3982648_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl|CDD|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NC_009523.1|WP_011957868.1|3984180_3985170_+|dihydrodipicolinate-reductase	gnl|CDD|226326	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown].	4.71622e-53
NC_009523.1|WP_011957859.1|3969286_3971296_-|excinuclease-ABC-subunit-UvrC	gnl|CDD|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NC_009523.1|WP_011957860.1|3971408_3973088_+|dihydroxy-acid-dehydratase	gnl|CDD|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NC_009523.1|WP_011957856.1|3964351_3965233_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	6.52361e-69
NC_009523.1|WP_011957853.1|3959958_3962172_-|DUF3488-domain-containing-protein	gnl|CDD|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	7.31537e-21
NC_009523.1|WP_157041116.1|3963540_3964368_-|ABC-transporter-permease-subunit	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.93888e-53
NC_009523.1|WP_011957871.1|3987717_3989166_-|cyclic-nucleotide-binding-domain-containing-protein	gnl|CDD|319889	cd16367, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.1829e-57
NC_009523.1|WP_011957857.1|3965353_3966994_+|polymerase	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	1.19202e-14
NC_009523.1|WP_011957867.1|3982756_3984109_-|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.64188e-24
NC_009523.1|WP_011957861.1|3973268_3976451_+|glycosyl-hydrolase	gnl|CDD|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	6.61613e-12
NC_009523.1|WP_011957873.1|3990111_3992151_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl|CDD|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NC_009523.1|WP_011957854.1|3962181_3963465_-|sugar-ABC-transporter-substrate-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.51818e-96
NC_009523.1|WP_011957862.1|3976595_3977633_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	9.96169e-113
NC_009523.1|WP_011957870.1|3986175_3987600_-|BCD-family-MFS-transporter	gnl|CDD|349950	cd06176, MFS_BCD_PucC-like, Bacteriochlorophyll delivery (BCD) family, also called PucC family, of the Major Facilitator Superfamily. The bacteriochlorophyll delivery (BCD) family, also called PucC family, is composed of the PucC protein and related proteins including LhaA (also called ORF477 and F1696) and bacteriochlorophyll synthase 44.5 kDa chain (also called ORF428). These proteins are found in photosynthetic organisms. Rhodobacter capsulatus LhaA and PucC are implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. PucC may function to shepherd or sequester LH2 alpha and beta proteins to facilitate proper assembly, as well as deliver bacteriochlorophyll a to nascent LH2 complexes. The BCD family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.97174e-131
NC_009523.1|WP_011957874.1|3992306_3993065_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.80367e-16
NC_009523.1|WP_157041343.1|3979934_3981257_-|DUF58-domain-containing-protein	gnl|CDD|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	3.37054e-36

Protein sequences

>NC_009523.1|WP_011957863.1|3978063_3979314_+|hypothetical-protein
MSRTSTERLLQQQIQTLFPRLSRHRRRALARWVLGALLAGSANRPALVHALATAGIARAATLADAWDAWIAAPAHRIDTADPPAAGAPPVVSPLACGADLLRWIRAHWTGGPLVLGLDASHRRDDVVLLRMSVLYRGTALPVAWVIVPANQPGAWEPHWERMLRWARSALPLDQEVLVLADQGLWSPRLWHAIRSQQFHPIMRVRTTSTFAPTGQARQSVLRLAPGPGHGWVGVGVAFKHAPKRIAGTLAVAWGADHAEPWVLLTDLPPAQVDAAWYALRSWDEAGFRQSKSMGWDWQRGQVTDPDAVAWQYLVVATVTLWTVAVGTRIEDAEQQGVPPGRLKRAPPTTGAPPRRRWSGTAQRVISLLRRGMQHLRWLLAQGRCWVRLWLRPEPLPKIGDSVTMHIYDPSQCLKSP
>NC_009523.1|WP_011957862.1|3976595_3977633_-|sigma-70-family-RNA-polymerase-sigma-factor
MNQVQTRANDQHRVEDDPGAEEIDSFWLTDISDLDEKRLSRSETIDDSTQMYLREIGQVSLLSAEEEITLANDIRAGREAQERLKSHRFESLAERLLLERRVMQAEEARRRLIQANLRLVVSIAKKYIGGPLSFMDLVQEGNIGLMRAVEKFDAGKGNRFSTYATWWIRQAITRAIAEQSRLIRLPVHLSDVIAQLRRVARRLEQSLEREPTVEEIAAAIDMPEHKVKLLLQASAQPISLEQPITSDGEGQISELLADDDADAPMEIATRRMLQHDLAQALMELPDRERAVLQLRYGLTDGRRRTLEEVGSAFGITRERTRQIEADALRQLRRPGIGARLQAYLE
>NC_009523.1|WP_011957861.1|3973268_3976451_+|glycosyl-hydrolase
MSFPTDFTGLLEWRCIGPFRGGRVVAVAGDPRDIGTFYFGACAGGVWKSVDGGMYWECVSDGFFNTAAIGALAVSDSDPNVLYAGTGETTIRIDVSHGDGVYKSVDAGKTWKHVGLTDTRFIGKIRIHPHNPDIVWVAALGHAFGPNDERGVFKSIDGGATWRRVLFKSDKAGAVDLSLDPNNPRFLYAAVWEAYRSFWQISSGGPDSGLWMSSDGGETWTDITDRPGLPKGLKGKMAVAASPARSGRVWVLIEHAKEGGLYRSDNYGDTWEKVSDNQNLISRAWYYMHLTPDPLDSETIWVNNLSLWKSTDGGRTFVEVATPHGDNHDLWIDPRNNRRMIQGNDGGACVSFNGGESWSTIYNQPTAQFYHLAVDNRKPYVVYGTQQDNSSIAVPARSRHGGILWGDCWIAGTGESGYIAVRPDNPDIVYVGAIGSSPGGGNCLQRYDHRVRQIRLITTWPEYMGGYGAIDHTYRFAWTYPIVISPHDPNTLYIGGNMIFRTTDEGQNWEAISPDLTRADPATLQPTGGPINRDSIGAEVYATVFAFIESPHERGVFWAGSDDGLIHLSRDGGLTWQNVTPPELPEWTLISCIEPSPFDAATVYVAATRYKLDDYHPYLYKTTDYGATWQRIDAGIPAHDFTRVIRADPVRRGLLVAGTETGLYLSFDDGASWMRFMLNLPVAPVHEILIKDSDLIVGTHGRSIWILDDITPLRAMTADILDAPVHLFAPRTSERILPGIDWSGNNPGKEYLSSTGGAFINEKQPDGAIKRRYLDVGQNPPKGVIVTYYLKETPAEAITLSFFDARGELVRRFRSKPPESADGEKKKDDKEPKIPAKAGWNRFVWDMRHAPAPRIEGKDPPADMVIEGPFVAPGAFRVTLKAGDAETAQEFVIVQDPQSTATQEDLEAQHDLAMRIHQTLSTVVQTINRMRDLRAQLDGWAKRAETLPDGAPVAAQAKALRERVLEIEQHLLVPDLRPGWADNLNHGVRLLEKLMNVAEVVQPGDYRPTSAAEAAFQDLAARIAVQTAHFEALIESDLPALNAAIAGAGFGAIMLPVPST
>NC_009523.1|WP_011957860.1|3971408_3973088_+|dihydroxy-acid-dehydratase
MSSDLKRRSRTITDGRTRAGARAMLKAIGFTDEDLAKPIIGIANTWIETMPCNINLRALAARVKEGVRAAGGTPMEFNTVAIADGVTMGTEGMKASLISRDLIADSIELMGRGYMFDAIIALVACDKTIPGAAMGLTRLNIPGFLLYGGSIAPGHWRGKEITIQHVYEAIGAVAAGKMTDEELKEIEDAACPGPGACGGQYTANTMATVMEIIGLSPMGTAAVPAADPRKDSVGYRAGQLIMDVLRRDLKPRDILTRAAFENAIASVALTGGSTNAVLHLLALAREAGVPLTLDDFDAISRRTPLCCDLMPSGKYSAIHVDQAGGIQVIARRLVDGGFAHGDAITVTGRTLAEEAADAVETPGQDVIRPLDNPIKPTGGLLVLRGNLAPEGSVVKLFGYERTYHRGPARVFDGEEAAMAAIVGGEIRPDDIVIIRYEGPRGGPGMREMLGVTSAIVGAGLGQSVSLITDGRFSGATRGVMIGHVAPEAARGGPLAIVQEGDEIEINLDERRVDLLLSEEEIADRLLAWQPPAPRYEWGVMARYGALVSSASEGAVLVTP
>NC_009523.1|WP_011957859.1|3969286_3971296_-|excinuclease-ABC-subunit-UvrC
MPDLTHTAIADPTAFEERLRAVPLAPGVYLWKNAQGKIIYVGKSKRLRDRMRSYFNQTGDPYGKTARLVEQIADFQVIVTSTELEALLLEMTLIKQHRPRFNVLLKDDKSYPYIKVTLHETWPRIFATRNPRWEEGARYFGPYSSAGAVYRTLDQLNRLFAFRPPSRCPDDKFNRHRRMGKPCLYYDIKRCLGPCVPGLVNQEEYRATIESVCRFLEGKSDLVVKTLRRQMEEAAERLDFERAARLRDSIRDIELISQRQQVLRHDDADQDVIGLAREEGMAVVQVLCIRAGKLISAESFPLQNAEGERNEDLLASFLTQFYDTAAELPAALLLPMPLDEPAVIEQWLAQKAGRKITLHTPQRGEKRRLVELAEQNARQKLEELRLQWLNSEQRAVAGLSEVRDLLGLSALPTRIECFDVSNIQGSHAVGAMVVFERGEPKKSRYRKFRIKTVQGANDVASIQEILRRRFRRAAMVIGEEEQQSEAQRMNGSVNGPAEADDQEEAEKTDTPGSHADIERQETWAELPDLILIDGGVGQLNGAIQALRDLRFDHIPVVGVVKGPNRDRFDLLLPGASDVIVLERDSAALRLIRMIDEEADRFAKDYHRKLRSKSATSSRLEEIPGIGPKRRQLLLKRFGSLEGIRNATVDELAAVPGMTRKAAEELKSML
>NC_009523.1|WP_011957857.1|3965353_3966994_+|polymerase
MKQLNAVPFLMPLILFVTGGLLGTLVACDPEQSLPWMLTLTLGIILYLGIVTFLRNRLMSVAAGIGAWSISYGVLLAVQYRHLGFHEKLGLSAWLGRLTSAPFPDVTPVFIDANAAASFLAPALPLIVGIALSVHGAQRKAWSVGAALVAFGVLLTSSRGAFVALIAAGLLWGLVRLQRYAQDSDARIPRSIWRSLVVAGAAGIGLIALLVNLPATQDALASAALRAADRLAVYRNSFFLALDFPFSGIGPGAFGPMYSRFQLLILPTFISYAHNLFLGVWLAQGIVGLIGFAWLLIASFRRTAPILHAQTPLVQGAAIGCVVLLIHGLSDAPQYDTSWTTMLLAFGLFSIVAAAPHQPVDIPARAARRPNPHRRRQVGITIAAVALVLIVSGPHLAAAGAVNYAAWLQSRAMLADELTQKERTTLMHDAVTWINYGLQIAPASPLVQKRLGMLALDLGDYPRAINALEQAQTWFAADQATHKALGMAYVWHGEPDRGARMLAHLDQASEVREELAIWVYAWRERGRDDLAAYAKRAAEVMTEAPR
>NC_009523.1|WP_011957856.1|3964351_3965233_-|sugar-ABC-transporter-permease
MRTHTRYRLSLYLLLTPFLAGITLLVVIPAGLSFALAFTSYDALSPPVWRGVQNYRHLLADDLFRRAVVNSLTFLALTVPLRTLITLGLALLLRRPRRGIRFYRAAVYMPTVIPGVAYALIWLWILNPVYGPLNLVLGALNLPTAAWLVDPRTALPALALAALFQIGEGFVVLLAGLQHIPDDYYDAAALDGAGRMALFRHVTLPLLAPWLFLVIIRDIIASAQNTFTPALLMTGGGPYYATLFLPLLIYQTAFDRFRFGEGAAMTTLLFAGVGGLIMLVWRISGGWGYDDSV
>NC_009523.1|WP_157041116.1|3963540_3964368_-|ABC-transporter-permease-subunit
MMIRSERTPWRTAGFHLTALGVSLIFAVPVIWVLAASLRLPGTPPPIDLELIPDPIIWSNYVQIFELLPLGRYLLNSFAVAALAVPLTVVVASWAGFALAQLPEHVRTAFLALAIVVRMTPITALWLTRFLVLNELRLIDSYAALLAPVWLGSSPLFVLIFYWSFRRIPADVIESARLDGLGALAIWRRIALPLARPAIGAVSVLTFVQYWSDFINPLLYLKSESRYTLPIGLRLLQQMDITSWPLLMAGVMVMIAPIMILFVLAQRAFWVEVRS
>NC_009523.1|WP_011957854.1|3962181_3963465_-|sugar-ABC-transporter-substrate-binding-protein
MTLTRRYGLFALFVVVLVACATPPPAPAREITFMVSGDAAEKAAYERLVAAFRERHPTIQVTLIHIPGQSDYRKRLGIDFAAGTPADIVLINYRRYAAFAARGVLEPLGPYLAQSAVISADDFYAEAMTPFIWQGVIMCLPQNLSSLVVYYNRDLFRAAGLPDPSPDWTWNDMLEAAQRLTRDANGDGVVDQYGLGTEVSLFRLAPFIWQNGGDVVDDPQTPTRLTLDTPAAREAIQWFVDLQVKHHVTPDAVAEAAESSESRFLNGRLGMFLNSRRGVPTYRTITDFDWDVAPLPRGKQRAGILHADAYCMAQVSKQKEAAWTFIEFANSVEGQRIIAATGRTVPSLRAVASSPVFLDPHTRPANSRVFLDGIAFIRAVPVMETWVDIEDIVAEELKRAYYGQASVDDVIETAITRTRPFFTRRDR
>NC_009523.1|WP_011957853.1|3959958_3962172_-|DUF3488-domain-containing-protein
MGQFRRIPVQRLDWTLVVLVILAVLAPGFAAIDATLPLSSGAFFWGGIAGSGLGAIVGYRATSCASRRALRIAALTLIWFIGLALLLLSIGQALPALDVAAADICAAISWAWKVAWRDPAAGEPPQTLTLALWRVALFRFRDQLIAAPAGGERGAALMLSVAGATLTWSGAFLTGIAIRTRRTTLTYGLPLLIALGIVAIPGGGSGSPLIIGSGVWLVLAVASDFRRRETMWDAAAIDYSTELFRDMVIWGGLLTAGALFVAWALPLWPGNPLARIFVRDDAIPSGLAVLERSIRRPLPSGGVADIGVPVFAELPLGLSLEQGPPDQLALRVTLSAPLPPAREPRYWRARIFNRYTGDGWGSSARVADEPPVAFPNEPLPGTIMQYVEDLRPQRATLVALPDPLFADIPARAERLRDGSLMALVPVGSGARYRVLSRLPEQAPPPERRQPGGEAVDLGPYLALPTSLPMRVRDLAVVIAGDRQGDEARAQALERYLRNLPYAYEVEPLADGVDGVDHFLFSMRSGYCTYYASAMAVMARALGIPSRLAVGYASGEYDERAGSYLVREADAHAWPELFIAGRWVAFEPTPVRPLPDRGAIAPSPAPVATPVEAAPPDRIRGVLIWLAVLSGVAALTAGGFLLGRRPPRDTPIARAQRDLERCGARAGVEWSPGATIHEYATLVALRAPEIAADLMTLAAILTEARYSNHRLDSAALAQIERALTRLRSWRPTRRSIRS
>NC_009523.1|WP_157041343.1|3979934_3981257_-|DUF58-domain-containing-protein
MQWQRLERSLRPLSLVLLAALIFIAAQGTGIELFFHLSYLLISIVVVAYLWAWLNLHGLSVRRETFSHRAQVGDVARERVTLINHWFLPRLWVEVLDHSNLPSHGAGFVACLPGNEQQRWVVRTPCTMRGKFRLGPVTLASSDPLGLFRLQRDIAGATDILVYPRTVPLPEFVLPGAELPGGQNLRRRTHHVTPNVAALREYQPGDSFNRIHWRSTARLGRLMVKEFELDPTAEVYILLDMNEHAQQALRQAEAMPVARDQRTAESTEEYAVHAAASVARHVLDQNRAVGLIAWGQHREVIPPEREVRQLYKILEALAELRAYGATSLAEVLSAESVRFGRNCTLVVITPSLDERWVTGVQHLLYRGVRIVAILIDAHSFGGGRSNQTIRMRLAELRVPTYVYGRGQALAAALARPAPGDQQHVDGMPRRDDLVRPHRAG
>NC_009523.1|WP_041333916.1|3981262_3982648_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MLYDDTIAAIATPPGEGGIGIVRISGRDALKILERIFVPVRPGRWKPYQMRYGRVVDQNGAVVDEALAVFMRGPRSFTAEDTAEISVHGGPLVVERVLQQALAAGARAAAPGEFTMRAFLNGRIDLAQAEATLDIITARTTTALALAEAQLGGWLSQELHRIRDLLMDPLAYCTALVDFPEDEVDPQDIETPLTAAVQALDALVASAQHGIIYRQGARAALIGRPNAGKSSLLNALLRVDRAIVTPIPGTTRDTLEETASLGGVPVVLTDTAGIVESDDPVERLGVARSRQAVRLADLALLVVDVSLPVADDDREIVALTEEKRTILTLNKIDLIDADRSIIAARQREYEQIRGKAFDAMVTVSALTGQGLDELGATVARLLLGAPIAADGRLVTNARHRDALARAADHARDALTGFQQGVSPDLLAVDLTAAINAIGEVTGESVGEDLLHAIFSRFCIGK
>NC_009523.1|WP_011957867.1|3982756_3984109_-|response-regulator
MKTPTILIIDDDVVLLARLATQLKDAGYETIQATSVRQVEYVLDSATVDLALLEPAIDRQAGWEFLPRLAARTPTIVISGDGLEEDVVRGLDAGAVDYLTKPFRTGELLARLRAHLKSRSTHEIVPSQDTSSTTPTASAASPATASRVIDLGDDDDIADDATAAVANTHDRHSDSGGSTKRLRRARPSDDEEEAVFIPHAEERGLIADHTSMPVDELRVAELERLPLGARLHAARQRRRITLVQAELDTKIRMSYIQAMEEEKFSLLPHGAMTEAMVKTYAAYLGLNVTHALEEYRQRHYTAPVEPLFALGGTSLPRSAPPWWVWAAVVLLALVIGIGGILAIDPAGVAALGERARMLFVPPTATPTPTLTPTFSPTATFTPTATPSPTPTSTATPSPTAEPTATLEPTATPSPTARPRPTVRPQPTLAPPTPEPPTPEPPTPEPPPVQP
>NC_009523.1|WP_011957868.1|3984180_3985170_+|dihydrodipicolinate-reductase
MATRVVCYGLGPIGLSIARLACARSGIQVVGAVDIDPQKAGRDLGELLGIGATGISVSADAATTLRNTRPNVVLHATLSSLAAVVPQLQECIAAGADVISTCEELAYPWSAQPQIAADLDAAARAAGVTLLGAGVNPGYAMDALPVMLTAVCAGVRAIRVLRIVDAAQRRAPLQRKIGAGLTPDEFAQRVHEGTVRHVGLPESLHMIAATLGWQLDAGDDTIMPVLAERAIATEHVSVAVGQVAGVRQIARGYVGEREVIALELQMYVGAPNPQDTVEIDGDPPLRMTIPGGIHGDSATAAIAVNAIASIRRAESGLLSMTDIPLVHYW
>NC_009523.1|WP_011957869.1|3985175_3985955_-|DUF3623-domain-containing-protein
MPDISPVFTRYLVPLLYALVLWWVSTAIIILLYRLPQRTYRLSFAALTAVGLASLYGVWLARDDTGMLGAYLGFTCGTLLWGWQLAGFYMGFVTGPRQEPLVWHPSSFVRFGQAVHASLHHELAALAGAVVVAALSWDAANQTGWWTYLLLWLMHLAAKINIFLGARNFHAGLLPDHLRHLGIFFRYRPMNLFFPLSVTAAVVVATLLARWALHPDATDFEAVVGTLLSFLTLLGLLEIWLLMTPPVGAMWGERRVDVG
>NC_009523.1|WP_011957870.1|3986175_3987600_-|BCD-family-MFS-transporter
MATGSQGVSGLAQRVSGWFSDHQAIAWWTNVLRLGLFQLGMGVALAPITGTLNRVLIGDMHISAALVASLMAIHYFVSPVRAVFGYRSDVERARGRWRMPYVALGLMLTYGGLATAPFSLILLGPNDSMPFAIALIICTAIFLAYGVGVNIVETTYLALVSDITPPRDRGKVLAVLWMMLVVGTIVSSIIVGAILERYSPVLLIQVMQGSAVIFAVLATISLLGREQLRPDGTLVNHTDDIRVRLTLVEQLRVVWQQPGLRALFVVLFGGTLALATHDVLLEPYGGQVLGMSVAATTRLTALWGVAMIIGITAAGLALWRGYSPIGVIIGGCISGALGFLVVILAGGSVDVNMFRGGVVFIGIGRGLFIVGSVALIMALADRAHAGLFIGLWGVTQALAQGFGTVGGGLARDIAQQQTGSILLGYTSVYAAALVILLLTLGLIMVLRLGRQLREGAVRSPWSGLQDLPGDQILF
>NC_009523.1|WP_011957871.1|3987717_3989166_-|cyclic-nucleotide-binding-domain-containing-protein
MGAKTAPFDQQRMPASSSDTAVRYRERRQQQTQALAQLDCLKGVTPDTLARLAACATLRAFVPGAIIVNEQRPIAFLSFILRGSVSLTLHDRAGRQVLIGVLSRGDCLGVATLFGDRFRGATVRAETVCYLVQVPLTEVRAMLPGSPELERALRQIYQQRLVEGTLGRVPLFSRLSPAERIHIARVLRPMQYSRGAIVLRQGAIGDALYIVMSGQVVIEQNGQVIAYLEEGDFFGEMSLLTHQPHNADVRALTPVEALALPVQDLEALLASRPELAMQLREVVEQRKAASRAIRSDAERQAQLSAILEHGLRRGTHILVRDLSLCKPGCRICEDACASRHGAGRIHFSGLTLNGIEIADACRQCRVGAECVEACPEDAIVWNESGALFITDACNGCGACVPACPYHAVDMRSIAPPHQSPLWGLWQRLQRWRMPVIPLETDHQTQQRANKCDLCHGYNDLACVSACPTGALRLVSVEEVFPL
>NC_009523.1|WP_011957872.1|3989172_3989769_-|hypothetical-protein
MCYNEHVMNRCAAQHTGVLLRVPLCVACVVLMLIGCTTVPATEEPQAGGGFSPEVVTESFFEDLQRALQDPNLQQEETRSFWAERLSGYFAPAERDTQRLALRRALASFATGLRQLADDETAIFEFRGFEPVEKIADDGERALVRLPSATISMMLMRTNERGSYVFYEQTISLSQVIGRPDGTVPVIKIDGRWYLTEG
>NC_009523.1|WP_011957873.1|3990111_3992151_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MHSTHPYIYDVIVVGAGHAGCEAAHAAARMGCRTLLLTIDLDKLAHMSCNPSIGGPAKGHLVREIDALGGLMGRVTDRTFIQIRLLNESKGPAVQAPRAQADKRLYAKVMKETLETIPNLDLRQAMIERIILPRPINRNGSDTDDAEALCPGHYAVVTHTRRIYQCRALVLTTGTFLRGRAITGDAIWGAGRAGEAPATALGEDLAALGFPLVRLKTGTPPRIDARTIDFSLTSVQHGSATPLFFGFYYRALNEAPPEPAFGGPPASAYPEPLLDAWRPQLPCYLVHTTPEFHEIVRRNLDRAPLFSGIIEGVGPRYCPSIEDKIVRFADKERHGLFLEPEGWSTHEVYVQGCNTSLPEDVQWAMLRSIPALRRVELMRAGYAIEYDALATGEIAADMSSRRAPGLFFAGQINGTTGYEEAAAQGLMAGINAARFVQGKPSVLLRRDEAYIGVLIDDLVTKEIREPYRMFTSRAEHRLLLRADNADLRLTPLAGELGLVDRERVAVVERKREEVERLLAVLRGKRLYPSAAINARLSAAGIAPLTGEMSAEEVLRRPEVRYRQLQPALDLPACEADVAEQVDIEAKYSGYLLKQQREVERLRRMESRRIPPDFDFAALRGLRNEARQTLQRFRPATIGQAARLAGINPADIALLLVALERQTRQATPVETPHPSLPHTG
>NC_009523.1|WP_011957874.1|3992306_3993065_+|response-regulator-transcription-factor
MSVPISGPATAFVIEDDPFARWALGQYLESLRFTVLTAETYIDASALIAGHPPPRLAVVDLALRDNPAEPIPQSRSRGITLVHALKRRDPAVAVVIWSAYGGTIAPILPLLTSGYTGLAYVAKGSPQEALHDAITHALRQDVFFQPGIDHAATDSWEQMFLDALEPAVAATVVKLARCFDELTPQQRAVAERMACTTEAIAHQLGIRVTTVRKYIDAIYDRLELKDTETVAGYRREVLLALAHILRRLRTTA

Crispr_ID: NC_009523_75

• CRISPR_ID: NC_009523_75
• CRISPR_location: 4102869-4102957
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_75

Consensus_repeat	Method
ATCCTTGCCATACGCGAGAGGACTGGGG	CRISPRCasFinder

spacers of NC_009523_75

>75.1|4102897|33|NC_009523|CRISPRCasFinder
GAGGTTGGCGCAGCGCGTCAATCGCAGCCTGCG

CRISPR arrays and Neighbor proteins around NC_009523_75

CRISPR arrays

The CRISPR arrays of NC_009523_75

>merge|NC_009523|75|4102869-4102957|CRISPRCasFinder
ATCCTTGCCATACGCGAGAGGACTGGGGGAGGTTGGCGCAGCGCGTCAATCGCAGCCTGCGATCCTTGCCATACGCGAGAGGACTGGGG

>NC_009523|75|72|4102869-4102957|CRISPRCasFinder
ATCCTTGCCATACGCGAGAGGACTGGGG	GAGGTTGGCGCAGCGCGTCAATCGCAGCCTGCG
ATCCTTGCCATACGCGAGAGGACTGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957962.1|4108031_4109300_-|chlorophyllide-a-reductase-subunit-Y	unknown	unknown	gnl|CDD|238938
NC_009523.1|WP_011957961.1|4106544_4108026_-|chlorophyllide-a-reductase-subunit-Z	unknown	unknown	gnl|CDD|131069
NC_009523.1|WP_011957954.1|4094817_4095006_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957964.1|4110021_4110768_-|DUF169-domain-containing-protein	unknown	unknown	gnl|CDD|376845
NC_009523.1|WP_011957951.1|4091163_4093038_+|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|234715
NC_009523.1|WP_011957960.1|4105000_4105963_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_157041122.1|4097260_4097761_+|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl|CDD|319971
NC_009523.1|WP_011957956.1|4096459_4097194_-|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|143483
NC_009523.1|WP_011957950.1|4086587_4090907_-|CSLREA-domain-containing-protein	unknown	unknown	gnl|CDD|379079
NC_009523.1|WP_011957967.1|4113179_4113665_-|2-vinyl-bacteriochlorophyllide-hydratase	unknown	unknown	gnl|CDD|369300
NC_009523.1|WP_011957963.1|4109757_4109949_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957965.1|4110879_4112058_-|chlorophyllide-a-reductase-iron-protein-subunit-X	unknown	unknown	gnl|CDD|273929
NC_009523.1|WP_157041121.1|4081096_4086574_-|CSLREA-domain-containing-protein	unknown	unknown	gnl|CDD|275079
NC_009523.1|WP_011957952.1|4093657_4094134_+|CvpA-family-protein	unknown	unknown	gnl|CDD|367140
NC_009523.1|WP_157041352.1|4094488_4094803_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|376779
NC_009523.1|WP_011957948.1|4080665_4081100_-|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl|CDD|235443
NC_009523.1|WP_011957955.1|4095510_4096383_-|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|180194
NC_009523.1|WP_011957968.1|4113961_4114807_+|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NC_009523.1|WP_041333960.1|4112196_4113168_-|zinc-binding-dehydrogenase	unknown	unknown	gnl|CDD|130269
NC_009523.1|WP_011957959.1|4103394_4104768_-|caspase-family-protein	unknown	unknown	gnl|CDD|334197

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957962.1|4108031_4109300_-|chlorophyllide-a-reductase-subunit-Y	gnl|CDD|238938	cd01980, Chlide_reductase_Y, Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.	2.5772e-169
NC_009523.1|WP_011957961.1|4106544_4108026_-|chlorophyllide-a-reductase-subunit-Z	gnl|CDD|131069	TIGR02014, chlorin_reductase_subunit, chlorophyllide reductase subunit Z. This model represents the Z subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. [Energy metabolism, Photosynthesis].	0
NC_009523.1|WP_011957967.1|4113179_4113665_-|2-vinyl-bacteriochlorophyllide-hydratase	gnl|CDD|369300	pfam07284, BCHF, 2-vinyl bacteriochlorophyllide hydratase (BCHF). This family contains the bacterial enzyme 2-vinyl bacteriochlorophyllide hydratase (EC:4.2.1.-) (approximately 150 residues long). This is involved in the light-independent bacteriochlorophyll biosynthesis pathway by adding water across the 2-vinyl group.	5.1531e-72
NC_009523.1|WP_011957964.1|4110021_4110768_-|DUF169-domain-containing-protein	gnl|CDD|376845	pfam02596, DUF169, Uncharacterized ArCR, COG2043.	1.91317e-35
NC_009523.1|WP_011957951.1|4091163_4093038_+|molecular-chaperone-DnaK	gnl|CDD|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_009523.1|WP_011957960.1|4105000_4105963_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.22059e-21
NC_009523.1|WP_157041122.1|4097260_4097761_+|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl|CDD|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	2.33368e-62
NC_009523.1|WP_011957956.1|4096459_4097194_-|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	9.15804e-116
NC_009523.1|WP_011957950.1|4086587_4090907_-|CSLREA-domain-containing-protein	gnl|CDD|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	1.49886e-09
NC_009523.1|WP_011957965.1|4110879_4112058_-|chlorophyllide-a-reductase-iron-protein-subunit-X	gnl|CDD|273929	TIGR02016, Chlorophyllide_reductase_35.5_kDa_chain, chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein. [Energy metabolism, Photosynthesis].	4.46332e-127
NC_009523.1|WP_157041121.1|4081096_4086574_-|CSLREA-domain-containing-protein	gnl|CDD|275079	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD. Members of this family include NosD, a repetitive periplasmic protein required for the maturation of the copper-containing enzyme nitrous-oxide reductase. NosD appears to be part of a complex with NosF (an ABC transporter family ATP-binding protein) and NosY (a six-helix transmembrane protein in the ABC-2 permease family). However, NosDFY-like complexes appear to occur also in species whose copper requiring enzymes are something other than nitrous-oxide reductase.	1.00855e-08
NC_009523.1|WP_011957952.1|4093657_4094134_+|CvpA-family-protein	gnl|CDD|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	1.05804e-15
NC_009523.1|WP_157041352.1|4094488_4094803_+|ribosome-silencing-factor	gnl|CDD|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	7.94305e-41
NC_009523.1|WP_011957948.1|4080665_4081100_-|type-II-3-dehydroquinate-dehydratase	gnl|CDD|235443	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase.	1.59901e-88
NC_009523.1|WP_011957955.1|4095510_4096383_-|succinate--CoA-ligase-subunit-alpha	gnl|CDD|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	6.40788e-173
NC_009523.1|WP_011957968.1|4113961_4114807_+|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	1.36516e-21
NC_009523.1|WP_041333960.1|4112196_4113168_-|zinc-binding-dehydrogenase	gnl|CDD|130269	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	2.30143e-77
NC_009523.1|WP_011957959.1|4103394_4104768_-|caspase-family-protein	gnl|CDD|334197	pfam00656, Peptidase_C14, Caspase domain.	2.48876e-15

Protein sequences

>NC_009523.1|WP_157041122.1|4097260_4097761_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MSSANNRIIAVLFVCTGNICRSPMAEGIFRHYVEQAGLSGRIKTDSAGIGAWNIGDPPHPGVTALLAERGIRCNHRARMIQADDFARFDYIVAAERAHLDALRRMVGSSLVRLSLLLDYAPDLGLRDIPDPYYNGRFRDVHDMIDRACRGLLTHIITAERLEITRP
>NC_009523.1|WP_011957956.1|4096459_4097194_-|YggS-family-pyridoxal-phosphate-dependent-enzyme
METFIDRLRIVRERIAAAAQRAHRDPATIRLVGVTKAQPVEAIRTALDAGLCEIGENRVQEAEAKMTALEAERYRLTWHLIGHLQTNKAKKAATLFDMVHSVDSLRLAQAINRYAAEVRRDPGRRLPILLQVNVSGEATKSGFDLYGWETQPDVYERFCADVEQILALPHLDVRGLMTIAPWAPDPEAARPVFRATRRLRDALAQRFPIAPWRDLSMGMTDDFEVAIEEGATIVRIGRAIFGER
>NC_009523.1|WP_011957955.1|4095510_4096383_-|succinate--CoA-ligase-subunit-alpha
MSILVDKNTRLLVQGITGREGEFHTRQMIAYGTNVVAGVTPGRGGQTAIDGRVPVFNTVAEAVKQTGANVSVIYVPAAFAPDAMREAAAAGIPLIVCITEGIPANDMVATYAFIREHGARLIGPNCPGLLTPGQAKVGIIPGNIATPGPVGVVSKSGTLTYEAVDALTRIGLGQTTIVGIGGDPIIGTSFVDVLEMFQADPETAAIVLIGEIGGAAEIDAAKYIAAHVTKPVVSFIAGQTAPPGKRMGHAGAIITGGEGTAQEKIAALEAVGVRVARLPTDIAQLVREVL
>NC_009523.1|WP_011957954.1|4094817_4095006_+|hypothetical-protein
MNASKRTHYVIFGLGAAVGSAVGLVLGSILTYWLGEGTVRLVQRVFRRFTGGDQPNFEMLLQ
>NC_009523.1|WP_157041352.1|4094488_4094803_+|ribosome-silencing-factor
MTLAEDKQASNIVLLDLRRLNSVADYFVICTGGSERQLKAITEAIDEGLAREYDIQPRIEGTADTGWVLLDYGDVVVHIFSVELRDRYRLERLWSKATPVVVMQ
>NC_009523.1|WP_011957952.1|4093657_4094134_+|CvpA-family-protein
MNLLDILIGIILALAGIAGYYWGLVRQILALAGLAAGLAVAGRYGSDAADALMSFTASRAVAEVGGALTLLALVSGSASLLASLLQLYVGLIVFGNLDHGLGAALGIVHAALLITALGQVIRAYPLEPWTTMVRDSTLASLLMQTAGVVTGSLLRLAS
>NC_009523.1|WP_011957951.1|4091163_4093038_+|molecular-chaperone-DnaK
MPKIVGIDLGTTNSVVAVMEGGDPVVIPNAEGNRTTPSVVAFTKNGERLVGQTAKRQATINPDNTFYSIKRFIGRNFDETTVEREMVPFKVVKGPRNDVRVFSPVTGKEYAPQEISAMVLQKLKTDAEAYLGEPVTKAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKKDETILVFDLGGGTFDVSVLEVGDGVVEVKATNGDTHLGGDDYDQRIVNWLIDEFRKDQGIDLSKDRQALQRLKEAAEKAKIELSSMSETEINLPFITADASGPKHLQMRLSRAKFEQLTADLTERLKGPFFQALKDAGLKPGDLDEVVLVGGSTRMPVVIDLVRKLTGKEPNRSVNPDEVVAIGAAIQAGVLGGDVKDVVLLDVTPLSLGVETLGGVMTKLIERNTTIPTRKSEIFSTAADGQTAVDIHVLQGERELAADNMTLGRFRLEGIPPAPRGVPQIEVTFDIDANGILNVSARDKATGKEQRITITASTNLSKEEIERMIRDAELHAAEDKRRRELIELKNQSDSLAYQSEKSLNELGDKVDPALKSRVEGLIKDLREAISQENESRMRSISSELQQAMYQVSQSAYTSAGGDGAGAKKGKDEGVVEGEYTVE
>NC_009523.1|WP_011957950.1|4086587_4090907_-|CSLREA-domain-containing-protein
MSRFSSALTLLTLVIIVGALLPVGPAASTPVALASGVFVVTTAEDADGSTCPVSTSGDPANPSPTCSLRQAINAANAAGGGVIKFNIPPQVPAFETNGLYRAIRIRIRNDNEPLPALAGNITIDGKSQEINWPAQANLIGPEIIIDGSELINRSGIRLTGNNNVVREIAVVNFKSSSSTPSFGQGVGIDVVSGSNHRIEGNYVGIDPVSPTLTLSGNGFAGIWVEQSATDTVIGGLRTDLSKANFISGNDLDGIVVQGARTKIQGNFIGVGRLLSAETFALRNLGAGIIVRYADGTVIGATPDQPDPAYGNVIAGNNNFGIVINGGTNTQIAGNYIGLGSNAASQLIVSIPNAAGGIEVHSEEFPATNTQIGLPSPDLSTNRLRNFIAGNTGPGIVLRGHRTTNTTIVNNYIGLNDLGNPVSAPNNTGGGVVIERGARNVTVGGTTLNERNVISGNTGDGIIIRGLNPLRTTSNNTIIGNYIGTRVIGSLILPGYGNRSGIVIGDHVSDTVIGTPEAPNRIAFNFNYGVAITGTNVLTTTLSDNPIISNGYDGVYAASAVNLRVTGVNTATLIANNGWNGVRIDTGELVALENVVVSNNGDDGVRLTNVADVTLRSVTAQLNDDGLNVAGALSVLVENSQFNANRENGIRYAGGITTTLTNLTVQQNGQNGLWFTGVLTNTQIVATQAISNTLNGFLINGTTDVMTISGNEIVGNGASGMALTLTPGMAPVRDVIVSGNTLDRNAFSSPAFGVQISGGTEVVTVTGNIVDGTRNGGGFLLPGANRMTISGNLVRYNNGPGFQVSGGSDSVIIEGNEVISNTLGIEVRDAATIDVVVRGNSIYQSGATGWGGFGSGVGVAVNNAQRTRVEGNSITANLGAGVHVQGAATQTRVLGNFIVNNALGVLVGAPVGGPFTPPYPQQTQILNNSISGNGIPPDGPFPVDETLLGRGIVLNPETPTGGVAGNPNNDIDPPLQSSLRMNAAGVLTGQVDTTGAPGGCPSIGGVRCLIQIFRPDQTMLDGQGQEFAGETVVDATGAFTVTVGSIPRQLTLTATDPVSNTSRFAIFEPRPSLSISAPQAITADPGQVITYTHTVVNDGNIELSDVRIAVTTSRGWEGLSPPIAIQPPGSFSLAPGASRAITVSVRVPTGGGPQAAPGVDLMTVRVDGTTVSGDNTYTATASLVNTTTVNARIYLELTPALVEGRGNPGVAVPYVFQVRNTGNISATTSITATFDDLVFSVNWQRSLSTTSLTIPPGETRSFQLTVTVPPESANPVSGTYADVTVAITPTLPIDPSQARTAKARTIVGQVSRAQITPASDEKEGKPGETVVFLHEITNLGNGADTFQINGTPALGSVVRFTSLTSGVTINSEGRFTLAQGATAIIRVEVTVNPQLANGNVENVFIDLRDLNGNVIGGAFAQDRVRVVSSIRRVYLPLVIR
>NC_009523.1|WP_157041121.1|4081096_4086574_-|CSLREA-domain-containing-protein
MARAYRLLSVLALLAFFVVTPAPPVLAATFTVNSTGDDPDASPGNGVCQTAGGQCTLRAAIQEVNALTPGPHTIAFNIPTASSGYNSSGYWVIRLASALPAITVGNVTIDGRTQPVGNASWAHPRVVLDGSLITGGANGLTIISSGNTIRRLTIQNFVANPFDFSDTTGSGIFIRDSTNNRVHGCYLGTTPDGTSAARNHLAGVQIRNAGNNIIGNPTAGAGPDIDTAGDNAFGNLIAGNGRGTSGTSANVYLTASTYDNGRGNVIRGNLIGTNLAGTAKIAGDTGNQRYGVLLYQYLDDTIIDANVISGHDATSGSYGIYMYGLSVDGTDSPLDTVITGNVIGTTKGGISTTRVPNRVGIYIAGAHNTRIGGVTLAERNIISGNGTTPPGGHGIHLRGRSVLNTTIQGNHIGLNANGASFGRSGTDSLGNLGHGIFVENNARQTTIRNNVIANNWGNGILLASDGAVVVGNRIGINTATPPISDDAFANGQASIWISRGTTSSTSPGNRIGGTNPGDANIIAYGLGSTPVAVQIRSDGTPNTSNNEVIGNFIGVAATGQSLRASPSPSSIGVYIIGNSSSLRADNNRIIGNTIGGLGTGIQIESTFTTGNEISANTIGLASAGNQRGVWLFQTSGNTIGGAGGVGVNNTRNVLSYNTLHGILVGVNANGNTLLRNLAHNNGGTSGGHGVFVDSTVSQVRISGTETRDNSGKGINRAGSPPQPPTISGITGGSPPTLQVQVPSGANCGASGCRIEVFTSPTRDDAEGPRYLAFLDGASAGATVNVPVPDCDRFFSATVTDQGGNTSEFNLTMFEAPFSCQTDFTLAQTGRSPPGTGPVNPGTNVIYTYTVTNTGASPITVNISRNDTTGWASTPTPSTLNLNAGASETFTISFAVPANALAGNYTFSVTAQVGATQRTVNTTTSVAQVYGVAIAPTSQTATFARPQVITFTHMITNTGNGMDTITVTASVSPNDGATVSVVGGNCVNLAAFSSCTRQIQLNIPVGPGSSLYTVTVTARSSGNPDVQATATDTASAGAAPQITPASQLREALPGETVTFTHTVTNIGQSAGTFTPSLTLSQGSPWSGALTDPAPFNLNAGESRVVTMTVTVPNAPIPDAGTLVTATLTVLASGGASASAASVTRVGLVPGFTLSPATVPTLNLPPGATAVFTHTLTNTGNGSDTFVVTATLSSGLENLVVTPSAPFLLARNASQQVVVQARVRDGQAVGVQTIQVTGERVGGGVASQTQTDTVNVQAAPGVRLSPGQTQNVTPPGSVTFTHVLTNVGNVAGGFSVSAGGLPGGWSIAGPTNLVPANCLTGLAPGATCQFDLVVTTPSQLPQVPTGLYPFQVQASTTGTSDAVTDVANVTAVPQFLFTANESGSGAPDTVIGFTHRVTNTGNVTDTYTFSVQVSGGGFSASPPGTVATVPPGSTRLVTLEVRIPPAAPAGTTGVVTLTATSAQGAPPQSVVDTVTVNEADNARIDVVGLAQQTVFTSGAPATAIYTLNLFNTGNTTISYTLRLNPASLTGGWTASVTPTLTAILTPDATTPTPLTVQVSVPADVVGTQSVTVEALRGDGAGPVLASATLTTTAQLIAIGDLLTPVEQWGFGLPGATVVYTHTLRNVRPVADTFVFSALAPLGYEVSLPPATFLQPGEEREVSVSIRIPTGVLSNTIDAMRLSVQSVSDPNIAASAREYTTIRQVVNAVISPAYTRVVQAGDQVRLTHQLLNTGNATDTFVLTYTQTLNWNIVLQPTQRTLGPNQQAPFITLDVNVPTNAPPGSVNRIRVRAQSQSDPTKVFEVENLFVIPAALPQATYDVYLPLVQR
>NC_009523.1|WP_011957948.1|4080665_4081100_-|type-II-3-dehydroquinate-dehydratase
MKILVIHGPNLNMLGRREPEVYGSVTLDEIDAALRERATAAGATLLTIQSNHEGALIDFLQAEGWDADGIIINPGALTHYGLALRDALAMLKAPIIEVHLSNVYRREPFRHTSVVAPVATGQIAGLGWRGYLLALEWLLEEKRA
>NC_009523.1|WP_011957959.1|4103394_4104768_-|caspase-family-protein
MAFTRGYALIIGVGSYRFAPHLNVPITAADAEAVATALRDPRLCGYPDANVTLLANEGATRDGVLAALRTLAQRTTPADTILLFYSGHGEYSADGVYALTTHDTRFDTGGKVVTGAAVSQTDLITALRAIPAQRVLVLINACHAGELSPTLGAGQPAVVGQPFPQQTTDALLATGSGRIIITACREQQVAYIGPGPLTIFAQALTDGLRGQGVSGRAGFISAFDLYTHLYFAVREAVEQRVPPALRQQHGPQEPELTVLKGVGPFAVALFRGATQPGDFPTDHAPPPETAMRTVEPSRSRWAFQQITGERAVNVAGSVSNSTIITGDGNTVAQGDIIRTGDISGSGIAIGRGAQAHVQGAPPAARSVAALFAPVEAAIRQRPDDPIVTKDELLATVRWIADEVAQGAQANEQRLIRLLRALATTAPDIFAPVVTILQTQSICAAAVRAALQVQRDGN
>NC_009523.1|WP_011957960.1|4105000_4105963_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQLIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITALNLLLRLPELGTIKRTEAAAVVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFYQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957961.1|4106544_4108026_-|chlorophyllide-a-reductase-subunit-Z
MPPSLIRDLSDTSGYWAAVWTMCTMPDVHVIADAPVGCFNLVATAVPDYTDAVPHIENMTPATITEQEVGGKGTSDKVRWTYENLRASGALDGKQLIVISTAESEMIGADLSSVVTTLGEGTRFYWSNSLSEDEWSGRDRVLRWLWEQFGAPHAANVQPAPGTVNIIGPTYGCFNSPSDLEEVKRLITGAGGRINLVYPMEATLADTPRLAAAQVNVVMYREFGAGLAGMLGQPTLYAPFGLRETTGFVRELGRLLGTTDQAEAFIAAEKRTTLRAVWDLWRGPQGDWFGTTDVGIVAGRSYAEGLARYLGDELGMKIAFVSARPRRPDDPDNDQIRQMLHRRAPAFVFGSINEKIYLSEAGAKFARFFMASFPGPTVRRAVGTPFMGYRGAVYVVQEIVNGLYDTLFNFLPVDQAYSMMRGGPPKIESAPGNLPWSLEAKAVLDEALEKLPYIPRISASRQMQMQVETLARERALKEITPDLVREALANAGM
>NC_009523.1|WP_011957962.1|4108031_4109300_-|chlorophyllide-a-reductase-subunit-Y
MEPIALSAEQPQGHTCKLHPQSMCPAFGSLRILSRIEGSHPVMATDTGCLYGLTFVTHFYGARKSILAPTLGSAELYSGEIVEGTRAAIEAAAREPGCRLVPVVSLCVAETAGMPEELLPRRVGEADVVLVRVPAYAIHSHPEAKDVALEALLRRLGDREGPREDRTVVVVGEVFPADQLAIDAILRRMGVETTVALPGRSIDDLRRAGRAAALAPLHPFYKGVTRLYREWGASVAGGAPVGISGTYAWIKSIGALLDLDPTLVDQVAQEERAKAEAVLAAKSLKGARVLVTGYEGTELAYARLLVEAGAEVPYVSTSIGADPLALPDELWLKARGTQEVVYRKALEEDMAALDRYAPDFVLGTTPFAAAAKERGIPAMYFTNQLASRPFFLSGGMAATIGFVAETLERSSRYREMLAFFAE
>NC_009523.1|WP_011957963.1|4109757_4109949_-|hypothetical-protein
MDFLILLQAAPSPWPEWTGYLICFGPLAAVILGFIIAARFTDKQATSAYLRLDPAKANEPEQQ
>NC_009523.1|WP_011957964.1|4110021_4110768_-|DUF169-domain-containing-protein
MLAEQTAVDLKYLHTLLVERMKVKRRPVAVTYCEDRPPPGYEPANVVACAIIREAEAGRRVYVDAHHHDCWVGQYHLGWLPDAGRLITEGQYLTMAQGFFTEEGARRNKAQSSVLPTGSIAALAAAPLDDVPDGVPVDLLVCITDPMHAMQIAGAASVREGTFPIGELGPSACASIFATPRLKRNSVFATGDGGGRMHNRVAPGEMFIAVPREHFRYIVELIENFRIDPEEMRRLIMPSHARKGNDGS
>NC_009523.1|WP_011957965.1|4110879_4112058_-|chlorophyllide-a-reductase-iron-protein-subunit-X
MAPRMIAIYGKGGMGKSFFTSNLTARLAFDGYRVLQLGCDPKHDSCNTIFGGHSLPTLGDQWRLFKEAGKEDQLSIGDVIFRNELRPGVVIFGCELGGPEVGRGCGGQGISTGFKVLEHLGMSRWNLDFIVMDFLGDVVCGGFATPLARSLAEQVIILVGHDRQSLYAANNIARAAQYFRSMGGTTQILGLVVNRDDGSDTADQYARAVGLPILTRVPLSRKVRELADACRLALEDAQFNEIFGDLAGRIARQELQPVENYTPLGYEEFLRVFGAEEPPGRPAAAREQDLFGDKAPTFTVPILSLKPVIPQVQATDPVQRKVQQMIEAIGMYVTDMVRSDRDGITVTSGSIEIRLGEPNDLEHKVAFLSALRRSGQAFSFVDLRYADAPTYR
>NC_009523.1|WP_041333960.1|4112196_4113168_-|zinc-binding-dehydrogenase
MSTTRAIVISEPHRLELRDVALTDAGPDDVVVRTAFTSISAGTERMLLAGRMPHPMLQFPVVPGYETVGRIVARGTAVPAEYDGRWVYVGGARCFRDVNPAWGGQAATLLVDYRRIVPLDGMQPEHGVLLALAATALHGVDLIAGTGQNLTGRRVLVLGQGPVGQFAARIARAQGAWVAVSDRVASRLERSVADLRVDVTTDSLVAAVQQPVDTIIEATGSMAALSDALPLLANDGTIILLGYYDELRLPYMPLFLKQARLLTAKEWVTGDLQRSRDLLASGMLDAAALITHRAPVARFEEAYATALNDPECLKLVIEWDVGG
>NC_009523.1|WP_011957967.1|4113179_4113665_-|2-vinyl-bacteriochlorophyllide-hydratase
MSMYTPEQLARRDASVWTKVQAVLAPIQFLAFLISFGLVIRYLVTGEGYMIATVSVWIKIALLWAITITGMIWEKEIFGRWFMAPEFFWEDAGNALAMVMHNLYFLAVWLHWSPDAIMTLMLVAYCTYLINCAQFVYRGIQAGRQRRMMRSGSGQTGVVAH
>NC_009523.1|WP_011957968.1|4113961_4114807_+|universal-stress-protein
MRINNVPLVFTTTAIDRSFALLPNVAAFASAIGRPLRIVHVLGQRYRSYAERQMAAAIEALPSGNGLVFELLKIESKQRRAFLDEIASTTGGILAMLPTRHNFINRLLAMMSDYEKFMIEGPLPILALPRNGALPTSIERILFPLDLSPRSDDPLDQAADFAKSVGAELHLIYAFGDDRLLPSEMDMAARLAARSPRELYQIDKDRINALAERARSHGVPVVVSTTEGRAHTAILNYCNAEKIDLAIMATHGPRSSEDIWHGTTTARVIKHASIPVIAMRC

Crispr_ID: NC_009523_76

• CRISPR_ID: NC_009523_76
• CRISPR_location: 4112079-4112187
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009523_76

Consensus_repeat	Method
AACGCCCAACCTTCAACCTTCAAC	CRISPRCasFinder

spacers of NC_009523_76

>76.1|4112103|18|NC_009523|CRISPRCasFinder
GTTGAACGTATAACGCCC
>76.2|4112145|19|NC_009523|CRISPRCasFinder
CTTCAACCTTCCAACCTTC

CRISPR arrays and Neighbor proteins around NC_009523_76

CRISPR arrays

The CRISPR arrays of NC_009523_76

>merge|NC_009523|76|4112079-4112187|CRISPRCasFinder
TACGCCCAACGTTGAACGTTCAACGTTGAACGTATAACGCCCAACCTTCAACCTTCAACGCCCAACCTTCAACCTTCCAACCTTCAACGCCCAACCTTCAACCTTCAAC

>NC_009523|76|73|4112079-4112187|CRISPRCasFinder
TACGCCCAACGTTGAACGTTCAAC	GTTGAACGTATAACGCCC
AACCTTCAACCTTCAACGCCCAAC	CTTCAACCTTCCAACCTTC
AACGCCCAACCTTCAACCTTCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011957962.1|4108031_4109300_-|chlorophyllide-a-reductase-subunit-Y	unknown	unknown	gnl|CDD|238938
NC_009523.1|WP_011957973.1|4119126_4121058_-|photosynthetic-reaction-center-subunit-M	unknown	unknown	gnl|CDD|172976
NC_009523.1|WP_011957961.1|4106544_4108026_-|chlorophyllide-a-reductase-subunit-Z	unknown	unknown	gnl|CDD|131069
NC_009523.1|WP_011957967.1|4113179_4113665_-|2-vinyl-bacteriochlorophyllide-hydratase	unknown	unknown	gnl|CDD|369300
NC_009523.1|WP_011957964.1|4110021_4110768_-|DUF169-domain-containing-protein	unknown	unknown	gnl|CDD|376845
NC_009523.1|WP_011957972.1|4118065_4119028_-|photosynthetic-reaction-center-cytochrome-c-subunit	unknown	unknown	gnl|CDD|198423
NC_009523.1|WP_011957974.1|4121237_4121360_-|light-harvesting-protein	unknown	unknown	unknown
NC_009523.1|WP_011957975.1|4121381_4121552_-|light-harvesting-protein	unknown	unknown	unknown
NC_009523.1|WP_011957960.1|4105000_4105963_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_157041122.1|4097260_4097761_+|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl|CDD|319971
NC_009523.1|WP_011957956.1|4096459_4097194_-|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|143483
NC_009523.1|WP_011957965.1|4110879_4112058_-|chlorophyllide-a-reductase-iron-protein-subunit-X	unknown	unknown	gnl|CDD|273929
NC_009523.1|WP_011957971.1|4117013_4117928_-|chlorophyll-synthase-ChlG	unknown	unknown	gnl|CDD|236052
NC_009523.1|WP_011957963.1|4109757_4109949_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011957959.1|4103394_4104768_-|caspase-family-protein	unknown	unknown	gnl|CDD|334197
NC_009523.1|WP_157041123.1|4114859_4115621_-|DUF3623-family-protein	unknown	unknown	gnl|CDD|372016
NC_009523.1|WP_011957970.1|4115656_4116877_-|geranylgeranyl-diphosphate-reductase	unknown	unknown	gnl|CDD|273932
NC_009523.1|WP_011957955.1|4095510_4096383_-|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|180194
NC_009523.1|WP_011957968.1|4113961_4114807_+|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NC_009523.1|WP_041333960.1|4112196_4113168_-|zinc-binding-dehydrogenase	unknown	unknown	gnl|CDD|130269

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011957962.1|4108031_4109300_-|chlorophyllide-a-reductase-subunit-Y	gnl|CDD|238938	cd01980, Chlide_reductase_Y, Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.	2.5772e-169
NC_009523.1|WP_011957973.1|4119126_4121058_-|photosynthetic-reaction-center-subunit-M	gnl|CDD|172976	PRK14505, PRK14505, bifunctional photosynthetic reaction center subunit L/M; Provisional.	0
NC_009523.1|WP_011957961.1|4106544_4108026_-|chlorophyllide-a-reductase-subunit-Z	gnl|CDD|131069	TIGR02014, chlorin_reductase_subunit, chlorophyllide reductase subunit Z. This model represents the Z subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. [Energy metabolism, Photosynthesis].	0
NC_009523.1|WP_011957960.1|4105000_4105963_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	1.22059e-21
NC_009523.1|WP_011957964.1|4110021_4110768_-|DUF169-domain-containing-protein	gnl|CDD|376845	pfam02596, DUF169, Uncharacterized ArCR, COG2043.	1.91317e-35
NC_009523.1|WP_011957967.1|4113179_4113665_-|2-vinyl-bacteriochlorophyllide-hydratase	gnl|CDD|369300	pfam07284, BCHF, 2-vinyl bacteriochlorophyllide hydratase (BCHF). This family contains the bacterial enzyme 2-vinyl bacteriochlorophyllide hydratase (EC:4.2.1.-) (approximately 150 residues long). This is involved in the light-independent bacteriochlorophyll biosynthesis pathway by adding water across the 2-vinyl group.	5.1531e-72
NC_009523.1|WP_157041122.1|4097260_4097761_+|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl|CDD|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	2.33368e-62
NC_009523.1|WP_011957956.1|4096459_4097194_-|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	9.15804e-116
NC_009523.1|WP_011957965.1|4110879_4112058_-|chlorophyllide-a-reductase-iron-protein-subunit-X	gnl|CDD|273929	TIGR02016, Chlorophyllide_reductase_35.5_kDa_chain, chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein. [Energy metabolism, Photosynthesis].	4.46332e-127
NC_009523.1|WP_011957971.1|4117013_4117928_-|chlorophyll-synthase-ChlG	gnl|CDD|236052	PRK07566, PRK07566, chlorophyll synthase ChlG.	3.27365e-143
NC_009523.1|WP_011957972.1|4118065_4119028_-|photosynthetic-reaction-center-cytochrome-c-subunit	gnl|CDD|198423	cd09224, CytoC_RC, Cytochrome C subunit of the bacterial photosynthetic reaction center. Photosynthesis in purple bacteria is dependent on light-induced electron transfer in the reaction center (RC), coupled to the uptake of protons from the cytoplasm. The RC contains a cytochrome molecule which re-reduces the oxidized electron donor. The electron transfer reactions of photosynthesis are performed by the following three components: the photosynthetic reaction center (RC), the cytochrome, and the soluble electron carrier protein. Firstly, the RC promotes the light-induced charge separation across the plasma membrane, which results in the oxidation of a pair of light-harvesting complexes, LH1 and LH2, and the reduction of quinone to quinol. The quinol then leaves the RC and moves to the cytochrome complex through the quinone pool of the plasma membrane. Secondly, the cytochrome complex reoxidizes the quinol to quinone, and the released electrons are transferred to soluble electron carriers. Third, the soluble electron carriers transport the electrons to the RC through the periplasmic space. Finally, the photo-oxidized light-harvesting complex is reduced by the soluble electron carriers, and the RC comes back to the initial state. In the course of the oxidation and reduction of the quinones, a transmembrane electrochemical gradient of protons is formed, and its energy is used to produce ATP by the ATP synthase complex.	1.55772e-89
NC_009523.1|WP_011957959.1|4103394_4104768_-|caspase-family-protein	gnl|CDD|334197	pfam00656, Peptidase_C14, Caspase domain.	2.48876e-15
NC_009523.1|WP_157041123.1|4114859_4115621_-|DUF3623-family-protein	gnl|CDD|372016	pfam12291, DUF3623, Protein of unknown function (DUF3623). This family of proteins is found in bacteria. Proteins in this family are typically between 261 and 345 amino acids in length.	4.67919e-62
NC_009523.1|WP_011957970.1|4115656_4116877_-|geranylgeranyl-diphosphate-reductase	gnl|CDD|273932	TIGR02023, geranylgeranyl_bacteriochlorophyll_reductase, geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	7.13885e-168
NC_009523.1|WP_011957955.1|4095510_4096383_-|succinate--CoA-ligase-subunit-alpha	gnl|CDD|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	6.40788e-173
NC_009523.1|WP_011957968.1|4113961_4114807_+|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	1.36516e-21
NC_009523.1|WP_041333960.1|4112196_4113168_-|zinc-binding-dehydrogenase	gnl|CDD|130269	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	2.30143e-77

Protein sequences

>NC_009523.1|WP_011957965.1|4110879_4112058_-|chlorophyllide-a-reductase-iron-protein-subunit-X
MAPRMIAIYGKGGMGKSFFTSNLTARLAFDGYRVLQLGCDPKHDSCNTIFGGHSLPTLGDQWRLFKEAGKEDQLSIGDVIFRNELRPGVVIFGCELGGPEVGRGCGGQGISTGFKVLEHLGMSRWNLDFIVMDFLGDVVCGGFATPLARSLAEQVIILVGHDRQSLYAANNIARAAQYFRSMGGTTQILGLVVNRDDGSDTADQYARAVGLPILTRVPLSRKVRELADACRLALEDAQFNEIFGDLAGRIARQELQPVENYTPLGYEEFLRVFGAEEPPGRPAAAREQDLFGDKAPTFTVPILSLKPVIPQVQATDPVQRKVQQMIEAIGMYVTDMVRSDRDGITVTSGSIEIRLGEPNDLEHKVAFLSALRRSGQAFSFVDLRYADAPTYR
>NC_009523.1|WP_011957964.1|4110021_4110768_-|DUF169-domain-containing-protein
MLAEQTAVDLKYLHTLLVERMKVKRRPVAVTYCEDRPPPGYEPANVVACAIIREAEAGRRVYVDAHHHDCWVGQYHLGWLPDAGRLITEGQYLTMAQGFFTEEGARRNKAQSSVLPTGSIAALAAAPLDDVPDGVPVDLLVCITDPMHAMQIAGAASVREGTFPIGELGPSACASIFATPRLKRNSVFATGDGGGRMHNRVAPGEMFIAVPREHFRYIVELIENFRIDPEEMRRLIMPSHARKGNDGS
>NC_009523.1|WP_011957963.1|4109757_4109949_-|hypothetical-protein
MDFLILLQAAPSPWPEWTGYLICFGPLAAVILGFIIAARFTDKQATSAYLRLDPAKANEPEQQ
>NC_009523.1|WP_011957962.1|4108031_4109300_-|chlorophyllide-a-reductase-subunit-Y
MEPIALSAEQPQGHTCKLHPQSMCPAFGSLRILSRIEGSHPVMATDTGCLYGLTFVTHFYGARKSILAPTLGSAELYSGEIVEGTRAAIEAAAREPGCRLVPVVSLCVAETAGMPEELLPRRVGEADVVLVRVPAYAIHSHPEAKDVALEALLRRLGDREGPREDRTVVVVGEVFPADQLAIDAILRRMGVETTVALPGRSIDDLRRAGRAAALAPLHPFYKGVTRLYREWGASVAGGAPVGISGTYAWIKSIGALLDLDPTLVDQVAQEERAKAEAVLAAKSLKGARVLVTGYEGTELAYARLLVEAGAEVPYVSTSIGADPLALPDELWLKARGTQEVVYRKALEEDMAALDRYAPDFVLGTTPFAAAAKERGIPAMYFTNQLASRPFFLSGGMAATIGFVAETLERSSRYREMLAFFAE
>NC_009523.1|WP_011957961.1|4106544_4108026_-|chlorophyllide-a-reductase-subunit-Z
MPPSLIRDLSDTSGYWAAVWTMCTMPDVHVIADAPVGCFNLVATAVPDYTDAVPHIENMTPATITEQEVGGKGTSDKVRWTYENLRASGALDGKQLIVISTAESEMIGADLSSVVTTLGEGTRFYWSNSLSEDEWSGRDRVLRWLWEQFGAPHAANVQPAPGTVNIIGPTYGCFNSPSDLEEVKRLITGAGGRINLVYPMEATLADTPRLAAAQVNVVMYREFGAGLAGMLGQPTLYAPFGLRETTGFVRELGRLLGTTDQAEAFIAAEKRTTLRAVWDLWRGPQGDWFGTTDVGIVAGRSYAEGLARYLGDELGMKIAFVSARPRRPDDPDNDQIRQMLHRRAPAFVFGSINEKIYLSEAGAKFARFFMASFPGPTVRRAVGTPFMGYRGAVYVVQEIVNGLYDTLFNFLPVDQAYSMMRGGPPKIESAPGNLPWSLEAKAVLDEALEKLPYIPRISASRQMQMQVETLARERALKEITPDLVREALANAGM
>NC_009523.1|WP_011957960.1|4105000_4105963_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQLIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITALNLLLRLPELGTIKRTEAAAVVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFYQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011957959.1|4103394_4104768_-|caspase-family-protein
MAFTRGYALIIGVGSYRFAPHLNVPITAADAEAVATALRDPRLCGYPDANVTLLANEGATRDGVLAALRTLAQRTTPADTILLFYSGHGEYSADGVYALTTHDTRFDTGGKVVTGAAVSQTDLITALRAIPAQRVLVLINACHAGELSPTLGAGQPAVVGQPFPQQTTDALLATGSGRIIITACREQQVAYIGPGPLTIFAQALTDGLRGQGVSGRAGFISAFDLYTHLYFAVREAVEQRVPPALRQQHGPQEPELTVLKGVGPFAVALFRGATQPGDFPTDHAPPPETAMRTVEPSRSRWAFQQITGERAVNVAGSVSNSTIITGDGNTVAQGDIIRTGDISGSGIAIGRGAQAHVQGAPPAARSVAALFAPVEAAIRQRPDDPIVTKDELLATVRWIADEVAQGAQANEQRLIRLLRALATTAPDIFAPVVTILQTQSICAAAVRAALQVQRDGN
>NC_009523.1|WP_157041122.1|4097260_4097761_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MSSANNRIIAVLFVCTGNICRSPMAEGIFRHYVEQAGLSGRIKTDSAGIGAWNIGDPPHPGVTALLAERGIRCNHRARMIQADDFARFDYIVAAERAHLDALRRMVGSSLVRLSLLLDYAPDLGLRDIPDPYYNGRFRDVHDMIDRACRGLLTHIITAERLEITRP
>NC_009523.1|WP_011957956.1|4096459_4097194_-|YggS-family-pyridoxal-phosphate-dependent-enzyme
METFIDRLRIVRERIAAAAQRAHRDPATIRLVGVTKAQPVEAIRTALDAGLCEIGENRVQEAEAKMTALEAERYRLTWHLIGHLQTNKAKKAATLFDMVHSVDSLRLAQAINRYAAEVRRDPGRRLPILLQVNVSGEATKSGFDLYGWETQPDVYERFCADVEQILALPHLDVRGLMTIAPWAPDPEAARPVFRATRRLRDALAQRFPIAPWRDLSMGMTDDFEVAIEEGATIVRIGRAIFGER
>NC_009523.1|WP_011957955.1|4095510_4096383_-|succinate--CoA-ligase-subunit-alpha
MSILVDKNTRLLVQGITGREGEFHTRQMIAYGTNVVAGVTPGRGGQTAIDGRVPVFNTVAEAVKQTGANVSVIYVPAAFAPDAMREAAAAGIPLIVCITEGIPANDMVATYAFIREHGARLIGPNCPGLLTPGQAKVGIIPGNIATPGPVGVVSKSGTLTYEAVDALTRIGLGQTTIVGIGGDPIIGTSFVDVLEMFQADPETAAIVLIGEIGGAAEIDAAKYIAAHVTKPVVSFIAGQTAPPGKRMGHAGAIITGGEGTAQEKIAALEAVGVRVARLPTDIAQLVREVL
>NC_009523.1|WP_041333960.1|4112196_4113168_-|zinc-binding-dehydrogenase
MSTTRAIVISEPHRLELRDVALTDAGPDDVVVRTAFTSISAGTERMLLAGRMPHPMLQFPVVPGYETVGRIVARGTAVPAEYDGRWVYVGGARCFRDVNPAWGGQAATLLVDYRRIVPLDGMQPEHGVLLALAATALHGVDLIAGTGQNLTGRRVLVLGQGPVGQFAARIARAQGAWVAVSDRVASRLERSVADLRVDVTTDSLVAAVQQPVDTIIEATGSMAALSDALPLLANDGTIILLGYYDELRLPYMPLFLKQARLLTAKEWVTGDLQRSRDLLASGMLDAAALITHRAPVARFEEAYATALNDPECLKLVIEWDVGG
>NC_009523.1|WP_011957967.1|4113179_4113665_-|2-vinyl-bacteriochlorophyllide-hydratase
MSMYTPEQLARRDASVWTKVQAVLAPIQFLAFLISFGLVIRYLVTGEGYMIATVSVWIKIALLWAITITGMIWEKEIFGRWFMAPEFFWEDAGNALAMVMHNLYFLAVWLHWSPDAIMTLMLVAYCTYLINCAQFVYRGIQAGRQRRMMRSGSGQTGVVAH
>NC_009523.1|WP_011957968.1|4113961_4114807_+|universal-stress-protein
MRINNVPLVFTTTAIDRSFALLPNVAAFASAIGRPLRIVHVLGQRYRSYAERQMAAAIEALPSGNGLVFELLKIESKQRRAFLDEIASTTGGILAMLPTRHNFINRLLAMMSDYEKFMIEGPLPILALPRNGALPTSIERILFPLDLSPRSDDPLDQAADFAKSVGAELHLIYAFGDDRLLPSEMDMAARLAARSPRELYQIDKDRINALAERARSHGVPVVVSTTEGRAHTAILNYCNAEKIDLAIMATHGPRSSEDIWHGTTTARVIKHASIPVIAMRC
>NC_009523.1|WP_157041123.1|4114859_4115621_-|DUF3623-family-protein
MLLSLAPLLYAVLVLSAAIVLPAIADRLSSEAFSWLYGLATVAVVGALVVLALIYNDRSLRGVYVAHLCAIIVWVWQEIGCRMYAGPGMRRLGFARRSALWQEIMWVFPAAGIVALTWNGANQWGVWAFFLAWWGHLSMRLTAYAAAHARDGGPLLWPPWFAVGLPPAQVLSAIFPLSVTALTAACVWFATDALAYGLDTSAGVGATLLAAQSAVACVALWLDVLPVNVWVWRLAQRWRGASISPIPQPVHDV
>NC_009523.1|WP_011957970.1|4115656_4116877_-|geranylgeranyl-diphosphate-reductase
MDPVLVVGASVGGSTAADTLARAGVPVVMLERDTSYVKPCGGAVPPVAFTEFDLPETLISRKVHHALVHSPSERVVEIEVAGVNHSDQDYIAMCCREEFDRYIRQRAVQRGAMLIEGQLVDLAFDKEGVTATYRERFGGARQQLRVTAVIGADGAYSTTAKLLGLPNLPRCIAIQQRIRLPAGKMARWEDTADLYLGPEVSPDLYAWAFPKSDHVAVGIGTGPAHSKRARELLANLKHRIRRDLEGGEIILEEAHALPMEPREHMAFERAMLIGDAAGLVVHTSGEGIYWAMKSGKMAAETLIESLPDASLTALRRYERRWWKTYGTMYRFLVFLQKWGYGSARQMEVFTDMCRNLDVQRLTFESYMHKTMAPVPWLAQLRMTADIIAAQVRHYLPRRRTDQPAVA
>NC_009523.1|WP_011957971.1|4117013_4117928_-|chlorophyll-synthase-ChlG
MPESTASTASSRASPSPMLILRRSVELMKPVTWFAPSWAFLCGSIASGASQWTVTDVGRIALGTLLAGPILCGMAQVVNDYCDRDVDAINEPQRLIPSGLVSTRQVFITVGVLVVLGLGIALFLGQYVALMTAIGMVLAVIYSAGPIRAKRNGWIGNTIVAVSYEGLPWIAGHLAFAPLTFGSVLMAALFSLGAHGIMTINDFKSIEGDRISGIRSIPVLYGEIAAAWTAFVTINVAQILVVMYFLHTRNWIIASIIGALVLMQIPTQWKFFTIADPRKRAIFYNASGIAMFVWGMMAAAIGLR
>NC_009523.1|WP_011957972.1|4118065_4119028_-|photosynthetic-reaction-center-cytochrome-c-subunit
MIQQPPTLFPEITNTVRGRFYIVAGLISAVMAVASIVIFWWIFYTVIPAPPPPLQNPIYVNYTQEPTNYISAESLAAMNAYIQANPQPQAVQVLKGMTTAQISAYMVAHVSGGLKVDCSYCHNIANFAQTDGYPNAAKKVTARKMMLMSADLNQNYTAKLPASVGGYQITCATCHNGKAAGLEPYPIEIMNTLPNDWRLPLDLDYPGGLVVTGRKDVSNAEVEQNQFAMYHMNVSMGQGCTFCHNSRYFPSYEVEQKNHSIIMLQMSKHIQETYVAPGGRIADGIMAGKSPSCWLCHQGARIPPGAAKPGQVPAVLSSTP
>NC_009523.1|WP_011957973.1|4119126_4121058_-|photosynthetic-reaction-center-subunit-M
MSAVPRALPLPSGETLPAEAISSTGSQAASAEVIPFSIIEEFYKRPGKTLAARFFGVDPFDFWIGRFYVGLFGAISIVGIVLGVAFYLYEGVVNEGTFNILAMRIEPPPVSEGFNISPGKPGFFWFLTMVSATIAFIGWLLRQIDISLKLDMGMEVPIAFGAVVSSWITLQWLRPIAMGGWGHGFPLGITHHLDWVSNIGYQYYNFFYNPFHAIGITLLFASTLFLHMHGSAVLSEARRNISDQNIHVFWRNILGYSIGEIGIHRVAFWTGAASVLFSNLCIFLSGTFVKDWNAFWGFWDRMPIWNGIGQGALAAGLALMGVGLVLGRARETPEPVDLRDEEYRDGLEGTIAKPPGHVGWMQRLLGEGQVGPIYVGLWGVISFITFFASAFIILVDYGRQVEWNAVIYLREFWNLAVYPPPTEYGLSWNVPWDKGGAWLAATFFLHLSVLTWWARLYTRAKATRIGTHLAWGFASALSLYFVIYLFHPLALGNWSAAPGHGFRAILDWTNYVSIHWGNFYYNPFHMLSIFFLLGSTLLLAMHGATIVATSKWKSEMEFTEMMAEGPGTQRAQLFWRWVMGWNANSYNIHIWAWWFAALTAITGAIGLFLSGTVIPDWYTWGESIKIVAPMPPLEYWWQQFIFR
>NC_009523.1|WP_011957974.1|4121237_4121360_-|light-harvesting-protein
MKDRPFEFRTVVVVSTLIGLVMALLIHFVVLSSPIIPWLK
>NC_009523.1|WP_011957975.1|4121381_4121552_-|light-harvesting-protein
MSDKPQNDLVPDQWKPLFNNAEWLVHDIVVKTIYGGLVIAVIAHILCWAWTPWLRF

Crispr_ID: NC_009523_77

• CRISPR_ID: NC_009523_77
• CRISPR_location: 4182383-4182474
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_77

Consensus_repeat	Method
ATAGCCCGCACAGGCGGGCTTTGC	CRISPRCasFinder

spacers of NC_009523_77

>77.1|4182407|44|NC_009523|CRISPRCasFinder
ATTCCATAGCCGAGGGCTTATGGACTTTGAAGAAATAATCCGGT

CRISPR arrays and Neighbor proteins around NC_009523_77

CRISPR arrays

The CRISPR arrays of NC_009523_77

>merge|NC_009523|77|4182383-4182474|CRISPRCasFinder
ATAGCCCGCACAGGCGGGCTTTGCATTCCATAGCCGAGGGCTTATGGACTTTGAAGAAATAATCCGGTATAGCCCGCGCAGGCGGGCTTTGC

>NC_009523|77|74|4182383-4182474|CRISPRCasFinder
ATAGCCCGCACAGGCGGGCTTTGC	ATTCCATAGCCGAGGGCTTATGGACTTTGAAGAAATAATCCGGT
ATAGCCCGCGCAGGCGGGCTTTGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958032.1|4176954_4177515_+|50S-ribosomal-protein-L10	unknown	unknown	gnl|CDD|234632
NC_009523.1|WP_011958037.1|4180854_4182075_+|MFS-transporter	unknown	unknown	gnl|CDD|340883
NC_009523.1|WP_011958040.1|4184641_4186378_-|bifunctional-sulfate-adenylyltransferase/adenylylsulfate-kinase	unknown	unknown	gnl|CDD|180124
NC_009523.1|WP_041335647.1|4194221_4194992_+|NAD-dependent-protein-deacylase	unknown	unknown	gnl|CDD|234777
NC_009523.1|WP_011958031.1|4176000_4176723_+|50S-ribosomal-protein-L1	unknown	unknown	gnl|CDD|180071
NC_009523.1|WP_011958039.1|4183640_4184543_-|phosphotransferase	unknown	unknown	gnl|CDD|213993
NC_009523.1|WP_011958033.1|4177597_4178020_+|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl|CDD|234671
NC_009523.1|WP_011958028.1|4174633_4174888_+|preprotein-translocase-subunit-SecE	unknown	unknown	gnl|CDD|376355
NC_009523.1|WP_011958029.1|4174911_4175496_+|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl|CDD|180161
NC_009523.1|WP_011958038.1|4182654_4183572_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl|CDD|234626
NC_009523.1|WP_011958036.1|4179730_4180843_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340838
NC_009523.1|WP_011958047.1|4193278_4194004_-|protein-DA1	unknown	unknown	gnl|CDD|334066
NC_009523.1|WP_041333978.1|4188886_4190425_-|sulfatase	unknown	unknown	gnl|CDD|293767
NC_009523.1|WP_011958035.1|4178383_4179589_-|cysteine--tRNA-ligase	unknown	unknown	gnl|CDD|223293
NC_009523.1|WP_157041358.1|4192173_4193265_+|chromosome-partitioning-protein	unknown	unknown	gnl|CDD|349755
NC_009523.1|WP_011958043.1|4188052_4188883_-|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl|CDD|234599
NC_009523.1|WP_011958027.1|4173331_4174537_+|elongation-factor-Tu	unknown	unknown	gnl|CDD|234596
NC_009523.1|WP_011958041.1|4186391_4187798_-|phosphodiesterase	unknown	unknown	gnl|CDD|225914
NC_009523.1|WP_011958030.1|4175521_4175947_+|50S-ribosomal-protein-L11	unknown	unknown	gnl|CDD|234661
NC_009523.1|WP_011958045.1|4190626_4192081_+|aspartate-ammonia-lyase	unknown	unknown	gnl|CDD|237031

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958032.1|4176954_4177515_+|50S-ribosomal-protein-L10	gnl|CDD|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	1.22842e-59
NC_009523.1|WP_011958037.1|4180854_4182075_+|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41431e-24
NC_009523.1|WP_011958040.1|4184641_4186378_-|bifunctional-sulfate-adenylyltransferase/adenylylsulfate-kinase	gnl|CDD|180124	PRK05537, PRK05537, bifunctional sulfate adenylyltransferase/adenylylsulfate kinase.	0
NC_009523.1|WP_041335647.1|4194221_4194992_+|NAD-dependent-protein-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	2.29571e-94
NC_009523.1|WP_011958031.1|4176000_4176723_+|50S-ribosomal-protein-L1	gnl|CDD|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.75298e-142
NC_009523.1|WP_011958039.1|4183640_4184543_-|phosphotransferase	gnl|CDD|213993	cd07438, PHP_HisPPase_AMP, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase (HisPPase) AMP bound. The PHP domain of this HisPPase family has an unknown function. It has a second domain inserted in the middle that binds adenosine 5-monophosphate (AMP). The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to give histidinol. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to the other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	2.27651e-12
NC_009523.1|WP_011958033.1|4177597_4178020_+|50S-ribosomal-protein-L7/L12	gnl|CDD|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	3.51749e-42
NC_009523.1|WP_011958028.1|4174633_4174888_+|preprotein-translocase-subunit-SecE	gnl|CDD|376355	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex. SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex.	3.23354e-16
NC_009523.1|WP_011958029.1|4174911_4175496_+|transcription-termination/antitermination-protein-NusG	gnl|CDD|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	2.34868e-90
NC_009523.1|WP_011958038.1|4182654_4183572_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl|CDD|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	2.35311e-158
NC_009523.1|WP_011958036.1|4179730_4180843_+|glycosyltransferase-family-4-protein	gnl|CDD|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	4.53405e-123
NC_009523.1|WP_011958047.1|4193278_4194004_-|protein-DA1	gnl|CDD|334066	pfam00412, LIM, LIM domain. This family represents two copies of the LIM structural domain.	1.07412e-05
NC_009523.1|WP_041333978.1|4188886_4190425_-|sulfatase	gnl|CDD|293767	cd16148, sulfatase_like, uncharacterized sulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	3.42016e-58
NC_009523.1|WP_011958035.1|4178383_4179589_-|cysteine--tRNA-ligase	gnl|CDD|223293	COG0215, CysS, Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	8.79621e-160
NC_009523.1|WP_157041358.1|4192173_4193265_+|chromosome-partitioning-protein	gnl|CDD|349755	cd02035, ArsA, Arsenical pump-driving ATPase ArsA. ArsA ATPase functions as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes, respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.	7.20813e-21
NC_009523.1|WP_011958043.1|4188052_4188883_-|prolipoprotein-diacylglyceryl-transferase	gnl|CDD|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	9.13934e-83
NC_009523.1|WP_011958027.1|4173331_4174537_+|elongation-factor-Tu	gnl|CDD|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	0
NC_009523.1|WP_011958041.1|4186391_4187798_-|phosphodiesterase	gnl|CDD|225914	COG3379, COG3379, Uncharacterized conserved protein [Function unknown].	5.13469e-128
NC_009523.1|WP_011958030.1|4175521_4175947_+|50S-ribosomal-protein-L11	gnl|CDD|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	3.93098e-85
NC_009523.1|WP_011958045.1|4190626_4192081_+|aspartate-ammonia-lyase	gnl|CDD|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0

Protein sequences

>NC_009523.1|WP_011958037.1|4180854_4182075_+|MFS-transporter
MFSFAARARATIARISPQVWRVLTHSLLFGLAGSIADLLFNFYLVSLGYGADTAGLMATVYRGAGALLGLPLGILIDRFGARALLVVGAIGFGIAYALVLMVSQLWALILFVFLAGAANVLTLTAVVPLLTGITDEEERAAVFGMNASAGLIIGLVGSGVGGLLPGTAALFLGVATNDTAAYRMALSIVVVLGCLSALPVLIGFRARQPVFSPAPLVAAPQRHMPPMRLVRFALPSLLLGIGGGLFLPFQNLFFRTVFGLNDAVVGVMLAMGALGMGLGALMGAPVAARLGLRRAASSLRFGAVFAVTLMFAPVLPVVVVGYMLRGAFVAASYPLNDALVMQLTPLRQRGIAISLMSVLWSLGWSAAAWISGHIQVHYGFTPVLAASLVAYALSAWAIWTLREEGR
>NC_009523.1|WP_011958036.1|4179730_4180843_+|glycosyltransferase-family-4-protein
MHTGIDISRIATTARTGTEQYTCEVLAAIARLDTTNTYTLYCQRLPTTLPPLGANMRMRCIPLPRLWTHVRLSVEVLRHAPDVLFIPAHVLPLGAPLVRRMRTVVTIHDLGYLRYPEAHTTAQRLYLRLSTVWSARAASHLIAVSEATRNDLVRLAKVSPARVTVVHHGVADRFRQPVVDLGRARKIAGGNEPYFLYVGTVQPRKNLERVIEAFADASAQLTDQGRTPVLVIAGKRGWLSERIAQRAAALGIADRVRFVGYVADEDLPALYRASLAFVFPSLYEGFGMPVLEAMACGAPVLTSNSSSLPEVAGDAALLVDPHDTGAIAAGMVRLARDEALREELQQHGYRRAAQFTWDRCAEETLRVLYG
>NC_009523.1|WP_011958035.1|4178383_4179589_-|cysteine--tRNA-ligase
MWLFDTLRGQKAELLIPRDRPLTLYVCGVTPYDTTHVGHAHTFLIFDVLIRYIRHCGGTVRYCQNTTDVDDPLFERAARDGIPWDELARRETEQFVKDCRALNLIPPDFFPKASEEIAAMIPIIERLIELGHAYVRNGNVYYDVSTEPTYGAMARVSGYEELLALANERGNNPNDPLKDDPLDFVLWQRSRPGEPTWPSPWGRGRPGWHIECTAMATRYLGPQLDIHGGGRDLIFPHHPSEIVQTEPYTGKRPFVHFWVHGGLAWLDGQKMSKSLGNLVFIKDALRQHSADALRWYLLSFPYRDDFEYVRSDVPQAEQKVGQLKAALAAQGDPRGERLNPEPFRQAYFAALDDDLDTPKALAQISVLSGAILEAASSGYDVSDAQSALRDMANVFGFWAAA
>NC_009523.1|WP_011958033.1|4177597_4178020_+|50S-ribosomal-protein-L7/L12
MASAKVEAVIASIEALNVLELVELKKELESRWGVTAAAPVMPMGGMVMPAAAAAPAGGDGAAAAAPAVEEKTEFDVILSAIGPNKIQVIKAVRELTNLGLKEAKDLVEGAPKPVKEGVSKEEAEAAKAKLVEAGATVEIK
>NC_009523.1|WP_011958032.1|4176954_4177515_+|50S-ribosomal-protein-L10
MPTQRKIETVADLKQRLKRMQVTVVADYRGLSVADMTELRKKLRESGAEFVVAKNTLTLIAARETGHEAIEPLLAGPTALAFAYDDVPKFVKAINEFNRGPKKIIVRGGLVGTMLLNENVLDTVASLPTKEEVRAQVLGGLAAPVTGLAGIIAAPVNDIVNLLDATSKSILYALQARIDQLQPSAS
>NC_009523.1|WP_011958031.1|4176000_4176723_+|50S-ribosomal-protein-L1
MPRRHGKKYLEALKKIDRQRLYTPEEAIKLLKETSFTTFDPTVEVHLRLGIDPRHADQTIRSTVSLPHGTGKTVRVLVFAQGEAAQAAREAGADFVGADDLIARIDKENFFDFDIAIATPDMMGKVGRLGRKLGPRGLMPNPKSGTVVQPDDLPRTIREVRGGRVEFRNDKTGLLHVAVGKLSFNEQQIYENIAALMEAVKAARPSAAKGTYIKSVTFTSTMSPGIRVDPSAAQAMSPAA
>NC_009523.1|WP_011958030.1|4175521_4175947_+|50S-ribosomal-protein-L11
MAKKVTGVVKLQLPAGKATPAPPVGPALGGYGINIMAFVKEYNEKTASQAGSVVPVEVTVYSDRSFTITLKTPPAADLLRKVAGIEKGSGTPNRKIAGTITKKQLRQVAEQKMADLNAFDIEAAEKIIAGTARSMGIKIVD
>NC_009523.1|WP_011958029.1|4174911_4175496_+|transcription-termination/antitermination-protein-NusG
MTEEKKNQETSTESEIRDDDRRWYVIHTYSGYENKVKQNLLHRIETMEMRDQIFNVIVPTEEEIEIKNGQRRTVQKKVFPGYVLVQMKMNDNSWYVVRNTPGVTSFVGHGNKPTPLEESEVKAILRQMEQEAPKVKVSYQVGQAVKITDGPFTDFEGVVDAIDHERGRVRVLVSFFGREAPVELDFLQVTRLVE
>NC_009523.1|WP_011958028.1|4174633_4174888_+|preprotein-translocase-subunit-SecE
MTVVKDKEKESQNALVRAFQQGIVQPLRESRAEMRKVVWPTREETIRLTVVVILLSAIMSAILFAADALFSWLLLLLQNAVANL
>NC_009523.1|WP_011958027.1|4173331_4174537_+|elongation-factor-Tu
MAKQKFERTKPHVNVGTIGHVDHGKTTLTAAITKVLALQGAAQFVSYDQIDNAPEERARGITIAIRHVEYQTARRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAPDGPMPQTREHVLLARQVQVPAMVVFLNKVDMMDDEELLELVELELRELLSNHGFPGDEVPIVRGSALAALSSASTDINAPEYKCILDLMNAVDEYIPTPVREIDKPFLMPIEDVFGIKGRGTVVTGRIERGKVKMGDTVEIIGMTHEAPRRTVVTGVEMFQKTLDEGIAGDNVGVLLRGIERTEVERGQVLAAPGSIKPHATFKANVYVLKKEEGGRHTPFFSGYRPQFYIRTTDVTGAIHLPEGVEMVMPGDNIEMTVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD
>NC_009523.1|WP_011958038.1|4182654_4183572_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MIPLIAIVGPTAVGKTALSIRLAQQFNGEIVSVDSRQVYRGMDIGTAKPTPAERAAVPHHLIDIVDPDEAFSLAVYQDLATAAIADIAARGRLPFLVGGTGQYLAAVLQGWQLPRVAPRPDIRAALERQAAELGAAALYARLAEIDPAAAASIPPNNIRRIIRALEVYEATGKPISEQRSVQPPPYHTVTIWLTLPTPALYARIDARVEAMIAAGLLDEVHRLLERGYHWDLPSMSGLGYREFRPYFEGRITLDEAIARLKYDTHAFARRQPAWFRRLPNVLTLPADASDLQQQAATIVRQWIDA
>NC_009523.1|WP_011958039.1|4183640_4184543_-|phosphotransferase
MNNLPFRKPGRFYRGNLHTHSNRSDGELPPEEVIAAYRAQGYDFLALTDHFLPQYNFPITDTRAFRDARFTTLPGAELHAPQTSAGRLWHIIAVGLPHDFAPPTPDETGPALAARAAAAGAFVGIAHPAWYTLTLDDGLSLEAAHAVEVFNATSVWDNDRGDGWYFCDMLLARGRRLLAYAADDAHFSIRPDTFVGWVEVRAEELSPEAILDALKQGAFYSTQGPRIEDIDIAERSLAVRCSPACAVFVVGPDERAQRQLGQAITSCTLSVPWIGEVPYIRVTVVDDAGRKAWTNPIWVG
>NC_009523.1|WP_011958040.1|4184641_4186378_-|bifunctional-sulfate-adenylyltransferase/adenylylsulfate-kinase
MPLIPPYGGRLINLLVASEERRALLEEAARLPSIQISPRSLCDLELLATGGFSPLDRFMGRADYERVLHDMRLAGGTLFPLPITLPVSGKTLARSGDRVALRDARNELIAVMDVEEAFTWNAEEEARLTLGTTDPRHPLVSEMSTWGDTYISGALRVVRLPRYYDFVELRRTPAEVRSILHEMGAERVVAFQTRNPLHRVHEELTKRAAAEVGGALLIHPVVGLTRPGDIDHYSRVRIYRALVERYYDPRRTLLSLLPLAMRMAGPREALWHAIIRRNFGATHFIVGRDHAGPGLDSRGKPFYGPYDAQELVARYANEIGVTMVPFREYVYLPDTDQYVEETAVPQGARVWTISGTQVREEYLARGKRLPEWFTRPETAAILAQSYPPRHRQGFCVWFTGLSGAGKSTIAEALVAMLLERGRQSTLLDGDVVRTHLSKGLGFSREDRDTNILRIGFVAGEIARHGGVAICAAISPYRAARNECRKMVGEDRFFEVFVDTPIEECERRDTKGMYARARRGEITGFTGIDDPYEPPVAPEVHLTTVDTTPEECARRIIALLEERGFLTRPDQDGVSGATG
>NC_009523.1|WP_011958041.1|4186391_4187798_-|phosphodiesterase
MTHPRLLIIGLDCAEPSLVFDRWRADLPALNRLMTEGVYGELESCIPAITVPAWSCMMSGRDPGELGVYGFRNRVDRSYGRMVVADSRAIRFPRLWDILGEAGWRVAVIGVPGAYPPSAVNGALVSCFLAPSTDVTYTFPPALAERLAVWAAKATPGRAYLLDVPDFRSDDKERIVRDIYAMCDQRFAVAAALIEEDHPDFLMLVDMGVDRIHHALWKHMDPRHPLFVPDSPFADAIHAYYRHVDAQIAALLTHCGPETAVLVVSDHGARPLMGGVRINQWLIAQGDLTLHTMPDVPTNLDQVDVDWSRTRAWGAGGYYGRIFLNVRGREPQGVIPPAEYERVRADLAARLEAMPGPDGHPLGNRVFVPQRLYRVVRGVAPDLIVYFGDLAWRAVGTVGGDGIFTQENDTGPDDANHAQHGLFIWRDPQRPGGGRRLDNAQIYDILPTLLRRFNMPVPAGLRGTMLEL
>NC_009523.1|WP_011958043.1|4188052_4188883_-|prolipoprotein-diacylglyceryl-transferase
MYPPVDPVIIQLGPLTLRWYGVLIMTGVMLAAWVGSRHIERRGFDRDSVWDLLLWVLIPGLIGARLYYVFIQSPRGPEGLGRFLSNPASILAVWEGGLHIFGGFIFGALGLWAFARMRKAPLLVYADAIALGLPLGQAIGRWANFINQELYGPPTTLPWGLRIDAEHRIGPYRDLAAFPETTRFHPLFLYESLWNLIGFAVIFSIWRRYGGRLRDGDVLLMYLIWYPLGRFFIEFLRTDSWFFPGTPFNVVHVLSFAAIVGAAALLYRRHGQRQEA
>NC_009523.1|WP_041333978.1|4188886_4190425_-|sulfatase
MSRRPDIVLLVLDTQRCDRLSCYGYSRPTSPCLDELAAEATLFRRVFATAQWTIPSHASMFTGLYPSEHATNQSSAALPSGIPTLAERLREGGYMTAAFCNNPLVGVVNNGLRRGFESFLNYSGLLTSRPNQAGAHPGLISRYRQWFKGRLAATLNRIQNSFARSEFMLEFAFTPLMVPIWQTALSFKGNTPKSLSDAARLLIERRGVEPNQPIFAFINLMGVHTPYHPDRRMLERFAPDVIRDREAARYVRRFNGDVFGWLAPFSSIDERYHHVLSDVYDAEVATQDAHLGVFLRRMRESGALDRTLLLVCADHGDHLGEKGLVGHTVSVYNELIHVPLMVRDPDGDFPRGAVVDHPVSLRRVFHTLLSAARLASGVERDRSLAQSPAADPDGGTVFSEAEPLQNVLGIMLRRQPDRARARRFDQPRRAVINGSHKLIQTGEDQVELYDLDADPRETVDLAAMLPERVEELQARLSAFVRRADATAPLIRRAEGVDDPTVQRRLRELGYLE
>NC_009523.1|WP_011958045.1|4190626_4192081_+|aspartate-ammonia-lyase
MSEAFRIEKDSLGEVRVPANALYGAQTQRAVMNFPVSGMRPYPAFVWAQAMIKRAAAEVNRDLGLFNDVTIGDRTISGRQIADAIIQAADEVLDGQHADQFVVDPFQAGAGTSHNMNLNEVIANRANQILGFALDDPKKPVSPNDHVNMAQSTNDTIPTAIRLGCLWRLDELLAAIDRLADALEAKAQEFDPIVKSGRTHLQDAVPVRLGQEFGAYALAVRNDRERIESAADRLRRLGIGGTAVGSGLNAHPEYHGRMVKRLSELTGQELRSAGNLFEAMQSMADPADFSASLRTLCITLTRIANDLRLLASGPTTGLDEIRLPAVQPGSSIMPGKVNPVLAEMLNMACFHVQGCDLTVSLAAQAGQLELNVMMPIIAHNLFEMMHVLIGAINAFTEKCVVGITANPEKATGWLAKNPILVTALNPVIGYLNGAAVAKEALASGKTIKEVVVEKGLLSPEQVDELLDVRAMTEGGIMGIGGGGG
>NC_009523.1|WP_157041358.1|4192173_4193265_+|chromosome-partitioning-protein
MYTGSPGIGISVAAAAEAARAADAGKRTLLFAYRSTVGLSALLGVPVSSTPTDVAPRLEAMALDTRSELAAAWNETRATLPPPFSALAGDELPQPPASDAAFALLRLRELAPKYERIVVDAGPHHALIEALGVPDNLRWIAKWLIGLDGQPAQGPLLPGMLLPPEFTSNMRRVLNEAQRLRSLLDAPASSVCYVLRPDAAALAEARLAIPAIQLHGLAIGALVVGPLLPTNPDDARLAPLERLQAALVDEAAALWRTRPLLKLDIGATTGGHMPLLLAGRAMGDAGAANVRAPIGNDYRGEAALTVELPGLPQGAIGLTLSGDDLIVRIGPYRRCVPLPTRLRGTSAIRATREGDLLIVRRRT
>NC_009523.1|WP_011958047.1|4193278_4194004_-|protein-DA1
MTTHSINIPDALRCAACGALLIDGYYFIHGRRERYCARCIRERDRCDVCSAPLGDRYWTLHDGRRLCETCHATAIYDPSVAQQLFNETVAAIVAQLGMALRVGVDFRLVDAPTLAAVRAQDKPPQPGEAPALGLYQRHGRLRVIYMLYGLPKLLFRTVVAHEYAHAWQGENCPLLNDHDLIEGFAEWVAYHHLGYLGSHKAAAAMRESNHPYRPLLERMLALEAQIGPAGVLEYMRRAGVR
>NC_009523.1|WP_041335647.1|4194221_4194992_+|NAD-dependent-protein-deacylase
MDQAAIRHAADLLGRAHSAVAITGAGISTPSGIPDFRGPDGAWKHVDPSEVASLHNFLRNPRAFYDWFRPLLDRVLAAAPNAAHYALAALEQHRTLRAIITQNFDGLHQRAGSREVYELHGHLRTATCLECERQIPTQALLPRIRRGEPPRCSCGHPLKPDVVLFDEMLPRGLYWLARRAVEHADVIIVAGTSLEVFPVNDLPALGLRHGAKLIIINNGPTYLDGRAEAVIRGDVAIALPELVRQTTGAHLLERSR

Crispr_ID: NC_009523_78

• CRISPR_ID: NC_009523_78
• CRISPR_location: 4198466-4199161
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 13 spacers

Consensus repeat of NC_009523_78

Consensus_repeat	Method
CGNNNGCGTCGGCGTATT	CRT

spacers of NC_009523_78

>78.1|4198484|54|NC_009523|CRT
CGTGCGTGTCGGCGTGTTCGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATT
>78.2|4198556|36|NC_009523|CRT
CGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATT
>78.3|4198610|54|NC_009523|CRT
CGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATTCGTGCGCGTCGGCGTATT
>78.4|4198682|48|NC_009523|CRT
CGTGCGCGTCGGCGTGGGCGTGCGTGTTGGGCTGGGTGTCCGCGTATT
>78.5|4198748|18|NC_009523|CRT
CGACGGCGTCAGGGTATT
>78.6|4198784|30|NC_009523|CRT
CGACGGCGTCAGGGTATTCGTCGGCGTGTT
>78.7|4198832|36|NC_009523|CRT
CGTGCGCGTCGGCGTGTTCGTGCGCGTCGGGGTGTT
>78.8|4198886|30|NC_009523|CRT
CGTGCGTGTCGGCGTGTTTGTCGGTGTGTT
>78.9|4198934|36|NC_009523|CRT
TGTCGATGTCGGCGTATTCGAGGGCGTGGGCGTGCT
>78.10|4198988|18|NC_009523|CRT
TGTGCGTGTCGGTGTGCT
>78.11|4199024|48|NC_009523|CRT
CGTGGGGGTGCTCGTCATCGTTGGCGTATTTGTGCGCGTCGGTGTGTT
>78.12|4199090|18|NC_009523|CRT
TGTCCGCGTCGGCGTGTT
>78.13|4199126|18|NC_009523|CRT
TGTCGGTGTTGCGGTATC

CRISPR arrays and Neighbor proteins around NC_009523_78

CRISPR arrays

The CRISPR arrays of NC_009523_78

>merge|NC_009523|78|4198466-4199161|CRT
CGTGTGCGTTGGCGTATTCGTGCGTGTCGGCGTGTTCGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATTCGTGCGCGTCGGCGTATTCGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATTCGTGCGCGTCGGCGTGTTCGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATTCGTGCGCGTCGGCGTATTCGTGCGCGTCGGCGTATTCGTGCGCGTCGGCGTGGGCGTGCGTGTTGGGCTGGGTGTCCGCGTATTGGACGGCGTCGGCGTGTTCGACGGCGTCAGGGTATTCGAGGGCGTCGGCGTGTTCGACGGCGTCAGGGTATTCGTCGGCGTGTTCGTGCGTGTCGGCGTATTCGTGCGCGTCGGCGTGTTCGTGCGCGTCGGGGTGTTCGACGGCGTCGGTGTATTCGTGCGTGTCGGCGTGTTTGTCGGTGTGTTCGACGGCGTCGGCGTATTTGTCGATGTCGGCGTATTCGAGGGCGTGGGCGTGCTCGACGGCGTCGGCGTATTTGTGCGTGTCGGTGTGCTCGACGGCGTCGGCGTATTCGTGGGGGTGCTCGTCATCGTTGGCGTATTTGTGCGCGTCGGTGTGTTCGTCGGCGTTGGCGTATTTGTCCGCGTCGGCGTGTTCGTCGGTGTGGACGTATTTGTCGGTGTTGCGGTATCCGTTGGGGTCGGCGTGTT

>NC_009523|78|10|4198466-4199161|CRT
CGTGTGCGTTGGCGTATT	CGTGCGTGTCGGCGTGTTCGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATT
CGTGCGCGTCGGCGTATT	CGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATT
CGTGCGCGTCGGCGTGTT	CGACGGCGTTGGTGTGTTTGTGCGCGTCGGCGTATTCGTGCGCGTCGGCGTATT
CGTGCGCGTCGGCGTATT	CGTGCGCGTCGGCGTGGGCGTGCGTGTTGGGCTGGGTGTCCGCGTATT
GGACGGCGTCGGCGTGTT	CGACGGCGTCAGGGTATT
CGAGGGCGTCGGCGTGTT	CGACGGCGTCAGGGTATTCGTCGGCGTGTT
CGTGCGTGTCGGCGTATT	CGTGCGCGTCGGCGTGTTCGTGCGCGTCGGGGTGTT
CGACGGCGTCGGTGTATT	CGTGCGTGTCGGCGTGTTTGTCGGTGTGTT
CGACGGCGTCGGCGTATT	TGTCGATGTCGGCGTATTCGAGGGCGTGGGCGTGCT
CGACGGCGTCGGCGTATT	TGTGCGTGTCGGTGTGCT
CGACGGCGTCGGCGTATT	CGTGGGGGTGCTCGTCATCGTTGGCGTATTTGTGCGCGTCGGTGTGTT
CGTCGGCGTTGGCGTATT	TGTCCGCGTCGGCGTGTT
CGTCGGTGTGGACGTATT	TGTCGGTGTTGCGGTATC
CGTTGGGGTCGGCGTGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958043.1|4188052_4188883_-|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl|CDD|234599
NC_009523.1|WP_041335647.1|4194221_4194992_+|NAD-dependent-protein-deacylase	unknown	unknown	gnl|CDD|234777
NC_009523.1|WP_011958053.1|4199766_4201056_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238733
NC_009523.1|WP_011958060.1|4207568_4208774_+|two-component-sensor-histidine-kinase	unknown	unknown	gnl|CDD|226702
NC_009523.1|WP_011958050.1|4196183_4197362_-|hypothetical-protein	unknown	unknown	gnl|CDD|379164
NC_009523.1|WP_011958056.1|4202966_4204382_-|CpaF-family-protein	unknown	unknown	gnl|CDD|227297
NC_009523.1|WP_011958057.1|4204396_4205656_-|MinD/ParA-family-protein	unknown	unknown	gnl|CDD|349765
NC_009523.1|WP_041333978.1|4188886_4190425_-|sulfatase	unknown	unknown	gnl|CDD|293767
NC_009523.1|WP_157041132.1|4208785_4209661_+|response-regulator	unknown	unknown	gnl|CDD|381085
NC_009523.1|WP_011958062.1|4209895_4210201_+|circadian-clock-protein-KaiB	unknown	unknown	gnl|CDD|181770
NC_009523.1|WP_157041129.1|4197358_4197757_-|pilus-assembly-protein	unknown	unknown	gnl|CDD|377921
NC_009523.1|WP_011958058.1|4205693_4206476_-|Flp-pilus-assembly-protein-CpaB	unknown	unknown	gnl|CDD|274472
NC_009523.1|WP_157041128.1|4195006_4196114_+|peptide-chain-release-factor-2	unknown	unknown	gnl|CDD|234799
NC_009523.1|WP_011958059.1|4207009_4207378_-|response-regulator	unknown	unknown	gnl|CDD|225114
NC_009523.1|WP_011958054.1|4201052_4201982_-|type-II-secretion-system-F-family-protein	unknown	unknown	gnl|CDD|224975
NC_009523.1|WP_157041358.1|4192173_4193265_+|chromosome-partitioning-protein	unknown	unknown	gnl|CDD|349755
NC_009523.1|WP_011958041.1|4186391_4187798_-|phosphodiesterase	unknown	unknown	gnl|CDD|225914
NC_009523.1|WP_157041131.1|4201981_4202953_-|secretion-system-protein	unknown	unknown	gnl|CDD|227300
NC_009523.1|WP_011958047.1|4193278_4194004_-|protein-DA1	unknown	unknown	gnl|CDD|334066
NC_009523.1|WP_011958045.1|4190626_4192081_+|aspartate-ammonia-lyase	unknown	unknown	gnl|CDD|237031

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958043.1|4188052_4188883_-|prolipoprotein-diacylglyceryl-transferase	gnl|CDD|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	9.13934e-83
NC_009523.1|WP_041335647.1|4194221_4194992_+|NAD-dependent-protein-deacylase	gnl|CDD|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	2.29571e-94
NC_009523.1|WP_011958053.1|4199766_4201056_-|VWA-domain-containing-protein	gnl|CDD|238733	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the members of this subgroup. All members of this subgroup however have a conserved MIDAS motif. .	1.75871e-21
NC_009523.1|WP_011958060.1|4207568_4208774_+|two-component-sensor-histidine-kinase	gnl|CDD|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	3.76946e-70
NC_009523.1|WP_011958050.1|4196183_4197362_-|hypothetical-protein	gnl|CDD|379164	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like. This is an N-terminal domain on a family of putative Flp pilus-assembly proteins. The exact function is not known. The Flp-pilus biogenesis genes include the Tad genes, and some members of this family are putatively assigned as being TadG.	6.10436e-05
NC_009523.1|WP_011958056.1|4202966_4204382_-|CpaF-family-protein	gnl|CDD|227297	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion].	1.00417e-152
NC_009523.1|WP_011958057.1|4204396_4205656_-|MinD/ParA-family-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	6.96015e-51
NC_009523.1|WP_041333978.1|4188886_4190425_-|sulfatase	gnl|CDD|293767	cd16148, sulfatase_like, uncharacterized sulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	3.42016e-58
NC_009523.1|WP_157041132.1|4208785_4209661_+|response-regulator	gnl|CDD|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	8.10365e-21
NC_009523.1|WP_011958062.1|4209895_4210201_+|circadian-clock-protein-KaiB	gnl|CDD|181770	PRK09301, PRK09301, circadian clock protein KaiB; Provisional.	5.82367e-34
NC_009523.1|WP_157041129.1|4197358_4197757_-|pilus-assembly-protein	gnl|CDD|377921	pfam07811, TadE, TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.	2.56562e-09
NC_009523.1|WP_011958058.1|4205693_4206476_-|Flp-pilus-assembly-protein-CpaB	gnl|CDD|274472	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB. Members of this protein family are the CpaB protein of Flp-type pilus assembly. Similar proteins include the FlgA protein of bacterial flagellum biosynthesis.	1.39614e-21
NC_009523.1|WP_157041128.1|4195006_4196114_+|peptide-chain-release-factor-2	gnl|CDD|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NC_009523.1|WP_011958059.1|4207009_4207378_-|response-regulator	gnl|CDD|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	7.45397e-25
NC_009523.1|WP_011958054.1|4201052_4201982_-|type-II-secretion-system-F-family-protein	gnl|CDD|224975	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion].	1.93532e-17
NC_009523.1|WP_157041358.1|4192173_4193265_+|chromosome-partitioning-protein	gnl|CDD|349755	cd02035, ArsA, Arsenical pump-driving ATPase ArsA. ArsA ATPase functions as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes, respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.	7.20813e-21
NC_009523.1|WP_011958041.1|4186391_4187798_-|phosphodiesterase	gnl|CDD|225914	COG3379, COG3379, Uncharacterized conserved protein [Function unknown].	5.13469e-128
NC_009523.1|WP_157041131.1|4201981_4202953_-|secretion-system-protein	gnl|CDD|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	1.74681e-46
NC_009523.1|WP_011958047.1|4193278_4194004_-|protein-DA1	gnl|CDD|334066	pfam00412, LIM, LIM domain. This family represents two copies of the LIM structural domain.	1.07412e-05
NC_009523.1|WP_011958045.1|4190626_4192081_+|aspartate-ammonia-lyase	gnl|CDD|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0

Protein sequences

>NC_009523.1|WP_157041129.1|4197358_4197757_-|pilus-assembly-protein
MKRTPGQSIIEFAVIAPILIIMLLGTVDFALAFSNQMALRSAVAEGGYVIAQHPGNEAMAERHIRERLQALPGAGEPGRLIVAFTTSACVAGRQDTTVEAMYRHEFWFSSVLPAAQITLRSGTTVPQFGSCS
>NC_009523.1|WP_011958050.1|4196183_4197362_-|hypothetical-protein
MRRLRRTEFQPGQAIPVLALTLLLLIAFAGLAIDGALAFAWRRNVMNSADGAALIATRALIVDRGSVNGIAITNAVRTYLQAELGVDNPDFELTYVNGAGQSMGTVDSSPAPVNARGIGIVVRHTFDTYLMGILGQPTLTVRGVSAARFGNGGMLIGDLIAPMGLLPEAAEFFRSNPTSALVDLSGFLEERNDQIRTDFLNGMYPYLERPEDHPDWVDPDTFVKRWQVRAVALRMGSATPPSLGPGASCPATPADTLKSWWCFGAHRQVNTRIAGDGDQVALAMDLIGVEPYASSLNATLLSGGFLDARLNQVIIVPVLAEASDSDQWSGASPVYVIEYFMALRLTDIDYASGTITVDYLPRYLTNGGLMGSNNNVERGAPCEVCVVNLVRE
>NC_009523.1|WP_157041128.1|4195006_4196114_+|peptide-chain-release-factor-2
MTTTDLEVLRTRFDSVRGRLDLPTKQREIAALEERAADPDLWNDPREAQTIMQRLTRLKEEVERIEAIDRQLTALADLIELAAAEDDDSLQADIAAELKRTGEAIEALEIEVLLNGPYDDRDAFLSIKAGTGGTDAQDWAEMLLRMYMRWGERRGFQVALIDKSEGEEAGIKSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRPEDIRIDVFRSSGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRGRLLERELQRKREERARLRGEYRQADFGNQMRTYYLHPYTLVKDHRTDHETSDVHAVLDGDIDPFIEAYLRWNVGRDA
>NC_009523.1|WP_041335647.1|4194221_4194992_+|NAD-dependent-protein-deacylase
MDQAAIRHAADLLGRAHSAVAITGAGISTPSGIPDFRGPDGAWKHVDPSEVASLHNFLRNPRAFYDWFRPLLDRVLAAAPNAAHYALAALEQHRTLRAIITQNFDGLHQRAGSREVYELHGHLRTATCLECERQIPTQALLPRIRRGEPPRCSCGHPLKPDVVLFDEMLPRGLYWLARRAVEHADVIIVAGTSLEVFPVNDLPALGLRHGAKLIIINNGPTYLDGRAEAVIRGDVAIALPELVRQTTGAHLLERSR
>NC_009523.1|WP_011958047.1|4193278_4194004_-|protein-DA1
MTTHSINIPDALRCAACGALLIDGYYFIHGRRERYCARCIRERDRCDVCSAPLGDRYWTLHDGRRLCETCHATAIYDPSVAQQLFNETVAAIVAQLGMALRVGVDFRLVDAPTLAAVRAQDKPPQPGEAPALGLYQRHGRLRVIYMLYGLPKLLFRTVVAHEYAHAWQGENCPLLNDHDLIEGFAEWVAYHHLGYLGSHKAAAAMRESNHPYRPLLERMLALEAQIGPAGVLEYMRRAGVR
>NC_009523.1|WP_157041358.1|4192173_4193265_+|chromosome-partitioning-protein
MYTGSPGIGISVAAAAEAARAADAGKRTLLFAYRSTVGLSALLGVPVSSTPTDVAPRLEAMALDTRSELAAAWNETRATLPPPFSALAGDELPQPPASDAAFALLRLRELAPKYERIVVDAGPHHALIEALGVPDNLRWIAKWLIGLDGQPAQGPLLPGMLLPPEFTSNMRRVLNEAQRLRSLLDAPASSVCYVLRPDAAALAEARLAIPAIQLHGLAIGALVVGPLLPTNPDDARLAPLERLQAALVDEAAALWRTRPLLKLDIGATTGGHMPLLLAGRAMGDAGAANVRAPIGNDYRGEAALTVELPGLPQGAIGLTLSGDDLIVRIGPYRRCVPLPTRLRGTSAIRATREGDLLIVRRRT
>NC_009523.1|WP_011958045.1|4190626_4192081_+|aspartate-ammonia-lyase
MSEAFRIEKDSLGEVRVPANALYGAQTQRAVMNFPVSGMRPYPAFVWAQAMIKRAAAEVNRDLGLFNDVTIGDRTISGRQIADAIIQAADEVLDGQHADQFVVDPFQAGAGTSHNMNLNEVIANRANQILGFALDDPKKPVSPNDHVNMAQSTNDTIPTAIRLGCLWRLDELLAAIDRLADALEAKAQEFDPIVKSGRTHLQDAVPVRLGQEFGAYALAVRNDRERIESAADRLRRLGIGGTAVGSGLNAHPEYHGRMVKRLSELTGQELRSAGNLFEAMQSMADPADFSASLRTLCITLTRIANDLRLLASGPTTGLDEIRLPAVQPGSSIMPGKVNPVLAEMLNMACFHVQGCDLTVSLAAQAGQLELNVMMPIIAHNLFEMMHVLIGAINAFTEKCVVGITANPEKATGWLAKNPILVTALNPVIGYLNGAAVAKEALASGKTIKEVVVEKGLLSPEQVDELLDVRAMTEGGIMGIGGGGG
>NC_009523.1|WP_041333978.1|4188886_4190425_-|sulfatase
MSRRPDIVLLVLDTQRCDRLSCYGYSRPTSPCLDELAAEATLFRRVFATAQWTIPSHASMFTGLYPSEHATNQSSAALPSGIPTLAERLREGGYMTAAFCNNPLVGVVNNGLRRGFESFLNYSGLLTSRPNQAGAHPGLISRYRQWFKGRLAATLNRIQNSFARSEFMLEFAFTPLMVPIWQTALSFKGNTPKSLSDAARLLIERRGVEPNQPIFAFINLMGVHTPYHPDRRMLERFAPDVIRDREAARYVRRFNGDVFGWLAPFSSIDERYHHVLSDVYDAEVATQDAHLGVFLRRMRESGALDRTLLLVCADHGDHLGEKGLVGHTVSVYNELIHVPLMVRDPDGDFPRGAVVDHPVSLRRVFHTLLSAARLASGVERDRSLAQSPAADPDGGTVFSEAEPLQNVLGIMLRRQPDRARARRFDQPRRAVINGSHKLIQTGEDQVELYDLDADPRETVDLAAMLPERVEELQARLSAFVRRADATAPLIRRAEGVDDPTVQRRLRELGYLE
>NC_009523.1|WP_011958043.1|4188052_4188883_-|prolipoprotein-diacylglyceryl-transferase
MYPPVDPVIIQLGPLTLRWYGVLIMTGVMLAAWVGSRHIERRGFDRDSVWDLLLWVLIPGLIGARLYYVFIQSPRGPEGLGRFLSNPASILAVWEGGLHIFGGFIFGALGLWAFARMRKAPLLVYADAIALGLPLGQAIGRWANFINQELYGPPTTLPWGLRIDAEHRIGPYRDLAAFPETTRFHPLFLYESLWNLIGFAVIFSIWRRYGGRLRDGDVLLMYLIWYPLGRFFIEFLRTDSWFFPGTPFNVVHVLSFAAIVGAAALLYRRHGQRQEA
>NC_009523.1|WP_011958041.1|4186391_4187798_-|phosphodiesterase
MTHPRLLIIGLDCAEPSLVFDRWRADLPALNRLMTEGVYGELESCIPAITVPAWSCMMSGRDPGELGVYGFRNRVDRSYGRMVVADSRAIRFPRLWDILGEAGWRVAVIGVPGAYPPSAVNGALVSCFLAPSTDVTYTFPPALAERLAVWAAKATPGRAYLLDVPDFRSDDKERIVRDIYAMCDQRFAVAAALIEEDHPDFLMLVDMGVDRIHHALWKHMDPRHPLFVPDSPFADAIHAYYRHVDAQIAALLTHCGPETAVLVVSDHGARPLMGGVRINQWLIAQGDLTLHTMPDVPTNLDQVDVDWSRTRAWGAGGYYGRIFLNVRGREPQGVIPPAEYERVRADLAARLEAMPGPDGHPLGNRVFVPQRLYRVVRGVAPDLIVYFGDLAWRAVGTVGGDGIFTQENDTGPDDANHAQHGLFIWRDPQRPGGGRRLDNAQIYDILPTLLRRFNMPVPAGLRGTMLEL
>NC_009523.1|WP_011958053.1|4199766_4201056_-|VWA-domain-containing-protein
MNTERTPETDRLYEQGMAWMREARWEEAIAALSQVRALSRAYPDVDALIADAQLKLEIEQVGVPPALAPPRPHPPRAALIGGLTALTLIVAAVIIALIGRIDPSSVGSAAQPIMLSIGFPTIAPTRTPTPAPTATPIPVRPTATPAASVVLPGTLGVRMASGERLPGATRNLAIILDASGSMLARIDGAPKTVIARQALIALVERLPATTNVALRTYGHRRADDCSDTELVQAPAPIQRADLINRINAIRPVNGGRTPIAQSLEDMARDLAGVDGEVLIVLVSDGDETCGGDPVATAAALHTANPRLRVSVIGFNIEQEEWRRRLEGIAAYGGGAYFDAANAVQLADALEQAVALTYRVIDSQGNQVYQGRIGNTVTLPPGAYRVEISGDAAITFETVFVESGHTTFVELRDEQGALRASIIAGDDVAP
>NC_009523.1|WP_011958054.1|4201052_4201982_-|type-II-secretion-system-F-family-protein
MLLIPGIITALAILLVVAGLTTVRRDVTVGERLDAYLSPTVEKMNPTPSLEATKPFAERVVIPLLKRAARAFAWLLPQNRYEALRLRLAMAGYPWGVTAADFVGAKGIVLVLVTLVAGAFGWMAGAAPTFFNLLLLGGIGFCAFFLPDVWLSRRIRQRQTELLNALPDALDLLAIASAAGLSFESAMQEITSKWTNELAREFSRVLRDMSMGVPRRQALTDMAERTGVSDIASFVSAVKQAEALGISIGRVLTVQADEMRTRRRQRAQERANQAPVKMMFPLVFLIFPAIFAVLLGPAVPQLLEAFGGV
>NC_009523.1|WP_157041131.1|4201981_4202953_-|secretion-system-protein
MDVPVSLEFALPIGAALLASLASLTLLFAARSLATRDTGVDSRISAYLGGDDVARGATLNDQRIAERLNDVIKRQSFAARIEHDLAAASLPLTVPEYMLMRIAVPLIITALALLIWRQVIVVPAALIAGHLGCSFWMRMRRQRRKQEFNDQLPETLDLITASMRGGFSLVQSLASVASDVQEPTRTELRRVFQEVQLGLSVTQALDNLVQRMESADLDLVVTAIKIHARVGGNLGQILENISTTMRERAKLRREVRVITSMQRISSYVIGALPFALALIIFTINPTYMMRLFQPGLILCIPIGAFISSVVGFLIIRKIVDVRI
>NC_009523.1|WP_011958056.1|4202966_4204382_-|CpaF-family-protein
MNRFRFSRSGASNAHQAPNATPVDEPRPPIEPVRPVVARSSVPPTAHDADRDERDLIEVVQSKLIDETDTSGRREPEYYARRIAELVTEHLDRSGRVVSERERMRLIRLAQSELLGLGPLEPLLADDTISEIMVNGPYQIWVERNGKLQETDARFIDEDHVRRIIDRIISPLGRRCDETTPMVDARLPDGSRVNAIIPPLALNGSTITIRKFSRVPLTAADLVARGAASPELMDLLRACVLGRLNCIISGGTGTGKTTMLNVLSSFIPDDERIITIENAAELQLQQRHVVTLESRPANIEGRGEVTLRDLVVNALRMRPDRIIVGECRAGEALDMLQAMNTGHDGSMTTLHANSPRDALRRMETMVMMAGMDLPLRAIREQIASAINIIIQLERLQDGSRKIVQVCEVTGMENDVVSLSDLFVFQQQGVRDGRVVGRIVPTGIRPRFLEKLQQMNITLSPQVFGNVIPGVR
>NC_009523.1|WP_011958057.1|4204396_4205656_-|MinD/ParA-family-protein
MANNVRINVIVVTVPERLDQEWIGRLAAEPQIARVDRVAATTAGFELIRQTRPDLVIVDRDLDQAEQLVRHVFTTLPTTICIAVVARVDTATLRRLVAVGARDVLGRPLQYAELIQSIRALLETEADRRTRVLATLDSNRPQVRGKLVVVISPKGGSGTTMIAANLAVGLRQVSAGRVLLADCCLQFGDAGVHLNLWSRHTLVDLIDHLDDIDDAMIGSVVQQHTSGTHVLLAPNTPDAAGDIGGGQIGRLIDALLDRYEYVVADTWSFLDDVTATLVGKADETLVVTTPEVPSLKNVKRFLEFIQREGLTRGKITLVINRFPSVDGIALDDVKQHLRYPISANIPSEGRLVTHSVNRGIPIVLSHPESWIGQSLLKLAAHVAGEQVATLTLAPSRSRSKGLAALIERRGLFGFARRET
>NC_009523.1|WP_011958058.1|4205693_4206476_-|Flp-pilus-assembly-protein-CpaB
MTRRSGWILLTLGVLLAIGAGALVYVVLQQQSVAAAEQARREVLAQQAPQVPTIKLPVAARSLTPGNAIGPDDILLKDFPVDLVPVNALTETTQIESRVLARAVGQGDPFQRSMFVGERGESVSQEIPPGYVLFAFPIVDLLGQSNLIEDGDRIDLYLTLNTPLDASAAPAPDQATAPTTALTLQNVQVLKVLRQAPREGETKTPATALLCAMRPEDAIILKHIKDTGGTIDFALRSPLDTEPFTTEPLNLPELIQRYMR
>NC_009523.1|WP_011958059.1|4207009_4207378_-|response-regulator
MDEQPTILVIDDDPAMQTVLEIALREAGYRVEVASDGQEGVAKLVSLRPNLVICDIMMPQMDGVEAFQRMKDQLQEDGIPIFIITALNRKPWFADLEAEGAVIIQKPFDIEQVLGLIQTMLN
>NC_009523.1|WP_011958060.1|4207568_4208774_+|two-component-sensor-histidine-kinase
MIVSICDDTPETIACQGVLDAINAQIAVLDRHGVIVAANRAWLRSVAAKSDDHLFRIGTNYRDAWNDDRSIFARVAREAPEGIAAVLRGECACFTYEYRRETDDGERWFRLEATALKQGGAVLTNTDITAHQVQALLTRLREQNQRLQSRMRRRQRLTRAPRQSLRLLIEQTTRLARANAELQQFTSVVSHELREPLRMVTGFLDLLQRRYGDQLDEHAREYVSFAYDGAARMQSLIEKLLAYARLDQHRPDIRPVDCNDVLARAIGMLQIAIDEHQAEITFDPLPTVAGDDVELGLVFRNLLSNAIKFHGDERPRIHIGAQRQKNEWLFTVRDHGIGIAAEDTRRIFDMFVRTHSRSRFPGNGIGLAICRKVITRHGGRIWVERPADGGSLFCFTLPALS
>NC_009523.1|WP_157041132.1|4208785_4209661_+|response-regulator
MSIVGVGDMRTGTDTPLEVLLVEDNPGDARLAAEAFASARIGTFTLTRAERLTEALELLQQRSFDAIVLDLSLPDSSGLDTLQRVLHHAPDIPVVVLTMLSDELLGVQAVNAGAQDYLQKDGCVHESLARSVRYAVERQRLLRELQHARQQEQLARNAHEIAAVEQLSHDTRTSVTAQLYSALPLRDAQPDLFSELVAQYGHILDQRLEQRAYKIETNTSDTLREIANQLGFLRAGPRDVVDVHTHAIRQRVRGASVMRMQAYVEEGRLLVLELMGYLVSYYRAYALGGIH
>NC_009523.1|WP_011958062.1|4209895_4210201_+|circadian-clock-protein-KaiB
MTSKFVLKLYVTGQTPRTERAIQNLRRICEQNLGSQYQLFVIDVLEQPHLAEQERILATPTLIKELPPPVRRIIGDLSDTLKVLQGLDLPVHPSSTGGTQE

Crispr_ID: NC_009523_79

• CRISPR_ID: NC_009523_79
• CRISPR_location: 4336397-4336490
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_79

Consensus_repeat	Method
TTATGGTCTTTGAGTACATAATCCGC	CRISPRCasFinder

spacers of NC_009523_79

>79.1|4336423|42|NC_009523|CRISPRCasFinder
TCTAGCCCGCGCAGGCGGGCTTCGCCCTGCATAGCCGAGGGC

CRISPR arrays and Neighbor proteins around NC_009523_79

CRISPR arrays

The CRISPR arrays of NC_009523_79

>merge|NC_009523|79|4336397-4336490|CRISPRCasFinder
TTATGGTCTTTGAGTACATAATCCGCTCTAGCCCGCGCAGGCGGGCTTCGCCCTGCATAGCCGAGGGCTTATGGTCTTTGAGTACATAATCCGC

>NC_009523|79|75|4336397-4336490|CRISPRCasFinder
TTATGGTCTTTGAGTACATAATCCGC	TCTAGCCCGCGCAGGCGGGCTTCGCCCTGCATAGCCGAGGGC
TTATGGTCTTTGAGTACATAATCCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041334037.1|4329778_4331503_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213192
NC_009523.1|WP_011958161.1|4341796_4342411_-|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl|CDD|366423
NC_009523.1|WP_011958165.1|4344886_4345378_+|8-oxo-dGTP-diphosphatase	unknown	unknown	gnl|CDD|239519
NC_009523.1|WP_041334040.1|4334257_4335364_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009523.1|WP_011958156.1|4336844_4337486_-|haloacid-dehalogenase	unknown	unknown	gnl|CDD|225198
NC_009523.1|WP_011958151.1|4331949_4332735_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl|CDD|223692
NC_009523.1|WP_157041144.1|4344361_4344850_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240036
NC_009523.1|WP_011958157.1|4337634_4337931_-|nucleotidyltransferase	unknown	unknown	gnl|CDD|224583
NC_009523.1|WP_157041143.1|4343934_4344075_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958160.1|4339965_4341804_-|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|234715
NC_009523.1|WP_011958149.1|4328623_4329697_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009523.1|WP_041334034.1|4327752_4328001_-|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236
NC_009523.1|WP_011958153.1|4333588_4334242_+|hypothetical-protein	unknown	unknown	gnl|CDD|226349
NC_009523.1|WP_011958158.1|4338038_4338797_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	unknown	unknown	gnl|CDD|129290
NC_009523.1|WP_011958162.1|4342442_4343522_-|heat-inducible-transcription-repressor-HrcA	unknown	unknown	gnl|CDD|273017
NC_009523.1|WP_011958152.1|4332746_4333343_-|ECF-transporter-S-component	unknown	unknown	gnl|CDD|275311
NC_009523.1|WP_011958155.1|4335373_4336354_+|carbohydrate-kinase	unknown	unknown	gnl|CDD|238572
NC_009523.1|WP_011958148.1|4328304_4328517_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958147.1|4327987_4328284_-|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|224583
NC_009523.1|WP_011958159.1|4338814_4339927_-|molecular-chaperone-DnaJ	unknown	unknown	gnl|CDD|274090

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_041334037.1|4329778_4331503_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	2.09964e-82
NC_009523.1|WP_011958161.1|4341796_4342411_-|nucleotide-exchange-factor-GrpE	gnl|CDD|366423	pfam01025, GrpE, GrpE.	4.98346e-55
NC_009523.1|WP_011958165.1|4344886_4345378_+|8-oxo-dGTP-diphosphatase	gnl|CDD|239519	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily. MTH1, the mammalian counterpart of MutT, hydrolyzes oxidized purine nucleoside triphosphates, such as 8-oxo-dGTP and 2-hydroxy-ATP, to monophosphates, thereby preventing the incorporation of such oxygen radicals during replication. This is an important step in the repair mechanism in genomic and mitochondrial DNA. Like other members of the Nudix family, it requires a divalent cation, such as Mg2+ or Mn2+, for activity, and contain the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as a metal binding and catalytic site. MTH1 is predominantly localized in the cytoplasm and mitochondria. Structurally, this enzyme adopts a similar fold to MutT despite low sequence similarity outside the conserved nudix motif. The most distinctive structural difference between MutT and MTH1 is the presence of a beta-hairpin, which is absent in MutT. This results in a much deeper and narrower substrate binding pocket. Mechanistically, MTH1 contains dual specificity for nucleotides that contain 2-OH-adenine bases and those that contain 8-oxo-guanine bases.	2.3433e-42
NC_009523.1|WP_041334040.1|4334257_4335364_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.10554e-70
NC_009523.1|WP_011958157.1|4337634_4337931_-|nucleotidyltransferase	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	9.96733e-30
NC_009523.1|WP_011958151.1|4331949_4332735_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl|CDD|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	2.06049e-21
NC_009523.1|WP_011958156.1|4336844_4337486_-|haloacid-dehalogenase	gnl|CDD|225198	COG2316, COG2316, Predicted hydrolase (HD superfamily) [General function prediction only].	1.28223e-48
NC_009523.1|WP_011958160.1|4339965_4341804_-|molecular-chaperone-DnaK	gnl|CDD|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_009523.1|WP_011958149.1|4328623_4329697_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.89018e-19
NC_009523.1|WP_041334034.1|4327752_4328001_-|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	1.71742e-14
NC_009523.1|WP_011958153.1|4333588_4334242_+|hypothetical-protein	gnl|CDD|226349	COG3828, COG3828, Uncharacterized protein conserved in bacteria [Function unknown].	1.43354e-93
NC_009523.1|WP_011958158.1|4338038_4338797_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	gnl|CDD|129290	TIGR00186, Uncharacterized_tRNA/rRNA_methyltransferase_MG252, rRNA methylase, putative, group 3. this is part of the trmH (spoU) family of rRNA methylases [Protein synthesis, tRNA and rRNA base modification].	9.47703e-76
NC_009523.1|WP_011958162.1|4342442_4343522_-|heat-inducible-transcription-repressor-HrcA	gnl|CDD|273017	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA. HrcA represses the class I heat shock operons groE and dnaK; overproduction prevents induction of these operons by heat shock while deletion allows constitutive expression even at low temperatures. In Bacillus subtilis, hrcA is the first gene of the dnaK operon and so is itself a heat shock gene. [Regulatory functions, DNA interactions].	3.35066e-120
NC_009523.1|WP_011958152.1|4332746_4333343_-|ECF-transporter-S-component	gnl|CDD|275311	TIGR04518, conserved_hypothetical_protein, ECF transporter S component, folate family. Members of this model are the multiple membrane-spanning S (specificity) component of ECF (energy coupling factor) type uptake transporters. All seed members were found in the vicinity of the bifunctional enzyme folC, involved in making active cofactor from imported folate. However, some species have multiple members of this family, suggesting some diversity of function. [Transport and binding proteins, Unknown substrate].	0.00510515
NC_009523.1|WP_011958155.1|4335373_4336354_+|carbohydrate-kinase	gnl|CDD|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	2.38441e-99
NC_009523.1|WP_157041144.1|4344361_4344850_+|NUDIX-domain-containing-protein	gnl|CDD|240036	cd04680, Nudix_Hydrolase_21, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.69888e-33
NC_009523.1|WP_011958147.1|4327987_4328284_-|nucleotidyltransferase-family-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	3.58273e-20
NC_009523.1|WP_011958159.1|4338814_4339927_-|molecular-chaperone-DnaJ	gnl|CDD|274090	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.	0

Protein sequences

>NC_009523.1|WP_011958155.1|4335373_4336354_+|carbohydrate-kinase
MIDVVSMGELLVEFVATVPNTPLADVPGFIKAPGGAPANVAVGLQRLGLRARFVGKVGDDPFGVYLRDSLAREGVDTRFLLVDRTARTTAVFVAVWDDGRKDLCFYRNPGADMLLSPDEIDARLFDGARCFHFGSIGFIDEPCASAQRRALDIARARGLMITFDPNYRPTLWRDASIAQNVIQDSFQYCHLAKISEEEWEIATGTRDLDAGIAAVLARGVELLVITRGPRGAIATNGDYRIELEPPTVPVVETTGAGDGFMAAMITRLLPERERLGSLTRVDRNIVREALTFANAVGALTCTRPGAIPALPTRVEVEQFMARQGNR
>NC_009523.1|WP_041334040.1|4334257_4335364_+|Gfo/Idh/MocA-family-oxidoreductase
MITPVHVGIIGCGNISGIYLENSKIFDAIDVVAVADIDPDRARDRATQYGIPKACSVEELLADPDIDLVVNLTTPDAHGPVALAVLNAGKHVYNEKPLAVTRDEARALLDLAAQKGLRVGCAPDTFLGGGLQTCRKLIDDGWIGEPIGATAFMMSHGPESWHPNPTFFYQPGGGPMFDMGPYYLTALCVLLGPVQRVTGSARISFTERTITNEYNYGDKIQVNTPTHVAGTLDFASGAIATIITSFDVWASQLPRIEIYGSHGTLSVPDPNTFDGPVWLRRAGAREWSSIPLSHGFTRNSRGIGVADMATAIRLGRPHRASGELAYHVLDIMHAIHDASREGRHITLRSTMTRPAPLPTGLGERSVDP
>NC_009523.1|WP_011958153.1|4333588_4334242_+|hypothetical-protein
MKSALFVWGGWEGHEPKQCVDIFAPLLRAEGYEITISDTLDSYLDRERMHSYSLIVQVYTMATITREQEQGLLEAIASGVGFAGWHGGMADAFRQSTDYQFMVGGQWVAHPGNIIDYTVNITNHDHPITAGLNDFRMHSEQYYMHVDPGNHVLATTTFSGEYCPWIEGVVMPVVWTKMWGKGRVSYCSLGHVARDFDVPEARELVRRGMLWASRVEG
>NC_009523.1|WP_011958152.1|4332746_4333343_-|ECF-transporter-S-component
MATSTTSQRGGLSSTALALIPIAIAINVALGQLVQSILKLPIYLDSIGTVLVGVLLGPLAGAITGLLANIIWGLTLAPSALPFAAVAAVIGLIAGYAGQYGAAQSWWKMALFGVLTGIVAAAISAPIATYVFGGVTGGGTDVLVAMFQNLGASVLGASFAQGAVSDPLDKTITYLVVWAIISALPRRLLARFGNIQQR
>NC_009523.1|WP_011958151.1|4331949_4332735_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MHRTGLFIDRAGFLQRRNPLTKGTGVVLLVGATFLLPAPLTGIALLIGTLLPLAFASAVGWRFLEILLKTLLPVLISLVLVQGLFFPSPDPTTVAVGPLLFRRAGLEFALNTGSRLLIVAGAPLLLFQTTHPGMLVQALTQSGMPRSVGYILLVALQLIPAISERAVGVAEAQRARGLETEGSVLQRIRGVVPLVSPLIVGALIEAEERAMAIESRAFNAPGPKTWIRDIPDPPVERIARMVLLGMLAALVVWRVVAAIAG
>NC_009523.1|WP_041334037.1|4329778_4331503_-|ATP-binding-cassette-domain-containing-protein
MSDCSATNSIIMLRDATFTYAGASRPALRAVTLAVPAGQICAIIGKAGAGKSTLCALCAGFVPHFFRGRLSGDVIVDGVSVADHPIAELVRHVALVGSNAFSQISGARFTVYDEVAFGLENLGVPRPEMIERVEWALRALGIEQLRDRSPYALSGGQQQRMVIAAALAMRPPVLALDEPTMQLDPPAMMELSAVLRSLAQQGITILVAEHRLEWVADVADRVVALDQGTIIADGAPTDVLTDPRLCETGIGWPRPTRIADRARAEGRWLSERPLPITMADLAEGLRMAEDENRLTNEPDRATHASMIRTNDSARNLALPPRVPDAEPIVTLDEVHFTYPNGVEALRGVSLTLQRGERIALVGRNGAGKSTLVRHLNGLLRPSHGRALVGGVDTRTTTVARCARHVGIVFQDVRNQLFARTVREEVRFGPRNLGFTPDRIDALTERAVDALELRDVIDEHPYDLPPARRRLVAIAAVLAMDTPLLVLDEPTAGLDNAAIALLARLIADLALQQRSVLIVSHDLDFCYETLDRVILLRDGRVALDAHFAGLDHAEAAVLRDDVGLPIEVRLRYVNV
>NC_009523.1|WP_011958149.1|4328623_4329697_-|tetratricopeptide-repeat-protein
MTAPLDPNIPPPPQTGRTLTERIREEPIGLWAQLLTAFRDLSGTFDAFANDANPEVRALGRAARSRRPPQANDYFAIGDLCARLVVQGNTLSQTYAAKTVAAYARAGELASRERSVAYRAIVSFAFWLADVARMLGNYESLETAVLICEQARRLIADAGWVDDERRLQMTEDRLRDQVTHMLEGGHAAVDKRASVEQESRMLCDQGQILLRQGRPQEALERFEAAIAAWDANQSAWLWRAMALTDLGRFDEALASYDRALALEPESAGMWNNKGSLLMELGRLEAALQCFERAIDLAAPVSTVKAVYWLNRGKALYMLGRYAEARDALMHSHDLDPSPESAAGIAACRERLEGSSEA
>NC_009523.1|WP_011958148.1|4328304_4328517_-|hypothetical-protein
MLRDSRVAVVIWRDIAGWGIEDYERDAAFVANHNLTAGAAEIYVNGDSRIPGARSLDGLFKARMFSPVEG
>NC_009523.1|WP_011958147.1|4327987_4328284_-|nucleotidyltransferase-family-protein
MPMEKIEAFCRKWKVQRVWLFGSALRDDFGPESDVDVLVEFAPEARWNLLDLAGAEQELSAIMGRPADLVERQCVERSENWIRRRHILESARMIYVAR
>NC_009523.1|WP_041334034.1|4327752_4328001_-|DUF86-domain-containing-protein
MWRDEATLLDIAQAARRIVSFVRGNEFRSSPPEIAWAKIAGMRNRFIHGYDTIRWDLVWRTATEAVPQLLEQIEPLLPTEEP
>NC_009523.1|WP_011958156.1|4336844_4337486_-|haloacid-dehalogenase
MTYTDRALAILHEWVQGEQLRKHCYAVAASMRHFAHLSGGDPDLWGAIGLLHDMDFERYPQMPPPGEHTTAASEAILSGQVTEPPLQMHPFVGVTYLRLQGWSPEVCRAILSHANYSGVGRETLLEKTLAAVDELSSFVVAVALVRPTKSVFEVDVTAVRKKMKDKAFARAVSRDEIIHNAEALGMPLDEVIGHVIEGLRADAQRLGIAGSSA
>NC_009523.1|WP_011958157.1|4337634_4337931_-|nucleotidyltransferase
MATTLAELVKEKRADILALAAKHGARNVRVFGSVARGDADEQSDIDVLVQMEPGRSLLDLGGLQYDLEQLLGCRVDVVTEQGLKARLREEILSEAVTL
>NC_009523.1|WP_011958158.1|4338038_4338797_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB
MPDLLYGRNAVREALRARRRTFQRLLVSAGAQETGTLGDIVRIAGEVGVPVERIDRRELDRRLRDANHQGVALECSDYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEVVGVHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDERAYEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYHAWRVREQGRTKN
>NC_009523.1|WP_011958159.1|4338814_4339927_-|molecular-chaperone-DnaJ
MAVKRDYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAGPTAAPGFDPFSSADPFSSIFETFFGGTMRGSQRGPQRGADLRYTLSISFEEAVFGVEKTIEFRRLETCPACRGSGAEPGTEPVRCPKCGGLGEIRQRAPLFNMVTVTTCDMCRGEGTVIAIPCRECRGEGRVRQTRKITVRVPPGVDNSSQIRISGEGDAGPRGGPYGNLYVVIDVQPHPYFIREGNDIILELPLNVAQAALGVEVEVPTIDGTEHLRIPPGVQSGAVFRIRGKGVPFLRSSGRGDQIVVVRVVIPTNLTDHQRRLFEELARSLEKEPIGGQRDEGFFGRIKNALGL
>NC_009523.1|WP_011958160.1|4339965_4341804_-|molecular-chaperone-DnaK
MGKIIGIDLGTTNSVVAVMEGGEPVVIANAEGSRLTPSVVAINKAGERLVGQVARRQAVVNPEHTIFSVKRFIGRKLSDPAVQKSRSLMPYRLVEAPNGDAWVHLAGRDYSPQEISAFVLQKLKADAEAYLGEPVTQAVITVPAYFNDSQRQATRDAGRIAGLDVVRIINEPTASALAYGLDQNRHNHLIAVYDLGGGTFDISILELGDGVFEVRATNGDTHLGGDDFDQRIMDWMATEFKKETGIDLRTDRTALQRLKEAAEKAKQELSTVLQTDISLPFITADASGPRHLNLTLTRARLEQLTGDLIERTIGPMRQALVDAGVRPNDIDAVVLVGGQTRMPAVQEMVRRFFNREPHRGVNPDEVVAIGAAIQAGVLAGEVGNVVLLDVTPLTLGIETLGGVMTPLIERNTTIPTRKSQVFSTASDNQSSVEIHVLQGERAEARANKSLGRFVLDGIPPAPRGVPQIEVTFDIDANGLLSVSATDKRTGVAQHITITASSGLSEDEIQRMIAEADQYAEEDRQRRDLIAARNAADSVVYNAERALREAGETADETVRVRIQERIAAVRLAIEGDDRNEIRNRTAELTVALQQLAQMTAARSDQDEEAGRAH
>NC_009523.1|WP_011958161.1|4341796_4342411_-|nucleotide-exchange-factor-GrpE
MSEQLQPRPHEEQPETTTDGQEATTPAAPVEEGAAPLSVEALQARIAELERENAELRDNWLRAVADYKNFKRRTDQERAELIRSASAALLLKLLPVMDDLERAMASVTPEVAETPWYGGFKLIPQKLQAILESEGVSRMQTVGEPFDPNRHEAIIYEPSEDGEDGRVIAELQHGYLLRDRVLRPAMVKVSQGKKQSSDSETPHG
>NC_009523.1|WP_011958162.1|4342442_4343522_-|heat-inducible-transcription-repressor-HrcA
MTTDLTDRRRLILKLAIQEFIESSQPVASDLLVRKYRLNVSPATVRNELAALEELGYLTHLHTSAGRVPTDAGYRYFVENLMDRTPLSATEQRTIRHQFYQVRSELDQWIQLAGAVLARTAQNASVVTPPRAQQARLKHLELIAIHETTALMVLVLHDGTIRQQTLTLDVAMTQEELSRCAAQINERCCDAPVERIEEVLKQERAQEPPGGNALVCQVLDLVVKAMHQFNEHISSDIHSDGLIEILNQPEFSRVERVRRMVEILQSGRALGTLIPRALSSSGVQVVIGGEHSYDEMREYSVVLSRYGGGEIVGVLGVIGPTRMAYPRAISAVRYISAVMSDLLAELYGIEGANRLNSEP
>NC_009523.1|WP_157041143.1|4343934_4344075_+|hypothetical-protein
MESLIIILVAAIAVYIVFKIVVGILRFIISLAIIGVAVFLLVQFLS
>NC_009523.1|WP_157041144.1|4344361_4344850_+|NUDIX-domain-containing-protein
MQQRLANAALTLLYRIAHAARDLLWSVARPSLLGVRALVLRDNEVLLVRHRGGATPWGLPGGAVDPHERLEEAARREVYEESGVPAEFQRVLGVYDAFRFTFVNYIIVFVFKAQGNPTAPRSIEIADARFFPLDALPEGIDPGSRRRIEEYRSGAAGISALW
>NC_009523.1|WP_011958165.1|4344886_4345378_+|8-oxo-dGTP-diphosphatase
MPAYTPILATLGYVMSPDGASVLMVHRNARPDDVHYGKYNGLGGKLHSHEDVVSGMKREIREEAGIEADDLVLRGVLNWPGFGKNEEDWFAFVFRIDRWSGTPFTSNPEGDLEWVPVARLHELNLWDNDRLWIDMVFARDHRTFFGVAPYKNGKMVSWSYVLL

Crispr_ID: NC_009523_80

• CRISPR_ID: NC_009523_80
• CRISPR_location: 4347572-4347653
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_80

Consensus_repeat	Method
GCGATGCGCCAACACGACCGGTGGCAGC	CRISPRCasFinder

spacers of NC_009523_80

>80.1|4347600|26|NC_009523|CRISPRCasFinder
GCCGACCGGCGCCTCCCGGCAGGCAG

CRISPR arrays and Neighbor proteins around NC_009523_80

CRISPR arrays

The CRISPR arrays of NC_009523_80

>merge|NC_009523|80|4347572-4347653|CRISPRCasFinder
GCGATGCGCCAACACGACCGGTGGCAGCGCCGACCGGCGCCTCCCGGCAGGCAGGCGATGCGCCAACACGACCGGTAGCAGC

>NC_009523|80|76|4347572-4347653|CRISPRCasFinder
GCGATGCGCCAACACGACCGGTGGCAGC	GCCGACCGGCGCCTCCCGGCAGGCAG
GCGATGCGCCAACACGACCGGTAGCAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958170.1|4350686_4350929_+|hypothetical-protein	unknown	unknown	gnl|CDD|283747
NC_009523.1|WP_011958174.1|4355652_4356054_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958172.1|4352697_4353981_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_011958158.1|4338038_4338797_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	unknown	unknown	gnl|CDD|129290
NC_009523.1|WP_011958157.1|4337634_4337931_-|nucleotidyltransferase	unknown	unknown	gnl|CDD|224583
NC_009523.1|WP_011958176.1|4358457_4359600_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011958160.1|4339965_4341804_-|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|234715
NC_009523.1|WP_011958165.1|4344886_4345378_+|8-oxo-dGTP-diphosphatase	unknown	unknown	gnl|CDD|239519
NC_009523.1|WP_011958173.1|4354315_4355584_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011958166.1|4345390_4346665_+|serine--tRNA-ligase	unknown	unknown	gnl|CDD|235461
NC_009523.1|WP_011958159.1|4338814_4339927_-|molecular-chaperone-DnaJ	unknown	unknown	gnl|CDD|274090
NC_009523.1|WP_011958175.1|4356469_4358149_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224154
NC_009523.1|WP_011958162.1|4342442_4343522_-|heat-inducible-transcription-repressor-HrcA	unknown	unknown	gnl|CDD|273017
NC_009523.1|WP_157041143.1|4343934_4344075_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958161.1|4341796_4342411_-|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl|CDD|366423
NC_009523.1|WP_011958169.1|4349452_4350427_-|ACP-S-malonyltransferase	unknown	unknown	gnl|CDD|223408
NC_009523.1|WP_157041144.1|4344361_4344850_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240036
NC_009523.1|WP_011958171.1|4350925_4352098_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_011958168.1|4348118_4349366_-|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl|CDD|274452
NC_009523.1|WP_157040979.1|4352290_4352428_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958170.1|4350686_4350929_+|hypothetical-protein	gnl|CDD|283747	pfam06153, CdAMP_rec, Cyclic-di-AMP receptor. CdAMP is a family of bacterial cyclic-di-AMP receptor proteins. Cyclic-di-AMP (c-di-AMP) is a bacterial secondary messenger involved in various processes, including sensing of DNA-integrity, cell wall metabolism and potassium transport. CdAMP_rec has a ferredoxin-like fold and is structurally related to Pii-signal transduction proteins.	8.22453e-21
NC_009523.1|WP_011958176.1|4358457_4359600_+|STAS-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	8.64929e-38
NC_009523.1|WP_011958172.1|4352697_4353981_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.34677e-47
NC_009523.1|WP_011958169.1|4349452_4350427_-|ACP-S-malonyltransferase	gnl|CDD|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.33999e-117
NC_009523.1|WP_011958157.1|4337634_4337931_-|nucleotidyltransferase	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	9.96733e-30
NC_009523.1|WP_011958160.1|4339965_4341804_-|molecular-chaperone-DnaK	gnl|CDD|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_009523.1|WP_011958165.1|4344886_4345378_+|8-oxo-dGTP-diphosphatase	gnl|CDD|239519	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily. MTH1, the mammalian counterpart of MutT, hydrolyzes oxidized purine nucleoside triphosphates, such as 8-oxo-dGTP and 2-hydroxy-ATP, to monophosphates, thereby preventing the incorporation of such oxygen radicals during replication. This is an important step in the repair mechanism in genomic and mitochondrial DNA. Like other members of the Nudix family, it requires a divalent cation, such as Mg2+ or Mn2+, for activity, and contain the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as a metal binding and catalytic site. MTH1 is predominantly localized in the cytoplasm and mitochondria. Structurally, this enzyme adopts a similar fold to MutT despite low sequence similarity outside the conserved nudix motif. The most distinctive structural difference between MutT and MTH1 is the presence of a beta-hairpin, which is absent in MutT. This results in a much deeper and narrower substrate binding pocket. Mechanistically, MTH1 contains dual specificity for nucleotides that contain 2-OH-adenine bases and those that contain 8-oxo-guanine bases.	2.3433e-42
NC_009523.1|WP_011958173.1|4354315_4355584_+|HAMP-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	1.16703e-34
NC_009523.1|WP_011958166.1|4345390_4346665_+|serine--tRNA-ligase	gnl|CDD|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NC_009523.1|WP_011958159.1|4338814_4339927_-|molecular-chaperone-DnaJ	gnl|CDD|274090	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.	0
NC_009523.1|WP_011958175.1|4356469_4358149_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	2.19693e-112
NC_009523.1|WP_011958158.1|4338038_4338797_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	gnl|CDD|129290	TIGR00186, Uncharacterized_tRNA/rRNA_methyltransferase_MG252, rRNA methylase, putative, group 3. this is part of the trmH (spoU) family of rRNA methylases [Protein synthesis, tRNA and rRNA base modification].	9.47703e-76
NC_009523.1|WP_011958162.1|4342442_4343522_-|heat-inducible-transcription-repressor-HrcA	gnl|CDD|273017	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA. HrcA represses the class I heat shock operons groE and dnaK; overproduction prevents induction of these operons by heat shock while deletion allows constitutive expression even at low temperatures. In Bacillus subtilis, hrcA is the first gene of the dnaK operon and so is itself a heat shock gene. [Regulatory functions, DNA interactions].	3.35066e-120
NC_009523.1|WP_011958161.1|4341796_4342411_-|nucleotide-exchange-factor-GrpE	gnl|CDD|366423	pfam01025, GrpE, GrpE.	4.98346e-55
NC_009523.1|WP_157041144.1|4344361_4344850_+|NUDIX-domain-containing-protein	gnl|CDD|240036	cd04680, Nudix_Hydrolase_21, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.69888e-33
NC_009523.1|WP_011958171.1|4350925_4352098_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.1463e-47
NC_009523.1|WP_011958168.1|4348118_4349366_-|beta-ketoacyl-ACP-synthase-II	gnl|CDD|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0

Protein sequences

>NC_009523.1|WP_011958166.1|4345390_4346665_+|serine--tRNA-ligase
MLDIRLIREQPDLVKASLGRTGVDPAQVDAVLAYDEQRRALLREVEQLKALRNAVSKEIGKMSDAAARDAKIAEMRAVGDRIAELDRELAAVEEQQYAALMELRNLPHPSVPDGPDETYNVVIAQEGEPRTFDFTPKPHWELGEALDIIDFERGVKLSGSRFYVLKGPGARLQRALIQWMLDLHGKQGYDEVYTPFVVKEQCMWGARQLPKFRDNLYRDVEDDLWLVPTAEVPVTNLHRDEILDADQLPLRYCAYTPCFRREKMSAGRDVRGIKRGHQFDKVEMYMFVRPETSYDELEKLRADAEETCRLLGLPFRTKELCTGDLGFAATRTYDIEVWAPGQGEWLEVSSCSNVEAFQARAANIRYRPEPGARPEYVHTLNGSGLGLPRTLIAILENYQQADGSVVIPEVLRPYMGGIEVIRRT
>NC_009523.1|WP_011958165.1|4344886_4345378_+|8-oxo-dGTP-diphosphatase
MPAYTPILATLGYVMSPDGASVLMVHRNARPDDVHYGKYNGLGGKLHSHEDVVSGMKREIREEAGIEADDLVLRGVLNWPGFGKNEEDWFAFVFRIDRWSGTPFTSNPEGDLEWVPVARLHELNLWDNDRLWIDMVFARDHRTFFGVAPYKNGKMVSWSYVLL
>NC_009523.1|WP_157041144.1|4344361_4344850_+|NUDIX-domain-containing-protein
MQQRLANAALTLLYRIAHAARDLLWSVARPSLLGVRALVLRDNEVLLVRHRGGATPWGLPGGAVDPHERLEEAARREVYEESGVPAEFQRVLGVYDAFRFTFVNYIIVFVFKAQGNPTAPRSIEIADARFFPLDALPEGIDPGSRRRIEEYRSGAAGISALW
>NC_009523.1|WP_157041143.1|4343934_4344075_+|hypothetical-protein
MESLIIILVAAIAVYIVFKIVVGILRFIISLAIIGVAVFLLVQFLS
>NC_009523.1|WP_011958162.1|4342442_4343522_-|heat-inducible-transcription-repressor-HrcA
MTTDLTDRRRLILKLAIQEFIESSQPVASDLLVRKYRLNVSPATVRNELAALEELGYLTHLHTSAGRVPTDAGYRYFVENLMDRTPLSATEQRTIRHQFYQVRSELDQWIQLAGAVLARTAQNASVVTPPRAQQARLKHLELIAIHETTALMVLVLHDGTIRQQTLTLDVAMTQEELSRCAAQINERCCDAPVERIEEVLKQERAQEPPGGNALVCQVLDLVVKAMHQFNEHISSDIHSDGLIEILNQPEFSRVERVRRMVEILQSGRALGTLIPRALSSSGVQVVIGGEHSYDEMREYSVVLSRYGGGEIVGVLGVIGPTRMAYPRAISAVRYISAVMSDLLAELYGIEGANRLNSEP
>NC_009523.1|WP_011958161.1|4341796_4342411_-|nucleotide-exchange-factor-GrpE
MSEQLQPRPHEEQPETTTDGQEATTPAAPVEEGAAPLSVEALQARIAELERENAELRDNWLRAVADYKNFKRRTDQERAELIRSASAALLLKLLPVMDDLERAMASVTPEVAETPWYGGFKLIPQKLQAILESEGVSRMQTVGEPFDPNRHEAIIYEPSEDGEDGRVIAELQHGYLLRDRVLRPAMVKVSQGKKQSSDSETPHG
>NC_009523.1|WP_011958160.1|4339965_4341804_-|molecular-chaperone-DnaK
MGKIIGIDLGTTNSVVAVMEGGEPVVIANAEGSRLTPSVVAINKAGERLVGQVARRQAVVNPEHTIFSVKRFIGRKLSDPAVQKSRSLMPYRLVEAPNGDAWVHLAGRDYSPQEISAFVLQKLKADAEAYLGEPVTQAVITVPAYFNDSQRQATRDAGRIAGLDVVRIINEPTASALAYGLDQNRHNHLIAVYDLGGGTFDISILELGDGVFEVRATNGDTHLGGDDFDQRIMDWMATEFKKETGIDLRTDRTALQRLKEAAEKAKQELSTVLQTDISLPFITADASGPRHLNLTLTRARLEQLTGDLIERTIGPMRQALVDAGVRPNDIDAVVLVGGQTRMPAVQEMVRRFFNREPHRGVNPDEVVAIGAAIQAGVLAGEVGNVVLLDVTPLTLGIETLGGVMTPLIERNTTIPTRKSQVFSTASDNQSSVEIHVLQGERAEARANKSLGRFVLDGIPPAPRGVPQIEVTFDIDANGLLSVSATDKRTGVAQHITITASSGLSEDEIQRMIAEADQYAEEDRQRRDLIAARNAADSVVYNAERALREAGETADETVRVRIQERIAAVRLAIEGDDRNEIRNRTAELTVALQQLAQMTAARSDQDEEAGRAH
>NC_009523.1|WP_011958159.1|4338814_4339927_-|molecular-chaperone-DnaJ
MAVKRDYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAGPTAAPGFDPFSSADPFSSIFETFFGGTMRGSQRGPQRGADLRYTLSISFEEAVFGVEKTIEFRRLETCPACRGSGAEPGTEPVRCPKCGGLGEIRQRAPLFNMVTVTTCDMCRGEGTVIAIPCRECRGEGRVRQTRKITVRVPPGVDNSSQIRISGEGDAGPRGGPYGNLYVVIDVQPHPYFIREGNDIILELPLNVAQAALGVEVEVPTIDGTEHLRIPPGVQSGAVFRIRGKGVPFLRSSGRGDQIVVVRVVIPTNLTDHQRRLFEELARSLEKEPIGGQRDEGFFGRIKNALGL
>NC_009523.1|WP_011958158.1|4338038_4338797_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB
MPDLLYGRNAVREALRARRRTFQRLLVSAGAQETGTLGDIVRIAGEVGVPVERIDRRELDRRLRDANHQGVALECSDYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEVVGVHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDERAYEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYHAWRVREQGRTKN
>NC_009523.1|WP_011958157.1|4337634_4337931_-|nucleotidyltransferase
MATTLAELVKEKRADILALAAKHGARNVRVFGSVARGDADEQSDIDVLVQMEPGRSLLDLGGLQYDLEQLLGCRVDVVTEQGLKARLREEILSEAVTL
>NC_009523.1|WP_011958168.1|4348118_4349366_-|beta-ketoacyl-ACP-synthase-II
MSTAQRVVITGLGAVTPCGVSVPSMWEALLAGRSGIGPITRFDASGFAIRIAGEVRGFSLDPAVDPREARRMPLNVRYALNAALEAVHDARLDMTREDPEQVGVVFGSGAGGLDLIFDNHDVLRERGPRRVSPTLIANMIPDAASGYIAIQLGAQGPNMAVVAACSTGGHNVGEAYELIRRGDAAVVIAGGSEAPIHPTIVASFSNMRGLAEDNLNPERACKPFDARRDGFILSEGAGALVLESLEHALARGAPIIAEIVGYGNSCDAGDMIAADDQGRGAARAMAMALRKSGLPPDAVDYINAHGTGTPLNDLAETRAIKSVFGDHAYRLAVSSTKSMLGHMMGAAGAVEALICALVIRDGRLPPTINLEEPDPDCDLDYVPNVARAANVRVALSNSIGLGGHNSALLMRRFEG
>NC_009523.1|WP_011958169.1|4349452_4350427_-|ACP-S-malonyltransferase
MKKRIALVFPGQGSQYVGMGKELYEASPAARRIFEQADQVLGFELSKLCFEGPQEELDDTVNAQPAILTVSIACLEALKERFGPFGYLGAPSLVAGHSLGEFTALVAAGVLDFEDALKLVRERGRLMKESGEQRPGGMAAVVGLDDKTLEEVVQEAQAEGVVSVANANSPGQTVLSGEHRALQRAMELAKARGAKLVQRLQVSIAAHSPLMQSASARFNELLDRFQLRPPEVPLIANISGRALTTVEELRQELSQQLTRPVQWTRSVQEMVSHGVDTIVEVGPRQVLSGLIKRITPHARPVPLTDTEVARLVAQTTSEEEGSGI
>NC_009523.1|WP_011958170.1|4350686_4350929_+|hypothetical-protein
MKLLIFVTDDSVADATVDALVEQGFRVTRLASTGGFLRKGRTTLLVGVEDAAVDHALNLVRGTAPGTLSITLDLERYERL
>NC_009523.1|WP_011958171.1|4350925_4352098_+|glycosyltransferase-family-4-protein
MNILYVASGIPVPGTLGGSVHTLEVARGLAQRGHTVDVVACTRPDVFDVAALLRPISSRYDRFRLHHIDVPKTLALLSAPVIMRLARALKPDIIIERYYNFAGAGILAARRLGVPSILEVNALIVDPPVVLKRRLDDLLGGPMRRWAVAQCRMADRIVTPLHTTVPPDIPRSRIVELPWGADVERFCIDRSQEGTTPALPTVVFLGSFRAWHGVLDAVRAGGLLIEQGRVCHFLLIGDGPQHAAAVRLAARWQGHFTFTGAVPYDDVPSLLARASIAVAPFDTAAHPALRAAGFFWSPLKVFEYMAAALPVVTIDIPPLNQIVRHGSEGLLYPEGDVDALAGAIAYLIDHPDEARAMGERGRARVTAHFSWSRHCEALEWVMEETLKVEG
>NC_009523.1|WP_157040979.1|4352290_4352428_+|hypothetical-protein
MTVSSVGTTNLVRQGVSARRLATEVAAGRREARLRGLEGAHPARP
>NC_009523.1|WP_011958172.1|4352697_4353981_+|glycosyltransferase-family-4-protein
MNILLPTDVFPPRCGGAGWSAHALALALIARGHTVTAIVPREGQEGIRTGDILGVPTVFAGYRAPRIPFVRNYARNERLWPHLAQVIIETSTSPPFHHPATIIHAQHVQVAPSAVIAGRRIGAPVVISVRDHWPWDYFATGLHGDRIPYPRQTWASLATDLPARLGPLPGAVALPAIPYMLAHLAHRRAALRQADAVIAGSRYIAGRLANLVTSERLHIIPNIVDLAMIDAQIAAPSDLIPPDERFVLYVGKLERNKGAHLLGEIVQQAGAALHRHTLVIAGSGPLRADLEVAMRVSRVRARFLDWIDHNDVLRLMARCDLLLFPSAWGEPLSRVLLEACACGAPILAMPTGGTPDIIVDGESGALAATVSNFARRLAELLERPAERRALGAGARRRAEQRFAPDVVAGQVERLYQSLRESARRAAP
>NC_009523.1|WP_011958173.1|4354315_4355584_+|HAMP-domain-containing-protein
MIRSSLTGKVTLAAMIIVALIIGAVAGTSWVVNGIRHSIEHLADHTIKRMTHADAASNYLSRAFAEAYAAGASGSRAKIAVARLYLAAARNELSRLSDPETHDIADEILVEQEIIVQHYIRLAYEAETTLLSLENAIIENDQEAISGYNAAMIALVIQSGQLADAMSSLGLKEFRETEEMLRSEIRTAHLVLSSASVVLVLTAVMALFLLRRHIVHPIEQLAEAAHTMSERRSVAPLRITSRDEIGRLQRAFNEMTEALAQQTRRLEEQITISEAARAEAETARMHLQEQLATIEEQREVIRSMSVPLLPLTHTSAVVPLIGAIDSARLAILSNRVLQSVADRRFRYILFDITGVPLVDEEVARGLLSIVRALRLLGAEAVLVGIRPEVAQALAPHGNALAEVTTYSTLEQGMMKVLNGHAR
>NC_009523.1|WP_011958174.1|4355652_4356054_-|hypothetical-protein
MQSANLDQTRAQIGHHLQFLGYEVSTDGKMVLARHSTKPNIAVQAFTEGVLFTSIYSCEEIAALDRIGFLEFINQANRTATISRYYADAQNNFFLEAWYAGDYRQVDFARFVSLWEMDFERLKQVPGISMYLK
>NC_009523.1|WP_011958175.1|4356469_4358149_-|NAD(P)/FAD-dependent-oxidoreductase
MPQKYDYDAIIVGGGHNGLTCAGYLQRAGLRTLVLERRPIVGGAVCTEEVIPGYKIDVGSSAHIMIHLTPVIRDLELERYGLEYCDMDPFAFYPVPDGSGAIALYRDVDKTCESIASVSPRDAEAYRRFLAFWRPINEAVFETFLNPPTVTGLFGSMIKAQLRTGKWDGTLETVRRLFTSYGQLIIEQFESEPMRAFMAWLGAQSGPPPDEIGSGDHFGWYAMMHLSGAKHPKGGSGMLTQAMARSLIAAGGEVRLDAPVKRILVQNNRVQGVELQSGERISAPLVVSNAHVITTLLDLVGADHLPPGLAERVRNIRIGNGFGMTVRCAAEALPDYPGAPSGGKPHWSHHGLQMLCPSLQYLRNAFADYQRGLPSREPAVISMTFSAIDPTVAPEGKHTVFLWSQYFPYELADGRHWDDIREEVADSILEVLYRHAPNMRGKIIDRFIQSPLDLERRLGLLRGNVMHVEMSFDQMFFFRPLPELAKYRTPIRGLYLTGASTHPGGGVFAASGYNTAHVVLGDMRRQRMVWAGAALAAGSVGWLAARRRSSAERGLASER
>NC_009523.1|WP_011958176.1|4358457_4359600_+|STAS-domain-containing-protein
MDARPARWLERLPYDSPLAYRQALVLQYLALFIAGGAVVGIGLAPFANQTLEGLISALAIYTVALLGVLSAIWLLRRGSLRAAGITIVLVILAVTGAAMALYGRSHIQFTLPTLAIPVVLAGMLLGRRTLWLTAALAVAIVAVTSLGMVYAPQWFGTLRVPEAHPLVFTAGFALVIVILTLILDRFSGLLRQALEQAHAREAELEALRASLERTVAERTAVLQQKVDELRTAHDTVRMLSVPALPVLPGVLVLPLIGAFDSRRIADLRHTALNAVEQRRAKSVIFDVTGIPSMDTHTAQALLQTAAAVRLLGAQPWLVGLRAEVAQTIVELGIDLRAFRISASLESAISTLAGHTDARQPTPRPHAPEPPLDGNGARQSN

Crispr_ID: NC_009523_81

• CRISPR_ID: NC_009523_81
• CRISPR_location: 4371336-4371425
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_81

Consensus_repeat	Method
ATGGACTTTGAATAAATAATCCGC	CRISPRCasFinder

spacers of NC_009523_81

>81.1|4371360|42|NC_009523|CRISPRCasFinder
CAGCCCGCGCAGGCGGGCTTCGCCTTGCATAGCCGAGGGCTT

CRISPR arrays and Neighbor proteins around NC_009523_81

CRISPR arrays

The CRISPR arrays of NC_009523_81

>merge|NC_009523|81|4371336-4371425|CRISPRCasFinder
ATGGACTTTGAATAAATAATCCGCCAGCCCGCGCAGGCGGGCTTCGCCTTGCATAGCCGAGGGCTTATGGTCTTTGAATAAATAATCCGC

>NC_009523|81|77|4371336-4371425|CRISPRCasFinder
ATGGACTTTGAATAAATAATCCGC	CAGCCCGCGCAGGCGGGCTTCGCCTTGCATAGCCGAGGGCTT
ATGGTCTTTGAATAAATAATCCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958191.1|4377503_4378586_+|hypothetical-protein	unknown	unknown	gnl|CDD|198111
NC_009523.1|WP_011958183.1|4368200_4368728_+|DUF4405-domain-containing-protein	unknown	unknown	gnl|CDD|379580
NC_009523.1|WP_011958192.1|4379064_4379760_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958197.1|4386007_4387234_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|274577
NC_009523.1|WP_011958188.1|4373038_4374325_-|citrate-synthase	unknown	unknown	gnl|CDD|99869
NC_009523.1|WP_041335707.1|4375756_4377154_-|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143465
NC_009523.1|WP_011958196.1|4385159_4386011_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|366133
NC_009523.1|WP_011958195.1|4380499_4385167_+|cell-division-protein-FtsK	unknown	unknown	gnl|CDD|274860
NC_009523.1|WP_041334051.1|4360604_4361432_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_009523.1|WP_011958182.1|4367322_4367934_+|copper-chaperone-PCu(A)C	unknown	unknown	gnl|CDD|377298
NC_009523.1|WP_011958193.1|4379840_4380119_+|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl|CDD|377587
NC_009523.1|WP_011958180.1|4362882_4365630_+|beta-glucosidase	unknown	unknown	gnl|CDD|224389
NC_009523.1|WP_011958189.1|4374721_4375702_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958186.1|4369802_4371218_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|182539
NC_009523.1|WP_011958185.1|4369089_4369800_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_041334053.1|4366742_4367204_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958179.1|4361906_4362716_-|polyisoprenoid-binding-protein	unknown	unknown	gnl|CDD|377274
NC_009523.1|WP_011958194.1|4380161_4380443_+|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl|CDD|274862
NC_009523.1|WP_011958177.1|4359596_4360349_-|glutamine-amidotransferase	unknown	unknown	gnl|CDD|225974
NC_009523.1|WP_011958184.1|4368724_4369093_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958191.1|4377503_4378586_+|hypothetical-protein	gnl|CDD|198111	smart01043, BTAD, Bacterial transcriptional activator domain. Found in the DNRI/REDD/AFSR family of regulators. This region of AFSR along with the C terminal region is capable of independently directing actinorhodin production. This family contains TPR repeats.	7.71099e-20
NC_009523.1|WP_011958183.1|4368200_4368728_+|DUF4405-domain-containing-protein	gnl|CDD|379580	pfam14358, DUF4405, Domain of unknown function (DUF4405). This presumed domain is functionally uncharacterized. This domain family is found in bacteria and archaea, and is approximately 50 amino acids in length. There are two conserved histidines that may be functionally important. This family is N-terminally truncated compared to other members of the clan.	2.91154e-06
NC_009523.1|WP_011958194.1|4380161_4380443_+|WXG100-family-type-VII-secretion-target	gnl|CDD|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	4.18129e-16
NC_009523.1|WP_011958182.1|4367322_4367934_+|copper-chaperone-PCu(A)C	gnl|CDD|377298	pfam04314, PCuAC, Copper chaperone PCu(A)C. PCu(A)C is a periplasmic copper chaperone. Its role may be to capture and transfer copper to two other copper chaperones, PrrC and Cox11, which in turn deliver Cu(I) to cytochrome c oxidase.	5.12154e-43
NC_009523.1|WP_011958188.1|4373038_4374325_-|citrate-synthase	gnl|CDD|99869	cd06116, CaCS_like, Chloroflexus aurantiacus (Ca) citrate synthase (CS)_like. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). This group is similar to gram-negative Escherichia coli (Ec) CS (type II, gltA) and Arabidopsis thaliana (Ath) peroxisomal (Per) CS. However EcCS and AthPerCS are not found in this group. The overall CS reaction is thought to proceed through three partial reactions and involves both closed and open conformational forms of the enzyme: a) the carbanion or equivalent is generated from AcCoA by base abstraction of a proton, b) the nucleophilic attack of this carbanion on OAA to generate citryl-CoA, and c) the hydrolysis of citryl-CoA to produce citrate and CoA. There are two types of CSs: type I CS and type II CSs. Type I CSs are found in eukarya, gram-positive bacteria, archaea, and in some gram-negative bacteria and are homodimers with both subunits participating in the active site. Type II CSs are unique to gram-negative bacteria and are homohexamers of identical subunits (approximated as a trimer of dimers). Some type II CSs are strongly and specifically inhibited by NADH through an allosteric mechanism. C. aurantiacus is a gram-negative thermophilic green gliding bacterium, its CS belonging to this group may be a type I CS; it is not inhibited by NADH or 2-oxoglutarate and is inhibited by ATP. Both gram-positive and gram-negative bacteria are found in this group.	0
NC_009523.1|WP_011958197.1|4386007_4387234_+|VWA-domain-containing-protein	gnl|CDD|274577	TIGR03436, acidobact_VWFA, VWFA-related Acidobacterial domain. Members of this family are bacterial domains that include a region related to the von Willebrand factor type A (VWFA) domain (pfam00092). These domains are restricted to, and have undergone a large paralogous family expansion in, the Acidobacteria, including Solibacter usitatus and Acidobacterium capsulatum ATCC 51196.	1.88448e-10
NC_009523.1|WP_011958196.1|4385159_4386011_+|FHA-domain-containing-protein	gnl|CDD|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	3.2066e-15
NC_009523.1|WP_041334051.1|4360604_4361432_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.28456e-25
NC_009523.1|WP_041335707.1|4375756_4377154_-|aldehyde-dehydrogenase-family-protein	gnl|CDD|143465	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.	0
NC_009523.1|WP_011958193.1|4379840_4380119_+|WXG100-family-type-VII-secretion-target	gnl|CDD|377587	pfam06013, WXG100, Proteins of 100 residues with WXG. ESAT-6 is a small protein appears to be of fundamental importance in virulence and protective immunity in Mycobacterium tuberculosis. homologs have been detected in other Gram-positive bacterial species. It may represent a novel secretion system potentially driven by the pfam01580 domains in the YukA-like proteins.	4.55513e-19
NC_009523.1|WP_011958180.1|4362882_4365630_+|beta-glucosidase	gnl|CDD|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	3.22541e-78
NC_009523.1|WP_011958186.1|4369802_4371218_+|HAMP-domain-containing-protein	gnl|CDD|182539	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS.	3.89273e-66
NC_009523.1|WP_011958185.1|4369089_4369800_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.23522e-88
NC_009523.1|WP_011958179.1|4361906_4362716_-|polyisoprenoid-binding-protein	gnl|CDD|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	5.21471e-27
NC_009523.1|WP_011958195.1|4380499_4385167_+|cell-division-protein-FtsK	gnl|CDD|274860	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain. This model describes the C-terminal domain, or longer subunit, of the Firmicutes type VII secretion protein EssC. This protein (homologous to EccC in Actinobacteria) and the WXG100 target proteins are the only homologous parts of type VII secretion between Firmicutes and Actinobacteria. [Protein fate, Protein and peptide secretion and trafficking].	2.90213e-119
NC_009523.1|WP_011958177.1|4359596_4360349_-|glutamine-amidotransferase	gnl|CDD|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	6.65042e-95

Protein sequences

>NC_009523.1|WP_011958186.1|4369802_4371218_+|HAMP-domain-containing-protein
MRSLTLKLTLAFLLVGLIGSLMVALIVGLRTRSEVDLFLSLRDRTILLNALRSYYETNGGWQGVEQVLERTAPLDFYSRNLVLADTNGVVVYGRRPYRPGRQLAPGMIARAETLRSDGEVIGYFFFVGRPPLPLLSDPRWAAEAALLQRLAMATVLSAIAATIVALVVGIVLARTLTRPIRELTAATRAMARGRFDQRVVVRSRDEIGELAQAFNQMSADLSRAIQARRQMTADLAHDLRTPLSILRGYTEGLQEGRISGSPTIYQIMHGEVEHLQRLIDDLRLLSLADAGALSLNRRPVDPRALLERAALAHMVQAEQQGLTIRVEASETLPSVAVDTDRMAQVLNNLVANALRHTARGEIVLTAREEGAQRVILEVRDTGSGIAPEDLPRIFDRFYRADPSRSREGGHQSAGLGLAIAKAIIEAHNGAISVASRVGEGTTFTITLPVVRDQKSRPAPQETSVTVSTGQR
>NC_009523.1|WP_011958185.1|4369089_4369800_+|response-regulator-transcription-factor
MSTILVVDDEPALRDMLRLYLEQEGFHVVEAGDGRRALYVARVEKPDLVVLDLMMPEMGGYEFLRAFAKESRTPVIVLTAKIEDTDKILGLELGADDYVTKPFNVRELIARIRAVLRRTQQTPLEPDVLRAADIVLDRTGRTVRVGGRYVDLTPSEFAILATLMAAPGQVFSRLDLLDRVSGDAFEGSERTIDVHIRNLRAKIEADPRHPQYIETVYGMGYRFALPRTSNPAATGV
>NC_009523.1|WP_011958184.1|4368724_4369093_+|hypothetical-protein
MNVFWRVLAILAAALVVVGALMAFQRTEFAETLLASPERMRLEAGSDHDGRGPDAFFARGERSGMFPGNAGRHALEHAPDPRGIVEVLKHLIVIGVIVALVEGILPFTRRFLSRRAKAKPAV
>NC_009523.1|WP_011958183.1|4368200_4368728_+|DUF4405-domain-containing-protein
MNVDVSDARRRTVRNLALDSALFVAFLIATAPRFTGIAIHEWLGIAFGAAIVTHLVLHWSWIVGVTRRLFDRTTGSARVNYALNVLLFVLITIVVFTGLMISETALPWFGIDMRPDRVWRQIHHLASDASVFLVGLHIALHWNWIVRTGRRMLAAWFPPSMSAEPASVMQREVQQ
>NC_009523.1|WP_011958182.1|4367322_4367934_+|copper-chaperone-PCu(A)C
MNLYRYCFILAGALALAACTATSPTTPAAPANTGATGGVTIQISDPWARAMKMEGGAMGSMEQPTMAPASGGGYGGMEPTKAPDQGMAHGGHGDMEMGGANSAAYMIIRNTGSEPDKLIAASSDVAKTIELHTVIEEGGVMRMRQVEGGIDIPANGQVELKPGGFHVMLIGLTRDLNAGDSVQLTLTFEKAGQIPVTAQVRQP
>NC_009523.1|WP_041334053.1|4366742_4367204_+|hypothetical-protein
MERVTAQAQSLISARPRSPVRTESAPALIRIFFSAMMALMLGILNPALCVLHCTISEDQTYRQAKPGAVRFVCHLHGAAATQPDAQTGMHDRQTTMPRAFYEGVVTLLVLIVALVLIALLPPHIQLHRYGDAPQPPIPPPKSLHLCPSCALSR
>NC_009523.1|WP_011958180.1|4362882_4365630_+|beta-glucosidase
MTDTGVALTSEREKRIDALLQQMTLAEKVALLAGSSMWTTTPIERLGIPAIKVTDGPNGARGAGGFVGGAVTAACFPVGIALAATWNTTLLEAVGEALAEEAQSKGAHLLLAPTVNIHRSPLNGRNFECYSEDPYLSARMAVAYITGLQRRGVGATVKHYVCNDSEFERNTISSEVDERTLREIYLPPFRAAVQEAGTWAVMAAYNRVNGIYASEHPMLLIDILKREWEFDGIVMSDWFGTKSVVEAAANGLDLEMPGPTRWRGERLLAAVEQGQVSLAAIDESARRMLRTIARAGAFENPDIRPEQAIDRPAHRALIRRAAAEGMVLLKNEGGILPLNLASLSSIAIIGPNAKTAQIMGGGSAQVNAHYAISPYDGIAARVGNRATLGYEIGCTNHRQLPRLDGKLVEAGDGSGRGFTIVYYNSPDLTGDPVHRATVETGEQVWLGEVAPGVDPRQFSARLTARFTPTESGVHTFSLISAGVSRLFVNDTLLVDNWTNPVRGDTYFGAGSTEVTASIALEAGRTCDLRLEYSTQGAAMLAAVRLGYLPPVAEDAIERAAALAARSDVALVFVGLNADWESEGHDRPHMDLVGRQAELIERVANANPRTVVVLQTGSPVTMPWLDKVAGVIQAWYPGQECGNAIADVLFGDVNPSGRLPQTFPVRLEDNPAYINYPGENGRVRYGEGIFVGYRYYEKKKVAPLFPFGFGLSYTTFRYDNLRLSADTLAPDERLTVQVDVTNTGNVAGQEVVQLYVRDSAARVARPEKELKGFAKVALQPGETQTVTLHLDREALAYWDDAQHAWVAEAGEFEVLIGSSSQDIRARATFRLSETVSFGGPAKPPVKLSIDSPVKALLEHEGARHILERYLPGFAEQAGVGVMMGLTLAQMAGFAPDRITPEHLAAIAADLAQLRDQ
>NC_009523.1|WP_011958179.1|4361906_4362716_-|polyisoprenoid-binding-protein
MNRNRIVIIAVAALLVVGAGFWVFNSVLGDTQPASGPMTAIPVAAQPTSVPDPTAEPMPVTPAATDQPTMAPVAPTEAPTAPSAETPPNEVIRYQIVADESTVSFRIAEDLRGQRIEAVGTTNQVAGEIAVNPSDLSTAQIGVIRVNARTFTTDSSNRDRAIRNFILNTDQYEFITFTPTGIEGLSGSGALGQPFTFTIRGDLTIRDITRPVVFEASVRAESAERLVGVATTTVKRSDYNLQIPSVPFVANVSDDVVLTIDFVALAVTQ
>NC_009523.1|WP_041334051.1|4360604_4361432_+|alpha/beta-hydrolase
MTSWQAGDVRVHGLRIHYTRTGGARYPLVLAHGFSDDGLCWTPVARALEAMFDVIMVDARGHGRSDAPEHGYGPLEHASDLAGVITALGLDRPFILGHSMGAITALTLAGIHPDLAGAILLEDPPPWWEASALSAAAADDDRWAGMRTWVFGLKRQTRDELIAAQRAANPAWSDDELGPWADAKHRLSLNVINRSAPTEVDWQTILRRITCPTLLITGDPVRGALVTSENVQTLRQFIPHLQVAHIPDTGHSIRRDQFNRYLAAVRDFLTAHALE
>NC_009523.1|WP_011958177.1|4359596_4360349_-|glutamine-amidotransferase
MTRRLRIAHLYPDHMNIYGDRGNIIALQQRCLWRGIACDVLPVGPGTTVDWSAIDIAFFGGGQDSGQALIAEDFLERQGPALRAAIDDGLVMLAICGGYQLLGQYFLTHTGQRLPGIGALDVHTVGGKERLIGNVVIETEPTLCGAPLRLVGFENHSGRTYLGAGVRPLGRVLVGHGNNGEDRTEGAVYRNTIGCYLHGSLLPKNPQLADHLIAVALQRRYADVSALVPLDDTLELAAQRVMAERMLLRN
>NC_009523.1|WP_011958188.1|4373038_4374325_-|citrate-synthase
MTRNTLTITDNRTGKTYEIPIEHNTIRATDLRQIKTDPDDFGLMSYDPAFMNTAACISRITYIDGDKGILEYRGYPIEQLAEQSSYLEVAYLLLYGELPSKERLEWWEYRISRHLFLHNSLVELIQAFRYDAHPMGILISSVAAMSTLYPEAKNIHDPAVREKQIWRIIGQIPTIAAFAYRHRIGRPFNLPDSSLSYTANLLYMMDYMNQREYEVNPVLAKALDVLFILHADHEQNCSTSVMRSVGSSHADPYNALAAAAAALYGPLHGGANEAVLRMLQQIGHPKNVPAFIERVKKGETRLMGFGHRVYKNYDPRAKIIRKIAHEVFEATSANPLLDVAMELERVALEDEYFVSRKLYPNVDFYSGLIYQALRFPIEYFPFLFAIPRASGWLAQWLEMLDDPEQKITRPRQIYLGHPRRDYVPVDQR
>NC_009523.1|WP_011958189.1|4374721_4375702_+|hypothetical-protein
MVRLTTGIVTLVLLADSIAGFAVQPPDAHFSEPQVRPSQVFRIESVAPPPIRSAPQLIRFPVATVRAIPIPEVTIVADTPPAPEATVPPPFIAGDGPWMRGTRVAQTGRVDVYVGLRTFTPEQVAAIAPRLEELLRGNEERFGFQLNRRVSLAFYRPALAPSKDTRGIAYTEEGRAAVFYRPHEDIERALVVASHELAHHLQAQRYGDDVQKRADIILLEGLATWITGPPWLAKYGVENWKERARQISDSGVPLRLLHARRYGDNIAYELWASFVDFLIERDGMEKLHALYVSGRGREPGSADYRGVYGASLNELAAEWRAWVETD
>NC_009523.1|WP_041335707.1|4375756_4377154_-|aldehyde-dehydrogenase-family-protein
MAGEWRTGAPYTVACPYDGSPVAVVHRAAPADLEQAIQAAVEAFRTTRRSPLHRRAAALRAIAAGIEARAEELARTIALEAGKPIKQARIEVARSIVTFSTAADEATRSNDEALRLDAAPGGEGRQAIVRRFPVGPVAAITPFNFPLNLVAHKVAPAIAAGCSVVLKPASQTPIVALKLAEIIASSGWLPEALSVLPLASRDAAPLVEDERFGLLTFTGSPVVGWEMKRRAGRKRVTLELGGNAGVIIHSDADLAFAAARCVVGGFSYAGQSCISVQRIFVHASVYDAFMELFVPQVQALKVGHPLDEASDLSALINPSEAVRVSAWLNEARSAGAEFVTGGMVEGGVVAPTIVARAAPELRVNCQEIFAPVVTVQPYTTFEEALAAVNNSEFGLQAGVFTRDVGRIFQAYEELEVGGVIINDVPTWRIDPMPYGGVKQSGFGREGLRYAIEEMTERKLLVVNVG
>NC_009523.1|WP_011958191.1|4377503_4378586_+|hypothetical-protein
MPSVEPKYSSDRGVASVRHDEHIVQTCIPLLLHPDEQVQRQATLLLLTLYGTHAFTLLRRRLSDEKPQVRREAEQALRVLGRQSGHPVDFRPFRGMHIECLGTLRVYIGNQEILSHEWAQSNVSRAGRRKVQAVLAYLVHRGRGGASADEIRAAVWGDGGATGALGRTMTALRQTIEHFGGTSMAESLLISSNQRYILTPDAYTTDVRSFEHTIRVAEQTEHDRDLAAAAPVYRHACDLYGGPYLAGVDMLADEIEERRTELLNAYLNALERLAEYAYQQGDDEQCLALCHRGIRFDPTDERLTLWMLRCYARQRNESEIARVFRRYLRALAAPPDQGDAVVRWMRLRSGTHNEAVDITT
>NC_009523.1|WP_011958192.1|4379064_4379760_+|hypothetical-protein
MSIEFDVSWAPSEHKTVSREPDKTIREVVQSLVVQLNLPEYDPQGRRIVYGLYREHDGERELLQDARTLKSARIQAQTVYIANVAAPWWQSNATLPAPKPGPRPPTKPLPRRLASPSSCRLKLAPSCTVVVQGDYLELDRAYLSSTLPQTTILAEKAHIFSGFDSRLMHVSRKNHCAIIRQGDHWLLRAYKPTYVNGKLLNNGQTVTIQPPGAEVVLGNGGWPITIELFEA
>NC_009523.1|WP_011958193.1|4379840_4380119_+|WXG100-family-type-VII-secretion-target
MPPISLDPQQARATASVFDGGKGSIEGELSRMMSSVSEVTSTWSGQSRQQFESRWEEWSQRLRTMMDELQNLANGLRREAEEFESVDRSFNA
>NC_009523.1|WP_011958194.1|4380161_4380443_+|WXG100-family-type-VII-secretion-target
MPMISLDTDAARSASATLAASKSSIEGELGRMMSSANEVMSTWSGTSRQQFESQWEQWCQKLRTMMEELQSLSNGLRREAEEFEAVDRSFLAA
>NC_009523.1|WP_011958195.1|4380499_4385167_+|cell-division-protein-FtsK
MTVTETNPTEAPAIDAPESFNRPPRILRRLPTDEIEIPAPPGAPTLSLPARLGFILLPAITGIFYLIALIARGGQGGSIWLSLPIVLISFASVAMGIWTYISQRRAQEQARQEYENAYAETLERVRSHLRFLDAEQRNVREANDPEPTTLVQIVEGDGDLPEPRLWERRSNDEDFLRLRIGRGDLPTSVTIKPPRANQFQYTPELRRALDLAREFAMVRDVPITLALRQCGSIGIAGNDAAVVQFVYAFIWQIVVHHSPDEVRLAAFWSAHFDTTWSWLRWLPHTRAFDEESYRLLARYDGDPDHFTQVVESLLRELRQRIEYGVTNRPHVVIVLDSYPTFGAQHDVFLDLMRRGRSLGFSVLFLVSESRQTPGECGGYIELTPRTLLALAGAEGGYTPFSPDSVTRAESERLARTLARIADVSLDQQRELPRNVRFSTILDLGEVKTYDPEQFWKDPSDSWHPAPVGMTGPDAHHDRFAINLNEGFHGVHGIVAGTTGSGKSEFLLTFLMSLAVLHSPDRLNLMLIDFKGGATFKDLEGLPHTVGMVTDLAGYEAERALIAINSELDRRKQRLQRANVANIREYRRRMARNPSLAPLPNLMIVIDEFDEMVRDYPEFVPELIRVAKQGRSLGVHLLFATQQPSQVKEGLLRNLTYWIALRVTSTEDSKTMVTIPDAAYLTTETPGRGYFRVNKQIVAFQSARVTVPYQPFERSDSFGEVDVTGRRKVISAHELGIERFVNDVLRLCEQYRAEPRALEIITPQAAYRYTSAVARRELPAPVNPGEPQAIIRQALQRYFEQTDEDATEAGRRVIRDMVAQLEGKRDVETELALIVEAMARARGPQYASAKYRVWMPPLPDAIPLVDLLDRAPLAPDAWMQAPIGLLDYPTRAEQLPLVLDLAGKHGNLLIVGGSRSGKTVLVRTLMLALAMTHSPADLWMYTIDAGGRGCGMALPPVADGDASDRVLPHLADMLTPQDSVRIERLLVELESAIEDRRSLLRTHGVDTLGEYRRLHQRNPSLPPPPPGILVVIDNLADLVGAQPETTIEALMALIREARPFGIVFVVTAGLAKDVSRWQGLFETRIVLRVNDENDSDTLLGKKVAARIRADQPGRAFLRTGEGAVELHVALPILRDLRRREGRGADDALLSGDMQGELEYSLRIAARRNRFTPEHARPHPLRLLPPRIDLRDLLDEVPAPGIPFARDSLTLRPVTLDFDSGMSHLLIAGGPDSGKSETLRTILTALMLRSTPDETQFVLVDYRRRTFQEILETPFVPAWSIQVPHDPVPLPSSFANTRHDQRDINLAVTEGELAGLCMRLRERLNERVYLGVSRPRLILAVNDLDLMIGREQEYLAQLASLAMRGSDIGFHVILTATDFSSWQSSNQLIKAIRTERCGLFLGKPAEPGSDTPNIAGVGVRWSKTLAKAQFPPGRGLALLRGQQMLVQVAYTGSAMLDEIRQRYRTTAQIDGQNGALDADIGQVAPEHSADAEQNATDIGQVAPERGADAEQNAADIGQVAPEHSADAEQNGSDRDTAPVAVNVSANPVHETTGGRND
>NC_009523.1|WP_011958196.1|4385159_4386011_+|FHA-domain-containing-protein
MTEYELWRYFEQYAQMSNAWWYSVAVLPATIISACAYFLMWLALRRTRQLPKMFLWLCVGSIPVILILPSFYVSINLTDALARVGFVAPANEQQMSRAVALQIGAYLSQIATLGIIGASLAVVILIAAILIGGYAPQQIMQTVQSLSQSFSKAMTRAFGPPRTARVAASSKYGIIKVMRAGAQQGAQFGVTNGAIIGKSDATMVITDDIVSRRHARFEIRNDSVFLIDMNSTNGTYVRRNQRDEELNGDPFELRHGDIIYLGSPSEPESVELRYERTLSGGQS
>NC_009523.1|WP_011958197.1|4386007_4387234_+|VWA-domain-containing-protein
MKRIGIITTLLVALLLVAPAHAQSPACQGLEVHAAQLTFPTVAIQFSVCDAQWNRITTLDRSAVRIIEDGTPITSFTLESQTAHDGQPVQTVPLVNGGTFTLVTTGASIGIVFDASQLLNGTGAGAGDHLGAARAAIEAFLLEPGDPPPPRTRSPGNMERVALFIPADQPAQALQPDGLPGFTQDRYAVINTLRQNLPVRQGKTSLNAAIQAAIDATARDAQENGGKAVVLVVSDGGDALTGDSFNSLISQASQKQVKIVAFGIGTDKALQNNGFRLKQLAEATGGIYLERPDANSVGSAFQLVVQSQPAAIYTVRYDTRIIDDGKSHTVVLEVVTPSGTLSYPFPLTANVPSPNITLAPLGDVLLRQYFMFAIPIAVMLSLVLTLMSGVIFWVGSASSGITRGKTRH

Crispr_ID: NC_009523_82

• CRISPR_ID: NC_009523_82
• CRISPR_location: 4448116-4448206
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_82

Consensus_repeat	Method
GGCAAGATGCCCTCGCTCCCAGGAGCAATGTGA	CRISPRCasFinder

spacers of NC_009523_82

>82.1|4448149|25|NC_009523|CRISPRCasFinder
CCACTGACTTTGTCGCGTCTACGAG

CRISPR arrays and Neighbor proteins around NC_009523_82

CRISPR arrays

The CRISPR arrays of NC_009523_82

>merge|NC_009523|82|4448116-4448206|CRISPRCasFinder
GGCAAGATGCCCTCGCTCCCAGGAGCAATGTGACCACTGACTTTGTCGCGTCTACGAGGGCAAGATGCCCTCGCTCCCAGGAGCGATGTGA

>NC_009523|82|78|4448116-4448206|CRISPRCasFinder
GGCAAGATGCCCTCGCTCCCAGGAGCAATGTGA	CCACTGACTTTGTCGCGTCTACGAG
GGCAAGATGCCCTCGCTCCCAGGAGCGATGTGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_049767540.1|4449707_4450025_+|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009523.1|WP_011958253.1|4450734_4451346_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_157041148.1|4455585_4456083_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041374.1|4444962_4445364_-|phage-holin-family-protein	unknown	unknown	gnl|CDD|377198
NC_009523.1|WP_041335739.1|4450066_4450678_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958245.1|4441878_4443870_-|hypothetical-protein	unknown	unknown	gnl|CDD|369609
NC_009523.1|WP_011958244.1|4438959_4441860_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238742
NC_009523.1|WP_011958254.1|4451796_4452273_-|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl|CDD|224146
NC_009523.1|WP_011958241.1|4435700_4436408_-|bidirectional-hydrogenase-complex-protein-HoxU	unknown	unknown	gnl|CDD|181037
NC_009523.1|WP_011958242.1|4436428_4438042_-|NADH-quinone-oxidoreductase-subunit-NuoF	unknown	unknown	gnl|CDD|224806
NC_009523.1|WP_041335741.1|4454520_4454814_+|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|224583
NC_009523.1|WP_011958243.1|4438274_4438811_-|bidirectional-hydrogenase-complex-protein-HoxE	unknown	unknown	gnl|CDD|236053
NC_009523.1|WP_011958246.1|4444176_4444887_-|hypothetical-protein	unknown	unknown	gnl|CDD|380093
NC_009523.1|WP_011958258.1|4455160_4455598_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041376.1|4446094_4446811_+|ligase-associated-DNA-damage-response-endonuclease-PdeM	unknown	unknown	gnl|CDD|274996
NC_009523.1|WP_011958255.1|4453186_4453768_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958250.1|4446731_4447979_-|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223737
NC_009523.1|WP_011958248.1|4445399_4445966_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958251.1|4448370_4449309_+|acetamidase/formamidase-family-protein	unknown	unknown	gnl|CDD|225279
NC_009523.1|WP_011958257.1|4454810_4455164_+|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_049767540.1|4449707_4450025_+|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	3.86205e-06
NC_009523.1|WP_011958253.1|4450734_4451346_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.10586e-36
NC_009523.1|WP_157041374.1|4444962_4445364_-|phage-holin-family-protein	gnl|CDD|377198	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV. These proteins are predicted transmembrane proteins with probably four transmembrane spans. The 1.E.40 is represented by the mycobacterial 4 phage holin, but it also contains many cyanobacterial. proteobacterial and firmicute proteins. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as in those of the bacteriophage of these organisms. The primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded the enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases.	3.0067e-19
NC_009523.1|WP_041335739.1|4450066_4450678_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.26418e-38
NC_009523.1|WP_011958245.1|4441878_4443870_-|hypothetical-protein	gnl|CDD|369609	pfam07944, Glyco_hydro_127, Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.	2.92651e-44
NC_009523.1|WP_011958244.1|4438959_4441860_+|VWA-domain-containing-protein	gnl|CDD|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	5.22526e-24
NC_009523.1|WP_011958254.1|4451796_4452273_-|thioredoxin-dependent-thiol-peroxidase	gnl|CDD|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	1.61949e-79
NC_009523.1|WP_011958241.1|4435700_4436408_-|bidirectional-hydrogenase-complex-protein-HoxU	gnl|CDD|181037	PRK07569, PRK07569, bidirectional hydrogenase complex protein HoxU; Validated.	2.11044e-162
NC_009523.1|WP_011958242.1|4436428_4438042_-|NADH-quinone-oxidoreductase-subunit-NuoF	gnl|CDD|224806	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion].	0
NC_009523.1|WP_041335741.1|4454520_4454814_+|nucleotidyltransferase-family-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.96189e-29
NC_009523.1|WP_011958243.1|4438274_4438811_-|bidirectional-hydrogenase-complex-protein-HoxE	gnl|CDD|236053	PRK07571, PRK07571, bidirectional hydrogenase complex protein HoxE; Reviewed.	1.35019e-112
NC_009523.1|WP_011958246.1|4444176_4444887_-|hypothetical-protein	gnl|CDD|380093	pfam18029, Glyoxalase_6, Glyoxalase-like domain. This entry comprises a diverse set of domains related to the Glyoxalase domain. The exact specificity of these proteins is uncertain.	1.4473e-09
NC_009523.1|WP_157041376.1|4446094_4446811_+|ligase-associated-DNA-damage-response-endonuclease-PdeM	gnl|CDD|274996	TIGR04123, hypothetical_protein, metallophosphoesterase, DNA ligase-associated. Members of this protein family are an uncharacterized putative metallophosphoesterase associated with a DNA ligase, a helicase, and a putative exonuclease. It may play a role in DNA repair. Its system is present in about 12 % of prokaryotic reference genomes.	6.33568e-94
NC_009523.1|WP_011958250.1|4446731_4447979_-|FAD-binding-oxidoreductase	gnl|CDD|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	2.69956e-51
NC_009523.1|WP_011958248.1|4445399_4445966_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.90629e-33
NC_009523.1|WP_011958251.1|4448370_4449309_+|acetamidase/formamidase-family-protein	gnl|CDD|225279	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion].	3.0312e-106
NC_009523.1|WP_011958257.1|4454810_4455164_+|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	2.56406e-46

Protein sequences

>NC_009523.1|WP_011958250.1|4446731_4447979_-|FAD-binding-oxidoreductase
MSVFHDAPSYWQATAPAPVMSTDLPATAQIVVVGGGFFGAATAYFLARAGAAPLVIEQVAPAYGATGRNGGFHVVGTAEGYADAVARLGRDTARAVMQITLDSRALLRQVIAEEQIACDYREPGHLNLALGDAQYADLRCHVAALRADGFAADLLDRHQTQELIDTPLSDEITGALYGAEDALLHSARLVYGLIAAAQHHGARVAIARVEHLAPQNGCVRVITNRGVLEAGSVVVTVNAWTRDLIPALHGVITPVRGQALAYAPTRRVFRAGIGAAVTPTGEYWHQTPEGAIVIGGCRACAPGRDVGVTEMVPTPAVTAAIEQILPRLFPRLDGLTVTRRWAGLMAFTADYVPVADAALEMPGVWVAGGFCGHGMPFGMRFGQLLAEAALTGATPSALMPFRLARPTLQPPHLQR
>NC_009523.1|WP_157041376.1|4446094_4446811_+|ligase-associated-DNA-damage-response-endonuclease-PdeM
MLDDQTISGLYCSLAGEDVWLLPERALFWKRPATLIIADPHIGKPGAFRAAAIATPEGTTIADLERLSTAIRRCGAQRLIVLGDLLHARSGRTAATMSAVEEWRTRHSSLDIVLVRGNHDTRAGDPPYSWRVMCVDEPWDMAPFTLRHHPESSVAGYTLAGHLHPAARLIGAGKQRLTLPCFWFGAQVGVLPAFGSFTGTKVIAPDPGDQVFVIAEDAVVAVSGAPGGTASAPTASRR
>NC_009523.1|WP_011958248.1|4445399_4445966_-|Uma2-family-endonuclease
MTTVAVTRHRFTVEAYARMREAGLLHEDDRVELLDGEIYQMSPIGARHVSLVNRLTALLVHLAGDAAIVSVQNPIRLDDYNEPQPDLALLRPRDDHYVDALATPGDVLLVIEVADTSLVYDRQEKLPRYARAGIAEVWLVDAGRQVIEQHTMPVADEYTLLQKILPGYRITAVMLPQISFTTDTLFSQ
>NC_009523.1|WP_157041374.1|4444962_4445364_-|phage-holin-family-protein
MARSLVLRWLVTSLAIFAAIQIVPGIEFVGPGWEIGVVALVFGLVNIALRPILTLLTCPLVILTLGLFTLVINALLLLLTASIASSLGVQFRVDSFWSALLGGLVIAIVSTLLLWLAGEMPVRVIIHTNRPDR
>NC_009523.1|WP_011958246.1|4444176_4444887_-|hypothetical-protein
MDEQGYQEFLSAEGVADWVVLHGGATAVFRVGSLGEAARLAGSVANIPGLEGTGVLLTVGDGFLAVRLTRDLWQLAPRHIDLARAISAVARASNAVADRSAVQEVQVAIAAKRDEIDVDFWRAVLGYLPMADDNAVDPLGHGSTVWMQEIDAGKSLRHAMHIDVSVAREQAAVRLQAALAAGGRIVDDSRAPAYWTLADRAGNRVCIVAWPDGSDRKLPEDVSVHISPGSDGILPS
>NC_009523.1|WP_011958245.1|4441878_4443870_-|hypothetical-protein
MKSSLLASLMFTPLPPGIIRPRGWLYRQLRLQADGLSGHLDQFWPDVANSAWIGGSAEGWERGPYWLDGMVPLAYALDDAVLIARVTRWVDHILERQRDDGWLGPVHDTSDTRRKPFDPWPVFVLFKALSQFYEATGDQRVLPAMVRFLHRLDALLDEQPLFDWGRYRWADLVVTIHWLYERIGEPWLLTLASKVHRQGFDWRAHFERFPYTSRQRREDIYPPEPLPGCTFRLDMASHVVNNAMAIKTPGVWFRQSGDPRDRDAVWRIISVLDAFHGQANGVFSGDEHLAGLNPSQGTELCAVVEYQYSLEVLIAILGDARLADRLERMTFNALPAAFAPDMWSHQYVQQVNQIRCAILEDNIYTNNRADANTFGLEPNYGCCTANMHQGWAKFATHLWMRTPDDGLVAVSYAPCELTTSVGGAAVRATVETDYPFREAVRIVVACQSATRFPLLLRIPAWADGALLTVDGMSTTPLPGTFHRIERVWEGTTVIDLHLPMRPAVIRRPSGGAVISGGPLVFALPIGEVWQRIIPDPQGRYAAGERLRPFCPPPIADCLGDWEVLPVTAWNYGLELDDVHPEQSIRIEYHPVGERPFAPEGAPVVAYAPGRRIPGWIEEHGAAASLPSPVISDAPVEELRLIPYGCTNLRIAEFPLVKPRAPVG
>NC_009523.1|WP_011958244.1|4438959_4441860_+|VWA-domain-containing-protein
MIRLSFITPLALILLTLLPALWAFTLLTPRRLAPWRFWSSLALRSVILAALVLAIAGAQIVLPVREVTTVFLIDVSDSMTPAQRERALQYVNDALAAMPAGDRAAVVVFGENALVERAPGPIGALGRLSSTPMTTRTNLQEAVQLGLALFPAETQKRLVLISDGGENAGRVADAAQLASIRKVPIDVVYLPGERGPDVIVAGLSAPAVVREGQDIIVQANISSNYATGGRLQTFVDGQLIGEQELSIPEGSSTVDIRVPSGETGFRRLEVRLDADGDTEPQNNRGAAFTEVQGPPRLLLIASDESRAANLRNALLAAGVRVDLLPPSQAPATLAQLGAYAGVMIVDTPAREMPRTLLEALPAYVRELGRGLAMVGGVDSFGAGGYRRTPLEPMLPVLLDPLDTKQQPDLALVMVIDRSGSMAEPVAGGRRNKLDLAKEAVYQASLGLTPIDQVGLVVFDDTANWVLQLQPLPSMVEIERALGSFGIGGGTNIRPGIEQAALALASTDAKIKHVLLLTDGIAESNYSDLIAQMRASGITISTVAVGLDANPNLVDVANAGGGRSYRVTSIDEVPRIFLQETIIAAGRDIIEQPIEPQLGLSSPIIRSLGGLPPLYGYNGTEVREAARTLLLTPDGKPLLAQWQYGLGRVVAWTSDTQGRWARDWIAWDRFPQFAGGLADLLLPPRESGLLELRATAAGPRAFLELIAQDEQGRPLNNLAIAGRAVDPQNQGATVQFQQIGPGRYRAAVDTPSPGVYLAQVAASDAEGRQIGVAVTGIVVSYSLEYSAQRENLPLLTEVASISRGRINPSPETAFASPNQEVGSVREIGFPLLWLALILWPLDIAARRVMLRLEDVAPWLERLRRRRPSVVAAPEASATMTRLGTAKRRATAARPSSISVERSGIDAPTVPQTVVPTDQASQGRAPAPPPQTTEQRARPTATRPEAAEEQFARLLAAKQRARRKSEDR
>NC_009523.1|WP_011958243.1|4438274_4438811_-|bidirectional-hydrogenase-complex-protein-HoxE
MAATRFQPPAPDQTLHPSGDNRFKLLEATMKKHQYRPDALIEVLHRAQELFGYLSTDLLLFIANSLHLPPSRVYGVATFYHFFSLAPKGEHSCVVCLGTACYVRGAAAILAAAEQMLGIKAGHTTPDGRLSLETARCLGACGIAPTVVFDGTVTGHQTPEQVQVWLERLTGEGLKAKG
>NC_009523.1|WP_011958242.1|4436428_4438042_-|NADH-quinone-oxidoreductase-subunit-NuoF
MDLNELLAIAEHENAMRRSICIRCCTALGCQSAGSLSLKQRLEEAVAEVDRTDIEVMGVGCMGLCGHGPLVRVDPEGTLYEHVRAADAPSIVAALDGGEATAPKGDPHHPFFTLQKRIVLENSGIIDPERIESYIAAGGYQALYHALHEMTPAEVIDVVTRSGLRGRGGAGYPTGLKWATVAKSHGDRKYVVCNADEGDPGAFMDRSIIESDPHKVLEGMAIAAYAVGADQGYVYVRAEYPLAIQRLQRAIAQARRHGLLGAQIFDSGFTFRIDIRVGAGAFVCGEETALMASIEGRRGQPRPRPPYPAESGLWGRPTLINNVETFANIPPIIRNGAEWFAAIGAETSKGTKVFALTGKIRHTGLIEVPMGVTLRQIVEEMGGGVPDGRVKAVQTGGPSGGCIPAALLDTPVDYESLQRVGSIMGSGGMVVMDDATNMVDVAHFYMEFCKDESCGKCIPCRAGTAQMLHMLDLIRAGQATIADLEQLEQLCVMVKETSLCGLGQSAPNPVLSTMRYFRQEYEALLADRDRTGESTDG
>NC_009523.1|WP_011958241.1|4435700_4436408_-|bidirectional-hydrogenase-complex-protein-HoxU
MAARTFTIDGQLISAREGETILQAARDHGIFIPTLCHLDGVSDVGACRLCLVEIEGSRMLRPACVTPVVEEMVVRTDTVRLREYRRMIIELLFAERNHVCAVCVANGHCELQDLAVAVGMDHVRFDYAFPHCDVDISHPLFGVDHNRCVLCTRCVRVCDEVEGVHTWDVAGRGADARVITDMRQPWGESRSCTSCGKCVLACPTGAIFRRGATVGEMERDRNKIAYIVAARDQRW
>NC_009523.1|WP_011958251.1|4448370_4449309_+|acetamidase/formamidase-family-protein
MAEHTLRPDQIHHKWDNSLPPAIEIEPGDIVHCETAEVTNNQVTPGCDASVLTNLDFDQLYPLAGPIFVKGAEPGDILEVEILRMQTLDWGWTGIIPGLGLLANDFTAPYIRHFDLSNGVTAPLRDDIHIPIQPFCGTMGVALDEPGAFDVLPCGKAGGNIDTRHLNVGAKLYLPVFVPGALFSAGDCHAAQGDGEVCVTGIECPMQFSLRFNVIKGRSLRPWSYQFFTPPGPIQPAYDEKGYFVTTAIGPDLMVNAQNAVRDMIDWLGREKGLSREDAYILCSLAGDLRISQIVDAPNWCVSFYMALSVFR
>NC_009523.1|WP_049767540.1|4449707_4450025_+|nucleotidyltransferase-domain-containing-protein
MATVNEVVKKCKMALESHYGTQLKGVILYGSTARNQADSMSDIDLLILLGQPFDYFSELRQVIDVLYPIQLESERLISARPVSLEEFERGSIQLYRNAKREGIFV
>NC_009523.1|WP_041335739.1|4450066_4450678_+|Uma2-family-endonuclease
MTTLVIKTDSPVVAGPLQGHWTLADWEALPNDGNRYEIIDGVLYMTTAPHSFHQWIILSLIQFVGLPAKERGLGYMFMAPIGVIMPGCDPVQPDVIFIRAANAEIIRNGRIYGVPDLIIEVLSPGTRAYDERVKLAAYAAAGVPEYAMVDPETRQVRRHLLEAPGRYAAPIVADATDQVAFACLPDITFRVADLFAGAPDTTM
>NC_009523.1|WP_011958253.1|4450734_4451346_+|Uma2-family-endonuclease
MTALVIKTDSPVVAGPLQGHWTLADWEALPDDGNRYEIIDGVLYMTTAPHSFHQWIIRRLERFIGIATEDAGPAYCFPAPVGVIMPGCDPVQPDYVVVLQSRADLFRNGRIYGVPDLIIEVLSPGTRAYDERVKLVAYAAAGVPEYAMVDPETRQVRRHLLEAPGRYAAPVIADATDQVAFACLPDITFRVADLFAGAPDTTL
>NC_009523.1|WP_011958254.1|4451796_4452273_-|thioredoxin-dependent-thiol-peroxidase
MAERPLNVGDQAPDFTALTDTGATVKLSDFRGKRVILYFYPKDDTSGCTTQACGFRDAYPQIEEKNAVVLGVSPDGVKSHQKFKTKHNLPFTLLVDEDHAIAEAYGVWVEKSMYGKKYWGIERSHFVIDENGAIVEAAVKVKPEESVKRAVAALGIER
>NC_009523.1|WP_011958255.1|4453186_4453768_+|hypothetical-protein
MAATNVHLPTPTRDLVTSYIQQYNDVQNVVENALGKLIRCCPENRTFEDVLLKVVTLNDLYRTGILATYQVAEHIFRLQVDDAIQAGAPEIVHRIAHITLGEKERNNYSFATKYCAWHNPTAYAIYDRFVDQMLWGYQKQDRFAQFRQEELRWYPRFMEVINAFRSHYQLEDVALKDIDKFLWLAGKQYYPGI
>NC_009523.1|WP_041335741.1|4454520_4454814_+|nucleotidyltransferase-family-protein
MKTLTEIRNIIRQQSDILADKYGVAVVAIFGSYARGEQVGESDLDLLVEFLRPISLLELVGAEIYLSEVLGVKADLVPKRDVRAELRESILKEAVAL
>NC_009523.1|WP_011958257.1|4454810_4455164_+|DUF86-domain-containing-protein
MSRNVLVYIKDILQNMRDAEQFIQGMTYEQFVADKKTVNAILRSIEVIGEAAKRVPDDVRAQYPQIPWKEMAGMRDKVIHLYFSVDNETVWLVVKERIPSLQPLIEQIVRDLEDQGT
>NC_009523.1|WP_011958258.1|4455160_4455598_+|hypothetical-protein
MTRLYLQEMVDNIRFDCLPVTWNTFDLSAFSRTKKLWDYQRKAVENAIKTLWKYYENVHNYQPDENAETNRERKRKFFRWYQDNGLSEALDISLAKSHRLAHLLREYYTAADGKVAYRQFINRACFWMAMGIGKTLVLVKRCCES
>NC_009523.1|WP_157041148.1|4455585_4456083_+|hypothetical-protein
MRELIQRGEIPPHDILVLSCRDDLIEQLKQHVHQRKIDGYSAIFEKASSEKKDFNYNGKMVKVFAFLHTADKDGLPAKYRMYWFDNVEEMLTGVLQQRDAAEPEHSHAWGTRETESCATSFREILYYVMLFRYQRAIRQLRRHRPRGLPPIPLSLTTARRRTQRT

Crispr_ID: NC_009523_83

• CRISPR_ID: NC_009523_83
• CRISPR_location: 4462856-4462941
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_83

Consensus_repeat	Method
CGCGCCTCACGCGGCGACCGAAATGA	CRISPRCasFinder

spacers of NC_009523_83

>83.1|4462882|34|NC_009523|CRISPRCasFinder
ATTTCGGTCTACCCTCTGCTGGAAACGGGCGCCT

CRISPR arrays and Neighbor proteins around NC_009523_83

CRISPR arrays

The CRISPR arrays of NC_009523_83

>merge|NC_009523|83|4462856-4462941|CRISPRCasFinder
CGCGCCTCACGCGGCGACCGAAATGAATTTCGGTCTACCCTCTGCTGGAAACGGGCGCCTCGCGCCTCACGCGGCGACCGAAATGA

>NC_009523|83|79|4462856-4462941|CRISPRCasFinder
CGCGCCTCACGCGGCGACCGAAATGA	ATTTCGGTCTACCCTCTGCTGGAAACGGGCGCCT
CGCGCCTCACGCGGCGACCGAAATGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_041335741.1|4454520_4454814_+|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|224583
NC_009523.1|WP_011958253.1|4450734_4451346_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_157041148.1|4455585_4456083_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041149.1|4469897_4470413_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041335739.1|4450066_4450678_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958255.1|4453186_4453768_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_049767540.1|4449707_4450025_+|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009523.1|WP_011958267.1|4466741_4467707_+|cytochrome-c-biogenesis-protein	unknown	unknown	gnl|CDD|273492
NC_009523.1|WP_011958270.1|4468451_4469411_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl|CDD|376439
NC_009523.1|WP_011958264.1|4464173_4465256_+|hemin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|238569
NC_009523.1|WP_041335748.1|4463380_4464193_+|heme-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|237422
NC_009523.1|WP_011958258.1|4455160_4455598_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958257.1|4454810_4455164_+|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236
NC_009523.1|WP_011958269.1|4468047_4468407_+|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl|CDD|225209
NC_009523.1|WP_011958271.1|4469511_4469895_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958262.1|4458923_4462292_+|ATP-binding-protein	unknown	unknown	gnl|CDD|224400
NC_009523.1|WP_011958265.1|4465252_4466317_+|iron-ABC-transporter-permease	unknown	unknown	gnl|CDD|376439
NC_009523.1|WP_011958268.1|4467703_4468051_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958254.1|4451796_4452273_-|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl|CDD|224146
NC_009523.1|WP_011958266.1|4466333_4466717_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_041335741.1|4454520_4454814_+|nucleotidyltransferase-family-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.96189e-29
NC_009523.1|WP_011958253.1|4450734_4451346_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	4.10586e-36
NC_009523.1|WP_041335748.1|4463380_4464193_+|heme-ABC-transporter-ATP-binding-protein	gnl|CDD|237422	PRK13548, hmuV, hemin importer ATP-binding subunit; Provisional.	2.01723e-109
NC_009523.1|WP_041335739.1|4450066_4450678_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.26418e-38
NC_009523.1|WP_049767540.1|4449707_4450025_+|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	3.86205e-06
NC_009523.1|WP_011958270.1|4468451_4469411_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl|CDD|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.16048e-17
NC_009523.1|WP_011958264.1|4464173_4465256_+|hemin-ABC-transporter-substrate-binding-protein	gnl|CDD|238569	cd01149, HutB, Hemin binding protein HutB. These proteins have been shown to function as initial receptors in ABC transport of hemin and hemoproteins in many eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	2.76735e-97
NC_009523.1|WP_011958267.1|4466741_4467707_+|cytochrome-c-biogenesis-protein	gnl|CDD|273492	TIGR01191, Heme_exporter_protein_C, heme exporter protein CcmC. This model describes the cyt c biogenesis protein encoded by ccmC in bacteria. It must be noted an arabidopsis, a tritcum and a piscum plant proteins were recognizable in the clade. Quite likely they are of organellar origin. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes, ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in the heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c. [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Other].	2.23562e-22
NC_009523.1|WP_011958254.1|4451796_4452273_-|thioredoxin-dependent-thiol-peroxidase	gnl|CDD|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	1.61949e-79
NC_009523.1|WP_011958269.1|4468047_4468407_+|antibiotic-biosynthesis-monooxygenase	gnl|CDD|225209	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only].	3.7767e-27
NC_009523.1|WP_011958262.1|4458923_4462292_+|ATP-binding-protein	gnl|CDD|224400	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only].	5.85789e-63
NC_009523.1|WP_011958265.1|4465252_4466317_+|iron-ABC-transporter-permease	gnl|CDD|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	6.99451e-86
NC_009523.1|WP_011958257.1|4454810_4455164_+|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	2.56406e-46

Protein sequences

>NC_009523.1|WP_011958262.1|4458923_4462292_+|ATP-binding-protein
MAITNQERIGKALDLLRQGLQPFIERELQNHYGKYWVTNVTGSWRNELTWRDDDTPHLDSAALLKIMWEQWNDVFRKTLGFTERSLVSELREWRNKWAHQESFSTDDTYRVLDSAARLLNAVSAPAQADEIERMKIELLRVRFDEQVRGEKRKAGGSLIEAAASGMLKPWREVVTPHPDVASGRYQQAEFAADLWQVHLGEGSDEYRDPVEFFRRTYLTESLKRLLVGAVKRLSGQGGDPVVQLQTNFGGGKTHSMLALYHLFSGHSPAALPGVDTVLAEASVTSLPMVKRVVLVGNKLSPGNPMVKPDGTVVRTLWGELAYQLGGAAAYARIASDDEHATSPGDRLRELFNTYGPCLILIDEWVAYARQLHDQSDLPGGSFETQFSFAQALTESAKLADRCLLVISLPASDTATSPHAQADDVEVGGLRGREALDRLRNVVGRVESSWRPATAEEGFEIVRRRLFQPITGPEAFKYRDVTARAFAELYANHAAEFPPECRATDYERRIQAAYPIHPEIFDRLYEDWSTLVTFQRTRGVLRLMAAVIHCLWEKGDRSPLILPSTIPIDDPRVQFELTRYLSDNWAPIIQKDVDGPNSLPLKIDGETPNVGKLSATRRVARTVYLGSAPKAAARRGLEDRRIKLGCVMPGESPSVFGDALRRLAATATYLYQDGSHFWYDTQPTVTKLAEDRAEQLRRDPDRVAMELEKRLRTNLRNSGGFSRVHPLPRSGADVPDDLETRLVVLPHEHPYSKEADNAAEKAARAILESRGNVPRHYRNTLVFLAADRVRLQDLDEALRTFLAWDSILSERETLNLSPFQVRQAETQHRSANQTVDARLPETYCWLLVPAQEKPQSPMTWQALRLTGTDALAVRAGKKLQSEELLLNSLGATILRSYLDRIPLWRGDHVEVRQLVEDFAKYLYLPRLAEPGVLIRAICDGIAMLTWADETFAYAERYDEQTGRYAGLQAGERITLTVDGGGVLVKPDVAQRQLEADAREARPAVSSEKGATNPGAPHSSPLTPHSSPLTPHSSPLTPHSSPLTPHATPRRFYGAVHLDPNRVGRDAGRIAEEVIAHLIGQPGAQVTVTLEIEARLPDGFSDNIVRIVIENGRTLKFRNCEFEE
>NC_009523.1|WP_157041148.1|4455585_4456083_+|hypothetical-protein
MRELIQRGEIPPHDILVLSCRDDLIEQLKQHVHQRKIDGYSAIFEKASSEKKDFNYNGKMVKVFAFLHTADKDGLPAKYRMYWFDNVEEMLTGVLQQRDAAEPEHSHAWGTRETESCATSFREILYYVMLFRYQRAIRQLRRHRPRGLPPIPLSLTTARRRTQRT
>NC_009523.1|WP_011958258.1|4455160_4455598_+|hypothetical-protein
MTRLYLQEMVDNIRFDCLPVTWNTFDLSAFSRTKKLWDYQRKAVENAIKTLWKYYENVHNYQPDENAETNRERKRKFFRWYQDNGLSEALDISLAKSHRLAHLLREYYTAADGKVAYRQFINRACFWMAMGIGKTLVLVKRCCES
>NC_009523.1|WP_011958257.1|4454810_4455164_+|DUF86-domain-containing-protein
MSRNVLVYIKDILQNMRDAEQFIQGMTYEQFVADKKTVNAILRSIEVIGEAAKRVPDDVRAQYPQIPWKEMAGMRDKVIHLYFSVDNETVWLVVKERIPSLQPLIEQIVRDLEDQGT
>NC_009523.1|WP_041335741.1|4454520_4454814_+|nucleotidyltransferase-family-protein
MKTLTEIRNIIRQQSDILADKYGVAVVAIFGSYARGEQVGESDLDLLVEFLRPISLLELVGAEIYLSEVLGVKADLVPKRDVRAELRESILKEAVAL
>NC_009523.1|WP_011958255.1|4453186_4453768_+|hypothetical-protein
MAATNVHLPTPTRDLVTSYIQQYNDVQNVVENALGKLIRCCPENRTFEDVLLKVVTLNDLYRTGILATYQVAEHIFRLQVDDAIQAGAPEIVHRIAHITLGEKERNNYSFATKYCAWHNPTAYAIYDRFVDQMLWGYQKQDRFAQFRQEELRWYPRFMEVINAFRSHYQLEDVALKDIDKFLWLAGKQYYPGI
>NC_009523.1|WP_011958254.1|4451796_4452273_-|thioredoxin-dependent-thiol-peroxidase
MAERPLNVGDQAPDFTALTDTGATVKLSDFRGKRVILYFYPKDDTSGCTTQACGFRDAYPQIEEKNAVVLGVSPDGVKSHQKFKTKHNLPFTLLVDEDHAIAEAYGVWVEKSMYGKKYWGIERSHFVIDENGAIVEAAVKVKPEESVKRAVAALGIER
>NC_009523.1|WP_011958253.1|4450734_4451346_+|Uma2-family-endonuclease
MTALVIKTDSPVVAGPLQGHWTLADWEALPDDGNRYEIIDGVLYMTTAPHSFHQWIIRRLERFIGIATEDAGPAYCFPAPVGVIMPGCDPVQPDYVVVLQSRADLFRNGRIYGVPDLIIEVLSPGTRAYDERVKLVAYAAAGVPEYAMVDPETRQVRRHLLEAPGRYAAPVIADATDQVAFACLPDITFRVADLFAGAPDTTL
>NC_009523.1|WP_041335739.1|4450066_4450678_+|Uma2-family-endonuclease
MTTLVIKTDSPVVAGPLQGHWTLADWEALPNDGNRYEIIDGVLYMTTAPHSFHQWIILSLIQFVGLPAKERGLGYMFMAPIGVIMPGCDPVQPDVIFIRAANAEIIRNGRIYGVPDLIIEVLSPGTRAYDERVKLAAYAAAGVPEYAMVDPETRQVRRHLLEAPGRYAAPIVADATDQVAFACLPDITFRVADLFAGAPDTTM
>NC_009523.1|WP_049767540.1|4449707_4450025_+|nucleotidyltransferase-domain-containing-protein
MATVNEVVKKCKMALESHYGTQLKGVILYGSTARNQADSMSDIDLLILLGQPFDYFSELRQVIDVLYPIQLESERLISARPVSLEEFERGSIQLYRNAKREGIFV
>NC_009523.1|WP_041335748.1|4463380_4464193_+|heme-ABC-transporter-ATP-binding-protein
MIEACALSYYAGDRCLLDAVSLTVNGGEVVAIVGPNGAGKSTLISLLAGDLPPTAGRVLLGGIPLERMRAGDQALRRSVLRQRIHVALPFTTFEVVLMGRTPHLRGRSEGREDVVIVQNALNRTGMAPFAERLFPTLSGGEQTRASLARVLAQQAPLVLLDEPTAALDLRHQHAALRLARAVAASGGAAVIVLHDLNLAAGYADRIGILHEGRLVAIGAPWDVLRPELLSAVYGIPIVVHPHPHTGAPLLLTLPDVPSSGQGGVYEVLEA
>NC_009523.1|WP_011958264.1|4464173_4465256_+|hemin-ABC-transporter-substrate-binding-protein
MKSWKPDHRSVAATGRLRQTLLLFSLAVAVLLAACGTTSSSGGVSSPTALPAPTSPSAAPASLASGAEMAPGEAEPQLPATVVDYQGEQVTITSIERIVSLNGDITEIIFALGMGEYVVGVDSSATYPPERTKMLPNIGYQRRLSAEGILSLNPTLVIGDEAAGPPETLAQIRAAGVPLAITADPPSLDAPQQKIRFVAQALGIPQRGERLAAQVEAEIAAARDLARRITNPPHVLFLYLRGTDVQQVAGRNTAVDVMIAAAGGINAAADAGIVEFKPLSPEVVIAAQPDVLLVLDKGLESVGGVDGLLKIPGLADTPAGRQRRIIALDDLYLLGMGPRTGQALTDLTIAFYDAAQGSRP
>NC_009523.1|WP_011958265.1|4465252_4466317_+|iron-ABC-transporter-permease
MSAAMTITLQRIAGWRRTGLLPALILALAVAVALGAGIGPVVVPPDVMLAILLRKTGILLDVPVSMQQEAIFWTIRLPRVALGVLAGAALAVSGALLQGVFRNPLADPGLIGVSSGAALGAVAVIVLGISSLGLMTLPLAAFLTGTATTFFVYRLAQRHGRTDVATLLLVGLALNAMAGAATGLLTYLADDAQLRSIVFWTMGGLGGALWETVLVAAPWIAVSLALAPRLGRALNLFALGETEARHLGIEVEQVKRAAILLSALATGTAVALVGPIGFIGLIVPHIVRLIAGPDHRLLLPACALGGASLLVLADLVARTMAAPAEVPVGLITACAGGPFFLALILRARRQYGWG
>NC_009523.1|WP_011958266.1|4466333_4466717_+|hypothetical-protein
MNFRMAPYRVLAQNGRNWYILLLSDGRLQLDFGPFAMALHQDAFGLLHGLVEAATQHSSATAGCVAHAGAERSIWIDPQYGALLLAFDSVVLRFMPQELLIFVQLCREASQKLSLTPITLPLEGNLN
>NC_009523.1|WP_011958267.1|4466741_4467707_+|cytochrome-c-biogenesis-protein
MAQRLGSISRLLVGVWLAGVTIATFVIIPPYQGLGDAGRIVIVHVPTAWVAVIAFTISAVYSALYLRRRRLTDDAKATAAAEGGLIFTLLATLTGMVFSQVAWGVFWNWDPRQVTILVLLLIYAALFALRSAIDDPERRRRMAAVYSLFAFVTMPFLMFVAPRMAESTLHPNCAFIKGSDCEGITLKIGHVGLLGDQKVQLLGLEQQGDTVVAQVKVSTPGLESEAVLLPGYDLTTRSYTDRPTFPGQRFTLALEAVDLERGEARINMEAPGSGLLENQRTLWVFLAANIGFTLLFIWMFLVRSQVLSLEVQIAQRKVALA
>NC_009523.1|WP_011958268.1|4467703_4468051_+|hypothetical-protein
MSESTSAIYISMATVLLVWVTIAVYLMQVSSRLRSLKRDLNGGSPGNRPASGTADAAPDVATEPPSVTADQWTWMAWYAALWYGCIDTLRLLDRSRRAPKVVGRRRNIGYQEKFV
>NC_009523.1|WP_011958269.1|4468047_4468407_+|antibiotic-biosynthesis-monooxygenase
MITTANRIFVNPEYADLFEENFRNRAGLVDRMPGFVSNQLLRPVNPGDPYIVLTVWESRAHFENWVRSDEFRLGHARSSSLPPETFSAPSKLELHEIILDTSRPDLIPEPRGKPFRAHG
>NC_009523.1|WP_011958270.1|4468451_4469411_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTRLLRWSGSTLSWHLIVSLGALLVMMTMSLALGSVALTPARFLTALTMPDADPVAAAIVFNVRLPRVLLACCAGALTAMAALLLAPHEQGAAPDPGWSGMMPLGALGAVIALTVSTGSPWWSVMGALVGCGAGVALYAATQRWRQRRIIGFVVALVAPVCAFGLLIGEVRIATWVRWCLGSLEQRDWQAWNTAWPILLTGVLLVVAAEYRPSAHRWRRYVSATVATAAATVAAGALGWIGSTAARRAQASDGSPVRRIVLAGLWGALLVVGIDLAARGVTALLPSPGLIGELPLGALLIVISGAAYVHDRVRSRSHRA
>NC_009523.1|WP_011958271.1|4469511_4469895_+|hypothetical-protein
MALADAVDRVMARVLFVTPPPPADEEVMPEEAKEGRTIGLALVISGVRCTLQYLILPVVLPLIGLASGFSLIIAMALDLVALWLLISGLRYLWQTRHPHRFDMLPLSAAILAIIVGSFLYDVWRLVS
>NC_009523.1|WP_157041149.1|4469897_4470413_+|hypothetical-protein
MMLRILTLIAGWMALARLHLGIANEDGAHDPSAPFVIADPTIAQAIYGRLSPAAPVAYYTFTVPDAIGVRVMLLIPSRDCQSGFMARFALVGPGLPSGRLFPTTHFTPLTIAGRTYRLIQSYVPPLPSAGTYWIEVHCDAGSGVYCLCIGTREGGHADAAMRARIERMLEG

Crispr_ID: NC_009523_84

• CRISPR_ID: NC_009523_84
• CRISPR_location: 4536914-4537009
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_84

Consensus_repeat	Method
TATAGCCCGCGCAGGCGGGCTTTGCCTT	CRISPRCasFinder

spacers of NC_009523_84

>84.1|4536942|40|NC_009523|CRISPRCasFinder
GGCTAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCCGG

CRISPR arrays and Neighbor proteins around NC_009523_84

CRISPR arrays

The CRISPR arrays of NC_009523_84

>merge|NC_009523|84|4536914-4537009|CRISPRCasFinder
TATAGCCCGCGCAGGCGGGCTTTGCCTTGGCTAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCCGGTATAGCCCGCGCAGGCGGGCTTCGCCTT

>NC_009523|84|80|4536914-4537009|CRISPRCasFinder
TATAGCCCGCGCAGGCGGGCTTTGCCTT	GGCTAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCCGG
TATAGCCCGCGCAGGCGGGCTTCGCCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157041380.1|4544481_4545555_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958323.1|4531121_4533032_-|hypothetical-protein	unknown	unknown	gnl|CDD|227829
NC_009523.1|WP_011958327.1|4537133_4539956_-|hypothetical-protein	unknown	unknown	gnl|CDD|375050
NC_009523.1|WP_011958322.1|4529113_4531111_-|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_157040978.1|4547785_4547923_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958317.1|4524256_4525165_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_009523.1|WP_011958330.1|4542022_4542985_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_157041140.1|4547525_4547663_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041378.1|4539979_4541101_-|cytochrome-c-peroxidase	unknown	unknown	gnl|CDD|188554
NC_009523.1|WP_011958318.1|4525204_4526212_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009523.1|WP_041334106.1|4543781_4544576_+|CBS-domain-containing-protein	unknown	unknown	gnl|CDD|341361
NC_009523.1|WP_011958333.1|4545551_4547339_-|hypothetical-protein	unknown	unknown	gnl|CDD|376479
NC_009523.1|WP_011958319.1|4526276_4527545_-|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl|CDD|274511
NC_009523.1|WP_041334102.1|4533084_4535892_+|glycosyl-transferase	unknown	unknown	gnl|CDD|273955
NC_009523.1|WP_157041155.1|4527696_4528707_-|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NC_009523.1|WP_011958325.1|4535892_4536510_-|glucosaminidase-domain-containing-protein	unknown	unknown	gnl|CDD|376625
NC_009523.1|WP_011958329.1|4541342_4541741_+|VOC-family-protein	unknown	unknown	gnl|CDD|319898
NC_009523.1|WP_011958334.1|4548751_4550194_+|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl|CDD|349772
NC_009523.1|WP_011958321.1|4528777_4529092_-|methylated-DNA--protein-cysteine-methyltransferase	unknown	unknown	gnl|CDD|226219
NC_009523.1|WP_049767546.1|4536593_4536806_+|DUF433-domain-containing-protein	unknown	unknown	gnl|CDD|377269

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958323.1|4531121_4533032_-|hypothetical-protein	gnl|CDD|227829	COG5542, COG5542, Predicted integral membrane protein [Function unknown].	4.92189e-06
NC_009523.1|WP_011958327.1|4537133_4539956_-|hypothetical-protein	gnl|CDD|375050	pfam17210, SdrD_B, SdrD B-like domain. This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.	2.20874e-13
NC_009523.1|WP_011958322.1|4529113_4531111_-|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.79482e-112
NC_009523.1|WP_011958317.1|4524256_4525165_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.08375e-87
NC_009523.1|WP_011958330.1|4542022_4542985_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.82429e-20
NC_009523.1|WP_157041378.1|4539979_4541101_-|cytochrome-c-peroxidase	gnl|CDD|188554	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family. This model describes a subfamily of di-heme proteins related to the di-heme cytochrome c peroxidase and to MauG (methylamine utilization G), an enzyme that performs a tryptophan tryptophylquinone modification to the methylamine dehydrogenase light chain.	2.77003e-118
NC_009523.1|WP_011958318.1|4525204_4526212_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.49228e-76
NC_009523.1|WP_041334106.1|4543781_4544576_+|CBS-domain-containing-protein	gnl|CDD|341361	cd04584, CBS_pair_AcuB_like, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the ACT domain. The putative Acetoin Utilization Protein (Acub) from Vibrio Cholerae contains a CBS pair domain. The acetoin utilization protein plays a role in growth and sporulation on acetoin or butanediol for use as a carbon source. Acetoin is an important physiological metabolite excreted by many microorganisms. It is used as an external energy store by a number of fermentive bacteria. Acetoin is produced by the decarboxylation of alpha-acetolactate. Once superior carbon sources are exhausted, and the culture enters stationary phase, acetoin can be utilised in order to maintain the culture density. The conversion of acetoin into acetyl-CoA or 2,3-butanediol is catalysed by the acetoin dehydrogenase complex and acetoin reductase/2,3-butanediol dehydrogenase, respectively. Acetoin utilization proteins, acetylpolyamine amidohydrolases, and histone deacetylases are members of an ancient protein superfamily.This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria. Acetoin is a product of fermentative metabolism in many prokaryotic and eukaryotic microorganisms. They produce acetoin as an external carbon storage compound and then later reuse it as a carbon and energy source during their stationary phase and sporulation. In addition these CBS domains are associated with a downstream ACT (aspartate kinase/chorismate mutase/TyrA) domain, which is linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. Pairs of ACT domains bind specifically to a particular amino acid leading to regulation of the linked enzyme. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	3.5249e-16
NC_009523.1|WP_011958333.1|4545551_4547339_-|hypothetical-protein	gnl|CDD|376479	pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain. Copper amine oxidases are a ubiquitous and novel group of quinoenzymes that catalyze the oxidative deamination of primary amines to the corresponding aldehydes, with concomitant reduction of molecular oxygen to hydrogen peroxide. The enzymes are dimers of identical 70-90 kDa subunits, each of which contains a single copper ion and a covalently bound cofactor formed by the post-translational modification of a tyrosine side chain to 2,4,5-trihydroxyphenylalanine quinone (TPQ). This family corresponds to the catalytic domain of the enzyme.	0.00912915
NC_009523.1|WP_011958319.1|4526276_4527545_-|PQQ-binding-like-beta-propeller-repeat-protein	gnl|CDD|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	7.28801e-25
NC_009523.1|WP_041334102.1|4533084_4535892_+|glycosyl-transferase	gnl|CDD|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	5.60657e-163
NC_009523.1|WP_157041155.1|4527696_4528707_-|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.87657e-114
NC_009523.1|WP_011958325.1|4535892_4536510_-|glucosaminidase-domain-containing-protein	gnl|CDD|376625	pfam01832, Glucosaminidase, Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.	9.09342e-09
NC_009523.1|WP_011958329.1|4541342_4541741_+|VOC-family-protein	gnl|CDD|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	1.47122e-17
NC_009523.1|WP_011958334.1|4548751_4550194_+|polysaccharide-biosynthesis-tyrosine-autokinase	gnl|CDD|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	3.0689e-43
NC_009523.1|WP_011958321.1|4528777_4529092_-|methylated-DNA--protein-cysteine-methyltransferase	gnl|CDD|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	3.22309e-30
NC_009523.1|WP_049767546.1|4536593_4536806_+|DUF433-domain-containing-protein	gnl|CDD|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	2.26463e-20

Protein sequences

>NC_009523.1|WP_049767546.1|4536593_4536806_+|DUF433-domain-containing-protein
MVGKPVIKGTRLTVEYVLRLLAHGATVAEILEEYQDLTPEDIQACLLFASTSLANTVFLPLKAGSFCASR
>NC_009523.1|WP_011958325.1|4535892_4536510_-|glucosaminidase-domain-containing-protein
MFSEQTPILGRPTAGVAQIAAFILARPHGEYTTHDIEAVIVPVYWQLCAEVGIDPTLAVAQMIHETGNLTSFWAARPQRNPAGIGVTGQKQATPPPDTNGWAFNPQRQQWEAGVSFATWEHDAIPAHVGRLLAYALPIGAENPVQRAAIERALRYRALPARMRGSAPILKQLGRVHNPTGQGWASPGIDYGAKIAAIATRIVTGR
>NC_009523.1|WP_041334102.1|4533084_4535892_+|glycosyl-transferase
MDNIRRNRRSRLLAGRRLPGRAPLTPGMLRRGRAVETEMRFGGILARLMLAFLALAGVVALGVAGTAYSAYSDLAASLKPRLAAIENRESFETTRLYDRNGQLLYEFFGAGKRTRVPLDQISTYLISATVAIEDRTFFENRGVDYLGIARTLFSSLQAGEETGGASTITQQLIKNVVLSDEERRYENRYQRKLIEIILAQELSEQYSKNDILELYLNEIYYGNLAYGVEAAANVYFDIPAKDLNLPQAALLAGLPQLPGVYDPFNYLDGGVLKGVRLEDGWLSPAYRLPTGTPPPKWRQVAVLRQMVDEGMITDQVARRAAAVDLRFASQEVPLNAPHFVFYVRRLLEEEYGPQFANMGLSIYTTIDLDLQRMAQEKAAERIQELEARNIHNAAVVILQPNTGQILAMVGSIDYNRTIPTKTPGETGNVLDGQVNVAVRERQPGSALKPFTYLAAMERGMTPETVIWDVPTKFPLLAGMNEWYEPQNYNGRWNGPVRMRAALANSLNMPAVKALKFAGIDQTIGLLRRAGITTLRRGSGFYGLALTLGGGEVTPLELTAAYNTLASGGRYYPPVAILKVVDANGRTLQEFRPTIRPQTLNPDHVAIITDILSDDAARAPVWGLNSKLKLSRPAAVKTGTSNDWRDAWAVGYTPYVTVGVWTGNNNNEPTKKVESLTGGGVIWHNIMEELFANPKFQRLLAEPYPDGRLPIDFTKPSWLVRRPICPLPGPYNAYREELFAPDMLASNAIPVSDTTQLCQNIFTEVPVVQLSDSPIEATALITDTAIAGQWYCTPGEDQRIAPDQVTTILAWNVPPPDPDEQIVYTWEGMSNTLGNRTVAPIVAAAIPACTADMLIPSTPPTPGAVRMPDLRRFGENQAKEQLAALGIFNVYVDYQTRDRIPDVYDEYAPYAVVSTLPAPGEWIDPNATVVLGVRAP
>NC_009523.1|WP_011958323.1|4531121_4533032_-|hypothetical-protein
MQTIAPAVLDQQRSQNTVFTRGSLVVAIATLAIIILIHTVPMRVAYDVGSQPAPISRLFDAERSASMSYAYSQGESLILEPMIGIGSYEVRVRMGGPGVRDPLPTTIIVGGEDIAIGEVGVMRVYRFLAPTDARGALAVIVRSTTIQPPGDTRRLGVLFDDLEIRSTGWTLPSMLTLIVAVVAFGSGWMTIALLSDRKAWSVALLAPVSILTGGIAWLLRSQNESLELWLLAGMTMTAFGALVVRPPSWLVRRTLLAAALLVGVWRVALWIVAWAALHTSERLFPLAQHIVSSTDGKVRAPVTFMQVVSTTWSHWDSRLYLSIVTPGYQHPPEEHANMAFLPFYPLLIRALLPLTGGDAVLAGMIVAHCALIAAVLLFADVVARDFGAQVAYRAVATLLCFPTSFFLGAVYAESVALALLALALWGLRRQRWMLAGIAGFFLSLTRLPGVLIAPVLALAVLEHAGWRLLPLTRAYLAPLLPALGIGLFMAYQWQQFGSPLIFLQTQRDIWDQQLSPPWVQLFIMIDTIATGSTHWSGHWPTRAFQLAVWLSFAGLAAVALRRLPLAYSLTAVMMLLPAYLTNVSHSLPRYVLLALPAFLMMALLIERRPALLATIPAALVLLGWTTALFVNGFLVG
>NC_009523.1|WP_011958322.1|4529113_4531111_-|serine/threonine-protein-kinase
MRLEDMVGQTIGRYHVLALLGQGGMAAVYRARDTVLQRDVALKVLYPQFLSDATLVERFRREAVLAARLDHPGIVPIYDIGETDGTAFIAMRLLDGPSLADVLRVRQRLTIDETIALLDQLAAALDYAHANGVIHRDIKPANIILEGLGTLWNRSNPDLLEQVRLTVPTMRAILTDFGIAKALDAPGTTTTGVLIGTPEYMAPEQIRGDVRIDGRADVYALGVLTFRCLTGRSPFEGTTQEVLLGHLEGAIVDPSALDPTIPQPIGAAIRLALARRPADRYRTAGEFVRALRSAARMEAPLRPIASTPRPAPDMVRVAADAPTGIGDVRPPSARHEAPLPPPPPTTGAAVPPRRPLHPALIALLALGALILGGGGAVLAGRLLFAPTPTSTALLVIDTATPTPTFTTTPTATPTPTALPSPTPAPTETPTATPSPTATATPVPPTPTPRPTNTPSATPTSAPTETPTATPSPSPSITPTPSSTPTATNTATPTATLTPTPCPIAPIRGFGEVWNKNPTVARRLGCPTDIERGGSNTLIEQRFESGSMISFLPIGDIYVLIGFTRGEWQRFPYPAPPPPDTPATPTPPAGLQTPVDIFGTVWATNPGVRQNLGFALRPQSATIEGAYQPFTGGVMIYSSEGLGRGKTIYVLYDDGTFERYDDTFTP
>NC_009523.1|WP_011958321.1|4528777_4529092_-|methylated-DNA--protein-cysteine-methyltransferase
MAGYYDDVYAIVCRIPPGRVSTYGRIAAMTAVPRGARGVGWALHALGPAQARHVPWWRVINAAGRISNEYYADLQRALLEAEGVVFNEHGYVDLHRYLWDGKLS
>NC_009523.1|WP_157041155.1|4527696_4528707_-|LacI-family-DNA-binding-transcriptional-regulator
MMRRSTIREVALRAGVSYQTVSRVINNSPDVAEATREHVLRVIAELDYHPNAQAVSLSRNRTDIVGIIVDTVTSTFFAQTIDGVAKALRRRGRFMLLATVEDATQFDVIDTLQRSRRIDGLIIVLPLANSLSLSRLTPSRVPIVHVDLQYDMDVYGITVDNYHGAYLATEHLISLGHRRIGIITGRSDIPVGQLRLDGYTAALRDYGIPFNQALAARGDFSFASGIAGAEQLLALDPRPTAIFACNDLMAIGTLHVAARNGLRIPADLSVIGFDDTPEAALACPPLTTMRQPLHAMGEMAADLVCRLIDGEQPEHMRTTVKTELIVRSSTGRVPND
>NC_009523.1|WP_011958319.1|4526276_4527545_-|PQQ-binding-like-beta-propeller-repeat-protein
MSATGQRSVWMVAVIALLGAIGYVALRPPSQPSPASTPYAPTAVSNVNVPVVPDNPFAPSNPARITPDGAGDWAMEGLNPARTRAVETPIAPPLDQQRVVVAASFEEGVSPPVIARGLILLETKDALSAIDLRTGRQRWAYRQKGAYISPAVAGDTVYFRAEQANQGQLVALELSSGRQRWTFTPKRLSSSTNNYFGGHLTSPVVVDGVVYVGAGKELYALDAVTGKVRWEFSAQDFVTSSAAVADGRVFVSDFSYFYAIDQHTGALIWSYPAYSAVYFSSVATGDMVLISSGQSMIALDAGDGAKRWEKNIPGKALIPAGAQGDIVFVKTTNELFALDRSNGRELWSFRDVNYVSLPALTQQYVFVVNGMGASATVEAIDIATGASVWSQPVPRLATTAPVIAGRAIYVRTTDGRVIELLS
>NC_009523.1|WP_011958318.1|4525204_4526212_-|sugar-ABC-transporter-permease
MAVQTAQVPARHKRKPALFGLIPAGKIERREALWFWIFISPWVIGFLAFTFYPIVMSAYYSMTVFNVASPPVWVGFDNYINLFNDRVYWKSLQVTSYYTLLSVPLGIFFGLMLAVLLNQRVPALGVFRTLYYLPALLGGSVAVALLFSWLLNPQFGAINLIIRTLVGPNGLIPLGITGPRWLQDPNWVIPSFTLMSLWGFGGTMLIYLSALQGVPTALYEAAEIDGANRIQQFFHVTVPMISPVILFTFITGVIGAMQQFTAAYVISGGMNLGAPAYSSMFYNLYLFLNAFRRYRMGLASAQAWILLIVILLLTLAMFWASRRYVHYESDEEGAI
>NC_009523.1|WP_011958317.1|4524256_4525165_-|carbohydrate-ABC-transporter-permease
MATQTTSPNVRPATPLIRRGLWASKRRREQFITFLSTTIVALGLIVILFPLVWMFSTSLKTRAEVAKFPPVWIPAIPQWDNYRAALTGENRFDIYFKNTMIYAGGAALGETLSCALVAYGFARLRAPGKNALFVLVLATMMLPFWVTLIPQYIIFARLGWIDTYLPLLVPKFFGSAYLIFLLRQFYKTLPKDYEEAALIDGAGYFGIWWRIIVPLSLPAVGAVAIMSFMFHYQDFMGPLLYINSQYNYPVSIGLQQFRAPFGGTAFHLLMAASLVTLIPPMVLFFLAQRYFIQGIVVTGVKG
>NC_009523.1|WP_011958327.1|4537133_4539956_-|hypothetical-protein
MKLFLTIKQHSLALTVGALITALVIATLPLPASVQAAGVISGAVFRDFDGDGVRDANEPGVGGITVTAYDPSGASAGVAVSFATLCLGSGNPIPECTALNAPAIGSYTLNATGVGPYRIEFSGWPSHMRPAAQGGGNNTSVQFVPDGNSSNIDFALHNPAEYCQQDPDLVTSCYTNGDPQGGGSTATRSAIVQVPFTPATTGPDENVYLATGQQVGATWGLAYQRSSRTLLASAVVKRHTGFGAGGIGAIYRIDRDRVTAPSVLIDLNAAGYPPGVAVGTSPRAPGDLSINEGDPNRDPAVFDAVGKIGIGGISLSEDEETLWVVNLTARTLLEIRIGVPPVTPTAADITVHPLPTPACRNGEFRPWAVKTYAGQVYVGGVCSGERPYAGKNVDSSDLTAHIYRHDPTGAVGNFTEVFSFPLNYPRGRISNGGVGNRPSAAWLPWIDEWSDIGPPMPLPGDGPFGQTMYPQPMLTSIDFDVDGAIIVALNDRAGMQLGNRNYSPIAADTNEYAGVAAGDLLRVCVNPATPTGYSLENAGVCPGGLVGGSTGNRQGPGNGEFYSRDEYGSAHDEVTIGGMALYYSQRQIIVTAYDALPADQNGPVRSGGLRWFNAANGALTDAYVIFGRDQPIGSPPGTEVRRATFGKSAGLGDLETFCNQAPLEIGNRVWLDRNRNGVQDPDEPPIPGVTVELWRNGVRIGVAVTDAAGTYYFRSGTNSTDDNLQDNIIHDGGIGIRPRTGTPGGASEYEVRIPNITGPNRQPALTNLTLTVNDNDSSPNGDSRDSDGETVGNNAVFVIPYNNHAAAGTNNHTYDFGFFEGVPTAIALMSFTAGWEGDAVMIRWVTAMELDTAGFRLLRSATGRIDDAIIVTPTLIRARGGPGYGATYEWRDTTAQPGAAYTYWLEEVETTGRVNRYGPAMARVQTTSPPYLVTLPLVIR
>NC_009523.1|WP_157041378.1|4539979_4541101_-|cytochrome-c-peroxidase
MLRPKVHAVRLPLAIALGGAALLIVAFVGGIQRLTPGAATPASAGSPRAMIELGRWLFYDRRLSANERIACATCHRQELGFSDGRVVSIGATDVPLRRNTPGLLNSGELTALTWANPQVRTLEHQIARALFAADPPEMGVAGNEQRVIDRLRADPDYRQRFAAAFPADDDPFTWDRVIEALAAFTRSLHGRNTPYDRYIYHGETTALTESARRGMALFFSPGLACGHCHVDLVPPNRAAPPRWSDLAYVATGTGRSADRGLAEHTGAATDAYRFRVPPLRNVAVTAPYMHDGSLPTLDAVIRFYESGGQLDAGSELERRAARHPLVAGFVLSDDERRDLIVFLESLTDADALQSLAFANPFNGPRLSIADPGR
>NC_009523.1|WP_011958329.1|4541342_4541741_+|VOC-family-protein
MRLEHIALNVADPDAMARWYTSHLGMQIVRHIPTPNATYFLADSARMSVIEIYHNPAAPVPDYAAFSPLALHLAFSTSDMEADIARLVAAGATHVAPIDVTPAGDRLTFLRDPWQIAIQLAQRKTPLLQPAS
>NC_009523.1|WP_011958330.1|4542022_4542985_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPLETIPYTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRDSVPGIGAITALNLLLRLPELGTIKRTEAAAVVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFYQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_041334106.1|4543781_4544576_+|CBS-domain-containing-protein
MTAPTEGFARRALALRAMLCDDSASAGDQALKLLEEYLERLTYRYGYVGDGSLGRYANFLRGRDALDEDLIERIDAYTQVRNCLAHSCGLQTSLDLVAGLIEFIEFLLKRSAPTAEELMTRAVRTIDQTESLAHDLLIRSGYGRLPVLSDDRRIVGLLTERDLVATQALAERANRRFADLTVADVLPPDALDRVVCIAPDTPREDVAEALTRSGVIACPVTPGGLPDKAPPGIITHADVLYRMQGCSRGREPRSRVRRRSRTAA
>NC_009523.1|WP_157041380.1|4544481_4545555_-|hypothetical-protein
MMGKRRQTATLRRRRTTASAPPNATRGFLLLAVGVIVLLAVAGAGWWMTRRAEQASQAPTQSSGVIGGVTGCRSIPRFAARLGYADRLGISTSERLYRGLVIFDGRVPVTADPALRDIHQEPSWDDAGTLGPFVIDRDGHIYTAAVPRTAVSDNPPGSLNVIYRIDSDTAELQPFVTLPGAPAGSSDNPFGILGMTYDCDTHALYVSTVAGSTRQSEEGRIVRIDLASREISDEVIGIDAIGLAVFQGRTGKRLYVGLARSADVGSVELDAAGHATGEFRIDLTLDEQVTTFADPRVRRISFDQTNMTLFIVPFTFNLRAVSEQQQVTLRYGYDAERDSWVPFPASIPASDRAHLHG
>NC_009523.1|WP_011958333.1|4545551_4547339_-|hypothetical-protein
MKRVLTIIFLIFLIACGQPAASPPPTSVPQRTPIVRPMTPPADPGRLAPRATPPPSAAPLLAERRAQVEQALARAEPLMLLDGLDAAQQAAWRIAVADERVRQALATADGRLVRSEVFGIYPLGPADDALAGDVCRNRTCYRVELYDYARDRTVLAVVDPQAGRVHRVTSLDDTQPTIVPRHLLDLAAQIALAAPEVRAELGLPPDQQMIQQPQMKVQFQATVCERSRHLCTAPIFVWGERALWVIVDLVDYTIVGLRWTDLGVSSRRPVTEQRLQDDVVTAQYCDRATDVRRDGWSLHYLLTSTDGLRIEDVRFNDRPVLRSAKLVDVHISYSQQEGFGYSDALGCPAFSAAAVVAWDGPQIEPIRAANGVDGFALVQRFRSEFWPTPCNYAYRQRYEFYQDGSFRIVFVSEGRGCGNDGMYRPVMRIALAEDRYTFAEWTGAGWRDWKTEGWQVQRDTTAYTPEGYQYRVTNVSRHGWYIAPGRGQFNDGGRGDNAYLYAVRGDVERDEGESDLPTLGDCCNTDERQGPERFLTPPESLEYAPLVIWYVPQLKNSDTPGAEYCWADSILQDGVFVPRVWPCAAGPLFVPIGGN
>NC_009523.1|WP_157041140.1|4547525_4547663_+|hypothetical-protein
MTVSRGGTTNLVRQGGSARRLATEVAAGRREARLRGREGAHPARP
>NC_009523.1|WP_157040978.1|4547785_4547923_+|hypothetical-protein
MTVSRGGTTNLVRQGGSARRLATEVAAGRREARLRGLAGAHPARP
>NC_009523.1|WP_011958334.1|4548751_4550194_+|polysaccharide-biosynthesis-tyrosine-autokinase
MDTRAFRRLMRRRWRSILAGTIIVGVLTLIVDLLQPPVYQASATLLVNQNRGMTAPSYESVLMSQQLTRTYAELLKKRPLYEGVIASLNLETTPERLMRNVRVSTIRDTQLIVVSVRDRSPQRAAEIANELVRLLREQDRQLLAGAYAGGERGLSVVEPAWPDPVPFSPKIARDVLLGVIFGLLGMFGIAVVREYIDETVKTSDDAARLTNAPVLGVIRGASGAAQRSFAIDDHTPEAYRMLAVHLRTVLHDQRASTLIVTSAEPLEDARTVAAYLAAVSARIGQRVILVDGDLRQPMLHSFFDLAGVPGLKEALECAQSLPVYRYLRPTSFAHLMLLPGGEPTANPMILLDSSRLHDIVAELHQHAELVIMVGPALLAFADTLLLAKTADAALLVVRAESTGAAATVAARAMLDRASIRMAGVVLTGAVDEPLASWSGDPADIGSPVTRQRLGLGTGGKHALRGVAPPTSSTSSRASDA

Crispr_ID: NC_009523_85

• CRISPR_ID: NC_009523_85
• CRISPR_location: 4584105-4584268
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas3

Consensus repeat of NC_009523_85

Consensus_repeat	Method
GAGAGCGCTGACGGTGGTGAGGCGCAAACGGTTGATACGCATATCGATAGCGC	CRISPRCasFinder

spacers of NC_009523_85

>85.1|4584158|58|NC_009523|CRISPRCasFinder
GCCTGTCGATGACGTTTCCACTAAGCAGGCAGCGTCCCCCGAAGCCGCCAGCGAGCCA

CRISPR arrays and Neighbor proteins around NC_009523_85

CRISPR arrays

The CRISPR arrays of NC_009523_85

>merge|NC_009523|85|4584105-4584268|CRISPRCasFinder
GAGAGCGCTGACGGTGGTGAGGCGCAAACGGTTGATACGCATATCGATAGCGCGCCTGTCGATGACGTTTCCACTAAGCAGGCAGCGTCCCCCGAAGCCGCCAGCGAGCCAGAGAGCGCTGACGGTGGTGAGGCGCAAACGGTTGATACGCATATCAATAGCGC

>NC_009523|85|81|4584105-4584268|CRISPRCasFinder
GAGAGCGCTGACGGTGGTGAGGCGCAAACGGTTGATACGCATATCGATAGCGC	GCCTGTCGATGACGTTTCCACTAAGCAGGCAGCGTCCCCCGAAGCCGCCAGCGAGCCA
GAGAGCGCTGACGGTGGTGAGGCGCAAACGGTTGATACGCATATCAATAGCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157041158.1|4593364_4593517_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958355.1|4576061_4576724_-|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|294013
NC_009523.1|WP_011958352.1|4572399_4573365_+|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl|CDD|187570
NC_009523.1|WP_011958361.1|4586393_4587290_+|S-methyl-5'-thioadenosine-phosphorylase	unknown	unknown	gnl|CDD|180977
NC_009523.1|WP_011958368.1|4599417_4600932_+|hypothetical-protein	unknown	unknown	gnl|CDD|376154
NC_009523.1|WP_011958356.1|4576891_4578691_+|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NC_009523.1|WP_157041157.1|4590423_4591125_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009523.1|WP_011958365.1|4592215_4592725_-|MGMT-family-protein	unknown	unknown	gnl|CDD|376440
NC_009523.1|WP_157041382.1|4566947_4568036_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl|CDD|379214
NC_009523.1|WP_011958359.1|4584386_4585046_+|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl|CDD|178955
NC_009523.1|WP_011958357.1|4578721_4582519_-|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl|CDD|224118
NC_009523.1|WP_011958351.1|4570045_4572016_+|polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|224011
NC_009523.1|WP_011958354.1|4574732_4576034_-|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|235037
NC_009523.1|WP_011958353.1|4574141_4574501_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958360.1|4585064_4586375_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl|CDD|235422
NC_009523.1|WP_011958349.1|4568122_4569334_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl|CDD|99740
NC_009523.1|WP_157041156.1|4569342_4570002_+|YdcF-family-protein	unknown	unknown	gnl|CDD|99750
NC_009523.1|WP_011958362.1|4589321_4590395_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NC_009523.1|WP_011958367.1|4594742_4599410_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NC_009523.1|WP_011958364.1|4591090_4591783_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011958357.1|4578721_4582519_-|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	4e-12	40.5	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958355.1|4576061_4576724_-|FHA-domain-containing-protein	gnl|CDD|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	9.48272e-27
NC_009523.1|WP_011958352.1|4572399_4573365_+|GDP-mannose-4,6-dehydratase	gnl|CDD|187570	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs. GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.4281e-115
NC_009523.1|WP_011958361.1|4586393_4587290_+|S-methyl-5'-thioadenosine-phosphorylase	gnl|CDD|180977	PRK07432, PRK07432, S-methyl-5'-thioadenosine phosphorylase.	2.85769e-128
NC_009523.1|WP_011958368.1|4599417_4600932_+|hypothetical-protein	gnl|CDD|376154	pfam18731, HEPN_Swt1, Swt1-like HEPN. Swt1-like HEPN. This HEPN domain might have a role in binding and sensing unspliced pre-mRNAs that are specifically targeted by the Swt1 nuclease at the nuclear envelope.	2.34145e-07
NC_009523.1|WP_011958356.1|4576891_4578691_+|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.12454e-122
NC_009523.1|WP_157041157.1|4590423_4591125_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.44719e-06
NC_009523.1|WP_011958365.1|4592215_4592725_-|MGMT-family-protein	gnl|CDD|376440	pfam01035, DNA_binding_1, 6-O-methylguanine DNA methyltransferase, DNA binding domain. This domain is a 3 helical bundle.	2.02284e-08
NC_009523.1|WP_157041382.1|4566947_4568036_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl|CDD|379214	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions.	1.67362e-09
NC_009523.1|WP_011958359.1|4584386_4585046_+|ATP-dependent-Clp-protease-proteolytic-subunit	gnl|CDD|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	1.89475e-122
NC_009523.1|WP_011958357.1|4578721_4582519_-|transcription-repair-coupling-factor	gnl|CDD|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NC_009523.1|WP_011958351.1|4570045_4572016_+|polysaccharide-biosynthesis-protein	gnl|CDD|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NC_009523.1|WP_011958354.1|4574732_4576034_-|3-phosphoshikimate-1-carboxyvinyltransferase	gnl|CDD|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	3.77666e-179
NC_009523.1|WP_157041156.1|4569342_4570002_+|YdcF-family-protein	gnl|CDD|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	3.49247e-17
NC_009523.1|WP_011958360.1|4585064_4586375_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl|CDD|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
NC_009523.1|WP_011958349.1|4568122_4569334_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl|CDD|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	4.86361e-154
NC_009523.1|WP_011958362.1|4589321_4590395_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.71291e-50
NC_009523.1|WP_011958367.1|4594742_4599410_+|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	2.00564e-10

Protein sequences

>NC_009523.1|WP_011958357.1|4578721_4582519_-|transcription-repair-coupling-factor
MSVTTCATVLAEITAIAPVQDLIATLHAHRGARLHIAPTPGAARTPLVAAFTLQGVAPLLYLVGTTDAALRAHEDLRQWIGTDRVFLFPASDALPYEHMSTGADILTARLRVLHRLAAFNAGDVDVAPFVIVAPVKALMQPSLTPDELRDASVRLERGMAYALDDLIERLIAMGYRYAPTVEEPGEVNRRGGIIDVFSPGDDLPLRIEFFGDEIDSLRRFDPLTQRSEAQIRAAIIGPPHEFPLWRRDVALERMRAIDTSMLRHEALDEWLQAFDHIRNGERFEGRALFAPFFRDNPQAPGTLLHHLPPGAPVVLSEALLLAQHATELDQQAETRRRQQIDAGELPAAFPRPYLRWHELMALAEAHTLVNLSNNEHPFWDVLLSDPAPLPPSFSFGEQNGNPAPLTDTRNVHPSEDRFRVHLLPERLFAPAELFGGQIRRLVDDVVERLRAGERVVLITPQAARLQELVTEALQRDASDGVENVVSGLTVLHGTLDEGFRMPALNLTLYSDTEIFGWRQRRIIADRRRRHDRRAEDRAAFLRGLKPGDYVVHIEHGIAVYEGLIRRSVGGIERDYLNLRYAEGDRLYVPVDQIDRVSRYIGAGDVEPQLTRLGTQDWERAKRKARAAVQDLAEELITLYAQRQLAEGHAFSPDTEWQRELEASFPYVETPDQLKAIIDVKRDMEQPQPMDRLVCGDVGFGKTEVALRAAFKAVQDGKQVAVLAPTTVLVQQHYDTFSRRMAAFPVRIDMISRFRSAKEQSEIVQRLARGEIDIIIGTHRLLSKDVVFKDLGLLVIDEEQRFGVRHKERIKQLRTNVDVLTLTATPIPRTLHMALAGIRDLSIIDTPPEDRIPIKTYVLPYDERLIREAILRELDRGGQVYFVHNRVQSIYYVADRLRRLVPEARIAVGHGQLEEHQLERVMLDFFTGRDDVLVCTTIIESGLDVPNANTIIIDDATNFGLAQLYQLRGRVGRSTQRAYAYLFYKSERPSTPEAQERLRAIQEATELGAGFRIAMRDLEIRGAGNLLGAEQSGHIAAVGFDLYSRLLEQAVRTLKQRLIATNFITGTDAMRTSPGAPAQPSDGQTPPPARSSVPSRRPAVRVDEKVLISPLVTLDLPLDAYLPVDYIPDDRVRLAVYQRMAEAQTPEAVRDLRQELRDRFGELPEPADQLLIWLRIKALALAAGVTSVVTTDAEFIIRLPEGNDQARSRLERRFARARGIRIGPQFVRLDRRVHNAGGDPAWIEVMCDVLAVLGEGKTVEGQGVER
>NC_009523.1|WP_011958356.1|4576891_4578691_+|serine/threonine-protein-kinase
MTRLIGQHLGRYLVQEEIGRGGMARVYRAFDTSLKRTVALKVLAPHLALDPEFERRFEREAITVANLRHPNIVTVYDIGEANGLRYIAMEYVRGRTLHAIIRERGALGLAIAISIIAPVADALDHAHAQGAVHRDVKPHNILIDIEGRVLLTDFGIAQAPDGERLTRTGIFMGTPEYISPEQASAQRVDGRSDLYSLAIVTYEMITGVVPFSGATPQLIMAHVQSPPPPPSSIAPQEPPELDLVLARALAKRPEQRFGSGAAFVEALRIVARRHNVAPALQQEIADLALPRAVPHRAAPSSATINGPAVRPVSGRVDQVVSLRGDQTPIGAPPQRPPLRFTPDRGVSSGTSLRPLPEQRGIRWSIVAPMSAGVIVVALIAALFGAGVFGASGQAQPAPPPVTVMLTETPPLPPTWTPAPSPTFTPTPAPTDTPTPEPPTPVPPTQAPVFVPPPPPPPPPPPPPTATPEPPTETPTETPTDTPEPPTATPTQATPSATGTPEATSTVTATAGTATPTATPGATATPTPGATTTPGSDLTPTVTVTPTSGVTPTVTTGSATTGTPPADVTASPTPSSTPEASPTVPSPSPEASPTASPPPG
>NC_009523.1|WP_011958355.1|4576061_4576724_-|FHA-domain-containing-protein
MQSGPVPILVIRRQDAATIQIEWDRPILTLGRDPANDIVIDHPLASRRHARLERDESGYLIRDLDSTNGTYVNGERIEGVQTLHNQDRIWIADAEIVFNDPEATQKGPLPLEILKRVRSHEEALRVDSRAKEVYIHGKLLDPPLTVKEFQLLELLYTHKGQVLSKDEIARNVWDYEVYDYNAIDALVYRLRQRIESDPGNPRFVVTVRGFGYKLVTQPDQ
>NC_009523.1|WP_011958354.1|4574732_4576034_-|3-phosphoshikimate-1-carboxyvinyltransferase
MMIYSITPPHRLRGIIDLPGDKSISHRAILLNAVAAGSAEITNFLTGADCLSTIACVQALGVHIERQGTTVRVDGAGLRGLREPVDVLDCGNSGTTLRLLAGMIAGQEGMFAVLTGDSSLRSRPQQRIVAPLRALGASLDGRQQGNCAPLAVRGAHLHGGAYELPIASAQVKSALLLAALFGDAPLTLTGRTDGRDHTERMLAAMGVEITVNTPVIRLTPPAHSDALRPLSLRAPGDPSSAAFWWVAAAIHPDAELTTTGVCLNPTRTGALDALRAMGAQIEVTNQRIEGSEPVGDVTVRSSQLRGITIEGALIPRLIDELPVLALAAACAEGETIIRDAQELRVKETDRIATAASGLTALGATVEPTSDGMVISGGARLRGASLDSHGDHRLAMTWAIAGLVASGETTLRGAGAVDVSYPEFWGVLARVAER
>NC_009523.1|WP_011958353.1|4574141_4574501_-|hypothetical-protein
MLVATLTEAPPPPDYPLEEQRREVVPLTVMFFTTAFVVRGTCYVRPGLTLTEALERLMEDFLPLRSVQIFPIAGGTPIPRDFAALARDKIVAFYQIAALPTPAPPAAAEPEEPVSAPQG
>NC_009523.1|WP_011958352.1|4572399_4573365_+|GDP-mannose-4,6-dehydratase
MRVFITGITGPVGSALADYLVTLPGVEVHAFKRWRSDTRPIAHLLGRITVHEGDIEDPYSVARAVERAAPERVYHLAAQSYPSESWDAPVVTMRTNVEGTINLLEAVRRYAPRARVHIAGTSAEYGWVRPEETPIRETHPTRPLSPYGVSKVAAGLSGLQYAANYGLHVVVTRSFNHVGPHQGDRCAIQTFCRQMALIEHDRQEPVIYVGNLEARRDFTHTRDVAHALWLLLDHSVSGEIYNLCSGVATRIGDIVALVQRSGRVATEVRIDPSRLRPSDEPLLVGDNTKLRQATGWAPQIDVPMMVEELMAYWRERIATGG
>NC_009523.1|WP_011958351.1|4570045_4572016_+|polysaccharide-biosynthesis-protein
MSRSLPAGHLCTIDVLMLTIAAFASYALRLERLDLGEHWRSFVLFAGAAPVVVLMLFGMTRVYAQYWRYASFHEFSLLAWALVCAGIVLEGMVLIGRALFPAIPVVPLSIPPIFVLSALTLTALPRLMMHARFQPSPRRWHRQSGNRALIMGAGEAGAMIVQSMRLARQNNVIVGFVDDNPHKRGVRINGAPVLGDRHDIPRLAAEYQINEVIIAMPSAPGKTIREIVAICERAGVRARIIPGIAELVDGRFSVNHIRDVQIEDLLRRAPIQTDMQAVGRLIRGRRVLVTGGGGSIGSEICRHVLRYEPSDLIILGHGENSVFAIHNELYRWLNTPRGESDSVDGDGQCRSYRTPTLHTVIADIRFSERIHAVFERYRPEIVFHAAAHKHVPLMEANPVEAVTNNVLGTRNLLDAAIVTGVERFVMISTDKAVNPTSIMGSSKRAAELLVHHAAKVSGRAFMAVRFGNVLGSRGSVVWTFKQQIAAGGPVTVTHPEMRRYFMTIPEAVQLVLQAAALGRGGEVFTLDMGEPVKILDLARDMIELSGLQVGRDIDIAFVGLRPGEKLFEELFLPGEQYDRTSHEKIFIARNASRLVPADVLALIADLEEAALSDDTSRTVRLLRLIVQRSQSTPHEDVHGDHTLEPASLRALAVGGS
>NC_009523.1|WP_157041156.1|4569342_4570002_+|YdcF-family-protein
MTDQKRISQLRIITRLQWSHRSARLGYAMLLTIAALTVSAGWWLPALGGLLALEGRPAHADAIVVLGGGFPLRDQHAIDLYREGWAREIWRTGDLPGGSVVLQKARRLALQQGVPETAFVPVATDSTWADGREIARMAQERHAQRLLIVTEWPHSRRAMCVINRHLAGTGVVAFYDGPRHPPYTPSNWWRDPEGRRIVSGEMLKTIYYLLRFGVTPWAC
>NC_009523.1|WP_011958349.1|4568122_4569334_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MDRVPMSSPDVTDAEREVVMKALHTPVLSIGPYVQQFEQRLSAFVGARYGVAVNSGTSGLHLSVIAAGVTEYDLVVTTPFSFIASANCILYERGIPIFVDVDPLTGNIDPEQVHAAISDLSRGGMAARRWLPPALRNGRYGRVKAILAVHAFGQPADMTPIVALARRRNLVVIEDACEALGSEYRGHPAGTLGDLAVFAFYPNKQITTGEGGMIVTNNEEWAVLLRSLRNQGRDVFDAWLNHTRLGFNYRLDELSAALGCVQMQRIHELLAKRARVAAWYNERLADLELVERPLISDTTTVMSWFVYVVRIKPPARRDGVMRLLAASGIPSRPYFTPIHLQPFYRKRFGFRRGDFPVTERLGDTSLALPFSSVMTESQVDMVCEQLRRSLVQSIQSEDTVGVA
>NC_009523.1|WP_157041382.1|4566947_4568036_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MQEQLFTIEDRDAWEEAMPTHISVFGSIGYACIVQRHIGYPARLFVVSSGTGRIVYPFFLRPVANLPFAQQYAPFWDTLTPEYTGPMAWGEVTPLLRYFFDERWNRFCEEQGVVAEFAHLHPSERAADLLDSAHVQFNREIVVVDLTLPEENLWRHSFSLSCRKNIQRAHRDQVRVVEGRTDADVREFHRIYTMTMERRQAHKRYFFSLDYFLAFRDELPDNTLFLFAVYRDRAIAAHLYLYDDEEMHDFLGGMEEEHKRLRPANAVIYAAIQWGRRRGKRRLILGGGYQQNDGIYQFKASFSPLRARFSTYRRVRHPTLYADLCQAWTEYYGCALPQDATYFPAYRMIPPQDAGLAREVGG
>NC_009523.1|WP_011958359.1|4584386_4585046_+|ATP-dependent-Clp-protease-proteolytic-subunit
MGIWQTNHRIDWTSPRVDALIPMVVESTNRGERAYDIYSRLLKERVILLGTPIDDQIANLIVAQLLFLEHEDPDRDIWLYINSPGGSITAGLAIYDTMQVIRPDVATVCVGMAGSMATPILAGGAKGKRYSLPHSTIHMHPAGGGARGYAPDVEIMARELLREQQLIRELLAKDTGQPLERIARDFDRDLFMDPQQAKEYGIIDEILTREDLPAAGERR
>NC_009523.1|WP_011958360.1|4585064_4586375_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MSRTRSGNANSSNNRGAYLCSFCGRGQEEVQRLIAGPGNVFICDECVALCSAIIAEETGTRPSTRRSSASLPARLPTPRRLREWLDQYVIGQDRAKVVLSVAVYNHYKRLRAGQNADDVEIGKSNILLIGPTGSGKTLLAQTLARVLDVPFAIADATALTEAGYVGEDVENILLRLIQAAEGDIERAQTGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGCVAHVPPVPGRKHPQQEYISFDTTHVLFICGGAFEGLDKIISQRIGGKRSIGFHAGESSDAPASLLSQVTPDDLLRYGFIPEFVGRLPVVAALDPLDKQAMIRILTEPRNAIIKQYQKMLALDHVELEVTPDALEAIAERALRSKTGARALRTIVEEILLDVMYEVPSQEHIGRCIINAEVVEGRGHPILVPRSAERQEYRRRMDEAV
>NC_009523.1|WP_011958361.1|4586393_4587290_+|S-methyl-5'-thioadenosine-phosphorylase
MTAPQPTEPRATIGVIGGSGLYAMEGLADVERVTLETPFGAPSDAYVIGTIAGRRVAFLPRHGVGHRFSPSEVPNRANIYGFRMLGVRYLIAVSAVGSLREEYAPGHIVIPDQLYDRTKGHRPDTFFGGGLVVHVQFDRPFDAGLSDRLEQAARAAGATVHRGGTLVVMEGPQFSTLAESEENRRRGHDLIGMTALPEAKLAREAEIAYAMLAMVTDYDCWHPGHDAVTVEMVVQVLRANARLAQDVVQRVIPLIGDGFDSPAHRALATAIITDPAVVPPEKLAQVELLVGQYMRRDA
>NC_009523.1|WP_011958362.1|4589321_4590395_-|serine-hydrolase
MTDKTRKLQSLLTAQVGKGGLHNIVAAVQSFDRRLDFVGAAGVADPGSGAMMQPDTPYFIASITKMYTAAIIMQLYEQQRLDLAAPVSDYLPADLLDGIHNYKGADYSRQIKVFQLVNQTSGLADFETDKPRGGKSVLEELIAGHDRAIDTAEALTITRRLAPHFPPGTPGKAYYSNLNYRLLGEIIEALTGKPMTVNFEERICAPLGLQHTYLYDWTKPRPGKPPATLYLNNAPVNVTKYLSSNVSDGGLVSTAAECMTFLRAFFEGRLFDQTLLQRMTQWNALFFPLRYGYGLMYYQLPRYFWITPLPEFVGHSGSTGSFAFACPSRSLYITGTLNVIAPARPFFFMMDLVRTAR
>NC_009523.1|WP_157041157.1|4590423_4591125_-|CPBP-family-intramembrane-metalloprotease
MPWKSSTHCKNKTLNMRRQISSASLLFGLPFLILPVMVGIFTLFAHWLGDQAGYLLGFGFYWLLWCLMIPRILLGKAEFATILHDRAPLFSRANWPAALLWLTVTLVAVFMYTGEFVRAPPILILIAVPLATLNGCCEEILWRGLYVRCFPHNPWLAILYPAVGFALWHVAPQMIFPAENMFGFVLSTFFLALPYGYIAWRTGSARWTAISHSLSEILALSGSLAPTMLALFP
>NC_009523.1|WP_011958364.1|4591090_4591783_-|hypothetical-protein
MDLTAILFLIGFIVVFGWFLYTFTQSSRKEKETKQLLTQSLGFSSFEADRSLAGKISSLYQRPGSKNNYQLRHVSRRLIPDGTMFLFDLVDRSGNDDSWVERQAVAIISPSLKLPPFALFPKSNPKYALSGLANQVVEWGMSKIGEPVAFPQYPALGERYVVTSQDPEGLRVFMDDSLARFFGQTEMYTIHAAGDMFTFAEIDPNFKTADIQSMTRRVNRAMEIFHALQK
>NC_009523.1|WP_011958365.1|4592215_4592725_-|MGMT-family-protein
MASRRKTWQEKMADKEGLPKILPLEERFPCYNALHSIGVEAGDPVVLVNSGEVVALMRQMPYGHLTTIIEICQALARHYQVRGCCTLTTGIVIMTAANAAVEAGGAPPELDIPYWRTLKADGFLNEKFPGGAEAHRALLEQEGFTIARKGRRYVVADYRRYLFTDFSFS
>NC_009523.1|WP_157041158.1|4593364_4593517_-|hypothetical-protein
MRAYDSEFAMNRTQLNISRFIIDTLPVKMATLLFVSGDESVVTAGDHARA
>NC_009523.1|WP_011958367.1|4594742_4599410_+|tetratricopeptide-repeat-protein
MLSQIIQRQIPIGSTVIFSLKDGQDVSGILVEIGRDHVTLENAGYSVTILLEMIGTWRVSRSLEPLEHTPMPEPSSASPPPLSPPDLADQETIKRLLEIEARFQVRQQVSFIQIKVPDFVFPANEMQGKQSANALTIWNRVKNKYEYAEKINELSAKFGRIQSLVGELASLSEQFPRSSSVKRHLAYFYHLAGDNQKSLALYQESASISNNALDWYNLAAKALAKGDEALACYCFGNFFKVNPITDELDTWYIYAGLIRKFSDYQTIKEIARKRVKIASKDEIVLLLETGIYLLTATGRGQIATNTVQRWIKDHALEDLVIEVFDHFQEQKDAAYHERVSGFLEEKSPESVQMSLDNPQGFIFSYRRDRNFGFLEGKDGRNYFFHITAVSDDDLLAQLRDFTSGKRIPVIFESSEGQKGPIAVRVALYRTLEEMFAKAVEYANDGDYSKAIAFVKKVLDARPNFPSAQDSYEKWREYARVSGIPKGSNPYARAKRVQLVEKDLERAAQLLRDAIRQGDNVESAVKDLAALLVQLGRPDEAIQVLEKNRSRISNQQSVDNMLINFYQNAGQHDKAISLLHKQLQQANTETKKAQILWQIAIGYLRKEDYVRAEQTFQELRRAQPDNKSIQRNIALCLFKQERYEEARKILDGILLTTPDPQAAELLEAIRQAQVGQVISINEIIVETALSDIPREISGFARFYLDRCDYQGVRADHIQTKSFDRSDISTLEQLATRSRTIRPRERASYYLSAAKITSLLEDEDPNQFYKYLCRSFASSGDAIVVENRPLDAAREYYCEALSVYDGDRSRSRDEQDAVNALVRFLFSTMGQSQIPIKPSIPTIDETLEFVLTRHPDRNKAFDAIAYLVFRSRYAANRLLNRIYDKSSLQAMALEYLKSAGVSIGIVKRFDDFFRLWNGLVRKILDENRSLLNEFRILNRVELTTASLEHGVERIKKITGRLFFELDRQRVIQIQKVLETALELCNQNAFEEKERLCIQIENRCQDLLNEIEISPTKISVEDMYPLVKGIQSKINAYLTQLYETSTPQLTIRLPLETYMPGNNRLIEAQVGISNRVGCSPAEAVELVIQQYEETSAIRLEGSLRGGEQRILKVPVQLSEEALSAQAFSLPIYARYRTRSGETQQTPVNNFSIRLSAEFEEIENPYTPYAEGGIVGESAMFYGRDELIANVSNALDTSRAQSKCVVIYGQKRAGKSSILYHLQEKLKLKEDLLVVNIGNIGGILDEFSRIPFLYHILWTILSKLRDSLEDKLSEGRSSPDVSFPSGMEFYQHQSPLLLFRETFDRFHRSIEKLPDWRGTRVILLIDEFSYIYGYILKGMIPETFMKNWKAMLQDNFFNAVLVGQDVMPKFKQRFPNEFGTTQDERVTYLRREDAIRLIDEPIRIGGRHGESRYRERAIERILELTAGSPFYIQILCNRLVEYMNRKRASLVTEADVEQVKDELIRGVNALGKDKFDNLINSGDTSQDAISDEDALKVLTAIAENSRTGPCSRSSIACETSIPVDEILEDLVRRDVIERERGHYYSIRVGLFREWLLAHS
>NC_009523.1|WP_011958368.1|4599417_4600932_+|hypothetical-protein
MSERDFINPFSDYGHIVHGDRFIDRCSSIRAVENRVIRPKEPGNLAIIGDYRIGKSSLAYQSIMERKNDLLKERRLPVWINLATFDQPSLFFRALVTSSYDELDNLGWLSNDIKNAAARALQDEVSWSEGYGRIQRYFEKVRRSGIRILFILDEFDHARKLFKGDVSGFQGLRELSYRPEWRVTFVTTSRRSLQSIELQTAAISTLDHTFHKHYLGMFDEDALEEYFKRLSSIGITITPQVRERLFFYCDGHPYLLEMLGYEVVELFRETGIVDVDQATKDVGQSFIDHYEHTLEVLKEDEKLNKMLQILFGPVIDAKLTDAEELQRYGLIKLNDEDVYVAFSEHFQTYLRIIERYVDLWPLWRETEMALRRVITEKMIEHYGEQWIERLCKEKPKIRTIFEKSEEAQKQEERSFGDRASRNLVDFMYPRGLFDIIFAEWSVFRDVFGKDKNYWDQRAQLLSKVRNPLAHNRDMALYDYERRIAEGYCGEILTALEKYRSASNA

Crispr_ID: NC_009523_86

• CRISPR_ID: NC_009523_86
• CRISPR_location: 4629109-4629197
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_86

Consensus_repeat	Method
GGATGTCCCGCACGTCCACGGAACGGCT	CRISPRCasFinder

spacers of NC_009523_86

>86.1|4629137|33|NC_009523|CRISPRCasFinder
GTCTGGCGCGTGAACGGCAAATACGCGGGCAGT

CRISPR arrays and Neighbor proteins around NC_009523_86

CRISPR arrays

The CRISPR arrays of NC_009523_86

>merge|NC_009523|86|4629109-4629197|CRISPRCasFinder
GGATGTCCCGCACGTCCACGGAACGGCTGTCTGGCGCGTGAACGGCAAATACGCGGGCAGTGGATGGCCCGCACGTCCACGGAACGGCT

>NC_009523|86|82|4629109-4629197|CRISPRCasFinder
GGATGTCCCGCACGTCCACGGAACGGCT	GTCTGGCGCGTGAACGGCAAATACGCGGGCAGT
GGATGGCCCGCACGTCCACGGAACGGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958393.1|4622342_4623248_+|sugar-kinase	unknown	unknown	gnl|CDD|238571
NC_009523.1|WP_157041160.1|4640623_4641124_-|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl|CDD|367862
NC_009523.1|WP_011958395.1|4623837_4625085_-|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|179997
NC_009523.1|WP_011958401.1|4633731_4635744_-|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl|CDD|235395
NC_009523.1|WP_011958388.1|4616889_4617831_-|hypothetical-protein	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_011958391.1|4620107_4620452_-|OadG-family-protein	unknown	unknown	gnl|CDD|377277
NC_009523.1|WP_011958408.1|4645406_4647200_-|cellulase-family-glycosylhydrolase	unknown	unknown	gnl|CDD|214750
NC_009523.1|WP_011958406.1|4643247_4644240_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958400.1|4631877_4633602_-|NAD-dependent-malic-enzyme	unknown	unknown	gnl|CDD|237414
NC_009523.1|WP_157041384.1|4619649_4620108_-|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	unknown	unknown	gnl|CDD|133459
NC_009523.1|WP_083763379.1|4620590_4622093_-|methylmalonyl-CoA-carboxyltransferase	unknown	unknown	gnl|CDD|227136
NC_009523.1|WP_011958394.1|4623294_4623819_-|PH-domain-containing-protein	unknown	unknown	gnl|CDD|367615
NC_009523.1|WP_011958407.1|4644334_4645333_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958397.1|4626518_4627295_-|histidinol-phosphatase	unknown	unknown	gnl|CDD|238819
NC_009523.1|WP_011958396.1|4625093_4626347_-|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|179997
NC_009523.1|WP_011958399.1|4630800_4631763_+|IS110-like-element-ISRfsp2-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_157041161.1|4641232_4642195_+|glycine-cleavage-system-protein-T	unknown	unknown	gnl|CDD|223481
NC_009523.1|WP_011958389.1|4618503_4619634_-|sodium-ion-translocating-decarboxylase-subunit-beta	unknown	unknown	gnl|CDD|377182
NC_009523.1|WP_011958402.1|4637359_4640617_+|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl|CDD|235444
NC_009523.1|WP_011958405.1|4642220_4643180_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958393.1|4622342_4623248_+|sugar-kinase	gnl|CDD|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	2.37539e-105
NC_009523.1|WP_157041160.1|4640623_4641124_-|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl|CDD|367862	pfam04191, PEMT, Phospholipid methyltransferase. The S. cerevisiae phospholipid methyltransferase (EC:2.1.1.16) has a broad substrate specificity of unsaturated phospholipids.	1.61382e-18
NC_009523.1|WP_011958395.1|4623837_4625085_-|glucose-1-phosphate-adenylyltransferase	gnl|CDD|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	1.48594e-167
NC_009523.1|WP_011958401.1|4633731_4635744_-|excinuclease-ABC-subunit-UvrB	gnl|CDD|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NC_009523.1|WP_011958388.1|4616889_4617831_-|hypothetical-protein	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	0.000153425
NC_009523.1|WP_011958391.1|4620107_4620452_-|OadG-family-protein	gnl|CDD|377277	pfam04277, OAD_gamma, Oxaloacetate decarboxylase, gamma chain.	8.20086e-07
NC_009523.1|WP_011958408.1|4645406_4647200_-|cellulase-family-glycosylhydrolase	gnl|CDD|214750	smart00633, Glyco_10, Glycosyl hydrolase family 10.	0.00137413
NC_009523.1|WP_011958406.1|4643247_4644240_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.03926e-16
NC_009523.1|WP_011958400.1|4631877_4633602_-|NAD-dependent-malic-enzyme	gnl|CDD|237414	PRK13529, PRK13529, oxaloacetate-decarboxylating malate dehydrogenase.	0
NC_009523.1|WP_157041384.1|4619649_4620108_-|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit	gnl|CDD|133459	cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine.	4.68715e-24
NC_009523.1|WP_083763379.1|4620590_4622093_-|methylmalonyl-CoA-carboxyltransferase	gnl|CDD|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NC_009523.1|WP_011958394.1|4623294_4623819_-|PH-domain-containing-protein	gnl|CDD|367615	pfam03703, bPH_2, Bacterial PH domain. Domain found in uncharacterized family of membrane proteins. 1-3 copies found in each protein, with each copy flanked by transmembrane helices. Members of this family have a PH domain like structure.	2.04853e-14
NC_009523.1|WP_011958407.1|4644334_4645333_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.96375e-16
NC_009523.1|WP_011958397.1|4626518_4627295_-|histidinol-phosphatase	gnl|CDD|238819	cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate fructose-1,6-bisphosphate, inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or similar substrates.	2.1499e-100
NC_009523.1|WP_011958396.1|4625093_4626347_-|glucose-1-phosphate-adenylyltransferase	gnl|CDD|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NC_009523.1|WP_011958399.1|4630800_4631763_+|IS110-like-element-ISRfsp2-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.41607e-21
NC_009523.1|WP_157041161.1|4641232_4642195_+|glycine-cleavage-system-protein-T	gnl|CDD|223481	COG0404, GcvT, Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism].	1.16251e-49
NC_009523.1|WP_011958389.1|4618503_4619634_-|sodium-ion-translocating-decarboxylase-subunit-beta	gnl|CDD|377182	pfam03977, OAD_beta, Na+-transporting oxaloacetate decarboxylase beta subunit. Members of this family are integral membrane proteins. The decarboxylation reactions they catalyze are coupled to the vectorial transport of Na+ across the cytoplasmic membrane, thereby creating a sodium ion motive force that is used for ATP synthesis.	2.0569e-180
NC_009523.1|WP_011958402.1|4637359_4640617_+|DNA-mismatch-repair-protein-MutS	gnl|CDD|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NC_009523.1|WP_011958405.1|4642220_4643180_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.24763e-16

Protein sequences

>NC_009523.1|WP_011958397.1|4626518_4627295_-|histidinol-phosphatase
MASETLDALREFAADLAWHAGRLTLRYFQTGLTPDIKDDQTPVTVADREAERLMRRMIEDRYPHHSILGEEEGETRPGASHRWILDPIDGTKSFVQGVPLYGVLVGLERDGESVVGAVSFPALGDFLTAAKGQGCLWNGRRARVSPVSELRQATLLSSDAESMAPHGRESAYRRLAGSVRLVRTWGDAYGYSLVATGRAEIMIDPVMSVWDCAALFPIVTEAGGTFTDWNGIPTIHAGEAIGTNSVLLEQVLQAIRQG
>NC_009523.1|WP_011958396.1|4625093_4626347_-|glucose-1-phosphate-adenylyltransferase
MRVVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKFRIIDFTLSNCVNSGIFDVAVLTQYRPHSLNAHIGNGKPWDLDRANGGVQLLQPYQGRRDESWYKGTADAVYQNLNYIHERRADLVLILSGDHIYKMNYAEMIEFHQQKRADMTVAVMHVPLEETDRFGIMTVDENQRVIEFTEKPKNRDKGTLASMGIYLFNVDTLVKRLSENGEGSPRIDFGKHVIPAMIGRDAVYAFPFQGYWVDVGTIQSYWETSMDLLNPNNTLNLYDTEWVIHTRSEERPPAKMGPQARVSRSLICNGCIIRGTVEHSVLSPGVYVSPGAVVRDSVVMNDTWIGPGAVLDRVIVDKNVVVGAGVRLGCGDDFTTPNREQPDKLMTGITIVGKGAHIPPHIRIGRNVIINADREEEDFPAGDVKSGETI
>NC_009523.1|WP_011958395.1|4623837_4625085_-|glucose-1-phosphate-adenylyltransferase
MLRTYAMILAGGESPALSVLTAERSEAAVPFAGKYRIIDFTLSNCVNSGIYNVGVLTQYRPRSLHEHIGVGKPWDLDRRIGGVRVLHPYLTSEGGAWQRGNADALRANLDIIAEQKVDAVLVLAGDHVYKMDYRPMLQLHEDLDADLTLAVHSVSPHEAHRYGIVSVDADGIVTQFEEKPRRPRSSLASMGIYVFRKNFLMEVLASGDEQNIGRDLMPKLVHQTSVVSYHFQGYWADVGTVQAYYEANMALLVETPALDLHDPEWVIHTKSEERPAAEIGENARVDGNLLCDGCRIYGTVARSIIAPGVVVAEGATVRDSILLSGAVVEAGAVVDRCIVDKEVVIGSNTIVGDGEDNTPNQRAPELLNTGLTLVGRSAQIPANVRIGRNVVIRPRVTAASFGGQTVVSSGATINR
>NC_009523.1|WP_011958394.1|4623294_4623819_-|PH-domain-containing-protein
MTLEQNRARVVAAVWQAIAQSGVDLSSVPRDQQDRLVAAIADTLLPTVNQMLDEVAPRVSAEVSGEERVLWEGRPFLSITERYVLTTERVRIYRGLIGRNIDDIELVRLQDIDFTQNAGERIFGIGDIHLRGADPSTPEVTLRNVHQPEEVRELIRRAWLDARKRYGVSFREQM
>NC_009523.1|WP_011958393.1|4622342_4623248_+|sugar-kinase
MSDVVTLGECMAVLYPPDPVSLDEARTLLIDIGGAEANLAIALCRLGHSARFISRVGDDPFGRRVRAVLSTEGVDTSALLIDPEAPTGVFFREWLADGARRVYYYRRNSAASRITPDDLTPAQFNGARIVHLTGITPALSASCAAACERAIELARAAGALISFDPNFRPRLWSASQARDTLLPLMRAADILLIGHEDAQALLEVDNDDDALMAAAALGAQVVVLKCAERGARALANGQHVTTPAYPVRQVVDPVGAGDGFDAGFLAGWLRGWSMSDSLALGARIGAAAVETLGDYVGYPRV
>NC_009523.1|WP_083763379.1|4620590_4622093_-|methylmalonyl-CoA-carboxyltransferase
MRERARQGGGPERIARHHARGKLTARERLDLLLDPGSFQELEPYTTGRPVDGETFYGDGVVTGAGRIDGRTVFVYSQDFTVLGGSLGEAQARKICRVMDLAFSEGAPIIGLIDSGGARIQEGVHSLGGYGEIFRRNTRCSGVVPQISVMLGPCAGGAAYSPAVTDLIIMVERRSFMFITGPDVIKEVTGEIIDLEGLGGANVHMTISGTCHLTAPDDQTALALCRRALSYLPSNNTENPPVLPNDDDPLRADEELNRIIPLDPGRAYRMHDVIERVVDRGSWLELQPMWAMNAITGWARMGGRSVGIVAQEPGVMAGVIDIDASDKIARFVRTCDCFNIPLVTFVDSPGFLPGIDQEHRGIIRHGAKVLYAYAEATVPKISIVTRKAYGGAYIVMSSKPLGGDINFAWPSAEVAVMGADGAVNLLYRDQIARAPDPAAERARLAREYERKFNNPYHAAAAGFFDDVIEPRETRARVIAALDALRNKSVAPPPRRHGNMPV
>NC_009523.1|WP_011958391.1|4620107_4620452_-|OadG-family-protein
MIDNLNVALQILALGMSITFGALFLLWGLMALLTFLTSGGAGEETTAAPSVEAGVSLPDQEAMRERRRRAAAAAVAVALAREQMVRSSVSPTSAVSPWQAATRMVRFGRPGREP
>NC_009523.1|WP_157041384.1|4619649_4620108_-|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein-subunit
MKVRVVIEGTAYDVEIVDLSARPVIAIVEGERFEVWPEASPVLAIGSLDGGRLPPSVPPPAPVTSTPTPASMPARSGSPESGAVLAPIPGIIVAVKVQPGDRVTAGQEVCVLEAMKMQNSIRAKQSGVVAMVHVKAGDQVKHHQALLVITPD
>NC_009523.1|WP_011958389.1|4618503_4619634_-|sodium-ion-translocating-decarboxylase-subunit-beta
MDFSTLIPELTKGLANFTPGNLVMIAVAATLIALAVVKQYEPVLLLPIGFGCLVANIPLTGMTDGEGLFGILYRAGISTELFPLLIFVGVGAMIDFSPLLAMPRMALLGAAGQFGIFGTLILAMLLGFPLNQAASIGVIGAIDGPTSIYVASQLAPELLAPIAVAAYSYMSLVPIIQPPLMRLLTSRRERIIRMAYAPRPVSRRALVLFPIVVTLTIGMLVPAATPLISMLMLGNLLRESGVVDRLSKAAQNEIINIATLFLGLTIGSTMSADSFLNLVTLQVLGLGLLAFILDTVAGLLFGKFLALVSGGAINPLIGAAGISAFPMAGRLAAKVALDEDADNFILMHAMGANTAGQLGSVVAGGVLLALVTGVLG
>NC_009523.1|WP_011958388.1|4616889_4617831_-|hypothetical-protein
MIPHKPGLSCHLTHKANLRQTRYGWLRLTPAYSVHLVQEILSHIAPQDAIVLDPFCGTGTTALVCAEKGITVDTTDINPFLLWLTKVKTAPYSSEDIAELQSAAQIISESITLSNSAGVWIPPIHQIERWWDSDVLQIIGNMMGMINKMGEIYPEKVIDLLKIAFCRVIITHSSASFDHQSMSFKQKINAPLFYDVADEVRATWEVAVSEIVSSARSDIRATPGIFLCDARDLSALLPHHYYTCVITSPPYPNRMSYIRELRPYMYWLSYLRDGREAGELDWKAIGGTWGIATSRVGKWSPSEGDQKTGFVVS
>NC_009523.1|WP_011958399.1|4630800_4631763_+|IS110-like-element-ISRfsp2-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTINRTEAAAFVGVAPYANQSGAQHKPRHSSGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011958400.1|4631877_4633602_-|NAD-dependent-malic-enzyme
MIRIRFADEGRTVETDRTGHDVLNTPVLNKGSAWSEEERIGLGLLGLLPYHISTIDEQLARVYRNYQQRTNDLDRYLYLTDLQDRNETLFYRLLLEHITEMMPIIYTPEVGVACQRYSHLFHRPRGLFISYPHRDQIETMLRAWPFADQVRVIVVTDGERILGLGDQGMGGIGIPIGKLTLYSLCAGIHPATTLPIVLDVGTNNPALLNDPLYLGWRHERVRGREYDDFIEQFVTAVEKVFPHALLQWEDFAKDNARNLLDRYRDRILSFNDDIQGTGAVTLAGWLAAVEISGVPLADQRIVMLGAGSAATGIAEQIVAVMVEAGIPLEQARRTIWLIDSRDLVHTRRTGLEAVKMLYAQPYEMLEGWTREGSEAFTLYDVVSNVRPTCLIGTSAQPGAFDERTIREMARHVERPVIFPLSNPTSKSEAVPADLIAWTEGRALVATGSPFEPVTYGGRTFTIGQCNNVFIFPGVGLGVIAVGAKRVTDAMFIAAARALSAFSPARQDPTASLYPSLTQVRDVSRAVAQAVAAEAVRSGLAAPLSAEEQTARINATMWTPAYPQVRRMEEHTVHH
>NC_009523.1|WP_011958401.1|4633731_4635744_-|excinuclease-ABC-subunit-UvrB
MSFRIEAPFQPAGDQPKAIAQLVAGIRAGYKHQTLLGATGTGKTLTMAHVFSQLERPALVMAHNKTLVSQLYAEFRELLPDAAVEMFISYYDIYTPEAYVPSKDLYIEKEAEINEEIDRLRHAATQALFTRRDVLIVASVSAIYGLGSPHEYGQVVIPIRVGEVRNRDKLLRQLLDLQFERNDVDFHRGTFRVRGDTLDIFPANQEIALRVEFWGDEVERITEFDPLTGEVLLNRTAVDIYPAKHFITTAETLKLAIADIQAELEARVAELEQQGKFLEAARLKQRTNYDLEMLSEVGYCSGIENYSRHLDRRAAGQTPWTLLDYFPDDFILFVDESHITLPQIRGMYAGDRSRKETLVEYGFRLPSALDNRPLRFDEFERHIHQAIYVSATPGPYEYEHSAQIVEQIIRPTGLLDPIVEVRPTRGQIDDLVGEIKRRVQKGQRALVTTLTKRMAEDLADYLKEMGIRTSYLHSDIETLERVEILRDLRLGVYDVVVGINLLREGLDLPEVSLVAILDADKEGYLRSGSSLIQIIGRAARHIEGTVIMYADTITQSMRTAIDETNRRRAIQEAYNREHNITPVGISKAVRDLTDRVRKVAEERGVYQVAEAPAELPIPKDEIVKLIKELEKQMKQAAKDLAFEKAAALRDQIVELRRTLALEEESQPLRS
>NC_009523.1|WP_011958402.1|4637359_4640617_+|DNA-mismatch-repair-protein-MutS
MTPAERRAFERQLQQEFPGLELHAWYRQYRSLKAAHPDAILLYRLGDFYETFDDDAKLVADLLEVTLTYKEFASQKGRDQKQRCPMAGIPYHAVEGYVARLVGAGYRVAIAEQITETPSSRTDTRPRSIFAAGIEQTSLTGSNRMVERKVVRVITPGTIIESGMIPAERNNYLAALIADHGRIGLAYADLSTGEFAAVEFSGERAAQQAQGELTRLNAAEILVPDRADLRLPGLEPSSARLEQDLEFLTREERELLLPGERVARRVERENNARWAHGRVTAWPERRWDLRNAHDTLLHQFGVRSLAGFGLEDRPLAIRAAGAIVQYARETQQGVVANLRSIRAYTPGDAMFLDPQTQRNLELLEGASGTTRGSLIGVLDQTRTPMGARLLRRWVSQPLCDLTRLHARHDAVERFVTDAILRASVRETLRRVGDMERVVNRIIQGVGVATPRDMARLRDALRALPELVAALGDWTPPPGEIDLTGVRTLPPSAATDPVSLTENGNERIEPNQTSAVSLRAQREARRRVSARYADEDLFGEEEQNAPPVGSSNHAVGTQPSADDEASPVTAFVDDQATETLALDPCADMLAFLETAIDDEPPALLGASNYLRAGENGEPPRRVIRPGFEPEIDQVVAASRDAQRWISELEPKERERTGIKSLRVDYNRVFGYYIEVPKTYADQVPKHYIRKQTLTTGERYFTDELKRYEEIVEQAQQRLIDLERRAFARICDVVTGAGARLLRTARMIATIDVFAALAEAAVRGRYVRPELYDDTRLRIVGGRHPVVEQTLDETFVPNDIEMDTETRQICLITGPNMSGKSTVLRQVALIALMAQIGSFVPADAAEIGLVDRIFTRIGAQDDIATGRSTFMVEMTETAALLAQSTRRSLIILDEVGRGTSTYDGMAIAQAVIEYIHNEPRLGCRTLFATHYHELTDLERTLPRLKNYHMAATEQDGRVVFLHELRPGGADRSYGIHVAELAGIPQSVIRRASELLAELERRAPRSAPPTVPARGDDRRSAGRASSSGAGAARGEQGRTLPDGQLSLFDLAPGPVIEMLRRIDINQLTPLEALNKLHELQKLARAGGG
>NC_009523.1|WP_157041160.1|4640623_4641124_-|isoprenylcysteine-carboxylmethyltransferase-family-protein
MIQKVRIMMQTFIERGGWWVTAQFGLLFALVAAPPELPGLPTLATILGQGALIVGVVLCGCGAMLAGAGLLHLGANLTPFPRPRDDGRLVQHGAYAIVRHPIYSGIIIGAFGWSLLRGSIIALVLSVALLVFFHLKSRREERWLVERYPEYADYQKRVKKIIPFIW
>NC_009523.1|WP_157041161.1|4641232_4642195_+|glycine-cleavage-system-protein-T
MDRDMYASALERAVIADERTAGRIFMRGRDRAALLHRLSTNDIERLKPGEGTLTVLTTPIGRIIDLLTVHALNDALLIVTSPDQGPPVFGHLRRNIFFNDQVTLDAAGRTHAQLALYGPQAARLIAELTGAAIDLPLHGITTTAIAGVSLLIARRKPIGGDSFTLYVPSDGYDAVQAALLAAGATPIDGDTLDVLRIERGYGAFGRELSQEYIPLETGLLDAVSFSKGCYVGQEIIARMESRGRLAKRLCGLQLSQPVASPAKLVCDGRDAGDLTSAAVSPRFGPIALAYVRTVYAEPGTVVGVEGTGVTGRVVELPFAA
>NC_009523.1|WP_011958405.1|4642220_4643180_-|Uma2-family-endonuclease
MTTATTRPTPAADTPPDDPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTSTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAAAEARAAAEAEARAAEARARAEAEARAEAEARARAEVEARLRALEAELRRLRGEEA
>NC_009523.1|WP_011958406.1|4643247_4644240_-|Uma2-family-endonuclease
MTTAASQPAPAAAADTPPDDPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTPTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAEAEAQAQREAARAEAEARARAEAEAQAQREAARAEAEARARAEVEARLRALEAHLRALGVDPDNA
>NC_009523.1|WP_011958407.1|4644334_4645333_-|Uma2-family-endonuclease
MTTTASQAVPATAADADPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTPTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAAAEARAAAEARARAEAEEQARREAEARAAEARARAEAEARAEAEARARAEAEARLRALEAELRRLRGEQH
>NC_009523.1|WP_011958408.1|4645406_4647200_-|cellulase-family-glycosylhydrolase
MRFKPWLSLAVLIMLAGAMIVPLRATAAARSPEEVPPTQPPFKARLFAETGHTAVNSFLSFWERTPNALFVLGYPISAPFIEESFTNPGEYYRVQYFERAVLEEHPENYGTPYYILGRLLGTEIVKGRENEPPFQPVPDPRDGTWDSVTRHTLRNSPAPFRNFWLNNGGLAVFGRPLSEQFQEVNQADGNVYWVQYFERQRMEWHPNEPDPRYRILLGLLGNEYRDAHHQGNPAFNPGAVAPDQPPPAPSNTFAYGYNVILYGHGSTSWQDRPRALRLVKESGFGWVRQQVRWMDLHDRSGAIYWGELDDIVEDCHREGVKVLLSVVAAPSWATPNGKNGLPSREHFGTFAYFMGEMAKRYRGKVQAYEIWNEQNLAVENGGRVPNASFYMDMLVQASQAIKANDPAALIVSGAPSSTETNAPTIAVSDLVFLRQMFADPRFRANVDIVGVHPGGAANPPDTFWPDNPGPGPGWTNSREFYFRRVEDVRAIMVQSGLGDMPMWVTEFGWATRNNTPGYGFGNQISFEKQAQYIVRAYQMARTNYAPWMTGMFLWQLNFAVPWRAQGNELHEQASYGVINGDWSPRPAYLALKAMPKD

Crispr_ID: NC_009523_87

• CRISPR_ID: NC_009523_87
• CRISPR_location: 4652676-4652769
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_87

Consensus_repeat	Method
ACGGGCGCAGCAGCGCTGCGCCTC	CRISPRCasFinder

spacers of NC_009523_87

>87.1|4652700|46|NC_009523|CRISPRCasFinder
TCCGCTGCCTCTCGCCGCCACCCCCGCCATTGCTCCTGCTGCCGAT

CRISPR arrays and Neighbor proteins around NC_009523_87

CRISPR arrays

The CRISPR arrays of NC_009523_87

>merge|NC_009523|87|4652676-4652769|CRISPRCasFinder
ACGGGCGCAGCAGCGCTGCGCCTCTCCGCTGCCTCTCGCCGCCACCCCCGCCATTGCTCCTGCTGCCGATACGGGCGCAGCAGCGCTGCGCCCC

>NC_009523|87|83|4652676-4652769|CRISPRCasFinder
ACGGGCGCAGCAGCGCTGCGCCTC	TCCGCTGCCTCTCGCCGCCACCCCCGCCATTGCTCCTGCTGCCGAT
ACGGGCGCAGCAGCGCTGCGCCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958416.1|4657678_4658170_-|peptidylprolyl-isomerase	unknown	unknown	gnl|CDD|223725
NC_009523.1|WP_157041161.1|4641232_4642195_+|glycine-cleavage-system-protein-T	unknown	unknown	gnl|CDD|223481
NC_009523.1|WP_011958420.1|4661903_4662773_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958408.1|4645406_4647200_-|cellulase-family-glycosylhydrolase	unknown	unknown	gnl|CDD|214750
NC_009523.1|WP_011958411.1|4650664_4651903_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|223701
NC_009523.1|WP_011958419.1|4660829_4661663_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|236216
NC_009523.1|WP_011958417.1|4658273_4658657_-|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|379311
NC_009523.1|WP_011958412.1|4651992_4652595_-|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl|CDD|274058
NC_009523.1|WP_011958415.1|4657042_4657618_-|acyltransferase	unknown	unknown	gnl|CDD|100053
NC_009523.1|WP_011958407.1|4644334_4645333_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958421.1|4662875_4663487_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958413.1|4652855_4654982_-|polyphosphate-kinase-1	unknown	unknown	gnl|CDD|235469
NC_009523.1|WP_011958409.1|4647345_4649151_-|cellulase-family-glycosylhydrolase	unknown	unknown	gnl|CDD|381626
NC_009523.1|WP_011958418.1|4658677_4660618_-|alpha-amylase	unknown	unknown	gnl|CDD|200489
NC_009523.1|WP_157041160.1|4640623_4641124_-|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl|CDD|367862
NC_009523.1|WP_011958414.1|4656142_4656769_-|DUF1405-domain-containing-protein	unknown	unknown	gnl|CDD|377788
NC_009523.1|WP_011958422.1|4663490_4664066_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958406.1|4643247_4644240_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958405.1|4642220_4643180_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958410.1|4649283_4650453_-|trypsin-like-serine-protease	unknown	unknown	gnl|CDD|273938

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958416.1|4657678_4658170_-|peptidylprolyl-isomerase	gnl|CDD|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	2.21828e-70
NC_009523.1|WP_157041161.1|4641232_4642195_+|glycine-cleavage-system-protein-T	gnl|CDD|223481	COG0404, GcvT, Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism].	1.16251e-49
NC_009523.1|WP_011958408.1|4645406_4647200_-|cellulase-family-glycosylhydrolase	gnl|CDD|214750	smart00633, Glyco_10, Glycosyl hydrolase family 10.	0.00137413
NC_009523.1|WP_011958411.1|4650664_4651903_-|AI-2E-family-transporter	gnl|CDD|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	7.94773e-41
NC_009523.1|WP_011958419.1|4660829_4661663_+|SDR-family-oxidoreductase	gnl|CDD|236216	PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional.	3.05821e-150
NC_009523.1|WP_011958417.1|4658273_4658657_-|HEAT-repeat-domain-containing-protein	gnl|CDD|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	5.64983e-05
NC_009523.1|WP_011958412.1|4651992_4652595_-|RNA-2',3'-cyclic-phosphodiesterase	gnl|CDD|274058	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase. This protein family consists of bacterial and archaeal proteins with two tandem copies of Pfam domain pfam02834. Members for which activity has been measured perform a reversible, ATP-independent 2'-5'-ligation of what is presumably a non-phyiological substrate: half-tRNA splice intermediates from an intron-containing yeast tRNA. The physiological substrate(s) in prokaryotes may include small 2'-5'-link-containing oligonucleotides, perhaps with regulatory or biosynthetic roles. [Transcription, RNA processing].	8.01179e-43
NC_009523.1|WP_011958415.1|4657042_4657618_-|acyltransferase	gnl|CDD|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	2.33049e-27
NC_009523.1|WP_011958407.1|4644334_4645333_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.96375e-16
NC_009523.1|WP_011958413.1|4652855_4654982_-|polyphosphate-kinase-1	gnl|CDD|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
NC_009523.1|WP_011958409.1|4647345_4649151_-|cellulase-family-glycosylhydrolase	gnl|CDD|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	0.00268987
NC_009523.1|WP_011958418.1|4658677_4660618_-|alpha-amylase	gnl|CDD|200489	cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NC_009523.1|WP_157041160.1|4640623_4641124_-|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl|CDD|367862	pfam04191, PEMT, Phospholipid methyltransferase. The S. cerevisiae phospholipid methyltransferase (EC:2.1.1.16) has a broad substrate specificity of unsaturated phospholipids.	1.61382e-18
NC_009523.1|WP_011958414.1|4656142_4656769_-|DUF1405-domain-containing-protein	gnl|CDD|377788	pfam07187, DUF1405, Protein of unknown function (DUF1405). This family consists of several bacterial and related archaeal protein of around 180 residues in length. The function of this family is unknown.	5.95161e-41
NC_009523.1|WP_011958406.1|4643247_4644240_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.03926e-16
NC_009523.1|WP_011958405.1|4642220_4643180_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.24763e-16
NC_009523.1|WP_011958410.1|4649283_4650453_-|trypsin-like-serine-protease	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.6354e-103

Protein sequences

>NC_009523.1|WP_011958412.1|4651992_4652595_-|RNA-2',3'-cyclic-phosphodiesterase
MNMATYRLFIAVELPDTLREELADLQTRLKRDQPPVRWVKPEAMHLTLWFLGDVPGDQVSHLKIAMMLSFAGQQAAHIRLGAPGAFPNLQRPQVIWVGLAEGEAHLRSWYDALARRLPSLGFHPDPRPFRPHLTLGRVRHEASAEQQQRLGAALRSLKLSSNHTWNLQRVVLFRSDLRPEGPRYTALAEVDLQGLEAASG
>NC_009523.1|WP_011958411.1|4650664_4651903_-|AI-2E-family-transporter
MLSGRLATVALWLLIICAAVFLFERAVVVVSFFATPLLLFALAWLIAVVLQPLVSRLTALDLPPITIRARRVPPPPRHLSRMLSVALIYLALFAALIVVILSFVPAITQQLTTLTGSVPTTVESIARWIGRLDESLERFGFRGDLTAIVQPEAIAQQLTGFGSAMLQQSLGIAGSIATVLFNIFLVLILSFYITLDGPRMGKSFVAVLPQSWHDEVDNLFAVIDRVFGGFMRAQFVNSLLYGVANAIVMAMFGLGDIALASVVAAILVFIPLVGGFFALIPPALFAILFAPDRLGWLLLTLLIVQQVQFNIVMPRLVGQAIGLHPLLVFAALLLGGTVAGGWGVLFGIPVAGVIASITQFFYERARRTAMMLPTDETSPSVPPAAPASVADPVAGHPSPAPVVDPVSGHPPS
>NC_009523.1|WP_011958410.1|4649283_4650453_-|trypsin-like-serine-protease
MENRSGEKRSPCVIYALLGGLSLVSGVVGTLVGGALIWFFVARPIADQTAQTTVPATLPSTLLPSPTPLVVATDDPVRTAPARIAREAGPSVVTVVSQLPPQVGFFGTFQPPPARGSGVIIDPRGYIITNHHVVEGARQLYVILADGRQRPAQLIGSDYPFSDLALIKIEGDTYPAARLGDSDAVQAGDWVVAIGSALGDLRNSVTVGVVSGLGRSLQTRDVVLDDLIQTDATINRGNSGGPLLNLDGEVIGINTAIIRGGAEQAEGIGFAIPSNTVRYVADQLITRGRVARPYLPIEFVPITPRLAAWYNLPVDYGLFIQAVRRGSALAQAGVQPGDILLSLGGQRIDEAHPLLRVLARHQVGEEVEIEIWRDNAIQTIRITLEELPR
>NC_009523.1|WP_011958409.1|4647345_4649151_-|cellulase-family-glycosylhydrolase
MFQQMKTAIPRLLSLLTLIAIIVGIVVAPRQSRAAARSPAEVPDTYPPYLAQYYPQTGHSAVNSFERFWRNTPNALFVLGYPISRPFIEESFTNPGEYYRVQYFERAILEEHPQNYGTPYYILGRLLGTQLAKGRENEPPFQPVPDPRDGTWDSVTRHTLRNSPAPFRSFWLNNGGLAVFGRPISEQFQEVNKADGKTYWVQYFERQRMEWHPDEPDPRYRILLGLLGNEYRDANHRNNPAFTPAPRDDARSLPRPFIYGYNAHLYQDREPWQDRKRVLQLVKNSGFGWVRQQVRWMDLHDRSGAIYWEELDDIVRDANEMGVKLFISVVAAPSWATDNGRNGLPNRANIGQFAYFMGEMAKRYRGRVGAYQIWNEQNLAVENGGRVASAALYMDVLVAGARAIKANDPYAIVVSGPPAATETNNPNIAISDLAFFRQMFADPRFRDVVDAIGVHAGGTSNPPDSMWPDRPGPGPNFVTSREFYFRRVEDYRALALQYGLGDRQMWITEFGWATRNNTPGYEFGNQISFEQQAEWIVRAFQIGRREYAPWMGAMFLWNLNFAVPWAQREGNPLHEQASFGILNGDWSPRPAYLALQRMPKD
>NC_009523.1|WP_011958408.1|4645406_4647200_-|cellulase-family-glycosylhydrolase
MRFKPWLSLAVLIMLAGAMIVPLRATAAARSPEEVPPTQPPFKARLFAETGHTAVNSFLSFWERTPNALFVLGYPISAPFIEESFTNPGEYYRVQYFERAVLEEHPENYGTPYYILGRLLGTEIVKGRENEPPFQPVPDPRDGTWDSVTRHTLRNSPAPFRNFWLNNGGLAVFGRPLSEQFQEVNQADGNVYWVQYFERQRMEWHPNEPDPRYRILLGLLGNEYRDAHHQGNPAFNPGAVAPDQPPPAPSNTFAYGYNVILYGHGSTSWQDRPRALRLVKESGFGWVRQQVRWMDLHDRSGAIYWGELDDIVEDCHREGVKVLLSVVAAPSWATPNGKNGLPSREHFGTFAYFMGEMAKRYRGKVQAYEIWNEQNLAVENGGRVPNASFYMDMLVQASQAIKANDPAALIVSGAPSSTETNAPTIAVSDLVFLRQMFADPRFRANVDIVGVHPGGAANPPDTFWPDNPGPGPGWTNSREFYFRRVEDVRAIMVQSGLGDMPMWVTEFGWATRNNTPGYGFGNQISFEKQAQYIVRAYQMARTNYAPWMTGMFLWQLNFAVPWRAQGNELHEQASYGVINGDWSPRPAYLALKAMPKD
>NC_009523.1|WP_011958407.1|4644334_4645333_-|Uma2-family-endonuclease
MTTTASQAVPATAADADPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTPTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAAAEARAAAEARARAEAEEQARREAEARAAEARARAEAEARAEAEARARAEAEARLRALEAELRRLRGEQH
>NC_009523.1|WP_011958406.1|4643247_4644240_-|Uma2-family-endonuclease
MTTAASQPAPAAAADTPPDDPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTPTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAEAEAQAQREAARAEAEARARAEAEAQAQREAARAEAEARARAEVEARLRALEAHLRALGVDPDNA
>NC_009523.1|WP_011958405.1|4642220_4643180_-|Uma2-family-endonuclease
MTTATTRPTPAADTPPDDPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTSTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAAAEARAAAEAEARAAEARARAEAEARAEAEARARAEVEARLRALEAELRRLRGEEA
>NC_009523.1|WP_157041161.1|4641232_4642195_+|glycine-cleavage-system-protein-T
MDRDMYASALERAVIADERTAGRIFMRGRDRAALLHRLSTNDIERLKPGEGTLTVLTTPIGRIIDLLTVHALNDALLIVTSPDQGPPVFGHLRRNIFFNDQVTLDAAGRTHAQLALYGPQAARLIAELTGAAIDLPLHGITTTAIAGVSLLIARRKPIGGDSFTLYVPSDGYDAVQAALLAAGATPIDGDTLDVLRIERGYGAFGRELSQEYIPLETGLLDAVSFSKGCYVGQEIIARMESRGRLAKRLCGLQLSQPVASPAKLVCDGRDAGDLTSAAVSPRFGPIALAYVRTVYAEPGTVVGVEGTGVTGRVVELPFAA
>NC_009523.1|WP_157041160.1|4640623_4641124_-|isoprenylcysteine-carboxylmethyltransferase-family-protein
MIQKVRIMMQTFIERGGWWVTAQFGLLFALVAAPPELPGLPTLATILGQGALIVGVVLCGCGAMLAGAGLLHLGANLTPFPRPRDDGRLVQHGAYAIVRHPIYSGIIIGAFGWSLLRGSIIALVLSVALLVFFHLKSRREERWLVERYPEYADYQKRVKKIIPFIW
>NC_009523.1|WP_011958413.1|4652855_4654982_-|polyphosphate-kinase-1
MTSVAFETIENDMALLSAASPYFNRELSWLEFNRRVLEEAMDERHPLLERVKFLSIFSTNLDEFFMIRVAGLKQQIAAGVASRSPDGLTPSEQLHAIRRVVIPLLEQHRSCWLDDIKPKLHEQGVHVFDYHELTPAQRAACAEYFEREVFPVLTPLAIDPAHPFPHISNLSLNLAVVIHDPDEGELFARVKVPAVLPRLVPIEGGLCDSPDDIPPERRYCFTWLEQIITANVASLFPGEEIVECYLFRITRNADMEIEEEEADDLLRVIEEGVRQRRFGAVVRLQVQHSMPERVRNLLLTNLKLTPDDVYEMRGPLGLSDLMQLTKIDRPDLKDPPFYPIPPAPLQNARSSEELFAAIRQHDILLHHPFHSFQPLVSLIQAAAEDPNVLAIKQTLYRVGSNSPIVKALMHAREQDKQVTVLVELKARFDEENNIIWAKQLERAGVHVVYGLVGLKTHAKLALIVRREHDGLRRYVHLGTGNYNATTARIYTDLGLLTARPDIAADVSELFNHLTGFSRQRHYRKLLVAPVSMRECLEALIEREIAHAQAGRQGHLIFKCNAIVDKKIIDLLYRASQAGVTIELIARGICCLRPGVPGLSERISVRSIVGRFLEHSRIYYFANNGNPDIYLGSADLMERNLDRRVETLFPIESEPLKAEIRQLLDVYLRDTSRARILMPDGSYVRARPPEGEAPFDSQAFLSRDNMTPR
>NC_009523.1|WP_011958414.1|4656142_4656769_-|DUF1405-domain-containing-protein
MIRLTHWLFEFILRTPIIFWCCVVANLIGAVWGAAVWYGPMLAASPLWAWPFIPDCPLAAFLGTIALFGMRAGRRWTLFYTLTAFACIHYGIWTLVFWLRQWTGSGVIDPFEMVLFVTHIGLLCEGVLFATRLGDVSFPQRLTVIGWFVLAFGVDYGLGYHPPLASHVTFDFIMWLTVALTGGLSIALLALPRTVAQPARLSTTTVEG
>NC_009523.1|WP_011958415.1|4657042_4657618_-|acyltransferase
MPPLTPVAGINAPSLPAPGPDGLGSSAARKARLHIAPSPGPHNALWYFPRVTGGHLRVARNALIIQIARYTPSLALKNALYRLIGMRVGSHVSVGLMVMFDIFFPQDVTLGDNCIIGYNSTILCHEFTRHEWRRGPVWIGRDVTIGANTTILPGVVIGDGATVSAMSLVNRDVPPGAFVGGVPVRMLNGGR
>NC_009523.1|WP_011958416.1|4657678_4658170_-|peptidylprolyl-isomerase
MPPKQWASPPPMQIDPNRQYRARMMTSKGEIVIDLAARYAPKTVNNFVFLANEGFYNGVVFHRVISNFVIQGGDPTGTGRGGPGYTFEDEVDPKKNLLKHEAGVLSMANAGPNTNGSQFFITHSPQPHLNGKHTVFGKVTSGMDVVNAIRQGDQILNVTIEVL
>NC_009523.1|WP_011958417.1|4658273_4658657_-|HEAT-repeat-domain-containing-protein
MQFYCPVCFAEVAADERDAPCRVCGARAEEWQRRDYTERLIHALRHPNPEVRMGAIISLGNRRDPRAALPLAECALAHPIDVVQALAIVRALHAILPAPERETALDMLAAHPARAVRRAVARMRSEP
>NC_009523.1|WP_011958418.1|4658677_4660618_-|alpha-amylase
MTFVRDMLSRPRPPRIRHDVQLPRRVAYYPSPVDWRDEVIYFLMVDRFSDGQEDTRPLLDRRYLAAARPALPNGDPWRWDRWALSGGERFQGGTLRGIISKLGYLQRLGITTLWLSPVCKQRVHLDTYHGYAIQDFLDVDPRFGTRQDLVDLVSAAHERGMRVLLDIVFQHTGPNWRYPPDVPGGADMPRYTSGRYPFGSWVDAAGAPLVGIPDVNDAAWPEEMRTIDYYTRAGAGDLGAGAIDDPDAEHKRSDFFTLRDINLDAPGALTDLALCYKYWIALTDCDGFRIDTLKHVSFEQARNFCGTIKEFAANLGKANFFLVGEVAGGDFAATRYLDALERNLNAALDIGEMRLALGDVAKGLAPARAYFDGFVPGLAIMGSHRNLGSRHISILDDHDHVFGTKLRFSTDVMSQHHAAAAVALQLFTLGIPCIYYGTEQALGGPEPSERQWLPEWGRADRYLREAMFGPLHPRASGRAGIDPQALDTSLPGFGPFGTAGHHCFDERFPVYLRIAALAALRAAFPVLRHGRQYLRPISNFNQPFAFPPAGEIVAWSRILDDEEALCVINPNGLAARGGDVVVDAALNRPGDTMTVILNTAQAADPDGYDGLYPKGRQLTVRERNGTSYVEIRNLPPAETLVLTNRP
>NC_009523.1|WP_011958419.1|4660829_4661663_+|SDR-family-oxidoreductase
MSEPFLHSLFSLEGKVAVVTGGSGALGAAMAKGLAQAGARVAVLARRIEPVTAIVAAIETGGGTALALSADVRERAQVERACATIVDRWERVDILVNAAGGNMPGATLAPEASLLDLDPEAFRAVVDLNLIGVLLPSLVFGATIITAPGQGTIINISSMAAQRPLTRIAGYSAAKAAVENLTRWMAIELARRYGSGLRVNAIAPGFFIGEQNRALLLNPDGSLTARGEHILAHTPAGRLGVPEDLIATLIWLCSPGAAFVNGAVIPVDGGFSAFSGV
>NC_009523.1|WP_011958420.1|4661903_4662773_+|hypothetical-protein
MRRIVFLTPLLIIAILAAAMPVSASAPPFGNDAFRRVWERQDRPVAEQISGRSWTWGPAPNTPALREPLLEGYEGMRVVQYFDKSRMEINDPTANPFSPWYVTNGLLPIELMTGRMQVGYNLFEWRLPARISAVGDPDQFPTYADLLRFYQNPGAVNPNDLYRPATGFINPDGSITGFNDYVNDPATVLLPGDNNHGVARAFLDFMNQSGLVYENGRYVTAKVYDPLYVFGLPVTGAYWVKVRVGGVERPILFQVFERRVLTYNPANPPAFRVEMGNVGQHYYWWRYGR
>NC_009523.1|WP_011958421.1|4662875_4663487_+|hypothetical-protein
MPRRRNWIAGGILVGLLVGCGQAAPLSVQTTSTPLAPARATAAVVLTSVAEGVEVRIEPATAGQSGSIGDVTATPEALVQATSEGAPAANIAAAEQTVRAYFAAFGGRRAAEAWALLTPAMQAITPLDMFESTTQAVQSLTLTRIDSVVAADGRLIYGVTVDAEPVPDLPTRWKRGSNQLYVVVINTPEGWRIAAITEEPPSL
>NC_009523.1|WP_011958422.1|4663490_4664066_-|hypothetical-protein
MGKQSRIKRERREHATYLATVSNCEGTWLERPPDADEQAKIDSAGKILRRFRMQALQLGADRDAFNRFSLEIFRDERFAPLHFSDDMIEMILEEIGEPPVVEDDSDPSFTNYLLRALGVVASARVRRTMAEQARRFLPQYVAAGQYKEALAIEHNCYMTVMSDAATPLLVQMLVSGLARYYEEHEPDETVA

Crispr_ID: NC_009523_88

• CRISPR_ID: NC_009523_88
• CRISPR_location: 4772918-4773016
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_88

Consensus_repeat	Method
GGTAGAGCCCGCGCAGGCGGGCTTCGCCTTG	CRISPRCasFinder

spacers of NC_009523_88

>88.1|4772949|37|NC_009523|CRISPRCasFinder
CATAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCC

CRISPR arrays and Neighbor proteins around NC_009523_88

CRISPR arrays

The CRISPR arrays of NC_009523_88

>merge|NC_009523|88|4772918-4773016|CRISPRCasFinder
GGTAGAGCCCGCGCAGGCGGGCTTCGCCTTGCATAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCCGGTATAGCCCGCGCAGGCGGGCTTCGCCTTG

>NC_009523|88|84|4772918-4773016|CRISPRCasFinder
GGTAGAGCCCGCGCAGGCGGGCTTCGCCTTG	CATAGCCGAGGGCTTATGGTCTTTGAAGAAATAATCC
GGTATAGCCCGCGCAGGCGGGCTTCGCCTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958502.1|4761649_4763167_+|replication-associated-recombination-protein-A	unknown	unknown	gnl|CDD|237355
NC_009523.1|WP_011958509.1|4769486_4769870_-|response-regulator	unknown	unknown	gnl|CDD|381085
NC_009523.1|WP_011958501.1|4760553_4760814_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170
NC_009523.1|WP_041334149.1|4776810_4777497_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011958506.1|4765980_4766637_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl|CDD|178974
NC_009523.1|WP_011958514.1|4777592_4778768_-|galactokinase	unknown	unknown	gnl|CDD|179937
NC_009523.1|WP_011958511.1|4773116_4775510_-|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NC_009523.1|WP_011958505.1|4765272_4765839_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|131997
NC_009523.1|WP_011958521.1|4786792_4787458_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958516.1|4781404_4784266_+|hypothetical-protein	unknown	unknown	gnl|CDD|376008
NC_009523.1|WP_011958508.1|4767346_4768111_+|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NC_009523.1|WP_011958510.1|4770228_4772580_+|endopeptidase-La	unknown	unknown	gnl|CDD|223542
NC_009523.1|WP_011958519.1|4785547_4785787_+|DUF2283-domain-containing-protein	unknown	unknown	gnl|CDD|378367
NC_009523.1|WP_011958515.1|4779002_4781240_+|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	unknown	unknown	gnl|CDD|377001
NC_009523.1|WP_011958503.1|4763191_4764349_+|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223737
NC_009523.1|WP_011958504.1|4764345_4764957_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl|CDD|234691
NC_009523.1|WP_011958512.1|4775599_4776778_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|274368
NC_009523.1|WP_011958517.1|4784274_4785150_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_009523.1|WP_011958520.1|4786025_4786796_-|enoyl-CoA-hydratase	unknown	unknown	gnl|CDD|235664
NC_009523.1|WP_011958507.1|4766661_4767336_+|peptidase-M50	unknown	unknown	gnl|CDD|100079

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958502.1|4761649_4763167_+|replication-associated-recombination-protein-A	gnl|CDD|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NC_009523.1|WP_011958509.1|4769486_4769870_-|response-regulator	gnl|CDD|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	4.92025e-25
NC_009523.1|WP_011958501.1|4760553_4760814_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.44655e-12
NC_009523.1|WP_041334149.1|4776810_4777497_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.06096e-88
NC_009523.1|WP_011958506.1|4765980_4766637_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl|CDD|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	1.45716e-92
NC_009523.1|WP_011958514.1|4777592_4778768_-|galactokinase	gnl|CDD|179937	PRK05101, PRK05101, galactokinase; Provisional.	4.82688e-171
NC_009523.1|WP_011958511.1|4773116_4775510_-|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	5.52421e-61
NC_009523.1|WP_011958505.1|4765272_4765839_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|131997	TIGR02952, RNA_polymerase_sigma-70_factor_ECF_subfamily, RNA polymerase sigma-70 factor, TIGR02952 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is found in a limited number of Gram-positive bacterial lineages.	1.32133e-47
NC_009523.1|WP_011958516.1|4781404_4784266_+|hypothetical-protein	gnl|CDD|376008	pfam18582, HZS_alpha, Hydrazine synthase alpha subunit middle domain. The crystal structure of hydrazine synthase multiprotein complex isolated from the anammox organism Kuenenia stuttgartiensis implies a two-step mechanism for hydrazine synthesis: a three-electron reduction of nitric oxide to hydroxylamine at the active site of the gamma-subunit and its subsequent condensation with ammonia, yielding hydrazine in the active centre of the alpha-subunit. The alpha-subunit consists of three domains: an N-terminal domain which includes a six-bladed beta-propeller, a middle domain binding a pentacoordinated c-type haem (haem alphaI) and a C-terminal domain which harbours a bis-histidine-coordinated c-type haem (haem alphaII). This entry represents the middle domain of subunit alpha of hydrazine synthase (HZS).	4.75668e-09
NC_009523.1|WP_011958508.1|4767346_4768111_+|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	4.63548e-151
NC_009523.1|WP_011958510.1|4770228_4772580_+|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NC_009523.1|WP_011958519.1|4785547_4785787_+|DUF2283-domain-containing-protein	gnl|CDD|378367	pfam10049, DUF2283, Protein of unknown function (DUF2283). Members of this family of hypothetical bacterial proteins have no known function.	3.73655e-12
NC_009523.1|WP_011958515.1|4779002_4781240_+|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	gnl|CDD|377001	pfam03170, BcsB, Bacterial cellulose synthase subunit. This family includes bacterial proteins involved in cellulose synthesis. Cellulose synthesis has been identified in several bacteria. In Agrobacterium tumefaciens, for instance, cellulose has a pathogenic role: it allows the bacteria to bind tightly to their host plant cells. While several enzymatic steps are involved in cellulose synthesis, potentially the only step unique to this pathway is that catalyzed by cellulose synthase. This enzyme is a multi subunit complex. This family encodes a subunit that is thought to bind the positive effector cyclic di-GMP. This subunit is found in several different bacterial cellulose synthase enzymes. The first recognized sequence for this subunit is BcsB. In the AcsII cellulose synthase, this subunit and the subunit corresponding to BcsA are found in the same protein. Indeed, this alignment only includes the C-terminal half of the AcsAII synthase, which corresponds to BcsB.	1.31002e-92
NC_009523.1|WP_011958503.1|4763191_4764349_+|FAD-binding-oxidoreductase	gnl|CDD|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	9.8371e-65
NC_009523.1|WP_011958504.1|4764345_4764957_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl|CDD|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	1.48096e-47
NC_009523.1|WP_011958512.1|4775599_4776778_-|PAS-domain-containing-protein	gnl|CDD|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	1.78763e-82
NC_009523.1|WP_011958517.1|4784274_4785150_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.78111e-27
NC_009523.1|WP_011958520.1|4786025_4786796_-|enoyl-CoA-hydratase	gnl|CDD|235664	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional.	2.38155e-88
NC_009523.1|WP_011958507.1|4766661_4767336_+|peptidase-M50	gnl|CDD|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	2.2184e-16

Protein sequences

>NC_009523.1|WP_011958510.1|4770228_4772580_+|endopeptidase-La
MGKTIETSDYDLPLVILGEMVIMPHMTVPLQVGQGKSYRAMEHAWDRDHLVLLIFVSESEIETYKSSQPQQLPPVGVIARLEEFVRLPDGTARIILEGISRALVQTLLQSEPFYRVRCHAISDPEPKGIEIEALMDSVKQQIDEFVDHLGEVPQDAVAFVHRIDRPGHLADIVTWAPAFEFEERLDILNELDPVERLRRAHRLLARQLELLKLRQKIQQDTKEVLDQSQREYFLREQMRVIRRELGEDDDIDDPIDELKRKIAQLDAPDYVKEQAMHELKRLAQQGMNSPEAGVIRTYLDWILNLPWAEEELPEISLHEAQKVLDEDHYGLEKVKERILEYLAVRKLAGNRMRSPILCFVGPPGVGKTSLGRSIARALGRKFVRTSLGGIRDEAEIRGHRRTYIGALPGRIIQGMKTAKSRYPVYVLDEIDKVGQDFRGDPTSALLEVLDPEQNNAFSDHYLEIPFDLSQVVFIATANQLDTIPSPLRDRMEIIEIGGYTEDEKLGIAQGFLVRKQREFHGLTPDQLIITDDAIIKLVREYTREAGVRNLEREIASLCRKTARKVAAASDGEPIEFPIVIDAPDIPNYLGPERYTFGLAEEKDEVGVATGVTWSPTGGDVLSIEVLPVRGKGGLQLTGQLGEVMKESAQAAMSYARFRAEQFGIDPSYFDEHNIHIHVPEGAVPKDGPSAGITLTTALISAMTGKPVRRDVAMTGEITLRGKVLPIGGLKEKTLAAHRAGIRTFILPKDNAKDIAELPKKVREELQLIPVSSMDEVLKIALAH
>NC_009523.1|WP_011958509.1|4769486_4769870_-|response-regulator
MMAQHTILIVDDEANQRLMLTQALRTNDEREIATAASVSEAVEWLDTHNADLIITDYNMPSANGLALIAHVRQRALPARIILITAYYSPELQEAAQNLGVDHFLTKPVPLSLLRRLANDLGNPSASS
>NC_009523.1|WP_011958508.1|4767346_4768111_+|triose-phosphate-isomerase
MRTPLLAGNWKMYKTTGEARELVEGLLHGLGDVSDRKVLVCPPFTALHTVRDLVQGTPIALGAQDVYIEPQGAFTGAISPVMLRDLGCTYVIVGHSERRAIFGEGDELIGKKVRAALAHDLTPILCVGETKPQRDAGEAETIVVAQVRAALAGMTPDQIARIVIAYEPVWAIGTGDTATPADAQAMHVTIRQTLGELAGSDVADAINILYGGSVKPDNIDDLMAQPDIDGALVGGASLKADSFLRIVHFLPIQG
>NC_009523.1|WP_011958507.1|4766661_4767336_+|peptidase-M50
MFSTPDEGIFAGRSNDTIELLKAWGGTTVAFAVFQTGAANLASSRFLVNLFIAAVVCGLGFVLHELAHRIVARRFGAQAHFVANVQMLAISIVVAFLPLGLFFAAPGAVWHRGYLTPRQSGLIALAGPATNMALAVIFLIAAPFVFLVGLRDNWIVGLFYTGVALNAWLGLFNMIPAGPFDGAKVLAWSPVVFGVTVGIGILLAFVLPGNLLTIWLFVLRLLGS
>NC_009523.1|WP_011958506.1|4765980_4766637_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MDFANERRAMIDLLVQRGIRDRRVLDAMAQVPRHAFVPENERSFAYSDQALPIGEGQTISQPYMVALMVEALQLAPTDRVLEVGAGSGYAAAVLSRIVAKVHTVECREALAERAVALIQALGYTNITVHIGDGTQGLPDYAPFDAILVSAASPWVPAPLREQLASSGRLVIPVGGRQAQILLRLRREGDTLRTERLCDVRFVPLIGGHAWTAERYPER
>NC_009523.1|WP_011958505.1|4765272_4765839_-|sigma-70-family-RNA-polymerase-sigma-factor
MHASPDPNPASSDRELIERARNGDHAAFAQIYDRYAKPLYRYIYFRVGDADLAEDLRSEVFLRALESLDRYEDRGWPFSAWLYRIARDRTIDMLRRRRFRQTVPLESWSGACEGPDREVAARLDCEELRRHLCNLTDDQRQVIYLRFMADLSVQEVALRLGRSEGAVKALQHRGLQSLARRLAVCECV
>NC_009523.1|WP_011958504.1|4764345_4764957_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MMPTIASIALVLLAYLSGSIPFSLLVARAWGVDLRVSGSGNVGAANVWRTCGFSAFALAMGGDMLKGALPTIAAQALGLSPLAVVIVGTAAMLGHTRSIFLGFRGGKAVATGGGVVLTLAPLVALPGLAAWAVTFGITRISAVASLTAAAVCGIAAAVLLALGMLPPAYAIFVWGAVAAIVFLHRSNIHRLRTGTENRFEKLF
>NC_009523.1|WP_011958503.1|4763191_4764349_+|FAD-binding-oxidoreductase
MLPQTADVVIIGAGIIGASIAYHLAVRGCTNVVILEKEETEISGSTARSVAGVRHQFSTEVNIRLSLYSIERLKRFHEEVGGHAGLQQSGYLFLIDNQADWETYRANVALQRSLGVRVELLAPEDAAQFIPGMRIDDLIGATFGPDDGFCDPHGIAIGYLNRARDLGVRLERATPVVGIRVVGDHVAGVETPVGVINCPVVVNAAGPWAGEVGMLAGLEIPVRPYRRCVYVTEPFPLIPGPIPLTVDVGTGFYMRKEHENVLFGKSNYAEPPGYNLAVDWEWLDVVLEAGLRRFPILERAGLAEKLCWAGAYEITPDHMPILGRHPELEGYVDASGFSGHGVMHAPATGLLIAEEILDGRAHTIDIDPLRINRFRGVLKRELNVI
>NC_009523.1|WP_011958502.1|4761649_4763167_+|replication-associated-recombination-protein-A
MPRNQKTLFDTQREEALNRQAPLAARMRPRTLDEFVGQDHIIGEGKVLRRAISNDALFSIILWGPPGSGKTTLARIIADTTNAHFEQLSAVSAGVADLRRVVKEAQDRLGMFQQRTIVFIDEIHRFNKAQQDAILPYVEDGTIILIGATTENPSFEVNPALRSRARVFVLEALTDDQIGVIVDRALSDTERGLGELNVLLAADARGYLINMSNGDARTALNALEAAALAKPPGVGGKRLITVEDIRDALQSRAVRYDKNGELHYDAISALHKSVRDSDPDAALYWLGRMLDGGEDPLYIARRVVRMAIEDIGLADPQALPLTIAAQQAVHFLGQPEGDLALAQAVVYLAQAPKSNAVYTAYAAALKDVAETRNEPVPLHLRNAPTPLMKGLGYGRGYQYAHDDDDARVDQEHFPPNLQGRRYYEPTGRGFEATVRERLAWRDTRSSDPRASRVMGSARSSTDTPQGNASPAIDPQALAGEEPQIPADDAAEISQVARPPSRRRSK
>NC_009523.1|WP_011958501.1|4760553_4760814_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGPISWIIFGALAGWVASLLVGVEERQGCLMNIIIGILGAFVGGLIMDLLGFGGTNFGWDVRSFGVAVLGAIVLLAITGRTRKQRR
>NC_009523.1|WP_011958511.1|4773116_4775510_-|diguanylate-cyclase
MTFLAHDEHTVALLQAVIETTSEAVLVTDGTGKILLLNQRFEDLWRLTPGWLETITSRDRMQHLATLVSDGEQFLVRVEELYADPNLEVIDWLTLRDGRIIERYTCGMRLDPQRTVRIWLFRDITSRERAQHELKVMKSVLEALNRIIEPQRQLQAGLRALVRETGARAAWLWGVEGSDSARLLAHEGARELQIDLTPRAPGDPCECLQRLIHHEFPSAAHPITCPRLAHLHDADQEPAQHISIPIYSRDRPLAILNLVMPAGSSFGVVEQRMFAAIANQFSVAIERARLFESVREEQRTAEVLRQASATLSALLDVEQVLDHVLDQIVALMPCDGASVMLVEGMQARVVRVYGYEKLSDETGRALHQVTFEIARTPTLRRLIETGQPWIIHETLNNPAWVRIEQAFPIRSWLGAPVIVRQQTVAFICVDSFTPYSFRPEHARRLATLASGVSLALQNAQLYAQAYEALERERRLGDLTRTISSALDIDVILDSVVRLSVELVGADAAALGLLSPDHRILARTHTFNMPEALMTLKQGIEPVWEAIERQRIIIRHRVVYAHAGEIKSIPSVLGAPVVAGDRMLGVLAVYHLHDHSHFSERDGAMLEIVGRQTGIAITNAQLFTETQRLATTDQLTGLFNRYHFFALAPRELERARRYRHDVALLIIDVDHFKTINDTYGHVAGDTVLQHIADHMRRELRDADILARFGGEEFIALLPETNLTGALRVAGRLRATIEANPVPLNGQSIRATISVGCASLHPATRDEHLDTLIQRADRALYTAKAGGRNQVASDASYGD
>NC_009523.1|WP_011958512.1|4775599_4776778_-|PAS-domain-containing-protein
MEWIIATLVIALGLSIVWGWRQRQIALQSPPPPPQHDSFSPLFHAAAHAFDDGVVLVDADRRVRYINRQAEELLNLSHTISIGQGLITLARDYQVDAMVEEAIASAEPRESIFQPLGRQRTLRLRAIPLDDGARGALLLVRDVTQLSLLERARRDLVANVSHELRTPLASMKLLVETLQSDPPPPVAKRMLDQIAQEVDAITQLVEELHELAQIESGRVALQLVPAPLAPLVARTIERIRPQMDRKHLQMTTDVPDDLPQALIDCNRVGQVLLNLLHNASKFTPEGGCVSIAARVITVGDGSPPPPGLPPSHAPGQWLLLSVTDNGIGIPATDLSRIFERFYKVDRARTRNAGGTGLGLAIAKHLVEGHGGRIWATSIEGEGSTFYLTLPVA
>NC_009523.1|WP_041334149.1|4776810_4777497_-|response-regulator-transcription-factor
MSTILLVEDDPILSETLRYNLEREGYAVINAPDGVVGLERARRDQPDMVILDVMLPRLDGFSVCRILRQESEVPILILTARQDEIDRIAGLELGADDYVAKPFSLGELLARVRAIMRRSDRRISALREVLDAGAIRLDTGSRRAWRDDVELNLSQKEFDLLACLMRNRGIALSRDVLLERVWGYDFLGDSRTVDVHIRWLREKVEPDPGKPTYIQTVRGIGYRFEAPD
>NC_009523.1|WP_011958514.1|4777592_4778768_-|galactokinase
MLDTGELRERFQQHYGIHPHVIVRAPGRVNLIGEHTDYNDGFVFPVAIDRATCVAARPRTDRIVRVMAADLHDEDLFSIDQIERSNRAWHNYIRGVVLALRTAGHTLSGADMLIASDVPRGAGLSSSAALEVAVAYTFQVLNRLNILGEELALLAQGAENTFVGVQCGIMDQLIAVFGRADHALLIDCRDLTYRAVPLPPSVAVVVCDSHIARTLAASAYNQRRQECDAAVRALQQWYPGIRALRDVSEDQLAAHQHELPEPLRARARHVVSENRRALQGAAALEAGDIATFGRLMNESHASLRDDYQVSLPDIDFLVTTAQSLAGCYGSRLTGAGFGGCTVSLVERSSVETFRHDLAQAYHDATGRTATIYVCRASDGVGRVMDNARPQE
>NC_009523.1|WP_011958515.1|4779002_4781240_+|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB
MHLMILFARLFSWALVVTLMIGSMGVAHAQSTEPPQPDDQNVVAFERLGVTDQTLSGVFDGTRYLFNIPANWRLASGAQAQLDLSVFFPVGSAQQRLGGFLEARFNRVLIGTVELTQPGDRRVVFDIPDRALTPVRSDGRHEFEVALDNPTGCDVAPSERTAVVIRSTSRFVLPHTLAPLDTDLRNLPRPIFQGSFEPDQATIVIPDTPSISDLQAALTVAASFGRLTEGRLQIDLTTVQRLSPQARTGRHLILVGSHTGLAPLARNLDLPATLRENGFAAPGATPDDGILQMIVSPWNSERVVLVVSGASEAAVVKAARALSAVPVRINNRPNVAVVRDLPEAPADVALAIDQRLSDLGLEPRVIRDRTGTFDLRFTLPPGQQIDEGAYFDLTFNHAATVDFGQSSLSVGLNGIPIGSVRFSDETTRVTTGRITIPPSATRSGANVLTIQTNLVPRSLCTDVRNTDLWVTIWPESALHLPMKPVTAEPRRTFNLSSYPLPFTLNPSLATTAFVVPQRAPAAWNAAALLAFQMGRQTRDAILQPLAVFADNVPTDVRESYHLLVIGRPGTLPILVELGDALPAPFDAGSDVPRSVDTPVVYRVPPDASVAYLQMVAAPWNPERVVVAALGSDDSGIEQATTMLIDPRQRARLTGTLAIVDPQQRVTLGNGRAVLTGSAPTPVATVTPVAVQPTQPTPQTVQPTPAPSRNASSNNSWLVPVVIIVAVIGASALILWRAPWRRPPGT
>NC_009523.1|WP_011958516.1|4781404_4784266_+|hypothetical-protein
MLMRRAFARVLQFILSLMLLLAPVLAVQSAQAQTPLPPLVFVARSRLATGDYLFPRDVGPAGHMITGITKFAPGSKLLIRDQSGQLRVLVDTARPAGDPLNPLGLRDVQSPDVSFDARRVVFAGTFGPETFRNQPNGRPAYSWRLFEIGVDGRGLRQLTRSDREITIPDGPGNAEAYAFYDDLFPAYLADGRIVFSSSRYPARSPYDGRRAFNLYIIDGDGGNMRRLTTERTAAFHPAPLPDGRIVFSRWWVNFNQPSERGIYNRIDNRAGNEIARDQSGRPIVVERRIQVTATAQPAQPPQPAAPPPTPTMRLPSFVEKIDPATGSIVRLTKTPAPPTPTPRVRPTATPVPASQGGASRTIIVEQPVTGYRLPDGTLVYSNTNATFNPARGRLADGFPIRDAPNTWHLMAVEADGSGMSRFAWTPRYPSALTNDGGLDTYNAVQPAVVQFGGELLVAYTTQRDQTMAHSTLYTGIRVARPGIENMALNTTESIAGYRWDDGTSFRPPYALAPAGLPDGRIIFSQTAATTAPARTGVYTETRNGRTITLRLQSSSLRYELRTIYPNGAQNESVPLPGLSDEYDAMEARPIVVRPVGDGPGMWRLPRGTPPPVSDDPLQSNVPFGLLDTSGNPAYTWSRRSIQSVELVAVRNANVYANPPLEFPFINNSPPPGSVAFADIYIDANQFGGATSRAPNPDDQARAVKWLTVPVNPDGSFIASAPADVPTFIVLRDRNGRIVRGGNRHTLSIAQGNSAGRPGQPMFCVGCHMGHASGSIVNRQLAELGWTNIAPAASIAASSSVENGSPTRINDRRGYVAAPNGTLIDRTPPWTAKGGAGQWIRLEWQFPMAILEVRLVGAEPGQEGRSDDYQVSGELRFYLRGQEVAVAARTVEAVAPLSRGGTLMRLAQPIAADRVEFTVTAVRGTQRGAPASAALSEIEVIGQGATPDALGVGR
>NC_009523.1|WP_011958517.1|4784274_4785150_-|alpha/beta-hydrolase
MFHGFQPFRIQTQGATINGVHGGSGPPLLLLHGYPQTHLMWRAVAPRLADEFTIVAADLRGYGDSSKPPGGDDHAAYSKRAMAQDMVEVMQTLGFPRFMVAGHDRGARVVHRLCRDHPHAVIRAAVLDIAPTHYMYATTDRIFAEAYYHWFLLIQPCDLPERLIGADPEYYLRKKLAHWGRTSSAFEPEVIAEYVRCFSNPETIHATCEDYRAAASIDLQHDEADQHTPITCPLLVLWGAQGFVGRHYDLLTVWRQYAVDVRGHVVPGGHFLPEEAPDETYAALRAFFAGA
>NC_009523.1|WP_011958519.1|4785547_4785787_+|DUF2283-domain-containing-protein
MNNNLLRMVYFEQEDILHLTLSAEPEAGCVEISPHITAELNEQGELIGIEIMNARAFLRDVILETVQAKLLQLSRAPTA
>NC_009523.1|WP_011958520.1|4786025_4786796_-|enoyl-CoA-hydratase
MTLHITHNGPIATVTLDRPEVHNAFDAAMIVEMRAAFDALSGDEHVRVIVLTGAGESFCAGGDMRWMQSAMELTFEDNMADASALAAMFETIWTCPKVVLGRINGAAIGGGAGLAACCDLAIAADTARFGFGEVKIGLVPAVIAQYVVPKIGVSQARALFVSGERFSAERAFEIGLIHGVVPPEELDATVMEIAQRCLTSAPDAITTIKRVVDVVWESERLAAQRFVVEMLARVRTGNEAREGIAAFKARRRPPWA
>NC_009523.1|WP_011958521.1|4786792_4787458_-|hypothetical-protein
MTDAHPIPHDAVQSALTQLTGLADRADLPALVERAPIILSDDFFAAAQAAAADPAAAILRERLQWLAELRQQAEQDVPAALQAVVAATTLDELRQVVDHWPLTLTDAFAEAVEHLAQQFADAGHAEIADGLRQRLVGLAQLRVYRETWTETPQGKAIFAFLNAEDDAAALSVFHTHRDLLDHPEAQRTLDDVLHGGDPESQQRLERRRALLRYLRGEEQPQ

Crispr_ID: NC_009523_89

• CRISPR_ID: NC_009523_89
• CRISPR_location: 4887367-4887505
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_89

Consensus_repeat	Method
TTCTCTCGTTTTGGGCTTCAGGACGCCCAGACTCCCCCTTCTC	CRISPRCasFinder

spacers of NC_009523_89

>89.1|4887410|53|NC_009523|CRISPRCasFinder
TCCTTGTGGGAGAAGCTCACAGGGGTCGGTTTTTTGGGGAGCCCCTGCGTTCT

CRISPR arrays and Neighbor proteins around NC_009523_89

CRISPR arrays

The CRISPR arrays of NC_009523_89

>merge|NC_009523|89|4887367-4887505|CRISPRCasFinder
TTCTCTCGTTTTGGGCTTCAGGACGCCCAGACTCCCCCTTCTCTCCTTGTGGGAGAAGCTCACAGGGGTCGGTTTTTTGGGGAGCCCCTGCGTTCTTTCTCTCGTTTTGGGCTTCAGGATGCCCAGACTCCCCCTTCTC

>NC_009523|89|85|4887367-4887505|CRISPRCasFinder
TTCTCTCGTTTTGGGCTTCAGGACGCCCAGACTCCCCCTTCTC	TCCTTGTGGGAGAAGCTCACAGGGGTCGGTTTTTTGGGGAGCCCCTGCGTTCT
TTCTCTCGTTTTGGGCTTCAGGATGCCCAGACTCCCCCTTCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958590.1|4879701_4880688_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381308
NC_009523.1|WP_157041169.1|4892251_4894321_+|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NC_009523.1|WP_157041396.1|4894323_4897776_+|hypothetical-protein	unknown	unknown	gnl|CDD|238121
NC_009523.1|WP_011958592.1|4881720_4882167_-|FixH-family-protein	unknown	unknown	gnl|CDD|379037
NC_009523.1|WP_011958595.1|4884355_4884973_-|bifunctional-phosphoserine-phosphatase/homoserine-phosphotransferase-ThrH	unknown	unknown	gnl|CDD|237437
NC_009523.1|WP_011958604.1|4897788_4898970_+|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl|CDD|180261
NC_009523.1|WP_011958606.1|4899861_4900410_+|hypothetical-protein	unknown	unknown	gnl|CDD|381276
NC_009523.1|WP_011958609.1|4902020_4902530_+|molybdenum-cofactor-biosynthesis-protein-MoaB	unknown	unknown	gnl|CDD|238451
NC_009523.1|WP_011958605.1|4899302_4899695_+|dynein-regulation-protein-LC7	unknown	unknown	gnl|CDD|224929
NC_009523.1|WP_041335880.1|4887616_4889746_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|379080
NC_009523.1|WP_011958607.1|4900436_4901192_+|DUF4388-domain-containing-protein	unknown	unknown	gnl|CDD|373017
NC_009523.1|WP_157041168.1|4885175_4885805_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958591.1|4880708_4881698_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_009523.1|WP_011958599.1|4886940_4887174_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|226863
NC_009523.1|WP_011958593.1|4882275_4883271_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103
NC_009523.1|WP_011958594.1|4883267_4884203_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133022
NC_009523.1|WP_011958598.1|4886539_4886944_-|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350312
NC_009523.1|WP_011958597.1|4885801_4886146_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958608.1|4901209_4901743_+|ATP/GTP-binding-protein	unknown	unknown	gnl|CDD|225138
NC_009523.1|WP_011958601.1|4889790_4892211_-|hypothetical-protein	unknown	unknown	gnl|CDD|224720

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958590.1|4879701_4880688_-|aldo/keto-reductase	gnl|CDD|381308	cd19082, AKR_AKR10A1_2, AKR10A family of aldo-keto reductase (AKR). Streptomyces bluensis aldo-keto reductase (BlmT) and Streptomyces glaucescens aldo-keto reductase (StrT) are founding members of aldo-keto reductase family 10 member A1 (AKR10A1) and A2 (AKR10A2). BlmT is bluensomycin aldo-keto reductase (AKR) and StrT is streptomycin AKR.	1.66378e-134
NC_009523.1|WP_157041169.1|4892251_4894321_+|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	2.56351e-22
NC_009523.1|WP_157041396.1|4894323_4897776_+|hypothetical-protein	gnl|CDD|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.2395e-46
NC_009523.1|WP_011958592.1|4881720_4882167_-|FixH-family-protein	gnl|CDD|379037	pfam13115, YtkA, YtkA-like.	1.95146e-14
NC_009523.1|WP_011958595.1|4884355_4884973_-|bifunctional-phosphoserine-phosphatase/homoserine-phosphotransferase-ThrH	gnl|CDD|237437	PRK13582, thrH, bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH.	3.33831e-125
NC_009523.1|WP_011958606.1|4899861_4900410_+|hypothetical-protein	gnl|CDD|381276	cd14763, SSDgbs_1, Sensor single-domain globins; uncharacterized bacterial subgroup. This subfamily of sensor single-domain globins, belongs to a family that includes GCSs (globin-coupled-sensors) and single-domain protoglobins (Pgbs). For GCSs, an N-terminal heme-bound oxygen-sensing/binding globin domain is coupled to a C-terminal functional/signaling domain. The first signal O2 binds to/dissociates from the heme in its sensor domain inducing a conformational change in that domain and ultimately in the signaling domain. It has been demonstrated that the Pgbs and other single domain globins can function as sensors, when coupled to an appropriate regulatory domain.	7.5644e-53
NC_009523.1|WP_011958609.1|4902020_4902530_+|molybdenum-cofactor-biosynthesis-protein-MoaB	gnl|CDD|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	3.21057e-64
NC_009523.1|WP_011958605.1|4899302_4899695_+|dynein-regulation-protein-LC7	gnl|CDD|224929	COG2018, COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only].	4.38422e-19
NC_009523.1|WP_041335880.1|4887616_4889746_-|tetratricopeptide-repeat-protein	gnl|CDD|379080	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.	1.84883e-08
NC_009523.1|WP_011958607.1|4900436_4901192_+|DUF4388-domain-containing-protein	gnl|CDD|373017	pfam14332, DUF4388, Domain of unknown function (DUF4388). This domain family is found in bacteria, and is typically between 102 and 135 amino acids in length.	6.38368e-19
NC_009523.1|WP_011958604.1|4897788_4898970_+|acetyl-CoA-C-acyltransferase	gnl|CDD|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NC_009523.1|WP_011958591.1|4880708_4881698_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	7.26211e-68
NC_009523.1|WP_011958599.1|4886940_4887174_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl|CDD|226863	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].	5.31808e-17
NC_009523.1|WP_011958593.1|4882275_4883271_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	1.89351e-16
NC_009523.1|WP_011958594.1|4883267_4884203_-|glycosyltransferase-family-2-protein	gnl|CDD|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.64022e-56
NC_009523.1|WP_011958598.1|4886539_4886944_-|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350312	cd18745, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.88558e-60
NC_009523.1|WP_011958608.1|4901209_4901743_+|ATP/GTP-binding-protein	gnl|CDD|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	1.31433e-48
NC_009523.1|WP_011958601.1|4889790_4892211_-|hypothetical-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.22038e-11

Protein sequences

>NC_009523.1|WP_011958599.1|4886940_4887174_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MDTARIFRNGQSQAIRLPKEYRFRGDRVYLKRMGNAVVLLPEYDSWQTLIESLSMFSDDFMAERDQPPIQVREHLFE
>NC_009523.1|WP_011958598.1|4886539_4886944_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MKYLLDTNICILLIRQKSQAVLQRLTRLPLTDVAVSAITVAELRYGVAKSRYVAQNQQALDYFLLPLTILPFDEKSAMTYGEIRAFLEAQGTPIGAIDTLLAAQAVSCRLILVTNNVREFARVPGLTVEDWSQP
>NC_009523.1|WP_011958597.1|4885801_4886146_+|hypothetical-protein
MIHEEIERLLTAYETDVRFPEASGMELLDMLLKRSEIAQADREQLLTVEQRRRLAAADRVLALQARHFYASIQRIADLEVWRQHEGAPPGEWWWYLDVLAHTPVVAADDTPVPA
>NC_009523.1|WP_157041168.1|4885175_4885805_+|hypothetical-protein
MGVLMPETGDGTQELQKTYPYKPAGGGLHGEDRMLHGAHWREKDGIAMIRCCIHRLCRISVLFCEPNVPEIVLAVGYGILKSEVFMNDMRSLVKRAIKSVQSGIRWRHDSAAQHLVKRKARRQLPANATLAAYEQIITTIVHDPQARVFVYWHDQRAYPTVVSVIGGEHWLVMLDESGSLESAFVIDRPERYLMRPQFQETGVLEEILR
>NC_009523.1|WP_011958595.1|4884355_4884973_-|bifunctional-phosphoserine-phosphatase/homoserine-phosphotransferase-ThrH
MTQPTILTTDLEGVLVPEIWIAVAERTGIERLRLTTRDIPDYDELMRGRLAILREHRLTLADIQRVIGAIDPLPGAVEALGQLRQQVQVIILSDTYYEFAMPLMAKLGWPTLFCHSLDVDDQGMITAYRLRMPDSKTAAVRALRDIHFRVLAVGDSYNDVGMLAAADAGALFDPPQNVVADFPHFPVLRGYDDLLAFVERETERE
>NC_009523.1|WP_011958594.1|4883267_4884203_-|glycosyltransferase-family-2-protein
MTAELLSIPDTDAEPDAPRHWPFSISVVIPAFNEGPRVGSVVRAVRAQVPDAEIIVVDDASSDDTAAQAASAGARVISRPHNLGNGAGVRTGIRAASGDVVIVIDADGQHNPADIPRLLRHLDRYDMVIATRPDRDSHENLVRWFGNSVLNALGTYLSGFPMRDLTSGFRAMRREVMLEFLHLLPNTFGWPMTSAMAFAKAGYHIRFEPVMMNKRQGGRSSQKLFKNGVRNILIMLRMVSMFAPLRVYFPVALAMFALSLLSFAISYFITDIGRFRVPNSSVGLFVGAIVVFMFGLLAEQIAGLRFQRRDL
>NC_009523.1|WP_011958593.1|4882275_4883271_-|flippase-like-domain-containing-protein
MKHSLRWLLRLIGPALLIFFLWRSDPAALVAALVGIDPGPAILSLALMPVFIWVKAWRWSIIVREQGHTPPSLNDLAALYAIGLYAGGITPGQSGDFIKAWYLRERGVPLAPGLLSILLDRLFDFVIWAVMAVLSLAAFIDVFPAETRGVVQLATVGFAAAVLIATPGLMARAPREWALGLAIPLAPARLRAALERLRDQFAPLSLRFTPLLLLLISTIGSATSTFVRIYLMYLALRLGDIPLLEILAATGLIAILQALPISFAGVGVRDAVLIAMLQRHGHAAEIALSLSALFLLINIQHILIGFLVSLRYPLGEAPSDVTKTGGGDVEG
>NC_009523.1|WP_011958592.1|4881720_4882167_-|FixH-family-protein
MKSPHHVTPVHAGCVFWLAFWRASARAIIFIALAACGAAPTIVEHRVVDGLTISLERPAQPIALRDYAFVATITDAGDQPVEATLVYFDFTMPQMEMGVHQPIADRLGPGKYGVRTLYSMEGDWRITVVATIDGRDIRAWFDHPVLPP
>NC_009523.1|WP_011958591.1|4880708_4881698_-|Gfo/Idh/MocA-family-oxidoreductase
MTHQPVRWGILSTGRIAGVFAEALQSIDDAHLVAVGSRSADSAAAFGDRFDVPRRYASYEELAADPDVDIIYNATPHALHYENCLLCLNHGKAVLCEKPFTINARQAAEVVAVARERGLFLMEAMWTRFLPAIVRLRELLAQGVIGEVRMIASDFGFRAGVDPQSRLFDPALGGGSLLDVGVYTVSLASMVLGGEPERLATLADLGSTGVDEQAAMILGYSGGRMAVLWSAIRTETPHETTIMGTGGMIRIHPQWWRATSLTVHRSGQGDEAIHLPFNGNGYQFEALEAMRCLRAGLSESQVMPLDETLGIMRTMDAIRAQWGLKYPME
>NC_009523.1|WP_011958590.1|4879701_4880688_-|aldo/keto-reductase
MLYGHVPGIDKPVSRLVQGSVMVSTRDLEGSFRLLDAIFALGCNTFDTAHVYGQGDNERAMGRWVHERGIRDQVVIIGKGAHHNADRKRVTPFDITADLFDSLARFKFDYIDLYLLHRDDPSVPVGPIVEVLNEHLAAGRIRAFGGSNWSHRRIAEANEYAAAHGLTPFVASSPNFSLAEQYREPWEGCISISGPQNEEARAWYAEQRMPLFTWSSLAGGFFSGRLRRDNLDTFEDYLDKLAVYSYAGEENFRRLERVQHLAEEKGLSIPQIALAYVMSQPLDIYALVGCRTPEEFAANLVALEVRLTPEECAWLDLRLEERGGVVEN
>NC_009523.1|WP_041335880.1|4887616_4889746_-|tetratricopeptide-repeat-protein
MITRELTNMAGSRVSPITATYATLALLVVASIALRLWFISVNPLDPRYSNADDGDYYRRALRFAVTGAYVDDAWLIRPPLHVFFFAFWLRVALILGVPQLGLLFIQLAQTALAAVMTLIGFGLARRLFASMRAGLLFAGFLALWYPLIEQTTVLFSEHLYLFFFLLHLWLLVRYDQEERLRDLALAGAALGAAALTRSPALYAVVFVVGWLVVRAATSGAASRWQATKGALKPALLVVAACLAIVAPWTARNYLTYGHLIPVDTLGQINLWLDLDDMARRNANIDTLQLLPQSERHIYALERAREILAADPLRPFRSMWDTFRHIWKAQFIEDYFVKRGFFTRPLRETAPLGLIGDLMWLACTVTGFVGLAGRVREGIHFRLFFLAWIGYSLLTVLIFHVEPRYLLPLWMMIALYGAGMLGAPWNRVRWTPHLAVQVVVVAAFFWLLLTYRDYPAIIASGIARERAMITGMSAYRSGDYSAAERAFRVALTAQPNFVDAQVHLALALKAQGRYEEALASLQRKSSRRAELVFGVLLREIGIPMQAAPILTYIEMTAGEAIQQWALEWLRPPPVDILVVGNGLDIGYLAGFSPAEQGAIGGFRWLEGQGVLVLPLAEPLRDDAVLLLSMTGGEAEATTPLTVRIGDGAAWSVPVVRGEWRRYHLLVPSEHVTDQRIVIELSAPTFVPARLDPASNDARALSLRLSRVQVR
>NC_009523.1|WP_011958601.1|4889790_4892211_-|hypothetical-protein
MSMEYDTLPQRMRQYMRTAAGGKTAMQSLAALMWAVRAIAASLAGMALVMILCQIPVTHHIDVGRFDAAYVRGFYDPERLDLPQARAYLHGSDGSARWTRAESYLLLPQAGLPAEVTIRLRGWRAGGTLPDFAILVDGHEMYAGATTGEWQEVRIPLRRVSLKPEDVLITVRSDVAPISAGDPRLAGVLVDTVVYRTAQPPLQPYPAQMAWGALAGGLLFLALTGVRGGGTVRWLRFVAPLRAWLVGMLLIGVLYLFFYRLQLAYPYPLRGLLPGVCALLGAIVTLRYSPALAARLPVLPDVLAVSGIAVWTMAVLLAAQDHVTLSVPGVEKDFRVFATRAVDLALVLRADGFYNLGYPFLIWLFAPLTAGNPFLAARLIAALAGMLMLGATWWLARCLLGRGPALAALVVLGLNPFVVQYALYVGSDMPFAALCTLALALLASHRIRGSLWLAALAGGVAGCAFLVRHPGILLLPFGVFALLWMRREAREARGKPSTFHALVFAFAFSIAAAPQVVVNLRDTGHPLYNQQAKNVWLAVYGDSDWGRWNEVSNDVSLTDVILEDPGRFVGAWWTHLRAFIGSGAETADDAGRASQLRLLAFPANWLAVIGLAGWLVILVYHGRKALFRSHGVEEFPPALPLFAIPLLIWVTLHTLALAVGLPLQRFFLPLAPVYAVAAAWTLLITVRALARQRALTPVRLQIGVILILLLVLQSGFALGVRDVIDRQPADEVAAVRLVQQTLPPEESLRVVLAPGDPVGKYSAIAHRVAPPDRATRYLLHSAEAGAIPDGAVIAIAGKYALVQVRP
>NC_009523.1|WP_157041169.1|4892251_4894321_+|CHAT-domain-containing-protein
MKSYVDFEIALTPAESGRFFLKARGPRGEEGDGELLLPDADPQIQALLTRLRLLDVDEATLVQLGRALFDALFNGAVRDVYVRCRGALASDEGLRLRLNIPPSAVSAALLPWEFLYDPDRGPLSLLDAPVVRHLPQPDRIPPLTAPLPLRVLLTAAQTPPPTAVERELTAVQSALERFGDQVATTVEPHLTATILQNRLREGYHIWHFVGHGGFTSDGATACLLFEDDLGDPEPVSALQLGIMLDRSNLRLVVLDACSTGQLATDPMRSIAPALIRAQIPAVVAMQFQVPEEATCAFARAFYHALADAFPIDFCVTEGRRAVMNITGLGRADWGIPVIYTRTEDGRLFNPPTAPPPSSVAAVTARSVGTGMQALEHLIQAGSDVREAVIAFRADLHAVARQIDMLADYKDVHDQLHSLQFHCYNPIVIDMRRLPDDDLAWESIANYDVTLQSIVRDLDQIVRRGRLPASELSWVNDVQSAQVDIAGSIDAGDLKLLKKAVRLLNRALTTQPSLINARLSTTARTLRLASLVEGMTAVRDRLASTGYDAARVSQIELGVTALATLSASLASLVDDHDRWQIIDLELRRIEQFIDQDITELELSWPEVHQRVAPFYLENAEPWGAALKNDADKLTSALEAADPTRVRQFFRRFRRQAGERFFRVDIELKRVCDELRLIGESLTSVLKVLTV
>NC_009523.1|WP_157041396.1|4894323_4897776_+|hypothetical-protein
MTDHPPPEPSRDHEVLAFPSFAALRAAHAEMLRRLHEEGLTTALLSRAAEMIARGSATGVILDDEDERTAAQSLLDYWATILIRKGYEPPDATLDEFDPSLAPELDDSQCPYVGLDPFREEDAARFFGRRRLVEFLVARLTEHRMLALVGPSGSGKSSVVRAGLIPALKQNAIPGSSAWRYIPIITPGEQPLFHLAHAWRRLNGQPDDQAQSEELAERFRDPQQVVAAFDGTEAVVLVVDQMEELFTLTDDESERRAFVAAMVALVEHPSPRHTVITTLRSDFESFIALEPALQQWMEQARVQLLPLSAGEMREAIERPAELVGLKFEPGVVEALLHDTLGEPAALPLLQFSLLKLWDARDRNRVTWQAYQQIGGGRQALARSADALYNSLIPEDQVTARRILLRMVRPGEGLEITSNRIRRDQLYRAGEARDRVDRVLERLVAARLVRLTPGDTPGSAQVEIAHEALVRNWPTLVGWLEDERAAIATRRRLEAKAAEWVRLGGGAAGLLDEVQLAEAERWLNSAEAAYLGFDEALLDLVIASRTAIDQARHAQEDQRRRELEQAQALAEARRLQAEQNEKLAIEQGKRAEAEARSARRLRLIVATLTVALIGAIMSGILLLQQQSQIQERTFELATQVSISDQAAATARIAAANAQAAAATSQAAESLALLRGTQAALAAAQESQARQTAEALVPALERQARQARAGQLAALAQAKRDERPILSLLLAIEAVHITLQKGEAPVPVADAALRDSLTRIGGIGLLIGEPVVAAATSDDGRVAVAMTANGTLSIWNLTDPGLPPRVVNTPGSPTLLVLSRDGARLATTGADPTSVRLWDLSGTMPVARELAAPGGINTALAISDNGRQLAIGDDQGVVLVYDLTNPSATPQRLSGLGGRSAVRSLAFSPDGQLLATGNADSQARLYNLASGSGSYTRERTRGALTSITFSNNGRWIVYGSADGQVRLWRLSGAQFDSAYVLLGLTAEVTDVRIAPGDRLIIAGSADGTTCIWDLEARSDNRARVVLRGQTARITGLALNGNASRLATAGADGRIALWNLTAADPGVNPLIMRGHDGPVNDVAIPARTSLMLTVGADGMARVWNLDAPLYALKTLPQESVELLEVACRAAGRTLSESEWSEYVEGLPYNPFCK
>NC_009523.1|WP_011958604.1|4897788_4898970_+|acetyl-CoA-C-acyltransferase
MPDTNDIVIIGAARTPIGKFQGMFRAISATDLGAHVVREAVARAAIDPSQVDECILGNVVSAGLGQAPARQAALRGGLPESVGALTINKVCGSGLKAVTLAAALIRSGEASLIVAGGMESMSRAPYLLPQARSGYRLGNAELIDSLIHDGLWCAFEHHHMGHAADWTAQTYGIAREQQDSYAAESQARAVAAQDAGAFTDEIAPFRLQSGDILTTDEPPRRGVSLATLSKLLPAFSPDGTVTAGNAPGLTDGAAALVVTSARRAAELGVRPLARLTGVAQAAVAPREVFTAPVYAIRRLLAQTATTLDHYDLFEINEAFAAQIVQNIRALNLDTDRLNVHGGAIALGHPIGASGARILVTLIYALLRRGGGRGIAALCLGGGEAVAVAVEAAP
>NC_009523.1|WP_011958605.1|4899302_4899695_+|dynein-regulation-protein-LC7
MASRQEQITAIIDQLMTNTGTDVVGAAAVGLDGIALASRMSSEVSNERLAAVAATIMGVTRRVGNELRIGFAEEIIIKANKGLFMVLPAGDQSLLAISLRQDANLGLVRLEARDAARSIGQILTMVYSPN
>NC_009523.1|WP_011958606.1|4899861_4900410_+|hypothetical-protein
MSVDRSSWQIKDEAVLAELVQLMNLSADEAAILKSLHDAAQKQAPAMREDFYKRLLAHPQTAEYFSNINMKHMYETLQNWFVELFNGVYDETYARRRITIGRVHVRIGLPVRYPIAMLDVAMAHAEAVARTHPQPDAAMAAVRKVIALDVAVFNQAYEDRQIQILADTVGNERLARRLLSEE
>NC_009523.1|WP_011958607.1|4900436_4901192_+|DUF4388-domain-containing-protein
MALEGTLRDMSLSDLFHVFRMGPKTGVLLLASASSRAIVYVAAGTLIDAAVVRLPDRVVVAAQDEAVIQMLLWDDATFVFRHDPAVAQRPVRIRHDAEHLILESMKRRQNLQAALPYHHITLDTSLQLSPLTSGRESNVILSVDQWRLLSQIPHCPTVRAISAATGIPPDQTIRLVLELMAIGLIEIVPTRRPASPSAHRREMFATETEEQAAIPQLMMQPGSHAQPVAHERRMPVRRSLIDAVMRRVRAL
>NC_009523.1|WP_011958608.1|4901209_4901743_+|ATP/GTP-binding-protein
MQIVKIVITGGYAAGKTRFIRTISDIEPVSTDYAVTTEEERALKHETTVALDFGVIAINEHLSLYLFGTPGQERFDFMWEHLAFGALGYVVMVDSCRPAHFAETQRLMDRFASITDVPFVVAANKQDDETALPPAYIRRRLGVPEDVPVLPCVASDRSSVKRVLLSLLHLIAERVQD
>NC_009523.1|WP_011958609.1|4902020_4902530_+|molybdenum-cofactor-biosynthesis-protein-MoaB
MSHTVHEQIARSAVPSVTCGIITISDTRTPETDTGGALIRTMLEGAGHQVARYIVVKDEPDQIVAHVREFADAGCQVIITSGGTGIAKRDSTFEAIDALLEKRMPGFGEIFRVLSYQDIGPAAMLSRATAGVFQRSLIFCLPGSPAAVRLAMEKLIVPELAHLVWETIR

Crispr_ID: NC_009523_90

• CRISPR_ID: NC_009523_90
• CRISPR_location: 4977816-4977919
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: csx1

Consensus repeat of NC_009523_90

Consensus_repeat	Method
CCTGCCGCCTTTCACCTTTGCACCT	CRISPRCasFinder

spacers of NC_009523_90

>90.1|4977841|54|NC_009523|CRISPRCasFinder
TGCACCTCGCTGCATGCTCACGCCTGTGGCGGTGCAGGCATCCGGCGATGTGCA

CRISPR arrays and Neighbor proteins around NC_009523_90

CRISPR arrays

The CRISPR arrays of NC_009523_90

>merge|NC_009523|90|4977816-4977919|CRISPRCasFinder
CCTGGCGCCTGCCGCCTTTCACCTTTGCACCTCGCTGCATGCTCACGCCTGTGGCGGTGCAGGCATCCGGCGATGTGCACCTGCCGCCTTTCACCTTTGCACCT

>NC_009523|90|86|4977816-4977919|CRISPRCasFinder
CCTGGCGCCTGCCGCCTTTCACCTT	TGCACCTCGCTGCATGCTCACGCCTGTGGCGGTGCAGGCATCCGGCGATGTGCA
CCTGCCGCCTTTCACCTTTGCACCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958671.1|4985743_4986481_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009523.1|WP_157041172.1|4975983_4976139_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958658.1|4966078_4967623_-|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|223613
NC_009523.1|WP_011958667.1|4978645_4981852_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223627
NC_009523.1|WP_011958659.1|4970060_4970219_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958676.1|4990125_4991415_-|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173812
NC_009523.1|WP_083763330.1|4988554_4989748_-|DUF1887-family-protein	csx1	pfam09002_csx1_CAS-III	gnl|CDD|312526
NC_009523.1|WP_011958670.1|4984673_4985648_+|protein-translocase-subunit-SecF	unknown	unknown	gnl|CDD|237275
NC_009523.1|WP_011958664.1|4974911_4975181_+|DUF2203-family-protein	unknown	unknown	gnl|CDD|378330
NC_009523.1|WP_011958657.1|4965563_4965737_-|50S-ribosomal-protein-L34	unknown	unknown	gnl|CDD|366117
NC_009523.1|WP_011958660.1|4970215_4972081_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958668.1|4982037_4982799_+|DsbA-family-protein	unknown	unknown	gnl|CDD|372611
NC_009523.1|WP_011958663.1|4973805_4974906_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl|CDD|225224
NC_009523.1|WP_011958672.1|4986641_4987757_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl|CDD|236585
NC_009523.1|WP_011958673.1|4987844_4988558_+|metal-dependent-transcriptional-regulator	unknown	unknown	gnl|CDD|224240
NC_009523.1|WP_011958669.1|4983253_4984660_+|protein-translocase-subunit-SecD	unknown	unknown	gnl|CDD|235615
NC_009523.1|WP_011958662.1|4973029_4973821_+|GlcNAc-PI-de-N-acetylase	unknown	unknown	gnl|CDD|376836
NC_009523.1|WP_011958661.1|4972093_4973023_+|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|224331
NC_009523.1|WP_011958675.1|4989760_4990129_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958665.1|4975177_4975954_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|223943

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_083763330.1|4988554_4989748_-|DUF1887-family-protein	csx1	pfam09002_csx1_CAS-III	3.1e-24	80.0	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_083763330.1|4988554_4989748_-|DUF1887-family-protein	gnl|CDD|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	2.31987e-19
NC_009523.1|WP_011958663.1|4973805_4974906_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl|CDD|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	2.84507e-44
NC_009523.1|WP_011958658.1|4966078_4967623_-|S1-RNA-binding-domain-containing-protein	gnl|CDD|223613	COG0539, RpsA, Ribosomal protein S1 [Translation, ribosomal structure and biogenesis].	2.9697e-65
NC_009523.1|WP_011958671.1|4985743_4986481_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	8.7786e-23
NC_009523.1|WP_011958667.1|4978645_4981852_-|DEAD/DEAH-box-helicase	gnl|CDD|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.43695e-109
NC_009523.1|WP_011958676.1|4990125_4991415_-|S8-family-serine-peptidase	gnl|CDD|173812	cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.74842e-50
NC_009523.1|WP_011958670.1|4984673_4985648_+|protein-translocase-subunit-SecF	gnl|CDD|237275	PRK13022, secF, protein translocase subunit SecF.	2.15948e-92
NC_009523.1|WP_011958664.1|4974911_4975181_+|DUF2203-family-protein	gnl|CDD|378330	pfam09969, DUF2203, Uncharacterized conserved protein (DUF2203). This domain, found in various hypothetical bacterial proteins, has no known function.	0.00223508
NC_009523.1|WP_011958657.1|4965563_4965737_-|50S-ribosomal-protein-L34	gnl|CDD|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	2.91914e-08
NC_009523.1|WP_011958668.1|4982037_4982799_+|DsbA-family-protein	gnl|CDD|372611	pfam13462, Thioredoxin_4, Thioredoxin.	1.72922e-40
NC_009523.1|WP_011958673.1|4987844_4988558_+|metal-dependent-transcriptional-regulator	gnl|CDD|224240	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription].	3.66072e-52
NC_009523.1|WP_011958672.1|4986641_4987757_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl|CDD|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	2.24726e-168
NC_009523.1|WP_011958669.1|4983253_4984660_+|protein-translocase-subunit-SecD	gnl|CDD|235615	PRK05812, secD, preprotein translocase subunit SecD; Reviewed.	5.71222e-124
NC_009523.1|WP_011958662.1|4973029_4973821_+|GlcNAc-PI-de-N-acetylase	gnl|CDD|376836	pfam02585, PIG-L, GlcNAc-PI de-N-acetylase. Members of this family are related to PIG-L an N-acetylglucosaminylphosphatidylinositol de-N-acetylase (EC:3.5.1.89) that catalyzes the second step in GPI biosynthesis.	4.61319e-08
NC_009523.1|WP_011958661.1|4972093_4973023_+|HEAT-repeat-domain-containing-protein	gnl|CDD|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	2.3609e-09
NC_009523.1|WP_011958665.1|4975177_4975954_+|HAD-family-hydrolase	gnl|CDD|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	1.60409e-31

Protein sequences

>NC_009523.1|WP_157041172.1|4975983_4976139_+|hypothetical-protein
MTKKLRASAMVMLDNETLTTSSSSSTLRAPALRQPRFNLAKAGSIGGKAGE
>NC_009523.1|WP_011958665.1|4975177_4975954_+|HAD-family-hydrolase
MIRAVIFDMGGTLLQYPRPGNGAWREFEERGIRGLYRYLVAQGHPIADGEEAFVARMFERLAQGWEQATGGHINLRAVDWIAAGAADHDLDLPESTLIEAVHHYARPLRDGVSAMPGAAMALAELRARGIHTGLISNTIWPGDLHREDLMALGLWSSIEYAVFSGDLGIWKPRPQIFLHVLEHFGVSPAEAIFVGDSPKEDIRGAQQAGMRAFWVRSPEFPLPPDIHPDAIIENPGEIVPLLEASGQLPPRSSVSRKG
>NC_009523.1|WP_011958664.1|4974911_4975181_+|DUF2203-family-protein
MEPDENLTLDEARRLIAYLQSELERQRALNAEMRRAVADMARAFQESLARSHQAAMDGDLERVRQIVIENRRVWQDWLRQIIEAAGRKQ
>NC_009523.1|WP_011958663.1|4973805_4974906_+|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MADCVIERHPERVSLTVAMTVVTPDPAAWDAFVAAHPDGHLLQSSRWGALKGRFGWKPHLRAVVAGETIQAGALALEKQRLALSALYVPRGPLFSGDPSIDALLLDDMIRLGRRRRAVFVRIEPNITEDDPRAATLHSFLLDRALQPTPPIQPRSTIHLDLTPEPERLLAGMSKGHRADIKRALREGVEVREGGTPADLDAFYAIMQATSARAGFAIHSPAYYAAVLELFGDAVRLWLAEYRGAPVATAMTAVWGAMAIYLYSGSTTDGLQCGAQHAIQWRAIQWARARGAARYDFWGIPDAIGQAAGTADPAARARLDAAAQHDPLYGVYRFKKGFGGITTRYLPAYDQVGMPLLYALWRRHAIG
>NC_009523.1|WP_011958662.1|4973029_4973821_+|GlcNAc-PI-de-N-acetylase
MNTRPTDLVNRVDLARYTRVYLSPHLDDAALSCGGTIAASPDRALVITLCTAPPSETNFNAVAVEFHAEWGLAPDEVLRVRRAEDAEAMTILGVDYVYADWLDAIYRMPEAYHSRATLYRHPLSDDPLLPQVRDLLALLIAHAPQATIYVPLGVGHHVDHLAVFESAVAFPPDRLAFYEDINYALLPGAVEQRLAEIGPTLVAEYLAFGASSFQKKIAAIAAYRSQMEALFGGTVAMEAAIAAYHAMLAQERDGYAERIWRIA
>NC_009523.1|WP_011958661.1|4972093_4973023_+|HEAT-repeat-domain-containing-protein
MDLAAHLRALASREHLSMRELRPLSGLGPDAYDALWETWQRIPVRRRTEIAHAMVELAEDNIDLDFTMMFRWLLDDADPEVRASAVEGLWECTDVPVMRRLLALLCDPADQVRAAAAMALGRFAYMAEIDELDEEYGRQVHDALLTLIHDASQPTEVRRRAIESAGYFAASNDVQRQIELAYASSDQLMRESALVAMGRSMLPRWLPIVSRELESPSPALRYEAARAAGEMADIARSLVARVVRLCSDADTEVALAAIWALGQIGGETARRTLQHISGSEDEARSQAAAEALDELTLEEGFFESEWRNN
>NC_009523.1|WP_011958660.1|4970215_4972081_+|hypothetical-protein
MIERPTFTGNEEQRSLAEEIFHLMTAQGRLFALDTPIHQTLRNLADFYARQRQIDPEEAARLIDEALRVNSQVFTRQENNGDVIFITSRRGRYVPPQVDTVHTFKQRLHEPENPLPVDDISVVVTTTRPALTTVEPVFISEYWQQQAGLIPVTVEAPVETPATAVDETPPVEEPVASGPVAGEEQVTAPPVVPPTGPAQVNTVIVLPNGLQIDLRRPVEELMAQHGQTLMSQLRAAIENDPLRRLVLFGNQAFPEAALVSFGKNDLRRISDYIKEVGEPLLDTQIIADIFYHNPRQSDYEIFRFALNYRLSREKDFEFVGVEGARLWSVRNLPAIGTRRVKASEMGQLAGYIEEGFDDSLAEQSVEAIRKTGQVNHVLTFFEWEYGILPLTRALSALLPQPLLADQRSAVLRFELPQHYVSALVELRYPTGNRGGWLQGLETLFHDYLVPGALITLMRTDDPRTFAITYEEQAETQDRLLVLDETKKTPKFTFANISFACVVDTDMLVNQQQYGRLRNLKAFPMNERRKADLMLEHVFEVIGTPVGTRTEPQYAAPFDALFVAMNVLRPVSREYLTHLLTDGDNFTPDEGRPGWWRYTPPPSLAKEDEDDKTDEEDFDDEE
>NC_009523.1|WP_011958659.1|4970060_4970219_+|hypothetical-protein
MMDGKNIIYGETAMDKLAQQVRATGQPQDLQSLTERYLEILRELVLAGEQQA
>NC_009523.1|WP_011958658.1|4966078_4967623_-|S1-RNA-binding-domain-containing-protein
MTDQERPVEERNELPGDLPAAAPGVAVVEAEAPPQQQAIESPSPPTAETTGDAGGRKADGGVASSPPTAETAGDAGGHAADEGVASSDGSEGEETDHADASPVTDDAGSASAAAPPAEEASYQAPAEETPGRPRRVKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVRVKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTFKVLEVDAAGARISLSLRRAQRGQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTHVARVEDVVKVGDRVQVRVLDVDPQSKRISLSLRLEDTPRELPPREERPREERPREERPREERPRGERPRGEGRPPREERQSRRTGERLPETYRSADNEDDFSGNATIEDLMSKFGGSRRNERRRRQEDDDDMDDRHLRRQRDAIRRTLQQLDDE
>NC_009523.1|WP_011958657.1|4965563_4965737_-|50S-ribosomal-protein-L34
MPKRTWQPKRIPRRRKHGFLARMATKDGRAVLRRRRLQGRYRLTVSDERRQIRRGHR
>NC_009523.1|WP_011958667.1|4978645_4981852_-|DEAD/DEAH-box-helicase
MWNILSADILDIDHILLSTSQTVVQQGRRYYERGQVEVERVDTDSALINVFESPGVAHQVVLRLHNRQIFVSCTCPQRHYWTFCRHRVAAILALRDYLIAHPPSIWRAVIGEAVRAQPQRKPTAQPACIVFSLQYASTAWTIVPYAIPLRRLPPEALGDQEELAAAIAALNLSHEARLIRSRISRQTYPHASFETIIAVNMALATAEGFLYHYTSDDESGAVYDPLLLLLAGQLAYLGDEGDPLQHRIRIMTDPASVELRIEQNDRDAIRMRLHLNVAGESIPLDPRTTYVFSNSPLWLIVDDRLIPVSDPHGVAALLINHPDLTIPAHEQDEFFDQYLLPLAERMTLCGDLLRWEEIDVSPTPRLYLSETNGALLADLRFAYGEFEVPAEVNPPPYVVRRQANTFTLIRIRRRPEEEAALLRDIGSPTYGLKKGAEIGRFELRKAVHPLDFLIHRIPMLTRQGVEVFGEDQIKAARVNRNQPQISFRVSSGIDWFDLEAVVRFGDLEASLKEVRRAIRRRQNYVRLADGAIGVIPDEWIERYRHLFELGEDTETGVRLTRGHLTLLDQLLAESDHVQTDEEFERQRERLRSFERIQDQPLPRGFRGELRHYQRAAYNWLHFLNEYGFGGCLADDMGTGKTVCTLAFLQSLEERDPDGPASLIVMPRSLLFNWEREAATFTPDLRVAVHHSAVRSLNPAQFDRYDLVLTTYGTMLRDIELLRRYRFRYVILDESQAIKNPLAETAKAARLLNAQRRLALTGTPVENSTLELWSQFAFLNPGLLGNLDYFRETFVTPIEKKQSADAAQFLRKLVYPFILRRTKDQVAPELPPRSERVIEVEMEPAQRRLYIKQRDYYRALLLGLIDNAGIDNARMQVLEGLLRLRQICNHPRLIEPDFRGSSGKFELLIETLETLAAEGRKALVFSQFVQMLTLIREALDARRIPYAYLDGQTRQRQQEVDRFQSDETLPFFLISLKAGGVGLNLTAADYVIHVDPWWNPAVEMQATDRTHRIGQEKPVFVYKLVTRDSVEEKILHLQNRKRELVEQLITADASMLKALTREDVEALFG
>NC_009523.1|WP_011958668.1|4982037_4982799_+|DsbA-family-protein
MSTRSQRGRAVQTKKSGGASRALYLVMGAAVLLVIAVAATIALQNRQSAATATPGRDPARPATGVATGVGADGFFFKGNADAPVTVTEFSDYQCPGCAYYATILAAQFEQEYVATGKVRFVYHEYPLNGHINGVPAAIAARCAGEQGADNYWAMHDYLFTNQRQWSGQPNPQAQFVAYARQIGLDTAAFERCYTSNRFRDAINQAKASGDALRIPGTPSFAVNGQLVDTTGASSVEEIYVRMRQAVDRALAGQ
>NC_009523.1|WP_011958669.1|4983253_4984660_+|protein-translocase-subunit-SecD
MRSRDIYSLIFILLIAGIALSIVFAPEGRWLFNRDVSVRLGLDLRGGIQVLLRAAEPVERSVMQTAAGVIERRINGLGVAESVVQLSGNDRIIVEIPGIDNPEQAIETLRGTGKLEFIDTKGEFLAPGTIVRTTGSPNPVALRPTATVTGTEEITPTVPEGPIYESITDGKDLDLNAVQPPQIAGQSLTNQFAVPFAFTGESARRLEQFTAANIQRPMCIVLDNQVFSCPVVQAALIGGRGEITTSTRQDAEQIYTQLKYGALPVPLQVESSRTVSASLGQGSVDASIVAGLVGLLTVALFMILFYRLPGFLATVALLLYTVISFALYQLIPVTLTLPGIAGFILSIGVAVDANVLIFARLKEELRHGRSLNASIDAAFVEAWPAIRDSSVATLITCTILFMFGNTFGVSLIKGFALTLGLGILLSLFTAMVVTRTFLHVINPLPFAQNPWLYELRDAPGMRHAREAA
>NC_009523.1|WP_011958670.1|4984673_4985648_+|protein-translocase-subunit-SecF
MDKLVKLRYWWFALSLVIIIPGLVSLAIFGLRLGIDFSGGALWDIQFVERAPGQLDTERIRAIFAAQGFEGALVQLTESQVDGRTVASAVVRTRSLSETDPETQRQRVLSALSAEYGTVNQQALQSVGATVSAESTRSAVIAVIAACVAILVYLTLAFRRAPHPVRYGICAILAMIHDVLLVLGVASILGVVIGMEVDALFLTALLTVISFSVHDTIVVFDRIRENLVNRRPTETFDDIVNHSIVQTLPRSVNTQLTTFFTLMALILFGGESIRNLVLILLIGLVSGTYSSIFNAAQLLVVWENREWSRWFRRSAPPGAEAPAA
>NC_009523.1|WP_011958671.1|4985743_4986481_-|class-I-SAM-dependent-methyltransferase
MSLQTNKRQWEDLGQVDPFWGMTGTNRFGGWDVEAFLQTGEEQVAQVMQQIEHWDRPSHWSTVLDFGCGVGRLAAAFRRRFEHYVGLDISESLIVKARQIHATLTCADFIVSASDTLPIASNSCDMVYCWGVLQHVRNRARALRYIAEFVRVMKPDGLLIFSTLDTIKPLYRLQPRRRAYALLRTVGVPPAILYHRLKLYPHEVHALPETYVLERMQDSGARILHVQKDSPPSAPHQWQTYYVTK
>NC_009523.1|WP_011958672.1|4986641_4987757_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MNRQVTILAIETSCDETAAAVIRGGRTIISNVVASQIDEHRRYGGIVPEVASRQHILTIDAVLHEALRPLPSGWNDIHAVAATYGPGLAGALMTGLNVAKAIAWIRELPFVGVNHIEAHIYANWLLTDAQPEAPAPQFPVVALVVSGGHTLLALLEGHGRYRLLGQTRDDAAGEAFDKVARLLGLGFPGGPAIQRAAEGAPGGVVLPRAWLRDSYDFSFSGLKTAVLHQIRDYQAREAALQPGTGKSAGKRGVGAPSTPPEATATPHLPPTVVARLARAFQESVVDVLVTKTVEAARAFGAAEILLAGGVAANLRLREELNRRAPVPVRVPPVALCTDNAAMIGAAAFYRFDAGIQHGWDLDVQPNLALDG
>NC_009523.1|WP_011958673.1|4987844_4988558_+|metal-dependent-transcriptional-regulator
MPLSEHTESVQDYLKTIFDIQREQGRVSTTVLAERLRNSPASVTGMLKKLASLNLIDYEPYQGAVLTPAGEKIALEVIRHHRLIERYLAEALGVPWDRVHDEAEKWEHVLSEDLEDRIDAVLGYPTTDPHGAPIPTRDGALPPPHATRLSDLQTGQSATVAEVSDHDPAMLRYFAELGLRPGVDVTVVAVAPFGGPLTVRLEDVEHALGREVAGYIAVCDVTQAEAGEEADRAGRVT
>NC_009523.1|WP_083763330.1|4988554_4989748_-|DUF1887-family-protein
MLRLPGKESQGMASVKIPVALLILIGGRQTPNVLSAQFLRPDIIAPIASREAMRPGEAWEKVRRVLEQLSPRVLDPHTVDAFDLNDIREQCAAAMDRFPDVRWVCNITCATTIMSIGAYEVGRMRNASVWYFDTAGRRVVTLAGQPPDGDPYRLSVENYLQIYNRAAQPTPPPPVSWVALARQMAQAPDDAIEFREILRRANADARFTQPRRLAVLSLTPTMVQWCEQAQAAGFISAIHQHSNHHEILQADGAFWDFVNGAWLEIYAWDAAQRAGCFDDCCPGIEIPAQGGLSPMNQIDLAATHAASLLIAECKTEARPFRTEHLDQLRAITSMIGGSFVGALFITARSQHKADAQALAAFRAQAQARQIVVVTGDQLNQLPDILTREATRPTFPRG
>NC_009523.1|WP_011958675.1|4989760_4990129_-|hypothetical-protein
MSEQQNNKKSEPELKNRLKRLVRSVVTIERPDAKALAHCNRAEKYRRLREHNGQMRTQLLNWIDEHGLSEEVLQVSEPTAFNTLFVVATRHALDELSQAPGVVQVAEDGDITTDLPRPEAAE
>NC_009523.1|WP_011958676.1|4990125_4991415_-|S8-family-serine-peptidase
MVLRRSRHSSVVEKFIAVRKRTRTAAFALHNVATAEKRSEIMRDAQTSRRMMELIRLGLRPHLPGQRKPVGHGFERLGHVSCYIVNAPTDRQAEQAREILADDYLIVPDVPLSLPVARTGAETRFRRPRAPEWPDVSGIQEAHRRGITGEQVIVGILDTGCDADHNEFAGKRIEFRYVPFVPTPESMRAVNGFDTHGHGTHVCGIIAGRNVGVAPGVELLAAAVIESETVKTSLERIVVALDWMLSHFSLAENQHKPMIISMSLGFRPEWISAPAFKTVTDGMRLLLRTLVEDFDVLPIVAIGNDGPGVIRAPGSYAEALGVGAVDFDLNPWPGSSSGQTPDGRHKPDIVGFGVNILSSLERDLQRRSLYARMSGTSMAAPYVAGIAALIASANPGLQGAALRQRLLETALPLSAPAERVGAGLARFVV

Crispr_ID: NC_009523_91

• CRISPR_ID: NC_009523_91
• CRISPR_location: 5018420-5018539
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_91

Consensus_repeat	Method
CAGCGCGGCTCGCACGCGCGACGCTCGCGCACACAGG	CRISPRCasFinder

spacers of NC_009523_91

>91.1|5018457|46|NC_009523|CRISPRCasFinder
TGGTGCAGGAACGCGCACTTCCGCCCCTTGCTTCTGTGATGAGGCG

CRISPR arrays and Neighbor proteins around NC_009523_91

CRISPR arrays

The CRISPR arrays of NC_009523_91

>merge|NC_009523|91|5018420-5018539|CRISPRCasFinder
CAGCGCGGCTCGCACGCGCGACGCTCGCGCACACAGGTGGTGCAGGAACGCGCACTTCCGCCCCTTGCTTCTGTGATGAGGCGCAGCGCGGCTCGCACGCGCGACGCTCGCGCACACAGG

>NC_009523|91|87|5018420-5018539|CRISPRCasFinder
CAGCGCGGCTCGCACGCGCGACGCTCGCGCACACAGG	TGGTGCAGGAACGCGCACTTCCGCCCCTTGCTTCTGTGATGAGGCG
CAGCGCGGCTCGCACGCGCGACGCTCGCGCACACAGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958703.1|5026108_5028403_+|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl|CDD|239168
NC_009523.1|WP_011958702.1|5025373_5025946_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|235811
NC_009523.1|WP_011958699.1|5021110_5023597_-|endonuclease-MutS2	unknown	unknown	gnl|CDD|234750
NC_009523.1|WP_011958693.1|5015092_5015371_+|HU-family-DNA-binding-protein	unknown	unknown	gnl|CDD|259853
NC_009523.1|WP_011958701.1|5024517_5025399_-|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_009523.1|WP_011958694.1|5015549_5017088_+|Eco29kI-family-restriction-endonuclease	unknown	unknown	gnl|CDD|198400
NC_009523.1|WP_157041175.1|5018826_5019897_-|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|213022
NC_009523.1|WP_011958704.1|5028455_5029322_+|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl|CDD|234823
NC_009523.1|WP_011958689.1|5008906_5010097_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226960
NC_009523.1|WP_011958705.1|5029576_5030902_+|SWIM-zinc-finger-family-protein	unknown	unknown	gnl|CDD|309540
NC_009523.1|WP_011958695.1|5017107_5018319_+|C4-dicarboxylate-ABC-transporter	unknown	unknown	gnl|CDD|270400
NC_009523.1|WP_011958692.1|5012043_5014974_+|ATP-binding-protein	unknown	unknown	gnl|CDD|223510
NC_009523.1|WP_011958698.1|5020493_5021105_-|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|366664
NC_009523.1|WP_011958690.1|5010166_5011336_-|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270410
NC_009523.1|WP_011958691.1|5011636_5012047_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958700.1|5023644_5024199_-|CvpA-family-protein	unknown	unknown	gnl|CDD|367140
NC_009523.1|WP_157041174.1|5006503_5006884_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958688.1|5007691_5008903_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NC_009523.1|WP_011958697.1|5019981_5020497_-|YcxB-family-protein	unknown	unknown	gnl|CDD|379553
NC_009523.1|WP_011958687.1|5006913_5007675_-|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224051

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958702.1|5025373_5025946_-|helix-turn-helix-domain-containing-protein	gnl|CDD|235811	PRK06474, PRK06474, hypothetical protein; Provisional.	5.08326e-19
NC_009523.1|WP_011958699.1|5021110_5023597_-|endonuclease-MutS2	gnl|CDD|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NC_009523.1|WP_011958693.1|5015092_5015371_+|HU-family-DNA-binding-protein	gnl|CDD|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	4.84544e-38
NC_009523.1|WP_011958701.1|5024517_5025399_-|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.06524e-07
NC_009523.1|WP_011958694.1|5015549_5017088_+|Eco29kI-family-restriction-endonuclease	gnl|CDD|198400	cd10453, GIY-YIG_RE_Cfr42I, Catalytic GIY-YIG domain of type II restriction enzyme R.Cfr42I and similar proteins. This family corresponds to the catalytic GIY-YIG domain of GGCGCC-specific type II restriction endonucleases R.Cfr42I and similar proteins. R.Cfr42I is encoded on plasmid pET21b(+) in the Citrobacter freundii RFL42 strain. This enzyme recognizes the palindromic 5'-CCGC/GG-3' target and cuts between Cyt4 and Gua5 on each strand of the restriction site to generate 3'-staggered ends. It is an isoschizomer of R.Eco29kI. Unlike R.Eco29kI, R.Cfr42I is functional as a homotetramer, binding and cleaving two cognate DNA molecules in a cooperative manner. Members in this family are single-domain proteins sharing sequence similarities with the catalytic domain of GIY-YIG endonucleases, such as homing endonuclease I-TevI. However, they utilize loop insertions and terminal extensions instead of the separate DNA-binding domain to interact with the target site 5'-CCGC/GG-3'. A divalent metal-ion cofactor is required for their catalysis.	2.88331e-95
NC_009523.1|WP_157041175.1|5018826_5019897_-|polysaccharide-deacetylase-family-protein	gnl|CDD|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	2.73514e-64
NC_009523.1|WP_011958704.1|5028455_5029322_+|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl|CDD|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	5.30691e-91
NC_009523.1|WP_011958689.1|5008906_5010097_-|ABC-transporter-permease-subunit	gnl|CDD|226960	COG4597, BatB, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.28103e-136
NC_009523.1|WP_011958705.1|5029576_5030902_+|SWIM-zinc-finger-family-protein	gnl|CDD|309540	pfam04434, SWIM, SWIM zinc finger. This domain is found in bacterial, archaeal and eukaryotic proteins. It is predicted to be organized into two N-terminal beta-strands and a C-terminal alpha helix, thus possibly adopting a fold similar to that of the C2H2 zinc finger (pfam00096). SWIM is thought to be a versatile domain that can interact with DNA or proteins in different contexts.	0.000143292
NC_009523.1|WP_011958695.1|5017107_5018319_+|C4-dicarboxylate-ABC-transporter	gnl|CDD|270400	cd13682, PBP2_TRAP_alpha-ketoacid, Substrate-binding component of an alpha-keto acid binding Tripartite ATP-independent Periplasmic transporter and related proteins; contains the type 2 periplasmic-binding protein fold. This subgroup includes TRAP transporters that bind to ketoacids such as pyruvate and alpha-ketobutyrate, xylulose, and other unknown ligands. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NC_009523.1|WP_011958692.1|5012043_5014974_+|ATP-binding-protein	gnl|CDD|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	0.00656799
NC_009523.1|WP_011958698.1|5020493_5021105_-|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|366664	pfam01476, LysM, LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.	2.61915e-15
NC_009523.1|WP_011958690.1|5010166_5011336_-|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|270410	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold. BztA is the periplamic-binding protein component of ABC transporter specific for carboxylic amino acids, glutamine and asparagine. The BZtA domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.61107e-130
NC_009523.1|WP_011958703.1|5026108_5028403_+|FdhF/YdeP-family-oxidoreductase	gnl|CDD|239168	cd02767, MopB_ydeP, The MopB_ydeP CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NC_009523.1|WP_011958700.1|5023644_5024199_-|CvpA-family-protein	gnl|CDD|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	2.78557e-06
NC_009523.1|WP_011958688.1|5007691_5008903_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.97515e-63
NC_009523.1|WP_011958697.1|5019981_5020497_-|YcxB-family-protein	gnl|CDD|379553	pfam14317, YcxB, YcxB-like protein. The YcxB-like protein family includes the B. subtilis YcxB protein, which is a functionally uncharacterized transmembrane protein. This family of proteins is found in bacteria, and is approximately 60 amino acids in length.	5.30583e-08
NC_009523.1|WP_011958687.1|5006913_5007675_-|amino-acid-ABC-transporter-ATP-binding-protein	gnl|CDD|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	5.52309e-158

Protein sequences

>NC_009523.1|WP_011958695.1|5017107_5018319_+|C4-dicarboxylate-ABC-transporter
MRRRVFLRSVAAGSAALTAATLAACGQAPQTPVQQATTAPAQQATTAPVQQATQAPVATAPQPQAPAQTSEMPSLEWDMATSWPVALDTIFGGAKTVADRVAALTDGKFKITPRAAGELAPALQVLDVVQQDAVPIGHTASYYYVGKSPVTAFGTTVPFGLNAQQQNAWLYDGGGLEKLQAVYAKLFNVIQFPAGNTGVQMGGWFRKEINTVADLQGLKMRIPGLGGQVLTKLGVTVQVIPGGEIFQALQTGAVDAAEWVGPYDDEKLGLNKAAKFYYYPGWWEPGPTLEVQVNLDRWNELPKVYQEAIKTASAEANITMLARYDARNREALKRLVDGGAQLRPYSKEILAAAEKAAFELYDEFAAKDADFKEIYEEWKAFREAIYEWNKVNEAGYTNYAYNK
>NC_009523.1|WP_011958694.1|5015549_5017088_+|Eco29kI-family-restriction-endonuclease
MIQHSFIFEDQEDVVIFRDPAFEQNKRHAIHRWVPWIAGFSADFVVDALRRYLPDGAGRNTCVLDPFAGVGTTLVESIRHGHNAIGFEINPFAALAARVKCTAFLLDPASVRAHIVAFEQRARRITEAIDQAWACGDDLARLLPAPASRPPAAFRSRVPFFSPAVERKVLHCLDLIHAVPDPQVRDLMLLAFGSILVHVSNYSYEPSLGSRSAVGKADVLNADVAGLLSARLYDMEHDIIVYRRDMMQFQPFPEGKVINDDSRQVRHILPDSSIDIVITSPPYLNPLEKINLAKSIVQELLSQNIHPLPPPIFEGAGVYALYYSGSHDLYASLALSSGKEEKPIYVGKAVPPGARIGGYGLNTPPGAVLFNRLREHALSIEQAQDLDLTDFRCRYLVVDDIWIPLAETLLIEMYQPVWNTIVPGFGNHAPGKGRHKQPATCNLQPATCNLQPVTCNLQPVTCNLQPATCNVQPPTCNLQPSRSLSISCATLAYLNVIKYTSHIPLLMVNRWF
>NC_009523.1|WP_011958693.1|5015092_5015371_+|HU-family-DNA-binding-protein
MQKTDFIKAVAERANRSQKETKEIVDAALEVITEALKRGEKVTLTGFGTFEVRQRQAREGVNPQTRSKIQIPATKTPGFSASSTLKNAVKDS
>NC_009523.1|WP_011958692.1|5012043_5014974_+|ATP-binding-protein
MSRVALRPSPSNPPPATRPPRPDLPFHLVRALALICIVLALVQPLALPQVADSPSFQAILLPRVLHEPGVVAPALLRRAFEPPLFPMISAVAVASLCILAGELSVALIAAILARHAARRATRSTICLRVRPAHTLAGTSASVARPGALMRMIHGGMAKRFWMHPAPPYTLIISGAPDLPAELGALISGTPDDQQRAMGVLDGAVRSSAPGAQIDATDDPLIAAATPGRWIAWQRFGLALPPAYPLHTPALVVEHELAGVLLAAVRPHGSVVHAGLEIALRPQGGMTGWALGRQWRARAMALKLTLEQRQDYALAPDIAAIEAKLGDAAFEATIVATAVAGQRDDAITALRAIGDALGAFQQRTASRLQRLVPLARASVRQITVGQEMQIVSHLRTPPVSHPPTLLLPFRLWRGPDILSAGEVGYLWNLSNPQSNGLMRCDPCRRIAAPPHAFCADDPERIIVGYAAHTDGHSAPVGPTLRDLRQILHLTAGMGAGKSRLLANLCQQLIPHGFMLIDGKGDDRGGSLVDVVRQLIPTVDEGRFILLDPLDTAWPIGLNPLAGADVTQPGGADLALGQILATFARIDPDTWARSPGMQQFARMAALLVLEGETHPTLAHVKQALIDEAYRQELLRSARNIEVASFWLETYPRLGEGQRSSCDALLRRFDALLTAETTRYLVAQARPTLDLAQMIADRMIVLVPLPDVALGGLAGAVGMLIAQAFVRAAFSRSGSDRTRHDYPLIIDELQVLIGNSDTTDIATAITRLRSLGIPTIYAHQALAQLGDLRDLMLINAGNRIMLQTQEPDASIYARAYGASGLTAADLSGQPPNDHQYAVLRCRGVVAGPFSMQPLPWPAVHDESPPPYQGPAWRDVLPDDADPADRFIARVVYDAGTGATAANELAHLSDADWQRLLRRWERIRHVQRQHILAHPGCIADRLERQRWLSRLYAARPRVLAAAEYLRGRQKRSHQHALNST
>NC_009523.1|WP_011958691.1|5011636_5012047_+|hypothetical-protein
MRSASSETSDSLIAALLRALEPASASDPPDDDSTGAPKNVPQTLSVERLAAIATMLATAPSIVAVVPPGVTKGRIAALLPPDERRYAGTVMEALDRAGVLVEPRAEALRWREPRPFCRDDCDWIVAQVRSSRMEDQ
>NC_009523.1|WP_011958690.1|5010166_5011336_-|amino-acid-ABC-transporter-substrate-binding-protein
MKRALGWLLVIPLLLAACGQQAAQTGQPVEVTRIVEVTRVVEVTPAGGAALVQPAATPAPAPAPAAPAGFGETLKAIQARGKLICGVNSQVPGFGFVDPTGAFSGFDIDYCKALAAAIFNDVSKVEYRPLTAEQRFAALQSGEIDVLIRNTTWTLTRDTDNGGNFVATTFYDGQGIMVPKASNITKLEDLNGATICVQKGTTTELNLADQMAARKLQYTPAVFEDANSTFAAYAEERCDAVTTDKSGLVSRRSVLPNPDDHVILDVTLSKEPLGPMVRQGDDQWFDIVQWTVFATFAAEEFGITSRNVDQAKESDTRPEVRRLLGADPNVDLGAKLGLSKDWAANVIKSVGNYAEIYDRNLGPNTKTAIPRGINNLYTQGGLLYAPPFR
>NC_009523.1|WP_011958689.1|5008906_5010097_-|ABC-transporter-permease-subunit
MEHPPRSTSPMRLSRAFWRDERVIQVAAQILFLALVIWVGSIALRNMLTSLQQQGLVLGFDFLNSGAGFDISDAPIPYSSTDTFARALQVGLLNTILVSVLGIVLSTLLGIVVGVARLSSNWLVNRMAWVFVEVMRNVPLLVLLVFIYTAFFLKLPRARQAVSLGPIYLSNRGVAIPWGEPTDTWSLYVSVLIGALIAGAVVGLAMRWWQNRSGRPRPQVVPSLLTMTLIALIGWFALPQPPLALSLPEIAGFNFRGGQVLSPEFMALLIGLVIYTAAFIGEVVRAGIQAVPKGQVEAARALGLNPSRTLRLVVFPQALRVIIPPVTNQYLNLTKNSTLAVAIGYPDLFAISGTIINQTGRAVEMIAVVMAVYLMLSLITSLVMNWYNRRVRLVER
>NC_009523.1|WP_011958688.1|5007691_5008903_-|amino-acid-ABC-transporter-permease
MGANTPTVSKTAEALPPPTERSSIVRWLHKNLFSTWYNALLTVVMLFLAALIVRGVLEWAFTQARWEVITANLRLFMVGQYPVAALWRIWACVALLALLIGMSWSIWGGAQRGGAIAFGALPFILAIITSDETARLALLITGIAGVVGYALSWRWSAALRRISIVGWILYFPILFVLVSGVGADDSPIPPVPTNLWGGLLLTLLLSVVGIVFSFPLGVLLALGRQSSLPVVRWLCVAYIELIRGVPFISVLFMAQLMLPLFLPGITIDRVVRAMAGVVIFSAAYLAENVRGGLQSIPRGQYEAARALGLNPWKMTLLIILPQALRAVIPILVGQFIALFKDTSLVVIVGLLDLMGIARTVLAQPDFLGLQAEVYTFVAFIYGIFCYLMSAFSQRLEAKLHTGR
>NC_009523.1|WP_011958687.1|5006913_5007675_-|amino-acid-ABC-transporter-ATP-binding-protein
MGTNVPSTADPIIICRDVHKWYGNYHALRGITMEVRRGEVVVVFGPSGSGKSTFIRTINRLEDHQRGQIIVDGIELTHDVRNIERIRMETGMVFQQFNLFPHLTVIDNITLAPIWVRGWTKAQAEEVAMQLLKRVGIPEQARKYPGQLSGGQQQRVAIARALAMQPKIMLFDEPTSALDPEMIKEVLDVMVELAESGMTMIVVTHEMGFARAVADTMYFFDQGQIVESGTPEQIFGDPREARTKLFLSQVLSH
>NC_009523.1|WP_157041174.1|5006503_5006884_+|hypothetical-protein
MEHRPKMPDFERMARDAGYRVVEIERLRSNRWLVTLVDGDGHPVLVLAQARPLIGSADVQDLAEFVRLRNPTMGILLAIGGMFSASAQHTCAELRDRRLHLCTALPPAPAAVAEEPAVRNALASPR
>NC_009523.1|WP_157041175.1|5018826_5019897_-|polysaccharide-deacetylase-family-protein
MEKNSTSLPLILLTLLTGIALGWLLNDLMRQPPAPLAVAPTQAPTATARATSVLTAPVPSSTIAPQSPVPSPPPAATPLLATAIPPIPTASPQPQVIGYVGHRAAAGETLEQIAARYRTSPALIKAYNMINAPLRTGRELVVPLIEPGDAGEALLVQRGNPMRPWVALTLDAGAGAAPTPRILDALRVRGITITFFLTGRWIRDNPGLVRRMVADGHELANHTMNHPDLTTLDDEAIRRELSETEAILHDIAPDAVIRPFFRPPYGAYNERVLRVALSEGYLPVYWSLDSLDSVGEPKTPEFLIARVTQKLSPDDLRGAIILAHCGSDATADALPDILDRFAAMGFEVRKLSDVMQ
>NC_009523.1|WP_011958697.1|5019981_5020497_-|YcxB-family-protein
MTATTASSFTLNYTHTLDEQLHACRLYQRSTRKHLIYRSIGFLAIFGGVWIAITSGVNPQALLLLALGLFTWFDPVPLLIVWSTFRSSPPLRQTVEAMFDQRGAHFRFGTERVSRPWDRYLSFVESDRVFVLIHGRWAYSVVPKRAFASPQAIDAFRELLRAKIRPSTQNR
>NC_009523.1|WP_011958698.1|5020493_5021105_-|LysM-peptidoglycan-binding-domain-containing-protein
MPQWMLFALIVVALILPFIGAIALRLTRQRLEERERLALAIIVFGAAFGAVFVLARSDISSLRIAGLTVMQPIAPPVAPASQPPAIAPTVNVPPVTPTATLEPTVTLESTVTPEPTATLEPTATLEPTVTPEPTVTPEPTVTPEPTATLAPQSGSRRYVVQPGDTLRAIAERNGVTVEALLRANNLTPAAADNLRVGQELIIP
>NC_009523.1|WP_011958699.1|5021110_5023597_-|endonuclease-MutS2
MAIALQTLETLEFPKVRLQLARYTAFSASRELALNLTPSVDPFEVRRRLRLTDEARRLLDAMPDVSIGGARDVRPAVGLARRGGVCDPEALIEIAATLASARRLRATLRKLDAASFPLLHETAVDLPLLPEVEDAVARAIGEDGQVLDSASPKLARLRSEVRTAFNRLQEKLHNLIMTHGDVLQEPIITVRNGRYVVPVKATHRRAIRGLVHDQSASGATLYIEPLTIVELNNAWRELQLAEQAEVERILAELSALVGDHAGAITAGVEALATLDLAFAMAQYAAAMRCVMPEIVDPPLPPDEPLLLLTAARHPLLDPQKVVPIDMRLGGRFRLLLITGPNTGGKTVALKTTGLLALMAQAGMHIPASQPSRLPVFAQIFADIGDEQSIEQSLSTFSSHMTNIIRILRALEDAPDVAPAETSVSGSTQTMPPDTQRLGRMPALVLLDELGAGTDPVEGAALARAIIERLLELGVLGVATTHYAELKAFAYATPGVENASVEFDVETLAPTYKLTIGLPGRSNALAIAARLGLAPDLVERARATMAREDVQVEDLLAGIHRERDAAAAELQRAMEVRADAEKYRDRLAAELRAFEEQRDEAWQAAREAIEAELRQVRNEVRRLRDESRSVAASRRWLEEAERRLQEARASLPAVPPGKPAGHPAPAAEQVARLQPGDVVRVRSVGLTGEILSINEEDQTAEVQVGGFRMQADLAELTREKRAAGNGGGQPARPAYESRGTSLPAPRDVSLELDMRGWRAADVGERLDRYLNDAYLAGLPWVRIIHGKGTGALRQAVRDTLKDHKLVASFSSASATEGGEGVTIVRLQER
>NC_009523.1|WP_011958700.1|5023644_5024199_-|CvpA-family-protein
MNLIDILFLLGVLGGLALGFFQGTIRLAIAIISFYISIILASLYFQSLGRFFRERFGTTFDVAQIVAFGIILLVAFLLITTAGLYTFRYAKMPASLDFVDKIVGTLLGLVLGALFLGMLAILLEQLFVFRDTAGTVTFPIVKAFQSGVRGSTLVSFFANNILPLIYATVKPVLPRETEIIFLIR
>NC_009523.1|WP_011958701.1|5024517_5025399_-|CPBP-family-intramembrane-metalloprotease
MEMSNPFLELAATGKNAWWRYVLGVLLVLMMWMIGTAIILIPVTLQIVSEASPFGLALALLTFAPMLLGPMLVTRWLHGRPVATLVGPERRLNWRRIGVGALLWLVLAGLATLVDALLRPGQYMLNPAFFQNLSLLLVGLFLIPLQTSAEEVFFRGYLLQATGRLTRNVWMLSVINGVVFTLPHLANPEAESNAVLAGLNWFVFGFFATLITLRSGSLDYALGIHAVNNLFGLIIAGYEGGALPALALFVASELDAAYALLSLLVAALAASLFLNRLEAPGVPTASRQEQRYG
>NC_009523.1|WP_011958702.1|5025373_5025946_-|helix-turn-helix-domain-containing-protein
MYEQKFDAINHPVRMRIFQLLYGNQLSIHQIADLLTDVPRPSLYRHVRKLQESGLIRVAATRRINGIEERFYTSVEGLIDPAELEKPGGIEKFAAHVSTYGAVVAQALAQYVIRRGVPDLTNIAARDYIFYATEEEFTRLRKAIYALLQEMEQQPPAPGRTQRRMFVIAHPMLTTTMNQESEHGDVEPVS
>NC_009523.1|WP_011958703.1|5026108_5028403_+|FdhF/YdeP-family-oxidoreductase
MKLRGFNSATWVSLVPNGLGHVKPNHYWEIVRTIWENRDNLGTAWRILRDGVCDGCALGTTGLRDFTMDGIHLCTVRLNLLRLNTMPPLDLRHLDDVSRLRSLNSRQLRALGRLPYPMLRRRGDAGFRRISWNEALDLIAARIRATDPRRIAFYLTSRGITNETYYVAQKAARFLGTNNVDNAARLCHAPSTTAMKQTLGVAASTCSYRDWIGTDALVFIGSDTPNNQPVTTKYLYYAKQKGTRIFVINPYREPGLERYWVPSVFESALFGTRLADRFFQIHTGGDIAFLNGTLKHLIENDWIDRAFVAAHTNGFPETKAHLETQSWDMLEHASGASREEMRTFAEILAQAKSAVFVWSMGITQHEYGVENVKTILNLALARGFIGREFCGVMPIRGHSGVQGGGEMGCTATTFPGGRPITVEHARWLSEQWGFDVPAWKGLTCGDMLDAAYAGEIDVFYAAGGNFLDTLPDPEYIRTALERPALRVHQDIILSSQMLVDPADTVLLLPAATRYEQRDGGTETSTEREVIFSPEIVPPPAEALSEWEIFMRVAERAAPDRAPLIHYVSGQQIREEIARIVPEYDGIQRLHRTGDHMQWGGRILCRNGIFATPDGRAVMTPLTPPDPTLPDGAFVLRTRRGKQFNSLIHSERDPLNGARRDDLLINPDDAAALGVREGDPVLIRSEAGEMRARVKYAPMKPRNVQVHWPEGNVLIAPRRRDPGSGVPAYKAVVTLHPIRIANQTTPIVAGPQGASAGDAESHREQ
>NC_009523.1|WP_011958704.1|5028455_5029322_+|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MLTQPNVQRRTIVKVRDKRWRREKDALVVEEPLEIRLTVSVADGRQTIPLTTIMRTPGEDFELAAGFLFGEGIVRERREIATIRYCNDATISDEARFNTITVDLHPDAHPDLTGAQRMFYVSSSCGVCGKASLETLLARGCAPLSDDTLRVGLPALTGIDAALRQAQALFHKTGGLHAAALFDADGALLALREDIGRHNAVDKLIGAHLLEGRLSALTQAILLVSGRAGFEIMQKALTARIPVVAAVGAPSTLAVTLAQRFNMTLIGFLRGASLNVYAGEQRIEWVGE
>NC_009523.1|WP_011958705.1|5029576_5030902_+|SWIM-zinc-finger-family-protein
MSSITAEEAKALAPDLASLKAAQELADICHWVSLGANEAALWGECKGSAQKPYKVQVDLSNRGFACTCPSRKSPCKHVLGLMLLASASPTILKDATPPAWVSEWLEKRTDQTSDHAGQAEPDTASSQSRQKDAARRAARREKLVAAGLETLDLWLKDLIRQGLAFAQSAPASFWEQQSARLVDAQLPGAARMVREMRDIPGASPNWTEILLLKMARLHLLIQAYRRLESLPEPSRTDVRTLLGWTINRKELILSSPALSDDWLVVAQTLEEDETSGLRTQINWLWGKTSRKPAQLILFAFRTRPFEDHLFPGLTLRGDLVYFPSAYPLRAVFKSYRRLESTFVPAGLPNFLAFLDAYSTALGLNPWLEHFPVVLEHVTIERLETNWLLCDGENQAIPVSSRSHCWELLSLSGGHPLTVFGLWDGFSFFPMTAWENERFVRL

Crispr_ID: NC_009523_92

• CRISPR_ID: NC_009523_92
• CRISPR_location: 5096014-5096105
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_92

Consensus_repeat	Method
GGATTATTTCTTCAAAGACCATAA	CRISPRCasFinder

spacers of NC_009523_92

>92.1|5096038|44|NC_009523|CRISPRCasFinder
GCCCTCGGCTATCCAGGGCGAAGCCCGCCTGCGCGGGCTAGAGC

CRISPR arrays and Neighbor proteins around NC_009523_92

CRISPR arrays

The CRISPR arrays of NC_009523_92

>merge|NC_009523|92|5096014-5096105|CRISPRCasFinder
GGATTATTTCTTCAAAGACCATAAGCCCTCGGCTATCCAGGGCGAAGCCCGCCTGCGCGGGCTAGAGCGGGTTATTTCTTCAAAGACCATAA

>NC_009523|92|88|5096014-5096105|CRISPRCasFinder
GGATTATTTCTTCAAAGACCATAA	GCCCTCGGCTATCCAGGGCGAAGCCCGCCTGCGCGGGCTAGAGC
GGGTTATTTCTTCAAAGACCATAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase	unknown	unknown	gnl|CDD|366291
NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl|CDD|234729
NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein	unknown	unknown	gnl|CDD|376704
NC_009523.1|WP_041334242.1|5087133_5087325_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041400.1|5084762_5086895_+|YfhO-family-protein	unknown	unknown	gnl|CDD|370572
NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein	unknown	unknown	gnl|CDD|274529
NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187570
NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein	unknown	unknown	gnl|CDD|378280
NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase	unknown	unknown	gnl|CDD|133055
NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein	unknown	unknown	gnl|CDD|119401
NC_009523.1|WP_011958752.1|5099098_5099557_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_049767554.1|5095065_5095680_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein	unknown	unknown	gnl|CDD|197891
NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|366166
NC_009523.1|WP_011958744.1|5087361_5087724_+|DUF2089-domain-containing-protein	unknown	unknown	gnl|CDD|378280
NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NC_009523.1|WP_011958742.1|5083222_5084446_+|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl|CDD|376687

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase	gnl|CDD|366291	pfam00762, Ferrochelatase, Ferrochelatase.	1.16652e-72
NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl|CDD|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein	gnl|CDD|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	4.73133e-94
NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NC_009523.1|WP_157041400.1|5084762_5086895_+|YfhO-family-protein	gnl|CDD|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	7.92987e-09
NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.82192e-49
NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187570	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs. GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.8945e-64
NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein	gnl|CDD|378280	pfam09862, DUF2089, Protein of unknown function (DUF2089). This domain, found in various hypothetical prokaryotic proteins, has no known function. This domain is a zinc-ribbon.	0.0080333
NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.61808e-50
NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	0.000102874
NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase	gnl|CDD|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.02336e-40
NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein	gnl|CDD|119401	cd06662, SURF1, SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring complex of the respiratory chain, is an assemblage of nuclear and mitochondrially-encoded subunits. Its assembly is mediated by nuclear encoded assembly factors, one of which is Surf1/Shy1. Mutations in human Surf1 are a major cause of Leigh syndrome, a severe neurodegenerative disorder.	1.57314e-60
NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein	gnl|CDD|197891	smart00818, Amelogenin, Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth. They seem to regulate formation of crystallites during the secretory stage of tooth enamel development and are thought to play a major role in the structural organisation and mineralisation of developing enamel. The extracellular matrix of the developing enamel comprises two major classes of protein: the hydrophobic amelogenins and the acidic enamelins. Circular dichroism studies of porcine amelogenin have shown that the protein consists of 3 discrete folding units: the N-terminal region appears to contain beta-strand structures, while the C-terminal region displays characteristics of a random coil conformation. Subsequent studies on the bovine protein have indicated the amelogenin structure to contain a repetitive beta-turn segment and a "beta-spiral" between Gln112 and Leu138, which sequester a (Pro, Leu, Gln) rich region. The beta-spiral offers a probable site for interactions with Ca2+ ions. Muatations in the human amelogenin gene (AMGX) cause X-linked hypoplastic amelogenesis imperfecta, a disease characterised by defective enamel. A 9bp deletion in exon 2 of AMGX results in the loss of codons for Ile5, Leu6, Phe7 and Ala8, and replacement by a new threonine codon, disrupting the 16-residue (Met1-Ala16) amelogenin signal peptide.	6.14634e-10
NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase	gnl|CDD|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	9.47854e-27
NC_009523.1|WP_011958744.1|5087361_5087724_+|DUF2089-domain-containing-protein	gnl|CDD|378280	pfam09862, DUF2089, Protein of unknown function (DUF2089). This domain, found in various hypothetical prokaryotic proteins, has no known function. This domain is a zinc-ribbon.	2.46958e-53
NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.20323e-31
NC_009523.1|WP_011958742.1|5083222_5084446_+|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl|CDD|376687	pfam01960, ArgJ, ArgJ family. Members of the ArgJ family catalyze the first EC:2.3.1.1 and fifth steps EC:2.3.1.35 in arginine biosynthesis.	0

Protein sequences

>NC_009523.1|WP_049767554.1|5095065_5095680_-|hypothetical-protein
MTREEVLANVLDPVRWATPEVLMEIIKTPSLRGIVYGYVAEYEFMRYLREDLRIKDYHRDDDHKKTKSDLNFTYHGRRYSVQIKCLQTNSIKLVNGIFHAVVQNDASDRRKVKLPNGEEIETTCYVAGEYDILVSTVQPFTGSWKFVFKKNKDLSKSKYHRYTEEQRKYLLATQEPITYPVEVSGWTYDLLSLLSDSDLGQSKT
>NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase
MSDTRIKKKRVVRNGVATSNVIQSAHVGGNEDVFPLILQLHVPRGSIVADVTWGKGVFWKNVPKDDYDVRATDIKMGVDCRNLPYRDGEIDCVVLDPPYMESLLRKNVDHFGGSGTYAAFRDSYSNGKVVGDSEAKWHDAVLDLYYKAADEAYRVLRKRGILIVKCQDEVSAGKQRLTHVEIINEYERKGFVVKDLFVVVRKNSASVSRIVRQLHARKNHSYFLVFIKR
>NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase
MNHEDILQTGVLVLEYGEPATLDDIVPYLTAHYHGHPPSPEDIAYMRERCQRVWSGTSGDSAARRLAAALDDELRQRYGSRFQVVLGARHWHPTVADALAHLVQTGIQYVLVLPLSPVASQMSLRSYQETLEHAQTEVAQPVRLHLIPDWPDLPGYRSALTINATLALERLPDCDRSRTALLAIAHSVAESARKPETEYQWRLRQTMQRLVSTLGCGAGYLAYYGAGGPGQWLGPDVLSALDEIARAGLRHVLAVPINTVYDNVEVCYELDVRMAERAAALGLGYVRAAIPNAVPALIADLATLVAQTAAVFQN
>NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGPREAGEVLLHGLGRLEYRGYDSAGIAVDDGRQLQLRRSVGKLANLAAQLREQPVAGRCGIGHTRWATHGGVTEENAHPHRDASGEIVVIQNGIVENYLELKERLIAHGHQFASQTDTEVIARLLGEYYDETGSLEQAMRRTLGELRGGNAVVAMTRREPGRIIAARLGHAGGIVIGVGDDEMFVASDVPAILDYTRRVIFLDDREIAVIDAGGATISRLDGTPVARPPVTIPWDPVSAAKGDYKHFMQKEIFEQPRALTDVLRGRIDLDHGAVLLDELAFDEQELRQLERIYAVGCGTAWHAALVAKFAIETLARLRVEVDYGSEFRYRDPLIGERAAVLAITQSGETVDTLAAMEEARRQRAKSIAIVNAVGSQAARLADGGAIYLHAGPEIGVASTKAFTTMLVASYLLALRLGAARSVIATDEVRRYIQALIELPGKVERILERQEIYEELAERYHNARDALYLGRQVNYPVALEGALKLKEISYIHAEGYPAGEMKHGPIALIDRDLPVVCIAMRDSVYEKMISNVEQVRARGGHVIAIAAEGDALIASKADYVIEVPQTLPLLTPVLTSVPMQLLAYHVAVRRGCDVDQPRNLAKSVTVE
>NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein
MPVQQVSVGETPHVRFGRCAGSLRVEPGETGIVEVWTEADEGVVLERDDQGVVIQGMITGDCRLRAPSAATVSGEVVEDGVFVAGMISFSLNSAGDDVRIEGVSGTVTIGHVEGDLVVTRAATLRVGNVEGSAQITAVEGAVVVRRVEDDLTINDAGSVEVQYVDGDLHLSGVRDDALFERIDGDATIERVERLRVTDTIDGDVRINRSGVIVLNDVAGDVGVDEVQSLTVGAISGTLHADGVAEVVRFRDLDGDLRLRRSERAAVEGGSVSGDVRIEQTRAVMLGSVGDNADMRAISGNVSIGSVGGDATCIDIGGVLNAGSIGGDLTLRSVSSATHIGNIGGDLTLAMRFAPDSTMKLNVGGDARVELLPDASLTLRATVGGTVRGPGVAASGGMFSAVYGEGAALLELLVGGDLSLRGPAPRRMSAMGEGASQSASAGQPPDDDIGRWAERFAEEMGRWGEQFGRDMSRWAEEFSREMGGRGDEWARRSQRKAERLRQRIERDMREAAERARERAQREGHPREVHVRINDREWRFDEERLERMKREAAAAAQAGIIGAIEAVERALESLGIPRSRPPHPPHPPHPPGPPHPSQPPHPPHPPHPPGPPHPSQPPHPPHPPGPPHPPEAATGATIRINVTQAPDASAPADEPAQAKAPEQAASPSGATLEEQRAAILRMVADGRITPEEADLLLEALGTDQERPFRNDDRTGM
>NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein
MAMTDDRLRILRMVEKGQISAEEGARLLDAITDDAARIRAEARSRSLRIVVTDLNSRRQKINVTIPASLVSVGLKLGARLFPRNAGVTNDDVLRAIARDTPGRIFELQDLEEGERIEIFVE
>NC_009523.1|WP_011958744.1|5087361_5087724_+|DUF2089-domain-containing-protein
MNPLLTTCPVCGEALHVIRLECDACHTAIEGRFTLGRLGRLSREQLEFVELLLKNRGNINGVAGDLKVAYNTARSRLDEIVAALGYGPPAADARPDRRAILDRLAAKEISVEEALRLLKS
>NC_009523.1|WP_041334242.1|5087133_5087325_+|hypothetical-protein
MLHSLDCLIMMAQERYQTLLTEVATERLIRRARDAINTATGIPGGSGSGTLLTSRTNAHLRTA
>NC_009523.1|WP_157041400.1|5084762_5086895_+|YfhO-family-protein
MPLDKAFGIYAWVQLIIAGLGSYSFARRIGLDMGPALLAGVCYMFTGHMLTYLPFPELSGATAMLPWCFWGVERALSSGAWRSWAVAAAMLGLVVLAQIQLAFYTYVATGCYALFRIMQHDEGRTAARWRMLTGLALAYALGLGLSAVQLLPAMALSAQGQRSDIGFSLAPPEEYFGSMLRLVFPALGGFERIGPPPAWGPPTFQVPYPYVGVTPLALAIIGLAIARHRLAAFFGIVAVASFALAVRTPLLQVFIALIPPYRQFEDHTRWYMVWGFAIAILAAIAAQRLYAPANVSAWENTPSRADWRARLPAARLLILIVGVFIVGWSLHHLALFTPQSRFGHYFTMIRTQQLLPLLVFGGIGLISLALLRFYRRNAAIAFAPVIAVAALDMWWYGAGFNTSVSPSIARPTTDLTRELATYSSDLQLFQVLYPPTRQIAFLQSQPRPFRIHGGDYDALPPNIASAYGLEDVRGYHSLYPARYNRLARLIDGKDYRRTSEGNVSLRAFLTSAYTRPRLLDMLNVRYLVFPPGSTTAARYPGLELVHESDEGRIYRNPNALPRAWFVYRVAIIPDDDAQLDYMARPDFDPATVVVVPTPVPTTGPPPAVPDPTPIVTYTPDTVTVIAAPSAPAILVLADAWYEGWDVMVNGEPAPILRVNYALRGVWLPPGSHTIEFVYRPRPFLIGGLISMATLLILMIIGGIGRQRERR
>NC_009523.1|WP_011958742.1|5083222_5084446_+|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MQTDTFSLARGFTATATACGLKPNGALDMALITADVPCSAAGLFTTNRVKAAPVIYDQEILATNASAIRAVIVNAGNANACTGPQGAASCRAMAELTAERLGCRADQVLVLSTGVIGRQLDMTKVAQGIASLTGPTAHSGAGAAARAMMTTDTHPKVASRTITVAERTVTIAGMCKGAGMIHPNMATMLAIVTTDAHAHPAQLDRALRIAANRSFNRVSVDGDTSTNDTLLLLASGASGVPVSDTPLTDGLAFDDFTATLTDVCIDLAKQIARDGEGATRLVEITVSGAQDEQQAHQVANAIARSPLVKTAIHGGDPNWGRILCAAGYSGAAIDPDRLALWFGPPEASIQLVAHGLPLDADLAAASALLRQDPVFITLDLGLGDARTTVWTCDFSKEYVEINAHYTT
>NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MATTTARRWPGRRALVTAVGLVLIVAACAAGVFFLRGGQQTPVRSYGLVNPRFDRLIATVNATGQIAPVQTVNLSFAVTGRVAEVLVRPGDPVEKGQPLARLDTRELELRLAQAEAQLAQAQANLDRLLAGPLSAEIAAAEAQLAQAAGQLRQVEGSVTVADMRAAEEQLRQAEARLNQLLNGPRESDVQTAEARIREAELNLERQRTQLSTAKTNAQIQLEQAVNQLTQAQSRYSTAKQNWEYVRETGADPIVRTVADPNRPGQTRPNILNDSQRQQYYDAFVQAEATLRSAENAVAQAQVNYDNARLAEANGVELAEGQLAVARANRDLLFATPEPDVLAAARAQVASARAALDRMRGDQRGGQLEAARAAFEAAKANLERLRADPRPADLAAARAQVDAARAARDLARLTLDEAVLKAPFNGVVAEVNLKVGEAPSPGRPAIVLANLERFYVDVTVDEIDIIRVSVGQPVTLTLDALPEVTLAATVETIGPLALPQAAVTSYQVRIGIPNTDPRVRAGMSVGADIVVAERDNVLLVPRRAVRSDRGRLLVDVVRDPGLCALPPEQRPARPDLEAREVTVGLSNDQVIEIVSGLDPQACVYVEGVDQRFTFFTGPPRTR
>NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein
MTSYESNRLDLPDPVVTARGRGVTGMEYQIIGTTMQAVILELDPGETVYSESGAMSWMSGNIQMATNTRGGGLGGMFKRAISGESLFLNEFTSVGGKGIVAFASDFPGKIVPVALAEGQMMIVQKQAFLCAEKTVGLDIHFRKRLGAGFFGGEGFIMQKLTGPGIAFVCLDGEIVEYTLDAGQVLKVDTGHVAMYEPTVEFDIEMVKGFKNILLGGEGLFLTTLRGPGRVWLQTMPTANLAKAIAPYIVTSSS
>NC_009523.1|WP_011958752.1|5099098_5099557_-|hypothetical-protein
MLVLSILGVIACILFIIAIILLIVFLILKFAAHLDERFYYNFFRTSLVMLAAVLLVFGGSYWYDEATKSGGDMLNGLILMMTGGIIFVGLIAYTIWKTNLFYAILITLVQIGVAALLAFFGMIALIIAAGLLFLYILFELGSTQTVHVVNED
>NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein
MRLERFTEKAQEAFQDAQEIMHDQHHTQLDVEHIFLAMLRQRDGLTARAIARLGVDADMVARRVEHELEKSPKVYGQYGYGNQVYITPRTQRLVKRAEEEANRLNDQYVGIEHLLIAISGEREGASSRILNSFGIDQERIYQALMDIRGHQRADNPSAEARYEALSKYSIDLTDLAAQGKLDPVIGRDAEITRVIRILCRRTKNNPVLVGETGVGKTAIAEGLAQRIASGDVPLPLKNRRLLALDLAGMVAGSKFRGEFEERLKAVMDEVRSSEGQIILFIDELHTVVGAGAAVGSIDASNMLKPALSRGEVQVIGATTIDEYRKHVEKDAALERRFSPVFVEEPDVETTVEMLRGLRKRYEEHHQLTISDEALQAAARLSSRYITDRFLPDKAIDLIDEASAKLRIDIYSMPKALREQEAELNRLRREEEEAGARREYERAAMLRARYLQLETEFEHARSEWLKSSNLDEVVDEEDVAAIVSTWTGIPVNRMLETEREKLIDMEARLHERVIGQHEAIVALSDAIRRARSGLKDPRRPIGSFIFVGPTGVGKTELAKALAEFLFDSEDAMTRVDMSEFQERHTVSRLIGAPPGYVGYEEAGQLTESIRRRPYQVVLFDEIEKAHPDVFNTLLQLLDDGRLTDAQGHTVDFRNTVIIMTSNVGTEHVRQQSLGLVRTHDRNAEEAARERVFEALRQAFRPEFLNRIDEIIVFHALTEQELMQIVDLLVREVDERLREQGLTLELTPTAKKLLVREGYNPAYGARPLRRTVQRLVETPLSRNLLRGLFKPGDTILVDVDPQTDALTFTRRETLDLEVKKPVEPVSG
>NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein
MVRYIFTGKRLIATFLVLIGAVALCGLGMWQLDRHSQRAALNARIAAGLAQPPVALETVDDLQSLDYRPVTARGAFDPTHEVLLRNRSFNGVTGYHVITPLRLSGRNEAVLVDRGWIPLTEASPEARRKFAPPAGEMVVTGIARQPETYVGGPQDPPLSPERPRLDAWFRVDVARIQEQTPYPLLPLFIEVQPIPGAEPTLPQPVPLPELDQGPHLGYAIQWFAFAGILVVGYVVLQRNTLRGEG
>NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase
MEHFTSHDLHLSDVRLHLYRGGHGPAVVLVHGLTDHARYWAPLARALAGEYDVIAYDARGHGLSDPSPNGYHLDLLAADLAALVEALGLMRPAVIGHSMGASTAAIAAATHPGMFRCVILEDPPWRSALPADMPDVTTTRATWREDLLAMKTMDDAALLARCRAESPGWSDEDYALWMESKKAVNPDALDVLPSFVRLWPEDVRRIDCPLLILTGEPERGALFDPGAEQIVRQVRPDVQVVRIPGAGHQVRREGFVAYLNAVKRFLKDAA
>NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase
MSHPQTQPENATVNAADTLRVSVVIPCYRQAQFLPEAVASVVAQTFTDWEIIIVDDGSPDDTAAVAQRLIAAHPDRRIRLIRQENRGLAEARNAGIRVARAPYILPLDADDMLEPEMLAQTVAALDAHPEVGFVYTDVRRFGAENNILRTRPYSLDHLRFENLMMPATLFRREAWEQVGGFRTFKPVQGYEDRDFWVSLAEAGWEGLHIAQPLLRYRRTAGSMLSTARRYDLELRARIFLDHWRLYEPDALAWARRVTSPAWSVDGKLRSPWHWLLAYLGYLALIRRYYPSLLLSSLVHPLFWRLPISWQGRLRALARLARLQR
>NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase
MRFPPHPLDPARPVYGYAPADPSAQPVVSIVTPCYNAGAMFLDTIASVLRQSLQQWEWIIVNDGSDDAATLRVLGALRASPDPRIRVVDQPNYGPAAARNAGVAVSRAPLLFFLDSDDLLAPTALEQLAWALTAHPEVAAVTTWYVLFGAMQGLLRRGFASRHTFPHDNPLTVSVMLRRTAFERIGGFDESLRHGLEDYEFWVRLADAGMWGCNIHEALVWIRRKSADMYRGYRWNFQTDRAALARMRRALRARYPRVFRDGPPRPPGEPSPILQPHPLIMPDPPFENRLAPRGERRVLLLLPWVEVGGADRFSIDLADGLRARNCRVTACLLRPSANPWKHELIMAAHEVFDLPLFLAFADYPRFLRYLVESRGITTVVVHNDLFAYRLLPFLRAWCPQVTVIDFLHIVQDHYHGGVPRAALEYRSLIDLHVAASHQVREWMVAHGADPERVDVCSINVDTQRWKPDPALRDRVRAELGLRVDEPVVLFVGRLVPQKRPRLVVEIARALVERGVHCTFLVIGDGPDRGWMQRFVRRHRLEGRVRLLGSVSSTRVREMMAAGDLLVLPSESEGIAFVLFEAMAMALVPVAADVGGQRELVTPECGVLIPPGGDQVAQYVTALERLIADPSQRAAMAMAARTRVVERFDRRQMIDCMLARIERAETLARTAPRPLVDRDLGLASASLAIEYLQFREALLRLAPVRRARAVRWSSAWLRLARLMRMRAWVDRFDRRIYVLRREVMWRIKRALGRAYNR
>NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase
MNADYQSRYSYAPADPSADPDVLVVTLVVSVTDLARQEMALRAQSLQSWQWVIVCLPALAEGLLHLATDPRVRVIPEMHPASASRHLVQSSSCRFVCTLSADTALDPTFLEKAAWFLATNPHVACCNAYTRDESGALWSYGFEQGDRFLDTNYAGATALFFKEDLLATGLPLPINNDDAWEIWLQLADQGKWGFTIPQPLILSLYPLSMPPFQSRDPSHHTIQRDRLRARYGTLHGRFPHVGLTDATPFEAISDAPVLANHLAKSTTTKRILMIVPWLIVGGAERVNLNLISYLTQKGFEVSIVTTLIRQQHPWLSEFERFTPDIFILDLFLRLPEFPRFIVYLIRSRGIDTVIVANSYLGYQLLPFLRSHFPETVFVDLLHSYEEMWKNGGYPRASVGYQSQLDLTIVTGGHVKRWMVARGADPERIHICYTNVDVDRWRPDPQRRAEMRISLGLEEDDLLIVLIGRLTSEKRPLLFAPIIAALRKKTASRFLTLVLGDGPLRGQVERQIRELRLSDVMRALGRVNDDEVFGYLAAADVFLIPSQTEGVSVATMEAMAMGVVPVSADVGGQGELITADCGVLIPHGPHEVDEYARVLARFADDPDMRRRMGQAARKRVERHFALRDFGPRMEALLEQAWELHHTAPRVVIPIELAREWAAQIIEYTRQEMSLDEIWAERESWRSNPRPHPSLAIPLRQSFRRRVLRFVWAQVAHLYRWGVSRNMRWLVPLKERLVSEVYRRGW
>NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein
MRLLITGIGGFVGRHMAVYAVTRGATVVGINRTMRPVPGAELFVADLDSASATADAVKAAAAEAVIHLAAHTPANCPQLPLQEWLTGTPVATLNLLEAVRIHCPRAKVLIVSSSAVYGQVPLDRLPVTEDHPVQPATMYGVSKAIQELLAIRYVSEYGLQVIRARPFNLVGPGEPRGMLTSTLAAQITAIAAGKQPPVVRMRHRATSRDFTDVRDAVAAYWALLERGEPGGVYNVCSGTATPVGDIVERLLRLAGIDAAVEETGAHTSGDILIQAGSAARLTAATGWRPRFDLDASLRDLLATFAS

Crispr_ID: NC_009523_94

• CRISPR_ID: NC_009523_94
• CRISPR_location: 5103361-5103454
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_94

Consensus_repeat	Method
GTATAGCCCGCGCAGGCGGGCTTCGC	CRISPRCasFinder

spacers of NC_009523_94

>94.1|5103387|42|NC_009523|CRISPRCasFinder
TCTGGAGAGCCGAGGGCTTATGGTCTTTGAATAAATAATCCG

CRISPR arrays and Neighbor proteins around NC_009523_94

CRISPR arrays

The CRISPR arrays of NC_009523_94

>merge|NC_009523|94|5103361-5103454|CRISPRCasFinder
GTATAGCCCGCGCAGGCGGGCTTCGCTCTGGAGAGCCGAGGGCTTATGGTCTTTGAATAAATAATCCGGTATAGCCCGCGCAGGCGGGCTTCGC

>NC_009523|94|90|5103361-5103454|CRISPRCasFinder
GTATAGCCCGCGCAGGCGGGCTTCGC	TCTGGAGAGCCGAGGGCTTATGGTCTTTGAATAAATAATCCG
GTATAGCCCGCGCAGGCGGGCTTCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase	unknown	unknown	gnl|CDD|366291
NC_009523.1|WP_011958752.1|5099098_5099557_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958760.1|5112379_5113096_-|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|133048
NC_009523.1|WP_011958762.1|5114136_5115180_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103
NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein	unknown	unknown	gnl|CDD|274529
NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl|CDD|234729
NC_009523.1|WP_011958761.1|5113098_5114085_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|275033
NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187570
NC_009523.1|WP_011958763.1|5115190_5116015_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|372616
NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein	unknown	unknown	gnl|CDD|378280
NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase	unknown	unknown	gnl|CDD|133055
NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein	unknown	unknown	gnl|CDD|197891
NC_009523.1|WP_049767554.1|5095065_5095680_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|366166
NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein	unknown	unknown	gnl|CDD|376704
NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein	unknown	unknown	gnl|CDD|119401

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase	gnl|CDD|366291	pfam00762, Ferrochelatase, Ferrochelatase.	1.16652e-72
NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl|CDD|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NC_009523.1|WP_011958760.1|5112379_5113096_-|NTP-transferase-domain-containing-protein	gnl|CDD|133048	cd06426, NTP_transferase_like_2, NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	4.89994e-95
NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.20323e-31
NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NC_009523.1|WP_011958761.1|5113098_5114085_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|275033	TIGR04180, NAD-dependent_epimerase/dehydratase, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family. This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster.	6.9968e-172
NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.82192e-49
NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187570	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs. GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.8945e-64
NC_009523.1|WP_011958763.1|5115190_5116015_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|372616	pfam13489, Methyltransf_23, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.12946e-25
NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein	gnl|CDD|378280	pfam09862, DUF2089, Protein of unknown function (DUF2089). This domain, found in various hypothetical prokaryotic proteins, has no known function. This domain is a zinc-ribbon.	0.0080333
NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.61808e-50
NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	0.000102874
NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase	gnl|CDD|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.02336e-40
NC_009523.1|WP_011958762.1|5114136_5115180_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	1.21137e-29
NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein	gnl|CDD|197891	smart00818, Amelogenin, Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth. They seem to regulate formation of crystallites during the secretory stage of tooth enamel development and are thought to play a major role in the structural organisation and mineralisation of developing enamel. The extracellular matrix of the developing enamel comprises two major classes of protein: the hydrophobic amelogenins and the acidic enamelins. Circular dichroism studies of porcine amelogenin have shown that the protein consists of 3 discrete folding units: the N-terminal region appears to contain beta-strand structures, while the C-terminal region displays characteristics of a random coil conformation. Subsequent studies on the bovine protein have indicated the amelogenin structure to contain a repetitive beta-turn segment and a "beta-spiral" between Gln112 and Leu138, which sequester a (Pro, Leu, Gln) rich region. The beta-spiral offers a probable site for interactions with Ca2+ ions. Muatations in the human amelogenin gene (AMGX) cause X-linked hypoplastic amelogenesis imperfecta, a disease characterised by defective enamel. A 9bp deletion in exon 2 of AMGX results in the loss of codons for Ile5, Leu6, Phe7 and Ala8, and replacement by a new threonine codon, disrupting the 16-residue (Met1-Ala16) amelogenin signal peptide.	6.14634e-10
NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase	gnl|CDD|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	9.47854e-27
NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein	gnl|CDD|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	4.73133e-94
NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein	gnl|CDD|119401	cd06662, SURF1, SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring complex of the respiratory chain, is an assemblage of nuclear and mitochondrially-encoded subunits. Its assembly is mediated by nuclear encoded assembly factors, one of which is Surf1/Shy1. Mutations in human Surf1 are a major cause of Leigh syndrome, a severe neurodegenerative disorder.	1.57314e-60

Protein sequences

>NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein
MRLERFTEKAQEAFQDAQEIMHDQHHTQLDVEHIFLAMLRQRDGLTARAIARLGVDADMVARRVEHELEKSPKVYGQYGYGNQVYITPRTQRLVKRAEEEANRLNDQYVGIEHLLIAISGEREGASSRILNSFGIDQERIYQALMDIRGHQRADNPSAEARYEALSKYSIDLTDLAAQGKLDPVIGRDAEITRVIRILCRRTKNNPVLVGETGVGKTAIAEGLAQRIASGDVPLPLKNRRLLALDLAGMVAGSKFRGEFEERLKAVMDEVRSSEGQIILFIDELHTVVGAGAAVGSIDASNMLKPALSRGEVQVIGATTIDEYRKHVEKDAALERRFSPVFVEEPDVETTVEMLRGLRKRYEEHHQLTISDEALQAAARLSSRYITDRFLPDKAIDLIDEASAKLRIDIYSMPKALREQEAELNRLRREEEEAGARREYERAAMLRARYLQLETEFEHARSEWLKSSNLDEVVDEEDVAAIVSTWTGIPVNRMLETEREKLIDMEARLHERVIGQHEAIVALSDAIRRARSGLKDPRRPIGSFIFVGPTGVGKTELAKALAEFLFDSEDAMTRVDMSEFQERHTVSRLIGAPPGYVGYEEAGQLTESIRRRPYQVVLFDEIEKAHPDVFNTLLQLLDDGRLTDAQGHTVDFRNTVIIMTSNVGTEHVRQQSLGLVRTHDRNAEEAARERVFEALRQAFRPEFLNRIDEIIVFHALTEQELMQIVDLLVREVDERLREQGLTLELTPTAKKLLVREGYNPAYGARPLRRTVQRLVETPLSRNLLRGLFKPGDTILVDVDPQTDALTFTRRETLDLEVKKPVEPVSG
>NC_009523.1|WP_011958752.1|5099098_5099557_-|hypothetical-protein
MLVLSILGVIACILFIIAIILLIVFLILKFAAHLDERFYYNFFRTSLVMLAAVLLVFGGSYWYDEATKSGGDMLNGLILMMTGGIIFVGLIAYTIWKTNLFYAILITLVQIGVAALLAFFGMIALIIAAGLLFLYILFELGSTQTVHVVNED
>NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein
MTSYESNRLDLPDPVVTARGRGVTGMEYQIIGTTMQAVILELDPGETVYSESGAMSWMSGNIQMATNTRGGGLGGMFKRAISGESLFLNEFTSVGGKGIVAFASDFPGKIVPVALAEGQMMIVQKQAFLCAEKTVGLDIHFRKRLGAGFFGGEGFIMQKLTGPGIAFVCLDGEIVEYTLDAGQVLKVDTGHVAMYEPTVEFDIEMVKGFKNILLGGEGLFLTTLRGPGRVWLQTMPTANLAKAIAPYIVTSSS
>NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MATTTARRWPGRRALVTAVGLVLIVAACAAGVFFLRGGQQTPVRSYGLVNPRFDRLIATVNATGQIAPVQTVNLSFAVTGRVAEVLVRPGDPVEKGQPLARLDTRELELRLAQAEAQLAQAQANLDRLLAGPLSAEIAAAEAQLAQAAGQLRQVEGSVTVADMRAAEEQLRQAEARLNQLLNGPRESDVQTAEARIREAELNLERQRTQLSTAKTNAQIQLEQAVNQLTQAQSRYSTAKQNWEYVRETGADPIVRTVADPNRPGQTRPNILNDSQRQQYYDAFVQAEATLRSAENAVAQAQVNYDNARLAEANGVELAEGQLAVARANRDLLFATPEPDVLAAARAQVASARAALDRMRGDQRGGQLEAARAAFEAAKANLERLRADPRPADLAAARAQVDAARAARDLARLTLDEAVLKAPFNGVVAEVNLKVGEAPSPGRPAIVLANLERFYVDVTVDEIDIIRVSVGQPVTLTLDALPEVTLAATVETIGPLALPQAAVTSYQVRIGIPNTDPRVRAGMSVGADIVVAERDNVLLVPRRAVRSDRGRLLVDVVRDPGLCALPPEQRPARPDLEAREVTVGLSNDQVIEIVSGLDPQACVYVEGVDQRFTFFTGPPRTR
>NC_009523.1|WP_049767554.1|5095065_5095680_-|hypothetical-protein
MTREEVLANVLDPVRWATPEVLMEIIKTPSLRGIVYGYVAEYEFMRYLREDLRIKDYHRDDDHKKTKSDLNFTYHGRRYSVQIKCLQTNSIKLVNGIFHAVVQNDASDRRKVKLPNGEEIETTCYVAGEYDILVSTVQPFTGSWKFVFKKNKDLSKSKYHRYTEEQRKYLLATQEPITYPVEVSGWTYDLLSLLSDSDLGQSKT
>NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase
MSDTRIKKKRVVRNGVATSNVIQSAHVGGNEDVFPLILQLHVPRGSIVADVTWGKGVFWKNVPKDDYDVRATDIKMGVDCRNLPYRDGEIDCVVLDPPYMESLLRKNVDHFGGSGTYAAFRDSYSNGKVVGDSEAKWHDAVLDLYYKAADEAYRVLRKRGILIVKCQDEVSAGKQRLTHVEIINEYERKGFVVKDLFVVVRKNSASVSRIVRQLHARKNHSYFLVFIKR
>NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase
MNHEDILQTGVLVLEYGEPATLDDIVPYLTAHYHGHPPSPEDIAYMRERCQRVWSGTSGDSAARRLAAALDDELRQRYGSRFQVVLGARHWHPTVADALAHLVQTGIQYVLVLPLSPVASQMSLRSYQETLEHAQTEVAQPVRLHLIPDWPDLPGYRSALTINATLALERLPDCDRSRTALLAIAHSVAESARKPETEYQWRLRQTMQRLVSTLGCGAGYLAYYGAGGPGQWLGPDVLSALDEIARAGLRHVLAVPINTVYDNVEVCYELDVRMAERAAALGLGYVRAAIPNAVPALIADLATLVAQTAAVFQN
>NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGPREAGEVLLHGLGRLEYRGYDSAGIAVDDGRQLQLRRSVGKLANLAAQLREQPVAGRCGIGHTRWATHGGVTEENAHPHRDASGEIVVIQNGIVENYLELKERLIAHGHQFASQTDTEVIARLLGEYYDETGSLEQAMRRTLGELRGGNAVVAMTRREPGRIIAARLGHAGGIVIGVGDDEMFVASDVPAILDYTRRVIFLDDREIAVIDAGGATISRLDGTPVARPPVTIPWDPVSAAKGDYKHFMQKEIFEQPRALTDVLRGRIDLDHGAVLLDELAFDEQELRQLERIYAVGCGTAWHAALVAKFAIETLARLRVEVDYGSEFRYRDPLIGERAAVLAITQSGETVDTLAAMEEARRQRAKSIAIVNAVGSQAARLADGGAIYLHAGPEIGVASTKAFTTMLVASYLLALRLGAARSVIATDEVRRYIQALIELPGKVERILERQEIYEELAERYHNARDALYLGRQVNYPVALEGALKLKEISYIHAEGYPAGEMKHGPIALIDRDLPVVCIAMRDSVYEKMISNVEQVRARGGHVIAIAAEGDALIASKADYVIEVPQTLPLLTPVLTSVPMQLLAYHVAVRRGCDVDQPRNLAKSVTVE
>NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein
MPVQQVSVGETPHVRFGRCAGSLRVEPGETGIVEVWTEADEGVVLERDDQGVVIQGMITGDCRLRAPSAATVSGEVVEDGVFVAGMISFSLNSAGDDVRIEGVSGTVTIGHVEGDLVVTRAATLRVGNVEGSAQITAVEGAVVVRRVEDDLTINDAGSVEVQYVDGDLHLSGVRDDALFERIDGDATIERVERLRVTDTIDGDVRINRSGVIVLNDVAGDVGVDEVQSLTVGAISGTLHADGVAEVVRFRDLDGDLRLRRSERAAVEGGSVSGDVRIEQTRAVMLGSVGDNADMRAISGNVSIGSVGGDATCIDIGGVLNAGSIGGDLTLRSVSSATHIGNIGGDLTLAMRFAPDSTMKLNVGGDARVELLPDASLTLRATVGGTVRGPGVAASGGMFSAVYGEGAALLELLVGGDLSLRGPAPRRMSAMGEGASQSASAGQPPDDDIGRWAERFAEEMGRWGEQFGRDMSRWAEEFSREMGGRGDEWARRSQRKAERLRQRIERDMREAAERARERAQREGHPREVHVRINDREWRFDEERLERMKREAAAAAQAGIIGAIEAVERALESLGIPRSRPPHPPHPPHPPGPPHPSQPPHPPHPPHPPGPPHPSQPPHPPHPPGPPHPPEAATGATIRINVTQAPDASAPADEPAQAKAPEQAASPSGATLEEQRAAILRMVADGRITPEEADLLLEALGTDQERPFRNDDRTGM
>NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein
MAMTDDRLRILRMVEKGQISAEEGARLLDAITDDAARIRAEARSRSLRIVVTDLNSRRQKINVTIPASLVSVGLKLGARLFPRNAGVTNDDVLRAIARDTPGRIFELQDLEEGERIEIFVE
>NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein
MVRYIFTGKRLIATFLVLIGAVALCGLGMWQLDRHSQRAALNARIAAGLAQPPVALETVDDLQSLDYRPVTARGAFDPTHEVLLRNRSFNGVTGYHVITPLRLSGRNEAVLVDRGWIPLTEASPEARRKFAPPAGEMVVTGIARQPETYVGGPQDPPLSPERPRLDAWFRVDVARIQEQTPYPLLPLFIEVQPIPGAEPTLPQPVPLPELDQGPHLGYAIQWFAFAGILVVGYVVLQRNTLRGEG
>NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase
MEHFTSHDLHLSDVRLHLYRGGHGPAVVLVHGLTDHARYWAPLARALAGEYDVIAYDARGHGLSDPSPNGYHLDLLAADLAALVEALGLMRPAVIGHSMGASTAAIAAATHPGMFRCVILEDPPWRSALPADMPDVTTTRATWREDLLAMKTMDDAALLARCRAESPGWSDEDYALWMESKKAVNPDALDVLPSFVRLWPEDVRRIDCPLLILTGEPERGALFDPGAEQIVRQVRPDVQVVRIPGAGHQVRREGFVAYLNAVKRFLKDAA
>NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase
MSHPQTQPENATVNAADTLRVSVVIPCYRQAQFLPEAVASVVAQTFTDWEIIIVDDGSPDDTAAVAQRLIAAHPDRRIRLIRQENRGLAEARNAGIRVARAPYILPLDADDMLEPEMLAQTVAALDAHPEVGFVYTDVRRFGAENNILRTRPYSLDHLRFENLMMPATLFRREAWEQVGGFRTFKPVQGYEDRDFWVSLAEAGWEGLHIAQPLLRYRRTAGSMLSTARRYDLELRARIFLDHWRLYEPDALAWARRVTSPAWSVDGKLRSPWHWLLAYLGYLALIRRYYPSLLLSSLVHPLFWRLPISWQGRLRALARLARLQR
>NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase
MRFPPHPLDPARPVYGYAPADPSAQPVVSIVTPCYNAGAMFLDTIASVLRQSLQQWEWIIVNDGSDDAATLRVLGALRASPDPRIRVVDQPNYGPAAARNAGVAVSRAPLLFFLDSDDLLAPTALEQLAWALTAHPEVAAVTTWYVLFGAMQGLLRRGFASRHTFPHDNPLTVSVMLRRTAFERIGGFDESLRHGLEDYEFWVRLADAGMWGCNIHEALVWIRRKSADMYRGYRWNFQTDRAALARMRRALRARYPRVFRDGPPRPPGEPSPILQPHPLIMPDPPFENRLAPRGERRVLLLLPWVEVGGADRFSIDLADGLRARNCRVTACLLRPSANPWKHELIMAAHEVFDLPLFLAFADYPRFLRYLVESRGITTVVVHNDLFAYRLLPFLRAWCPQVTVIDFLHIVQDHYHGGVPRAALEYRSLIDLHVAASHQVREWMVAHGADPERVDVCSINVDTQRWKPDPALRDRVRAELGLRVDEPVVLFVGRLVPQKRPRLVVEIARALVERGVHCTFLVIGDGPDRGWMQRFVRRHRLEGRVRLLGSVSSTRVREMMAAGDLLVLPSESEGIAFVLFEAMAMALVPVAADVGGQRELVTPECGVLIPPGGDQVAQYVTALERLIADPSQRAAMAMAARTRVVERFDRRQMIDCMLARIERAETLARTAPRPLVDRDLGLASASLAIEYLQFREALLRLAPVRRARAVRWSSAWLRLARLMRMRAWVDRFDRRIYVLRREVMWRIKRALGRAYNR
>NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase
MNADYQSRYSYAPADPSADPDVLVVTLVVSVTDLARQEMALRAQSLQSWQWVIVCLPALAEGLLHLATDPRVRVIPEMHPASASRHLVQSSSCRFVCTLSADTALDPTFLEKAAWFLATNPHVACCNAYTRDESGALWSYGFEQGDRFLDTNYAGATALFFKEDLLATGLPLPINNDDAWEIWLQLADQGKWGFTIPQPLILSLYPLSMPPFQSRDPSHHTIQRDRLRARYGTLHGRFPHVGLTDATPFEAISDAPVLANHLAKSTTTKRILMIVPWLIVGGAERVNLNLISYLTQKGFEVSIVTTLIRQQHPWLSEFERFTPDIFILDLFLRLPEFPRFIVYLIRSRGIDTVIVANSYLGYQLLPFLRSHFPETVFVDLLHSYEEMWKNGGYPRASVGYQSQLDLTIVTGGHVKRWMVARGADPERIHICYTNVDVDRWRPDPQRRAEMRISLGLEEDDLLIVLIGRLTSEKRPLLFAPIIAALRKKTASRFLTLVLGDGPLRGQVERQIRELRLSDVMRALGRVNDDEVFGYLAAADVFLIPSQTEGVSVATMEAMAMGVVPVSADVGGQGELITADCGVLIPHGPHEVDEYARVLARFADDPDMRRRMGQAARKRVERHFALRDFGPRMEALLEQAWELHHTAPRVVIPIELAREWAAQIIEYTRQEMSLDEIWAERESWRSNPRPHPSLAIPLRQSFRRRVLRFVWAQVAHLYRWGVSRNMRWLVPLKERLVSEVYRRGW
>NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein
MRLLITGIGGFVGRHMAVYAVTRGATVVGINRTMRPVPGAELFVADLDSASATADAVKAAAAEAVIHLAAHTPANCPQLPLQEWLTGTPVATLNLLEAVRIHCPRAKVLIVSSSAVYGQVPLDRLPVTEDHPVQPATMYGVSKAIQELLAIRYVSEYGLQVIRARPFNLVGPGEPRGMLTSTLAAQITAIAAGKQPPVVRMRHRATSRDFTDVRDAVAAYWALLERGEPGGVYNVCSGTATPVGDIVERLLRLAGIDAAVEETGAHTSGDILIQAGSAARLTAATGWRPRFDLDASLRDLLATFAS
>NC_009523.1|WP_011958760.1|5112379_5113096_-|NTP-transferase-domain-containing-protein
MKAVILAGGRGTRLAPYTTILPKPLMPIGDKPILDIVIRQLRYYGFTDITLAVGYLAELLVAYFGDGDRFGVTIRYSREEQPLGTAGPIALVDGLDEPFLVMNGDVLTTLNFSELMAFHRSSGAIATIATYPRSVKIDLGVIEHNEHGLLTRYIEKPTHYYRVSMGIYIFDPRACTYIPRGHRLDLPDLLIDMMQKGEKIQCYLHDGYWLDIGRVDDYQQAVEDFEQRRERFLPFELE
>NC_009523.1|WP_011958761.1|5113098_5114085_-|SDR-family-NAD(P)-dependent-oxidoreductase
MVSTDTVLVTGAGGFIGSHLVEALVARGFRVRAFVRYNGRGDPGLLRDLPSDMRAQIEIIFGDLRDSHAVHEATRGVDTIFHLGALIAIPYSYVHPRETVETNIIGTLNVLEAARAHGVRRVVHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADKLVESFHLSFGVPTVTVRPFNTYGPRQSARAVIPTIITQALTRSVVRLGDLRPTRDLNYVSDTVAGFLAAAERDQAIGQAINLASNDEISIGELAEKIIALVGRQVTIDVDESRLRPETSEVFRLHGDNRLAHELLGWKPLVSLDEGLRRTIDWIAQHIDRYDPLHYQV
>NC_009523.1|WP_011958762.1|5114136_5115180_-|flippase-like-domain-containing-protein
MLNSNFMRNILFHRSWWLSLAFIISSATLVLALRDVDLCRSFTIVQHANPGLLALAGIVFSGSYVVRALRWYMLLENECNMKPRVVFWATTIGYLYNSLLPARAGDVIRALAVSYWTGVSKSFVLASVFVERIAEVTGIALVSLLVLSVTEGAPDWINMAARLMTILSGVGIAILFLVPDVGKRIGRSLSITPVHHPRCERVIQTFQQVLRGFRTLRDAMQVARLAVVTMMIWFLETWFTILIAQALGLPIGGAIGLLLLCALSLASVVPSTPGSIGVFQFVAVTMLTPFGFSPDDAIAYIVMFQLVQYLMVMIWGGFGLWRLAASGLSLRRLREETTTIRQEVNHD
>NC_009523.1|WP_011958763.1|5115190_5116015_-|class-I-SAM-dependent-methyltransferase
MPTCIVCRSTQHLLFYEGILRCSECGHVFADVTLDDERLWSIYRRDYFFGEEYSDYVADQRVIQKNFRKRLSVLRRFINPEKHSRLLEIGCAYGFFLDLVRKQFKIAVGLDISEDGVRYAREELGVDAYQVDFLHYDCSPQIFDVICMWDTIEHIRDPHLYIEKASSVMSSGGLLALTTGDIESLLSRLQRERWRMIHPPTHIHYFSRRTIERLLRQYGFEIVYNRYCGFFRSIDNIFYNLFILRQKNHIFIILSENPVLVDLISILTYMILCL

Crispr_ID: NC_009523_93

• CRISPR_ID: NC_009523_93
• CRISPR_location: 5100215-5100317
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_93

Consensus_repeat	Method
CGGATTTATTTATTCAAAGACCATAAGCCCTCGGC	CRISPRCasFinder

spacers of NC_009523_93

>93.1|5100250|33|NC_009523|CRISPRCasFinder
TAGCCAGGGCGAAGCCCGCCTGCGCGGGCTATA

CRISPR arrays and Neighbor proteins around NC_009523_93

CRISPR arrays

The CRISPR arrays of NC_009523_93

>merge|NC_009523|93|5100215-5100317|CRISPRCasFinder
CGGATTTATTTATTCAAAGACCATAAGCCCTCGGCTAGCCAGGGCGAAGCCCGCCTGCGCGGGCTATACCGGATTATTTATTCAAAGACCATAAGCCCTCGGC

>NC_009523|93|89|5100215-5100317|CRISPRCasFinder
CGGATTTATTTATTCAAAGACCATAAGCCCTCGGC	TAGCCAGGGCGAAGCCCGCCTGCGCGGGCTATA
CCGGATTATTTATTCAAAGACCATAAGCCCTCGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase	unknown	unknown	gnl|CDD|366291
NC_009523.1|WP_011958752.1|5099098_5099557_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958760.1|5112379_5113096_-|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|133048
NC_009523.1|WP_011958762.1|5114136_5115180_-|flippase-like-domain-containing-protein	unknown	unknown	gnl|CDD|377103
NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein	unknown	unknown	gnl|CDD|274529
NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl|CDD|234729
NC_009523.1|WP_011958761.1|5113098_5114085_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|275033
NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187570
NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein	unknown	unknown	gnl|CDD|378280
NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase	unknown	unknown	gnl|CDD|133055
NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein	unknown	unknown	gnl|CDD|197891
NC_009523.1|WP_049767554.1|5095065_5095680_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|366166
NC_009523.1|WP_011958744.1|5087361_5087724_+|DUF2089-domain-containing-protein	unknown	unknown	gnl|CDD|378280
NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein	unknown	unknown	gnl|CDD|376704
NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein	unknown	unknown	gnl|CDD|119401

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase	gnl|CDD|366291	pfam00762, Ferrochelatase, Ferrochelatase.	1.16652e-72
NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl|CDD|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NC_009523.1|WP_011958760.1|5112379_5113096_-|NTP-transferase-domain-containing-protein	gnl|CDD|133048	cd06426, NTP_transferase_like_2, NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	4.89994e-95
NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.20323e-31
NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NC_009523.1|WP_011958761.1|5113098_5114085_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|275033	TIGR04180, NAD-dependent_epimerase/dehydratase, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family. This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster.	6.9968e-172
NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.82192e-49
NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187570	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs. GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.8945e-64
NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein	gnl|CDD|378280	pfam09862, DUF2089, Protein of unknown function (DUF2089). This domain, found in various hypothetical prokaryotic proteins, has no known function. This domain is a zinc-ribbon.	0.0080333
NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.61808e-50
NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	0.000102874
NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase	gnl|CDD|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.02336e-40
NC_009523.1|WP_011958762.1|5114136_5115180_-|flippase-like-domain-containing-protein	gnl|CDD|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	1.21137e-29
NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein	gnl|CDD|197891	smart00818, Amelogenin, Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth. They seem to regulate formation of crystallites during the secretory stage of tooth enamel development and are thought to play a major role in the structural organisation and mineralisation of developing enamel. The extracellular matrix of the developing enamel comprises two major classes of protein: the hydrophobic amelogenins and the acidic enamelins. Circular dichroism studies of porcine amelogenin have shown that the protein consists of 3 discrete folding units: the N-terminal region appears to contain beta-strand structures, while the C-terminal region displays characteristics of a random coil conformation. Subsequent studies on the bovine protein have indicated the amelogenin structure to contain a repetitive beta-turn segment and a "beta-spiral" between Gln112 and Leu138, which sequester a (Pro, Leu, Gln) rich region. The beta-spiral offers a probable site for interactions with Ca2+ ions. Muatations in the human amelogenin gene (AMGX) cause X-linked hypoplastic amelogenesis imperfecta, a disease characterised by defective enamel. A 9bp deletion in exon 2 of AMGX results in the loss of codons for Ile5, Leu6, Phe7 and Ala8, and replacement by a new threonine codon, disrupting the 16-residue (Met1-Ala16) amelogenin signal peptide.	6.14634e-10
NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase	gnl|CDD|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	9.47854e-27
NC_009523.1|WP_011958744.1|5087361_5087724_+|DUF2089-domain-containing-protein	gnl|CDD|378280	pfam09862, DUF2089, Protein of unknown function (DUF2089). This domain, found in various hypothetical prokaryotic proteins, has no known function. This domain is a zinc-ribbon.	2.46958e-53
NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein	gnl|CDD|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	4.73133e-94
NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein	gnl|CDD|119401	cd06662, SURF1, SURF1 superfamily. Surf1/Shy1 has been implicated in the posttranslational steps of the biogenesis of the mitochondrially-encoded Cox1 subunit of cytochrome c oxidase (complex IV). Cytochrome c oxidase (complex IV), the terminal electron-transferring complex of the respiratory chain, is an assemblage of nuclear and mitochondrially-encoded subunits. Its assembly is mediated by nuclear encoded assembly factors, one of which is Surf1/Shy1. Mutations in human Surf1 are a major cause of Leigh syndrome, a severe neurodegenerative disorder.	1.57314e-60

Protein sequences

>NC_009523.1|WP_011958752.1|5099098_5099557_-|hypothetical-protein
MLVLSILGVIACILFIIAIILLIVFLILKFAAHLDERFYYNFFRTSLVMLAAVLLVFGGSYWYDEATKSGGDMLNGLILMMTGGIIFVGLIAYTIWKTNLFYAILITLVQIGVAALLAFFGMIALIIAAGLLFLYILFELGSTQTVHVVNED
>NC_009523.1|WP_011958751.1|5098264_5099026_+|TIGR00266-family-protein
MTSYESNRLDLPDPVVTARGRGVTGMEYQIIGTTMQAVILELDPGETVYSESGAMSWMSGNIQMATNTRGGGLGGMFKRAISGESLFLNEFTSVGGKGIVAFASDFPGKIVPVALAEGQMMIVQKQAFLCAEKTVGLDIHFRKRLGAGFFGGEGFIMQKLTGPGIAFVCLDGEIVEYTLDAGQVLKVDTGHVAMYEPTVEFDIEMVKGFKNILLGGEGLFLTTLRGPGRVWLQTMPTANLAKAIAPYIVTSSS
>NC_009523.1|WP_011958750.1|5096268_5098134_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MATTTARRWPGRRALVTAVGLVLIVAACAAGVFFLRGGQQTPVRSYGLVNPRFDRLIATVNATGQIAPVQTVNLSFAVTGRVAEVLVRPGDPVEKGQPLARLDTRELELRLAQAEAQLAQAQANLDRLLAGPLSAEIAAAEAQLAQAAGQLRQVEGSVTVADMRAAEEQLRQAEARLNQLLNGPRESDVQTAEARIREAELNLERQRTQLSTAKTNAQIQLEQAVNQLTQAQSRYSTAKQNWEYVRETGADPIVRTVADPNRPGQTRPNILNDSQRQQYYDAFVQAEATLRSAENAVAQAQVNYDNARLAEANGVELAEGQLAVARANRDLLFATPEPDVLAAARAQVASARAALDRMRGDQRGGQLEAARAAFEAAKANLERLRADPRPADLAAARAQVDAARAARDLARLTLDEAVLKAPFNGVVAEVNLKVGEAPSPGRPAIVLANLERFYVDVTVDEIDIIRVSVGQPVTLTLDALPEVTLAATVETIGPLALPQAAVTSYQVRIGIPNTDPRVRAGMSVGADIVVAERDNVLLVPRRAVRSDRGRLLVDVVRDPGLCALPPEQRPARPDLEAREVTVGLSNDQVIEIVSGLDPQACVYVEGVDQRFTFFTGPPRTR
>NC_009523.1|WP_049767554.1|5095065_5095680_-|hypothetical-protein
MTREEVLANVLDPVRWATPEVLMEIIKTPSLRGIVYGYVAEYEFMRYLREDLRIKDYHRDDDHKKTKSDLNFTYHGRRYSVQIKCLQTNSIKLVNGIFHAVVQNDASDRRKVKLPNGEEIETTCYVAGEYDILVSTVQPFTGSWKFVFKKNKDLSKSKYHRYTEEQRKYLLATQEPITYPVEVSGWTYDLLSLLSDSDLGQSKT
>NC_009523.1|WP_157041178.1|5094374_5095064_+|site-specific-DNA-methyltransferase
MSDTRIKKKRVVRNGVATSNVIQSAHVGGNEDVFPLILQLHVPRGSIVADVTWGKGVFWKNVPKDDYDVRATDIKMGVDCRNLPYRDGEIDCVVLDPPYMESLLRKNVDHFGGSGTYAAFRDSYSNGKVVGDSEAKWHDAVLDLYYKAADEAYRVLRKRGILIVKCQDEVSAGKQRLTHVEIINEYERKGFVVKDLFVVVRKNSASVSRIVRQLHARKNHSYFLVFIKR
>NC_009523.1|WP_011958748.1|5093064_5094009_+|ferrochelatase
MNHEDILQTGVLVLEYGEPATLDDIVPYLTAHYHGHPPSPEDIAYMRERCQRVWSGTSGDSAARRLAAALDDELRQRYGSRFQVVLGARHWHPTVADALAHLVQTGIQYVLVLPLSPVASQMSLRSYQETLEHAQTEVAQPVRLHLIPDWPDLPGYRSALTINATLALERLPDCDRSRTALLAIAHSVAESARKPETEYQWRLRQTMQRLVSTLGCGAGYLAYYGAGGPGQWLGPDVLSALDEIARAGLRHVLAVPINTVYDNVEVCYELDVRMAERAAALGLGYVRAAIPNAVPALIADLATLVAQTAAVFQN
>NC_009523.1|WP_011958747.1|5091194_5093039_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGPREAGEVLLHGLGRLEYRGYDSAGIAVDDGRQLQLRRSVGKLANLAAQLREQPVAGRCGIGHTRWATHGGVTEENAHPHRDASGEIVVIQNGIVENYLELKERLIAHGHQFASQTDTEVIARLLGEYYDETGSLEQAMRRTLGELRGGNAVVAMTRREPGRIIAARLGHAGGIVIGVGDDEMFVASDVPAILDYTRRVIFLDDREIAVIDAGGATISRLDGTPVARPPVTIPWDPVSAAKGDYKHFMQKEIFEQPRALTDVLRGRIDLDHGAVLLDELAFDEQELRQLERIYAVGCGTAWHAALVAKFAIETLARLRVEVDYGSEFRYRDPLIGERAAVLAITQSGETVDTLAAMEEARRQRAKSIAIVNAVGSQAARLADGGAIYLHAGPEIGVASTKAFTTMLVASYLLALRLGAARSVIATDEVRRYIQALIELPGKVERILERQEIYEELAERYHNARDALYLGRQVNYPVALEGALKLKEISYIHAEGYPAGEMKHGPIALIDRDLPVVCIAMRDSVYEKMISNVEQVRARGGHVIAIAAEGDALIASKADYVIEVPQTLPLLTPVLTSVPMQLLAYHVAVRRGCDVDQPRNLAKSVTVE
>NC_009523.1|WP_011958746.1|5088112_5090257_+|hypothetical-protein
MPVQQVSVGETPHVRFGRCAGSLRVEPGETGIVEVWTEADEGVVLERDDQGVVIQGMITGDCRLRAPSAATVSGEVVEDGVFVAGMISFSLNSAGDDVRIEGVSGTVTIGHVEGDLVVTRAATLRVGNVEGSAQITAVEGAVVVRRVEDDLTINDAGSVEVQYVDGDLHLSGVRDDALFERIDGDATIERVERLRVTDTIDGDVRINRSGVIVLNDVAGDVGVDEVQSLTVGAISGTLHADGVAEVVRFRDLDGDLRLRRSERAAVEGGSVSGDVRIEQTRAVMLGSVGDNADMRAISGNVSIGSVGGDATCIDIGGVLNAGSIGGDLTLRSVSSATHIGNIGGDLTLAMRFAPDSTMKLNVGGDARVELLPDASLTLRATVGGTVRGPGVAASGGMFSAVYGEGAALLELLVGGDLSLRGPAPRRMSAMGEGASQSASAGQPPDDDIGRWAERFAEEMGRWGEQFGRDMSRWAEEFSREMGGRGDEWARRSQRKAERLRQRIERDMREAAERARERAQREGHPREVHVRINDREWRFDEERLERMKREAAAAAQAGIIGAIEAVERALESLGIPRSRPPHPPHPPHPPGPPHPSQPPHPPHPPHPPGPPHPSQPPHPPHPPGPPHPPEAATGATIRINVTQAPDASAPADEPAQAKAPEQAASPSGATLEEQRAAILRMVADGRITPEEADLLLEALGTDQERPFRNDDRTGM
>NC_009523.1|WP_011958745.1|5087734_5088100_+|hypothetical-protein
MAMTDDRLRILRMVEKGQISAEEGARLLDAITDDAARIRAEARSRSLRIVVTDLNSRRQKINVTIPASLVSVGLKLGARLFPRNAGVTNDDVLRAIARDTPGRIFELQDLEEGERIEIFVE
>NC_009523.1|WP_011958744.1|5087361_5087724_+|DUF2089-domain-containing-protein
MNPLLTTCPVCGEALHVIRLECDACHTAIEGRFTLGRLGRLSREQLEFVELLLKNRGNINGVAGDLKVAYNTARSRLDEIVAALGYGPPAADARPDRRAILDRLAAKEISVEEALRLLKS
>NC_009523.1|WP_011958753.1|5100604_5103082_+|AAA-domain-containing-protein
MRLERFTEKAQEAFQDAQEIMHDQHHTQLDVEHIFLAMLRQRDGLTARAIARLGVDADMVARRVEHELEKSPKVYGQYGYGNQVYITPRTQRLVKRAEEEANRLNDQYVGIEHLLIAISGEREGASSRILNSFGIDQERIYQALMDIRGHQRADNPSAEARYEALSKYSIDLTDLAAQGKLDPVIGRDAEITRVIRILCRRTKNNPVLVGETGVGKTAIAEGLAQRIASGDVPLPLKNRRLLALDLAGMVAGSKFRGEFEERLKAVMDEVRSSEGQIILFIDELHTVVGAGAAVGSIDASNMLKPALSRGEVQVIGATTIDEYRKHVEKDAALERRFSPVFVEEPDVETTVEMLRGLRKRYEEHHQLTISDEALQAAARLSSRYITDRFLPDKAIDLIDEASAKLRIDIYSMPKALREQEAELNRLRREEEEAGARREYERAAMLRARYLQLETEFEHARSEWLKSSNLDEVVDEEDVAAIVSTWTGIPVNRMLETEREKLIDMEARLHERVIGQHEAIVALSDAIRRARSGLKDPRRPIGSFIFVGPTGVGKTELAKALAEFLFDSEDAMTRVDMSEFQERHTVSRLIGAPPGYVGYEEAGQLTESIRRRPYQVVLFDEIEKAHPDVFNTLLQLLDDGRLTDAQGHTVDFRNTVIIMTSNVGTEHVRQQSLGLVRTHDRNAEEAARERVFEALRQAFRPEFLNRIDEIIVFHALTEQELMQIVDLLVREVDERLREQGLTLELTPTAKKLLVREGYNPAYGARPLRRTVQRLVETPLSRNLLRGLFKPGDTILVDVDPQTDALTFTRRETLDLEVKKPVEPVSG
>NC_009523.1|WP_011958754.1|5103599_5104337_+|SURF1-family-protein
MVRYIFTGKRLIATFLVLIGAVALCGLGMWQLDRHSQRAALNARIAAGLAQPPVALETVDDLQSLDYRPVTARGAFDPTHEVLLRNRSFNGVTGYHVITPLRLSGRNEAVLVDRGWIPLTEASPEARRKFAPPAGEMVVTGIARQPETYVGGPQDPPLSPERPRLDAWFRVDVARIQEQTPYPLLPLFIEVQPIPGAEPTLPQPVPLPELDQGPHLGYAIQWFAFAGILVVGYVVLQRNTLRGEG
>NC_009523.1|WP_011958755.1|5104412_5105225_+|alpha/beta-hydrolase
MEHFTSHDLHLSDVRLHLYRGGHGPAVVLVHGLTDHARYWAPLARALAGEYDVIAYDARGHGLSDPSPNGYHLDLLAADLAALVEALGLMRPAVIGHSMGASTAAIAAATHPGMFRCVILEDPPWRSALPADMPDVTTTRATWREDLLAMKTMDDAALLARCRAESPGWSDEDYALWMESKKAVNPDALDVLPSFVRLWPEDVRRIDCPLLILTGEPERGALFDPGAEQIVRQVRPDVQVVRIPGAGHQVRREGFVAYLNAVKRFLKDAA
>NC_009523.1|WP_157041179.1|5105306_5106281_-|glycosyltransferase
MSHPQTQPENATVNAADTLRVSVVIPCYRQAQFLPEAVASVVAQTFTDWEIIIVDDGSPDDTAAVAQRLIAAHPDRRIRLIRQENRGLAEARNAGIRVARAPYILPLDADDMLEPEMLAQTVAALDAHPEVGFVYTDVRRFGAENNILRTRPYSLDHLRFENLMMPATLFRREAWEQVGGFRTFKPVQGYEDRDFWVSLAEAGWEGLHIAQPLLRYRRTAGSMLSTARRYDLELRARIFLDHWRLYEPDALAWARRVTSPAWSVDGKLRSPWHWLLAYLGYLALIRRYYPSLLLSSLVHPLFWRLPISWQGRLRALARLARLQR
>NC_009523.1|WP_041335945.1|5106692_5108963_-|glycosyltransferase
MRFPPHPLDPARPVYGYAPADPSAQPVVSIVTPCYNAGAMFLDTIASVLRQSLQQWEWIIVNDGSDDAATLRVLGALRASPDPRIRVVDQPNYGPAAARNAGVAVSRAPLLFFLDSDDLLAPTALEQLAWALTAHPEVAAVTTWYVLFGAMQGLLRRGFASRHTFPHDNPLTVSVMLRRTAFERIGGFDESLRHGLEDYEFWVRLADAGMWGCNIHEALVWIRRKSADMYRGYRWNFQTDRAALARMRRALRARYPRVFRDGPPRPPGEPSPILQPHPLIMPDPPFENRLAPRGERRVLLLLPWVEVGGADRFSIDLADGLRARNCRVTACLLRPSANPWKHELIMAAHEVFDLPLFLAFADYPRFLRYLVESRGITTVVVHNDLFAYRLLPFLRAWCPQVTVIDFLHIVQDHYHGGVPRAALEYRSLIDLHVAASHQVREWMVAHGADPERVDVCSINVDTQRWKPDPALRDRVRAELGLRVDEPVVLFVGRLVPQKRPRLVVEIARALVERGVHCTFLVIGDGPDRGWMQRFVRRHRLEGRVRLLGSVSSTRVREMMAAGDLLVLPSESEGIAFVLFEAMAMALVPVAADVGGQRELVTPECGVLIPPGGDQVAQYVTALERLIADPSQRAAMAMAARTRVVERFDRRQMIDCMLARIERAETLARTAPRPLVDRDLGLASASLAIEYLQFREALLRLAPVRRARAVRWSSAWLRLARLMRMRAWVDRFDRRIYVLRREVMWRIKRALGRAYNR
>NC_009523.1|WP_011958758.1|5109216_5111451_-|glycosyltransferase
MNADYQSRYSYAPADPSADPDVLVVTLVVSVTDLARQEMALRAQSLQSWQWVIVCLPALAEGLLHLATDPRVRVIPEMHPASASRHLVQSSSCRFVCTLSADTALDPTFLEKAAWFLATNPHVACCNAYTRDESGALWSYGFEQGDRFLDTNYAGATALFFKEDLLATGLPLPINNDDAWEIWLQLADQGKWGFTIPQPLILSLYPLSMPPFQSRDPSHHTIQRDRLRARYGTLHGRFPHVGLTDATPFEAISDAPVLANHLAKSTTTKRILMIVPWLIVGGAERVNLNLISYLTQKGFEVSIVTTLIRQQHPWLSEFERFTPDIFILDLFLRLPEFPRFIVYLIRSRGIDTVIVANSYLGYQLLPFLRSHFPETVFVDLLHSYEEMWKNGGYPRASVGYQSQLDLTIVTGGHVKRWMVARGADPERIHICYTNVDVDRWRPDPQRRAEMRISLGLEEDDLLIVLIGRLTSEKRPLLFAPIIAALRKKTASRFLTLVLGDGPLRGQVERQIRELRLSDVMRALGRVNDDEVFGYLAAADVFLIPSQTEGVSVATMEAMAMGVVPVSADVGGQGELITADCGVLIPHGPHEVDEYARVLARFADDPDMRRRMGQAARKRVERHFALRDFGPRMEALLEQAWELHHTAPRVVIPIELAREWAAQIIEYTRQEMSLDEIWAERESWRSNPRPHPSLAIPLRQSFRRRVLRFVWAQVAHLYRWGVSRNMRWLVPLKERLVSEVYRRGW
>NC_009523.1|WP_011958759.1|5111459_5112380_-|NAD-dependent-epimerase/dehydratase-family-protein
MRLLITGIGGFVGRHMAVYAVTRGATVVGINRTMRPVPGAELFVADLDSASATADAVKAAAAEAVIHLAAHTPANCPQLPLQEWLTGTPVATLNLLEAVRIHCPRAKVLIVSSSAVYGQVPLDRLPVTEDHPVQPATMYGVSKAIQELLAIRYVSEYGLQVIRARPFNLVGPGEPRGMLTSTLAAQITAIAAGKQPPVVRMRHRATSRDFTDVRDAVAAYWALLERGEPGGVYNVCSGTATPVGDIVERLLRLAGIDAAVEETGAHTSGDILIQAGSAARLTAATGWRPRFDLDASLRDLLATFAS
>NC_009523.1|WP_011958760.1|5112379_5113096_-|NTP-transferase-domain-containing-protein
MKAVILAGGRGTRLAPYTTILPKPLMPIGDKPILDIVIRQLRYYGFTDITLAVGYLAELLVAYFGDGDRFGVTIRYSREEQPLGTAGPIALVDGLDEPFLVMNGDVLTTLNFSELMAFHRSSGAIATIATYPRSVKIDLGVIEHNEHGLLTRYIEKPTHYYRVSMGIYIFDPRACTYIPRGHRLDLPDLLIDMMQKGEKIQCYLHDGYWLDIGRVDDYQQAVEDFEQRRERFLPFELE
>NC_009523.1|WP_011958761.1|5113098_5114085_-|SDR-family-NAD(P)-dependent-oxidoreductase
MVSTDTVLVTGAGGFIGSHLVEALVARGFRVRAFVRYNGRGDPGLLRDLPSDMRAQIEIIFGDLRDSHAVHEATRGVDTIFHLGALIAIPYSYVHPRETVETNIIGTLNVLEAARAHGVRRVVHTSTSEVYGTARFVPITEEHPLQGQSPYSASKIGADKLVESFHLSFGVPTVTVRPFNTYGPRQSARAVIPTIITQALTRSVVRLGDLRPTRDLNYVSDTVAGFLAAAERDQAIGQAINLASNDEISIGELAEKIIALVGRQVTIDVDESRLRPETSEVFRLHGDNRLAHELLGWKPLVSLDEGLRRTIDWIAQHIDRYDPLHYQV
>NC_009523.1|WP_011958762.1|5114136_5115180_-|flippase-like-domain-containing-protein
MLNSNFMRNILFHRSWWLSLAFIISSATLVLALRDVDLCRSFTIVQHANPGLLALAGIVFSGSYVVRALRWYMLLENECNMKPRVVFWATTIGYLYNSLLPARAGDVIRALAVSYWTGVSKSFVLASVFVERIAEVTGIALVSLLVLSVTEGAPDWINMAARLMTILSGVGIAILFLVPDVGKRIGRSLSITPVHHPRCERVIQTFQQVLRGFRTLRDAMQVARLAVVTMMIWFLETWFTILIAQALGLPIGGAIGLLLLCALSLASVVPSTPGSIGVFQFVAVTMLTPFGFSPDDAIAYIVMFQLVQYLMVMIWGGFGLWRLAASGLSLRRLREETTTIRQEVNHD

Crispr_ID: NC_009523_95

• CRISPR_ID: NC_009523_95
• CRISPR_location: 5132665-5132756
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_95

Consensus_repeat	Method
TAGCCGAGGGCTTATGGTCTTTGA	CRISPRCasFinder

spacers of NC_009523_95

>95.1|5132689|44|NC_009523|CRISPRCasFinder
AGAAATATTCCGCTCTAGCCCGCGCAGGCGGGCTTCGTCTCGTG

CRISPR arrays and Neighbor proteins around NC_009523_95

CRISPR arrays

The CRISPR arrays of NC_009523_95

>merge|NC_009523|95|5132665-5132756|CRISPRCasFinder
TAGCCGAGGGCTTATGGTCTTTGAAGAAATATTCCGCTCTAGCCCGCGCAGGCGGGCTTCGTCTCGTGTAGCCGAGGGCTTATGGTCTTTGA

>NC_009523|95|91|5132665-5132756|CRISPRCasFinder
TAGCCGAGGGCTTATGGTCTTTGA	AGAAATATTCCGCTCTAGCCCGCGCAGGCGGGCTTCGTCTCGTG
TAGCCGAGGGCTTATGGTCTTTGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_083763333.1|5128347_5130999_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|224057
NC_009523.1|WP_083763334.1|5132027_5132636_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_009523.1|WP_011958766.1|5120770_5122636_-|hypothetical-protein	unknown	unknown	gnl|CDD|224720
NC_009523.1|WP_011958775.1|5133434_5133869_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|376187
NC_009523.1|WP_157041180.1|5117006_5119466_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041182.1|5139287_5139626_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|376187
NC_009523.1|WP_011958768.1|5123449_5124199_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009523.1|WP_011958776.1|5133958_5135365_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NC_009523.1|WP_083763332.1|5124237_5125287_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|132997
NC_009523.1|WP_011958778.1|5138238_5138820_-|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl|CDD|380337
NC_009523.1|WP_011958777.1|5137048_5137900_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224596
NC_009523.1|WP_011958767.1|5122660_5123434_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133022
NC_009523.1|WP_011958770.1|5125244_5128343_-|glycosyltransferase	unknown	unknown	gnl|CDD|132997
NC_009523.1|WP_157041181.1|5135552_5135690_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958774.1|5133016_5133496_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_085979421.1|5119548_5120606_+|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577
NC_009523.1|WP_011958772.1|5131609_5132038_-|HEPN-domain-containing-protein	unknown	unknown	gnl|CDD|368314
NC_009523.1|WP_011958779.1|5138890_5139298_-|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|366864
NC_009523.1|WP_011958781.1|5139871_5140849_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187541
NC_009523.1|WP_085979421.1|5135874_5136932_+|IS5-like-element-ISRfsp3-family-transposase	unknown	unknown	gnl|CDD|372577

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_083763333.1|5128347_5130999_-|methyltransferase-domain-containing-protein	gnl|CDD|224057	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	9.22572e-110
NC_009523.1|WP_083763334.1|5132027_5132636_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	1.62815e-11
NC_009523.1|WP_011958766.1|5120770_5122636_-|hypothetical-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.29701e-05
NC_009523.1|WP_011958768.1|5123449_5124199_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.21304e-25
NC_009523.1|WP_011958776.1|5133958_5135365_-|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	6.02106e-47
NC_009523.1|WP_083763332.1|5124237_5125287_-|glycosyltransferase-family-2-protein	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	2.89712e-37
NC_009523.1|WP_011958778.1|5138238_5138820_-|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl|CDD|380337	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production. RmlC (deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-D-hexulose 3, 5-epimerase or dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; also known as RfbC) is a carbohydrate epimerase involved in the production of dTDP-L-rhamnose, a precursor of the bacterial cell wall constituent, L-rhamnose. L-Rhamnose (6-deoxy-l-mannose) plays an important role in the cell-wall structure of many bacterial species. It has been found to contribute to the virulence of several species, including the Gram-negative Salmonella enterica and Vibrio cholerae, where it is present as a part of the O-antigen, and is essential for the growth of Gram-positive bacteria such as Streptococcus pyogenes. RmlC converts dTDP-6-deoxy-D-xylo-4-hexulose to dTDP-6-deoxy-L-xylo-hexulose by catalyzing the epimerization of the 5-methyl and 3-hydroxyl groups of hexulose, the third of four steps in the dTDP-L-rhamnose biosynthetic pathway. RmlC belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.48794e-101
NC_009523.1|WP_157041182.1|5139287_5139626_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	5.13854e-13
NC_009523.1|WP_011958767.1|5122660_5123434_-|glycosyltransferase-family-2-protein	gnl|CDD|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.37903e-40
NC_009523.1|WP_011958770.1|5125244_5128343_-|glycosyltransferase	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	4.56714e-34
NC_009523.1|WP_011958777.1|5137048_5137900_-|ABC-transporter-permease	gnl|CDD|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	1.8616e-57
NC_009523.1|WP_011958775.1|5133434_5133869_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	1.77481e-14
NC_009523.1|WP_085979421.1|5119548_5120606_+|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36
NC_009523.1|WP_011958772.1|5131609_5132038_-|HEPN-domain-containing-protein	gnl|CDD|368314	pfam05168, HEPN, HEPN domain.	1.96899e-22
NC_009523.1|WP_011958779.1|5138890_5139298_-|DUF86-domain-containing-protein	gnl|CDD|366864	pfam01934, DUF86, Protein of unknown function DUF86. The function of members of this family is unknown.	3.43122e-20
NC_009523.1|WP_011958781.1|5139871_5140849_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187541	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs. UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.35819e-90
NC_009523.1|WP_085979421.1|5135874_5136932_+|IS5-like-element-ISRfsp3-family-transposase	gnl|CDD|372577	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.34924e-36

Protein sequences

>NC_009523.1|WP_083763334.1|5132027_5132636_-|nucleotidyltransferase-domain-containing-protein
MTDYYFKDHHFGHHVVSAIPRSVQPCPSGSTSGRTATIQYAELAGGLKPSAMEDEARLHGLEWSNCSKTIIAVFSARSAASMDQGDVLRIRRLLRQRRETHRAHLRQEVERLTGCAAALGVQRVILFGSLARDEDGLTSDLDLLIVWDTPLDFLERTVELYRRFQPRVATDLLVYTPVEMTWMSQTPLVRLALQEGRVLYEA
>NC_009523.1|WP_011958772.1|5131609_5132038_-|HEPN-domain-containing-protein
MKRDARQEGLRWLEQAEADRYGAQLLFDGASYHLACFVAQQIAEKALKAFIYTQGEELVIGHSVEALCRWAAEFDADFEQLREEVASLDGYYIPTRYPNGLPDSIPARVYTQASAEEALRLADQTLRLVQTKVRTQSPGNGD
>NC_009523.1|WP_083763333.1|5128347_5130999_-|methyltransferase-domain-containing-protein
MTVSAPEIAFQETMPISPPTDDVVISVRNVGKMYRIYDHPQDRLKHMLLWRFGRHYGREFWALRNVSFEVRRGEMVGIIGRNGSGKSTLLQIIAGTLAPTEGEVQVKGRVAALLELGSGFNPEFTGRENVYLNGAILGLSREEIDARFDDIAAFADIGEFIDQPVKFYSSGMVVRLAFAVQVHVSPDILIVDEALAVGDIAFQSRCLDKIKQLTDCGVTIVFVTHDIGTFQNLCTYGYLLHHGMLFSSGRPAQVAMQYYELMRESEHARQRLMASPGDAEEVQHELRRREEEIKRKTGAGEYRFGTGAARIVDYCVLDTEGRETASLFVGKPFRVVTTIEFYDHVENIAIGIMFRNAQGQNLMGMHSYIEHRVNFGPHDAGERLEIGCEQIMLLNPGDYLLNIGIADFRSDYDFTNLDSRNNLMKVTVAGKPLGYGLIHTRPLFWSGGRTPVQSWQSMAWKSWEEWTLERCEKYAPDARRILEIGGQGAELARFLAQRDRQLTTLNFPTGDICRPTPYVDSAFDLIVCKMTFEHLYDPFAAAAEITRLLAPGGILLLSTVWSWRYHTASGFDDYWRFSTAGLMQLFPRLTIVETGYDLDDRRKDCRFDGVPVDELGGWREHWYVYLVAKKPDISESLSDQVMPYRFPRHVLNYTLNDIKTIYESILADPVIQPVIDEIMSHTNESVRERGIASGATEERALPGDPQFVSTGYYRMMLGRYAFAGAMFCRGAEVLDAGSGLGWGAFLVSHFARRVTAFDREPELVAFCREIWRAQNILWSVGDMCDLSFLTDMRYDVVLGMEVIEHLSRDDGERYIAEAARVVRPGGVFIGTSYFPVSRDEALAAQANNPAHLHIFTSDEMLMLLRRYFSNAVIIGSWMFIAVR
>NC_009523.1|WP_011958770.1|5125244_5128343_-|glycosyltransferase
MAERAHPDDPAFRGTIYEACLRERYAFCLPFVHGRDVLDVPCGTGWGSSLLSGYVSLTGLDIDHDAIDYARKHYAGIRFIEGSMCQLPFEDASFDTVVCLEGLEHVYLSDAQRFLHEAHRVLREHGILVVTAPLLNNGRHSSNPYHLYEFVAAELKSLLSRYFIPIHWEIIQGGDGPEARFVGQRKAVINAGAFRMASSLMFDRVYDWVLSLTGERGVRFTAGGEESIIATSCAVLILEGIDRLQDVSSSLRNQWIAYLQSCQRPTDGLFVDPLLERFPIESAIHDQAYVLDQTTYLALQALDALGSAPIHPVSVQERWPNPQAFIAWMERLDWSNAWLQSNRVMFALAFLVHAVEQCNQREAASIYHAALDWLDATQDRETGVWGTRHGASLLNGMAAAYHFLPFYEYVCRPIQCINQLIDTTLALQQSDGLFGSGLGGGACEDLDAIVVLAVAARYSRYRAEEVKRAAIRAFWALWNAQNEDGGFGYAIRSDDQVYRFSSWGAAESRVCSSDVWSSLARLVALGTIRHWFPDDTPSLPLWRFRRWPALGYHRSTDRLDDNERARLKIWMRPLPAPERHTGTEPGVSVIIPCYNLGRYLYEALASALQQTLQPLEVIVVDDGSTDDYTRLVLDTIDHPQVRVIRQENCGLPAARNAGIRMARSPFICCLDADDRLLPTYFERVLPLLESDPQVGFVTGHYREFDGRSGVVAPSTCALPDMLVVNRAIVTSLFRREAWERAGGYCEELSGMHDWDLWIGILEAGYRAEVVPEILFEYRVRPGSMYATTSQPENYARLVGQIVERHASLYQHWWRDVVVLYAREHASLAAYAEGQGRLSSQIRSNSAQQAANWKRAAEERAAWMAELEAARDYHAQQAANWKRAAEERAAWMAELEAARDYHAQQAANWKRLAEERAAWMAELEAARDYHAQQAANWKHVAEERAAWMAELEAARDYHAQQAVNWKRAAEERAAWMAELEAARDYHAQQAANWKHVAEERGAWIAELERGYIRVPRSRAVWRRLMQRKRVRST
>NC_009523.1|WP_083763332.1|5124237_5125287_-|glycosyltransferase-family-2-protein
MAPVDATQTSKIHMTRVSIVIPCYNLGEYLQEALDSALQQTHADLEVILVDDGSTDPATIRTIDQLAPHPQLRVFRTPNQGVARARNYGISLATGAYVLPLDADDRILPEYVARAAAILDANPGVAFVGCHYRTFGLRQSEYRPAAYRLPDMLVENVAPVTSLFRRCVWEEVGGYCPELNSIEDWDLWIGMLERGYRGEVVPDILFEYRVRSNSNLSQIRQPELYQKRLQLLYARHAGLYEQYRAEVLALKDLLFAHQLAYTHWLEEQRCAWEQVAQERLEMITRYDRNWAVREQRRQWWRYQIGRVQRVLAQHPDPIHRMQALTKGGLRVLRRKLSPYLQRVSWRKVL
>NC_009523.1|WP_011958768.1|5123449_5124199_-|class-I-SAM-dependent-methyltransferase
MFLITRNGVDSRRLTQNAEHFDAIAGSVYDESIPEHIMRHLTRRRVNLVRRVLPAGGVLDVGCGTGRFLSALPSDVYQRFGIDVSPGMIRTAYHRDASLRCCVASGTALPYADESFDVVFCAAVLHHIADPVAVKQTIVEIIRVLRRGGFAVIWDHNPLNPYWPLLMRRVPQDTGDERLIPRREIAAALSDISGMYPLNVRWRCMTFIPDFAPEWGLPVWRWMEQILEQIPLIRNLAAHNVALVYRLPT
>NC_009523.1|WP_011958767.1|5122660_5123434_-|glycosyltransferase-family-2-protein
MWEGKTVSVILPTYNEKDSIRKCVEDFFATGFVDEVVVVNNNAVPGTAEEVMNTKARQVFEKRQGYGYAIQRGLEESRGDILVICEPDGTFRPKDILRFLSYADEFDVVLGTRTTRELIGERANMGFFLRWGNWAVAKMIMLLFNTTSLSDVGCTFRLLHRHVYQQIRPYFSVGTSHFGVEMMLIIFMQKFRTIEISVNYLERVGVSSVTGDIKKAVVLGVTMIAFTLRFYLLHVILRREIPKSVELDTSHDPYIGS
>NC_009523.1|WP_011958766.1|5120770_5122636_-|hypothetical-protein
MNSVLEESYVKQRSYAWLVSSLLFFLASMLMIFFAVPSLGKPYIMDEMEYPSVAQAILETGKPVYYRGELTPENIGLWHPPLYIAWYAFWFNIFGSSVQSARFFGAFNAIILFFIMFVFTLRRWEFQRNSSPFFVWPLALFLAIVAAATSPLFVQGSTLPDIDTQVLPLVLVGFLLFVFEMRRTRHFDWVYLVFLVFGVVIQIYAKISTLLLLIPTLIVFEIMNVIGEKRLFNFRFRRLKRMNGHLFAFLFLVNSGWYSVLLRVLWVIVAIFVSFTLFVASWFVIANIWGVDYRNPFFYLSYSSNNPLNFAGSSGLGSVVFTIISDMRSHFSYAVTWIGIPVLLFVFIVTVIELRNSQKGLFCRSERFALLVFFTSLLLLYLILRPAPFVFPKYWPPLIPVISLLIADFLMSFDNRRRFFVVLLLLFVGTIVHQVYIQINPVTSGRDFILTLYTEWPKEPLVYQWQILPLIVALIVSVIVALFMKDDILGFLAVGALVVVLGWQINVVTHQMRVSYSTTYMYGEQSIDDVTDYLRRSLPDGAIVIAPKDVGYRLQDRWRYIELYADPRPYLDRPGVQVLVMRTNDYYGNTIRDTPEIASEVASRFDLDATIGSFSVFLRKP
>NC_009523.1|WP_085979421.1|5119548_5120606_+|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_157041180.1|5117006_5119466_-|hypothetical-protein
MIATALLSGVLVFILPRLAQELQVCDPSLRHIIIGLIAGGMVVVFFSTPAPAPHTLTWHWDAGQQAGAPAPVFSGASWDGVNRSVIELHATDDSNATLYGVWRAEAALDEIAGMRPARVELWLTQPSWAVIDPATGNPGPNVDGVDVTISVQREQETLLERHIALDPPAIPEQRAWHNVVLNLPPDSERLVVDVQTRKTFDSDRVWVTEAVVRPAWNSMLDRVALALIVVFAVSTLAFAGRLPQIVSASRRVSVFFSNYGYLLVGVACLWLGYLLVWQRGLYVDDYSLKNLAVDLITGDRRPIFDWKSNPNFPARLLTWIVLPQIAALVPDHELIVRILMALITGINAFLLGFLVYKMTTSWIGGTIAGWGFLVHPHNEVPFWIGTGGYLLATMFIMISLIALWLSLEQSSHPYLWIAISVISLLSSYMFSENGGYILILLPIFVLIAILRQSAYLCAVKRAIVVFMGFVVITVFYVTFVASSSAVVQNRGGLDINPGRILQRVIGYIPSIYWIFITFGLYGEAFSLGITEISNSWFATLALGCIVGLVFLSILTWKSKQYHDRNIVIPAIILVLLGVVWTLSSLSLPYALAPNQVYERRFFYQPTAGVATTLSGVTVLLISMIRKRFLEQVVVAGGALTLLLASICTLGFARTYAERNRLDELQLETLRRTAPSEMLPLGTFIVPYLSDERLFGRNDGLSMYVFGVMETPWSAYQALRMIYKRNDLMPLVANRWAPMRFSVDLEADPDHRLRIQGRPVPVNNLLMYQYRDGKVYIITRVTLQTLSGKHYVFDLPLAQKISEMGSPAIHDLVIRIDDTL
>NC_009523.1|WP_011958774.1|5133016_5133496_-|hypothetical-protein
MNVQIQTLKAEIAADLKAIAEIYDALTEYDTRLTGDERVIVLAYYLHNLYCAFESIFQRVASVFGNQIADRSGWHAGLLRRMTLDIDGVRPRLLSDQSYDCLDELRRFRHLFRSAYRMRLDAERLALAYRRARVLERIYRADIEQFLAFLDGLIRVEGE
>NC_009523.1|WP_011958775.1|5133434_5133869_-|nucleotidyltransferase-domain-containing-protein
MSGQFAFDLAASRAYLISRQQRAYQVAEQLRQAALHAVYRAARLVLPRFPGVERAYVFGSVLRSGAMHAGSDIDIALEGRLSAEEYFALWRALENELSEWTVDLVELDQEVRFADFVREQGALIYERSDSDVESRNCCRPEGDR
>NC_009523.1|WP_011958776.1|5133958_5135365_-|glycosyltransferase-family-4-protein
MRILLMTPFLTIGGADRLNLDVVRQLTGRRFRFSVVATLPHAHEWRPLFESITPDVVTLHPMIAPEQQPAFVRDLIRSRDIQALLISNSQFGYVLLPYLRRHCPDVVVLDLLHAVEPHWLDGGYPQLSLQQRAWIDLSITVSGDLHDWMIARGGDPERIVVSPAAIDVNVWNPAHFDRATIRQASGMPLDLPLILSVGRLAPEKRPRLAMRILRDVAQRGVPFSALIIGEGPERPVLERMLHDPVLRNVRLTGALPPERVREALAAADLLLLPSAREGIAIVLYEAMAMGVVPVAADVGGQRELVTPDCGILVPPSGDETTAYAAAIIGLLTDPTQRAAMGARARQRIVDHFRLDLMGDRMEAFMRHAVEHSARAGRTIPTPEEAERSAIEAIQLARQARNVARLWETGGYAGDIDLSPARRAALRIVRSARKHLRPWYRRLAAHDDSRLRRGVLTVRDWVVRWVYRA
>NC_009523.1|WP_157041181.1|5135552_5135690_-|hypothetical-protein
MKSKFLNWRMFLLLSIMAGISGAASLSPLTAFASGSVVHVVPYGL
>NC_009523.1|WP_085979421.1|5135874_5136932_+|IS5-like-element-ISRfsp3-family-transposase
MCKYRSIIENPEKLRSMTGLTVEEFHALVPIFHAAFEAYMKRRTIDGRVRYCRRYVSYANSPLPTTEDKLLFILTYLKQNPTQVMHGHLFQMSQSNVSKWVHLLHGALNYALSQQNLLPARTADDLARRLQEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSCEEPSHATKAPPFFIHDGVERPIRRPSDKVDRELYYSGKKKRHTLKNVLIIDEFGSIHFLSDTYEGRVHDKCIADEAGYTLPNASILYQDAGFQGFTLPGVQIMQPKKKPRNGTLTPQEKEENRRISSVRVRIEHVIGDIKRYRIIHDIIRFSCSEFRDMVMETCCGLHNFRIWLKRKKQSKNQNES
>NC_009523.1|WP_011958777.1|5137048_5137900_-|ABC-transporter-permease
MAVLVSTRTEGIFALLNPLHLARTLWRHRDLIVQLTRREIEGRYRGAYLGILWLLAHPLLMLTVYTLVFGVIFQSRWPQARSDSLADFALILFAGLSAYSCFSETVSRAAGSIVSVPNYVKKVIFPLEVLPVSILGAALFHMLVSIGVLLVAHLALGGGMPWTVILLPLVSLPLIFLALGIAWFVASLGVYIRDVGQAIGIVLQVMFFLTPIFYSIEIIPEPFRTLVLLNPMAPVTENFRRVLLWGQLPSFPGTLWWILGTGVVMMLGYAWFMKTRKGFADVL
>NC_009523.1|WP_011958778.1|5138238_5138820_-|dTDP-4-dehydrorhamnose-3,5-epimerase
MQFTLHTTPLPGAIIIEPACFRDERGFFLESWNRRDFAAHGITIDFVQDNHSRSVKHVLRGFHYQDMTAPMVKLVRCTLGSVLDVIVDLRVGSPTFGRWHAVELTAENMLQLLVPVGFGHAFLTLSDVAEIQYKCSAYYTPSAEGVITWNDPDIGVDWPVTEPILSQRDRRGMRLAEYLERPAFRFEEGNVGR
>NC_009523.1|WP_011958779.1|5138890_5139298_-|DUF86-domain-containing-protein
MARDVLLRKLAYLRRLLRDLAPFAQMSRDEIEKQHYTVERILELLVGAAADLTFHILAERGLTPTSDRESFRLAAQEGLLPGDLAERLQQAAGMRNILVHLYETIDYAVLHASIAPALHDFALFVAVAEQWETSE
>NC_009523.1|WP_157041182.1|5139287_5139626_-|nucleotidyltransferase-domain-containing-protein
MAHARGQARPNSDYDLALKPGHPPAPLDRVAWQVEIENLLGADVSLVLLTPTTDPVLGWEIARDGKLLYERDRGLWMSERARLWHLYNDALPFRRALAESLRSYAEEVRHGA
>NC_009523.1|WP_011958781.1|5139871_5140849_-|NAD-dependent-epimerase/dehydratase-family-protein
MAQRSILITGGAGFIGSHLADALIERGDRVAIIDDLSTGAVANIRHLKGHPNFSYTLDTIANEAVLAELIDESDAVVHLAAAVGVQLIVQSPVRTIETNVNGTELVLRWAAKKGKTVLIASTSEVYGKSERAPFREDDDLVLGPSTINRWSYACSKLLDEFLALAYHKERDLPVIIARLFNTVGPRQTGRYGMVVPRFVRAALRNVPLRVYGDGQQTRCFCYVGDTVRALIALLDHPDAVGKVFNVGNPQEVSILELAQRVVRLAQSSSPIVLVPYEHAYEAGFEDMRRRVPDISRLTALTGFRPTLDLDDIIRTVIEYEQAHGA

Crispr_ID: NC_009523_96

• CRISPR_ID: NC_009523_96
• CRISPR_location: 5199226-5199318
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_96

Consensus_repeat	Method
GCCTGTGGTCGTGGAGTCGGTGTC	CRISPRCasFinder

spacers of NC_009523_96

>96.1|5199250|45|NC_009523|CRISPRCasFinder
CGTCGGGGGCGCGGGGTTGGCGTTGCGCGGGGGCGCGTTGGCGTA

CRISPR arrays and Neighbor proteins around NC_009523_96

CRISPR arrays

The CRISPR arrays of NC_009523_96

>merge|NC_009523|96|5199226-5199318|CRISPRCasFinder
GCCTGTGGTCGTGGAGTCGGTGTCCGTCGGGGGCGCGGGGTTGGCGTTGCGCGGGGGCGCGTTGGCGTAGCCTGTGGTCGTGGAGTCGGCGTC

>NC_009523|96|92|5199226-5199318|CRISPRCasFinder
GCCTGTGGTCGTGGAGTCGGTGTC	CGTCGGGGGCGCGGGGTTGGCGTTGCGCGGGGGCGCGTTGGCGTA
GCCTGTGGTCGTGGAGTCGGCGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157041408.1|5198177_5199173_-|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl|CDD|273374
NC_009523.1|WP_157041185.1|5208137_5208476_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958829.1|5194342_5195203_-|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224042
NC_009523.1|WP_011958825.1|5189722_5190967_+|hypothetical-protein	unknown	unknown	gnl|CDD|378784
NC_009523.1|WP_049767619.1|5200108_5200753_-|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NC_009523.1|WP_011958841.1|5208596_5210147_+|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|236901
NC_009523.1|WP_011958832.1|5197085_5198081_-|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl|CDD|223646
NC_009523.1|WP_041335990.1|5192958_5193525_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041334267.1|5191760_5192900_+|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173847
NC_009523.1|WP_011958839.1|5206370_5208041_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011958842.1|5210115_5210931_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011958837.1|5202893_5203853_-|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl|CDD|223646
NC_009523.1|WP_041334277.1|5210976_5211918_+|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl|CDD|163676
NC_009523.1|WP_011958826.1|5191277_5191523_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958836.1|5201622_5202897_-|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl|CDD|223654
NC_009523.1|WP_011958835.1|5200804_5201623_-|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224042
NC_009523.1|WP_011958824.1|5188980_5189565_+|cytochrome-c	unknown	unknown	gnl|CDD|379187
NC_009523.1|WP_157041405.1|5196066_5196900_-|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl|CDD|273373
NC_009523.1|WP_011958830.1|5195223_5196027_-|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224042
NC_009523.1|WP_011958838.1|5204060_5206061_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270372

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_157041408.1|5198177_5199173_-|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl|CDD|273374	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88., phosphate ABC transporter, phosphate-binding protein. This family represents one type of (periplasmic, in Gram-negative bacteria) phosphate-binding protein found in phosphate ABC (ATP-binding cassette) transporters. This protein is accompanied, generally in the same operon, by an ATP binding protein and (usually) two permease proteins. [Transport and binding proteins, Anions].	1.1573e-118
NC_009523.1|WP_011958829.1|5194342_5195203_-|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	1.13e-173
NC_009523.1|WP_011958825.1|5189722_5190967_+|hypothetical-protein	gnl|CDD|378784	pfam11992, DUF3488, Domain of unknown function (DUF3488). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 323 to 339 amino acids in length. This domain is found associated with pfam01841. This domain has a conserved PLW sequence motif. This domain contains 6 transmembrane helices.	0.000765875
NC_009523.1|WP_049767619.1|5200108_5200753_-|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	1.35523e-39
NC_009523.1|WP_011958841.1|5208596_5210147_+|PAS-domain-containing-protein	gnl|CDD|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	3.10307e-80
NC_009523.1|WP_011958832.1|5197085_5198081_-|phosphate-ABC-transporter-permease-subunit-PstC	gnl|CDD|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	4.98258e-87
NC_009523.1|WP_041334267.1|5191760_5192900_+|acyl-CoA-dehydrogenase	gnl|CDD|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
NC_009523.1|WP_011958842.1|5210115_5210931_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.1925e-52
NC_009523.1|WP_011958837.1|5202893_5203853_-|phosphate-ABC-transporter-permease-subunit-PstC	gnl|CDD|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	2.39693e-84
NC_009523.1|WP_041334277.1|5210976_5211918_+|hydroxymethylglutaryl-CoA-lyase	gnl|CDD|163676	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	1.09917e-150
NC_009523.1|WP_011958839.1|5206370_5208041_+|HAMP-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	6.02199e-38
NC_009523.1|WP_011958836.1|5201622_5202897_-|phosphate-ABC-transporter-permease-PstA	gnl|CDD|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	7.4442e-86
NC_009523.1|WP_011958835.1|5200804_5201623_-|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	5.80298e-180
NC_009523.1|WP_011958824.1|5188980_5189565_+|cytochrome-c	gnl|CDD|379187	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III.	2.09475e-10
NC_009523.1|WP_157041405.1|5196066_5196900_-|phosphate-ABC-transporter-permease-PstA	gnl|CDD|273373	TIGR00974, 3a0107s02c, phosphate ABC transporter, permease protein PstA. This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions].	1.75709e-69
NC_009523.1|WP_011958830.1|5195223_5196027_-|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	1.16749e-148
NC_009523.1|WP_011958838.1|5204060_5206061_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	gnl|CDD|270372	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.09384e-104

Protein sequences

>NC_009523.1|WP_157041408.1|5198177_5199173_-|phosphate-ABC-transporter-substrate-binding-protein-PstS
MSGVVLQGSGATFPNPLYQAWISVYKNVVPGVTISYQAVGSGQGQRDFIRYLTDFGGTDSALPADRIAAEAPDALHVPMVIGAVVPTYNLPGLPAGTVLRFSPETLSGIYLGEITRWNDPRIAADNPGVALPDLPITVVYRSDSSGTTSIWTDYLSKVSETWRTRVGAGTTVRWPAGIGAPGNAGVAGTVVRTEGAIGYVEQAFAIGNRLPVPAVKNAAGNYVLPTPETVSAAAAGVTIPEDLRFSITNPQGANSYPIAGLTWILIRSQTYTDVPKAQALTDFLYWCLTEGQGAAIRLGYVQLPTEVRLKAMAQLNKVRVRGEQVFTTPPR
>NC_009523.1|WP_011958832.1|5197085_5198081_-|phosphate-ABC-transporter-permease-subunit-PstC
MAQAQAARETFRERIAKRTQHGDGIFWGLTLFFALLVIALVFAILWVTWSDSQLARERFGLAFFTSGEWNPVETEVNPVSFGAMPAIVGTLISSAIALILAAPVAIGIGIFLAELCPPAIRTPLSFMVELLAAIPSVIYGVWGVMVFAPFFTQNIARPMSETIGQIVPWLGGNVASGRGLLIAGIILSIMILPTIAAITRDVLTLVPNTQREVMLALGATRWEVIWLSVVPYARAGIIGAVMLGLGRALGETMAATMLVGNRPQVPETLFEPATTAAALVASELVNSQTLIHESALVLIALALFAITLLLNLSARLLIWYMNRGPVGRTRA
>NC_009523.1|WP_157041405.1|5196066_5196900_-|phosphate-ABC-transporter-permease-PstA
MQVSMPDLGPIDPNDPFANLDLGSLVGGEPGTGQEGANDEKGADILEAPARGGVFHGIVGTLLITTVALIIATPIGIMAGIFLSEFPDNSVATTVRFASDVLSGAPSIIVGVTAYILIVNAKGADGQPLGFAGIAGSIALTFLMVPTITRTTEEVLKLVPEATREAALAMGATTWYSTFTVVIPTALSGIVTGVMLAFARGAGETAPLIMTVLGSNVLMTNLFEPMAALPLITYRYTESPFPSENTLAWGSAFVLMMLVLLVNILVRIATRNRLRMR
>NC_009523.1|WP_011958830.1|5195223_5196027_-|phosphate-ABC-transporter-ATP-binding-protein
MTIPVMTSQSTIQIRDLKPYYGKRLAVRPVTMTIKPNKITAIIGPSGCGKSTVLRCLNRMHETILGARAEGQVLLNDENIYAPDVDPILVRRKIGMVFQQPIALRTRSIFENVAIGLRLAGINDKRVLAEKVEASLRAAVLWDEVKDKLNQAGTALSGGQQQRLSIARTIAVEPEVILFDEPCSALDPISTMKIEDLLLDLRKKYTIVIVTHNMQQAARISDETAVFMVDTDDGVPTGVLVEYNPTSKVFTQPDDPRTEDYISGRVG
>NC_009523.1|WP_011958829.1|5194342_5195203_-|phosphate-ABC-transporter-ATP-binding-protein
MDETVRQTGLSGRFAETVARAKEHTTSTTQETKIEAINFNFFYGTFQALRNINIRIPQNQVTAIIGPSGCGKSTFLRAINRMHDRTPGARGEGQLILDGLNIYGDLDPVKLRRRVGMVFQRPNPFVKSIYENVAYGLRVQGVRDRRVLDEKVEMALRRAALWDEVKDRLHKSSGTALSGGQQQRLCIARAIAVEPEVVLMDEPCSALDPIATMKIEDLIHELSRNFTIVIVTHNMQQAMRVSDMTAFMLMDRETRAGELVEFGPTDAIFTNPKDKRTEDYVTGRFG
>NC_009523.1|WP_041335990.1|5192958_5193525_+|hypothetical-protein
MACLLSLQLMGLASVDPPQGARWAEARARWSARAPDSYYIAVRIEALGRVCAQRLEVRGGWVRRVLENTCDTLWVDPLTVDQLFALSSDIESIPASRCVPSPHDCPCQRVFTLRRVEYDAEYGFPSAIIARSEVQFHPMRRDFWEYLWTEGNLPACQPARRRFTVQVLALTPLPPESPVQTAEFKQVQ
>NC_009523.1|WP_041334267.1|5191760_5192900_+|acyl-CoA-dehydrogenase
MDFALSDQHEMLRQTVRAFAEQEIRPTAAARDEAMEFPVDLVKKMGQLGLMGVAVSEQYGGAGLDYISYAIVIEELSRVDASLGVIASVNNSLVCYGIETFGTEEQKRELLTPLASGRMLGAFSLSEPGAGSDAAAQKTTAVRDGDEYVINGIKNWVTNGDYADTIILMAMTDPSRGHRGITAFLVDPHAPGCSIVKVEHKLGIRSAHSCQMAYDNYRVPAWRRLGEEGQGFKIAMTILNAGRIGIAAQAVGIAQGAYEAALEYAKIREQFGKPIIENQAIGFTLADMATRIKAARLLTYEAAWRKDQHLDFVSAASMAKLYASETAMWTATKAVQVFGSNGYSKEYPVERYFRDAKITEIYEGTSEIQRLVIAREIAR
>NC_009523.1|WP_011958826.1|5191277_5191523_-|hypothetical-protein
MQPRNYEEQTINEVAGRVPEARHVLRAYHISASNTMPLDIAAAEASVTPDELLAVVEYRARRRARQAPAVREYATEEELVA
>NC_009523.1|WP_011958825.1|5189722_5190967_+|hypothetical-protein
MIAQEPAALRPALGRFQQVALIVGSVAMLLAVAGAFLGAAQFFHSYIFAYFFWFALSLGGLLVLMINHLTQGVWGLMLRRLLEAAAMTLPLMAILFLPIAIETLTGTHYLFPWTNPEVVANDEVVALKTPYLNVPFFLARAVIYFVLFVGMAYLLRQWSLEEDAKGFSEDLRGRFQRLSGPGIVVLVLAWTLAATDWGMSLEPEWFSSMYPVTYIASMLILTFGGGIIALAALKARNLLPFGIPTDRLHDLGKFLFAFVAVWAYVNFSEYLIIWSGNVPELTPWHGHRSAGGWEILGIAMIFGHFLLPFMLLLSRFAKRRIANLTAIAAYMFVIEIVWYFWKIMPAFHPDGFHIHWLDLVTLIAIGGLWLGTFAWHLQRAPLLAPNDYRVPLLRRQEAGGHGHGHHGKAAVEHH
>NC_009523.1|WP_011958824.1|5188980_5189565_+|cytochrome-c
MLNERQCRRQSAWFGRILRAGWLIAAALLMTACHLEMYDQAKFNPQQAANDLFADGAAARPLVEHTVARGRLRIDATSTGRVAGDPNGAYLTTIPIQVSPELLARGAERYRIYCAVCHGANGNGRGQVGLLLNPRPPSFYDQRLLEMPDGEYYDVIVNGRGTMYAYGYRIQSISDRWAIVAHIRELQKNPPQQN
>NC_009523.1|WP_049767619.1|5200108_5200753_-|phosphate-signaling-complex-protein-PhoU
MKHDYDRLRHALDGMAQRVKEAMHEALQALRRFDAIGASQIIHDDPDINALQQDIEDLTARFISRWQPLLRDLRRVLTLLMVAGELERIGDYAKQIALQVRRAREAGYTPLLTTDLQELGALTEHILTASIAAFLSEDATTARAIATLDDQVDARRRAILEAVRQMALNDAALFDAALASLEITRALERVADRATNIAERTVYLATAAHESLNA
>NC_009523.1|WP_011958835.1|5200804_5201623_-|phosphate-ABC-transporter-ATP-binding-protein
MATAEFSSVNTLQSNGKYAVELKNTHIYYGAFRAVNNVSLQIERQRITAFIGPSGCGKSTVLRAINRMNDLIPGSRLEGQILFHGKNIYDPDVDPVEVRRRIGMVFQKPNPFPKSIYENIMFGPRINGWRGTKQQADELVERALRGAAIWDEVKDKLHQPGTALSGGQQQRLCIARALAVQPEVILMDEPCSALDPISTLKIEELMFELRQNYTIVIVTHNMQQAARVSDYTAFFLMNESRAGELIEYGPTTQIFQNPHDERTENYISGRFG
>NC_009523.1|WP_011958836.1|5201622_5202897_-|phosphate-ABC-transporter-permease-PstA
MSAQSMDQRDRPTGYLPEGADINRNIAARRLRGAIWQAIFVSSLIIGLLALATLIYTIVDETFGYIAVQTKIDPEELEELTDGRPLEELSKEELIEILRANVSAGLFRRFDRDEPFSERSKESVLQLVEERVVGREVVAAYKLTESLLERERIEATVRERFPRAKLEFHSWINREFLTRPMSSVPLLAGVGNAILGSLWVIAITMLLAIPIGILGGVYLEEYASDTWYYRLIETNINNLAGVPSIIYGILGLAVFVRALEALTSGAMFGVTDSNGRTILSAGLTMALLVLPLMIINAREAIRAVPQSLRQASYGLGATKWQTVWHHVLPNALPGILTGTILSVSRAMGETAPLIVIGASTFVVFFPDSVFDKFTVIPIQIYNWTSQPGAQFRSIAAAAIIVLLVTLLALNATAILLRNRLRRNY
>NC_009523.1|WP_011958837.1|5202893_5203853_-|phosphate-ABC-transporter-permease-subunit-PstC
MEQEARVAVERSTPLSISPINLRGKPRFGENVIEIIVFICGAISIFTTTAIVIVLFQEAWMFFGSPEVDLVEFFGTTTWQPETGRFGIWPLMTSTLITSIIALMVAVPLGLGAAIYLSEYASPQARGYLKPILEVLAGVPTVVYGYFALTFVTPVILQGLLGKGNVEIYNMLSAGLTMGIMILPLVASMSEDALSAVPRALREGAYGLGATRLETSLRIVVPAALSGILAAVIVAMSRAVGETMIVALAAGAGPRFTFNPLQAAETMTGHIARISGGDISYASIQYTSIFAIALVLFFMTLLLNLLSGWVVSRFREVYE
>NC_009523.1|WP_011958838.1|5204060_5206061_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein
MHIIRKRFFASLLMLALIAPIIAACGGQTAQPTAAPAQPTAAPAEATPAPGQPTAAPAQPTAAPTQPTAEPAAEIDYDGLPDVDPGAVTGNIVTAGSSTVFPLTQRMAERFKDEGYTGNITIDSIGTGAGFERFCKAGETDISNASRPIKAAEVENCRAIGREPVEFRVGTDALAVVVNPANTFVDSLTKAQLADIFSGKAKTWKDVNPDWPANPIKLFSPGSDSGTFDFFVEVVMDPAFEKKGKEAILNAPGIQLSENDNVLVQGVEGDPNAIGYFGYAYFVPEKDRLKAVKVEGVEPTEKTAETGEYPLARPLFIYSDAKIMKEKPQVAAFINFYLTFVNDEVLDVGYFPASQQAINVAKANWLAAMGMEVKMPEVDPGAVTGNIVTAGSSTVFPLTQRMAERFKDEGYTGNITIDSIGTGAGFERFCKAGETDISNASRPIKAAEVENCRAIGREPVEFRVGTDALAVVVNPANTFVDSLTKAQLADIFSGKAKTWKDVNPDWPANPIKLFSPGTDSGTFDFFVEVVMDPAFEKKGKEAILNAPGIQLSENDNVLVQGVEGDPNAIGYFGYAYFIAEKDRLKAVKVEGVEPNDQTAESGQYPLARPLFIYSDAKIMKEKPQVAAFINFYLTFVNDEVLDVGYFPASQQAINVAKLNWLAAMKP
>NC_009523.1|WP_011958839.1|5206370_5208041_+|HAMP-domain-containing-protein
MNITSASRHSSRSLSLLLALALISLSVLSLSISNALQVASNWRVHQRALAAQQQSLAHGVAVETQTFLDARWNMLNTAIRMSNLATAPVAHRIEALQRLLALDPSFEQLTILDDRRFVVAAVSQNRQRTPNFLDTALVEEIMHQTTLRNRYVSSLRIDGATGEPGIILALPLVDSFENDQGALIATVNARFLWDALKRQLPFREGIAYIVNRDGDLLACTDTARVLRGDTAVDIPVVQAAFAHDRSGSFQTLHYTGLTGIEVVGSYEALREPAWAVVVEVPRTVAYRDIVNDIGVSALILLSAAVVSGGIGVYLARWLSAPLHRLTRLAERIAAGERDLRVAVRGPREVEILARAFDTMTTQLEQNLETLEHRVAERTADLQAALARVEAQAQEQARLLEEIAQQRQAIRELSVPVLPVTDQALVMPLVGAIDTERLADIQDRALHALQRSHARYLLVDITGVPVVDSQVAQGLLAINAMCRLLGAEMVLIGIRPEVAQTIVGLGMNLSSLRTAADLQTILGEITRRDQGRATRNGAANGGIAQNHAFFDLFSSRD
>NC_009523.1|WP_157041185.1|5208137_5208476_+|hypothetical-protein
MPAKGSRASAAPRGAIGRIRGSAGVAEEALRGRTERIKRLTPPPPPPSPTFERLLTIGGLPFLLVRLFWYNLREVRFWWPLVLPLLAWTAWRTYHRERAKSVQHDRTAQSRA
>NC_009523.1|WP_011958841.1|5208596_5210147_+|PAS-domain-containing-protein
MGASVQLAIQNNLNASIRDIALNLCAATGAKACYLTLRERPGAYPRFIGAAGVHGDPPDWNDIGGAHILRQIGYGGTMVMPDCMTSAMALSLSSGGRDVGVAILLFDGEPPSVSDTMVAAARLAAQAIDASWQLAMLHDQAEQIAERTRLREIQLSRNLIRGVIDSVPMGLVLIDPTGYVLAANRALAGRFGLEPAMLVGRFYDDVLGAWSESAASRTFVERQPQRLRRTLQRPGSSDALIEIASFPLFDAAGAVYQVVEVWEDITERVALQTQLVRAEKLAAIGHLAASIAHEVGNPLQAIQGFLALFLEQCAPETPNQHFLRLAEEEIERIVRVLERLRDLYRPRADVFTNVDVNELIESVLLLTGKQLERSRIRVVRELTPNLPTIQGVADQLKQVLLNLVLNAAEAMPNGGILHVQTHRAHLASGQEAIAIAITDTGVGIPPEQLTRIFDGLHTTKERGMGLGLYTSKAIVERHLGSISVQSIPGEGTTFEIMVPIRHKESRHEATGENPGR
>NC_009523.1|WP_011958842.1|5210115_5210931_+|response-regulator-transcription-factor
MKQPAKILVVDDERSVRIMLETALRAHGYRVETAENGATARMRLGGEEFDLLLLDLQLGDVDGIEILREVKEQSPATEVILLTAHGSINSAIAALRYGAFDYLLKPAQITEIRERVERALHHRRVNLQRTELLQRISESARALGLIEGGGNPVPAPTASNDYLTVGPLVLDLRRHAAYLGEHTLTLTRTEFALLTALAQNPDTALSYTTLSEAVYGRAQAEEEARSLLRPHIARLRQKLDATRTPGIALVSIRSMGYMLQTEDAPAPGSAL
>NC_009523.1|WP_041334277.1|5210976_5211918_+|hydroxymethylglutaryl-CoA-lyase
MNALPRFPDHVSIREVGPRDGLQNEDVILTTTQKVQLIDRLADTGLTLIEVGAFVRPANVPQMADTADVFAAISRRPGVVYSAIVPNAIGARRAVAAQADALQVFLSASESHNRSNVNMSIEQSLAQAADIAAIAREAGVCFEAVVSVAFGCPFEGDVPLDRVMDLTARLFDLGAEQVTFGDTTGMGHPALVRDLVLAFYERFPQAHPRLHLHSARGAGLANVLMALSLGVDRFDASVGGIGGCPFAPGAPGNICTEDLVHMLHEMGISTGIRLPALLDVARMLEGMLGRTVPGQTIKAGICKHLPPDGAPRR

Crispr_ID: NC_009523_97

• CRISPR_ID: NC_009523_97
• CRISPR_location: 5222778-5222881
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_97

Consensus_repeat	Method
GCTCCTTATCTCCGCGTCTCCGCGTGAGCCGGTTC	CRISPRCasFinder

spacers of NC_009523_97

>97.1|5222813|34|NC_009523|CRISPRCasFinder
AATGCATGCGGCCAACAGACCTTATGAGCATGGC

CRISPR arrays and Neighbor proteins around NC_009523_97

CRISPR arrays

The CRISPR arrays of NC_009523_97

>merge|NC_009523|97|5222778-5222881|CRISPRCasFinder
GCTCCTTATCTCCGCGTCTCCGCGTGAGCCGGTTCAATGCATGCGGCCAACAGACCTTATGAGCATGGCGCTCCTTATCTCCGCGTCTCGGCGTGAGCCGGTTC

>NC_009523|97|93|5222778-5222881|CRISPRCasFinder
GCTCCTTATCTCCGCGTCTCCGCGTGAGCCGGTTC	AATGCATGCGGCCAACAGACCTTATGAGCATGGC
GCTCCTTATCTCCGCGTCTCGGCGTGAGCCGGTTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157041186.1|5230711_5230999_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958856.1|5227578_5228799_-|CoA-transferase	unknown	unknown	gnl|CDD|367110
NC_009523.1|WP_011958850.1|5221350_5221899_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041334277.1|5210976_5211918_+|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl|CDD|163676
NC_009523.1|WP_011958851.1|5221895_5222612_+|sortase	unknown	unknown	gnl|CDD|320674
NC_009523.1|WP_011958844.1|5212421_5213891_+|DNRLRE-domain-containing-protein	unknown	unknown	gnl|CDD|187676
NC_009523.1|WP_011958854.1|5224964_5226008_-|CoA-ester-lyase	unknown	unknown	gnl|CDD|225184
NC_009523.1|WP_011958859.1|5232556_5233045_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041410.1|5228835_5230200_-|CoA-transferase	unknown	unknown	gnl|CDD|367110
NC_009523.1|WP_011958846.1|5215328_5216900_-|malate-synthase-A	unknown	unknown	gnl|CDD|236432
NC_009523.1|WP_011958849.1|5220373_5221354_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009523.1|WP_011958847.1|5217210_5218434_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl|CDD|99740
NC_009523.1|WP_011958842.1|5210115_5210931_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011958848.1|5218430_5220377_+|polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|224011
NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein	unknown	unknown	gnl|CDD|223325
NC_009523.1|WP_011958853.1|5223887_5224949_-|MaoC-family-dehydratase	unknown	unknown	gnl|CDD|239535
NC_009523.1|WP_011958845.1|5214020_5215307_-|isocitrate-lyase	unknown	unknown	gnl|CDD|237893
NC_009523.1|WP_011958852.1|5223105_5223756_+|flavodoxin	unknown	unknown	gnl|CDD|372273
NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein	unknown	unknown	gnl|CDD|226300
NC_009523.1|WP_011958855.1|5226017_5227244_-|2-methylfumaryl-CoA-isomerase	unknown	unknown	gnl|CDD|211976

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958856.1|5227578_5228799_-|CoA-transferase	gnl|CDD|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.60982e-138
NC_009523.1|WP_041334277.1|5210976_5211918_+|hydroxymethylglutaryl-CoA-lyase	gnl|CDD|163676	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	1.09917e-150
NC_009523.1|WP_011958851.1|5221895_5222612_+|sortase	gnl|CDD|320674	cd00004, Sortase, Sortase domain. Sortases are cysteine transpeptidases, mainly found in Gram-positive bacteria, which either anchor surface proteins to peptidoglycans of the bacterial cell wall envelope or link proteins together to form pili by working alone, or in concert with other enzymes. They do so by catalyzing a transpeptidation reaction in which the surface protein substrate is cleaved at a conserved cell wall sorting signal and covalently linked to peptidoglycan for display on the bacterial surface. Sortases are grouped into different classes based on sequence, membrane topology, genomic positioning, and cleavage site preference. The different classes are called class A to F sortases. Most Gram-positive bacteria contain more than one sortase and it is thought that the different sortases attach different surface protein classes. The typical eight-stranded beta-barrel fold is observed in all known sortases, along with the conserved catalytic triad consisting of cysteine, histidine and arginine residues. Some sortases contain an N-terminal signal peptide only and the C-terminus serves as a membrane anchor, which represents a type I membrane topology, with the N-terminal enzymatic portion projecting towards the bacterial surface and the C-terminal end residing in the cytoplasm. Other sortases adopt a type II membrane topology, with the N-terminal hydrophobic segment inside the cytoplasm and the C-terminal enzymatic portion located across the plasma membrane. The N-terminus either functions as both a signal peptide for secretion and a stop-transfer signal for membrane anchoring. Sortases are also present in some Gram-negative and Archaebacterial species, but the functions of these enzymes are unknown.	5.56887e-27
NC_009523.1|WP_011958844.1|5212421_5213891_+|DNRLRE-domain-containing-protein	gnl|CDD|187676	cd09618, CBM9_like_2, DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized subfamily are typically found at the N-terminus of longer proteins that lack additional annotation with domain footprints.	0.008
NC_009523.1|WP_011958854.1|5224964_5226008_-|CoA-ester-lyase	gnl|CDD|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	1.12275e-65
NC_009523.1|WP_157041410.1|5228835_5230200_-|CoA-transferase	gnl|CDD|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	6.50698e-136
NC_009523.1|WP_011958846.1|5215328_5216900_-|malate-synthase-A	gnl|CDD|236432	PRK09255, PRK09255, malate synthase; Validated.	0
NC_009523.1|WP_011958849.1|5220373_5221354_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.39882e-11
NC_009523.1|WP_011958847.1|5217210_5218434_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl|CDD|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	1.51938e-144
NC_009523.1|WP_011958842.1|5210115_5210931_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.1925e-52
NC_009523.1|WP_011958848.1|5218430_5220377_+|polysaccharide-biosynthesis-protein	gnl|CDD|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	2.60726e-29
NC_009523.1|WP_011958853.1|5223887_5224949_-|MaoC-family-dehydratase	gnl|CDD|239535	cd03451, FkbR2, FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.	5.8022e-58
NC_009523.1|WP_011958845.1|5214020_5215307_-|isocitrate-lyase	gnl|CDD|237893	PRK15063, PRK15063, isocitrate lyase; Provisional.	0
NC_009523.1|WP_011958852.1|5223105_5223756_+|flavodoxin	gnl|CDD|372273	pfam12724, Flavodoxin_5, Flavodoxin domain. This is a family of flavodoxins. Flavodoxins are electron transfer proteins that carry a molecule of non-covalently bound FMN.	6.16208e-38
NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein	gnl|CDD|226300	COG3777, COG3777, Uncharacterized conserved protein [Function unknown].	2.93506e-80
NC_009523.1|WP_011958855.1|5226017_5227244_-|2-methylfumaryl-CoA-isomerase	gnl|CDD|211976	TIGR04253, mesacon_CoA_iso, mesaconyl-CoA isomerase. Members of this protein family belong by homology to the family of CoA transferases. However, the characterized member from Chloroflexus aurantiacus appears to perform an intramolecular transfer, making it an isomerase. The enzyme converts mesaconyl-C1-CoA to mesaconyl-C4-CoA as part of the bicyclic 3-hydroxyproprionate pathway for carbon fixation.	0

Protein sequences

>NC_009523.1|WP_011958851.1|5221895_5222612_+|sortase
MKSGKISTLWHHPFVMVGLAIALILLGIGAAYMVWLNMLRDQERLNPSTERLLEVSDGQRIPLAQPDPTPVPTAQAIPVAATNPESTPAPSATPEVLPPERLIIPRINVDWPITPADVDHLPKFRGVGWIFGSAFPGMPGNMVLTGHAGGPYATLTRLHEVQPGDDILVQTETATHRYRVQTIYETTPDDVLAMAPSDKTIATLITCSGDWIPERQTNARRLIVVAAYEGMAREGAGG
>NC_009523.1|WP_011958850.1|5221350_5221899_+|hypothetical-protein
MKRISAVHVGLFLILCLLFSSAMAEDRPTTAPPSTEPLTVLADVEGLGHRITGAYVIRRATDGSGRVFWRFRGMLDGEFEEVDGEAFERWSLDGSVTVELTQFNYPDFTLDQLPARRITLMPGWDGLIVIAGVPLAVKGEFKAPTAGSSPVLVVTNAGRGARVITELPNTAGSPDREGAQQP
>NC_009523.1|WP_011958849.1|5220373_5221354_+|tetratricopeptide-repeat-protein
MMSDMMVNTPAPDNASVHLMRSECLPQGASLSIESLLTLAAASPAAAAELAQQCVNAVDAVQLSADPETAIELLMRVTDVCAGTLGETHPATGALRCRLGDLLLAERRLEQARQQYEIVLAAHRPSVFGDSDAIARALSGLGDVLRTERKYVTALICLQRALRRQSEAHGVHPATAQTHTRLGALWFEQQRYATARFHFQEALAIREATLGPRDPATAQSLHNLGVTLAALGDLRSARVCLAQALAIREDRLGRTHLATAQSLEALSRVLADLGDDESAQYCLERAAALYREHSGDRRPVSATVAVQVNRRQRGGARWMNLLRREP
>NC_009523.1|WP_011958848.1|5218430_5220377_+|polysaccharide-biosynthesis-protein
MMQRLQNRHFLLFDILLVPLAIYLSFVLRLEMFNLGSYWLVCMQFCLTAVVTTPLVFRALGIYRRYWRYASFEELLLLCSATSIALALATLVFTLIDALLPVVATMPRSIPFIVPPIAATLISVPRLLVRIGAARERRRRATDRPAPVLIMGAGDAASIIVREIQRNPKLGMEVVGLLDDDPAKRGLRLHGVEVMGDRHAIPTLVARHKVRQVIIAMPGAPGKAVREIMHICESVGVTVRIMPGVHELIDGTISVSKLRNIQIEDLLRRAPVQTDTAAVRALIANRRVLVTGGGGSIGSELCRQLIRCGPSHLIVLGHGENSVFEICNELQRLAEAHAGQSPHIVPVIADIRDLERLRAVFEMHAPELVFHAAAHKHVPLMEEHPVEAISNNVIGTRNLLDVSLETGVERFVMISSDKAVNPTSVMGATKRIAEMLVLNAARISGRPYVAVRFGNVLGSRGSVVLTFKRQIAAGGPVTVTHPEMRRYFMTIPEAVQLVLQASVLGRAGEIFMLDMGEPVKVVDLARDMIRLSGLEVGRDIDICFTGIRPGEKLFEELFAHGEEYQPTAHSKIFIAAGASNNIPPDLRTDVALLEQVARANDDAAARRMLRHIVPEYCPPLPAPPIPVAENTPYPVLVRPLQPLIGGGR
>NC_009523.1|WP_011958847.1|5217210_5218434_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MAIRVPMASPDISDAEVQAVVETLRTPTLSIGPRLEAFERAAAAVAGVEWGIGVNSGTSGLHLCIIAAGVGDGDMVITTPFSFIASANCILYERGVPVFVDVDPATGNIDPHLVSSAVADLTRGGVSADRWLPPALRGIRRPAGRLRALLPVHAFGQPADMDPLLDTARNADLVVIEDACEAIGAAYKERPAGSLGDAAVFAFYPNKQVTTGEGGMVVTNREPWAHLLRSLRNQGRDVFDGWLNHTRLGYNYRLDELSAALGLVQVSRLEQLLAKRARVAAWYNERLASLELIETPRNVPTTTHMSWFVYVVRIVPPARRDTVVHLLAERGIPSRPYFTPIHLQPFYRERFGYRGGEFPVTEHLGAVSLALPFSGVMTETQVDEVCETLRDAVERSIALPATRGVSR
>NC_009523.1|WP_011958846.1|5215328_5216900_-|malate-synthase-A
MDTPYRVELLGPTRPEWSEILTAEALDFVASLARQFEHRRRALLAARDQRWADIKSGALPDFLPETVDIRGGDWRVASIPADFSNRRVEITGPTDRRMVINALNSGAQVFMADFEDANAPTWENIVQGQLNLRDAVRRTITFVSPEGREYRLNDTTATLAVRPRGWHLVEKHVHVDDEPVAGAFFDFGLYFFHNAHELIRRGSGPYFYLPKMQSHLEARLWNDVFNFAQDRLGIPHGTIRATVLIEHILAAFEMEEILYELREHSSGLNLGRWDYIYSFIKTFSHRDDWIFPDRAQVTMTTHFLRSAAELVVYACHKHGAHALGGMSAFIPNRREPEITERALAQVRADKEREAKQGFDGAWVAHPDLVPTVLEVFNTAFPGDHQIHYVPEVHVTAADLLTIPQGTITEAGLRNNINVALQYLEAWLGGRGAVAIFNLMEDVATAEIARSQIWQWVRYNAKLNDGRTVDETMYKTIRDEELHALVTARTGDHHFAQAAELLDELTLSHDFVEFLTIPGYRRLD
>NC_009523.1|WP_011958845.1|5214020_5215307_-|isocitrate-lyase
MSAVNRDQEIAELERRWATDPRWQGIRRDYSAADVVRLRGTLKIEYTLANVGARRLWDLLQTEPYVATFGALTGAQATQMVRAGIKAIYMSGWQVAADANLAGQTYPDQSLYPSNSVPALVRRINNALMRADQIHASEGHNDIYWYAPIVADAEAGFGGPLHAFELTKAMIEAGASGVHFEDQLASEKKCGHLGGKVLVPTSQFIRTLTAARLAADVLDVPTVLIARTDAQAATLLLSDADEYDRPFITGERTPEGFYRVKSGLDAAIARGLAYAPYADLIWCETAHPDLDEARRFAEGIHAKFPGKMLAYNCSPSFNWKRYLDEATIATFQRELAAMGYKFQFITLAGWHMINYYAFELAKAYAAEGMTAYVRLQQAEFAAEQHGYTATRHQREVGTGYFDEVSTIISGGLSSTTALAGSTEEEQFH
>NC_009523.1|WP_011958844.1|5212421_5213891_+|DNRLRE-domain-containing-protein
MFNQPRTRTTGIIRRIARLIGIVILAMVTTASLSPLAGYAEQGDTSAGTTIYLPLVAKASCSADLPRINAPRFSGAIPFAQTAIAWFGKVSPTQNYTDIRVGYNANELYVYLAIFDRHLWYDDNPTPQTLTQWDAVTLLLDTSGGAVLSPASWKIVAQLYGDPSPQRRAVYRGSATGWQATSISFNAVPGWRGNALNDNSDTDRGWAMGFTIPFSSLGLSSAPLDGTSWRMAVIVHDRDTRAGPPIGDQFWPPQGSLDSPGCWGVLNFGLPSYQSNVTPTGSVTIRRPTERSPLVPDADVGGAITNQCPGDENHIWNEWGNRNYGRAPDFNIQNQSDIADWPCFAKYYVTFPLDSIPPGKVIVSATLTLHQFGNSGGMDVAKPSWIQVLTAAGDWSEDTITWNNAPIAYENVGGSWVNPTTLTGWPGTPRTWDVSYAVARAYARGEPLRLILYSADSDYHSGKYFVSSDTGDWNIAGRPRLDVRWGEAR
>NC_009523.1|WP_041334277.1|5210976_5211918_+|hydroxymethylglutaryl-CoA-lyase
MNALPRFPDHVSIREVGPRDGLQNEDVILTTTQKVQLIDRLADTGLTLIEVGAFVRPANVPQMADTADVFAAISRRPGVVYSAIVPNAIGARRAVAAQADALQVFLSASESHNRSNVNMSIEQSLAQAADIAAIAREAGVCFEAVVSVAFGCPFEGDVPLDRVMDLTARLFDLGAEQVTFGDTTGMGHPALVRDLVLAFYERFPQAHPRLHLHSARGAGLANVLMALSLGVDRFDASVGGIGGCPFAPGAPGNICTEDLVHMLHEMGISTGIRLPALLDVARMLEGMLGRTVPGQTIKAGICKHLPPDGAPRR
>NC_009523.1|WP_011958842.1|5210115_5210931_+|response-regulator-transcription-factor
MKQPAKILVVDDERSVRIMLETALRAHGYRVETAENGATARMRLGGEEFDLLLLDLQLGDVDGIEILREVKEQSPATEVILLTAHGSINSAIAALRYGAFDYLLKPAQITEIRERVERALHHRRVNLQRTELLQRISESARALGLIEGGGNPVPAPTASNDYLTVGPLVLDLRRHAAYLGEHTLTLTRTEFALLTALAQNPDTALSYTTLSEAVYGRAQAEEEARSLLRPHIARLRQKLDATRTPGIALVSIRSMGYMLQTEDAPAPGSAL
>NC_009523.1|WP_011958852.1|5223105_5223756_+|flavodoxin
MTTTNSPSRRRFLKAAGLTIAGATLTCAGLGVAATRPPAVELPDRTLEGEQAVNNRILVTYATRAGSTAEIATAIAETLAARGYSIDLKPVNEKPDLSGYAAVVLGSAIRMGRWLPEAVDFVKAHRDSLNAVPVALFTVHMLNTGDDESSRTGRLAYLNDIRPLLPGAGEVYFTGAMDFKRLSFLDRLIAKMVGAIEEDRRDWGAIKQWARTVEVG
>NC_009523.1|WP_011958853.1|5223887_5224949_-|MaoC-family-dehydratase
MSVKTNPGNFFEDFRLGQEIVHATPRTVTEGDVALYTSLYGTRFALNSSTPFAQTLGLERAPLDSLLVFHIVFGKTVPDISLNAIANLGYAGGRFGAIVYPGDTLSTTSTVIGLRQNKDGKTGVVYVHSVGVNQRNEMVLEYTRWVMVRKRDPNAPAPETVVPTLPESVAVEDLVAPYRVQPGAYNLAYAGSPYLWDDYEVGEKIDHVDGVTIEEAEHMQATRLYQNTARVHFNQHVEKEGRFGRRIVYGGHIISLARALSFNGLANALSIAAINSGRHTNPSFAGDTIYAWSEILAKMEIPGRTDIGALRVRTVAAKDRPCHDFPYQNPDGAYDPSVVLDFDYTVLMPRRMG
>NC_009523.1|WP_011958854.1|5224964_5226008_-|CoA-ester-lyase
MKLPIHFYKPLAVGAPQPIRELPVRPERVIHFFPPHVEKIRARIPDVAKQVDVLCGNLEDAIPMDAKEAARAGFIEVARATDFGDTALWVRVNALNSPWVLDDIAEIVAAVGNKLDVMMIPKVEGPWDIHFVDQYLALLEAKHQIQKPILIHALLETAQGMMNLEAIAGASPRMHGFSLGPADLAASRGMKTTRVGGGHPFYGVLADPQEGQEHRPFYQQDLWHYTIARMVDVAVAHGLRAFYGPFGDLKDEAACEAQFRNAFLLGCTGAWSLAPNQIPIAKRVFSPDVNEVLFAKRILDAMPDGSGVAMIDGKMQDDATWKQAKVIVDLARMIAKKDPDLAQAYGF
>NC_009523.1|WP_011958855.1|5226017_5227244_-|2-methylfumaryl-CoA-isomerase
MNGILSGMRVVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLDYKRWPVTLDGRHSLFWAGLNKGKRSIAVDIRHPRGQEILTHLICAPGDNAGLFITNFPARGWLSYDALKAHRADLIMVNLLGRRDGGSEVDYTVNPQLGLPFMTGPFSSPEVVNHVLPAWDIVTGQMIALGLLAAERHRRLTGEGQLVKLALKDVGLAMIGNLGMIAEVMVNDTDRPKQGNYLYGAFGRDFETLDGKRVMVVGLTDLQWKALGKATGLTDAFNALGERLGLNMDDEGDRFRARREIAALLEPWFHARTFADVQRIFEQHRVTWGPYRTVREAIAHDPDCSTDNPMFALVDQPGIGAYLMPGSPLDFSTVPRLPPQPAPRLGAHTDEILLEVLGLSEGEVGKLHDEGIVAGPEEA
>NC_009523.1|WP_011958856.1|5227578_5228799_-|CoA-transferase
MDGHESNLPLAGIRVIDAATVVAAPFCATLLGEFGADVLKVEHPLGGDALRRFGTPTFRDGDTLTWLSEARNKRSVTLNLQHPDGARIFKELAAKSDVLCENFRPGTLEKWGLGWDVLSQINPRLIMLRVTGYGQTGPYKDRPGFARIAHAVGGISYLAGMPKGTPVTPGSTTLGDYMTGLYGCIGVLIALHYREKTGRGQYIDAALYESVFRCSDELVPAYGMYKKVRERHGPHHNDFACPHGHFQTKDGKWVAISCATDKLFARLAKAMGRPELASSSIYGDQKVRLQHANDVNEIVRDWCSSLTRAEVLERCYATATPAAPLNDIADIFGDRQFHARRNLVAIDVDNTGETIIVPNVVPKLSETPGRIKSLGPRLGEHTEEVLKDLLGMSDAEIGELRARRVI
>NC_009523.1|WP_157041410.1|5228835_5230200_-|CoA-transferase
MGEMGQEQSSGSGETPPTPAADSSSMGEMGQEQSSPFPAASFAEAPFAERSLENPDRMPLSGIRVIDVGNFLAGPYAASILGEFGAEVLKVEHPIGGDPMRRFGTPTTRHDATLAWLSEARNRKSVTIDLRQREGVELFLKLVAKSDVLIENFRPGTMEEWGLGWDVLCKANPGLVMLRVSGYGQTGPYRRRSGFAHIAHAFGGLSYLAGFPGETPVLPGTAPLGDYMASLFGAIGILLALRHKEKTGRGQVIDVGIYEAVFRLLDEIAPAYGLFGKIREREGSGSFIAVPHGHFRTKDDKWVAIACTTDKMFERLAEAMERPELASPELYGDQRKRLAARDTVNQITIEWVGSLTREEVMRRCLEKEVPVGPLNSIADIFEDEHFRARGNLACVEAEGVGGVVVPNVVPTLSETPGRITNLGPPLGNATYEVFRELLNISADEIKRLRSRKII
>NC_009523.1|WP_157041186.1|5230711_5230999_-|hypothetical-protein
MMEIEHLIRYTPCAVGLMEIEHLIRYTPCAVGLMEIENIIRSTERDVGLMEMKNINRYAPFAVGLMEIENLFRYPALAVGLKPSASQGEARLRGL
>NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein
MTSEDWTAWIGRTEQVEDDISPAQAAAAAATLEPPPPLPMKGSALPPLWHWFYFLPRAPQSQLGIDGHPQRGGFIPPIPYPRRMFAGARIRFHHPLIIGQPARREGVIRNVTLKSGRSGPLAFVTVGYDIYQENTLCIEEEQDIVYREPGAAVPAPVPIDLPPPPEGAWVRTVTPDTRLLFRFSALTFNAHRIHYDRPYARHEEGYPGLVVHGPLTAVMLMELVRHNTARPIVGFSFRSQAPLFDLAPFRLIARPDGDRVELEAQGPDGATALSAVVELGES
>NC_009523.1|WP_011958859.1|5232556_5233045_+|hypothetical-protein
MELDDKLKAELIATARSLKGSERRMFMARTVKMLGPGGQRLAERELGWNRATIRKGMRELERGVTCLDGTRLRGRKPVEARLPNLLHDLRDLIETWRRAHPECRNDARAPCMSAEDVRRALIEQKGYSDSILPSLQTIAARMRALGYRPRRSIRYLRRRRDR
>NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein
MEAEMRAFVDSLRKNITAEDVVNLEACLNCKMCGEACAWYLVTGDEKLHPTHKTGFIRQIYQRYMTVEGQVGGALGLVPTPTVADLQENMRYFWACTACGRCTLACPTGISIRRIVRLARAAYSDSGLSHANPTIRSIVENTERYRHSFGLTVPQVIGRVGLFLRSEGIEVPVDVHGAEMLFVCPAAGNTKIPDYGIKLIKILNAAGVSYTVSPYVIDTGTEIDHIAVHHNLSRQMLEEWEQEADRLGVEKILLVECGCDARTLYAEASETLGRPFRYPIISVDTLMLDLIKQGRLPVEKIDTKITLHDPCYATRLSGLGDTFRELLNLVSNNFIEMTPNREHNYCCNGGAGGMRLPENTELRRKISVLKANQIRATGAEYVTSPCVVCTLSLEDTCHTYGLAQPGERMALVLFEVVYDAMEPALAKRGELDRMYVPAELRNRDHDFFLAHSIEGRMAALMQSPEFPALLDWLERDEIVKRFSTTHPQVYEHLRSLREMTTPSMPAMRARAVAGQ

Crispr_ID: NC_009523_98

• CRISPR_ID: NC_009523_98
• CRISPR_location: 5230791-5231009
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 4 spacers

Consensus repeat of NC_009523_98

Consensus_repeat	Method
TNCTCAATCTCCATCAGCCCNACGGCA	CRT

spacers of NC_009523_98

>98.1|5230818|21|NC_009523|CRT
AAGGGCGCATACCGGTTTATA
>98.2|5230866|21|NC_009523|CRT
CGTTCGGTAGAGCGGATTATA
>98.3|5230914|21|NC_009523|CRT
CAAGGCGTATACCGGATTAAG
>98.4|5230962|21|NC_009523|CRT
CAAGGCGTATACCGGATTAAG

CRISPR arrays and Neighbor proteins around NC_009523_98

CRISPR arrays

The CRISPR arrays of NC_009523_98

>merge|NC_009523|98|5230791-5231009|CRT
TTCTCAATCTCCATCAGCCCGACGGCAAAGGGCGCATACCGGTTTATATTCTTCATCTCCATCAGCCCCACGTCTCGTTCGGTAGAGCGGATTATATTCTCAATCTCCATCAGCCCCACGGCACAAGGCGTATACCGGATTAAGTGCTCAATCTCCATCAGCCCCACGGCACAAGGCGTATACCGGATTAAGTGCTCAATCTCCATCATCCATCCTGAA

>NC_009523|98|11|5230791-5231009|CRT
TTCTCAATCTCCATCAGCCCGACGGCA	AAGGGCGCATACCGGTTTATA
TTCTTCATCTCCATCAGCCCCACGTCT	CGTTCGGTAGAGCGGATTATA
TTCTCAATCTCCATCAGCCCCACGGCA	CAAGGCGTATACCGGATTAAG
TGCTCAATCTCCATCAGCCCCACGGCA	CAAGGCGTATACCGGATTAAG
TGCTCAATCTCCATCATCCATCCTGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958856.1|5227578_5228799_-|CoA-transferase	unknown	unknown	gnl|CDD|367110
NC_009523.1|WP_011958850.1|5221350_5221899_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958854.1|5224964_5226008_-|CoA-ester-lyase	unknown	unknown	gnl|CDD|225184
NC_009523.1|WP_011958851.1|5221895_5222612_+|sortase	unknown	unknown	gnl|CDD|320674
NC_009523.1|WP_011958859.1|5232556_5233045_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041410.1|5228835_5230200_-|CoA-transferase	unknown	unknown	gnl|CDD|367110
NC_009523.1|WP_011958863.1|5238333_5238996_-|phage-shock-protein-A	unknown	unknown	gnl|CDD|274372
NC_009523.1|WP_011958864.1|5239207_5240023_+|hypothetical-protein	unknown	unknown	gnl|CDD|293817
NC_009523.1|WP_011958866.1|5241180_5241891_+|hypothetical-protein	unknown	unknown	gnl|CDD|371556
NC_009523.1|WP_011958849.1|5220373_5221354_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_009523.1|WP_011958867.1|5242039_5244175_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|223732
NC_009523.1|WP_041334284.1|5240233_5241178_+|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_011958848.1|5218430_5220377_+|polysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|224011
NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein	unknown	unknown	gnl|CDD|223325
NC_009523.1|WP_041336008.1|5234985_5235807_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958853.1|5223887_5224949_-|MaoC-family-dehydratase	unknown	unknown	gnl|CDD|239535
NC_009523.1|WP_011958852.1|5223105_5223756_+|flavodoxin	unknown	unknown	gnl|CDD|372273
NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein	unknown	unknown	gnl|CDD|226300
NC_009523.1|WP_011958862.1|5236064_5238224_+|alpha-glucan-family-phosphorylase	unknown	unknown	gnl|CDD|340852
NC_009523.1|WP_011958855.1|5226017_5227244_-|2-methylfumaryl-CoA-isomerase	unknown	unknown	gnl|CDD|211976

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958856.1|5227578_5228799_-|CoA-transferase	gnl|CDD|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.60982e-138
NC_009523.1|WP_011958854.1|5224964_5226008_-|CoA-ester-lyase	gnl|CDD|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	1.12275e-65
NC_009523.1|WP_011958851.1|5221895_5222612_+|sortase	gnl|CDD|320674	cd00004, Sortase, Sortase domain. Sortases are cysteine transpeptidases, mainly found in Gram-positive bacteria, which either anchor surface proteins to peptidoglycans of the bacterial cell wall envelope or link proteins together to form pili by working alone, or in concert with other enzymes. They do so by catalyzing a transpeptidation reaction in which the surface protein substrate is cleaved at a conserved cell wall sorting signal and covalently linked to peptidoglycan for display on the bacterial surface. Sortases are grouped into different classes based on sequence, membrane topology, genomic positioning, and cleavage site preference. The different classes are called class A to F sortases. Most Gram-positive bacteria contain more than one sortase and it is thought that the different sortases attach different surface protein classes. The typical eight-stranded beta-barrel fold is observed in all known sortases, along with the conserved catalytic triad consisting of cysteine, histidine and arginine residues. Some sortases contain an N-terminal signal peptide only and the C-terminus serves as a membrane anchor, which represents a type I membrane topology, with the N-terminal enzymatic portion projecting towards the bacterial surface and the C-terminal end residing in the cytoplasm. Other sortases adopt a type II membrane topology, with the N-terminal hydrophobic segment inside the cytoplasm and the C-terminal enzymatic portion located across the plasma membrane. The N-terminus either functions as both a signal peptide for secretion and a stop-transfer signal for membrane anchoring. Sortases are also present in some Gram-negative and Archaebacterial species, but the functions of these enzymes are unknown.	5.56887e-27
NC_009523.1|WP_011958867.1|5242039_5244175_+|STAS-domain-containing-protein	gnl|CDD|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	3.97042e-110
NC_009523.1|WP_157041410.1|5228835_5230200_-|CoA-transferase	gnl|CDD|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	6.50698e-136
NC_009523.1|WP_011958863.1|5238333_5238996_-|phage-shock-protein-A	gnl|CDD|274372	TIGR02977, phage_shock_protein_A, phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects. [Cellular processes, Adaptations to atypical conditions].	2.5035e-33
NC_009523.1|WP_011958864.1|5239207_5240023_+|hypothetical-protein	gnl|CDD|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	3.8424e-10
NC_009523.1|WP_011958866.1|5241180_5241891_+|hypothetical-protein	gnl|CDD|371556	pfam11487, RestrictionSfiI, Type II restriction enzyme SfiI. SfiI is a restriction enzyme that can cleave two DNA sites simultaneously to leave 3-base 3' overhangs. It acts as a homo-tetramer and recognizes a specific eight base-paid palindromic DNA sequence. After binding two copies of its recognition sequence, SfiI becomes activated leading to cleavage of all four DNA strands. The structure of SfiI consists of a central twisted beta-sheet surrounded by alpha-helices.	3.04215e-125
NC_009523.1|WP_011958849.1|5220373_5221354_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.39882e-11
NC_009523.1|WP_041334284.1|5240233_5241178_+|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	5.99459e-29
NC_009523.1|WP_011958848.1|5218430_5220377_+|polysaccharide-biosynthesis-protein	gnl|CDD|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	2.60726e-29
NC_009523.1|WP_011958853.1|5223887_5224949_-|MaoC-family-dehydratase	gnl|CDD|239535	cd03451, FkbR2, FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.	5.8022e-58
NC_009523.1|WP_011958852.1|5223105_5223756_+|flavodoxin	gnl|CDD|372273	pfam12724, Flavodoxin_5, Flavodoxin domain. This is a family of flavodoxins. Flavodoxins are electron transfer proteins that carry a molecule of non-covalently bound FMN.	6.16208e-38
NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein	gnl|CDD|226300	COG3777, COG3777, Uncharacterized conserved protein [Function unknown].	2.93506e-80
NC_009523.1|WP_011958862.1|5236064_5238224_+|alpha-glucan-family-phosphorylase	gnl|CDD|340852	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase. This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism.	0
NC_009523.1|WP_011958855.1|5226017_5227244_-|2-methylfumaryl-CoA-isomerase	gnl|CDD|211976	TIGR04253, mesacon_CoA_iso, mesaconyl-CoA isomerase. Members of this protein family belong by homology to the family of CoA transferases. However, the characterized member from Chloroflexus aurantiacus appears to perform an intramolecular transfer, making it an isomerase. The enzyme converts mesaconyl-C1-CoA to mesaconyl-C4-CoA as part of the bicyclic 3-hydroxyproprionate pathway for carbon fixation.	0

Protein sequences

>NC_009523.1|WP_157041410.1|5228835_5230200_-|CoA-transferase
MGEMGQEQSSGSGETPPTPAADSSSMGEMGQEQSSPFPAASFAEAPFAERSLENPDRMPLSGIRVIDVGNFLAGPYAASILGEFGAEVLKVEHPIGGDPMRRFGTPTTRHDATLAWLSEARNRKSVTIDLRQREGVELFLKLVAKSDVLIENFRPGTMEEWGLGWDVLCKANPGLVMLRVSGYGQTGPYRRRSGFAHIAHAFGGLSYLAGFPGETPVLPGTAPLGDYMASLFGAIGILLALRHKEKTGRGQVIDVGIYEAVFRLLDEIAPAYGLFGKIREREGSGSFIAVPHGHFRTKDDKWVAIACTTDKMFERLAEAMERPELASPELYGDQRKRLAARDTVNQITIEWVGSLTREEVMRRCLEKEVPVGPLNSIADIFEDEHFRARGNLACVEAEGVGGVVVPNVVPTLSETPGRITNLGPPLGNATYEVFRELLNISADEIKRLRSRKII
>NC_009523.1|WP_011958856.1|5227578_5228799_-|CoA-transferase
MDGHESNLPLAGIRVIDAATVVAAPFCATLLGEFGADVLKVEHPLGGDALRRFGTPTFRDGDTLTWLSEARNKRSVTLNLQHPDGARIFKELAAKSDVLCENFRPGTLEKWGLGWDVLSQINPRLIMLRVTGYGQTGPYKDRPGFARIAHAVGGISYLAGMPKGTPVTPGSTTLGDYMTGLYGCIGVLIALHYREKTGRGQYIDAALYESVFRCSDELVPAYGMYKKVRERHGPHHNDFACPHGHFQTKDGKWVAISCATDKLFARLAKAMGRPELASSSIYGDQKVRLQHANDVNEIVRDWCSSLTRAEVLERCYATATPAAPLNDIADIFGDRQFHARRNLVAIDVDNTGETIIVPNVVPKLSETPGRIKSLGPRLGEHTEEVLKDLLGMSDAEIGELRARRVI
>NC_009523.1|WP_011958855.1|5226017_5227244_-|2-methylfumaryl-CoA-isomerase
MNGILSGMRVVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLDYKRWPVTLDGRHSLFWAGLNKGKRSIAVDIRHPRGQEILTHLICAPGDNAGLFITNFPARGWLSYDALKAHRADLIMVNLLGRRDGGSEVDYTVNPQLGLPFMTGPFSSPEVVNHVLPAWDIVTGQMIALGLLAAERHRRLTGEGQLVKLALKDVGLAMIGNLGMIAEVMVNDTDRPKQGNYLYGAFGRDFETLDGKRVMVVGLTDLQWKALGKATGLTDAFNALGERLGLNMDDEGDRFRARREIAALLEPWFHARTFADVQRIFEQHRVTWGPYRTVREAIAHDPDCSTDNPMFALVDQPGIGAYLMPGSPLDFSTVPRLPPQPAPRLGAHTDEILLEVLGLSEGEVGKLHDEGIVAGPEEA
>NC_009523.1|WP_011958854.1|5224964_5226008_-|CoA-ester-lyase
MKLPIHFYKPLAVGAPQPIRELPVRPERVIHFFPPHVEKIRARIPDVAKQVDVLCGNLEDAIPMDAKEAARAGFIEVARATDFGDTALWVRVNALNSPWVLDDIAEIVAAVGNKLDVMMIPKVEGPWDIHFVDQYLALLEAKHQIQKPILIHALLETAQGMMNLEAIAGASPRMHGFSLGPADLAASRGMKTTRVGGGHPFYGVLADPQEGQEHRPFYQQDLWHYTIARMVDVAVAHGLRAFYGPFGDLKDEAACEAQFRNAFLLGCTGAWSLAPNQIPIAKRVFSPDVNEVLFAKRILDAMPDGSGVAMIDGKMQDDATWKQAKVIVDLARMIAKKDPDLAQAYGF
>NC_009523.1|WP_011958853.1|5223887_5224949_-|MaoC-family-dehydratase
MSVKTNPGNFFEDFRLGQEIVHATPRTVTEGDVALYTSLYGTRFALNSSTPFAQTLGLERAPLDSLLVFHIVFGKTVPDISLNAIANLGYAGGRFGAIVYPGDTLSTTSTVIGLRQNKDGKTGVVYVHSVGVNQRNEMVLEYTRWVMVRKRDPNAPAPETVVPTLPESVAVEDLVAPYRVQPGAYNLAYAGSPYLWDDYEVGEKIDHVDGVTIEEAEHMQATRLYQNTARVHFNQHVEKEGRFGRRIVYGGHIISLARALSFNGLANALSIAAINSGRHTNPSFAGDTIYAWSEILAKMEIPGRTDIGALRVRTVAAKDRPCHDFPYQNPDGAYDPSVVLDFDYTVLMPRRMG
>NC_009523.1|WP_011958852.1|5223105_5223756_+|flavodoxin
MTTTNSPSRRRFLKAAGLTIAGATLTCAGLGVAATRPPAVELPDRTLEGEQAVNNRILVTYATRAGSTAEIATAIAETLAARGYSIDLKPVNEKPDLSGYAAVVLGSAIRMGRWLPEAVDFVKAHRDSLNAVPVALFTVHMLNTGDDESSRTGRLAYLNDIRPLLPGAGEVYFTGAMDFKRLSFLDRLIAKMVGAIEEDRRDWGAIKQWARTVEVG
>NC_009523.1|WP_011958851.1|5221895_5222612_+|sortase
MKSGKISTLWHHPFVMVGLAIALILLGIGAAYMVWLNMLRDQERLNPSTERLLEVSDGQRIPLAQPDPTPVPTAQAIPVAATNPESTPAPSATPEVLPPERLIIPRINVDWPITPADVDHLPKFRGVGWIFGSAFPGMPGNMVLTGHAGGPYATLTRLHEVQPGDDILVQTETATHRYRVQTIYETTPDDVLAMAPSDKTIATLITCSGDWIPERQTNARRLIVVAAYEGMAREGAGG
>NC_009523.1|WP_011958850.1|5221350_5221899_+|hypothetical-protein
MKRISAVHVGLFLILCLLFSSAMAEDRPTTAPPSTEPLTVLADVEGLGHRITGAYVIRRATDGSGRVFWRFRGMLDGEFEEVDGEAFERWSLDGSVTVELTQFNYPDFTLDQLPARRITLMPGWDGLIVIAGVPLAVKGEFKAPTAGSSPVLVVTNAGRGARVITELPNTAGSPDREGAQQP
>NC_009523.1|WP_011958849.1|5220373_5221354_+|tetratricopeptide-repeat-protein
MMSDMMVNTPAPDNASVHLMRSECLPQGASLSIESLLTLAAASPAAAAELAQQCVNAVDAVQLSADPETAIELLMRVTDVCAGTLGETHPATGALRCRLGDLLLAERRLEQARQQYEIVLAAHRPSVFGDSDAIARALSGLGDVLRTERKYVTALICLQRALRRQSEAHGVHPATAQTHTRLGALWFEQQRYATARFHFQEALAIREATLGPRDPATAQSLHNLGVTLAALGDLRSARVCLAQALAIREDRLGRTHLATAQSLEALSRVLADLGDDESAQYCLERAAALYREHSGDRRPVSATVAVQVNRRQRGGARWMNLLRREP
>NC_009523.1|WP_011958848.1|5218430_5220377_+|polysaccharide-biosynthesis-protein
MMQRLQNRHFLLFDILLVPLAIYLSFVLRLEMFNLGSYWLVCMQFCLTAVVTTPLVFRALGIYRRYWRYASFEELLLLCSATSIALALATLVFTLIDALLPVVATMPRSIPFIVPPIAATLISVPRLLVRIGAARERRRRATDRPAPVLIMGAGDAASIIVREIQRNPKLGMEVVGLLDDDPAKRGLRLHGVEVMGDRHAIPTLVARHKVRQVIIAMPGAPGKAVREIMHICESVGVTVRIMPGVHELIDGTISVSKLRNIQIEDLLRRAPVQTDTAAVRALIANRRVLVTGGGGSIGSELCRQLIRCGPSHLIVLGHGENSVFEICNELQRLAEAHAGQSPHIVPVIADIRDLERLRAVFEMHAPELVFHAAAHKHVPLMEEHPVEAISNNVIGTRNLLDVSLETGVERFVMISSDKAVNPTSVMGATKRIAEMLVLNAARISGRPYVAVRFGNVLGSRGSVVLTFKRQIAAGGPVTVTHPEMRRYFMTIPEAVQLVLQASVLGRAGEIFMLDMGEPVKVVDLARDMIRLSGLEVGRDIDICFTGIRPGEKLFEELFAHGEEYQPTAHSKIFIAAGASNNIPPDLRTDVALLEQVARANDDAAARRMLRHIVPEYCPPLPAPPIPVAENTPYPVLVRPLQPLIGGGR
>NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein
MTSEDWTAWIGRTEQVEDDISPAQAAAAAATLEPPPPLPMKGSALPPLWHWFYFLPRAPQSQLGIDGHPQRGGFIPPIPYPRRMFAGARIRFHHPLIIGQPARREGVIRNVTLKSGRSGPLAFVTVGYDIYQENTLCIEEEQDIVYREPGAAVPAPVPIDLPPPPEGAWVRTVTPDTRLLFRFSALTFNAHRIHYDRPYARHEEGYPGLVVHGPLTAVMLMELVRHNTARPIVGFSFRSQAPLFDLAPFRLIARPDGDRVELEAQGPDGATALSAVVELGES
>NC_009523.1|WP_011958859.1|5232556_5233045_+|hypothetical-protein
MELDDKLKAELIATARSLKGSERRMFMARTVKMLGPGGQRLAERELGWNRATIRKGMRELERGVTCLDGTRLRGRKPVEARLPNLLHDLRDLIETWRRAHPECRNDARAPCMSAEDVRRALIEQKGYSDSILPSLQTIAARMRALGYRPRRSIRYLRRRRDR
>NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein
MEAEMRAFVDSLRKNITAEDVVNLEACLNCKMCGEACAWYLVTGDEKLHPTHKTGFIRQIYQRYMTVEGQVGGALGLVPTPTVADLQENMRYFWACTACGRCTLACPTGISIRRIVRLARAAYSDSGLSHANPTIRSIVENTERYRHSFGLTVPQVIGRVGLFLRSEGIEVPVDVHGAEMLFVCPAAGNTKIPDYGIKLIKILNAAGVSYTVSPYVIDTGTEIDHIAVHHNLSRQMLEEWEQEADRLGVEKILLVECGCDARTLYAEASETLGRPFRYPIISVDTLMLDLIKQGRLPVEKIDTKITLHDPCYATRLSGLGDTFRELLNLVSNNFIEMTPNREHNYCCNGGAGGMRLPENTELRRKISVLKANQIRATGAEYVTSPCVVCTLSLEDTCHTYGLAQPGERMALVLFEVVYDAMEPALAKRGELDRMYVPAELRNRDHDFFLAHSIEGRMAALMQSPEFPALLDWLERDEIVKRFSTTHPQVYEHLRSLREMTTPSMPAMRARAVAGQ
>NC_009523.1|WP_041336008.1|5234985_5235807_+|hypothetical-protein
MIIDVLNIVAPVALAVFLIGVGVRMGRFALALVTRRRFRGVTPTFERAPRRLGFFEALHAVLFGPYRHFYRRANPTWGRGYLFYHVAIITEVIGYTLSAIIVFAHILFGRPVPDVAHHLEGSFNYTPANLLAIIFGNGEPLQAHFLFGDFAPYFVGITWIAVGFAVVGNLHLMITLLRKRSGAVVADIDPPAHGLRTPGRLPWDRVLVRTIIFCIIWTELFARLHLFPGVVYVHALLGMTLFTLLPFTYLFHMVYNFLAVYYAVQRRMARTIA
>NC_009523.1|WP_011958862.1|5236064_5238224_+|alpha-glucan-family-phosphorylase
MAEAEEASLNIRSADLLFTPIPERIARLRDLAYNLWWTWHPEAQDLYRHIDADLWEEDYHNPVDFLRDVRQRKLEEAAANPEYLAEYDRVMAAFDRYMAAEDTWYRRTFGNANDVTIAYFSAEFGLHESLPIYSGGLGVLAGDHVKEASDLGLPFVAVGFIYPQGYFRQRLDQSGWQEAIYSKLNFADIAATQALTADGREVVVEVDLPGRTIYAKVYRIQVGRVSLFLMDTDIHPNSPQDRELSARLYGGDQEMRIAQEIVLGIGGVRALRQLGIHPTVWHMNEGHSAFLVLELVREKVAQGMPFDEAWREVRAQSVFTTHTPVPAGNDAFPLHLMEKYFNHFWPHLGLTREQFFDLALQQQSWGPTFAMTVLALKGSHAHNGVSKLHGHVARGMWHWLYPNVPQDEVPITSVTNGIHSSTWLAPAMRRLYDEVLGPDWEEDLDNVALWAKVRDIPDERLWEVRQALKGDLVAIARERVRQRHLRLGSPPQVWPVLEPEIFTIGFARRFATYKRATLLFREPERLKALLNRRDRPVQIIFAGKAHPADDPGKLFIQQVYQMSQQPGFLGRILFLEEYDMALARALVQGVDVWLNTPRRPYEASGTSGQKAALNGVVNVSVLDGWWPEAYNGANGWAVGEAREYSSQDEQDWNDAQHLYRILEQEVIPTYYDRGSDGIPHRWLAISKESIATIAPVFSTRRMVKEYVTRLYLPVAEMQA
>NC_009523.1|WP_011958863.1|5238333_5238996_-|phage-shock-protein-A
MSIFVRIRDILSANINALLDNAEDPEKMANEYLRQLANQEYEVKTSVAAAMADLARLNRMEAQYLAETESWDRKAEAALRAGDEALAKAALARKVQASKLYEQYRDQSDAQEKQVEQLEQALVQLQTRIAEVQAKRDMIIAKKNRAQTHEAIQRTVRQATRISAMDKLDQLESRVDERLDRAEAMTKLEGDTLENKFRNLERDTAVDAEFEELKRRLGQG
>NC_009523.1|WP_011958864.1|5239207_5240023_+|hypothetical-protein
MAASSAEPSLLRRFAPRIGLMLAALLTLAWIQRPDARLHVFFPALRGDAALVQTPNGLYLLIDGGNDPDALVTALGRRMPFWRRDLALVILTSPGDAGQVAALERYRAHRALALPSSAPNATRDTWRRLLARDATPVRALRVGQRLEIDGVTIQTLDCDDAGALIRLDYGATSVVFAHNVTPAMLEHRFTRRASLLVYPWQYDPHTPLVESLHPTAIIFSDGRQSRHPPQQTYHERAVGGARLYHERVDGDIEWVSDGRRAHIIISERAGQ
>NC_009523.1|WP_041334284.1|5240233_5241178_+|site-specific-DNA-methyltransferase
MYFLEPDNIYCGDARQLLPQIEPNSIALSVWSPPYFVGKEYEEHLSFDEWKDLLRTVIHLHFPIIKPGGFLVINIADILVFKDPHMPRIQAEAVNRKRSPVTREDILRAIEQHPDFNRYQLAELLGCSEQTIDRRLNGNNIRGGKYDIQTRVKIVGGLVEEWALDAGFFTYDRRIWVKDAAWENSRWASLSYRSVDEFEYIFFFWKPGVTKFDRRRLSSDEWRDWGSRGVWRIPSVRSNDDHEAKFPVELPSRAIKLLTDPGDIVLDCFIGSGTTAIAAIRAGRRYIGIDILQKYVDLARNNIRRELQQISMEI
>NC_009523.1|WP_011958866.1|5241180_5241891_+|hypothetical-protein
MFLDEKYLKENPEKVEEIEKSTLRMVVQAIYDYRSKAQEIFEKEVDLVSDIGEDITREALERLGMHRIDQRLFGKIDYKCACYLFHPDYAVRQALFVDSKAEEGGSQTATLQMSQISMRVRQKRSGKSIDISGEIEPLIKINDNHYLTTTIFVKYNYRVVQSRKELTSILVTAVPNGILQDTYNPDDNDTIWLAGRDAPTRKEKFRVRLSFDRLKKKAAWRVQVIPMPPDDFHWNA
>NC_009523.1|WP_011958867.1|5242039_5244175_+|STAS-domain-containing-protein
MLAALQKFPATIARPVEVVRGYSLETLRADLVAGITVGLVLLPQALAFSLLAGLPPEMGLYSAIVASIVGALWGSSSHLHTGPTNTASLLTLSVILPLATPGTPEFIAAAGMLAILAGALRLAFGLARLGLLVNFVSDSVAVGFTAGAGILIMSNQIAPILRIDLPMGASLVDTFVLSAASIERTHLPSLILGVATIVLIAALQRVQRRLPTLLIALIIVSLVAWMLRLEEAGVRTLGALPQSLPPFANLPLFDLNLIGALANGALAVAIIGLVEASAIARAIATHSQQRLDSNQEFIGQGLANICAGLFSGYPCSGSFNRSALSLQAGARTGMGNAFSGIFVLLAIFPLAPLVAHLPRPVLAGALAITAWSMVDYRAIARIWRADRTDGAISLITLAATLLVPLQFAIISGVLMSLGAYLWRTSAPRVQSVLPDADFRHWEYQPHLPMCPQLAVVDVLGDLYFGAVNHVEEQMNALMTQNPSQRFLLLRMHSVQRCDISGIKMLQMIVRQYRDRGGGVYFVRVRPPVRQIMDVSGFTQYVGEDHFLDEDHAIDYLFHRVLDPAVCIYECEVKAFRECQNLPKRPLPAEAIPLLPTNVAPAPGSTIEPRELWRQIRSASPPRVIDVREPREYRQGHIPGAELLPLYELLTNPDQVSRDRPVVLVCRSGHRSERAAAALLSRGFGRVTILSGGMLAWEASDLLMAVEFGGER

Crispr_ID: NC_009523_99

• CRISPR_ID: NC_009523_99
• CRISPR_location: 5244201-5244548
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 5 spacers

Consensus repeat of NC_009523_99

Consensus_repeat	Method
TGNNNCGTTGAANGTTGGGACGTTGANCGTTGAA	CRT

spacers of NC_009523_99

>99.1|5244235|24|NC_009523|CRT
CGTTGAACGTGGAAGGTTGGGACG
>99.2|5244293|31|NC_009523|CRT
GGTGGAAGGTTGAAGGTTGCAGGTTGCAGGT
>99.3|5244358|18|NC_009523|CRT
GGTTGGAGCGTTGCAGGT
>99.4|5244410|53|NC_009523|CRT
CGTTGAACGTTGAACGTGGCAGGTTGGGACGTTGGAGCGTTGAACGTTGAACG
>99.5|5244497|18|NC_009523|CRT
ACGTTGAACGTTGCAGGT

CRISPR arrays and Neighbor proteins around NC_009523_99

CRISPR arrays

The CRISPR arrays of NC_009523_99

>merge|NC_009523|99|5244201-5244548|CRT
TGAAGCGTTGAAGGTTGGGACGTTGAGCGTTGAACGTTGAACGTGGAAGGTTGGGACGTGGAACGTGGAACGTTGGGACGTTGAACGTTGAAGGTGGAAGGTTGAAGGTTGCAGGTTGCAGGTTGAAGCGTTGAAGGTTGGGACGTTGAGCGTTGAAGGTTGGAGCGTTGCAGGTTGAAGCGTTGAAGGTTGGGACGTTGAGCGTTGAACGTTGAACGTTGAACGTGGCAGGTTGGGACGTTGGAGCGTTGAACGTTGAACGTGGCAGGTTGCAGGTTGGGACGTTGAAGGTTGGAACGTTGAACGTTGCAGGTTGGGGCGTTGAGCGTTGAGGCGTTGAGCGTTGAA

>NC_009523|99|12|5244201-5244548|CRT
TGAAGCGTTGAAGGTTGGGACGTTGAGCGTTGAA	CGTTGAACGTGGAAGGTTGGGACG
TGGAACGTGGAACGTTGGGACGTTGAACGTTGAA	GGTGGAAGGTTGAAGGTTGCAGGTTGCAGGT
TGAAGCGTTGAAGGTTGGGACGTTGAGCGTTGAA	GGTTGGAGCGTTGCAGGT
TGAAGCGTTGAAGGTTGGGACGTTGAGCGTTGAA	CGTTGAACGTTGAACGTGGCAGGTTGGGACGTTGGAGCGTTGAACGTTGAACG
TGGCAGGTTGCAGGTTGGGACGTTGAAGGTTGGA	ACGTTGAACGTTGCAGGT
TGGGGCGTTGAGCGTTGAGGCGTTGAGCGTTGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958871.1|5249087_5250734_+|transposase	unknown	unknown	gnl|CDD|183876
NC_009523.1|WP_083763335.1|5248524_5249076_+|hypothetical-protein	unknown	unknown	gnl|CDD|376844
NC_009523.1|WP_011958876.1|5255782_5256043_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958874.1|5253895_5254441_-|O-acetyl-ADP-ribose-deacetylase	unknown	unknown	gnl|CDD|394878
NC_009523.1|WP_157041187.1|5250577_5251147_+|hypothetical-protein	unknown	unknown	gnl|CDD|376844
NC_009523.1|WP_011958859.1|5232556_5233045_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958875.1|5254795_5255512_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958873.1|5252243_5253707_-|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143415
NC_009523.1|WP_011958863.1|5238333_5238996_-|phage-shock-protein-A	unknown	unknown	gnl|CDD|274372
NC_009523.1|WP_011958864.1|5239207_5240023_+|hypothetical-protein	unknown	unknown	gnl|CDD|293817
NC_009523.1|WP_011958867.1|5242039_5244175_+|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|223732
NC_009523.1|WP_011958872.1|5251385_5252222_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|372582
NC_009523.1|WP_157041412.1|5247275_5248556_+|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein	unknown	unknown	gnl|CDD|223325
NC_009523.1|WP_041336008.1|5234985_5235807_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_041334284.1|5240233_5241178_+|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_009523.1|WP_011958866.1|5241180_5241891_+|hypothetical-protein	unknown	unknown	gnl|CDD|371556
NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein	unknown	unknown	gnl|CDD|226300
NC_009523.1|WP_011958862.1|5236064_5238224_+|alpha-glucan-family-phosphorylase	unknown	unknown	gnl|CDD|340852
NC_009523.1|WP_011958868.1|5244611_5245607_+|class-II-fructose-bisphosphatase	unknown	unknown	gnl|CDD|377018

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958871.1|5249087_5250734_+|transposase	gnl|CDD|183876	PRK13169, PRK13169, DNA replication initiation control protein YabA.	0.00118993
NC_009523.1|WP_011958874.1|5253895_5254441_-|O-acetyl-ADP-ribose-deacetylase	gnl|CDD|394878	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. This family includes eukaryotic macrodomain proteins such as human MacroD1 and MacroD2, and bacterial proteins such as Escherichia coli YmdB; these have been shown to be O-acetyl-ADP-ribose (OAADPr) deacetylases that efficiently catalyze the hydrolysis of OAADPr to produce ADP-ribose and free acetate. OAADPr is a sirtuin reaction product generated from the NAD+-dependent protein deacetylation reactions and has been implicated as a signaling molecule. By acting on mono-ADP-ribosylated substrates, OAADPr deacteylases may reverse cellular ADP-ribosylation.	1.48016e-86
NC_009523.1|WP_157041187.1|5250577_5251147_+|hypothetical-protein	gnl|CDD|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	2.72478e-38
NC_009523.1|WP_011958873.1|5252243_5253707_-|aldehyde-dehydrogenase-family-protein	gnl|CDD|143415	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.	1.4402e-134
NC_009523.1|WP_011958863.1|5238333_5238996_-|phage-shock-protein-A	gnl|CDD|274372	TIGR02977, phage_shock_protein_A, phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects. [Cellular processes, Adaptations to atypical conditions].	2.5035e-33
NC_009523.1|WP_157041412.1|5247275_5248556_+|PAS-domain-S-box-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	4.19666e-41
NC_009523.1|WP_011958862.1|5236064_5238224_+|alpha-glucan-family-phosphorylase	gnl|CDD|340852	cd04299, GT35_Glycogen_Phosphorylase-like, proteins similar to glycogen phosphorylase. This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism.	0
NC_009523.1|WP_011958872.1|5251385_5252222_+|tetratricopeptide-repeat-protein	gnl|CDD|372582	pfam13369, Transglut_core2, Transglutaminase-like superfamily.	1.02032e-53
NC_009523.1|WP_011958864.1|5239207_5240023_+|hypothetical-protein	gnl|CDD|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	3.8424e-10
NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	2.60726e-29
NC_009523.1|WP_041334284.1|5240233_5241178_+|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	5.99459e-29
NC_009523.1|WP_011958867.1|5242039_5244175_+|STAS-domain-containing-protein	gnl|CDD|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	3.97042e-110
NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein	gnl|CDD|226300	COG3777, COG3777, Uncharacterized conserved protein [Function unknown].	2.93506e-80
NC_009523.1|WP_083763335.1|5248524_5249076_+|hypothetical-protein	gnl|CDD|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	2.83318e-35
NC_009523.1|WP_011958866.1|5241180_5241891_+|hypothetical-protein	gnl|CDD|371556	pfam11487, RestrictionSfiI, Type II restriction enzyme SfiI. SfiI is a restriction enzyme that can cleave two DNA sites simultaneously to leave 3-base 3' overhangs. It acts as a homo-tetramer and recognizes a specific eight base-paid palindromic DNA sequence. After binding two copies of its recognition sequence, SfiI becomes activated leading to cleavage of all four DNA strands. The structure of SfiI consists of a central twisted beta-sheet surrounded by alpha-helices.	3.04215e-125
NC_009523.1|WP_011958868.1|5244611_5245607_+|class-II-fructose-bisphosphatase	gnl|CDD|377018	pfam03320, FBPase_glpX, Bacterial fructose-1,6-bisphosphatase, glpX-encoded.	2.80735e-142

Protein sequences

>NC_009523.1|WP_011958867.1|5242039_5244175_+|STAS-domain-containing-protein
MLAALQKFPATIARPVEVVRGYSLETLRADLVAGITVGLVLLPQALAFSLLAGLPPEMGLYSAIVASIVGALWGSSSHLHTGPTNTASLLTLSVILPLATPGTPEFIAAAGMLAILAGALRLAFGLARLGLLVNFVSDSVAVGFTAGAGILIMSNQIAPILRIDLPMGASLVDTFVLSAASIERTHLPSLILGVATIVLIAALQRVQRRLPTLLIALIIVSLVAWMLRLEEAGVRTLGALPQSLPPFANLPLFDLNLIGALANGALAVAIIGLVEASAIARAIATHSQQRLDSNQEFIGQGLANICAGLFSGYPCSGSFNRSALSLQAGARTGMGNAFSGIFVLLAIFPLAPLVAHLPRPVLAGALAITAWSMVDYRAIARIWRADRTDGAISLITLAATLLVPLQFAIISGVLMSLGAYLWRTSAPRVQSVLPDADFRHWEYQPHLPMCPQLAVVDVLGDLYFGAVNHVEEQMNALMTQNPSQRFLLLRMHSVQRCDISGIKMLQMIVRQYRDRGGGVYFVRVRPPVRQIMDVSGFTQYVGEDHFLDEDHAIDYLFHRVLDPAVCIYECEVKAFRECQNLPKRPLPAEAIPLLPTNVAPAPGSTIEPRELWRQIRSASPPRVIDVREPREYRQGHIPGAELLPLYELLTNPDQVSRDRPVVLVCRSGHRSERAAAALLSRGFGRVTILSGGMLAWEASDLLMAVEFGGER
>NC_009523.1|WP_011958866.1|5241180_5241891_+|hypothetical-protein
MFLDEKYLKENPEKVEEIEKSTLRMVVQAIYDYRSKAQEIFEKEVDLVSDIGEDITREALERLGMHRIDQRLFGKIDYKCACYLFHPDYAVRQALFVDSKAEEGGSQTATLQMSQISMRVRQKRSGKSIDISGEIEPLIKINDNHYLTTTIFVKYNYRVVQSRKELTSILVTAVPNGILQDTYNPDDNDTIWLAGRDAPTRKEKFRVRLSFDRLKKKAAWRVQVIPMPPDDFHWNA
>NC_009523.1|WP_041334284.1|5240233_5241178_+|site-specific-DNA-methyltransferase
MYFLEPDNIYCGDARQLLPQIEPNSIALSVWSPPYFVGKEYEEHLSFDEWKDLLRTVIHLHFPIIKPGGFLVINIADILVFKDPHMPRIQAEAVNRKRSPVTREDILRAIEQHPDFNRYQLAELLGCSEQTIDRRLNGNNIRGGKYDIQTRVKIVGGLVEEWALDAGFFTYDRRIWVKDAAWENSRWASLSYRSVDEFEYIFFFWKPGVTKFDRRRLSSDEWRDWGSRGVWRIPSVRSNDDHEAKFPVELPSRAIKLLTDPGDIVLDCFIGSGTTAIAAIRAGRRYIGIDILQKYVDLARNNIRRELQQISMEI
>NC_009523.1|WP_011958864.1|5239207_5240023_+|hypothetical-protein
MAASSAEPSLLRRFAPRIGLMLAALLTLAWIQRPDARLHVFFPALRGDAALVQTPNGLYLLIDGGNDPDALVTALGRRMPFWRRDLALVILTSPGDAGQVAALERYRAHRALALPSSAPNATRDTWRRLLARDATPVRALRVGQRLEIDGVTIQTLDCDDAGALIRLDYGATSVVFAHNVTPAMLEHRFTRRASLLVYPWQYDPHTPLVESLHPTAIIFSDGRQSRHPPQQTYHERAVGGARLYHERVDGDIEWVSDGRRAHIIISERAGQ
>NC_009523.1|WP_011958863.1|5238333_5238996_-|phage-shock-protein-A
MSIFVRIRDILSANINALLDNAEDPEKMANEYLRQLANQEYEVKTSVAAAMADLARLNRMEAQYLAETESWDRKAEAALRAGDEALAKAALARKVQASKLYEQYRDQSDAQEKQVEQLEQALVQLQTRIAEVQAKRDMIIAKKNRAQTHEAIQRTVRQATRISAMDKLDQLESRVDERLDRAEAMTKLEGDTLENKFRNLERDTAVDAEFEELKRRLGQG
>NC_009523.1|WP_011958862.1|5236064_5238224_+|alpha-glucan-family-phosphorylase
MAEAEEASLNIRSADLLFTPIPERIARLRDLAYNLWWTWHPEAQDLYRHIDADLWEEDYHNPVDFLRDVRQRKLEEAAANPEYLAEYDRVMAAFDRYMAAEDTWYRRTFGNANDVTIAYFSAEFGLHESLPIYSGGLGVLAGDHVKEASDLGLPFVAVGFIYPQGYFRQRLDQSGWQEAIYSKLNFADIAATQALTADGREVVVEVDLPGRTIYAKVYRIQVGRVSLFLMDTDIHPNSPQDRELSARLYGGDQEMRIAQEIVLGIGGVRALRQLGIHPTVWHMNEGHSAFLVLELVREKVAQGMPFDEAWREVRAQSVFTTHTPVPAGNDAFPLHLMEKYFNHFWPHLGLTREQFFDLALQQQSWGPTFAMTVLALKGSHAHNGVSKLHGHVARGMWHWLYPNVPQDEVPITSVTNGIHSSTWLAPAMRRLYDEVLGPDWEEDLDNVALWAKVRDIPDERLWEVRQALKGDLVAIARERVRQRHLRLGSPPQVWPVLEPEIFTIGFARRFATYKRATLLFREPERLKALLNRRDRPVQIIFAGKAHPADDPGKLFIQQVYQMSQQPGFLGRILFLEEYDMALARALVQGVDVWLNTPRRPYEASGTSGQKAALNGVVNVSVLDGWWPEAYNGANGWAVGEAREYSSQDEQDWNDAQHLYRILEQEVIPTYYDRGSDGIPHRWLAISKESIATIAPVFSTRRMVKEYVTRLYLPVAEMQA
>NC_009523.1|WP_041336008.1|5234985_5235807_+|hypothetical-protein
MIIDVLNIVAPVALAVFLIGVGVRMGRFALALVTRRRFRGVTPTFERAPRRLGFFEALHAVLFGPYRHFYRRANPTWGRGYLFYHVAIITEVIGYTLSAIIVFAHILFGRPVPDVAHHLEGSFNYTPANLLAIIFGNGEPLQAHFLFGDFAPYFVGITWIAVGFAVVGNLHLMITLLRKRSGAVVADIDPPAHGLRTPGRLPWDRVLVRTIIFCIIWTELFARLHLFPGVVYVHALLGMTLFTLLPFTYLFHMVYNFLAVYYAVQRRMARTIA
>NC_009523.1|WP_011958860.1|5233404_5234952_+|(Fe-S)-binding-protein
MEAEMRAFVDSLRKNITAEDVVNLEACLNCKMCGEACAWYLVTGDEKLHPTHKTGFIRQIYQRYMTVEGQVGGALGLVPTPTVADLQENMRYFWACTACGRCTLACPTGISIRRIVRLARAAYSDSGLSHANPTIRSIVENTERYRHSFGLTVPQVIGRVGLFLRSEGIEVPVDVHGAEMLFVCPAAGNTKIPDYGIKLIKILNAAGVSYTVSPYVIDTGTEIDHIAVHHNLSRQMLEEWEQEADRLGVEKILLVECGCDARTLYAEASETLGRPFRYPIISVDTLMLDLIKQGRLPVEKIDTKITLHDPCYATRLSGLGDTFRELLNLVSNNFIEMTPNREHNYCCNGGAGGMRLPENTELRRKISVLKANQIRATGAEYVTSPCVVCTLSLEDTCHTYGLAQPGERMALVLFEVVYDAMEPALAKRGELDRMYVPAELRNRDHDFFLAHSIEGRMAALMQSPEFPALLDWLERDEIVKRFSTTHPQVYEHLRSLREMTTPSMPAMRARAVAGQ
>NC_009523.1|WP_011958859.1|5232556_5233045_+|hypothetical-protein
MELDDKLKAELIATARSLKGSERRMFMARTVKMLGPGGQRLAERELGWNRATIRKGMRELERGVTCLDGTRLRGRKPVEARLPNLLHDLRDLIETWRRAHPECRNDARAPCMSAEDVRRALIEQKGYSDSILPSLQTIAARMRALGYRPRRSIRYLRRRRDR
>NC_009523.1|WP_011958858.1|5231358_5232207_+|hypothetical-protein
MTSEDWTAWIGRTEQVEDDISPAQAAAAAATLEPPPPLPMKGSALPPLWHWFYFLPRAPQSQLGIDGHPQRGGFIPPIPYPRRMFAGARIRFHHPLIIGQPARREGVIRNVTLKSGRSGPLAFVTVGYDIYQENTLCIEEEQDIVYREPGAAVPAPVPIDLPPPPEGAWVRTVTPDTRLLFRFSALTFNAHRIHYDRPYARHEEGYPGLVVHGPLTAVMLMELVRHNTARPIVGFSFRSQAPLFDLAPFRLIARPDGDRVELEAQGPDGATALSAVVELGES
>NC_009523.1|WP_011958868.1|5244611_5245607_+|class-II-fructose-bisphosphatase
MILSRNTGLDLVRATEAAAISAGRWMGLGRRDEANDAAEQAMAATLDLLDIDGHIVIGEEARSKAKSGLVSGRRVGRGGPPVDVVVDPVDGLRLLAQGRSGAISVAAVAPRGALWSPAPAAYMDKLVVSRETAHALVPECLGAPAGWTLALIARTLGKEIRDLVVFVLDRPRHTDLVNEIRAAGARVMLADDGDIAGAVLAAMPGGPVDLLMGIGGAAEGIIAACAVRSLGGAMLARLAPQSAAEREAVERSGLDIRRVLTCEDMVATNEVFFVATGITDGLLLHGVRYQRDRAETNSLILRCETRTRRIIHAEHLLHDVHAVVGKEREPR
>NC_009523.1|WP_157041412.1|5247275_5248556_+|PAS-domain-S-box-protein
MTNGKIAAIEAENAMLRQRISELEAQLTSRNDHIAPSNHQEIEEFRGFRTLIETAPQAIGIITLDGVITYANAAFCSLIGYDTLIGAHMTMLHFEEDLPVLQASLQDVMHHGVWRGVARLRRRDGSAIPVRINAFVIRDDDGQPMAMTGMFEDLTEELRREERLRLFEALVENAPDAIGVADFKGNIIYANAAYQALTGYGEQLIGMNGFDYIVEEDHRSAQIALARLAEGKAAFLETHIRRKDGSIVPVASTMYAQPAPGGELRIIGFLRDISDQKRAEAERFALQQQVIEAQRAAIRELSTPLIPISETAVIMPLVGAIDSARAQQIIDTLLEGVAAHRAEMAIVDITGVQVVDTQVANALVRAAQAVRLLGAQVILTGIKPQVAQTLVQLGVSLEGIRTTGSLQTGVRLALTGDATKHRNGKP
>NC_009523.1|WP_083763335.1|5248524_5249076_+|hypothetical-protein
MRRNTGMANHRRMPEGSVFRDGRGAASRASIGFANNDFLSCGERRMPVWVTTLSNDNARFTSAERRVGVIVLAMIALWLSEPLHGIHSSLCGERGVARVFGPQKGATPEQVAMLEQGLEHYASVIQRDIGLDVRLSPGSGASGGLGAGLHALLGATLHNRYAIVMQYPLQNCWAAGDGGAKIW
>NC_009523.1|WP_011958871.1|5249087_5250734_+|transposase
MQIPDLNPDSIADLATRQIVIQLLNVIETLAAENAALRVENQNLRDEVARLKGRSGKPDIKPPTPPPSPPPADHSSEAERRTRTPRGKPKKNATLIVTHEERCGVDPATLPPDAVRHGTTDSIVQRLRIDVEVVRFVRERWYVPSTNTLITAPLPPGYRGGFCPTTHTIVPALGHGANVSQPALLRFLRDVGLKIGTGTVARMLLDPKGRWADEAAAIHQTGLATGSWVATDQTSTRVDGQNEVCHVVGNAWFTSYHTRPGGTRQDVLAVIWGQELRYRLNDESLAWLQARSLPHTLLRRLREALPRGTDMTAAELQQHLTNAGITLTPQQVQPVGDALALAAYHAQTQAPVLRWLLSDDAPVYDHLTTTHALCWVHDWRHYAKLAPRAPHHQAELAAFGERYWTFYRDLLAYQQAPTAAERARLADAFDALVEKETGYAALDDRISKTADKRTQLLAVLKHPDIPLHNNDMELAARRRVRKRDISFGPQSRDGARAWDTFQTLAATAAKLGVGFFHYLRDRIVTPETTLTLAERVAQRAGIAVPSSA
>NC_009523.1|WP_157041187.1|5250577_5251147_+|hypothetical-protein
MGYLPNPGRHRRQTRRGVLSLSPRPHRHAGDHPHLSRTGSATGGYRCAFIGLIQRFWRGYVMQYLDLDRQLASADLVITAEGTIDGQTPYGKIPAAMTRRDQRYGIPVVVLAGAIGADADANYQYGITAFQSIVRGPCPIEDAIRDADALTAACAEGIMHLIQIGQKLANRQYLPGQRKRERMQTTLVL
>NC_009523.1|WP_011958872.1|5251385_5252222_+|tetratricopeptide-repeat-protein
MTSPARRRFRAIAQLPDDQINLAEAALCIAWEDQGEGNPSASLRRIDALAATAQERIAGRRGSRAIVAALNVYLFDELGFRGNFWDYSDPGNSFLDQVIARRVGLPILLSVLYLEIGWRLHLPVVGLALPGHFLVRYVDQQNGDLYIDPFNRGRLWSLAECERQIASFAGTINPALVQQIMAPPSPRSILLRILRNLKGAYIQREQFERALAAVDRMLLLSFDAAELRDRGLLRARLGHWSGALADLERYAHMAPQASDLETIRRQVRALAEAMIPLN
>NC_009523.1|WP_011958873.1|5252243_5253707_-|aldehyde-dehydrogenase-family-protein
MSESSARIYRNYIGGAWLASLARRHAPNINPANAEDYIGDVPLSINDEAIAAAEVAAHALRSWRRTPAPARGALVLRAAQLLAERAEPIARAIVREQGKTLAEARAEVRHAIAYAEFCGAAAAMPEGATVPLSSAGRFGYTRRRPLGVVALLTPDWSPLALPLERLAQALITGNTVVVKPALATPETAEWLVRCFADAGAPSGVVNLVHGASDETGATLIDHPAVRAVWIGGPHADIAGVRRQADMRDIRFMGEHRDVNPVIVLEDADLDLALSGVIAGAFGNAGQTHTATKRVVLVHPVADAFLEALVARVCAMRLGNGLNEQVSLGPCTDEAQIQQALDLIEQARAEGAEVLCGGVRAHDGELAHGFFLRPTIVDRVRPDMRIAQEAAPGPVLAVTRVESFAEALTLVHQPQQLVAASLYTRDGARMLRFTDDIRARSIHINAPTTGNEPHLPVHHNTLLDFFTETSAVYIEYGAERGRLQDEGI
>NC_009523.1|WP_011958874.1|5253895_5254441_-|O-acetyl-ADP-ribose-deacetylase
MRFAIGNAVLELIRGNIVEQDVDAIVNAANETLAPGGGVSGAIHRAAGPELADECARIGGCPTGEARITAGYRLKARHVIHAVGPRYSGNPRDAELLASAYRSALMLAASHGLQSIAFPSISTGIYGYPLDQAAPIALATCRDVLLNHPGVALVRFVLFDEETYRAYEQAAQTIGLTSIET
>NC_009523.1|WP_011958875.1|5254795_5255512_-|hypothetical-protein
MATWLERYRRGEHERVWAEMMAAGEHIRYEPLFSDALAVARETMSRARENIAVLHARLERIGYRFAYPDEAVQPPRPDVQHCIEELERRVGPMPLALRAWYEIVGSVNFIGYHPKWNNSAYSDPLVVDPIDMALEEYSIWREECRKYGSEAMGPYQAPLAPDYYHKTDIASAPHRAVVVYRIVLPNPAADAPVRDEPHQTTFVNYLRTCFRWGGFPGFEYAEERPAELAHLVRGLKAI
>NC_009523.1|WP_011958876.1|5255782_5256043_-|hypothetical-protein
MKHTSNNQDWRREFITLASLLIMTRVLDGLITYAITPDLSRETNPLVSIFGLGWAGPITMTAILPGAVIWLNYQSLSSPCDNFPHT

Crispr_ID: NC_009523_100

• CRISPR_ID: NC_009523_100
• CRISPR_location: 5261311-5261381
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_100

Consensus_repeat	Method
AAACGCTCAATCTTCATGAGCCC	CRISPRCasFinder

spacers of NC_009523_100

>100.1|5261334|25|NC_009523|CRISPRCasFinder
CACGGCACGCGGCGTATATCGGATG

CRISPR arrays and Neighbor proteins around NC_009523_100

CRISPR arrays

The CRISPR arrays of NC_009523_100

>merge|NC_009523|100|5261311-5261381|CRISPRCasFinder
AAACGCTCAATCTTCATGAGCCCCACGGCACGCGGCGTATATCGGATGAAACGCTCAATCTTCATCAGCCC

>NC_009523|100|94|5261311-5261381|CRISPRCasFinder
AAACGCTCAATCTTCATGAGCCC	CACGGCACGCGGCGTATATCGGATG
AAACGCTCAATCTTCATCAGCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958871.1|5249087_5250734_+|transposase	unknown	unknown	gnl|CDD|183876
NC_009523.1|WP_011958888.1|5268184_5269186_+|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl|CDD|376566
NC_009523.1|WP_011958878.1|5258719_5259370_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958877.1|5256044_5258294_-|hypothetical-protein	unknown	unknown	gnl|CDD|290220
NC_009523.1|WP_011958872.1|5251385_5252222_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|372582
NC_009523.1|WP_157041187.1|5250577_5251147_+|hypothetical-protein	unknown	unknown	gnl|CDD|376844
NC_009523.1|WP_011958886.1|5266229_5267171_+|thioredoxin-family-protein	unknown	unknown	gnl|CDD|379034
NC_009523.1|WP_011958873.1|5252243_5253707_-|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143415
NC_009523.1|WP_011958889.1|5269196_5271263_+|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|378217
NC_009523.1|WP_011958885.1|5265601_5266216_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011958874.1|5253895_5254441_-|O-acetyl-ADP-ribose-deacetylase	unknown	unknown	gnl|CDD|394878
NC_009523.1|WP_041334294.1|5262356_5262911_+|dCTP-deaminase	unknown	unknown	gnl|CDD|234753
NC_009523.1|WP_011958875.1|5254795_5255512_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958879.1|5259454_5261143_-|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|132912
NC_009523.1|WP_011958887.1|5267167_5268064_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl|CDD|224982
NC_009523.1|WP_011958883.1|5263382_5264300_-|cytochrome-c-biogenesis-protein-CcdA	unknown	unknown	gnl|CDD|280792
NC_009523.1|WP_011958880.1|5261482_5262082_-|histidine-kinase	unknown	unknown	gnl|CDD|378377
NC_009523.1|WP_011958876.1|5255782_5256043_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958882.1|5262920_5263358_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239645
NC_009523.1|WP_011958884.1|5264320_5265361_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|225915

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958871.1|5249087_5250734_+|transposase	gnl|CDD|183876	PRK13169, PRK13169, DNA replication initiation control protein YabA.	0.00118993
NC_009523.1|WP_011958888.1|5268184_5269186_+|fumarylacetoacetate-hydrolase-family-protein	gnl|CDD|376566	pfam01557, FAA_hydrolase, Fumarylacetoacetate (FAA) hydrolase family. This family consists of fumarylacetoacetate (FAA) hydrolase, or fumarylacetoacetate hydrolase (FAH) and it also includes HHDD isomerase/OPET decarboxylase from E. coli strain W. FAA is the last enzyme in the tyrosine catabolic pathway, it hydrolyzes fumarylacetoacetate into fumarate and acetoacetate which then join the citric acid cycle. Mutations in FAA cause type I tyrosinemia in humans this is an inherited disorder mainly affecting the liver leading to liver cirrhosis, hepatocellular carcinoma, renal tubular damages and neurologic crises amongst other symptoms. The enzymatic defect causes the toxic accumulation of phenylalanine/tyrosine catabolites. The E. coli W enzyme HHDD isomerase/OPET decarboxylase contains two copies of this domain and functions in fourth and fifth steps of the homoprotocatechuate pathway; here it decarboxylates OPET to HHDD and isomerises this to OHED. The final products of this pathway are pyruvic acid and succinic semialdehyde. This family also includes various hydratases and 4-oxalocrotonate decarboxylases which are involved in the bacterial meta-cleavage pathways for degradation of aromatic compounds. 2-hydroxypentadienoic acid hydratase encoded by mhpD in E. coli is involved in the phenylpropionic acid pathway of E. coli and catalyzes the conversion of 2-hydroxy pentadienoate to 4-hydroxy-2-keto-pentanoate and uses a Mn2+ co-factor. OHED hydratase encoded by hpcG in E. coli is involved in the homoprotocatechuic acid (HPC) catabolism. XylI in P. putida is a 4-Oxalocrotonate decarboxylase.	2.63852e-62
NC_009523.1|WP_011958877.1|5256044_5258294_-|hypothetical-protein	gnl|CDD|290220	pfam13485, Peptidase_MA_2, Peptidase MA superfamily.	6.01592e-05
NC_009523.1|WP_011958872.1|5251385_5252222_+|tetratricopeptide-repeat-protein	gnl|CDD|372582	pfam13369, Transglut_core2, Transglutaminase-like superfamily.	1.02032e-53
NC_009523.1|WP_157041187.1|5250577_5251147_+|hypothetical-protein	gnl|CDD|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	2.72478e-38
NC_009523.1|WP_011958886.1|5266229_5267171_+|thioredoxin-family-protein	gnl|CDD|379034	pfam13098, Thioredoxin_2, Thioredoxin-like domain.	3.26198e-07
NC_009523.1|WP_011958889.1|5269196_5271263_+|DUF2029-domain-containing-protein	gnl|CDD|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	8.24276e-05
NC_009523.1|WP_011958885.1|5265601_5266216_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.45906e-32
NC_009523.1|WP_011958887.1|5267167_5268064_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl|CDD|224982	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only].	1.28472e-77
NC_009523.1|WP_011958874.1|5253895_5254441_-|O-acetyl-ADP-ribose-deacetylase	gnl|CDD|394878	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. This family includes eukaryotic macrodomain proteins such as human MacroD1 and MacroD2, and bacterial proteins such as Escherichia coli YmdB; these have been shown to be O-acetyl-ADP-ribose (OAADPr) deacetylases that efficiently catalyze the hydrolysis of OAADPr to produce ADP-ribose and free acetate. OAADPr is a sirtuin reaction product generated from the NAD+-dependent protein deacetylation reactions and has been implicated as a signaling molecule. By acting on mono-ADP-ribosylated substrates, OAADPr deacteylases may reverse cellular ADP-ribosylation.	1.48016e-86
NC_009523.1|WP_011958873.1|5252243_5253707_-|aldehyde-dehydrogenase-family-protein	gnl|CDD|143415	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.	1.4402e-134
NC_009523.1|WP_041334294.1|5262356_5262911_+|dCTP-deaminase	gnl|CDD|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	1.71373e-101
NC_009523.1|WP_011958879.1|5259454_5261143_-|PAS-domain-S-box-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	3.89471e-45
NC_009523.1|WP_011958883.1|5263382_5264300_-|cytochrome-c-biogenesis-protein-CcdA	gnl|CDD|280792	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.	3.50333e-27
NC_009523.1|WP_011958880.1|5261482_5262082_-|histidine-kinase	gnl|CDD|378377	pfam10069, DICT, Sensory domain in DIguanylate Cyclases and Two-component system. DICT is a sensory domain found associated with GGDEF, EAL, HD-GYP, STAS, and two component systems (histidine-kinase type). It assumes an alpha+beta fold with a 4-stranded beta-sheet and might have a role in light response (Natural history of sensor domains in bacterial signaling systems by Aravind L, LM Iyer, Anantharaman V, from 'Sensory Mechanisms in Bacteria: Molecular Aspects of Signal Recognition.' Caister Academic Press. 2010) - see (http://de.scribd.com/doc/28576661/Bacterial-Signaling-Chapter).	4.82863e-16
NC_009523.1|WP_011958882.1|5262920_5263358_-|NUDIX-domain-containing-protein	gnl|CDD|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	6.34481e-38
NC_009523.1|WP_011958884.1|5264320_5265361_-|FAD-dependent-oxidoreductase	gnl|CDD|225915	COG3380, COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only].	6.0681e-55

Protein sequences

>NC_009523.1|WP_011958879.1|5259454_5261143_-|PAS-domain-S-box-protein
MNIADSVPDPANPVALTDCLAQMERLQRIVETSNQLMFEVDPGGRFTCVNQAASTYFGVAPAACPGQPVTAFVHPDDHEKVRQWFSERSANQQRHLSEEIRVVHRHGALFHMLWRMTFHRDDTGRLQSITVITHDITEMKRQEETQRAFRLFIENSPDGFAIVDQNLRLTYTNHAFNAMLDEPSLVGRSVVELVCADDHATLVTAARTAERGQAAWDIVRYVRSDGTLITVHTGIIGLCDHQGNLIAYALVNRDMTSQLQAETELRRSEQRNRALLAAIPDLMFVLSADGIFLDYKADKLLLPPEAFLNRHVNEVLPPPLAAQALSHLECLKRTGEMQVYEYQIEFMGQIEEYEARMVPLQDSALVLARDVTAHRRAERERVAMQEQIIQAQQAALRELSTPLMPIADGVVVMPLIGVIDSARAQQIMESLLNGVSEYKAHVALIDITGVKVVDTQVAGVLLRAAQAVRMLGAQVVLTGISPEIAQTLVHIGAEIRDVKTKATLQEGIRYAMTVGNRIMSASKWFTLRHAAAPVQAFACQKMNSSEAQGRTKVRPSPVQDAG
>NC_009523.1|WP_011958878.1|5258719_5259370_+|hypothetical-protein
METRSSKNAMIIGILLVLFGVLSLLQNLGMAGFVGELVWGAAFGAGGAVFLYFFLKRDAYWWASIPAGALLGIAMTIGAEKLLPWLPDGIVGSIFLAMLGLGFLAIVLMNRSRWWAIIPGGALLSVAATAALADVLPEATVGSVLFLGLAATFAILAILRETPALRWMFVPAAVLGVMGVLLMTPAPHLIGFLGPLALIIIGIALLYGSRHREVYR
>NC_009523.1|WP_011958877.1|5256044_5258294_-|hypothetical-protein
MNLKRFTSFVMVLLLLVTTACTSLSSPDAQTATPPVAALQPSPLPSPATPPTVIPTRAQPTVAPVAAEGVYLINRRATSTRSAFEEINLVLYRATLSGDRLILRVGFHNVSDKSFYLTAAVDVSDLRLVDAAGNEYEPVTFSENLKRINPPGDFLPGQANVGDVVFPVPTGPAPYELRFPTHNPIAFQLDQPAPSATQSVPEGTYPLAVELYSGRSALVPIRLRLDSITVTQQEVIVQVAFVNTLRRGYDLGKGLKGSDARLLDAEFAAYEPIRVSDTLAENIAPPKGWLPGQAYVGEVTFPRPERMEEVRFFFPEYAAATLRFNATGLASAEVTSATGGAPPPTATPTAEQAALRELENLLERQAKALVTGDLTAYLATFAEGLRQEQQTIFERSRMLPLSDYQLSVSPSAVLVLSDLERGRVSNIAVLIRYRLRGAPEDNPFEHTVRATFERQNAEWMVSAYEPEKPPPFWWSGDIVVQETPHFLIITRPDAGDMLTKVAQECEQAYRDIQAAGLEPEERFVAYLTTTQEDFTAQTGMGSRTLGAALSLYELASEEIQTLGRAFYINGEAFKDQPDDGGPLGRLATIRHELVHLALARESRPFTPIWLVEGAAMYYAGQLPPEFRRRLVADGRLDSLSLERLTGAESLGAYDMLGQSVGYEYIFSGETVRYLIDTYGADSFREFYRSFSRVPLEKVIEEMPLFSVGFGSRFGNLSRKVTPEALASVYGVTIADLDAAVKQRLREQKP
>NC_009523.1|WP_011958876.1|5255782_5256043_-|hypothetical-protein
MKHTSNNQDWRREFITLASLLIMTRVLDGLITYAITPDLSRETNPLVSIFGLGWAGPITMTAILPGAVIWLNYQSLSSPCDNFPHT
>NC_009523.1|WP_011958875.1|5254795_5255512_-|hypothetical-protein
MATWLERYRRGEHERVWAEMMAAGEHIRYEPLFSDALAVARETMSRARENIAVLHARLERIGYRFAYPDEAVQPPRPDVQHCIEELERRVGPMPLALRAWYEIVGSVNFIGYHPKWNNSAYSDPLVVDPIDMALEEYSIWREECRKYGSEAMGPYQAPLAPDYYHKTDIASAPHRAVVVYRIVLPNPAADAPVRDEPHQTTFVNYLRTCFRWGGFPGFEYAEERPAELAHLVRGLKAI
>NC_009523.1|WP_011958874.1|5253895_5254441_-|O-acetyl-ADP-ribose-deacetylase
MRFAIGNAVLELIRGNIVEQDVDAIVNAANETLAPGGGVSGAIHRAAGPELADECARIGGCPTGEARITAGYRLKARHVIHAVGPRYSGNPRDAELLASAYRSALMLAASHGLQSIAFPSISTGIYGYPLDQAAPIALATCRDVLLNHPGVALVRFVLFDEETYRAYEQAAQTIGLTSIET
>NC_009523.1|WP_011958873.1|5252243_5253707_-|aldehyde-dehydrogenase-family-protein
MSESSARIYRNYIGGAWLASLARRHAPNINPANAEDYIGDVPLSINDEAIAAAEVAAHALRSWRRTPAPARGALVLRAAQLLAERAEPIARAIVREQGKTLAEARAEVRHAIAYAEFCGAAAAMPEGATVPLSSAGRFGYTRRRPLGVVALLTPDWSPLALPLERLAQALITGNTVVVKPALATPETAEWLVRCFADAGAPSGVVNLVHGASDETGATLIDHPAVRAVWIGGPHADIAGVRRQADMRDIRFMGEHRDVNPVIVLEDADLDLALSGVIAGAFGNAGQTHTATKRVVLVHPVADAFLEALVARVCAMRLGNGLNEQVSLGPCTDEAQIQQALDLIEQARAEGAEVLCGGVRAHDGELAHGFFLRPTIVDRVRPDMRIAQEAAPGPVLAVTRVESFAEALTLVHQPQQLVAASLYTRDGARMLRFTDDIRARSIHINAPTTGNEPHLPVHHNTLLDFFTETSAVYIEYGAERGRLQDEGI
>NC_009523.1|WP_011958872.1|5251385_5252222_+|tetratricopeptide-repeat-protein
MTSPARRRFRAIAQLPDDQINLAEAALCIAWEDQGEGNPSASLRRIDALAATAQERIAGRRGSRAIVAALNVYLFDELGFRGNFWDYSDPGNSFLDQVIARRVGLPILLSVLYLEIGWRLHLPVVGLALPGHFLVRYVDQQNGDLYIDPFNRGRLWSLAECERQIASFAGTINPALVQQIMAPPSPRSILLRILRNLKGAYIQREQFERALAAVDRMLLLSFDAAELRDRGLLRARLGHWSGALADLERYAHMAPQASDLETIRRQVRALAEAMIPLN
>NC_009523.1|WP_157041187.1|5250577_5251147_+|hypothetical-protein
MGYLPNPGRHRRQTRRGVLSLSPRPHRHAGDHPHLSRTGSATGGYRCAFIGLIQRFWRGYVMQYLDLDRQLASADLVITAEGTIDGQTPYGKIPAAMTRRDQRYGIPVVVLAGAIGADADANYQYGITAFQSIVRGPCPIEDAIRDADALTAACAEGIMHLIQIGQKLANRQYLPGQRKRERMQTTLVL
>NC_009523.1|WP_011958871.1|5249087_5250734_+|transposase
MQIPDLNPDSIADLATRQIVIQLLNVIETLAAENAALRVENQNLRDEVARLKGRSGKPDIKPPTPPPSPPPADHSSEAERRTRTPRGKPKKNATLIVTHEERCGVDPATLPPDAVRHGTTDSIVQRLRIDVEVVRFVRERWYVPSTNTLITAPLPPGYRGGFCPTTHTIVPALGHGANVSQPALLRFLRDVGLKIGTGTVARMLLDPKGRWADEAAAIHQTGLATGSWVATDQTSTRVDGQNEVCHVVGNAWFTSYHTRPGGTRQDVLAVIWGQELRYRLNDESLAWLQARSLPHTLLRRLREALPRGTDMTAAELQQHLTNAGITLTPQQVQPVGDALALAAYHAQTQAPVLRWLLSDDAPVYDHLTTTHALCWVHDWRHYAKLAPRAPHHQAELAAFGERYWTFYRDLLAYQQAPTAAERARLADAFDALVEKETGYAALDDRISKTADKRTQLLAVLKHPDIPLHNNDMELAARRRVRKRDISFGPQSRDGARAWDTFQTLAATAAKLGVGFFHYLRDRIVTPETTLTLAERVAQRAGIAVPSSA
>NC_009523.1|WP_011958880.1|5261482_5262082_-|histidine-kinase
MQPLALSDRPRSDALDRFSFASFVEEQRKTLHSRSMMLALSFLIEDYAAQSPGTHLIAAFQRFSNYRRQIRRYRNIAPRLAQAFVLGFPDETPPELPNVTPVALEAEWPLVHEWIVIAWGPTCAAALVAYDEEQCAPHRVSRRFQAIWTTSVAQIEPMVTAFYRTVGQPAPVFTRDLPAMQRTTVAMQKDLTARLRAIR
>NC_009523.1|WP_041334294.1|5262356_5262911_+|dCTP-deaminase
MTIKSDRWIQAMARERGMIEPFVAEQVRGGIISYGLSSYGYDMRVADEFKVFTNVFNTLVDPKHFDPRSFVDVRGDYCDIPPNSFALARSVEYFRIPRNVLCIVLGKSTIARCGIIVNVTPLEPEWCGYVTIEISNTTPLPARIYANEGIAQVLFLESDEPPLVSYADKAGKYQNQTGVVPPRL
>NC_009523.1|WP_011958882.1|5262920_5263358_-|NUDIX-domain-containing-protein
MNNHPDAAGCVVYRYDEHGQLLILLIHDQYGKWTLPKGHLEAGESAEAAAVREVREETGMGGKSGAFVGTITYPVQKKGASYLKRVDFFLLHADGSDAVPEAAEGITAVGWFPPHEAEERVGYEQIRHIIARAVALIPSQSSSCS
>NC_009523.1|WP_011958883.1|5263382_5264300_-|cytochrome-c-biogenesis-protein-CcdA
MSVHNTNPATTSSEARFPWRALLIGLGIALALAAIALLSQGSSNPVAPRGASMLILAPAAFLAGVFSFLSPCTLPILPAYFAFTFQAQRERIVMMTVAFFLGLATTMVLLGATATALSQLLFRNLETLTFIGGVIIIIFGVLSMLGKGFSGVQILSRPSASIAGSYLYGATFALGWTACVGPILGALLTLLATQGIAILQGAVLSFIYALGLGSPLIIVATFFSRLGTGSPVWKALRGRGFTLSIGGYTLHLHTTSLISGALLVLMGLLLATGQLTALSEWTQRTPLAQWALSLEQWVQRIFFGQ
>NC_009523.1|WP_011958884.1|5264320_5265361_-|FAD-dependent-oxidoreductase
MHLAIVGAGMAGLSAAREMRRRRPDLMITIYEKSRGFGGRVATRRRDGFVFDHGAQVIKAPDASMEHLLTAELPIEELRRMDRPVYVFHTDGTIAEGDLTLNAEPSWFYASGLNRLGKLLAADLDVRLDTRVTALRREAGSARWMLFDAQGAHVGTADAVLLTPPAPQTAEILAMSDFDPPLRDMLVRELIHVPYRRCLTMTLAYNRPIERPFYALVNVDRQHPMAWLALEHTKGSERCPPGHSLLIAQMAGPFSMQQWDAPAEELASAVIEIVSMALGEDLRQPLWYDRQGWRYALPDGMANPAVLNTTQTGLFFAGDYTVGLGRIHLAIRSGQEVADTIANWLR
>NC_009523.1|WP_011958885.1|5265601_5266216_+|Uma2-family-endonuclease
MTVEAHANSLKITRSDGLEVDLVPLQGLWTEQQYLRLTEQTNHLIEFTDGAIEVLPMPTSRHQTILLLLYERFKTAVQPTGGKVLVAPLRLRLRPGKFREPDILLLRSAGDPRYQDAFWLGADLVIEVVSPDRPERDTEEKVRDYAEAGIPEYWIVNPLDETVTVLTLEDQAYALHGIFHRGQRAISKLLDGFGIEVDEIFDAQ
>NC_009523.1|WP_011958886.1|5266229_5267171_+|thioredoxin-family-protein
MRFRLLIFLLLALLLVACAQQPTRSGQVTPVFAFTEAVVGPNRIALGLIRDGSPVNDPGAKIHLRFFDLNDTSSPVRFETDAIYYGQGLPAAIYVAYPTFDRAGSWGIEVQTTLSGQSEPTVARLRLEVKERSDVPNVGDKAIPVKTLTVRDVPDPSYLSSGRVDDLSMYQISLDAALQNGKPTALLFATPAFCRTAVCAPSLGVMQELQKTYGDRINFIHVEVFRHPFRESFEAQSAVFQKLAQEGRAPTLEERNVGLSDPMIAWGLQSEPWLFLIDANGTIVARYEGGITREEMTPALENLIAGRPPRGGS
>NC_009523.1|WP_011958887.1|5267167_5268064_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSHAHRPIIGVPCLVGIAHFARDDAWFPKIYGNVIDYLQAVEAAGGAPMLIHLTTNDDVLNTLYQQIDGLLLAGGEDIDPASYGAPRHPRLGNPDPLQDDVEIKLTRRALQDGKPILAICRGIQLLNVACGGTLYQDIPSEIPGALNHNESTDRQDMRYLAHPVLIDSDSRLADLLGATEAMVNTLHHQALRDVASALRVTARAPDGVIEAVEAGSSAWVVGVQCHPEMLWNGADPRWSRVFQAFVQAAGGVNVERSTFNLQRSTFLPSTLNLQRSNFQPSTLQPSTLQPSTLQPYNL
>NC_009523.1|WP_011958888.1|5268184_5269186_+|fumarylacetoacetate-hydrolase-family-protein
MRLVTFQFVDRQPRVGVLLGSAVIDLAAAAPLVFEDPPQPPWSLLDVLGGVPDGMGLDGAAEIVAAVIDQIGGVDDEHLVLQSGSLMIGGVEMLIPLDEARLLPPLPRPSSLRCFESSEQHMAALARLHGGGIPYFWYERPLFAFGNHAAMYGSEAYVPLPRTVAFDYELEVACVIGRSGRDISPEEAGDYIAGYLLLNDWTARDVQREELIAGFAFSKSKDAATSIGPWLATPDELQEYALDDGQFNLTLIARVNGVEQSRGNLRDLTYSFAQMIAIASEGCTLFPGDMIACGAIGGSLLEATNGQGPWLEPDDLVELEAGGLGILRNRIVA
>NC_009523.1|WP_011958889.1|5269196_5271263_+|DUF2029-domain-containing-protein
MNNVQRYVWFHGITLILAALLTATVATAITHPPMCDVGAGEDVGCARGFETRERDGYGSFRWTDGDARVTLIASGYGAPGIVEIVMAAPRPPETPSPSITLSVATTSVAVTPSDAPRRYLLLLRPDPLAGEAFHITIRSDTWKPPNDRRNLGVLVYHAGVASSRSLALPSVQHILALLAIGLSVSLVGRNAISLIGRTTVALTVIGGCGVLWVWLPARTVPFFPFYAVLLGSVALLFAWLERREPRHVPTADLRPALLAASGGVALDALLVAGVARGEWSVPVIAAQAACVVWGMWHSIGRTLTLSGVLRIALVVRLTALTTRLLSGEIGSDPDVELFYNYGRATLELGLPVVEYPSGALIPWAILALPASRELFALALPLCNTIADLVIVLAIWSMSERRSSASGNTGLACFYALSPLLLPFWHGKYDPLPTAFLALGLMAYTYGRMVWSGAALGIGGALKWTPWLAAATLALGMLRSRSSRAPASLWAFAAGGMMAVAATSIPFALIDWDRFLAPYTLQGGRAITGESVWFLAVLITAPDHWARLPAPWGSVETGGTMMGIAIGVQGIVLASLTLSALRFPSLAWRPAALAALTPAAFLLLNRVFSPQYMVTITAALLIACTIVGQSPRHTRGIVVLLTIAQAANLLIWPNTVPWWPLPSAVLFAVALAALAWLTVMTVRKGRAAD

Crispr_ID: NC_009523_101

• CRISPR_ID: NC_009523_101
• CRISPR_location: 5327565-5327664
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_101

Consensus_repeat	Method
GGGGATGAGGGGCAAAGGCGCCC	CRISPRCasFinder

spacers of NC_009523_101

>101.1|5327588|54|NC_009523|CRISPRCasFinder
TGGAATGCAGAAAATCACTCATCTCTCCCAAGAAATCTACCCTTGAGAGGCAGA

CRISPR arrays and Neighbor proteins around NC_009523_101

CRISPR arrays

The CRISPR arrays of NC_009523_101

>merge|NC_009523|101|5327565-5327664|CRISPRCasFinder
GGGGATGAGGGGCAAAGGCGCCCTGGAATGCAGAAAATCACTCATCTCTCCCAAGAAATCTACCCTTGAGAGGCAGAGGTGATGAGGGGCAAAGGCGCCC

>NC_009523|101|95|5327565-5327664|CRISPRCasFinder
GGGGATGAGGGGCAAAGGCGCCC	TGGAATGCAGAAAATCACTCATCTCTCCCAAGAAATCTACCCTTGAGAGGCAGA
GGTGATGAGGGGCAAAGGCGCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958921.1|5316309_5317869_+|glycosyl-transferase	unknown	unknown	gnl|CDD|224720
NC_009523.1|WP_011958925.1|5326314_5327421_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|377369
NC_009523.1|WP_011958924.1|5322075_5326074_+|DUF11-domain-containing-protein	unknown	unknown	gnl|CDD|350098
NC_009523.1|WP_011958934.1|5336929_5338117_-|amidohydrolase/deacetylase-family-metallohydrolase	unknown	unknown	gnl|CDD|236423
NC_009523.1|WP_049767621.1|5332868_5333813_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NC_009523.1|WP_011958933.1|5336116_5336899_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212491
NC_009523.1|WP_011958930.1|5333826_5334687_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_009523.1|WP_011958923.1|5319222_5321364_+|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl|CDD|379140
NC_009523.1|WP_085979438.1|5328069_5328462_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041192.1|5317957_5318812_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|378820
NC_009523.1|WP_011958918.1|5312471_5312735_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958927.1|5329936_5331163_+|ROK-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224851
NC_009523.1|WP_011958928.1|5331358_5332744_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270451
NC_009523.1|WP_011958931.1|5334700_5335441_+|RidA-family-protein	unknown	unknown	gnl|CDD|100004
NC_009523.1|WP_011958919.1|5313004_5314672_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041017.1|5311604_5311742_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041191.1|5312124_5312262_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041415.1|5335452_5336097_+|hypothetical-protein	unknown	unknown	gnl|CDD|187678
NC_009523.1|WP_011958926.1|5328419_5329655_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041190.1|5311864_5312002_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958921.1|5316309_5317869_+|glycosyl-transferase	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	5.31586e-11
NC_009523.1|WP_011958925.1|5326314_5327421_+|SH3-domain-containing-protein	gnl|CDD|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	2.44832e-30
NC_009523.1|WP_011958924.1|5322075_5326074_+|DUF11-domain-containing-protein	gnl|CDD|350098	cd08984, GH43-like, Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43)-like subfamily includes uncharacterized enzymes similar to those with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	1.42399e-09
NC_009523.1|WP_011958934.1|5336929_5338117_-|amidohydrolase/deacetylase-family-metallohydrolase	gnl|CDD|236423	PRK09237, PRK09237, amidohydrolase/deacetylase family metallohydrolase.	0
NC_009523.1|WP_049767621.1|5332868_5333813_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.67727e-58
NC_009523.1|WP_157041192.1|5317957_5318812_+|alpha/beta-fold-hydrolase	gnl|CDD|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	1.35405e-07
NC_009523.1|WP_011958923.1|5319222_5321364_+|PQQ-binding-like-beta-propeller-repeat-protein	gnl|CDD|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	4.04018e-10
NC_009523.1|WP_011958930.1|5333826_5334687_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.82738e-70
NC_009523.1|WP_011958928.1|5331358_5332744_+|extracellular-solute-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.11161e-30
NC_009523.1|WP_011958927.1|5329936_5331163_+|ROK-family-transcriptional-regulator	gnl|CDD|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.72389e-53
NC_009523.1|WP_011958931.1|5334700_5335441_+|RidA-family-protein	gnl|CDD|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	0.00335264
NC_009523.1|WP_011958933.1|5336116_5336899_+|SDR-family-oxidoreductase	gnl|CDD|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	3.57077e-73
NC_009523.1|WP_157041415.1|5335452_5336097_+|hypothetical-protein	gnl|CDD|187678	cd09620, CBM9_like_3, DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily may co-occur with various other domains.	3.27596e-43

Protein sequences

>NC_009523.1|WP_011958925.1|5326314_5327421_+|SH3-domain-containing-protein
MSRRRSRHSPDAGSAIGALFLLGLIGFRPFWQTVTNLALPWQIAAAVLILSVAFVILWFVRLLIRHARQRSLVRKELYALTPTEFEERVLLLLKDLGWSHLRLRGGSGDRGVDLEGEFQGTRYVVQCKRYHHNKSVSPSAVRDLVGALHIQKADRALLVTTSSFTPQGYAEARDQAVELWDGAILEQKISEAARLREDPTRRQAVQRRRLATFITLVVINGLSVLSAFAIAGPPSSAPPTIRTAPTPSPESIAGSPLGRTASSLPLPTQTPSSEEPQPTALPTPTVAPTEPPVPTTTVFNGGNVRAAPNMRGTVLDQVHAGEIVELLGRSADGNWLYIRNPRGQVGWTHRTLLTLEADISERLEVVAP
>NC_009523.1|WP_011958924.1|5322075_5326074_+|DUF11-domain-containing-protein
MRRGMVWLWLSGLIGGLIMFIPTTGQTPVARATVPNNQNWIFTPGTCDPAFQGAVFANWNPATGAPNCGVFTSGAPSVNQFDTGQVFPPNVLRDEASVTAPCENGRISGLCYRMWYVGTRPGEPYRRIGYAVSPDGVSWYRVQGTHTGGSVFEGSGTSGHSFDQNGVTTFHVIKDGGQYHMWYTGVSSDWRWVGFGYATSTNGITWVRQNGGAPVLTSRPGSGLFDDDRIIGPFVLIDEASAIAPCEGGRTSGRCFRMWYEGFRANNTFYVGHALSSDGISWSIVNGPAPLGSVLAGDPNGPLGFAAFDSNNVGLTAVIKDGAIYRMWYQAKSYQNPPEHPFGDWFTIGHVTSVDGVNWVRPNPNLLAFSGDMDTISVNPPGTNDDVWVVRLLKEDLTYRMWYATAGTPNSTRFGLAEMTQGSPITPTVLRNGDEFTITMTTQQTIPPDGSVLITLPPDVALDQFAAVELQGFEPGASLLRERAAVTDAYSGFAARDAILIRLPNGAVLGPKTIRFNLGAGAPNPSTFLIQTFDTHKVLERARVVPGDLRVTQSVASVVAGEPAVYTVTVSNVGPNAVTGAVLNSTFPAQLSGTTWTCVPSGGASCAPTSGSGNWINKTLNLPVGSSVTFTVTGDLVSTATGNLVSTVGVATPDGINELTPTDNTSTLSTPISVRGDLAITRMSNPAVPQAGQPITYTLTVTNAGPSTVVGATVVNIFPISVTNVIWNCGATSGSACPSSGSGSINAPVTLAPGGNAVFTATGVVSPAALTMPPHSAIVTVPGNVTDPDPDNNVFTDGGGLGRPADLTISKTVAPAVVVPGLPVTYTITVTNTGSADADGATVLDLFPPTISGVAWTCSGANGATCAQSSGSDNLTLSLPSFPVGGAATITITGVVAADATGNLVNTAQVLPPVGVDDPTFANNTSTLSTPISVRGDLAITRTSNPAVPQAGQPITYTLTVTNAGPSTVVGATVVNIFPISVTNVIWNCGATSGSACPSSGSGSINAPVTLAPGGNAVFTATGVVSPAALTMPPHSAIVTVPGNVTDPDPDNNVFTDGGGLGRPADLTISKTVAPAVVVPGLPVTYTIMVTNTGSANADGATVLDLFPPTISGVVWTCSGANGATCAQSSGSGNLTLSLPSFPVGGAATITIAGVVAADATGNLVNTAQVLPPVGVDDPTFANNSVTISSTLQPHTDLVVTQSLPVHAFVGQTIVYTVTVQNNGPSVAASARVSNTPPALVTVTGWACAASSGSSCGAASGSAPVDDMVTLAPGGTVTYTVTGVVFRRAVGALPFSSTVAAPTGAEDPVPSNNRAEGSTQALYVVNLPVIAR
>NC_009523.1|WP_011958923.1|5319222_5321364_+|PQQ-binding-like-beta-propeller-repeat-protein
MRSGCFGWLQIVAILTVIGILLPLAGTTQVTPARGEHLVQPSSAPRVQTTWQTARAVSVTATSVPAPANAASLYLPLVVSDQPVSGPPEEWSQHAHDAQRTGYTPQTVPYPWRWRWSWNGPNTSGGIAKVTTGGSLPRNVQPVTGGGRVYIAAGVDGVFALSEATGRQLWQRSGIGAIRSTVAYDRDTSAVFAVSANGRLYKLRAQDGAILADFNAGQTSDLPLPPAVLSDRVIFSMGNAVFAVHKQTMHQLWRYNAGATVATPPSYSPSRNVVIVATEPDLFVHAINNASGARQWRVRPVHASRTFGDPTEFRYGWPVIADGAGYVLVKVRLDWETTWRDWPQTNSEMRQFLIQNPGYQALFVLDLDDGSRPFIANVGHGGYGDGGYMPMGPQPVVKRLANGREVVYTIIRARHAYDSRWDSHFGEMMLDSETVSGLQGGDVRFIAYDYPPGSADPYLLTDEQPNVSMAGDYLFGAHWEAGFAMRILDRSAARGSFSNKITTQRLATIATSQDNADACPFNASHYCASGLENTRFYDAGFYIYYRQGKVYDKYWREYASWTVSNENVYFVSTDGAVVALTSGNPQASEVSSLPLVEAPPPPPDPQPVATIPYTEARAWEGRMVTVTGTLRYIFNNGKYVLLGFSNPHQGSFKALIRKADWERFGGRPEARYQVGQEVRVRGVIAWYQGDPAIFVTTPEQIEVLEQVLAQEAQ
>NC_009523.1|WP_157041192.1|5317957_5318812_+|alpha/beta-fold-hydrolase
MLLVLLLTSCAPSVTDRAAQPTPLLTDALPTPRLEGIAAERREVRFVSGDVELAGELDLPMGSGPHPLVFIIHHSGPVPRDAYGYLAEILLRAGYAVFRFDKRGTGASGGVYGCCERDDALAAYRAAVAQAGIDRCRVFIVAQSIGTQHLAAQYQAYLQVQRPRGVALLSNLLRADDIVRIAAPIIIIVADSEPDLNAIGPEAAAAHNARYAAGSTLYIADGAEHTLFDIRDGPIDWTDPAWVDRYHRGAMQALVQQLDAWSAVHVSGSCSSLRSRNVIANPNR
>NC_009523.1|WP_011958921.1|5316309_5317869_+|glycosyl-transferase
MIRPEAHRMPHLQTTTATGSMYRIVVIMLFAAAALLATINLPYAPRTWFDEGSHLHVPETLVRYGKYADISATPDGGVEFRYHGPTIGIGPTIMLPVAAVYQAFGIGLTQARLVIVIYFAIAVVAGYALAQRLYGGWPALIALALLLASRTVNYEGLIEYGRQVLGEAPGVAFVFLGMLAWLTALKTATELSAQRTHLIWSVLAGLGFGMALVTKNQFVLIVPLALLLTALLDWRYYRAGSWVLRLVPLVVSVACFGVWTLTQFALLGPGTFFENIQQTRQAAGGAIFVFNIRSTLRAGYYLLRPDLYGGLIVPAMAYTIWRARSRTSQGLSEALLALLIGLWLAWFVGASLGWPRYAFPAVALSALTVARLAFDTVAWLRRLLPVAATVAVVYLIAIIALPLALTARVVFTPDDSAQRFAAYLNATVPETAIIATWEPELGVLTDHNYRYPPQPTLDQAVRSTWLGGAPVQYNWYAERPTYVVVGGFGSYTGVYNTPELERHYIQVAQIGTYALFMHR
>NC_009523.1|WP_011958919.1|5313004_5314672_+|hypothetical-protein
MAVTTSAAATDVATSATRLHERSFIALVGALALILSSLPILAGHLFATPERQFAGIVYNMPDHAQYFAWMRDLARAPLAPNRLTPEPNAPAFFNLLWWTVGRIGALTGLEYAALWSGLRIVAVMAVLASGYAFLNLAVADVRQRRLAYLLFVFGGGLGFIWVIVKYIYRLPEAPFPFNIYTAEANTFWILTAFPHFGMALALIVAMMALLLQAVRTGQYRYAVVCGVLGAILGLQHAYDLITIYAVMGSFGVLVWARDRRFPAFLFRCGIIIFALSAPAAAYLSALVLLDPTWGKKLSQFDNAGAWTPPPWELPILLGVPFLLALISVRLRALQSRNDAELLVVVWFLSHFVLAYLPVKFQIHLLLGWQMPIAILAAAAVFTRVAPWLQRRRPALLRPTLALLAVLAVATNVYLVAWRFVDFRRLEAPYYLTHGEVESLAWLEAHVTADDVVLADLEYGQHVPVRTDARAFLAHWAGTLDFHGKRAMVRDVFDPAVSDARRQEILTAYRVTYLVVRERDNADEALSAAVGRYLTLAFSSGDTTVYRVTATHLPNG
>NC_009523.1|WP_011958918.1|5312471_5312735_-|hypothetical-protein
MKLFFPGVPYSWDATIAVATIAVAEACAAGTPLNIALYTAAEPMHTSKYLHSSEAGDFANEARPTLIVTWGAPVEVRSRVFLPLLSR
>NC_009523.1|WP_157041191.1|5312124_5312262_-|hypothetical-protein
MTVSRGGTTNLVRQGVSARRLATEVAAGRREARLRGREGAHPARP
>NC_009523.1|WP_157041190.1|5311864_5312002_-|hypothetical-protein
MTVSSVGTTNLVRQGVSARRLATEVAAGRREARLRGREGAHPARP
>NC_009523.1|WP_157041017.1|5311604_5311742_-|hypothetical-protein
MTVASVGTTNLVRQGVSARRLATEVAAGRREARLRGREGAHPARP
>NC_009523.1|WP_085979438.1|5328069_5328462_+|hypothetical-protein
MQGDARRRGTRTPTVTLSTIGYQLSAIDHRLSAIGYRLSAIDHRLSAIDYRLSAIECKTRLCVTRTPTATLSTIGYRLSAIDYRLSAIDYRLSPIGYRLSPIGYRMQNPPAQTRPNTYPCARSACPTQSR
>NC_009523.1|WP_011958926.1|5328419_5329655_-|hypothetical-protein
MQTSVFVFAYDLVDEGYGHVLDTIRNRAGATAVNLACSYHHARDVFPHNPRRKVRFLEGGACFFRPDPARYAGLKIQPIRSRLTDDHDPLSHCIEEAERRGMAVRAWTTNLHNTGLGSQYPDCALQNAFGDPYITCLCPANPHARAYLCALSADLASRGVQAILLESIGYHSFDHGYHHERSFVPLSPIIRFLLGLCFCPHCTAQLTARGVDMERVQRFVQGEVERVFNGETSAVEHMPVERSTLAALADGELGNMLEQRCAVVTSLVTEITEAVSAVGSTQVIAMDMSGAEVGYATGMPVGDPAPLRAWEDGLDLPAVASACHGIAVLAYARDVNRVRADLDAYTNLLPDGVHLTVGVRPMPPDCYDAGEMTAKVALLRERGVASMDVYHYGLMRLHHLDWVGQALRAQG
>NC_009523.1|WP_011958927.1|5329936_5331163_+|ROK-family-transcriptional-regulator
MRSLLAKATRQHTRNHNSRLVLRVIYEDEAISRADIARKTGLTRTTVSAVVNELIEQGLIEETGAGQSSGGRLPILLRVVHESHCVAALSFEDTQIVGALVDMRGGIQRRVSVPLQGYRPEDLPGYLTQLLDDLTADPAPHILGIGLSMPGIVDPVRGMVRRAVNFGLVDTPLRQLLQDQYRLPVYLDNAARLTALAEYMFGDGAASGNLVVISIGVGVGAGIVLNGALFSGDGFGAGEIGHVVVADNGIRCNCGNVGCLETVASVTAIVRAARRLATDPSSRLRSLASAAAAIDFNTFCRALEEGDDGVAGIVTEVGRYLGIAVAHIVGLLNVERIVLTGAIAALGPPLLEAVKTSLARHALAPLAAMTRVDLVPERHDAVLLGIAAMVLDHEFGLLRLDSQAHMQH
>NC_009523.1|WP_011958928.1|5331358_5332744_+|extracellular-solute-binding-protein
MKIPERSDTQVHGSRSTLTRRQMLRLLATGAVTAAGGALLAACGGTAPTTPPGSAPAQTSTRPLTPTFYQWIVDLHPSIPQVNSTFEGLNFQIAPVQGFGIERFVAEAKNQESTWDVYVGMTPFVEMSQLIKADVIEPWDDYIPKDVLDDILPPIREECTVNGKLYSWPFLLDVIGMAWNSNLTDKAGITTVPTTWDEYLANAKQVVDSGAAPYGATYDARGWRSLAPFTHSLSTNVYTPEGLFDFTSEPAVEALILMKKIKDLANPDILNEGTTDGGVNNTPDEGAFAAQQVAYYTKYFNAPLRFAQTGGFSDKLQMAGLPRFANSQGGTVFWTTGACLFKYGKNKEKAVEYMRALTYNQQIWKDSIAGSPTAHPGQLPPYKSIYAEWEANKPDWMQPFVALVREQFERARAITNHPFGLTQFVIGKPFWEEYLTGKESDPRAALQKAKDAVAAEIAKAG
>NC_009523.1|WP_049767621.1|5332868_5333813_+|sugar-ABC-transporter-permease
MATVTSRVASAARTWRSTYRMADYANLLFLVPATFFFVGWQIYPIIRVFVLSFTDYKYLERNPPNFVGLQNYINALNDPLFHVGLLRAFAFTAAFVPLTILIPLVLAVLIDRVTTPWLSSFYRIVLLIPAVIPGPLVFVLWKWLFDFQIGPVNTILVEWLGIFTRQTAPQWLGGTPLSLPAVIIMEVWWGLGYHTMFFLAGLAAVPKDLSEQARIDGASEWQLFWRVIVPRLLPILSILVVLRFGTAMSVIDEYLIFGGFQRTSPTYTWTVYMYDLAFRIGDWLQGYAAAIGWLGALIMMVFVVGMLYVFRSRD
>NC_009523.1|WP_011958930.1|5333826_5334687_+|carbohydrate-ABC-transporter-permease
MAAAIQRHRRRRFPTGLIARHAVINVFLVIIVLPLIWVLLMSVKSLPESYSTNFWPRQFDFSHYGFVLTRIQTLPQNMFNSIFVTLATVAITTFCAILGGYALVHVKLPGRMLLIWLLIASLFFPTRLLSLISIYEIQRQLGLLNTVVGLIFPYVTLNLAVSVLIMRGIFEQLPHELVEASRMDGCGPWRTLFLVLLPLLLNGIVVVSMVNFVGVWGEYLLAVTLTNDQATRTLPVVLASAHSGMGQWAYPRIAAVYVIAVTPGIIIFALFQRLYFKGLTEGAIKL
>NC_009523.1|WP_011958931.1|5334700_5335441_+|RidA-family-protein
MHLVNHPSGGFAFLPGGPPYSAGVVALPGFEIVRATLQRPLPYRAGFALIDRYLATVGRPATALCAIELRSPKPWSMEDFRAFNAEYRIELQTRGILLDEVNPVARTNVAPAYLPPEEPSLYAFSYTVPAATTGRTFVIAGAGDLDEHGIIAEGQTSPEAMRTKASFVMRVMLQRLAALGCGIDDVTDMTVYSVHSPLDFLTDILLSPLGVAAVHAFHWYYSRPPIAGLEFEVDMRGVRQELRIWE
>NC_009523.1|WP_157041415.1|5335452_5336097_+|hypothetical-protein
MPDLPYHAVPHVPAHWSAGSDPFSWEWITLPAITPFILADGSGPATQQTVVRLGYDADALYVRFDCDDCDIWGTYCERDDPIYDEEAVELFISPGKETPVDYFEFEISPNGIFFDARISNPDERRATLRVDTAWNADARWWARREDAVGRWTAILALPWRCLTCEPLPSLWRANFFRIERPRDGEPEFSCWSPTYTTPADFHKPSCFGYLMLAE
>NC_009523.1|WP_011958933.1|5336116_5336899_+|SDR-family-oxidoreductase
MQRLKDKVALITGAARGIGRGIALCMAEEGADVVLNDLPPDAPGVVDARATAADIEAIGRRALVVYGDVADRDAVDQVFAAAIEQFGRVDIAVANAAFSIRELVVEAQWEHVLRTIEVTQFGVFHTCQAAARHMVARGGPGKIIIIGSILAQIPLPTSAAYNMAKAAVNHLASTMAAELAPYRINVNVINPGHIDTPGERKFATEEELQRAAQQIPWGRLGTPHDIGRAAVFLASDDADYITGSALCVDGGYRVGMRLYG
>NC_009523.1|WP_011958934.1|5336929_5338117_-|amidohydrolase/deacetylase-family-metallohydrolase
MYDLLIRGGHVIDPANHRNAPFDVAISGGRIAAVAESIDPAQARAVIDATGQIVTPGLVDLHTHVYWGVTYWGIEADPVAARSGVTTWVDAGSAGAYSFPGFRHFICNASRVRIFAFLNLSAIGLIAPTWEFANLDYCDIDLAARTIEENRDMLVGIKARIDHNTTRGVGIRPLELARTLADRVALPLMVHIGNAPPALDEIVALLRPGDILTHCFTGGTHRLLTDDGRLSPVARTLQERGVLLDIGHGTGSFSYRVAEAALAEGLLPDIISSDIHQLSVQGPMFDLPTTLSKFLNLGMSLPDIIDRATRRPALAIGKPELGTLQPGVPADVALFRLEEADVTFYDVEMNPRAGNRRLVCTMTIVDGQVLPQRAERAPAIWAILPEHQRRILDQG

Crispr_ID: NC_009523_102

• CRISPR_ID: NC_009523_102
• CRISPR_location: 5409680-5409788
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_102

Consensus_repeat	Method
GGAGAAGGGGGAGTTTAGGCATCCTGATGCCTGAAAC	CRISPRCasFinder

spacers of NC_009523_102

>102.1|5409717|35|NC_009523|CRISPRCasFinder
CAACGCACCGAGGTTGCTAACTTTGCGGTTCTTCA

CRISPR arrays and Neighbor proteins around NC_009523_102

CRISPR arrays

The CRISPR arrays of NC_009523_102

>merge|NC_009523|102|5409680-5409788|CRISPRCasFinder
GGAGAAGGGGGAGTTTAGGCATCCTGATGCCTGAAACCAACGCACCGAGGTTGCTAACTTTGCGGTTCTTCAGGAGAAGGGGGAGTTTAGGCATCCTGATGCCTGAAAC

>NC_009523|102|96|5409680-5409788|CRISPRCasFinder
GGAGAAGGGGGAGTTTAGGCATCCTGATGCCTGAAAC	CAACGCACCGAGGTTGCTAACTTTGCGGTTCTTCA
GGAGAAGGGGGAGTTTAGGCATCCTGATGCCTGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011958980.1|5403314_5406848_-|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl|CDD|223911
NC_009523.1|WP_011958985.1|5411386_5412742_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|225212
NC_009523.1|WP_011958984.1|5410946_5411324_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379267
NC_009523.1|WP_011958990.1|5416640_5417135_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958981.1|5407086_5407695_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_009523.1|WP_011958987.1|5413178_5414855_-|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173843
NC_009523.1|WP_011958972.1|5390744_5393360_-|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl|CDD|274529
NC_009523.1|WP_011958978.1|5399693_5401577_-|molecular-chaperone-HtpG	unknown	unknown	gnl|CDD|235366
NC_009523.1|WP_011958991.1|5417206_5418259_-|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|238198
NC_009523.1|WP_011958973.1|5394156_5394552_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958986.1|5412763_5413033_+|DUF3006-domain-containing-protein	unknown	unknown	gnl|CDD|378598
NC_009523.1|WP_011958992.1|5418378_5419014_-|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NC_009523.1|WP_011958982.1|5408016_5409258_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|224423
NC_009523.1|WP_041334329.1|5397059_5399627_+|hypothetical-protein	unknown	unknown	gnl|CDD|274709
NC_009523.1|WP_011958988.1|5414895_5415339_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958974.1|5394666_5394882_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041194.1|5410375_5410579_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958989.1|5415726_5416644_+|radical-SAM-protein	unknown	unknown	gnl|CDD|224232
NC_009523.1|WP_011958979.1|5401789_5403223_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NC_009523.1|WP_011958975.1|5395995_5396556_-|deaminase-reductase	unknown	unknown	gnl|CDD|334719

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011958980.1|5403314_5406848_-|efflux-RND-transporter-permease-subunit	gnl|CDD|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NC_009523.1|WP_011958985.1|5411386_5412742_+|MBL-fold-metallo-hydrolase	gnl|CDD|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	7.62426e-89
NC_009523.1|WP_011958984.1|5410946_5411324_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379267	pfam13565, HTH_32, Homeodomain-like domain.	1.89505e-08
NC_009523.1|WP_011958981.1|5407086_5407695_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.87258e-16
NC_009523.1|WP_011958987.1|5413178_5414855_-|acyl-CoA-dehydrogenase	gnl|CDD|173843	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product. AidB is one of several genes involved in the SOS adaptive response to DNA alkylation damage, whose expression is activated by the Ada protein. Its function has not been entirely elucidated; however, it is similar in sequence and function to acyl-CoA dehydrogenases. It has been proposed that aidB directly destroys DNA alkylating agents such as nitrosoguanidines (nitrosated amides) or their reaction intermediates.	1.39193e-126
NC_009523.1|WP_011958972.1|5390744_5393360_-|ATP-dependent-chaperone-ClpB	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NC_009523.1|WP_011958978.1|5399693_5401577_-|molecular-chaperone-HtpG	gnl|CDD|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NC_009523.1|WP_011958982.1|5408016_5409258_+|alpha/beta-fold-hydrolase	gnl|CDD|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	1.43026e-08
NC_009523.1|WP_011958986.1|5412763_5413033_+|DUF3006-domain-containing-protein	gnl|CDD|378598	pfam11213, DUF3006, Protein of unknown function (DUF3006). This family of proteins has no known function.	8.53219e-20
NC_009523.1|WP_011958991.1|5417206_5418259_-|molybdopterin-dependent-oxidoreductase	gnl|CDD|238198	cd00321, SO_family_Moco, Sulfite oxidase (SO) family, molybdopterin binding domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). SO catalyzes the terminal reaction in the oxidative degradation of the sulfur-containing amino acids cysteine and methionine. Assimilatory NRs catalyze the reduction of nitrate to nitrite which is subsequently converted to NH4+ by nitrite reductase. Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate.	2.05265e-32
NC_009523.1|WP_041334329.1|5397059_5399627_+|hypothetical-protein	gnl|CDD|274709	TIGR03663, TIGR03663, TIGR03663 family protein. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.	2.11301e-06
NC_009523.1|WP_011958992.1|5418378_5419014_-|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	1.16783e-86
NC_009523.1|WP_011958989.1|5415726_5416644_+|radical-SAM-protein	gnl|CDD|224232	COG1313, PflX, Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins [General function prediction only].	3.66207e-118
NC_009523.1|WP_011958979.1|5401789_5403223_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.22962e-23
NC_009523.1|WP_011958975.1|5395995_5396556_-|deaminase-reductase	gnl|CDD|334719	pfam01872, RibD_C, RibD C-terminal domain. The function of this domain is not known, but it is thought to be involved in riboflavin biosynthesis. This domain is found in the C-terminus of RibD/RibG, in combination with pfam00383, as well as in isolation in some archaebacterial proteins. This family appears to be related to pfam00186.	2.53298e-09

Protein sequences

>NC_009523.1|WP_011958982.1|5408016_5409258_+|alpha/beta-fold-hydrolase
MQEQDVILKRQKYNTRFKNGDMDFMFNWALGVSQIVGMSPSQVFYAVHDIRDGDPDGWRDGFWRQGDYQVERAREFLKHGQQLAAGQLHLGAAYAYRSALQYTHPSASDFNTRVQTMERAFQQGVHLIGIPMRPIEIPFEHAALPGYYLEHDEQSRPVVMMVGGGDTFREDLFYFAGYPGWKRGYNVVMVDLPGQGVTPDRGLHFRADMERPISAVLDWLEAHSAARPTQIAIYGVSGGGYTTALAVSSDPRISAWIASTPIFDLVEVFRREFGSAMKAPGWVINTFMRLAGMLNKSAEINLDKYAWQFGATDFKSVVDGVVALAKRVDYTGIATPSLFLMSEGEGDELKRQTLEIYHDLRRRGVDVTLCEFTAAEGADGHCQVNNLRLAHLVIFDWLDRVFGHTPGDRRLWV
>NC_009523.1|WP_011958981.1|5407086_5407695_+|TetR/AcrR-family-transcriptional-regulator
MTLTLRERQKQALREEIMNAAQELVAEKGYGAMSMDELAARVGISKPTLYAHFANKDELVIEAATREMKQMIALIESQADRSPMDQLCFIMRQILQRQVQMHTLGIGPWPEIFRLLCAHDEALGYMQRIGGDIVALVQQGIAEGEIDPALDPEAVVRAFFGLASALHKWYVAAPGPGDPQRAADSLVEIFMRGVRRSHDSAE
>NC_009523.1|WP_011958980.1|5403314_5406848_-|efflux-RND-transporter-permease-subunit
MAIQRREEKLNGMPISDTSIRQPVFVTMLMLLTIVFGILAFRSLPVNLLPDFEVPVIAVTVPYPGAGPESVADQVAKPIEDAVNTIEGIENITTNASEGVALILLEFKEGTDVNRAEQDVREKVNAIRPTLPRDVRDPIFQKFDPNAVPIVSFAIASTQNLSPLEVRRIVDNDIAPIIQRAEGVGSVQVSGGLQRQINVLMDLEKLRAYGILPVQITRSLQQANVNLGLGTINAGAQEINLRAPSLLQTPDDIARIQITGTPYRIGDVATIEDGVAEKKSFTRLNGVEAIIIDVRKQSGANTVAVADNAKAALERALGARSDLTYIVPRDASEAVRQSTISSLEELIYASVAALLVVMMFFSGVRNMLVTAAAPAAIALVGLVILPAIGIPVDKVLVLAIAIGLLVVLTFIRDRNTLVTMAGLPIILMGTFALMPLFGLSINLITLLALALCVGLVIDDAIVVRENIFRHTQRGETPRVAASKGTAEVALSVVAMTLTVVAVFVPVTFTSGTTGIIFKSFGITIAVAILLSLVEAFMFAPMLSANLFRRQKVQPHPHDEAHSHTGDVGRAARHLRGIDPNQADAGLLHEAEEDPGPLGRFYERILSWSLSSLRNRLIVIATAVIVLVLSVVVASGLKFSFFPQQDAGEFLVGFELPPGTALVETDRLARQAEEVLLADPDVESVISTVGFSGAPERAEFFVRLKDEVPTRAAEERLRPQLAFLPNLTFGLPSIGVPTSTGVTGRQLQLSLQTTEPVQNLAPLIEQIKAEMAAIPGVVDIDTSYRPGKPELRFVADPERIGDLGITNDEIAASVRALVNGDRATVLRQAGQDVDIVVRLRPEDRATPAALQNIAIPTRSGAVPLTSLGTIELASTPQTIRRYNKLNQVIIGANLQGRNLGEVQAELQQRLDAKGLIPPTVFAEFTGLAQQQTEGFESLLLAMLLSVIFVYMVLASQFGSFTQPLVIMVAMPFSFIGAFLALRLINIDLDITGMIGLIMLLGLVVKNSILLVDFTNRLRRAGLDKHAALELAGAIRLRPILMTTLSLVAGALPVAMGIHLVGTGEGGEFRKGLATVLIGGLMTSMLLTLLVVPTAYSLMESFTERVSTWFRRRFDPEGWAEEQAALAAESMVPVNGSAPAVALAVPNGGSVIAPPNHAAAGEPNGHEPVSSPPVRAEEQ
>NC_009523.1|WP_011958979.1|5401789_5403223_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKRDRVITGVVAGLTALVLAACGAQSAAPSPTVGAPTAVAPTVPVPTLVPLPTSQPIQLGVTGIGEVKSAQDANLSFQVQGTVAQVFVKEGDIVKKGDLLAILDTRAFDQQLEQAKAALANALAQEAALTEAPRQVDLNAARAAVAQAQAALEALQRGPKEQDIRMAEAALAAAEANLQATRDRLSFAKTQAEIQMEQAAAALTQAQARYAQAKYNWEYARDTGNDPIVPEVAAPNGQRVPNKLSDGQRENYYAQFVQAEAGLRQAEKALELAVKGAESARQAEVTGIRAAEAQVEQARLTLEKLRLPPDPDRLAAARAALAQARAQEARIVPDPRESQKAAARAAVEQAQAALTLAQINRERAELRAPFDGVISIVSIDPGDPSVTQGLPAIQIIDMSSLYVDVQISDTDIVRVREGQSAKVTVSSIPDREYTGKVEFIAPTATVQGLSRSYRVRIALDDITGLRAGMSARVDILE
>NC_009523.1|WP_011958978.1|5399693_5401577_-|molecular-chaperone-HtpG
MTAETEATTHAPTAVPFRAEVRQLLNILAHSLYTDREIFLRELISNASDALHRVQFEMVTNQQVRDPDADLEIRISVDKDAKTITISDTGIGMTREELIENLGTIAHSGTRALIEHLEEAQRSNIIGQFGVGFYSAFVVADEVTVISLSYRPDAEAALWRSRGGESFVIDAAERAQRGTTIILKLKEEAHEFADEWRLRQIVRRHSNYVAFPIYIGNERVNESTALWRQQPRNVEQSQYNEFYRQMTFDYEDPLLAVHFSSEAPLDLHAILFVPAKRERGLIERRMEGKIRLYSRKVLIQEDAKDVLPPYFRFVEGVVDSEDLPLNVSREGVQRDVGPNRDPVLQRIKKSLTNRLTKELVELAEKDAQKYATFWNEFSPFIKEGIATDPLARDDLLPLLRFHTTRSGDQLASLAEYKERMVEGQKEIYYVLAADLESARRSPHLDALTDRGIEALLLYDVMDSFMLNGLREYQGLKLRNVDDPNLSLPGEAPAPEVSISDEQFTRLVNAFKETLGDRVVSVRASNVLRHNPLRLVSPEDQQYNREMARVQRILDRDFKVPPKIVELNRGHPLIVDLARLVESGNDATLVRHLIEQMYDSALLLEGLHPNPADMVGRIQALMEAAARR
>NC_009523.1|WP_041334329.1|5397059_5399627_+|hypothetical-protein
MRWLHMQHARDAAPVAPGSVVPLALVILSLVLGARLARLDQHLTVDDPDARRVLVGFYDVERNPTDLFRWSRPEAALFLFGFDGRPAQVMLRFAAPRGDADPPVLSVSMRGRAVGTFSVAPGWRRYYLLTPTDPAGDTPLLLRTAAYRPPGDGRDLGVVLAEFAALPSNDAVWFPPPVRAIFLASFPVLGWLALLWRAPRQALERQLLRWSVVVFLALLAGAAAAFPRVSGYWLPTIGWPWWPLLPLMLVVAWQPMRPLVIHSVARLRSLGVPALWGGAGLTLALVVALRLGLPPVIGMSGVAAAVTLAVVASGAYAATAASGERFAYRTEALALVAITVVALVLRLYRLDDLPAGMWRDEARHGMQALRIWNDPTYRPVYVVAGADLPALLFYLMAPVLAITGPGAGSARLVSALAGAFMPLALWWAARPILGARAAVYGAAFLAWASWGLSMSRWAFPATLDHLLELAAIGTMWRALGQPTRWRMMAGMALAGALAALAAYAYHTGRLAPLVFALLTALHLGRDTRAWRRALPGLAAAAVAGMIVLLPLLWFIAGDFEGYNRRTGAVAIANSQSLEKRTIALVLDNVARYLGMWHIAGDPNGRHHAPGAPMLDPLAGACFAVGVGLAVARWRTRACIPLVWLALALIPGIFSTNAPHAMRSLGALAPSCMLAGMALDALVVSVRNATSVRWRQVVPATVAGTLALSLGFNVWLYFVHMPRNPAVYHEFDLTETAVGRLVRAAALADDPRLRAVHVFLDRRLTAQDTVRFLTFDVTVGAFDGVRLSGTVDGDALLILPPDASDDERAAALATLGPAARELEAPLLPNGEAPLFLAYGVGDGASRLLAETFPARR
>NC_009523.1|WP_011958975.1|5395995_5396556_-|deaminase-reductase
MGLLTFSLNVTLDGCVDHREGIVDDETHAFFTRLMDEAGAMLWGRVTYEMMESYWPLVARGNVEAPPAMRDWAVKLEAKPKYVVSSTRTNFPWTNSHHIAGDLRTSIQKLKDATPASVLLGSSKLATELDQLDLIDEYKFLVHPRIAGRGPTLYQSGLSSTRRLELVSAKPLRNGAVAMHYRRARG
>NC_009523.1|WP_011958974.1|5394666_5394882_-|hypothetical-protein
MNAYRVETTAPPDGSLAIRHLPLQAGESVEVIMLVRPLLTAITRRYPLRGTPITYRAPTEPIAASDWEATQ
>NC_009523.1|WP_011958973.1|5394156_5394552_-|hypothetical-protein
MALQERRLIQQHTDTLLPQVQADLKQACGGDIEVSVEWDGFESDMAALERLPSQCFDRLVTAIGWVCKEEIGKAAMREKVRQVVVRNVRTAAERNLALSDGILTVAGVWASTEWDGLYHQNEYHRFFESHL
>NC_009523.1|WP_011958972.1|5390744_5393360_-|ATP-dependent-chaperone-ClpB
MTFNTNRLTQKSEEALLAAQSTAERNGNSQVEPEHLLLALLEQTDGVVPQVLARLNVAVGVLVQQVRAEINKFPRISGAGVQLQYSPRMRNVVVRAADEMPQFGDEYISTEHLLLSILQHAGGGAERILRQAGITRDKLLQALREVRGSQRVTSPTPEGTYAALEQYGRDLTELARRGKLDPVIGRDEEIRRVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVREDVPEALKNKRIIALDMGALIAGAKYRGEFEERLKAVLKEIQERDDIILFVDELHTVVGAGAAEGAMDASNMLKPMLARGELHMVGATTLDEYRKHIEKDAALERRFQPVMVDPPSVEDTISILRGLKERYETHHGVRITDAAIVAAAVLSDRYISDRFLPDKAIDLIDEAAARLRMEITSDPQELDDLKRRIMQLEIEREALKKEKDKASKERLEKLEQELANLQEQRRAVEAQLQREREQLARVQQLKEQIDQTRIEIERAQRVYDYNKAAELQYGRLNTLERQLAEIEEHMRASGSAMLRQEVTEQDIAEIVSKWTGIPVSRLLEGEIEKLVHMEERLHRRVVGQDEAVSAVANAVRRARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEFLFDDEQAMIRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHHDVFNILLQILDDGRLTDGHGRVVNFKNTVIIMTSNIASPTIQELAQRGASQEIIRASVMEELRAQLRPEFLNRIDEIIVFRPLSRDQIGKIVDIQLNRLRKLLADRKITLDLSPAAREKLVAEGYDPVFGARPLKRVIQQRIQNPLALRLLQGEFRDGDTILIDVASDGSFTFERVVVGEVVTP
>NC_009523.1|WP_157041194.1|5410375_5410579_-|hypothetical-protein
MTLPNKAQQLMIYRLPLSTRDSKALLDASRGGRLIAFGSLEKSSTAHLIFAVQEALSLGERDTFALF
>NC_009523.1|WP_011958984.1|5410946_5411324_+|helix-turn-helix-domain-containing-protein
MPRPKAYVVTLTETERLSLLDLLKKGEVKARMVTRARILLRSAEGATDQSRADVLKVNPQTVRNIRKRFVEEGLEAAVQERPRPGAQPKLDSKQEAFLIALACSAPLTVWWRYSCAACVDVIVDS
>NC_009523.1|WP_011958985.1|5411386_5412742_+|MBL-fold-metallo-hydrolase
MCQSSTCPHCGKPLRLSAKFCGMCGKPLSRRAQSPISTLKHRSRFLGGKILPGLISLALICFALTIINPVRQSLLAVIGWDESDALPIITATATMTTFDVRETNDSLLTPTVAVAPPSPTTHVVAESSDKSLLEVHVIDVGQGDSILIRTPEGKTALIDGGYDNGRALAYLQAEGVTHVDVMVASHPHADHIGGLVEVLTALSVGEVWTSGATHTTGTYERFLDAIIAAKVPYHEARRGDVIPLGSLNLNVLHSDPNASELNNTSVVLRLAYGRISFLFTGDAEHAAEYEMLATVRDQLSATVLKVAHHGSYTSSSPEFLAAVQPAVAIYSAGRNNNYGHPHAETIQALQRIGATIYGTAEHGTIVITTDGKNYHVQTEYDRPTIQVPPTDNWQDSISLIPGSNISIADKDCSDFSTQAEAQAFFLANGGPDRDPHRLDGDNDGIACERLP
>NC_009523.1|WP_011958986.1|5412763_5413033_+|DUF3006-domain-containing-protein
MGESSHEPAVIDRFEGEYAVILVGEMQRPYDIPRHRLPPAAREGDWLRIERIDNQIITVQLDPEATAAARQRILSKLERLRKGEHLRDA
>NC_009523.1|WP_011958987.1|5413178_5414855_-|acyl-CoA-dehydrogenase
MIELFHQQPPSLGNQYTDDRVLRSFLRRALPRDVLAQVEPDLTTMGELAGGELYRLHLADRLNEPVLTQWDAWGERIDHIEVSPLWKRAARLAAEYGLVALPYERTYGVFSRIVQFALVYLFHPSTDVYTCPLAMSDGAARTLVEAGDATLIDRALPRLISRDPDRCWTSGQWMTELPGGSDVSRTETIARPGFDGVWRLFGRKWFTSATTGQMALALARPDGNPPGSRGLALFYIELRDDEGRLQGIRVNRLKDKLGTRKVPTAELSLEGTPARLVGAPNGGVRAIVPMLQVTRIWNSVSAASFMRRGIALARDYARRRVAFDAPLNRQPLHTETLATLQAEFEGAFHLSFLTAGLLGAEETGVADERQRHLLRVLTSITKLTTGRQAVDVMSEVIEAFGGAGYVEDTGLPTLLRDAHVLPIWEGTTNVLALDTLRALAQPGTWEAILSLADELMAGVNDASLARASVHARTALDHARRWFGEARDRARLERGARRLALTIGRSLELALLISHATWSLTEEHDGRTRAAALRFARTPIDLIDDDDCDDTALADDMPM
>NC_009523.1|WP_011958988.1|5414895_5415339_-|hypothetical-protein
MSTTVLQTMWVHGHSLQIEDHDALVSHWRSGFCLYVEGKPDSLNWLHASIPTPGSAGDRPRRIGAVMITGCTMSNDAIVRDIHVYDGDIKIGDINDVNLSGDIGMVRFTLLDHPEVHTAIGISLGLSFGAAPLPHGISITAVGAEFV
>NC_009523.1|WP_011958989.1|5415726_5416644_+|radical-SAM-protein
MSYPAYLDLYDQGVLHERAAIAHERLASCTLCPLACRADRLHDEAGECRVGREAVVASFGPHFGEEDVLRGWRGSGTVFFSGCNLRCVYCQNYDISQFVSGHAVDAAHLADIFLDIQRDGCHNLNLVTPTHVIAQILEALTIAIPRGLRLPIVYNTSGYDSVAALRLLDGVVDIYMPDVKYSDSAIGQQYSGIPHYWEVVRPALREMHRQVGDLRVERGLAVRGLLIRHLVLPGRLAGSQEVLRFIAEEISRDSWINLMDQYHPAYRAFGYPELTRRLTPNEYAEVVACARSLGLHRGIPLDTTR
>NC_009523.1|WP_011958990.1|5416640_5417135_+|hypothetical-protein
MSSDSYDILRRAVVEALGPRATPERRRQIAAELRALAEQQERMAQRAEDQPTPGESARRTDRAAGMYIRIRHEPDPHTGTRRIRLLFGKQVWFDLGSPQRIVIQRVGAEIWIVASKGEGGLRVETDVGLPGCIVPDGTPLDRLAPGRYAATLRAGALVVGARSG
>NC_009523.1|WP_011958991.1|5417206_5418259_-|molybdopterin-dependent-oxidoreductase
MRPRATDWSLALATGAAFATGLWTLTVGRPEGWWVFALHGATGYLVLLLLFPKLARVSGRLLPGMRDPRAWAGLTTTLLAVLTILCGIAWIGGGDLVILGYNLLNWHILLGIVLTVALSAHMVIRARPLRPTDRTRRQALRAGAFALGAALIWPLQERLIGGLGMAGAQRRFTGSREVGSFSGNAFPVVSWMADRPAPLDVATWRLRVAGLVAAPYAATRDELDVRDELIATLDCTGGFYTTQRWSGVRVGALLDRAGILPETRWVRFVSITGYRWSLPLAQAREALIAVRVGDELLSHGHGAPARLVAPGERGFVWVKWLTLIEARAEPDPGQLLAINISGFIDDPEHT
>NC_009523.1|WP_011958992.1|5418378_5419014_-|dephospho-CoA-kinase
MPYKGLYLIGLTGNIACGKSTVLAMLQERGAAVIDADQVTRQVQQPGEPVYQAIIEAFGEAILVAPGGPIDRQRLGAVVFSDPQALRRLEQIVHPAVHARILAWLDEVAAHAQVAVIDAVKLLEAGWKQVCDAIWVVTCTPEQQLRRLIETRGMSEAEARMRIAAQPSQESRAAQADVVIDNSGSLDATRAQVNAAWERIPIDRRTGRGSQ

Crispr_ID: NC_009523_103

• CRISPR_ID: NC_009523_103
• CRISPR_location: 5434247-5441685
• CRISPR_type: TypeI
• Repeat_type: NA
• Spacer_info: 110 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5,cas3

Consensus repeat of NC_009523_103

Consensus_repeat	Method
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	PILER-CR
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CRISPRCasFinder
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CRT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	PILER-CR

spacers of NC_009523_103

>103.1|5434280|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTTGTAGCGGCTTCGCTGTAATAGCCCCACAGGCC
>103.2|5434348|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTTATCGCTGGTACGCTTCACTCACAATTTACTACA
>103.3|5434417|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CAAGTGTTGCCGCGCTACGCGCCGTCATCAGACGG
>103.4|5434485|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCTGGTCGAATGCGAGACGCTCGCGTTCGACATC
>103.5|5434553|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTGATGACGCGCTATCAACTCCAACTCCACGCGTGG
>103.6|5434622|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCCCTTCACGCTCAACGAAGGTGTCGGCAAACCA
>103.7|5434689|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TGCGATATACTTTTCGTTTGCGTCGTTTGAGGACGC
>103.8|5434758|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TGTCCTTCGGTTTCAATGTAAGCGTCGGCGAACC
>103.9|5434825|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGAGGCGCACTTCGGTATTGTTCGCGCGTCGGAC
>103.10|5434892|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GAGGCGCACTTTCAGCGAAGGGCGGTTATTCGTACT
>103.11|5434961|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTTGGCGTCGATGTTGATCCTGATATAACGACT
>103.12|5435027|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCTATAGCGTGTTGTGACAGCGCCGAACAAACAG
>103.13|5435094|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCGAGCGGGTTGCGGATGCGTCCCAGTTGCTGGCG
>103.14|5435162|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCGGCGTAAACGCTGCGGCGTTGATGTCGAGTGC
>103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CCGGTCTCTACAACGTGCTGCTGGCGGTTGA
>103.16|5435293|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AAGCGCTGTGGCGCGGCATACGCGCGTCGGCGGA
>103.17|5435360|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTCGCTGGCTGCGCACGCGGCGCGGGGCGTTGCG
>103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CCGGCGCCCCGGTGTCGGCATGCACGCCGTACA
>103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTCGCACCCGCTCACGATCCGGCGCGCCTGCCA
>103.20|5435559|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTTGTCCCGCCCTTCCGGTGAGGCGTATGTGGGCG
>103.21|5435627|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ACACGCGGCGGACGCCTATGTTGCCGCAGCAACG
>103.22|5435694|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGGGATTGTCCGCTGATCATCGATGAGGTGCA
>103.23|5435760|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGAGTCGCTACATCGCGGTGTTCAACGGCATAAT
>103.24|5435827|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGGCGCGGTGTCGGGGCGGATCGACGCGCTGCTGGTC
>103.25|5435897|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCTGGCGGCGCGGTGGGCGTATGTAATGGCGTAT
>103.26|5435964|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
AATTCCGCCGGTGGCGGATGTCGGGCTGATCGCTT
>103.27|5436032|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TTCTCCTCCTACTTGATGATGATCCGATAATTCC
>103.28|5436099|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TGTTGCGCCGCATCGCCGGATACAGCGCTTCGTT
>103.29|5436166|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTGCGCGCGGCGGGGGAGTTCGTGATCTACGACCT
>103.30|5436234|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ATACGCCAGCTCAACATCAACAGCGTCGCCGTCGCC
>103.31|5436303|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTCGTCCATCTCAGCGCCGCGCAGTCGCGCTGC
>103.32|5436369|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGGCTGGTCGGTGCGCGACGGGCGGCTGGTCTAC
>103.33|5436436|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ATAATCGTCGTCGGGTACGTATCGGAGCGCACA
>103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
>103.35|5436568|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
>103.36|5436637|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
>103.37|5436704|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
>103.38|5436771|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCGAGTCGCTACATCGCGGTGTTCAACGGTATAAT
>103.39|5436839|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGGCGTCGGGGATGACGACGCGCCCGTCGTCATC
>103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GAAGACTTTGTACTTGCTGGTGTCGTCGCCGGGCA
>103.41|5436974|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGACCGCCCGGCGTCCTCGTTGTCCAACGACCA
>103.42|5437040|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TGCGGTGAGTGAGGAACCGACAGACGACGCGGC
>103.43|5437106|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGGGGAGGTCAGTGATAGGAGGAAGATGATGGAA
>103.44|5437173|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGTTGTCAGCAGTGTCACAACACTCTATAGAAATA
>103.45|5437241|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ACTGCGCTGCCGCAACCAGCGCTTCAATTGCGGCTT
>103.46|5437310|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGGATACGGCAGATCGGGACGCTTGTTTTCGACGC
>103.47|5437378|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GTCACATCAGGGTCGACATCGATGCCGAGGAGAG
>103.48|5437445|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCAGCGCTATACGGTGTGTCTGTGATGACGGAC
>103.49|5437511|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCAGCAGTTCTTGGTCTGCCGCGTCCTCGAC
>103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
>103.51|5437642|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
>103.52|5437711|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
>103.53|5437778|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
>103.54|5437845|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTTCGGCACAATCGCCTTACCCCGCAGTATACTCCA
>103.55|5437914|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCAGCGCGGGTTCCGACCAGTGCTCCAAAAGAT
>103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCCATCTCGACATCAACCGCATCGCCGTCGCC
>103.57|5438047|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GAAACCCCACCGACGCTGGCGGGGTTCCGGGGAGG
>103.58|5438115|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCCAACTCGTTGAGTAACCACTCCAGCGCGGGGA
>103.59|5438182|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CCCGGACGCGCGAATACTGAAGATTACGTCGGAGA
>103.60|5438250|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TCCGGGATTTGCCGTTGAGGTGAAAGCGAGGAA
>103.61|5438316|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GCGGATCGAGGAAGGCGCGGAGATCGCAATCACC
>103.62|5438383|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCACCGATAGTCCGCTGACGTGGCGCTTCCCCG
>103.63|5438450|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CTGGAGGGGTATATCGCCGAGGCGGTCGCTTGGG
>103.64|5438517|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TGTTTGTCAGCAGTGTCACAACACTGCATAGAAAAA
>103.65|5438586|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGAGACGGTCGTACAACTGTTGGCAAAAGCGCTA
>103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGGTGATGTCCGGCGCGGCGCCGGCGGCTATGCTG
>103.67|5438721|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCCGCCCGTCCGGTGACGCGCCGCAGTCCCAAA
>103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGGACAGGGCGGCAGCGGCGCCGTCCTGCTTGTG
>103.69|5438855|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
GGCGACGCGCAGCGCGTAAGCGCGGCGGATCGCCG
>103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CCGGGGACCCCGTGCGCTGCGGCGCGGCGCTGG
>103.71|5438989|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGTGCTGCTCCGCGCCGCGCAGGCGTCAACGCGCG
>103.72|5439057|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CCGAGGAGTGGCGCCATGTCGCCGCCGCCATCGAC
>103.73|5439125|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
ATGCGATGCACCGTGGTTCATCGGCGCCGTGCAC
>103.74|5439192|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
CGCGGTGCAGCCGGAACTGCTCCAGCGTGCAGCG
>103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT
TACTCGATCCGTCGGCGCGCCTGGCGGATTGCTC
>103.76|5439326|2327|NC_009523|PILER-CR
GCGAAGTACCGCTATTTGGCGCAGATCGCGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCTGCTGGTCAACCGCGACACCGGCGAGATGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCAATGCGCGCCAGTTCAAACGCCAGCACTTCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCGGCGGTATATGCAGCGCTGCCCGCCCGCAGTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCCGGCAGCAGCGTCGGTGCAACGACGCCCGCGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCGCAGCCCGCAGTACTCTATCGCTGCGGTCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCAGCGGCGCTAACCCCTCGGTCAGCCCGCGCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCGGCGCTGATCGGCGATGCGATCCACGCGCATCTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAGCCGGTTCACCAGGTCAAAGATTGCCGTTTGCGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGGAGACCGAGTGTACCTACTGAAGCTTCGTCAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGAGCGGTTGTCGCTGTTGTATCTTTACTCCAAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGCCGGAATGATATACCCCTCAACCGGCGTCTGCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCGCGCTCAGCAGCAGCACCGCCAGCGTTGCGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGGCGGCGGCGTACCGATTTGGCGCGTCTGTTGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCTCATCCGCCATCTTGCGCAAGTACTCCAGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTAGCGGGTTGCGCGTACAACGTATACGTATCAGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTCAGACGCCGATATGATTCCCAGTGTGTACGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGTACGAGTCGCACACCTGGGATGGTTCACGATGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGACGCATCCCGGATGCGTTGAGTATGGGATGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTTGAACGCGCCGAATCAGTTCGGATTACGCGCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGCAGGGGGGTTGAACGCATTGCGTCATACGCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAGTACGGAGTTTTCCGACTCGGTCGGGAGTCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTAACCGTATCTCGGTGTTGTTCGCGCGCCGGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCCCTATCAACTGTCCTTCATACTCGCGCCAGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACCAACACGACGACGTGGTTCGCAATGACCGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACAGACCCCGACATACCAACCGAGATGAGGACGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGAGGTGACGGATGTACGCGACGCTGGCGCAGTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACAGCGTACTACGTCTACAGGACGGAGAGTGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTACGGACACATCTTCCGGTTCCGCAACCTTGAGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTATGCCGAGGGGAGGAAGGTAATCTACGAGTAT
>103.77|5439326|33|NC_009523|CRISPRCasFinder,CRT
GCGAAGTACCGCTATTTGGCGCAGATCGCGCCG
>103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT
GCTGCTGGTCAACCGCGACACCGGCGAGATGGAA
>103.79|5439459|35|NC_009523|CRISPRCasFinder,CRT
CCAATGCGCGCCAGTTCAAACGCCAGCACTTCGAT
>103.80|5439527|35|NC_009523|CRISPRCasFinder,CRT
CGCGGCGGTATATGCAGCGCTGCCCGCCCGCAGTC
>103.81|5439595|36|NC_009523|CRISPRCasFinder,CRT
CGCCGGCAGCAGCGTCGGTGCAACGACGCCCGCGAC
>103.82|5439664|34|NC_009523|CRISPRCasFinder,CRT
ATGCGCAGCCCGCAGTACTCTATCGCTGCGGTCG
>103.83|5439731|35|NC_009523|CRISPRCasFinder,CRT
CGGCAGCGGCGCTAACCCCTCGGTCAGCCCGCGCA
>103.84|5439799|36|NC_009523|CRISPRCasFinder,CRT
TCGGCGCTGATCGGCGATGCGATCCACGCGCATCTC
>103.85|5439868|36|NC_009523|CRISPRCasFinder,CRT
CAGCCGGTTCACCAGGTCAAAGATTGCCGTTTGCGC
>103.86|5439937|35|NC_009523|CRISPRCasFinder,CRT
CCGGAGACCGAGTGTACCTACTGAAGCTTCGTCAA
>103.87|5440005|34|NC_009523|CRISPRCasFinder,CRT
CGAGCGGTTGTCGCTGTTGTATCTTTACTCCAAA
>103.88|5440072|36|NC_009523|CRISPRCasFinder,CRT
CCGCCGGAATGATATACCCCTCAACCGGCGTCTGCT
>103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT
CGGCGCGCTCAGCAGCAGCACCGCCAGCGTTGCGA
>103.90|5440209|34|NC_009523|CRISPRCasFinder,CRT
GGCGGCGGCGTACCGATTTGGCGCGTCTGTTGGA
>103.91|5440276|34|NC_009523|CRISPRCasFinder,CRT
GCTCATCCGCCATCTTGCGCAAGTACTCCAGGAA
>103.92|5440343|35|NC_009523|CRISPRCasFinder,CRT
CTAGCGGGTTGCGCGTACAACGTATACGTATCAGG
>103.93|5440411|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR
TTCAGACGCCGATATGATTCCCAGTGTGTACGA
>103.94|5440477|35|NC_009523|CRISPRCasFinder,CRT,PILER-CR
GTGTACGAGTCGCACACCTGGGATGGTTCACGATG
>103.95|5440545|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CGGACGCATCCCGGATGCGTTGAGTATGGGATG
>103.96|5440611|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CTTGAACGCGCCGAATCAGTTCGGATTACGCGCT
>103.97|5440678|36|NC_009523|CRISPRCasFinder,CRT,PILER-CR
GTGCAGGGGGGTTGAACGCATTGCGTCATACGCGAT
>103.98|5440747|36|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGT
>103.99|5440816|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR
TCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGG
>103.100|5440883|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CAGTACGGAGTTTTCCGACTCGGTCGGGAGTCG
>103.101|5440949|35|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCG
>103.102|5441017|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CTAACCGTATCTCGGTGTTGTTCGCGCGCCGGAT
>103.103|5441084|35|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTT
>103.104|5441152|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR
TCCCTATCAACTGTCCTTCATACTCGCGCCAGAC
>103.105|5441219|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ACCAACACGACGACGTGGTTCGCAATGACCGAA
>103.106|5441285|35|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ACAGACCCCGACATACCAACCGAGATGAGGACGCG
>103.107|5441353|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR
GCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGC
>103.108|5441419|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR
TGAGGTGACGGATGTACGCGACGCTGGCGCAGTT
>103.109|5441486|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR
ACAGCGTACTACGTCTACAGGACGGAGAGTGGA
>103.110|5441552|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CTACGGACACATCTTCCGGTTCCGCAACCTTGAG
>103.111|5441619|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR
CTATGCCGAGGGGAGGAAGGTAATCTACGAGTAT

CRISPR arrays and Neighbor proteins around NC_009523_103

CRISPR arrays

The CRISPR arrays of NC_009523_103

>merge|NC_009523|103|5434247-5441685|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTTGTAGCGGCTTCGCTGTAATAGCCCCACAGGCCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTTATCGCTGGTACGCTTCACTCACAATTTACTACAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAAGTGTTGCCGCGCTACGCGCCGTCATCAGACGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCTGGTCGAATGCGAGACGCTCGCGTTCGACATCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGATGACGCGCTATCAACTCCAACTCCACGCGTGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCCCTTCACGCTCAACGAAGGTGTCGGCAAACCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGCGATATACTTTTCGTTTGCGTCGTTTGAGGACGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGTCCTTCGGTTTCAATGTAAGCGTCGGCGAACCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGAGGCGCACTTCGGTATTGTTCGCGCGTCGGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGAGGCGCACTTTCAGCGAAGGGCGGTTATTCGTACTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTTGGCGTCGATGTTGATCCTGATATAACGACTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCTATAGCGTGTTGTGACAGCGCCGAACAAACAGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCGAGCGGGTTGCGGATGCGTCCCAGTTGCTGGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCGGCGTAAACGCTGCGGCGTTGATGTCGAGTGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGGTCTCTACAACGTGCTGCTGGCGGTTGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACAAGCGCTGTGGCGCGGCATACGCGCGTCGGCGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTCGCTGGCTGCGCACGCGGCGCGGGGCGTTGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGGCGCCCCGGTGTCGGCATGCACGCCGTACAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTCGCACCCGCTCACGATCCGGCGCGCCTGCCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTTGTCCCGCCCTTCCGGTGAGGCGTATGTGGGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACACGCGGCGGACGCCTATGTTGCCGCAGCAACGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTGGGATTGTCCGCTGATCATCGATGAGGTGCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGAGTCGCTACATCGCGGTGTTCAACGGCATAATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCGCGGTGTCGGGGCGGATCGACGCGCTGCTGGTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCTGGCGGCGCGGTGGGCGTATGTAATGGCGTATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACAATTCCGCCGGTGGCGGATGTCGGGCTGATCGCTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTCTCCTCCTACTTGATGATGATCCGATAATTCCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGTTGCGCCGCATCGCCGGATACAGCGCTTCGTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGCGCGCGGCGGGGGAGTTCGTGATCTACGACCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATACGCCAGCTCAACATCAACAGCGTCGCCGTCGCCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTCGTCCATCTCAGCGCCGCGCAGTCGCGCTGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCTGGTCGGTGCGCGACGGGCGGCTGGTCTACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATAATCGTCGTCGGGTACGTATCGGAGCGCACAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCAATCGGCGCGGCGACGGCGTACCTCGCCGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCGAGTCGCTACATCGCGGTGTTCAACGGTATAATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCGTCGGGGATGACGACGCGCCCGTCGTCATCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGAAGACTTTGTACTTGCTGGTGTCGTCGCCGGGCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGACCGCCCGGCGTCCTCGTTGTCCAACGACCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGCGGTGAGTGAGGAACCGACAGACGACGCGGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGGGAGGTCAGTGATAGGAGGAAGATGATGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGGTTGTCAGCAGTGTCACAACACTCTATAGAAATAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACTGCGCTGCCGCAACCAGCGCTTCAATTGCGGCTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGATACGGCAGATCGGGACGCTTGTTTTCGACGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTCACATCAGGGTCGACATCGATGCCGAGGAGAGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCAGCGCTATACGGTGTGTCTGTGATGACGGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCAGCAGTTCTTGGTCTGCCGCGTCCTCGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCAATCGGCGCGGCGACGGCGTACCTCGCCGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTTCGGCACAATCGCCTTACCCCGCAGTATACTCCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCAGCGCGGGTTCCGACCAGTGCTCCAAAAGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCCATCTCGACATCAACCGCATCGCCGTCGCCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGAAACCCCACCGACGCTGGCGGGGTTCCGGGGAGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCCAACTCGTTGAGTAACCACTCCAGCGCGGGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCCGGACGCGCGAATACTGAAGATTACGTCGGAGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCCGGGATTTGCCGTTGAGGTGAAAGCGAGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCGGATCGAGGAAGGCGCGGAGATCGCAATCACCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCACCGATAGTCCGCTGACGTGGCGCTTCCCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTGGAGGGGTATATCGCCGAGGCGGTCGCTTGGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGTTTGTCAGCAGTGTCACAACACTGCATAGAAAAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGAGACGGTCGTACAACTGTTGGCAAAAGCGCTAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGTGATGTCCGGCGCGGCGCCGGCGGCTATGCTGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCCGCCCGTCCGGTGACGCGCCGCAGTCCCAAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGGGACAGGGCGGCAGCGGCGCCGTCCTGCTTGTGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGGCGACGCGCAGCGCGTAAGCGCGGCGGATCGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGGGGACCCCGTGCGCTGCGGCGCGGCGCTGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGTGCTGCTCCGCGCCGCGCAGGCGTCAACGCGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGAGGAGTGGCGCCATGTCGCCGCCGCCATCGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCGATGCACCGTGGTTCATCGGCGCCGTGCACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCGGTGCAGCCGGAACTGCTCCAGCGTGCAGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTACTCGATCCGTCGGCGCGCCTGGCGGATTGCTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCGAAGTACCGCTATTTGGCGCAGATCGCGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCTGCTGGTCAACCGCGACACCGGCGAGATGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCAATGCGCGCCAGTTCAAACGCCAGCACTTCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCGGCGGTATATGCAGCGCTGCCCGCCCGCAGTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCCGGCAGCAGCGTCGGTGCAACGACGCCCGCGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCGCAGCCCGCAGTACTCTATCGCTGCGGTCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCAGCGGCGCTAACCCCTCGGTCAGCCCGCGCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCGGCGCTGATCGGCGATGCGATCCACGCGCATCTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAGCCGGTTCACCAGGTCAAAGATTGCCGTTTGCGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGGAGACCGAGTGTACCTACTGAAGCTTCGTCAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGAGCGGTTGTCGCTGTTGTATCTTTACTCCAAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGCCGGAATGATATACCCCTCAACCGGCGTCTGCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCGCGCTCAGCAGCAGCACCGCCAGCGTTGCGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGGCGGCGGCGTACCGATTTGGCGCGTCTGTTGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCTCATCCGCCATCTTGCGCAAGTACTCCAGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTAGCGGGTTGCGCGTACAACGTATACGTATCAGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTCAGACGCCGATATGATTCCCAGTGTGTACGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGTACGAGTCGCACACCTGGGATGGTTCACGATGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGACGCATCCCGGATGCGTTGAGTATGGGATGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTTGAACGCGCCGAATCAGTTCGGATTACGCGCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGCAGGGGGGTTGAACGCATTGCGTCATACGCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAGTACGGAGTTTTCCGACTCGGTCGGGAGTCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTAACCGTATCTCGGTGTTGTTCGCGCGCCGGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCCCTATCAACTGTCCTTCATACTCGCGCCAGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACCAACACGACGACGTGGTTCGCAATGACCGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACAGACCCCGACATACCAACCGAGATGAGGACGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGAGGTGACGGATGTACGCGACGCTGGCGCAGTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACAGCGTACTACGTCTACAGGACGGAGAGTGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTACGGACACATCTTCCGGTTCCGCAACCTTGAGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTATGCCGAGGGGAGGAAGGTAATCTACGAGTATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC

>NC_009523|103|11|5434247-5441685|PILER-CR
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTTGTAGCGGCTTCGCTGTAATAGCCCCACAGGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTTATCGCTGGTACGCTTCACTCACAATTTACTACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAAGTGTTGCCGCGCTACGCGCCGTCATCAGACGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCTGGTCGAATGCGAGACGCTCGCGTTCGACATC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGATGACGCGCTATCAACTCCAACTCCACGCGTGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCCCTTCACGCTCAACGAAGGTGTCGGCAAACCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGCGATATACTTTTCGTTTGCGTCGTTTGAGGACGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTCCTTCGGTTTCAATGTAAGCGTCGGCGAACC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGGCGCACTTCGGTATTGTTCGCGCGTCGGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAGGCGCACTTTCAGCGAAGGGCGGTTATTCGTACT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTGGCGTCGATGTTGATCCTGATATAACGACT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCTATAGCGTGTTGTGACAGCGCCGAACAAACAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGAGCGGGTTGCGGATGCGTCCCAGTTGCTGGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGGCGTAAACGCTGCGGCGTTGATGTCGAGTGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGTCTCTACAACGTGCTGCTGGCGGTTGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	AAGCGCTGTGGCGCGGCATACGCGCGTCGGCGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCGCTGGCTGCGCACGCGGCGCGGGGCGTTGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGCGCCCCGGTGTCGGCATGCACGCCGTACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCGCACCCGCTCACGATCCGGCGCGCCTGCCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTTGTCCCGCCCTTCCGGTGAGGCGTATGTGGGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACACGCGGCGGACGCCTATGTTGCCGCAGCAACG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTGGGATTGTCCGCTGATCATCGATGAGGTGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGTCGCTACATCGCGGTGTTCAACGGCATAAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGCGGTGTCGGGGCGGATCGACGCGCTGCTGGTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCTGGCGGCGCGGTGGGCGTATGTAATGGCGTAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	AATTCCGCCGGTGGCGGATGTCGGGCTGATCGCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCTCCTCCTACTTGATGATGATCCGATAATTCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTTGCGCCGCATCGCCGGATACAGCGCTTCGTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGCGCGCGGCGGGGGAGTTCGTGATCTACGACCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATACGCCAGCTCAACATCAACAGCGTCGCCGTCGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTCGTCCATCTCAGCGCCGCGCAGTCGCGCTGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCTGGTCGGTGCGCGACGGGCGGCTGGTCTAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATAATCGTCGTCGGGTACGTATCGGAGCGCACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGAGTCGCTACATCGCGGTGTTCAACGGTATAAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGTCGGGGATGACGACGCGCCCGTCGTCATC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAAGACTTTGTACTTGCTGGTGTCGTCGCCGGGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGACCGCCCGGCGTCCTCGTTGTCCAACGACCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGCGGTGAGTGAGGAACCGACAGACGACGCGGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGGGAGGTCAGTGATAGGAGGAAGATGATGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGTTGTCAGCAGTGTCACAACACTCTATAGAAATA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACTGCGCTGCCGCAACCAGCGCTTCAATTGCGGCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGATACGGCAGATCGGGACGCTTGTTTTCGACGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTCACATCAGGGTCGACATCGATGCCGAGGAGAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAGCGCTATACGGTGTGTCTGTGATGACGGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCAGCAGTTCTTGGTCTGCCGCGTCCTCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTCGGCACAATCGCCTTACCCCGCAGTATACTCCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCAGCGCGGGTTCCGACCAGTGCTCCAAAAGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCATCTCGACATCAACCGCATCGCCGTCGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAAACCCCACCGACGCTGGCGGGGTTCCGGGGAGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCAACTCGTTGAGTAACCACTCCAGCGCGGGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCCGGACGCGCGAATACTGAAGATTACGTCGGAGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCGGGATTTGCCGTTGAGGTGAAAGCGAGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGGATCGAGGAAGGCGCGGAGATCGCAATCACC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCACCGATAGTCCGCTGACGTGGCGCTTCCCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTGGAGGGGTATATCGCCGAGGCGGTCGCTTGGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTTTGTCAGCAGTGTCACAACACTGCATAGAAAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGACGGTCGTACAACTGTTGGCAAAAGCGCTA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTGATGTCCGGCGCGGCGCCGGCGGCTATGCTG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCGCCCGTCCGGTGACGCGCCGCAGTCCCAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGGACAGGGCGGCAGCGGCGCCGTCCTGCTTGTG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGCGACGCGCAGCGCGTAAGCGCGGCGGATCGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGGGACCCCGTGCGCTGCGGCGCGGCGCTGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGTGCTGCTCCGCGCCGCGCAGGCGTCAACGCGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGAGGAGTGGCGCCATGTCGCCGCCGCCATCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCGATGCACCGTGGTTCATCGGCGCCGTGCAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCGGTGCAGCCGGAACTGCTCCAGCGTGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TACTCGATCCGTCGGCGCGCCTGGCGGATTGCTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGAAGTACCGCTATTTGGCGCAGATCGCGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCTGCTGGTCAACCGCGACACCGGCGAGATGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCAATGCGCGCCAGTTCAAACGCCAGCACTTCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCGGCGGTATATGCAGCGCTGCCCGCCCGCAGTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCCGGCAGCAGCGTCGGTGCAACGACGCCCGCGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCGCAGCCCGCAGTACTCTATCGCTGCGGTCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCAGCGGCGCTAACCCCTCGGTCAGCCCGCGCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCGGCGCTGATCGGCGATGCGATCCACGCGCATCTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAGCCGGTTCACCAGGTCAAAGATTGCCGTTTGCGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGGAGACCGAGTGTACCTACTGAAGCTTCGTCAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGAGCGGTTGTCGCTGTTGTATCTTTACTCCAAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGCCGGAATGATATACCCCTCAACCGGCGTCTGCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCGCGCTCAGCAGCAGCACCGCCAGCGTTGCGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGGCGGCGGCGTACCGATTTGGCGCGTCTGTTGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCTCATCCGCCATCTTGCGCAAGTACTCCAGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTAGCGGGTTGCGCGTACAACGTATACGTATCAGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTCAGACGCCGATATGATTCCCAGTGTGTACGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGTACGAGTCGCACACCTGGGATGGTTCACGATGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGACGCATCCCGGATGCGTTGAGTATGGGATGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTTGAACGCGCCGAATCAGTTCGGATTACGCGCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGCAGGGGGGTTGAACGCATTGCGTCATACGCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAGTACGGAGTTTTCCGACTCGGTCGGGAGTCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTAACCGTATCTCGGTGTTGTTCGCGCGCCGGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCCCTATCAACTGTCCTTCATACTCGCGCCAGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACCAACACGACGACGTGGTTCGCAATGACCGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACAGACCCCGACATACCAACCGAGATGAGGACGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGAGGTGACGGATGTACGCGACGCTGGCGCAGTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACAGCGTACTACGTCTACAGGACGGAGAGTGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTACGGACACATCTTCCGGTTCCGCAACCTTGAGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTATGCCGAGGGGAGGAAGGTAATCTACGAGTAT
	TTCAGACGCCGATATGATTCCCAGTGTGTACGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGTACGAGTCGCACACCTGGGATGGTTCACGATG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGACGCATCCCGGATGCGTTGAGTATGGGATG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTGAACGCGCCGAATCAGTTCGGATTACGCGCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGCAGGGGGGTTGAACGCATTGCGTCATACGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAGTACGGAGTTTTCCGACTCGGTCGGGAGTCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTAACCGTATCTCGGTGTTGTTCGCGCGCCGGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCCTATCAACTGTCCTTCATACTCGCGCCAGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACCAACACGACGACGTGGTTCGCAATGACCGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACAGACCCCGACATACCAACCGAGATGAGGACGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGAGGTGACGGATGTACGCGACGCTGGCGCAGTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACAGCGTACTACGTCTACAGGACGGAGAGTGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTACGGACACATCTTCCGGTTCCGCAACCTTGAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTATGCCGAGGGGAGGAAGGTAATCTACGAGTAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC

>NC_009523|103|97|5434247-5441685|CRISPRCasFinder
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTTGTAGCGGCTTCGCTGTAATAGCCCCACAGGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTTATCGCTGGTACGCTTCACTCACAATTTACTACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAAGTGTTGCCGCGCTACGCGCCGTCATCAGACGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCTGGTCGAATGCGAGACGCTCGCGTTCGACATC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGATGACGCGCTATCAACTCCAACTCCACGCGTGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCCCTTCACGCTCAACGAAGGTGTCGGCAAACCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGCGATATACTTTTCGTTTGCGTCGTTTGAGGACGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTCCTTCGGTTTCAATGTAAGCGTCGGCGAACC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGGCGCACTTCGGTATTGTTCGCGCGTCGGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAGGCGCACTTTCAGCGAAGGGCGGTTATTCGTACT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTGGCGTCGATGTTGATCCTGATATAACGACT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCTATAGCGTGTTGTGACAGCGCCGAACAAACAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGAGCGGGTTGCGGATGCGTCCCAGTTGCTGGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGGCGTAAACGCTGCGGCGTTGATGTCGAGTGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGTCTCTACAACGTGCTGCTGGCGGTTGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	AAGCGCTGTGGCGCGGCATACGCGCGTCGGCGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCGCTGGCTGCGCACGCGGCGCGGGGCGTTGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGCGCCCCGGTGTCGGCATGCACGCCGTACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCGCACCCGCTCACGATCCGGCGCGCCTGCCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTTGTCCCGCCCTTCCGGTGAGGCGTATGTGGGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACACGCGGCGGACGCCTATGTTGCCGCAGCAACG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTGGGATTGTCCGCTGATCATCGATGAGGTGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGTCGCTACATCGCGGTGTTCAACGGCATAAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGCGGTGTCGGGGCGGATCGACGCGCTGCTGGTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCTGGCGGCGCGGTGGGCGTATGTAATGGCGTAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	AATTCCGCCGGTGGCGGATGTCGGGCTGATCGCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCTCCTCCTACTTGATGATGATCCGATAATTCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTTGCGCCGCATCGCCGGATACAGCGCTTCGTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGCGCGCGGCGGGGGAGTTCGTGATCTACGACCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATACGCCAGCTCAACATCAACAGCGTCGCCGTCGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTCGTCCATCTCAGCGCCGCGCAGTCGCGCTGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCTGGTCGGTGCGCGACGGGCGGCTGGTCTAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATAATCGTCGTCGGGTACGTATCGGAGCGCACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGAGTCGCTACATCGCGGTGTTCAACGGTATAAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGTCGGGGATGACGACGCGCCCGTCGTCATC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAAGACTTTGTACTTGCTGGTGTCGTCGCCGGGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGACCGCCCGGCGTCCTCGTTGTCCAACGACCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGCGGTGAGTGAGGAACCGACAGACGACGCGGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGGGAGGTCAGTGATAGGAGGAAGATGATGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGTTGTCAGCAGTGTCACAACACTCTATAGAAATA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACTGCGCTGCCGCAACCAGCGCTTCAATTGCGGCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGATACGGCAGATCGGGACGCTTGTTTTCGACGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTCACATCAGGGTCGACATCGATGCCGAGGAGAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAGCGCTATACGGTGTGTCTGTGATGACGGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCAGCAGTTCTTGGTCTGCCGCGTCCTCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTCGGCACAATCGCCTTACCCCGCAGTATACTCCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCAGCGCGGGTTCCGACCAGTGCTCCAAAAGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCATCTCGACATCAACCGCATCGCCGTCGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAAACCCCACCGACGCTGGCGGGGTTCCGGGGAGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCAACTCGTTGAGTAACCACTCCAGCGCGGGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCCGGACGCGCGAATACTGAAGATTACGTCGGAGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCGGGATTTGCCGTTGAGGTGAAAGCGAGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGGATCGAGGAAGGCGCGGAGATCGCAATCACC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCACCGATAGTCCGCTGACGTGGCGCTTCCCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTGGAGGGGTATATCGCCGAGGCGGTCGCTTGGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTTTGTCAGCAGTGTCACAACACTGCATAGAAAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGACGGTCGTACAACTGTTGGCAAAAGCGCTA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTGATGTCCGGCGCGGCGCCGGCGGCTATGCTG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCGCCCGTCCGGTGACGCGCCGCAGTCCCAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGGACAGGGCGGCAGCGGCGCCGTCCTGCTTGTG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGCGACGCGCAGCGCGTAAGCGCGGCGGATCGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGGGACCCCGTGCGCTGCGGCGCGGCGCTGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGTGCTGCTCCGCGCCGCGCAGGCGTCAACGCGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGAGGAGTGGCGCCATGTCGCCGCCGCCATCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCGATGCACCGTGGTTCATCGGCGCCGTGCAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCGGTGCAGCCGGAACTGCTCCAGCGTGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TACTCGATCCGTCGGCGCGCCTGGCGGATTGCTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGAAGTACCGCTATTTGGCGCAGATCGCGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCTGCTGGTCAACCGCGACACCGGCGAGATGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCAATGCGCGCCAGTTCAAACGCCAGCACTTCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCGGCGGTATATGCAGCGCTGCCCGCCCGCAGTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCGGCAGCAGCGTCGGTGCAACGACGCCCGCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCGCAGCCCGCAGTACTCTATCGCTGCGGTCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCAGCGGCGCTAACCCCTCGGTCAGCCCGCGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGGCGCTGATCGGCGATGCGATCCACGCGCATCTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAGCCGGTTCACCAGGTCAAAGATTGCCGTTTGCGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGAGACCGAGTGTACCTACTGAAGCTTCGTCAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGCGGTTGTCGCTGTTGTATCTTTACTCCAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGCCGGAATGATATACCCCTCAACCGGCGTCTGCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGCGCTCAGCAGCAGCACCGCCAGCGTTGCGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGCGGCGGCGTACCGATTTGGCGCGTCTGTTGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCTCATCCGCCATCTTGCGCAAGTACTCCAGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTAGCGGGTTGCGCGTACAACGTATACGTATCAGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCAGACGCCGATATGATTCCCAGTGTGTACGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGTACGAGTCGCACACCTGGGATGGTTCACGATG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGACGCATCCCGGATGCGTTGAGTATGGGATG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTGAACGCGCCGAATCAGTTCGGATTACGCGCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGCAGGGGGGTTGAACGCATTGCGTCATACGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAGTACGGAGTTTTCCGACTCGGTCGGGAGTCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTAACCGTATCTCGGTGTTGTTCGCGCGCCGGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCCTATCAACTGTCCTTCATACTCGCGCCAGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACCAACACGACGACGTGGTTCGCAATGACCGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACAGACCCCGACATACCAACCGAGATGAGGACGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGAGGTGACGGATGTACGCGACGCTGGCGCAGTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACAGCGTACTACGTCTACAGGACGGAGAGTGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTACGGACACATCTTCCGGTTCCGCAACCTTGAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTATGCCGAGGGGAGGAAGGTAATCTACGAGTAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC

>NC_009523|103|13|5434247-5441685|CRT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTTGTAGCGGCTTCGCTGTAATAGCCCCACAGGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTTATCGCTGGTACGCTTCACTCACAATTTACTACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAAGTGTTGCCGCGCTACGCGCCGTCATCAGACGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCTGGTCGAATGCGAGACGCTCGCGTTCGACATC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGATGACGCGCTATCAACTCCAACTCCACGCGTGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCCCTTCACGCTCAACGAAGGTGTCGGCAAACCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGCGATATACTTTTCGTTTGCGTCGTTTGAGGACGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTCCTTCGGTTTCAATGTAAGCGTCGGCGAACC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGGCGCACTTCGGTATTGTTCGCGCGTCGGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAGGCGCACTTTCAGCGAAGGGCGGTTATTCGTACT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTGGCGTCGATGTTGATCCTGATATAACGACT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCTATAGCGTGTTGTGACAGCGCCGAACAAACAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGAGCGGGTTGCGGATGCGTCCCAGTTGCTGGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGGCGTAAACGCTGCGGCGTTGATGTCGAGTGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGTCTCTACAACGTGCTGCTGGCGGTTGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	AAGCGCTGTGGCGCGGCATACGCGCGTCGGCGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCGCTGGCTGCGCACGCGGCGCGGGGCGTTGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGCGCCCCGGTGTCGGCATGCACGCCGTACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCGCACCCGCTCACGATCCGGCGCGCCTGCCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTTGTCCCGCCCTTCCGGTGAGGCGTATGTGGGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACACGCGGCGGACGCCTATGTTGCCGCAGCAACG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTGGGATTGTCCGCTGATCATCGATGAGGTGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGTCGCTACATCGCGGTGTTCAACGGCATAAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGCGGTGTCGGGGCGGATCGACGCGCTGCTGGTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCTGGCGGCGCGGTGGGCGTATGTAATGGCGTAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	AATTCCGCCGGTGGCGGATGTCGGGCTGATCGCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCTCCTCCTACTTGATGATGATCCGATAATTCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTTGCGCCGCATCGCCGGATACAGCGCTTCGTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGCGCGCGGCGGGGGAGTTCGTGATCTACGACCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATACGCCAGCTCAACATCAACAGCGTCGCCGTCGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTCGTCCATCTCAGCGCCGCGCAGTCGCGCTGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCTGGTCGGTGCGCGACGGGCGGCTGGTCTAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATAATCGTCGTCGGGTACGTATCGGAGCGCACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGAGTCGCTACATCGCGGTGTTCAACGGTATAAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGTCGGGGATGACGACGCGCCCGTCGTCATC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAAGACTTTGTACTTGCTGGTGTCGTCGCCGGGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGACCGCCCGGCGTCCTCGTTGTCCAACGACCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGCGGTGAGTGAGGAACCGACAGACGACGCGGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGGGAGGTCAGTGATAGGAGGAAGATGATGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGTTGTCAGCAGTGTCACAACACTCTATAGAAATA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACTGCGCTGCCGCAACCAGCGCTTCAATTGCGGCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGATACGGCAGATCGGGACGCTTGTTTTCGACGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTCACATCAGGGTCGACATCGATGCCGAGGAGAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAGCGCTATACGGTGTGTCTGTGATGACGGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCAGCAGTTCTTGGTCTGCCGCGTCCTCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTCGGCACAATCGCCTTACCCCGCAGTATACTCCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCAGCGCGGGTTCCGACCAGTGCTCCAAAAGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCATCTCGACATCAACCGCATCGCCGTCGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAAACCCCACCGACGCTGGCGGGGTTCCGGGGAGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCAACTCGTTGAGTAACCACTCCAGCGCGGGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCCGGACGCGCGAATACTGAAGATTACGTCGGAGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCGGGATTTGCCGTTGAGGTGAAAGCGAGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGGATCGAGGAAGGCGCGGAGATCGCAATCACC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCACCGATAGTCCGCTGACGTGGCGCTTCCCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTGGAGGGGTATATCGCCGAGGCGGTCGCTTGGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTTTGTCAGCAGTGTCACAACACTGCATAGAAAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGACGGTCGTACAACTGTTGGCAAAAGCGCTA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTGATGTCCGGCGCGGCGCCGGCGGCTATGCTG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCGCCCGTCCGGTGACGCGCCGCAGTCCCAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGGACAGGGCGGCAGCGGCGCCGTCCTGCTTGTG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGCGACGCGCAGCGCGTAAGCGCGGCGGATCGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGGGACCCCGTGCGCTGCGGCGCGGCGCTGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGTGCTGCTCCGCGCCGCGCAGGCGTCAACGCGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGAGGAGTGGCGCCATGTCGCCGCCGCCATCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCGATGCACCGTGGTTCATCGGCGCCGTGCAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCGGTGCAGCCGGAACTGCTCCAGCGTGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TACTCGATCCGTCGGCGCGCCTGGCGGATTGCTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGAAGTACCGCTATTTGGCGCAGATCGCGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCTGCTGGTCAACCGCGACACCGGCGAGATGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCAATGCGCGCCAGTTCAAACGCCAGCACTTCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCGGCGGTATATGCAGCGCTGCCCGCCCGCAGTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCGGCAGCAGCGTCGGTGCAACGACGCCCGCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCGCAGCCCGCAGTACTCTATCGCTGCGGTCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCAGCGGCGCTAACCCCTCGGTCAGCCCGCGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGGCGCTGATCGGCGATGCGATCCACGCGCATCTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAGCCGGTTCACCAGGTCAAAGATTGCCGTTTGCGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGAGACCGAGTGTACCTACTGAAGCTTCGTCAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGCGGTTGTCGCTGTTGTATCTTTACTCCAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGCCGGAATGATATACCCCTCAACCGGCGTCTGCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGCGCTCAGCAGCAGCACCGCCAGCGTTGCGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGCGGCGGCGTACCGATTTGGCGCGTCTGTTGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCTCATCCGCCATCTTGCGCAAGTACTCCAGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTAGCGGGTTGCGCGTACAACGTATACGTATCAGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCAGACGCCGATATGATTCCCAGTGTGTACGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGTACGAGTCGCACACCTGGGATGGTTCACGATG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGACGCATCCCGGATGCGTTGAGTATGGGATG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTGAACGCGCCGAATCAGTTCGGATTACGCGCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGCAGGGGGGTTGAACGCATTGCGTCATACGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAGTACGGAGTTTTCCGACTCGGTCGGGAGTCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTAACCGTATCTCGGTGTTGTTCGCGCGCCGGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCCTATCAACTGTCCTTCATACTCGCGCCAGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACCAACACGACGACGTGGTTCGCAATGACCGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACAGACCCCGACATACCAACCGAGATGAGGACGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGAGGTGACGGATGTACGCGACGCTGGCGCAGTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACAGCGTACTACGTCTACAGGACGGAGAGTGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTACGGACACATCTTCCGGTTCCGCAACCTTGAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTATGCCGAGGGGAGGAAGGTAATCTACGAGTAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC

>NC_009523|103|12|5440378-5441685|PILER-CR
	TTTGTAGCGGCTTCGCTGTAATAGCCCCACAGGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTTATCGCTGGTACGCTTCACTCACAATTTACTACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAAGTGTTGCCGCGCTACGCGCCGTCATCAGACGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCTGGTCGAATGCGAGACGCTCGCGTTCGACATC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGATGACGCGCTATCAACTCCAACTCCACGCGTGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCCCTTCACGCTCAACGAAGGTGTCGGCAAACCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGCGATATACTTTTCGTTTGCGTCGTTTGAGGACGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTCCTTCGGTTTCAATGTAAGCGTCGGCGAACC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGGCGCACTTCGGTATTGTTCGCGCGTCGGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAGGCGCACTTTCAGCGAAGGGCGGTTATTCGTACT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTGGCGTCGATGTTGATCCTGATATAACGACT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCTATAGCGTGTTGTGACAGCGCCGAACAAACAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGAGCGGGTTGCGGATGCGTCCCAGTTGCTGGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGGCGTAAACGCTGCGGCGTTGATGTCGAGTGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGTCTCTACAACGTGCTGCTGGCGGTTGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	AAGCGCTGTGGCGCGGCATACGCGCGTCGGCGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCGCTGGCTGCGCACGCGGCGCGGGGCGTTGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGCGCCCCGGTGTCGGCATGCACGCCGTACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCGCACCCGCTCACGATCCGGCGCGCCTGCCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTTGTCCCGCCCTTCCGGTGAGGCGTATGTGGGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACACGCGGCGGACGCCTATGTTGCCGCAGCAACG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTGGGATTGTCCGCTGATCATCGATGAGGTGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGTCGCTACATCGCGGTGTTCAACGGCATAAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGCGGTGTCGGGGCGGATCGACGCGCTGCTGGTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCTGGCGGCGCGGTGGGCGTATGTAATGGCGTAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	AATTCCGCCGGTGGCGGATGTCGGGCTGATCGCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TTCTCCTCCTACTTGATGATGATCCGATAATTCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTTGCGCCGCATCGCCGGATACAGCGCTTCGTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGCGCGCGGCGGGGGAGTTCGTGATCTACGACCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATACGCCAGCTCAACATCAACAGCGTCGCCGTCGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTCGTCCATCTCAGCGCCGCGCAGTCGCGCTGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCTGGTCGGTGCGCGACGGGCGGCTGGTCTAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATAATCGTCGTCGGGTACGTATCGGAGCGCACA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCGAGTCGCTACATCGCGGTGTTCAACGGTATAAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGCGTCGGGGATGACGACGCGCCCGTCGTCATC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAAGACTTTGTACTTGCTGGTGTCGTCGCCGGGCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGACCGCCCGGCGTCCTCGTTGTCCAACGACCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGCGGTGAGTGAGGAACCGACAGACGACGCGGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGGGAGGTCAGTGATAGGAGGAAGATGATGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGTTGTCAGCAGTGTCACAACACTCTATAGAAATA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACTGCGCTGCCGCAACCAGCGCTTCAATTGCGGCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGATACGGCAGATCGGGACGCTTGTTTTCGACGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTCACATCAGGGTCGACATCGATGCCGAGGAGAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAGCGCTATACGGTGTGTCTGTGATGACGGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCAGCAGTTCTTGGTCTGCCGCGTCCTCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCAATCGGCGCGGCGACGGCGTACCTCGCCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GACCGGCGGGTTTTCACAAGTGCGGGTGCGTACGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTTGGGTTGTTGGGGTGCGTGCATCCGGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GATGAGCGGCGGCTTGCAACGTTGGTGCGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTCGGCACAATCGCCTTACCCCGCAGTATACTCCA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCAGCGCGGGTTCCGACCAGTGCTCCAAAAGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCATCTCGACATCAACCGCATCGCCGTCGCC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GAAACCCCACCGACGCTGGCGGGGTTCCGGGGAGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCAACTCGTTGAGTAACCACTCCAGCGCGGGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCCGGACGCGCGAATACTGAAGATTACGTCGGAGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCGGGATTTGCCGTTGAGGTGAAAGCGAGGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGGATCGAGGAAGGCGCGGAGATCGCAATCACC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCACCGATAGTCCGCTGACGTGGCGCTTCCCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTGGAGGGGTATATCGCCGAGGCGGTCGCTTGGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGTTTGTCAGCAGTGTCACAACACTGCATAGAAAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGAGACGGTCGTACAACTGTTGGCAAAAGCGCTA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGTGATGTCCGGCGCGGCGCCGGCGGCTATGCTG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCCGCCCGTCCGGTGACGCGCCGCAGTCCCAAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGGACAGGGCGGCAGCGGCGCCGTCCTGCTTGTG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GGCGACGCGCAGCGCGTAAGCGCGGCGGATCGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGGGGACCCCGTGCGCTGCGGCGCGGCGCTGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGTGCTGCTCCGCGCCGCGCAGGCGTCAACGCGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CCGAGGAGTGGCGCCATGTCGCCGCCGCCATCGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCGATGCACCGTGGTTCATCGGCGCCGTGCAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGCGGTGCAGCCGGAACTGCTCCAGCGTGCAGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TACTCGATCCGTCGGCGCGCCTGGCGGATTGCTC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCGAAGTACCGCTATTTGGCGCAGATCGCGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCTGCTGGTCAACCGCGACACCGGCGAGATGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCAATGCGCGCCAGTTCAAACGCCAGCACTTCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCGGCGGTATATGCAGCGCTGCCCGCCCGCAGTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGCCGGCAGCAGCGTCGGTGCAACGACGCCCGCGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCGCAGCCCGCAGTACTCTATCGCTGCGGTCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCAGCGGCGCTAACCCCTCGGTCAGCCCGCGCAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCGGCGCTGATCGGCGATGCGATCCACGCGCATCTCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAGCCGGTTCACCAGGTCAAAGATTGCCGTTTGCGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGGAGACCGAGTGTACCTACTGAAGCTTCGTCAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGAGCGGTTGTCGCTGTTGTATCTTTACTCCAAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCCGCCGGAATGATATACCCCTCAACCGGCGTCTGCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGCGCGCTCAGCAGCAGCACCGCCAGCGTTGCGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGGCGGCGGCGTACCGATTTGGCGCGTCTGTTGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCTCATCCGCCATCTTGCGCAAGTACTCCAGGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTAGCGGGTTGCGCGTACAACGTATACGTATCAGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTTCAGACGCCGATATGATTCCCAGTGTGTACGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGTACGAGTCGCACACCTGGGATGGTTCACGATGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCGGACGCATCCCGGATGCGTTGAGTATGGGATGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTTGAACGCGCCGAATCAGTTCGGATTACGCGCTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGTGCAGGGGGGTTGAACGCATTGCGTCATACGCGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCAGTACGGAGTTTTCCGACTCGGTCGGGAGTCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTAACCGTATCTCGGTGTTGTTCGCGCGCCGGATGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTCCCTATCAACTGTCCTTCATACTCGCGCCAGACGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACCAACACGACGACGTGGTTCGCAATGACCGAAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACAGACCCCGACATACCAACCGAGATGAGGACGCGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACGCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGCGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACTGAGGTGACGGATGTACGCGACGCTGGCGCAGTTGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACACAGCGTACTACGTCTACAGGACGGAGAGTGGAGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTACGGACACATCTTCCGGTTCCGCAACCTTGAGGTTTCAATCCACGCCTTCCGGGGGGAAGGCGACCTATGCCGAGGGGAGGAAGGTAATCTACGAGTAT
	TTCAGACGCCGATATGATTCCCAGTGTGTACGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGTACGAGTCGCACACCTGGGATGGTTCACGATG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CGGACGCATCCCGGATGCGTTGAGTATGGGATG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTTGAACGCGCCGAATCAGTTCGGATTACGCGCT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GTGCAGGGGGGTTGAACGCATTGCGTCATACGCGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATGCTTCCATCCGTGTTGATGATTGCGGGTTCGAGT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCAGCGGCAACAGGTTCATCAGGTTCGGGGGGGG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CAGTACGGAGTTTTCCGACTCGGTCGGGAGTCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACGGTTTTGATCTCGCTTGACAGCGCGAGATGCCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTAACCGTATCTCGGTGTTGTTCGCGCGCCGGAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ATAATGGGTACGAGTGCCAAAGCGGTTTATCTCTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TCCCTATCAACTGTCCTTCATACTCGCGCCAGAC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACCAACACGACGACGTGGTTCGCAATGACCGAA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACAGACCCCGACATACCAACCGAGATGAGGACGCG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	GCCAGCGCCTCAAGCACCTTCGCGGCTTTCGGC
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	TGAGGTGACGGATGTACGCGACGCTGGCGCAGTT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	ACAGCGTACTACGTCTACAGGACGGAGAGTGGA
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTACGGACACATCTTCCGGTTCCGCAACCTTGAG
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC	CTATGCCGAGGGGAGGAAGGTAATCTACGAGTAT
GTTTCAATCCACGCCTTCCGGGGGGAAGGCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011959004.1|5441847_5442138_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NC_009523.1|WP_011959011.1|5451770_5452454_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011959001.1|5429134_5429698_-|YceI-family-protein	unknown	unknown	gnl|CDD|377274
NC_009523.1|WP_011958994.1|5421693_5422257_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959008.1|5445472_5447413_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl|CDD|187887
NC_009523.1|WP_041336057.1|5448154_5450653_-|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NC_009523.1|WP_011958996.1|5422665_5423736_-|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl|CDD|223088
NC_009523.1|WP_041334341.1|5424432_5425128_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009523.1|WP_011959012.1|5452797_5453529_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958999.1|5425246_5427109_+|hypothetical-protein	unknown	unknown	gnl|CDD|223893
NC_009523.1|WP_011959009.1|5447414_5448143_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|187782
NC_009523.1|WP_083763342.1|5452362_5452605_-|DUF2281-domain-containing-protein	unknown	unknown	gnl|CDD|378366
NC_009523.1|WP_011958995.1|5422277_5422610_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011958997.1|5423732_5424203_-|flavin-reductase-family-protein	unknown	unknown	gnl|CDD|214900
NC_009523.1|WP_011959000.1|5427108_5429184_+|hydantoinase/oxoprolinase-family-protein	unknown	unknown	gnl|CDD|223223
NC_009523.1|WP_011959003.1|5433169_5434036_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959002.1|5429764_5432854_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|226415
NC_009523.1|WP_011959005.1|5442372_5443404_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NC_009523.1|WP_011959007.1|5444462_5445437_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl|CDD|187820
NC_009523.1|WP_011959006.1|5443522_5444191_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_009523.1|WP_011959004.1|5441847_5442138_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	2.7e-30	99.1	0.4
NC_009523.1|WP_011959009.1|5447414_5448143_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	7e-71	232.9	0.0
NC_009523.1|WP_011959008.1|5445472_5447413_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	4.5e-189	624.3	0.0
NC_009523.1|WP_041336057.1|5448154_5450653_-|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	7.7e-63	207.6	0.0
NC_009523.1|WP_011959007.1|5444462_5445437_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	3.3e-96	316.6	1.3
NC_009523.1|WP_011959005.1|5442372_5443404_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	1.7e-148	488.9	0.0
NC_009523.1|WP_011959006.1|5443522_5444191_-|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	1.3e-46	153.5	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011959004.1|5441847_5442138_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.23494e-32
NC_009523.1|WP_011959011.1|5451770_5452454_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	3.46516e-35
NC_009523.1|WP_011959001.1|5429134_5429698_-|YceI-family-protein	gnl|CDD|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	6.82023e-67
NC_009523.1|WP_011959008.1|5445472_5447413_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl|CDD|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	0
NC_009523.1|WP_041336057.1|5448154_5450653_-|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.00599e-57
NC_009523.1|WP_011958996.1|5422665_5423736_-|threonylcarbamoyl-AMP-synthase	gnl|CDD|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	3.85371e-79
NC_009523.1|WP_041334341.1|5424432_5425128_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.48087e-65
NC_009523.1|WP_011958999.1|5425246_5427109_+|hypothetical-protein	gnl|CDD|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	2.93811e-07
NC_009523.1|WP_011959007.1|5444462_5445437_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	8.09111e-104
NC_009523.1|WP_011959009.1|5447414_5448143_-|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	3.05444e-104
NC_009523.1|WP_083763342.1|5452362_5452605_-|DUF2281-domain-containing-protein	gnl|CDD|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	0.000773693
NC_009523.1|WP_011959006.1|5443522_5444191_-|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	3.79604e-42
NC_009523.1|WP_011959000.1|5427108_5429184_+|hydantoinase/oxoprolinase-family-protein	gnl|CDD|223223	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	0
NC_009523.1|WP_011959002.1|5429764_5432854_-|AAA-family-ATPase	gnl|CDD|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	3.44876e-34
NC_009523.1|WP_011959005.1|5442372_5443404_-|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_009523.1|WP_011958997.1|5423732_5424203_-|flavin-reductase-family-protein	gnl|CDD|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	1.61687e-59

Protein sequences

>NC_009523.1|WP_011959003.1|5433169_5434036_+|hypothetical-protein
MKPVLVYLLITPLLLFIASGRSVTPAHAIPAALAVMPAATTLLRGDDLCIYRPSVLRFFCDTARDGGDAEFVVAFGVAGDIPLLGDVNGDGRDDPCIYRPSVLRFFCDTARDGGDAEFVVAFGVAGDIPLLGDVNGDGRDDPCVYRPSVLRFFCDTARDGGDAEFVVAFGVAGDIPLLGDVNGDGRDDPCVYRPSVLRFFCDTARDGGDAEFVVAFGVAGDIPLLGDVNGDGRDDPCVYRPSVLRFFCDTARDGGDAEFVVAFGITDDIPLIGNVGRPFGVALPLVIR
>NC_009523.1|WP_011959002.1|5429764_5432854_-|AAA-family-ATPase
MLTILVLGPPQILVDGVAVVVPRRRARALVYYLAAQRRPINRERLLALFWPDHERTAARQLLRAALHGVRQAVGPLIEGEEDLAISDDVEVDYRTLEDAVTAPAVDEAALASALARYRDDLLAGFTLPDAAPFTEWLAAGREHARSLAVRGYTRLARAAGARGDMAAALTALDRALAFDPLQEDLQREAIRLHYLAGDRVGAIRRYEQFRDLLDAELGVPPMRETRDIYDAIVTDRLNADLPGAWRHAEQRERPMTSGNGRDATTLPFIGRKAEMATIATIGAGRLALIEGEAGVGKTRLAFEAAAQHTAQGGLALVAAARELEQGLPYQPWIGALRDLLAHPGWSMLRASLDIAPVWFGEVARLLPELLPGAAPPTQADEARLWEGVARLLIALAQQKPLMIVIDDLHWADASSLALLGYVLRRAGNVPLRVVATVRAADHPAPLRTLLTALIREGRLERVLIRRLGVAETESLARALSPRDAARLASWLYRTTEGNPFVIAELVRHARATGLLTSDGRLSATLPDEPVVPASVYSLIQDRLARLSDAARRVIDTAVAVGRVFSFDVVARAAALSETAALDAINELHAARLIEPLPDGRFQFDHSLTMEVAYREVGEPCHRALHRRVAETLEALNRDRLDEVAGQIAWHFIEGGAPERATPYALRAGRHAASVAAWTEAIAFYEQALVGIPQSQRFDALMSLGEALLTGGRAAQATERFRESLALARTPAEARRARLSLARSLAPQGRYAEMIETVRGLEYADDYNVRVTALFLWGTALSLEGSDLAGAALRLREAARLLSSQPAPDRVALAQVRFELGGVAAQQGDLLTALACYREALAVADKAAHDPAATTWRILARNNLAYHLHLLGNLDEAERWVAEGLRLANEYGTPGLQPYLLSTQGEIALARGDLAAAEASFMAGLTLARQIELPERIAGITANLGLVAMRRGQTALAIHHLSTALAHADTLGTRHLAAQIRIWLAPLIPPDEARAALAVARAFASNGERRLLLAEIDRLEQTLAACSRPC
>NC_009523.1|WP_011959001.1|5429134_5429698_-|YceI-family-protein
MAQWIIDDSHSLIQFTVRHMMISKVRGRFDRFSGAIAADEQNPAHSSVNVQIEAASINTRDAKRDAHLTSPDFLDVANYPYITFVSKRIEVQDESHGRIIGDLTIRGVTREVTLEVEYNGQARSPWGTVSAGFHAQTTINRKDWGLTWNVALETGGVLVGDEVTIDIEVELIRQEDQPALTEAAAAS
>NC_009523.1|WP_011959000.1|5427108_5429184_+|hydantoinase/oxoprolinase-family-protein
MDVIGIDIGGTFTDFVLLRDGRVRIYKTLSTPDDPARALVQGIDLLGAPVAVVHGTTVATNALLERRGAPTALITTAGFGDVLAIGRGDRPALYDLNVTRPEPLVPEAWRFELVERLRADGSVLIPLDDAELTRMVAWIAAQPVEAVAICLLHSYANPSHEVRVAAALEQAARAAGRSLFISASYRVLPEPREYERTSTTVVNAYVSPTLGRYLDRLGPALTDRGVRSLRIMASDGGSMGLVTARELAARATLSGPAGGIVGAFAVARRAGFTRIITFDMGGTSTDVALVDGTLPRTSESRVGGVPVRLPGLDIHTVGAGGGSIARVDAGGALRVGPQSAGADPGPACYGRGTLPTVTDANLLLGRLQPDYFLGGRMALDVDRARAVFAMLARDLFGAHDAAAEQRAALGVVRVANALMERAIRAISVERGDDPRDCALVAFGGAGPLHAAHLAAALGIRTVLIPRYPGVLSAFGMIAADVTRETSRALLMTLDALDPATLAAHIGTLADEARAALAADGEDPNGCRIESVLDLRYVGQSYELPTPLDQGWEASPALLADLAERFHALHERRYGHAMRNRQIEAVTLRVRAVSPRDALTFAPDDLPPRATPLAPHAVVNAALTGDTAALEPAPLYERDDLRPGDGIAGPAIIAQLDATTIVPPGWRAVVDADLNLLMTPLPPQSAPADPPA
>NC_009523.1|WP_011958999.1|5425246_5427109_+|hypothetical-protein
MTRIRIVLWLVSCLALALSACGPLSIAEQERIRDLQTVEASTPTATPLPPTDTPVPPSPTPTATPGPTATPVPPTATPVPSPTPLPPTPTPNPALAQFSLCNQSAGDPTGGRFSMRVTAITTTVDLFFERLEVALDVPADSAQPHAFARCRPAPAAPQTVGEVEVAGAYLIEVQFDGWLRDEAFRASLAAPTVPLSGTQVMRAAAFRIPPGVATGATLVIGVDQPLPFRLRLEDNPLRLIIDVATSGPVSQASDLLRMPTGVTPAPTTPIFYLADGDIWRLSNGTAENLTESVRAGQFGDVTALTARADRRLIAFCATAPGAIAADVTAASTLWVLELDSGAVRQLTPPPRGRSCADPAMSPDGTTIAYAVDESGVSPPQLRIFSVQIFPGAPAVALTPSGDEWSRYAPQWLDDARIVYAATAEDGRQTLFLREPDGTELDIGMGLLVSGIGGQRSARYRGFGRMLADPNGSAIAVEALRIDRPGADLLILNPTGAEIERLSPIAAGFWNRPVAWSADGALYYLSTACASGAVFEYTLHVRTLDGADRVIAAGIAPGDLGVFAVRRNALAYVTFDRLPEGSAGPLRVDPDAPSALWYWDLAGNARARLLETNRAITALAP
>NC_009523.1|WP_041334341.1|5424432_5425128_+|response-regulator-transcription-factor
MNPTSIVLVNAHALFREGLRHHLTETGEFHVIGEAGNGQQAIQVVDLLDPDMVVMEVDLPGVNGLEVARAIKRAHPHIRIVLLSSTMDGQEVVKAIRAGIAAYVPRNIAPEKLLQTLHQVRRGHYPINDLVLSSPDVAAQVLNAFRQMAVDEETQNVYSPLSPRELQVLELVAAGHTNKAIAQSLDISNQTVKNHISSILRKLAVNDRTQAVVYAMRRGWIKVPLPDDTAT
>NC_009523.1|WP_011958997.1|5423732_5424203_-|flavin-reductase-family-protein
MPVDEARFRQLMGHFASGVTVVTTEYEGQLFGLTVSSFCSLSLRPPLVLICIDKQVRAHDAIAAAGRYAVNILEKHQEYLSRRFATPEIDKFMGIAWRFGQLGLPILEDTLAAFECRLTDTLPGGDHSIFVGEVQNAEIREGSPLIYYRRGYHELK
>NC_009523.1|WP_011958996.1|5422665_5423736_-|threonylcarbamoyl-AMP-synthase
MTDRIQTRVLTVDPAVPEPQIIAEAAAVIRAGGLVAFPTETVYGLGASALDEQAVARIFHAKERPATDPIIAHIADLCQLDVLARDVPPAAHALARRFWPGPLTLVVLRRPIVPANLSAGRATVAVRMPAHPVALALIAASGVPIAAPSANRFSRPSPTTAAHVLDDLNGRIDLVLDGGATHIGVESSVVDLTVDPPVLLRPGGVTITALREVLPELTFAPRYLAGDEEALPAPGMLLRHYAPNATLTVVAGDHAAALERIRAEAQAAINAGLRVGVLAFDEDAPALADLPVRIVQLGPAANPEVVAQRLFAALRAIEQTGVDLILARDPGQEGLSLTIRDRLVRAAEGRIIVAGQ
>NC_009523.1|WP_011958995.1|5422277_5422610_-|hypothetical-protein
MDFLRRLFGSDERQRDNAIHLYVACGRCQAVVHVRVDPRNDLMPEYGDGDDLIGYRLIKEIMDSRCFRLMRAEIEYDARRREIRRAIEGGAFITRDEYEQRRSAQPSSRD
>NC_009523.1|WP_011958994.1|5421693_5422257_-|hypothetical-protein
MTADTTPLPCCPQCGQNDTVRPVSAIVQEEPESPLAQKLAAPRSPRPVPAIGCATLFFGTMVSISAAIFAVGLTELTATAPRTSLLFGVRDTSVFTGIITFLFVFVGVHGMFVWRQARLNRVFRRAFVAWHRASERWQQLFYCARCDGVFLPGQTTLTPVDQMQTLIYARRQPSQATVAPPSGAEGG
>NC_009523.1|WP_011959004.1|5441847_5442138_-|CRISPR-associated-endonuclease-Cas2
MMVLITYDVNTETEAGKRRLLKVAKACQDYGQRVQKSVFECIIDAAQLRQLQARLERIIDVETDSIRYYYLGDEWRHRVRHVGVAPDVDIEGTLIL
>NC_009523.1|WP_011959005.1|5442372_5443404_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKRLNNTLYVTTPDTYLSLDGETIVVKKDAHVSTRLPLHNLENIVCFNYQGVSPALMGACVDRNIGLTFLDANGRFQARVGGRTRGNVLLRKKQYRISEDRELRAAIATSFIQGKVYNCRKVLERTLRDHTLLIDVEVVRNASAALKEALTSISRCSSIEALLAVEGNAASVYFGVFDHLVLHQKDDFRFEERSRRPPRNNMNALLSFLYTLLTNEAVSALETVGLDPYVGFLHTDRPGRPSLALDLIEELRPIFADRMALSLVNRKQITAKGFTSKESGGVVMDADTRKAVIGAWQERKKEEILHPFLKERIPFGLIPHVQATLLARHLRGDLDAYPPFFWN
>NC_009523.1|WP_011959006.1|5443522_5444191_-|CRISPR-associated-protein-Cas4
MTREYTPDELLPLSGIQHFLFCRRQWALIHIEMQWQDNVLTVEGKQLHERVDDPFFVETRRDVVISRSVPVASYTLGLSGVCDVVEFTRSPEGVRLPGREGFYQPAPIEYKRGHPKRDPVDEAQLCAQAMCLEEMLAVPIPRGFLYYGKTRRREPVELTEDLRRLVRDAAAEMHAYMARGYTPRVKTSKACRSCSLADLCLPNLQEKTSSVQTYIRRQIEQA
>NC_009523.1|WP_011959007.1|5444462_5445437_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTTTLSKKIDFAVILCVRNANPNGDPLNGNRPRTTYEGLGEISDVAIKRKIRNRVMELAKEIERIKEEERTEAQKQAYERLKGVEHPIFVQSDDNRNDEYTSLRERAEAYLKDFMNDRSAYQKKACETWFDVRAFGQVFPFKGKGKGKKGDKSNEGEESDGVSIGIRGPVSIHPAFSVVPVLDRVSSIQITKSVSNEPGEKRGSDTMGMKHRVDHGVYVFYGSINPQLASKTGFSDDDAAVIKEALRTLFRNDASSARPEGSIEVYRVYWWKHNSPNGQYSSAKVHRSLRVRVRDGIEDPKSIDDYVIELQDLDGLKPEVIEGE
>NC_009523.1|WP_011959008.1|5445472_5447413_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MNWMQSLYETYEQCAKGGLVGYVSGTKRPLLPICHITIQAHIEVVIDGCGNFRRAQLVSKDDAVTIIPATESSASRSGSKPECHPLCDKLQYLAGDFVKYGGKVTSGFQRNPAEPHQNFVTLLSGWNSKCLHPKVSAILKYIQKGTLMADLVKEGVLLIDHRRLLAKDDIEPEKRRGTIFDVLNDQGDAVVRWVVEIPGDTESRVWRDTKVWDSWIDYYLNHRSGTSEICFVIGEERTLTNNHPKYIRREGDNAKLISSNDTQGFTFRGRFITDEQACSVSLEASHKAHYALMWLIDRQGYRDGDLAIVAWAISGATVTVPQPTDDPIATLFGDLPSDDKSIDTAQDVAIRLKKKIAGYRQEIGDRTDVVVMGVDSATPGRLAVIYYRTLKGSDFLDRIETWHDTCAWRHTYRVIEERDTNGKLYRRRIPFIGAPAPADIAEAAYGRRLDDRLKQATIKRLLPCIVDGQPLPRDLVESAIRRASNPVVLSDDQKEKVLTIACALYRKYMYGKEQYDMALDETRRTRDYLYGRLLAIADVIEERALYKAEQNRPTNAIRYMQQFSQRPFRTWKQIHDLLMPYLMRLGGRAYYYKNLIAEVESMFTPEDFVSTRSLSGEYLLGFYCQRQKLLEKRADDREDDNDGTSI
>NC_009523.1|WP_011959009.1|5447414_5448143_-|type-I-C-CRISPR-associated-protein-Cas5
MDHRNSVTFKVWGRYALFTDPLTRIGGEKYSYQVPTYEALKGILSSVYWKPTIVWIIDKVRVMKPIRTQPRSVKPLKYHASGNDLAIYTYLADVEYQVQAHFEWNKNRPDLEHDRNEHKHHSVARRMIDRGGRRDVFLGTRECQGYVEPCKFGEGEGFYDNYGELSLGVMFHGFDYPDEYKPGEFWARFWRATMKDGIITFPRPDDQNKILRRFVRPMNAKPPATVGLQEKNLLEGDEEGRQ
>NC_009523.1|WP_041336057.1|5448154_5450653_-|CRISPR-associated-helicase/endonuclease-Cas3
MARVYGVSEMKLQDALIAHRRERDGKEQSLVDHLKGTAELAKRFAGKIGLPELGEVMGLAHDFGKASKEFQDYLKSATGLKNPDEDDYIDYESRKGKIDHSTAGAQLVYEKCSHLGKEGEFLAQFLALAIASHHSGLIDCLTPTGEDNFSRRITKDDSVTHVSEARGKLPEIEDGLNKTLTLDILKQFMQKLQSLREQNDSKETIAFKLGILARFLLSCLLDADRLNTADFEFPENSVIRSYGNYVSWDMLIERLEKTFNEFAQAVAQTKEGSQAREVYQLRSQVARACREAATKPKGIYQLTVPTGGGKTLASLRFALHHAKHHGMDRVFYVAPYITIIDQNADTLRTILEPESERGRVVLEHHSNFVPEEDTHRRHSLLAENWDAPIVCTTQVQFLEALFGAGTRDTRRMHQLAKAVIILDEVQTVPIRIVHMLNVALRFLAHSCGSTVVLCTATQPPLDRLPDNPYRSLIVKQEQRIILNEVELFKSMQRVEVHYARKDGGMTNDEIVDLAGRALDSEGSVLIVVNTRAMARTLYEQIKVRRLAPTYHLSTNMCPAHRMDVLNTIKEKLAAKEPVICVSTQLIEAGVDIDFGAVIRSLAGLDSVAQSAGRCNRHGLRATPGKVWIVNPQEEDIDQLLDIKIGRDQAQRVLSEFKSGNDFIGLEAITTYYRYYYSSRKDEMDYLVRSSSAVGRDDTLFRLLSTNELSVASYRSSRGVNPPLLLNQSFQSAAREFCVIDSPTIGVIVPYGDEGKTIINALCSASELDNRVKFLRQAQRFSVCLFRRQFEELNRVGAILETNSGIHYLDERYYSKEFGWSHDPVNDMDTLIV
>NC_009523.1|WP_011959011.1|5451770_5452454_+|Uma2-family-endonuclease
MADTVALPTITLRSLDAGWNYERWERELPDDGNRYEVIEGILYMTTAPGYFHQWIVRRLDQYVGVPLEQQGLAYAATAPIGVLMPGCEPVQPDFALVRRDRAGIISERRIRGAPDLIAEVLSPSNPEQDTVIKRRVYARAGVPEYWIIRPETRDVLVCRNPDATLGDYTFTLLVGAAETLLAHPFPIRMSVSMMISPLTLYDPIRADADCVATQCYPACPHGLATSR
>NC_009523.1|WP_083763342.1|5452362_5452605_-|DUF2281-domain-containing-protein
MEPANIVREIASLPPEAQKQVIDFIAFLKTRYPVTQPVRKTRRTNLADEPFIGMWRDREDMQDSTAWLRSLRQREWGRRA
>NC_009523.1|WP_011959012.1|5452797_5453529_+|hypothetical-protein
MSNTLYDDARHIVAAAEGAGLSLRLLGGIAVFHLCPTARHPDLSRSYKDIDMIGRTGERTALQRLFSEQGYEPDREFNLLHGAQRLIFRHPTDERHIDVFLDRFQMCHTFDLRERLILHPVTLTPSDLLLTKLQVVEATENDLRDLFAVLSDLPLGDAPNAIDASYIAQLASRDWGVYRTLMLSLERLEQWSAGRPTYGVYRVSAQIAALRAAIEAHPKTVAWKMRARIGDRVRWYDIPDEGG

Crispr_ID: NC_009523_104

• CRISPR_ID: NC_009523_104
• CRISPR_location: 5495144-5495241
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_104

Consensus_repeat	Method
GCTCATGGTCTTTGAATACTTAATCCGCTC	CRISPRCasFinder

spacers of NC_009523_104

>104.1|5495174|38|NC_009523|CRISPRCasFinder
TAGCCCGCGCAGGCGGGCTTCGCCTTGTCTAGCCAAGG

CRISPR arrays and Neighbor proteins around NC_009523_104

CRISPR arrays

The CRISPR arrays of NC_009523_104

>merge|NC_009523|104|5495144-5495241|CRISPRCasFinder
GCTCATGGTCTTTGAATACTTAATCCGCTCTAGCCCGCGCAGGCGGGCTTCGCCTTGTCTAGCCAAGGGCTCATGGTCTTTGAATACATAATCCGCTC

>NC_009523|104|98|5495144-5495241|CRISPRCasFinder
GCTCATGGTCTTTGAATACTTAATCCGCTC	TAGCCCGCGCAGGCGGGCTTCGCCTTGTCTAGCCAAGG
GCTCATGGTCTTTGAATACATAATCCGCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011959051.1|5494007_5494673_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|369777
NC_009523.1|WP_011959059.1|5501598_5502204_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236608
NC_009523.1|WP_011959049.1|5491697_5492249_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041196.1|5495812_5497411_-|glycosyltransferase	unknown	unknown	gnl|CDD|340838
NC_009523.1|WP_011959056.1|5499802_5500204_+|response-regulator	unknown	unknown	gnl|CDD|381116
NC_009523.1|WP_041336070.1|5489919_5491188_+|MFS-transporter	unknown	unknown	gnl|CDD|340863
NC_009523.1|WP_011959057.1|5500207_5500786_-|VTT-domain-containing-protein	unknown	unknown	gnl|CDD|378149
NC_009523.1|WP_011959052.1|5494677_5494965_+|hypothetical-protein	unknown	unknown	gnl|CDD|223090
NC_009523.1|WP_011959060.1|5502293_5504681_-|histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009523.1|WP_011959042.1|5486298_5486529_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959054.1|5497664_5498312_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|223532
NC_009523.1|WP_011959050.1|5492582_5493290_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_083763344.1|5491108_5491597_-|GYD-domain-containing-protein	unknown	unknown	gnl|CDD|378038
NC_009523.1|WP_011959045.1|5487939_5488167_-|DUF433-domain-containing-protein	unknown	unknown	gnl|CDD|225291
NC_009523.1|WP_011959044.1|5487437_5487704_-|hypothetical-protein	unknown	unknown	gnl|CDD|373040
NC_009523.1|WP_011959055.1|5498366_5499632_+|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl|CDD|223411
NC_009523.1|WP_011959058.1|5500808_5501546_-|alpha-ketoglutarate-decarboxylase	unknown	unknown	gnl|CDD|379219
NC_009523.1|WP_049767625.1|5505296_5506769_+|polymerase	unknown	unknown	gnl|CDD|273357
NC_009523.1|WP_011959062.1|5506956_5507823_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl|CDD|223268
NC_009523.1|WP_083763343.1|5487121_5487265_-|YgiT-type-zinc-finger-protein	unknown	unknown	gnl|CDD|240606

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011959051.1|5494007_5494673_+|methyltransferase-domain-containing-protein	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	4.19301e-28
NC_009523.1|WP_083763343.1|5487121_5487265_-|YgiT-type-zinc-finger-protein	gnl|CDD|240606	cd12870, MqsA, antitoxin MqsA for MqsR toxin. This family includes domains similar to the antitoxin MqsA that binds motility quorum-sensing regulator MqsR, a toxin that is highly upregulated in persisters (dormant cells found in biofilms that are a source of antibiotic resistance), thus forming a unique toxin:antitoxin (TA) pair. MqsA neutralizes MsqR toxicity. It binds its own promoter as well as those of genes important for E. coli physiology, such as mcbR and spy. It also binds zinc and has been shown to coordinate DNA via its C-terminal domain. This family also includes the B. subtilis YokU protein, which is functionally uncharacterized.	1.3366e-05
NC_009523.1|WP_157041196.1|5495812_5497411_-|glycosyltransferase	gnl|CDD|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	1.6731e-103
NC_009523.1|WP_011959045.1|5487939_5488167_-|DUF433-domain-containing-protein	gnl|CDD|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.49916e-27
NC_009523.1|WP_041336070.1|5489919_5491188_+|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.26992e-60
NC_009523.1|WP_011959057.1|5500207_5500786_-|VTT-domain-containing-protein	gnl|CDD|378149	pfam09335, VTT, VMP1, TMEM41, and TVP38 (VTT) domain. The VTT domain was previously called the SNARE-associated domain, but was renamed as there seems to be no evidence for association with SNARE proteins.	1.26898e-09
NC_009523.1|WP_011959052.1|5494677_5494965_+|hypothetical-protein	gnl|CDD|223090	COG0011, COG0011, Uncharacterized conserved protein [Function unknown].	2.84857e-07
NC_009523.1|WP_011959060.1|5502293_5504681_-|histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.82819e-33
NC_009523.1|WP_011959059.1|5501598_5502204_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	1.55604e-47
NC_009523.1|WP_011959054.1|5497664_5498312_+|GNAT-family-N-acetyltransferase	gnl|CDD|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	4.58825e-16
NC_009523.1|WP_083763344.1|5491108_5491597_-|GYD-domain-containing-protein	gnl|CDD|378038	pfam08734, GYD, GYD domain. This protein is found in a range of bacteria. It is usually less than 100 amino acids in length. The function of the protein is unknown. It may belong to the dimeric alpha/beta barrel superfamily.	1.39023e-08
NC_009523.1|WP_011959056.1|5499802_5500204_+|response-regulator	gnl|CDD|381116	cd17574, REC_OmpR, phosphoacceptor receiver (REC) domain of OmpR family response regulators. OmpR-like proteins are one of the most widespread transcriptional regulators. OmpR family members contain REC and winged helix-turn-helix (wHTH) DNA-binding output effector domain. They are involved in the control of environmental stress tolerance (such as the oxidative, osmotic and acid stress response), motility, virulence, outer membrane biogenesis and other processes. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.71613e-10
NC_009523.1|WP_011959044.1|5487437_5487704_-|hypothetical-protein	gnl|CDD|373040	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	1.88534e-09
NC_009523.1|WP_011959058.1|5500808_5501546_-|alpha-ketoglutarate-decarboxylase	gnl|CDD|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	2.1495e-05
NC_009523.1|WP_049767625.1|5505296_5506769_+|polymerase	gnl|CDD|273357	TIGR00947, 2A73, putative bicarbonate transporter, IctB family. This family of proteins is suggested to transport inorganic carbon (HCO3-), based on the phenotype of a mutant of IctB in Synechococcus sp. strain PCC 7942. Bicarbonate uptake is used by many photosynthetic organisms including cyanobacteria. These organisms are able to concentrate CO2/HCO3- against a greater than ten-fold concentration gradient. Cyanobacteria may have several such carriers operating with different efficiencies. Note that homology to various O-antigen ligases, with possible implications for mutant cell envelope structure, might allow alternatives to the interpretation of IctB as a bicarbonate transport protein. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.76498e-15
NC_009523.1|WP_011959062.1|5506956_5507823_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	gnl|CDD|223268	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism].	1.00284e-129
NC_009523.1|WP_011959055.1|5498366_5499632_+|Glu/Leu/Phe/Val-dehydrogenase	gnl|CDD|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	0

Protein sequences

>NC_009523.1|WP_011959052.1|5494677_5494965_+|hypothetical-protein
MTNEGLSYPAGLTAQVSIYPLRQQHLSPAIDAALAIWRERELDVQPGAMSTLIAGDETTVWEALRAAFAAATALGETVMVITVSNACPWTPPAQR
>NC_009523.1|WP_011959051.1|5494007_5494673_+|methyltransferase-domain-containing-protein
MTAENWFNPFDNPELVAGYETWYETDGRTADIAERRLIRWLLSGVPQAQSLLEVGVGTGHFARWLASEGYRVTGVDLSAPMIAEAARRGSVLLARADAEALPFPDNAFDGVLLITALEFLPHPERALQEAARVARHGIVLGVLNRWHPLAWQRKRSGLPVWQIARFYTPAELERLVRRVLHPFNLQITWRTTLLPGLWWYSSRLPLGAFTGMRVLLLKQKG
>NC_009523.1|WP_011959050.1|5492582_5493290_-|hypothetical-protein
MAHNQRFQPTAPSLRLKRMSLGSNMIGAWSRTWWIAFAGFALYFGLLLIPKVVPGFGATLFLLSLTFSLMLVVPLLILLALWGTAALVISRVRKRPVRPRSKAAGQIALAGFAAFAAFIVLANVLPSPLPGGSYDRQFDRQVWLDPESANYISGDITPRQKMLAEVVKKLPGLHRSEIENMLGPSLDTAYFQSTGRDLIYITGPERGSLFGMDSEWLLIWLDENGIYKRHAVVTD
>NC_009523.1|WP_011959049.1|5491697_5492249_-|hypothetical-protein
MKRRWDEVQYAYHVPEELRRRIGQTPVFEAGKPLKFSSFTVFLFGMLVGLLAVIMLGLALADGVGKSGWEITLLRGAAGILLGWAAWWILAGWHRERSVRATCEREYREHGILCQARVVFFEMTGLGGGNDTDFYVYYQFRDDFIIKERMDDSNPRKVAEAGDHIQVSYLPRDVRISRIATWK
>NC_009523.1|WP_083763344.1|5491108_5491597_-|GYD-domain-containing-protein
MEKAIKSVGGALEAFYSAFDETNACVIAEAPDNVSVAALAPTVNATGCQLHPWLLDVTAALRHEVGGEVSAPDDGFARRGGIAVRAGRRSAAQHRHEPDALRIAPCEAEPDRWAGAPGLRAPHPCCTPVGFCRGWGATTRSEPTGGALATHRRGSSECKHSN
>NC_009523.1|WP_041336070.1|5489919_5491188_+|MFS-transporter
MKLLSDTARERSVWANRDFLYLWGATVISQLGTQITFLGLPFLAVTMLNATPLTSVLATLGWVPVVALGFVAGAIIDRGRRQPVLIWCDVARAVVLLTIPIACLFGGLSLWQLYAVVLLTGVFSTFFDTAYQARVPSLVPAGQLVAANSGLEIAQSGTRIVGPGLAGALIALLTAPLAILLDALSYLLSALLLLGIRAPETVSDMPPLGTRANRPLRVDIKEGLVFFWREPLLRSLVGCTVLMSVGWALVEGIFLFYLIRTLGLDAGLTGVIFSVGNVGLLVAAAVTGRLVGRWGLGPVVGSAVVLHAGGILLIALAPLAPLPFLITGYLVRAAAVVAYNISQVTIRQCVTPSQMLGRVTATARVISWSSIPSGLIIGGLLATAIGLQTTIWTGALLSCCACIPMILGGVWRVRRLSVPSAL
>NC_009523.1|WP_011959045.1|5487939_5488167_-|DUF433-domain-containing-protein
MNWRDYIVVDPGVCHGKACIKGTRIPVSVILDNLAAGLSLDEVLRSYPSLNREAVQAALLYAAELARERVVAIPA
>NC_009523.1|WP_011959044.1|5487437_5487704_-|hypothetical-protein
MSGRTRPTTDWARIDAMTDDEIDTSDIPPLTEEFFKRATVRLPRHTVTVTIQVDPDVLAWFKAQGDDYEQRMQAALRIYAEAHKDLQR
>NC_009523.1|WP_083763343.1|5487121_5487265_-|YgiT-type-zinc-finger-protein
MIENVPAGVCTQCGTRYYAANVLKTIEESLRGRRQATRQVLVSVYSL
>NC_009523.1|WP_011959042.1|5486298_5486529_-|hypothetical-protein
MTSPAIATVIKMLESLPETVQDQVVEHLREYLADLQDELEWDSLFKRTQPQLVAVARRAKQEIAEGRARPLDYDQL
>NC_009523.1|WP_157041196.1|5495812_5497411_-|glycosyltransferase
MRIAIDARLNAYRTGGIPQYTRQLMAALAHVATDDQIISLQHRDHLRPLVVAPNVARHPLFTPPHHRFERWILPLEVLITRPDVLHFPDFIAPRYRFCPTVVTIHDLAFMRYPDILDRAAAAYYRQVGESAARADAVIAVSETTRQDIAQFLDLPPERIDVIYEAAAPIYTSLSLRPGEARVLSGVPLTEGSFMLFVSTLEPRKNLPTLLRALRICLDRRPDRGYRLVVAGARGWRDEDIFTTVRDLRLADDVIFAGRVGQYDLRWLYNACRLYVNPSLYEGFGLPLLEAMACGAACLASSSSSLPEIGGDAVEYVPALDAGAWADMIEALWDDPDRRATMGRLARARADQFSWQRTARETLAVYRRVVARVPRPSPLPVAVNVNPSLPESPERLARCIRCGQHLVSAPTEGTIIVGASQKCQIAPRAWMCPDCGHIELLAIPAEAPFPADRADSTPVMSQQPDVSSESFDVAVSAAPQEPVSLSDEAPDLPVDQAHGDETIPVAAPERETAHPGDLSLGMGAQRQEGVEGS
>NC_009523.1|WP_011959054.1|5497664_5498312_+|GNAT-family-N-acetyltransferase
MLTISRASMPISIPLQIRAARMDDIYPILRLHCEAFADKFGAAFGVRGTARGIEAMAEAWRRQGRSALRGMFVADSDGLVVGTISLRTWDTASDASGAAELAFHQVLGVWGAVRSIFALSLLDHTIERSEGYITDVAVLARYRRNGIARALLDHVEQEARQRGKKFLGLYVSASNTPARRLYASAGFVDYRTRRSWLAGLILHQRSWIYMRKDLA
>NC_009523.1|WP_011959055.1|5498366_5499632_+|Glu/Leu/Phe/Val-dehydrogenase
MRSDRNNPFRIAQEQFDRAAALLDLPDNVREVLRVPQRELTVRFPVLMDDGSTRIFTGYRVQHNLGRGPTKGGIRYHPSVDIDEVRALAMWMTWKCALVNIPYGGAKGGVVCDPTTLSSGELERLTRRFATEVAIVVGSERDIPAPDVNTNPQVMAWFMDTLSMQQGHTINAVVTGKPIQVGGSLGRNEATGRGVSLMVREWARRQRRRLEDLRVVVQGFGNVGSVAAALIAALGCRVIAVGDASGGYLCRDGLNIIEMRRFADRHPRRLLEGYSAPGVERIDNKTLLETPCDVLVPAALENQITDQNAERIRATLIVEGANGPTTPQADAILEERGITVIPDILANAGGVTVSYFEWVQGLQSFFWNEQDVNQRLEQIMVNAFEQVCDLAEQRGISLRLAAYLLAVRRVADANLIRGLYP
>NC_009523.1|WP_011959056.1|5499802_5500204_+|response-regulator
MKDLCRGYILVVEEDHDLGRLFEAVLTIDGYHVTVTHHIYEAHRILSQREPDLIIFDWSLHNAAGYVWVDELRTTAHTAHIPILLVCGMQPPRSIYEMLASAGVPIIEKPFDLIAFNRCVAALIQPRARAIGA
>NC_009523.1|WP_011959057.1|5500207_5500786_-|VTT-domain-containing-protein
MSEAESRVTRNQEIVITPQKRSWIRPMLVAAIAVALNIIAYLIIPPDLAYRLGSLGYIGVFLITLISNATIVVPIPYFGLVAALSPGLSMVGVGIAGALGSVIGESVGFFVGRSGRGVVEQTRFYRWVQRQLEHPWRAFVVLFALSAPPNPAFDVAGLTAGAMGLPYWIFLSAVFLARLVRFGIVAFFGGAT
>NC_009523.1|WP_011959058.1|5500808_5501546_-|alpha-ketoglutarate-decarboxylase
MTTQPPQLNDRDLELISAYIDGQLSAEERREVERRLDNEANLRLAYEELRATVQVLRDLEPVRPPRSFTLDPANVALQRPPATRLGWGRLLQVAGVFAAVLVAAIGTLSVIGSLGSGAPASVPMVAAPTPAPASPLELRESAPTPERSDIAAAPAALDDGSGPVAPQARATVVATEVAALPDVAPQPTIVTTPAISSPGTVDLARPKPPADSTPPATPPDLTLLLTLAVVALAAGGVLLWRRRKG
>NC_009523.1|WP_011959059.1|5501598_5502204_-|sigma-70-family-RNA-polymerase-sigma-factor
MANEELRLVESAQRGDIESFNALVRLYEGRVYNLCYRLLGDAESAADAAQDAFLSAYRHLRAFRGGSFRSWVLRIATNVCYDALRARQRRSIVSLDAAVETSSEEAAPLQLADTAESPDEFALRRELARAIEAGLAQLPVDQRLVVVLCDLQGLTYEEIAEVTGANVGTIKSRLSRGRARLRDVLRQGELLPLRFRHEGEE
>NC_009523.1|WP_011959060.1|5502293_5504681_-|histidine-kinase
MHLQRQHFPWQATILLVFAVAPMIAGAISFSSSLNLIGKPSIGVLPIWQDAIRCHAVSPITPPSWPAMADGSLQTGDCIETINGISAYHWPLSEVERYADAKDGRNLVDVGVRRGTERFPVQVAALRLTWLHVLQLQFGILPIALFVWMLALIVLLAQPRAEVNQTSAALFLTLALAIVGLYHGLNDEQGRYYTAFTIVISMAWIGPFLYHLALLTPRPLARFAPLRFALHPVGLTTMILHLDSMLAFVPLLRPWRGDAPGIATTINGITMLIGLGAFLMRAGWWVWRGDRAIADQMRVLLLSWGIGAGPLTLASAYYLLTYRAPLGTSFQPFLFFLVILCSGIAYVMLRYQHFAGRSRVLNSLAMIYISATVACAVMVVVLIGIIRMPVDGLMFTALWFATFATTVFWHTDNPFQRLYRRFFLRHHHHYQATLDFATRMNEVSNLEDAAKHGAALVRTAVMCDWAAVHPALTPDRVWLATGSGVEVRRVSAAREVSFSLPASPAMTRALISEGEQLGTLYVGSRSTQEPFDEEDERLIGLLATMLANAMHIRAQIQRLLAVPALMIAAQEQERERIAQEIHDGVMPFLGAIPLGLAQIQRRVQAGDSVDETISVCETYRQRAIKTAQELRAIMRRLQPPLVGATRLGLAIQAFTEEICALYNVPCIISGAGVAYPLNDTTARQAYRIVQQAVVNALQHAHPRLLRVTVAADEHGWECEVSDDGRGFDPDQPQRKNHFGLFSMHERARTIGAALTIDSRPGRGTTVRLRLKKALKIEDETWDVSRYPVSVENVEG
>NC_009523.1|WP_049767625.1|5505296_5506769_+|polymerase
MRLRTCFSSFPVGERDRLAALIGRSPLMASLAAILVGLAGGAVAAFAPFWLGFAALAALAGVYAILVDTRVGLATVIGIATIVPFATLPFRAVITPTLLTLALAALMGVWIMRMLVRGDERVTITPMGMALIGFLGITLFAFLLGSNASPEPSLLHNYVKFTMATLFFFSVVNCVRDRQTVRWVFRFLIIGAAISAVIALVLYVIPDQMALQILVSFGRIGYPTEGRVLRYVEDDPNGLMRAIGLSVDPNSFGGMLALIGALAATQLVSERPTLPRRMLLVATGVILLALFLTYSRAALGGMIVAAMYVATLRYRQLWWVILATGALAAVLFIGLGVGERFVERIVEGVQFRDRANQMRLAEYQNAIAIIQAYPVFGIGFGQAPEIDLVAGVSSIYLAIAQRTGLVGLTAFLGIMIWFFVRNWRALRAASVIGDEERVAWLVSLQAALAAALAVGLLDHYFFNIEFSHMSALLWGTIGLAVAIEEMGVEG
>NC_009523.1|WP_011959062.1|5506956_5507823_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase
MTAIILDGRALAKTLREELRADTQAFIQNNGIAPSLAVVKIAGDPASDRYTRTIRKGCEEIGITFTDHTLPPETTQAMLEETISALSFDRTIHGILLHLPLPPGLDSARAIAQIDPAKDVDGVHPYNAGLLAMGRPGLIPNTPAGGMELLLRNNIPLKGQHATVVGRSVVVGKPMALLLLNEHATVTIAHSRTKDLAAVVRSADIVVAATGKPGLITGDMVKPGAVVVDFGVNVLEDGRVVGDVDFDSVVNVASAITPVPGGTGPVTNVMLLRNVLRAAQQQLASRHH

Crispr_ID: NC_009523_105

• CRISPR_ID: NC_009523_105
• CRISPR_location: 5592763-5592862
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_105

Consensus_repeat	Method
GGCGCTGCCGATGATGTGGCGTTCGC	CRISPRCasFinder

spacers of NC_009523_105

>105.1|5592789|48|NC_009523|CRISPRCasFinder
ACTTTCCGCTGCGGGTGTGGGTACGCTCCTGCCGTCTGGTGCGCCACC

CRISPR arrays and Neighbor proteins around NC_009523_105

CRISPR arrays

The CRISPR arrays of NC_009523_105

>merge|NC_009523|105|5592763-5592862|CRISPRCasFinder
GGCGCTGCCGATGATGTGGCGTTCGCACTTTCCGCTGCGGGTGTGGGTACGCTCCTGCCGTCTGGTGCGCCACCGGCGCTGCCGATGATGCGGCGTTCGC

>NC_009523|105|99|5592763-5592862|CRISPRCasFinder
GGCGCTGCCGATGATGTGGCGTTCGC	ACTTTCCGCTGCGGGTGTGGGTACGCTCCTGCCGTCTGGTGCGCCACC
GGCGCTGCCGATGATGCGGCGTTCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011959131.1|5598614_5599418_-|YwiC-like-family-protein	unknown	unknown	gnl|CDD|379525
NC_009523.1|WP_011959120.1|5576348_5577293_+|response-regulator	unknown	unknown	gnl|CDD|381147
NC_009523.1|WP_011959134.1|5600280_5601090_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NC_009523.1|WP_011959118.1|5573952_5574600_+|4-vinyl-reductase	unknown	unknown	gnl|CDD|198057
NC_009523.1|WP_011959130.1|5597996_5598602_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_009523.1|WP_011959123.1|5584653_5585691_+|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl|CDD|176198
NC_009523.1|WP_011959136.1|5601373_5601682_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959129.1|5595450_5597886_+|DUF3536-domain-containing-protein	unknown	unknown	gnl|CDD|212109
NC_009523.1|WP_011959117.1|5572344_5573631_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340825
NC_009523.1|WP_011959119.1|5574939_5576337_+|multidrug-transporter	unknown	unknown	gnl|CDD|100044
NC_009523.1|WP_011959126.1|5590396_5592589_+|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|223325
NC_009523.1|WP_011959135.1|5601141_5601360_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959128.1|5594034_5595447_+|iron-sulfur-cluster-binding-protein	unknown	unknown	gnl|CDD|224062
NC_009523.1|WP_011959122.1|5583814_5584654_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_009523.1|WP_011959125.1|5588277_5589531_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959133.1|5599963_5600284_-|cupin	unknown	unknown	gnl|CDD|380358
NC_009523.1|WP_011959121.1|5577356_5583818_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|274368
NC_009523.1|WP_011959124.1|5586352_5587315_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376564
NC_009523.1|WP_011959127.1|5593257_5594001_+|(Fe-S)-binding-protein	unknown	unknown	gnl|CDD|223325
NC_009523.1|WP_011959132.1|5599437_5599911_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_011959131.1|5598614_5599418_-|YwiC-like-family-protein	gnl|CDD|379525	pfam14256, YwiC, YwiC-like protein. The YwiC-like protein family includes the B. subtilis YwiC protein, which is functionally uncharacterized. This domain family is found in bacteria, and is approximately 130 amino acids in length. There is a single completely conserved residue G that may be functionally important.	5.48661e-17
NC_009523.1|WP_011959120.1|5576348_5577293_+|response-regulator	gnl|CDD|381147	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains. Pseudomonas aeruginosa cyclic di-GMP phosphodiesterase PA4781 contains an N-terminal REC domain and a C-terminal catalytic HD-GYP domain, characteristics of RpfG family response regulators. PA4781 is involved in cyclic di-3',5'-GMP (c-di-GMP) hydrolysis/degradation in a two-step reaction via the linear intermediate pGpG to produce GMP. Its unphosphorylated REC domain prevents accessibility of c-di-GMP to the active site. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.27066e-34
NC_009523.1|WP_011959134.1|5600280_5601090_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	5.95367e-10
NC_009523.1|WP_011959118.1|5573952_5574600_+|4-vinyl-reductase	gnl|CDD|198057	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons.	7.89468e-12
NC_009523.1|WP_011959129.1|5595450_5597886_+|DUF3536-domain-containing-protein	gnl|CDD|212109	cd10797, GH57N_APU_like_1, N-terminal putative catalytic domain of mainly uncharacterized prokaryotic proteins similar to archaeal thermoactive amylopullulanases; glycoside hydrolase family 57 (GH57). This subfamily of mainly uncharacterized bacterial proteins, shows high sequence homology to GH57 archaeal thermoactive amylopullulanases (APU, E.C 3.2.1.1/41). Thermoactive APUs are type II pullulanases with both pullulanolytic and amylolytic activities. They have an acid pH optimum and the presence of Ca2+ might increase their activity, thermostability, and substrate affinity.	0
NC_009523.1|WP_011959121.1|5577356_5583818_+|GAF-domain-containing-protein	gnl|CDD|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	2.40015e-61
NC_009523.1|WP_011959122.1|5583814_5584654_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.08415e-36
NC_009523.1|WP_011959117.1|5572344_5573631_-|glycosyltransferase-family-4-protein	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	6.57109e-67
NC_009523.1|WP_011959119.1|5574939_5576337_+|multidrug-transporter	gnl|CDD|100044	cd03353, LbH_GlmU_C, N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase. It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.	3.5135e-17
NC_009523.1|WP_011959126.1|5590396_5592589_+|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	1.24402e-86
NC_009523.1|WP_011959130.1|5597996_5598602_+|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	9.56168e-40
NC_009523.1|WP_011959128.1|5594034_5595447_+|iron-sulfur-cluster-binding-protein	gnl|CDD|224062	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion].	0
NC_009523.1|WP_011959123.1|5584653_5585691_+|galactitol-1-phosphate-5-dehydrogenase	gnl|CDD|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	1.27078e-125
NC_009523.1|WP_011959133.1|5599963_5600284_-|cupin	gnl|CDD|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	1.57879e-33
NC_009523.1|WP_011959124.1|5586352_5587315_-|IS110-family-transposase	gnl|CDD|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	2.3151e-21
NC_009523.1|WP_011959127.1|5593257_5594001_+|(Fe-S)-binding-protein	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	1.41461e-50

Protein sequences

>NC_009523.1|WP_011959126.1|5590396_5592589_+|4Fe-4S-dicluster-domain-containing-protein
MTEAFREIYWNVGETVGSLTVYGSALIVLAVMTWGVLRDVNRWRKGRPDMRIDNLRKRAVEFVVQVFGQKKTLKDRRPGIMHAIVFFGFIALFIGTDIIAVEEDFTVPLMGENAGKILVGEFYKNYELIMDFMGLLFIAGLIWMAYRRYTRYPDRLHNRRTDLWALAVLGYIGFSGYFIEGLRLANQTIGGVPVFTQDWAPRAFVGYGLAILFRNIGLGDGSPVGLGLHLFFWFSHTLASFAFIASIPFSKLQHIIYTPLNTFFRDLEPKGALTPIPNLEAEIEKDEPRLGVATLADFTWKQRLDFDACMQCGRCQSKCPAYASGSQLSPKFLITKMANLQRGEPVLLHDGSLGRAHTVLSTDQYNEAPKPIAERTPVYATIEGDRETLPLVEHGIYTENEIWSCTTCRACMEECPAMIEHVDLIVDVRRNLTMIQSEVPSNVKRVLEGIERAGNPWRLPARERTAWTDGLDVPTMAEKESAEVLYWVGCAPAYDERSKRVARAMVQLLTRAGVDFAILGEEESCTGDPARRMGEELLFQAQAQTNIETMHQYRFKKIVTTCAHCFNTIKNEYPQFGGRAGIDYQVVHHTDLLAQLVREGKLTPKRPINQKVVYHDPCYIGRYNDIYDSPRAVLQAIPGVQLVEAPDWNRERAMCCGGGGGNVWMEGWGKRGVNAIRLEQLMQEKPQTLALACPFCMVMFEDAAKNAGVDEQLARKDMAELLLESLDGES
>NC_009523.1|WP_011959125.1|5588277_5589531_-|hypothetical-protein
MARTPTERLLQQQIQTLFPRLSRHWRRALARWVLGALLAGSANRPALAPALATAGIARAATLADAWDAWIAAPAHLINTADPPAAGAPPVVSPLACGADLLRWIRAHWTGGPLVLGLDASHRRADVVLLRMSVLYRGAALPVAWVIVPANQPGAWEPHWERMLRWARSALPLDQEVLTLADQGLWSPRRWHAIRSQQVHPIMRVRPTSTFAPTGQVRQSVLRLAPGPGHGWVGAGVAFTHAPKRIAGTLAVAWGAGHAEPWVLLTDLPPARVDAAWYALRSWDEAGFRQSTSMGWDWQRGQVTDPDAVAWQYLVVATVTRWTVAVGTRIDDAEPQGVPPGRLRRAPPTTGAPLRRRWSGTAQRVISLLRRGAGRRLRWLLAQGRCWVRLWLRPEPLPKIGDSVTMHIYDPSQCLKSP
>NC_009523.1|WP_011959124.1|5586352_5587315_-|IS110-family-transposase
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQLIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELLESVPGIGAITALNLLLRLPELGTINRKEAAAVVGVAPYANQSGAQRKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523.1|WP_011959123.1|5584653_5585691_+|galactitol-1-phosphate-5-dehydrogenase
MMTSTMDALVWLGPRRMELRREPAPTPEPGEVLVAVEAVGICGSELSGYLGQNSLRKPPLIMGHEAAGRIAFDSDAALSDGSPARAGVRVTFNPLLTCGACDRCRAGKSNLCRNRQLISAHRPGAFATYVAVPADLCIPLPDHVSLTLGSLTEPLACSVRAVAHTGTPERLAILGAGPIGLLCLVAARAAGIEHILMSDVSDRRLAVARAWGATVTINARHNVLNAVQAFAPGGVDAVIDAVGLTVTRDQAVRAVTPGGRVVFIGLHEEESMLPANYIVRQEITVTGSFTYSDADFARALALLAEGRVSLDGDWLEERPLAAGPAAFEELLAGATRAAKIVLRVA
>NC_009523.1|WP_011959122.1|5583814_5584654_+|alpha/beta-hydrolase
MSAIHIDNRLVHYEVVGRRGAPVIFLHSWLGSWRYWLPTMEHASERYRTFALDFWGFGESDRRDGAFSIAEYVGMVIDFMNHLGIAKATLVGHGLGGMVALRAVSQHPDRFTRLMIVSTPIQGAQIQNHVKPGALSRLLGRAAPGNVWTRLMRQLNVDYPQILNEIIEDTDSLSETVVQRVIASVAETDLREDLERLETPLLAVFGEKDAIVSPDQARFLHEDHASMQQVIKLPRSNHFPFLDQPNVFNRLLMDFQASNGTQVEIKTEWRRRVSQLEYI
>NC_009523.1|WP_011959121.1|5577356_5583818_+|GAF-domain-containing-protein
MDATTVTSPQVRAWEILTGLAEYGRSGCGSAQDMVQRIAELGQDHLPCPWGVVAVQFAGAMASAGWGISPERRQRLIERTVPIPDQTIELPLYHRDELAGFLWLGMPAAHHEQLAPGFLTTLRHQIELLITLLHRDAAAPAAHLDGSRERLSFDPIETLRAFSLHLSSGPAPDDLPDVVVEWAQQLVPCTAAAITWIDPETGRITQAAAVGAAFATPVHPFNDHQTLSEWVAQYRRALRLDDMRSATFADGRSIGAYLALPLHAGDQVFGVLELVDVQPGRFGEQEERLLTILAAQAAQALASAQRYAADDEHLQTRLVQLRSLQRISRELTSTLYLHNILDFALKEALRATRATHGYVALRGYTVEREAFEMEQSDAISVAITPQTYIVLRSVGENGPVRLIVAGGYSIEEEGRLINVALDGGRTIAEEVIASGEARVIDHLAHDDRPALIGPFPLATLAVPIYYEEQVVGVINLHSTRAHVFDRDALDFMRAVADQIALAIGNEERYHEQRRQRDLLAQRATTLNEVLRIGQEMRADRSLDDVLEQIAFSVAETARYRTVAFYLIDNDDRTTASLVAAAGLPLTEIERLRLRRLPMSLIERLLDPQFRVGRSFFVPGRRMRELFDEADQRLLPTLETGEARTPDEWQADDLLIIPLYRSRSRLVGMMVVDEPYDRHTPTPRSVETLEIFADQASIAIENAMLLREARSQAEQMASLYRASTAMVSSLDLDDLLERIYAEIIAHVGVPSFCFVASYNQSRDELRFEMFKRERETATHLHKRTLPRSGLSGWVIEHGEMLYIKDYLEEQDRLPASPVNLGEAIRSWVGIPLMRQNQPIGVLSVQSFEPHAFSERDVQWLSTIANQLAVALSNAQLFAERGQRINELNLINHIGHITSSTLDIERMFTGVYEALAGFLPIDVFAACLYEAERNIIGNAFIVAGNERSYRYIGRAPSPESLLRHVIAARQSVRLEDMSPASVEVCLDFIHLIDPGQTPASCVGVPLVAGDKEVVGVLTLQSSTPRAYSDRELAFLSTVAVQVALGVQNIRLFTEARDSATALQRKVSELSTLLRTAQVLSSSLKPEDVLQSLMAIVAGQLRVDTVALWKIDADGFLTPAAMQGIPSEMARVLRVPLGRGLTGRVAASGQPLVVANVDEDGTSLYPDFNREHQYTSFMGVPVVYREQTIGVLSVMTVQEREFGADEVALLAGIADQAAIALENARLFAERERRIAELTTLNRISQAINVSLSTEEILEALHRGMSEVLDTSQSFIALYDAKTRRLTFPLVYEHGRRAPDREKEVIVIDDLMGGLTPTVILERRPLLLRTQQEVEAVALLPYNCDDPPICSWLGVPIIQGDEIFGVLNVQSYEPGKFDQDAQRFLVTVANQAAIALSNVRLFQSEQERRRVADTLREVAKILTGTLALDEIFALILDQLARVVPYDTASLMLREGDMLRIVAARGFDESIQERVEHLQLPLDDDPSLARVVYTRRPLVLADARQAPSSSVDEGTEHIRGWIGAPLIVGDEVIGVLNVDSTIVGAYDEEDAQIAFALASQAAQAIHNARLFAEVQRATAELEQRVQERTAELKQTNDQLAAERDRLQALHTITLELTASLDLQTTLNRALELASRAVGARRGSIMLKDLKSGTLICRAVLNTDGSVEAKHFPISFGDKKGLSDWVMRHKKAACIGDVLQDNRWLQEEGRAEDVRSVIAAPLMAQEDPIGVLIVTSAETNFFKQDQMQLLTTIANEVAIFINNATLYTIINEIATERSDLLLQQREENSKNQAILQSLGEGVIVVDGGRKIVLYNAASEQILGIPATFVVDQPLTRIAEYHNGSTVVERAKRIYEGLQQGLQALTETPKNHNRVLELPEPTQSIMLNFAPWVGPRNAIYGSVIVLHDITREVEADRAKRDFISSVSHELRTPLTSIKGYVDLMLLGANGPLNEEQKKSLGVVKNNANRLMDLINDILEIGRIDSDKIQLTFEKVVIGDIFRDVEQTLRAEIKRKRLSFTFDVAADTPPVFADKRRLTQIVLNLASNAVKYTYPEGIVKLRAGLNPAGLLQVDVIDNGVGISPEQQQHLFRRFYRADNPLRDEAGGTGLGLSIAKSFVELHGGQMWVESDLGKGSTFSFIIPLRPSTSEASSEMPEQSWS
>NC_009523.1|WP_011959120.1|5576348_5577293_+|response-regulator
MSKEKILVVEDAPDISSLLKIYFTSQGYEVMTALRGQTALEICRKTPPNLALLDVNLPDMEGYEIGKALRQSARTRHIPIIFLTARGEKQDRLKGLGEVQAEYYIVKPFDIEEVHTIVKGALDRARQKNLTHPVTNLPTAELINEQYRALLATSGWALAMVHINGFETFTQSYGAMVGEEVLKFTALLISEAINELGRPEDFAGQMIVGPSFVITSAPDTIQAICQRLCDRFDADIGLHYDYKDRRNGYITIQGEDGSVRQLPLMSLSIGILTSDDGPFYDIRELSESVEEVRQRALTEAREQGRKSHMSIGRT
>NC_009523.1|WP_011959119.1|5574939_5576337_+|multidrug-transporter
MKRIIIREHTLIPPFGEPARDLRVLNKPLWVLQRDLLAPYCRGALEVDSLEEIPPGNEELFVYRDNLFFNEYLIAAFIRMARSSGRACRIAFARDDAAIVTHALHLQEGIRLDERHGVYVADMFYFPRGPDADPEPLVIDTLPREMGYYHVPSYMARHGDLVFQVPMRAFLSIENWVHLFLANSPFGVFSWGRIHEQLVEESWKEKIAVSLTTLIERLNPFAPPWRNHFLSCSRLVKIGKNCSIDPTAIIHGPTVIGNNVYIGAGVVITNSLIGDNVNIMQGSQVMLSVVSDRCYLPFNAGLFMTTLMENSMVAQLSCLQLCVVGRNTFIGAGNIFTDFHLLNRPIRTFHRWKGAEKPELVEVGLPVLGSAVGHNVKIGSGFVVYPARMIESNTVLLYSAPDTAIGHNVVHLASDDDDVDESGEPRRTVYRWPHRYDLANQNGDDEPHGPMLVSMSFAPTVPARR
>NC_009523.1|WP_011959118.1|5573952_5574600_+|4-vinyl-reductase
MPDERGSADEPEARYYPNLIGRLYLISLEDVMGRNGVNALLNLAGTRHLVNNYPPNNLKREFPFSDLSAISKATETMYGPRGARGMELRAGRYAFNLGLKEFGPLLGMADLALKLMPMTMKMKIVLNATAQTFDRFSDQPSHVEERKGQFLYIIDKCPICWGRKSDRPVGHLAQGILEEALTWVTGGHSFRIEQTECQGMGCERCIFAIDKDPVD
>NC_009523.1|WP_011959117.1|5572344_5573631_-|glycosyltransferase-family-4-protein
MRIVMLAPFGIRPKGTLAARMLPLAQALVRRGHQVVIVAPPVHNPDDAATCVEYEGVPVIHTAAPRAPGVAQQTLALLQATLRQRPDVVHLFKPKGYAGLAALALHHLRPALPLVVDTDDWEGPGGWNDLLPYPSAAKRLFAWQERDLLRRADAITVASRALETLVWSMGIAPDRVFYLPNGVRPSTLNLQPSTFNLQPSTLNLQPSTFNPQPSTLNLQPSTFNPQPSTFNLLLYTRFWELDVREVVAALVGVAARCPNVRLIIVGKGERGEENELLRLVQRTGLASFVDYRGWLMPDHIPATLAEADVALMPMRDTLINRARGLAKLLELMGAGLPIVASRVGQAAEYLEHGVSGWLVPPENPGALAEAVLRLIGDADLRQRLGIGAQYAARQYSWDLLAPIAERAYAQAVNQSYYQFDSMSINRIP
>NC_009523.1|WP_011959127.1|5593257_5594001_+|(Fe-S)-binding-protein
MTAQPRRRAALFVTCIVDQIYPDIGFAAAELLERQGVEVHVPRGLTCCGQMAFNAGFRDDAYAVAGRTIEILRNQGDVVLPSGSCGSMIRHLYHELFHGTRHAAAAKELASRTYELSEYLVDVLGVTDVGARYDGVIAFHDACHGMRYMGLGRQARTLLDHVAGARIVALPGSDECCGFGGLFAVKQHQISEAMLHRKLTHITECGCDLVVTGDASCMTQIAGGLSRSKSRVRACHLAEVLANRVRV
>NC_009523.1|WP_011959128.1|5594034_5595447_+|iron-sulfur-cluster-binding-protein
MSSQTIAFVERVDGALHDPLLQTALERATTRFTGNRARAVADVDNFEALRNQARAIRAGALARLDELLVRLAENVERYGGHVCWAEDGAAARQYIIDLARRRGVRTIVKSKSMASEEIHLNEALEQAGLEVIETDLGEYIIQLAGETPSHIIAPAIHKTREQVRDLFVHHLGMEPTDDIPTMTRTARTVLRQRFLQADMGISGVNFGVANEGAIVIVENEGNARLTTTAPRIHVAIMGIERICESLDDLGVLLQVLARSATGQRLSVYTSIISGPRRPHEPDGPDEFHLVLLDNRRSEIIGGPYAEALMCIRCGACLNACPVYQSIGGHAYGGVYSGPIGAILTPLLQPDLPDAHKLPHASSLCGACEWACPVRIAIPDLLLRLRADAVKNGKFEVYEPLAMFGWRQVMTNPAFYRLGGKMASLGTRLLGRNGPVRWLPPPLDGWTKQRDFPPFAPKTFTELWEERKKQE
>NC_009523.1|WP_011959129.1|5595450_5597886_+|DUF3536-domain-containing-protein
MERYVCIHGHFYQPPRENPWLETIAPQHSAHPYHDWNERIAAECYTPNTASRILDGDGRIIQIVNNYSRISFNFGPTLLAWLEKYVPATYHAIIEADRQSRTLFAGHGSAIAQAYNHMIMPLANRRDKRTQVIWGIRDFERRFGRMPEGMWLPETAVDIETLETLAECGIRFTILSPYQARAVRKIGATTWQDASGGKIDTTMPYLQHLPSGRTIAIFFYNGHISRAVAFEGLLYNGDNFAHRLIGGFHERMGPQLVHIATDGETYGHHHPRGDMALAYALHYLERERLARLTNYAAFLTLHPPTHEVQIAERTSWSCFHGIERWRSDCGCSTGGREGWKQTWRAPLRAALDWLRDTLAARFETAAERLLFDPWTARDDYIRVVLDRSPESVNAFLAEHATRELNTEERIEVLHLLEIQRQAMLMYTSCGWFFAELSGIETVQVLHYAARAIQLARALDGDDLEPEFLRRLAEAPSNIPQFVNGRGVYEQLVLPHVVDLRQVAAHYAATSLFNIQTDPQRVYCYTVEQRRHRVMEAGHAKLALGVARVTSTITLESAELRYGVLHLGDQNLIGAVRTEDGAESYADLLHTISPAFERADLADVVQTLTRHFGRLDYSLKSVFYDEQRAIVRAILAPALEETAAAYQRLYDRHTPLISFLTNQGIPLPPEVATAAEYAMSMAIYRALTADPPDFERARSLIDSAHRAGVSLAREPLIGELRRSIEQVTARLLTDPESSVLFDRLLNLARLVRALPFAIDLWRAQNDVFAIRATHYAELAARARAGDQRARIWTERFATAATLLGISMSGYGR
>NC_009523.1|WP_011959130.1|5597996_5598602_+|Uma2-family-endonuclease
MTTSVPLDVLPVVTAAAPLVGPPQGRWTYADYAALPDDGNRYEIIAGVLYMTPAPGTGHQSVSARLVTFLVTHVEFAGLGRVFAAPVDVELAPDTVVQPDIVVILSANLDRITPSRIIGAPDLVVEILSPGTAGYDRREKQDAYARAGVGEYWIVDPGAQTVELLTLEQGGYRSHGVFRGQARLPSSVVTLPVPVERFFQG
>NC_009523.1|WP_011959131.1|5598614_5599418_-|YwiC-like-family-protein
MAEATTGPVRLRPIALPVEHGGWGFLGAPIVLGLWVAPSVAGIWLGLAALGAFLMRQPLKLALGDRQRGRRYPRTVWAERFVALYGAGALTALLIAWLTTAHPFWLPLLLAVPFAIVQLRYDLLKQSRSLLAEICGANALGALAPAIALCGGWRMTPAFLLWLLLALKATSAIIYVRARIRLARGVPAGRAPVYLTHAVALALVVGLAAIDLVPWLAGAVFGVLLLRAVLGLLPRSLATPTPIVGVQELGMSFLTVAGIAVGFQMGL
>NC_009523.1|WP_011959132.1|5599437_5599911_-|hypothetical-protein
MLYLTILTLHNLMRWVVLLAGLWALYRAYRGWIGAHPWTSDDRRAGRWFALALSLQLLIGGVFYCLPESVAWLAWTNPETVTREPSLRFFVVEHTVQMFVALSLAHAGSALAQKGRNDIQRHRRAALLFSISLLITFVAIPWPWSPYERPLVRLGWG
>NC_009523.1|WP_011959133.1|5599963_5600284_-|cupin
MNATTFLDLAEQVTIPEDGTISRTLYQDSGLKVVVFGFAAGQELSEHTSSSPAIMHFIQGEAQVTLGTDRIDARPNTWVHMPAHLPHSIHAKTPVIMLLLLLKGSQ
>NC_009523.1|WP_011959134.1|5600280_5601090_-|class-I-SAM-dependent-methyltransferase
MAEETYVPGSNLDIAKMPGHWLLARMGKRVLRPGGIELTRRMLDTLAIGPNDHVVEFAPGLGVTARLTIARQPASYTGIERDAAAATAVQKFLTSPHYRCLTGSAEESGLEDGSATVVYGEAMLTMHTQGQKARIVREAYRILRPGGRYGIHELGLTPDNLNDEKKDAILRDLSAAIHVGARPLTSSEWRAVLEAEGFQVQAEHTAPMHLLEPARMLQDEGLGRTLRIVFNILRTPQARQRILTMRRVFRAYQDHLMAISLVAVKPEVV
>NC_009523.1|WP_011959135.1|5601141_5601360_-|hypothetical-protein
MIRVIPRNRRLTALVDQLLDEELSRLSVDPQIGGVSLSPSARAAVVEIVTRTIERVAREETTNTVSPVRHCA
>NC_009523.1|WP_011959136.1|5601373_5601682_-|hypothetical-protein
MMIAGVFADPGAGIDWIALIQIALAFALLSVCCWLIGVTLQARRQNRRRQRRAATETTAPDPARLPAASRRQRCCPLTDIDPLDADHPSDPARHRSISGDLS

Crispr_ID: NC_009523_106

• CRISPR_ID: NC_009523_106
• CRISPR_location: 5637340-5637431
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_106

Consensus_repeat	Method
TCAAAGACCATAAGCCCTCGGCTA	CRISPRCasFinder

spacers of NC_009523_106

>106.1|5637364|44|NC_009523|CRISPRCasFinder
GCCAAGGCAAAGCCCGCCTGCGCGGGCTAGAGCGGAACAATTAC

CRISPR arrays and Neighbor proteins around NC_009523_106

CRISPR arrays

The CRISPR arrays of NC_009523_106

>merge|NC_009523|106|5637340-5637431|CRISPRCasFinder
TCAAAGACCATAAGCCCTCGGCTAGCCAAGGCAAAGCCCGCCTGCGCGGGCTAGAGCGGAACAATTACTCAAAGACCATAAGCCCTCGGCTA

>NC_009523|106|100|5637340-5637431|CRISPRCasFinder
TCAAAGACCATAAGCCCTCGGCTA	GCCAAGGCAAAGCCCGCCTGCGCGGGCTAGAGCGGAACAATTAC
TCAAAGACCATAAGCCCTCGGCTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_011959172.1|5647152_5647719_-|hypothetical-protein	unknown	unknown	gnl|CDD|369297
NC_009523.1|WP_157041204.1|5635572_5635824_+|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_083763349.1|5645182_5646388_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NC_009523.1|WP_157041427.1|5628329_5629322_+|substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|380531
NC_009523.1|WP_011959155.1|5624534_5625392_+|DUF2085-domain-containing-protein	unknown	unknown	gnl|CDD|378277
NC_009523.1|WP_157041429.1|5640403_5641744_-|hypothetical-protein	unknown	unknown	gnl|CDD|227511
NC_009523.1|WP_011959161.1|5631243_5632209_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959165.1|5637471_5638626_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959168.1|5642572_5643913_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_157041202.1|5627175_5627454_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959169.1|5643992_5644526_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959173.1|5648655_5649234_-|hypothetical-protein	unknown	unknown	gnl|CDD|369297
NC_009523.1|WP_011959171.1|5646424_5647090_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NC_009523.1|WP_011959174.1|5649430_5649871_+|nucleotidyltransferase-substrate-binding-protein	unknown	unknown	gnl|CDD|378048
NC_009523.1|WP_157041425.1|5623344_5623923_+|DUF2085-domain-containing-protein	unknown	unknown	gnl|CDD|378277
NC_009523.1|WP_157041203.1|5633802_5634843_-|hypothetical-protein	unknown	unknown	gnl|CDD|223893
NC_009523.1|WP_011959154.1|5623919_5624522_+|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl|CDD|239264
NC_009523.1|WP_011959166.1|5638829_5640086_-|hypothetical-protein	unknown	unknown	gnl|CDD|274666
NC_009523.1|WP_011959160.1|5630838_5631219_-|hypothetical-protein	unknown	unknown	unknown
NC_009523.1|WP_011959159.1|5629318_5630854_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|132912

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_157041429.1|5640403_5641744_-|hypothetical-protein	gnl|CDD|227511	COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton].	1.93008e-36
NC_009523.1|WP_157041427.1|5628329_5629322_+|substrate-binding-domain-containing-protein	gnl|CDD|380531	cd06308, PBP1_sensor_kinase-like, periplasmic binding domain of two-component sensor kinase signaling systems. Periplasmic binding domain of two-component sensor kinase signaling systems, some of which are fused with a C-terminal histidine kinase A domain (HisK) and/or a signal receiver domain (REC). Members of this group share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily and are predicted to be involved in sensing of environmental stimuli; their substrate specificities, however, are not known in detail.	5.4804e-112
NC_009523.1|WP_011959155.1|5624534_5625392_+|DUF2085-domain-containing-protein	gnl|CDD|378277	pfam09858, DUF2085, Predicted membrane protein (DUF2085). This domain, found in various hypothetical prokaryotic proteins, has no known function.	7.16023e-21
NC_009523.1|WP_083763349.1|5645182_5646388_+|sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.34836e-41
NC_009523.1|WP_011959173.1|5648655_5649234_-|hypothetical-protein	gnl|CDD|369297	pfam07274, DUF1440, Protein of unknown function (DUF1440). This family contains a number of bacterial proteins of unknown function approximately 180 residues long. These are possibly integral membrane proteins.	0.000571599
NC_009523.1|WP_011959172.1|5647152_5647719_-|hypothetical-protein	gnl|CDD|369297	pfam07274, DUF1440, Protein of unknown function (DUF1440). This family contains a number of bacterial proteins of unknown function approximately 180 residues long. These are possibly integral membrane proteins.	0.00093768
NC_009523.1|WP_011959174.1|5649430_5649871_+|nucleotidyltransferase-substrate-binding-protein	gnl|CDD|378048	pfam08780, NTase_sub_bind, Nucleotidyltransferase substrate binding protein like. Nucleotidyltransferases (EC 2.7.7) comprise a large enzyme family with diverse roles in polynucleotide synthesis and modification. This domain is structurally related to kanamycin nucleotidyltransferase (KNTase) and forms a complex with HI0073, a sequence homolog of the nucleotide-binding domain of this nucleotidyltransferase superfamily.	3.78165e-41
NC_009523.1|WP_157041425.1|5623344_5623923_+|DUF2085-domain-containing-protein	gnl|CDD|378277	pfam09858, DUF2085, Predicted membrane protein (DUF2085). This domain, found in various hypothetical prokaryotic proteins, has no known function.	9.93258e-24
NC_009523.1|WP_157041203.1|5633802_5634843_-|hypothetical-protein	gnl|CDD|223893	COG0823, TolB, Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion].	3.37366e-09
NC_009523.1|WP_011959154.1|5623919_5624522_+|TlpA-family-protein-disulfide-reductase	gnl|CDD|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.11499e-36
NC_009523.1|WP_011959166.1|5638829_5640086_-|hypothetical-protein	gnl|CDD|274666	TIGR03593, yidC_nterm, membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system. [Protein fate, Protein and peptide secretion and trafficking].	0.00557221
NC_009523.1|WP_011959171.1|5646424_5647090_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.9242e-55
NC_009523.1|WP_011959159.1|5629318_5630854_+|HAMP-domain-containing-protein	gnl|CDD|132912	cd07041, STAS_RsbR_RsbS_like, Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.	4.22577e-33

Protein sequences

>NC_009523.1|WP_157041204.1|5635572_5635824_+|hypothetical-protein
MTTSLQHRCQHVRLTRLRTCGKQQRATQYCLTTYKQEGDHYRSPLRSAGALGIVWGIPRPWRCAGFVLQAIAIRRPPAPYERP
>NC_009523.1|WP_157041203.1|5633802_5634843_-|hypothetical-protein
MYGETDGLSGKTTIWLASAANLTLRRVLATFDHKVGYGVQGAVSPDGNKIVCLVIPSDAGERAARTTAGELWVIDLDDASLHHLANQAGYLAMWTPDSRALVFGRLVALESPKNPQVPFRTELYLVTADGAEQRLLLGDETAYGLQPLGWSVDGQQFYYAIVTLQGQWELWTVDRTGGLTQFQASLPSQYLIQSASLSPDGTKVLLKVLDRGQYALIVLRVDGLEQKTIVSGATGDQPINQYAAIWSPDDQSIFAHIPPQPGQPAHLERIDLRTGQRRVIPTEPIGRDEFVIPQAWSPDGKWLVVLKYPRLQSLAYLMQATGGPMAQIPLTQPSNWVNLFGWTDRR
>NC_009523.1|WP_011959161.1|5631243_5632209_-|hypothetical-protein
MIAFLLAGCQAVLSSALLFAACAKARQPDVLAAVLRAGGLPAAVIRLLILLLPALEAGLALAVLTSPPALLPWTMGIVTGMLLLVTVWGMWVCVRRLSLACSCPSTGKRGRWSVALTCNAGLALLSGVGTTLSFWTPGVSPGLPAWGMALVAIGGAALIALVMHVRTATQETSDYQQAPRGMAPVGRLHTPARRRLLQFFGAAGGAILAFPLFRSAPVLGDGGSNVVAQRMPAPTTAPTDTLNGCISPPRPEEGGSDSGQYSRCSVQVCYCTSCFEVYDSIDKSWVSVARYVCYDSCDGTTVCSTPTWSYRGRVCRQLGCP
>NC_009523.1|WP_011959160.1|5630838_5631219_-|hypothetical-protein
MYIPLFTDIPYRDIPGTIIVELREVPPHMRGHGFTLAKLRAWLGGDEGYITDPYRGERHLVSLKPWLQTNPDVELVLFFDFIFDQDYVRQHPELFPPPPARPPAFIRDTRRKEDDIGPGLRHQEGE
>NC_009523.1|WP_011959159.1|5629318_5630854_+|HAMP-domain-containing-protein
MSRSIQKTWLAILLLFALLPMLAVGGILSWMGGDLQIRQAQSIQDQIALRSEALLANFVEEALMEMNILVRSPGFVSGSTDQRLELLARTIFERNLFESLAVVDNTGMERLHVARIGITPPDRLTSRAADPLFKAAIGAERPVFDDLRFNPLSRELSLPIALPYLLPGNPPQVLIAEARMNRVIEQVVNIPVGDRGTVSLLESDGRVIAHRNRDLIGRTVALSDWSTEHQTIAGTDGTTVLMMLRTFEIGDYTLGIAVEQPLDEVYQPVVQNMLVIATLIALMTLAAIAGSIGIVQTITRPIQRLAHVTKEIGAGDLAQRIPVTRNDEIGMLQRNFNRMVENIVAQQTAIAERNNELEQSLQEQRRLFETVQQLSIPLLPVWEGVIVLPIVGHVDAQRGQALLDALLKGIAERRARVAILDITGIAVVDPDVVAILTRAMQAAALLGATPMLAGISATNAHLMVQQGVANLNVATYRNLQSAIMAAIEYDRTNGNLKTSTLSERRMRHSPS
>NC_009523.1|WP_157041427.1|5628329_5629322_+|substrate-binding-domain-containing-protein
MVQLRLMLLVLALPVMLAACTQPTSSPGGAGGDAPRRWRIGMSQANNAEPWHQAMNAQIAAAAARHPNIEIEFTDARQNNAQQIADVEAFLSKGIDLLIISPNEASPLTPIVASAFQRGIPVIVLDRKVKGEQYTMWIGADNRLIGRKAGEYTARWCREQQRSPCTVIELRGLEGSTPTQERGDGFREGIAANPDVRIIASQNADWLAERADALARVLFEANPDVDVVYAHNDPMGIAAFNVAKEQGRDTDAILFIGIDALATSDGGIQAVRQGKLNVTYVYPTGGAEAIEWALRILEQRETPPREIILDTEEVTTANADAMFQKYGGRE
>NC_009523.1|WP_157041202.1|5627175_5627454_-|hypothetical-protein
MTDKTRDMCHVHGRRARMAAVGAGSVGVPARTTDEARDPGVQLFCTPAPPSLSRVPSRRRDPVDRRCIARNSAAALRLLAAPARPTSLIGVG
>NC_009523.1|WP_011959155.1|5624534_5625392_+|DUF2085-domain-containing-protein
MERTSEEIIELARREIAARKERERDGREVPWRFAFIGLLGAILAGMLLWPGTPLNWKMYAAVHGVCAQVHNVSLGGEQLPLCARNTGIYSGFLLTFIYLLLLGRERAAKLPPPAIVVALVALVVVMAVDGFNSLFVDLFLPHLYTPRNELRTLTGLGMGVSLAVAILLVLNLSLRRDPDMDQPVIGNWRELGGALLLGFLVHAAIYGNVAITYWPIAIVAWTGIVGILFAVNLLIVALVMNYEGRVTRVVELARPATVALVVTAIMLGVMAWGRFWLEGQGLIVS
>NC_009523.1|WP_011959154.1|5623919_5624522_+|TlpA-family-protein-disulfide-reductase
MMRPHNVGGRQVRRPIRLWALVIVSLALAGCGEQRGASPATDRAPVDIPPGIAIESRMIDRGGRLPAPGDPAPDFAFTFAGGETRRLSDLRGTKVVLNFWATWCAPCEEEMPDLQRIDARDDVVVLGVNRLELADVIIPFARERNLTFTLIANPEGDIAERYGAKNLPTSYFINSDGTINHRQIGIMSFEMMQDQVERLR
>NC_009523.1|WP_157041425.1|5623344_5623923_+|DUF2085-domain-containing-protein
MMLIMMTELPSRPAPWIDRAVAWLFRHWLASLNLLAGIYAGLPWMSPWLKANGHPVAGEIIFRIYTPLCHQRPERSFCFCGYQVAFCHRCTAFYGGLFIVGILFSVVRCWIRPAPLTLGALLLVPMALDAGTHIINEILSLGWRDGGDDIGSLNFWLRMITGALAALAVMLVVYPRLERELPAQARGIGGMQ
>NC_009523.1|WP_011959165.1|5637471_5638626_-|hypothetical-protein
MITSQSGPVVLVVADDLQRREQLAALRRLRPTIAIAHPRGPLARQLFMDLLACDDAIDPLPWLISARAQTVALLALALALDFATSCAASRSNERRALAAASDAAWSAAMREADARSRALFGRLLTASDAWIAPDRLVDRIADARDADAVRRLLSQMRARSELPVETTPQRSLVEPTIAVLLADLLRLPDAVDPVAWLATARGEAVARLSLDAMLRQVLPTPQHLLAERGAEVRPPIRPRLRVRAGSLIARLERMEFYANCFRLHFRARIISADAAKMMFQSFTPDALTRWNGVTRVVDDAGYRYVVQIEDYEVMNQCWWWRQELTLVCWPALDAAARSLTLHQQPAALARYRIPRIGDQMVPLAMPELGALQVRIPLPHEVVFE
>NC_009523.1|WP_011959166.1|5638829_5640086_-|hypothetical-protein
MLVRNLAVIVALLVLWLSPNAGSIARRCHIVNVLFQRLFIGVGLIFLTSGCTVGQADTATPAVSTPPAVTASPTVEQADAATPAASTPPAVATPPAGVSFPALLVIDTDQRTLMEYRNGQAQQRFADLTEGGTILDGMLVADAVVILQERGLRRIRLTDGDSRFQSFNQTVRSGALIRAGDDTVIYEAKVDNPQAEFGVGTAIELYRTTDDSMKALLTLARNVGVLHMTADQQRLFLLPFGQDPSFGTLLVVNVGDGQVLEERAIEGEVFATISPDGRRLVTTSRRAASAGAQEEGVLLDYDLTAPSATPQIISLPKAPGHAWRLTWSPDSRALYFLLRPGDIYDEPATSFGVYRLDAASGVVEQVTETAPVDAFLRTDGQWLMLQHSGERRVTMINLATRSSTVVDLPTQAIVVGWR
>NC_009523.1|WP_157041429.1|5640403_5641744_-|hypothetical-protein
MYACVLPNHSTDLAMKAVTSPAGEGRVYMLEHSYPVGDQRRWWAQHALIPVDRYIFDIWIQVGPETADLPVDALTEMVNTFQVTVSHNLTPSTPRVTPAAVSATLVAVRGLSGATALAAGNAHICALLQTGTVQCWGRNESGQLGDGTSGGSRATPVAVRGLSGVTVLVAGSAHTCALLQTGTVQCWGLNDNGQLGDGTTANRATPVAVRGLSGVTALAAGSAHTCALLQTGTAQCWGSNFSGQLGDGTTTDRLTPAVVSGLSGVTALAAGWDHTCAVLQTGTVQCWGSNFSGQLGDGTTTDRLTPVAVSGLSGVTALAAGGAHTCALLPTGTVQCWGRNESGQLGDGTTANRVTPVAVSGLRGATALAAGGAHTCALLPTGTAQCWGRNESGRLGDGTSGGFRATPVVVSGLSGATALAAGGAHTCALLQTGTAQCWGENRFLRN
>NC_009523.1|WP_011959168.1|5642572_5643913_-|hypothetical-protein
MTDTPMGHSCFLTAHSAGLLRRRFITVILIVGILQGCAQPAPELPGPLPVRVLEAPDAWPQPPPPLAVDDPRVQNDPQIRQRLHLEHNQPSIYLRSAELVQLSPHPTPAPFVPPSRSPFQFGGRITATIIPYQESALDRRDMTRTLHLDPEQPLRGVLAIEGSFHVHGPMHDLGVIVLFDYQQIEVTLGGMTARAHVVRIPQDRGVLYDFAIPDRLPPGNHTLTIVLMYDPTGLYTSYAVQDMYLARGRRGLTGRWLPLSAPYAWTIPLRVGADARLPAIDLQHPDRLPIPTNYLHGRLKLSRSSNPGDAITGIESHVLAADEAGRLYAFVTYDPVAGDPQLQQTQAMLSVFLDDQQVPIAGTFAYFFDVHPGELYRIPIDLPIPDDGYVHTISAFVTFLPFLPSQYFDGPQPDWLTLAMDPRSARVVPVVPSRDWIPFFPPLTQE
>NC_009523.1|WP_011959169.1|5643992_5644526_-|hypothetical-protein
MMRRTSVIVFILVLIFSAFSSTPLRAEGQRYDDEPVKVVTNRRQVTLSRVFTYEDGRIEPNASLPAPGGGTIQWIVSSTINLYEYGAADCEVKSYTYDRVWQLYLEKGLWIIDYRIVSSVTDYRRDYRNISFYSWYNGRFFTGFGEQYLQCIGDQHVAIVEPGGNSHKLPTVVDIYW
>NC_009523.1|WP_083763349.1|5645182_5646388_+|sensor-histidine-kinase
MVGYGRMRVPMGVWQALHRSLAQREIGLMWLLLFRWAALSLALVQSFLIEAERLPQAIPHLILVAIYTLGWTILALRPTQEATTIMHRRWFVGGDAIALITLNLATGGWHSPLYRYTFAALTMPPYLFGRRGLWWSLALLVAWHGGIAWQQRLPAHVITALALDGMMFGGLLTLSAYALHLVEAQRRLAVQRAAAEERLRIARDLHDDAVQQVYSIVLLLKGALRHSADEGGRQEVQRVYAQAVQAWEGLRRYLRDLRDPLDTRTFSERLRQGADAFTRLTGIPVDLDLDEVDLPEETGLQMLAITREALSNVYRHARARSVALRLRVVGETLVLEIADDGVGFDPQAVTALDGGYGLRGIAERVALLDGAWSIVSQPGQGTRVQVRLPCPAPLEEEEKAE
>NC_009523.1|WP_011959171.1|5646424_5647090_+|response-regulator-transcription-factor
MVRILIVDDHPLVRSGLRAEIEVHEGMQVVAEAGTAAEALERLAVERPHVAVIDVRLGDECGIDLGRRIVAQSPCAAVLLTAFDWDVYLVRAWEAGAAAFVTKSDDTTALVEAIRGAADGARVFSAEQRTRIDAWQRNIAAPLALLSERESAVLRLMVEGATNREIAVELGLAVKTVEAHVHSILRKLRQPSRRAALVWARRHRITEYAPSKTPLHRRFPW
>NC_009523.1|WP_011959172.1|5647152_5647719_-|hypothetical-protein
MSTQLRIDRSATAQVVRVSAAPLLTKIEVSGAIAGLVGGVTMAVVGAILAIAMGADLWKAPKLIATFVLGLGATAGTGFVVLPVIIGSLIHLALSALFGVLYGVLSCRIWKMPLDYGAPVVFGFVYGLAIWLVAYFVVLPVVNPLLLEIYAPSFLIQNMVYGMILGMTYAAFRSAPYIHFETRSPAKA
>NC_009523.1|WP_011959173.1|5648655_5649234_-|hypothetical-protein
MNAKRSLDGMDIETKATRSDRTSVEMSGALAGLVGGVMMAIVGAILALAIGDDLWKAPKLIATFVVSPDSVAAPGFLAGPVIIGSMIHLALSVLFGVGFGILTTRIWKMPLAYGAPMVFGFVYGLAIWLIAYFIVLPLLNPLILEIYAPSFLIQNLTYGISVGLAYGLLHASSRSEITAGRRLQRGEVKTAR
>NC_009523.1|WP_011959174.1|5649430_5649871_+|nucleotidyltransferase-substrate-binding-protein
MSEVERCRHPAAMSRERFIERQRQVREAAARLAEAVAQPETDIARDATIKRFEFTFEVAWKALRLFLEHQGHECNSPRSTIKTAFVEGLIATPEEADVWLRMLEDRNLTSQTYNEALARRTYNAIVEEYAVRLSAMATTIQSLAWE

Crispr_ID: NC_009523_107

• CRISPR_ID: NC_009523_107
• CRISPR_location: 5793803-5793903
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009523_107

Consensus_repeat	Method
TACCTGCTCGCTCACAGAGCAGGCAGGTTC	CRISPRCasFinder

spacers of NC_009523_107

>107.1|5793833|41|NC_009523|CRISPRCasFinder
TGTCTCCTACCTTCTATCTTCTACCTTCTCATTATCTGTCA

CRISPR arrays and Neighbor proteins around NC_009523_107

CRISPR arrays

The CRISPR arrays of NC_009523_107

>merge|NC_009523|107|5793803-5793903|CRISPRCasFinder
TACCTGCTCGCTCACAGAGCAGGCAGGTTCTGTCTCCTACCTTCTATCTTCTACCTTCTCATTATCTGTCATACCTGCTCGCTCACGGAGCAGGCAGGTTC

>NC_009523|107|101|5793803-5793903|CRISPRCasFinder
TACCTGCTCGCTCACAGAGCAGGCAGGTTC	TGTCTCCTACCTTCTATCTTCTACCTTCTCATTATCTGTCA
TACCTGCTCGCTCACGGAGCAGGCAGGTTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009523.1|WP_157041437.1|5783521_5784568_+|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl|CDD|235640
NC_009523.1|WP_011959294.1|5795698_5797477_+|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl|CDD|366703
NC_009523.1|WP_011959296.1|5799649_5800753_+|aminopeptidase-P-family-protein	unknown	unknown	gnl|CDD|223085
NC_009523.1|WP_157041439.1|5791238_5792264_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|379165
NC_009523.1|WP_083763350.1|5787192_5788491_-|MinD/ParA-family-protein	unknown	unknown	gnl|CDD|349765
NC_009523.1|WP_011959282.1|5780422_5782447_-|transketolase	unknown	unknown	gnl|CDD|223100
NC_009523.1|WP_011959283.1|5782490_5783144_-|fructose-6-phosphate-aldolase	unknown	unknown	gnl|CDD|234947
NC_009523.1|WP_011959286.1|5785575_5786364_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224582
NC_009523.1|WP_011959285.1|5784638_5785583_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_009523.1|WP_157041209.1|5792724_5793783_+|hypothetical-protein	unknown	unknown	gnl|CDD|379090
NC_009523.1|WP_011959289.1|5788753_5791246_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|316802
NC_009523.1|WP_041336158.1|5794068_5794386_+|divalent-cation-tolerance-protein-CutA	unknown	unknown	gnl|CDD|376987
NC_009523.1|WP_157041441.1|5797623_5799582_+|GAF-domain-containing-protein	unknown	unknown	gnl|CDD|226434
NC_009523.1|WP_011959287.1|5786437_5787175_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_009523.1|WP_011959297.1|5801011_5801566_+|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl|CDD|377219
NC_009523.1|WP_011959293.1|5794500_5795649_+|SagB/ThcOx-family-dehydrogenase	unknown	unknown	gnl|CDD|380318

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009523.1|WP_157041437.1|5783521_5784568_+|RNA-polymerase-sigma-factor-RpoD	gnl|CDD|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	6.0455e-147
NC_009523.1|WP_011959294.1|5795698_5797477_+|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl|CDD|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.81448e-31
NC_009523.1|WP_011959296.1|5799649_5800753_+|aminopeptidase-P-family-protein	gnl|CDD|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	4.68487e-102
NC_009523.1|WP_157041439.1|5791238_5792264_-|AAA-family-ATPase	gnl|CDD|379165	pfam13401, AAA_22, AAA domain.	5.78851e-06
NC_009523.1|WP_083763350.1|5787192_5788491_-|MinD/ParA-family-protein	gnl|CDD|349765	cd03111, CpaE-like, pilus assembly ATPase CpaE. This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.	1.9777e-48
NC_009523.1|WP_011959282.1|5780422_5782447_-|transketolase	gnl|CDD|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NC_009523.1|WP_011959283.1|5782490_5783144_-|fructose-6-phosphate-aldolase	gnl|CDD|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	1.36975e-136
NC_009523.1|WP_011959286.1|5785575_5786364_+|ABC-transporter-permease-subunit	gnl|CDD|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	2.1797e-10
NC_009523.1|WP_011959285.1|5784638_5785583_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.34379e-98
NC_009523.1|WP_157041209.1|5792724_5793783_+|hypothetical-protein	gnl|CDD|379090	pfam13248, zf-ribbon_3, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	2.51662e-05
NC_009523.1|WP_011959289.1|5788753_5791246_+|alpha/beta-hydrolase	gnl|CDD|316802	pfam14312, FG-GAP_2, FG-GAP repeat.	1.00061e-16
NC_009523.1|WP_041336158.1|5794068_5794386_+|divalent-cation-tolerance-protein-CutA	gnl|CDD|376987	pfam03091, CutA1, CutA1 divalent ion tolerance protein. Several gene loci with a possible involvement in cellular tolerance to copper have been identified. One such locus in eubacteria and archaebacteria, cutA, is thought to be involved in cellular tolerance to a wide variety of divalent cations other than copper. The cutA locus consists of two operons, of one and two genes. The CutA1 protein is a cytoplasmic protein, encoded by the single-gene operon and has been linked to divalent cation tolerance. It has no recognized structural motifs. This family also contains putative proteins from eukaryotes (human and Drosophila).	9.96064e-41
NC_009523.1|WP_157041441.1|5797623_5799582_+|GAF-domain-containing-protein	gnl|CDD|226434	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms].	7.47507e-29
NC_009523.1|WP_011959287.1|5786437_5787175_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.25355e-86
NC_009523.1|WP_011959297.1|5801011_5801566_+|SMC-Scp-complex-subunit-ScpB	gnl|CDD|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	2.74058e-66
NC_009523.1|WP_011959293.1|5794500_5795649_+|SagB/ThcOx-family-dehydrogenase	gnl|CDD|380318	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC. This family is the oxidase domain of NRPS (non-ribosomal peptide synthetase) and other systems that modify polypeptides by cyclizing a thioester to form a ring. These include EpoB, part of the epothilone biosynthesis pathway; TubD, part of the tubulysin biosynthesis pathway, MtsD, part of the myxothiozol biosynthesis pathway; IndC, part of the indigoidine biosynthesis pathway and TfxB, part of the trifitoxin processing pathway. All are FMN-dependent and oxidize the product of the cyclization of thioesters in short polypeptides.	2.01503e-59

Protein sequences

>NC_009523.1|WP_157041209.1|5792724_5793783_+|hypothetical-protein
MQVEGSTSSLRHLEVSMSHSVSPDVHRLVADAIAAIRSGDKARGQKLLMQALRINPHHEVAWLWMASLVETPERRRECLERALAINPHNETARRALRALSEPQPPHATPQQHVDALDQTFHSSPTSVHEHVQTATQANRTQDDQARHCPHCGAPLETTATFCAFCKSPVAPHPASDAPSLSLTNKERRRLETSKDTRNRRRPSFLEHFSSFCFFLIFAPMVFCTILSSPSLSIFLLLISAPPLILSSMELYRNYQIERSLKKAKSRVDCPVLDIWKDDDSESISYFIAWELMVTDQHGQPLRLQQAQKIYGYRLYGCLKMRRTVRVRYAPEQPDVSILDEEWVAAIQKSSHV
>NC_009523.1|WP_157041439.1|5791238_5792264_-|AAA-family-ATPase
MTSGATSDNDTPRLENPFIQRTRIVDAARFAGRWRELSLIFDAIEARRPVIVTGPPGIGKSSLLTHITASAAVHLEEPLLPSFYLALHEAATPEDVYETVLQALGIPGATSAALEVALLEMETPVLLCLDDAHRALDAGWGDTLLNTLARIARGGQLILVVASAGEMPLLSERFASVRLGAFAPAEVRLFAETYLEGTGVSFTPAELRLLSNLSAGHPAYLQRAAYHLFESRRDGRDWRAHFLVEARERPIPGAPLPPEAFEGEEGEGGIRPRYGTLQTERSGAEDTLFPLPEAPRALLLMIVPLAALLVFVAVGNVITAVLVALSGLMIALVWWYRCRVS
>NC_009523.1|WP_011959289.1|5788753_5791246_+|alpha/beta-hydrolase
MRSWKRLSAPVAGVVLITLLTLFAPARSVMMQSSLTFTQTKLLAADAAQYNYFGLSVAVRGDTAIVGAYGKSDLVRNAGAAYAFTRNAGSWTQQARLGTSSPLIDAYLGATVATNGSYTAAGAPYASVGAQNDGVVYLFSNATWQQQTILLPNDPDSLSQFGNALAINDNTLFVGAPMHDSFGVNAGAVYVFTFDGASWVQQQKLIGVDTAPGDRFGSALALNDGWLAVSAPLHSSPGSPGGAVYLFEFDGVSWVQRYKVGAPDTIAGDRFGSAIALDDGWLAVGVPLHRFVGSASGAVYLFEFNGTAWVQRQKFVASDTAGSDQFGSALALENRRLVVGAPLHNSNGPASGAVYIFERATTTWIERAKLIGSDTNAGDRLGGSISIDGNTILVGAYGDTAAGPATGAAYVFVEVTGPGVTTTPSIIVTPTETSTPSATPSNTPSPTFTSTPSATPSNTPSPTFTSTPSPTPSATPTFTSTPSPTPSATPTFTSTPSPTPSATPTFTSTPSPTPSATPTFTSTPSPTPSATPTFTSTPSPTPSATPTFTSTPSPTPSATPTFTSTPSPTPSATPTFTSTPLPTPSATPTFTSTPSPTPSATPTFTSTPSPTPSATPSNTPSATPSNTPTATATVPPGTGTPRPILACVARRSPASYVAIFGYEMEGTAPVHMPVGGENRFNRYREDLGQPTTFEPGTRRAAFAVVFDGLPLTWSLAGRQVTAWANYPIRCSSDAVVRIQPILECTLPDSNGTTIARFGYRNDNAFNVAVPVRWQNFFVPAPIQRGQPVVFAPGRHRFVFETGFSRGALVWFLDGRIAVATNAPVQACQFN
>NC_009523.1|WP_083763350.1|5787192_5788491_-|MinD/ParA-family-protein
MHCAVIGDHSDRKETLVTSRSLRIIVITSPDQLDQEWINRLAREADVEGLDRVGSVAAGVLLAQQHRPDLVIVDRDVEQTESAIRQIFTQVPSTLCIAVTPSADVTSLRRLVMAGARDVIGRPIQHADLMNSIHAVIAAERDRVARSSAGGDRRNGRLVVVIAPKGGVGATTIAANLAVALRQVTNTGVALADMGLQFGDVGVHLNIWSRHTLYDLVMHAYELDDALFEKVLQAHSSGIKVLLAPHDLEMAGDISREAVAAVVHGLLERHTYVVCDTWSFLDEVTETLLEKADDVLVVTTPEVPALRHTKSFLEHISRNELTRGRITLVLNRFPSVNGIALQDIQKHLRYPVGANIPSEGQPITHSINRGVPVVMAHPQSWAGQSFLNLAAYVAGDGAQLISLKRSGGKKAGKGSLPGVKERRSLFSLVRGA
>NC_009523.1|WP_011959287.1|5786437_5787175_+|response-regulator-transcription-factor
MRLIRRIAERAHEDNAHPRRILIADDDPSIAMLIQVTLKDPRYEIVAVKNGLEALKAFNESKFDVVILDVMMPYVDGFEACQRIRERSDVPIIILTARDGTDDIVHGFELGADDYITKPFKTAELIARVDAILRRVEGYKHRVAPPVVRVGEIEIDEPRHRVTVRGKEVNLTPMEFELLYFLAANAGHVFDRETLFREVWGYDYVGETNLVDVCVRRLREKVEAEPSRPRMILTVRGVGYKMAEA
>NC_009523.1|WP_011959286.1|5785575_5786364_+|ABC-transporter-permease-subunit
MRKALVILHKEWLELRGERTLLMTVIVPPLLLTILPIVALYLIGSTPDEDTSQLGAVIADPSFAGLSEPEVGQALMGKQFGLMFLIMPLLVPATIASYSIVGEKMRRTLEPLLAAPVRTWELLLGKCLASLIPSLIITWGAAAVFVLALRLIVLSDRVYQVILGGGWWILLLLGSPSLALIMVAATVAISGRVNDPRTAQQVSAVVVVPLLALFIAQLLGVVVLTPLLALIASTALAFLAILAFAGAILLFERENILTRWAS
>NC_009523.1|WP_011959285.1|5784638_5785583_+|ABC-transporter-ATP-binding-protein
MHAIETWDLTRAFGDRVAVERLTFTAPRGAVFGFLGPNGAGKTTTVRMLAALIAPTSGSAVVAGYRLGEEDQDIRRNVGLLTESPGLYERLSARQNLIFFARLYDLDAARAEAQTERYLRMLGLWDRRDDPVGSFSKGMRQKLAIARALLHEPAIIFLDEPTAGLDPEAARTVREFIKELRAEGRTIFLTTHNLPEADELCDTIAVFRTRLLRIGAPDTLRAELFGSSTRIRVAGDATMFLDVVRALPFVRAAAASGDALTLSLDNPDEQNPILVQALIKAGAAIRYVEPREHSLEDVYLHLVREAEPIGQSHA
>NC_009523.1|WP_157041437.1|5783521_5784568_+|RNA-polymerase-sigma-factor-RpoD
MSETIDHILERTAGEPFDQTIDAFHADRDHEEDEALDRDFDADVESMGVDDPVRVYLREIGRVNLLTAQEEIMLAQQVERGEQASERLQKGDYAPSERLQLHRWVQEGQAARERLIQANLRLVVSIAKKYLGRGMSLLDLIQEGNIGLMRATEKFDYRKGYKFSTYATWWIRQAITRVIADQSRTIRLPVHVGETINRVMRASNRIQQTTGRDPTPDEIALELGIPVEKVRRVLEAARQTISLETPIGTEGDTVLADFIEDGKGVTPMDSASHHILREQIDSALEKLPERERRIIQLRYGLYDGHYRTLEEVGREFGITRERIRQIEARVLRKLRHPHYGRGLRGYLE
>NC_009523.1|WP_011959283.1|5782490_5783144_-|fructose-6-phosphate-aldolase
MQIYLDTANLDEIRTAASWGVLSGVTTNPSLMAKEKGADFKATIQEIASLVDGPISAETTALDADGMVREGREFAAWHPNVVVKVPSTTEGLKAVSRLAREGIRCNVTLCFNAIQALLAARAGAFIISPFVGRVDDVGVDGMDLIREIVQIYRQHRITTLVLAASIRHPRHIVEAALAGADIATCPFKVLEQSMRHPLTDIGIERFLADWKAWQQGK
>NC_009523.1|WP_011959282.1|5780422_5782447_-|transketolase
MTSTYTDLDWLAINTIRTLSIDAVQAASSGHPGMPLGAAPMAYVLWTRFLRFDPADPSWPDRDRFVLSAGHGSMLLYSLLHLTGYDLSLDELRRFRQWGSKTPGHPERHVTPGVEVSTGPLGQGFGNAVGMAIAEAFLAATYNRSGYTLFDHYTYAIVSDGDLMEGVAAEAASLAGHLKLGKLIYLYDDNRISLDGPTDLAFTEDVLLRFEAYGWHTARVDDGNDLDAIEAAIRAAQAVHDRPSLIAVRTTIGYGSPLAGTHRVHGSPLGVDGVRATKQALGWDPEATFFIPDEVRAYMRAARERGAALRADWQARFEAYAVAYPAEAQQLRQALAGTLPDGWEAQLPTFDPAGGDLATRDASGQTIQALYRAIPWMIGGSADLSESTKTPYTTTKSFQANARNERVIWFGVREHGMGAILNGMAAHGGVKPYGGTFLVFSDYMRGAIRLAALSHLPVIYVFTHDSIGLGEDGPTHQPVEHLAALRAVPNLWVIRPADANETVVAWQVALERSDGPTALILSRQKLPVFDRRASAAAGGVRRGAYVLRDADGGAPQIILMASGSEVALALAAQMALAARGVAARVVSFPSWELFALQPQEYRDTVLPPSVRARLAIEAGVSQGWERWVGDHGDCVSVETFGASAPYQVLFQQYGFTTDSIVARAMAVFERSAGC
>NC_009523.1|WP_041336158.1|5794068_5794386_+|divalent-cation-tolerance-protein-CutA
MNLIAVITTVGSVEDARKLATALVERQLAACAQISQIESVYRWKGAIQHEPEFRVLFKTTAARYQDVEEAIRALHPYELPAIHAFAIEHVYAPYGAWVEENSSAT
>NC_009523.1|WP_011959293.1|5794500_5795649_+|SagB/ThcOx-family-dehydrogenase
MKRLRHDVNALVSIALLVTTTIAILTGIIADVWDLTGFVFHTYAGYVMAALVMFHVALNWGRLRRYVYVRLFRSGSTARTRSPAFATVHPRRSTVEPSAPGIVRALHTRRGFLGVLIGGLAGLAIGRSTARVRLDVPFGTDLGVAYHQWSKPGMSDLFGAVASWGAQPPLYKTYPDSLRIMLPPPDDRPGLALETAIQQRRSVRHYSDEPLTLAELSRLLYYTGGINAERFGIKLRAAPSAGALYPIETYLAIHRVADLRPGVYHYNVADHSLSLIRDADVRGETVRHGLMQEFLGTCNAVVYFTVILQRLRWRYQERAYRYALLEAGHLAQNLYLAATSHGMGVCAVGAFLDDEVNAMLGVDGEREAAVYMLAVGKTRDRV
>NC_009523.1|WP_011959294.1|5795698_5797477_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MLRRLTCMVFIAAITLAGCAGPPPVPAPTAATLPTTSAPVNTATPAPLSPTPPVIPTTTPIPPTPTPTPALATFFDDRRLTYEPGFYAIQIQAFLDSHPGPLKRIVMPVGDRQHTFAEALTGQAIYYSVNPKIILALIELHSSLISDPQPTADQFVWAVGFRGENGRRRGLQAQVRWAVREMLYARRDYPQRVTLTFADGSVAPPTEEMSLAGYALARVLAPTTVPERLPGLMERFRSVYTNLFDDPRIPPDDWFPLSEPFLTRPIGKVVPVTSFFDHSGPFLMRNASDGVTTYWGRVETDPIFAYNGHDGWDYAAAPPERALAAADGEVVFAGNADDGCATRAVVIDHENGYRTLYWHLHRVDVAIGERVARGQSIGIIGNTGCSSGPHLHFGVQYLGRNTDPYGWCGMGEDPWRAHPAGTVSTWLWKDRPSPCAPPPDGAVAVDAGLPGFLIDGEGWNSAPVGYGGESLFIASVRGAGGRPWKVRPLNPPALAIWRATLPSAGKYRVIAFIPYAVSRLGDATNVRYLVQHADGTAEVIVDAATHANDWAELGTYTFDTTGAEVVLTSTAEDGMLSVWADVVMWLPVSPEE
>NC_009523.1|WP_157041441.1|5797623_5799582_+|GAF-domain-containing-protein
MLVEELRASLPNISEVIDQLAASQSNEQRRVLLRQLGALWFRQDGEPEVLAEFGLALSELHGVEPGVALSELLLAYGAAREEQRTREWESHLVRRMAELKGLHRIISAANSTLDLDTSMQLVVETVAEVIGVEVCSVYLYDKNTDDLTLRATHGLNSAAVGQVRIRIGEGITGWAAREGRPIAVRDVRREPRFHIEPGLGEEPYRSMLAVPIVLFSVERFHLGAAKLQGVITVQTYGPRDFTAEEINFVETVAGELAFFIVNAQLYQQTDEQLHQKVRELTTLQQVSKSIAEQLNLEEVLKLIVAKAVELSRAERADIFRVGNDGRLELAATYGGTPRGEIPGFIVQAVREARPLAVHNAFNDSRFPELAEVAARENFYSLFCMPLRVQQKRTIGAICLYTREARHFDYEHMRLLSTFADEAAIAIENARLYDESLRALAVKSAMLQEMHHRVRNNLQTISALLTMQQRRLPPNDRSAIALRDSVARIQAIAGVHNLLCHEDVGVTTVDAVARQIVESARLSLSSPERPVHFEIRGVQARVGSRDATVLAIVLNELIVNAMTHGLAVSGGVIIIETSEQDGMIAVEVRDDGPSRVASPESATAESSGGGSGLGLHIIRTLVQDDLQGEFSLTIGEEWTVARVRFPHHERDTQ
>NC_009523.1|WP_011959296.1|5799649_5800753_+|aminopeptidase-P-family-protein
MSHRITRIQEAMRRYGFDALAIVPGSNLRYLSGITLHAGLRLTLALTPVSGQPALVVPALEHARIAETTGALFRFYPWSDAEGPEQALARATRDVGLGAGSVIGIEHTVMRVFELRALEQALPGAQTADVTPLLMDMRMVKDAEELHAIRQAVRVIEDTLRQTIAQVRAGMRERDIADLWERAIRAAGCLPAFETTVASGPNSANPHHTSGDRVLQEGDLVVFDGGAVYQGYVSDITRTFAVGRLSDEALRIHHLVQAANTAGRIAAAQPGATGESIDTAARQIIEHGGYGAYFIHRTGHGIGLDIHEPPFIVAGNQAPLPVGATFTVEPGIYIRGLGGVRIEDDVVITADGAESLTTFPRDVQYLS
>NC_009523.1|WP_011959297.1|5801011_5801566_+|SMC-Scp-complex-subunit-ScpB
MEQSPLPDIPPQSAPTTVQLIEAILFVAGEPVTITELARTLDLPPDAVEQALDELAAACIERGIRLQRDADRVQLVSAPEAAAVIERFLGAPPATRLSNAALEVLTIIAYRQPVTRAQIEAIRGVDSSGVLRALLARDLIAEGGRLETVGRPILYVTTAGFLRQFGLSSLADLPPLDLPEPPSS

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	3647902-3647927	0	1.0
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	4768805-4768830	0	1.0
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	4768873-4768898	0	1.0
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	4768941-4768966	0	1.0
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	4769009-4769034	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	11070-11087	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	17617-17634	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	17808-17825	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	149778-149795	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	232634-232651	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	262443-262460	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	262511-262528	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	304363-304380	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	335898-335915	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	336209-336226	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	488009-488026	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	562489-562506	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	579678-579695	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	579746-579763	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	723878-723895	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	814493-814510	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	839841-839858	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	916929-916946	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1016438-1016455	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1257872-1257889	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1462411-1462428	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1467561-1467578	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1483947-1483964	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1634582-1634599	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1693653-1693670	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1731687-1731704	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1787198-1787215	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1787783-1787800	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1827446-1827463	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1829415-1829432	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1877141-1877158	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2137817-2137834	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2150396-2150413	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2230825-2230842	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2327116-2327133	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2351843-2351860	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2497918-2497935	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2520076-2520093	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2860940-2860957	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2861280-2861297	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3004138-3004155	0	1.0
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3282655-3282672	0	1.0
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NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792556-3792574	0	1.0
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5138226-5138244	0	1.0
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5506810-5506828	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1177597-1177618	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1818995-1819016	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1900522-1900543	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2451185-2451206	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2562812-2562833	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2563008-2563029	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2869468-2869489	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2869489-2869510	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	3792626-3792647	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	3792655-3792676	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	3792728-3792749	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	3792757-3792778	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	3792786-3792807	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	3792815-3792836	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	3792888-3792909	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4222825-4222846	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	5067524-5067545	0	1.0
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	5067559-5067580	0	1.0
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	5535822-5535843	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	282950-282971	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	3100985-3101006	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	3100999-3101020	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	3101013-3101034	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	3101063-3101084	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	3101098-3101119	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	363049-363070	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	363091-363112	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	1079847-1079868	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	3068688-3068709	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	3068702-3068723	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	3068758-3068779	0	1.0
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	5506814-5506835	0	1.0
NC_009523_30	30.2|1564760|22|NC_009523|CRISPRCasFinder	1564760-1564781	22	NC_009523.1	3101077-3101098	0	1.0
NC_009523_30	30.2|1564760|22|NC_009523|CRISPRCasFinder	1564760-1564781	22	NC_009523.1	1586052-1586073	0	1.0
NC_009523_30	30.3|1564809|22|NC_009523|CRISPRCasFinder	1564809-1564830	22	NC_009523.1	5265474-5265495	0	1.0
NC_009523_30	30.3|1564809|22|NC_009523|CRISPRCasFinder	1564809-1564830	22	NC_009523.1	1586045-1586066	0	1.0
NC_009523_30	30.3|1564809|22|NC_009523|CRISPRCasFinder	1564809-1564830	22	NC_009523.1	4655713-4655734	0	1.0
NC_009523_30	30.3|1564809|22|NC_009523|CRISPRCasFinder	1564809-1564830	22	NC_009523.1	4655857-4655878	0	1.0
NC_009523_30	30.3|1564809|22|NC_009523|CRISPRCasFinder	1564809-1564830	22	NC_009523.1	4655921-4655942	0	1.0
NC_009523_35	35.1|1889843|36|NC_009523|CRISPRCasFinder	1889843-1889878	36	NC_009523.1	4126071-4126106	0	1.0
NC_009523_48	48.1|2403838|44|NC_009523|CRISPRCasFinder	2403838-2403881	44	NC_009523.1	2327102-2327145	0	1.0
NC_009523_52	52.1|2630306|23|NC_009523|CRISPRCasFinder	2630306-2630328	23	NC_009523.1	2892190-2892212	0	1.0
NC_009523_52	52.1|2630306|23|NC_009523|CRISPRCasFinder	2630306-2630328	23	NC_009523.1	5328172-5328194	0	1.0
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_009523.1	487965-487993	0	1.0
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_009523.1	1770063-1770091	0	1.0
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_009523.1	2137773-2137801	0	1.0
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_009523.1	5135509-5135537	0	1.0
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_009523.1	5132772-5132800	0	1.0
NC_009523_63	63.1|3639507|40|NC_009523|CRISPRCasFinder	3639507-3639546	40	NC_009523.1	814515-814554	0	1.0
NC_009523_63	63.1|3639507|40|NC_009523|CRISPRCasFinder	3639507-3639546	40	NC_009523.1	983025-983064	0	1.0
NC_009523_63	63.1|3639507|40|NC_009523|CRISPRCasFinder	3639507-3639546	40	NC_009523.1	1525925-1525964	0	1.0
NC_009523_63	63.1|3639507|40|NC_009523|CRISPRCasFinder	3639507-3639546	40	NC_009523.1	2519675-2519714	0	1.0
NC_009523_63	63.1|3639507|40|NC_009523|CRISPRCasFinder	3639507-3639546	40	NC_009523.1	4452718-4452757	0	1.0
NC_009523_63	63.1|3639507|40|NC_009523|CRISPRCasFinder	3639507-3639546	40	NC_009523.1	4463024-4463063	0	1.0
NC_009523_63	63.1|3639507|40|NC_009523|CRISPRCasFinder	3639507-3639546	40	NC_009523.1	5327935-5327974	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1720709-1720727	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1722694-1722712	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1724924-1724942	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1821674-1821692	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1821724-1821742	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1821774-1821792	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1821789-1821807	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1821804-1821822	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1821819-1821837	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	1821834-1821852	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	2693347-2693365	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	2693362-2693380	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	4068468-4068486	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	4882185-4882203	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	4882200-4882218	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	4882259-4882277	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	43259-43277	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	710950-710968	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	710972-710990	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	764099-764117	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	2764168-2764186	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	4130748-4130766	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	4130791-4130809	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	4130848-4130866	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5300742-5300760	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5300757-5300775	0	1.0
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5300779-5300797	0	1.0
NC_009523_77	77.1|4182407|44|NC_009523|CRISPRCasFinder	4182407-4182450	44	NC_009523.1	771745-771788	0	1.0
NC_009523_79	79.1|4336423|42|NC_009523|CRISPRCasFinder	4336423-4336464	42	NC_009523.1	197733-197774	0	1.0
NC_009523_79	79.1|4336423|42|NC_009523|CRISPRCasFinder	4336423-4336464	42	NC_009523.1	197889-197930	0	1.0
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	17751-17792	0	1.0
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	723039-723080	0	1.0
NC_009523_84	84.1|4536942|40|NC_009523|CRISPRCasFinder	4536942-4536981	40	NC_009523.1	1257863-1257902	0	1.0
NC_009523_84	84.1|4536942|40|NC_009523|CRISPRCasFinder	4536942-4536981	40	NC_009523.1	4699923-4699962	0	1.0
NC_009523_84	84.1|4536942|40|NC_009523|CRISPRCasFinder	4536942-4536981	40	NC_009523.1	1462398-1462437	0	1.0
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	1483936-1483972	0	1.0
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	3496257-3496300	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	315070-315102	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	814456-814488	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	839795-839827	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	1498795-1498827	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	1721787-1721819	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	1731641-1731673	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	1827477-1827509	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	2036544-2036576	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	3652864-3652896	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	3687129-3687161	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4699895-4699927	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4961807-4961839	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5052454-5052486	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5100181-5100213	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5327865-5327897	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5328001-5328033	0	1.0
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5360974-5361006	0	1.0
NC_009523_95	95.1|5132689|44|NC_009523|CRISPRCasFinder	5132689-5132732	44	NC_009523.1	3647295-3647338	0	1.0
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	1483761-1483781	0	1.0
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	3676816-3676836	0	1.0
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1893952-1893969	0	1.0
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1894024-1894041	0	1.0
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1894092-1894109	0	1.0
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	3765546-3765563	0	1.0
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	3765588-3765605	0	1.0
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	4036583-4036600	0	1.0
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	1977472-1977498	1	0.963
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	2502082-2502108	1	0.963
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	4331613-4331639	1	0.963
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	4846759-4846785	1	0.963
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	5232439-5232465	1	0.963
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	5321622-5321648	1	0.963
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	584902-584927	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	585038-585063	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	1140549-1140574	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	1140617-1140642	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	1140685-1140710	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	2520083-2520108	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	3421876-3421901	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	3562719-3562744	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	3925249-3925274	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	4336467-4336492	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	5194044-5194069	1	0.962
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	5558195-5558220	1	0.962
NC_009523_6	6.3|522477|18|NC_009523|CRT	522477-522494	18	NC_009523.1	3922809-3922826	1	0.944
NC_009523_6	6.3|522477|18|NC_009523|CRT	522477-522494	18	NC_009523.1	5168043-5168060	1	0.944
NC_009523_6	6.3|522477|18|NC_009523|CRT	522477-522494	18	NC_009523.1	517190-517207	1	0.944
NC_009523_6	6.3|522477|18|NC_009523|CRT	522477-522494	18	NC_009523.1	1764786-1764803	1	0.944
NC_009523_7	7.1|687491|44|NC_009523|CRISPRCasFinder	687491-687534	44	NC_009523.1	687422-687465	1	0.977
NC_009523_7	7.1|687491|44|NC_009523|CRISPRCasFinder	687491-687534	44	NC_009523.1	687563-687606	1	0.977
NC_009523_10	10.1|907544|40|NC_009523|CRISPRCasFinder	907544-907583	40	NC_009523.1	906371-906410	1	0.975
NC_009523_10	10.1|907544|40|NC_009523|CRISPRCasFinder	907544-907583	40	NC_009523.1	906437-906476	1	0.975
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	149846-149863	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	197788-197805	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	197944-197961	1	0.944
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NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	268633-268650	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	315116-315133	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	536399-536416	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	551413-551430	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	723006-723023	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	771757-771774	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	782266-782283	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	808647-808664	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	991771-991788	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1000129-1000146	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1075425-1075442	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1075493-1075510	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1075561-1075578	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1091771-1091788	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1140542-1140559	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1140610-1140627	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1140678-1140695	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1498764-1498781	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1525903-1525920	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	1877209-1877226	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2623730-2623747	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2860872-2860889	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	2884834-2884851	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3002748-3002765	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3003582-3003599	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3460967-3460984	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3484893-3484910	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3562734-3562751	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3851110-3851127	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3913879-3913896	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	3919785-3919802	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	4102993-4103010	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	4454090-4454107	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	4707405-4707422	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	5052500-5052517	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	5193969-5193986	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	5327979-5327996	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	5469640-5469657	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	5469708-5469725	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	5469776-5469793	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	5585989-5586006	1	0.944
NC_009523_19	19.1|1257741|18|NC_009523|PILER-CR	1257741-1257758	18	NC_009523.1	5586057-5586074	1	0.944
NC_009523_26	26.1|1560886|22|NC_009523|CRISPRCasFinder	1560886-1560907	22	NC_009523.1	1560844-1560865	1	0.955
NC_009523_26	26.1|1560886|22|NC_009523|CRISPRCasFinder	1560886-1560907	22	NC_009523.1	1560928-1560949	1	0.955
NC_009523_26	26.1|1560886|22|NC_009523|CRISPRCasFinder	1560886-1560907	22	NC_009523.1	1560949-1560970	1	0.955
NC_009523_26	26.1|1560886|22|NC_009523|CRISPRCasFinder	1560886-1560907	22	NC_009523.1	1560991-1561012	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	31001-31022	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	282943-282964	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	363056-363077	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	522532-522553	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	611192-611213	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	1505751-1505772	1	0.955
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NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5571175-5571196	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5571182-5571203	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5572945-5572966	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5572959-5572980	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5572973-5572994	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5572987-5573008	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5573001-5573022	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5573015-5573036	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5573022-5573043	1	0.955
NC_009523_27	27.2|1561096|22|NC_009523|CRISPRCasFinder	1561096-1561117	22	NC_009523.1	5573043-5573064	1	0.955
NC_009523_28	28.1|1561781|22|NC_009523|CRISPRCasFinder	1561781-1561802	22	NC_009523.1	5138002-5138023	1	0.955
NC_009523_28	28.1|1561781|22|NC_009523|CRISPRCasFinder	1561781-1561802	22	NC_009523.1	5138068-5138089	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	611199-611220	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1164800-1164821	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1485414-1485435	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1485421-1485442	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1485428-1485449	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1485471-1485492	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1505666-1505687	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1505673-1505694	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1505680-1505701	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1538527-1538548	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1586038-1586059	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	1687769-1687790	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2390305-2390326	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2390312-2390333	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2526073-2526094	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2526080-2526101	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2526275-2526296	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2526317-2526338	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2526345-2526366	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2526373-2526394	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2526401-2526422	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2538127-2538148	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2538134-2538155	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2538141-2538162	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2538148-2538169	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2538155-2538176	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2538183-2538204	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2538190-2538211	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2538197-2538218	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	3068716-3068737	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	3068772-3068793	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	3117399-3117420	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	3502714-3502735	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	3502721-3502742	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4020385-4020406	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4020392-4020413	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4020399-4020420	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4995896-4995917	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4995903-4995924	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4995939-4995960	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4995946-4995967	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4995982-4996003	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5075089-5075110	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5137952-5137973	1	0.955
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5767642-5767663	1	0.955
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	43248-43266	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	611199-611217	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	711019-711037	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	711056-711074	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	889934-889952	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485308-1485326	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485414-1485432	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485421-1485439	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485428-1485446	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485471-1485489	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1538527-1538545	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1573675-1573693	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1573689-1573707	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1573703-1573721	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1573731-1573749	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1573760-1573778	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687622-1687640	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687699-1687717	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687727-1687745	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687769-1687787	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1971399-1971417	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2451134-2451152	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2451156-2451174	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2451207-2451225	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538127-2538145	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538134-2538152	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538141-2538159	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538148-2538166	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538155-2538173	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538162-2538180	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538183-2538201	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538190-2538208	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538197-2538215	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3101034-3101052	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3117346-3117364	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3117399-3117417	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3117406-3117424	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3329121-3329139	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3471343-3471361	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3502714-3502732	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3502721-3502739	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3502728-3502746	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3765428-3765446	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3765540-3765558	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3765582-3765600	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3998946-3998964	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3998968-3998986	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3998990-3999008	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3999012-3999030	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3999034-3999052	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4020385-4020403	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4020392-4020410	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4020399-4020417	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4182339-4182357	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4352079-4352097	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4651943-4651961	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4922068-4922086	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4995896-4995914	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4995903-4995921	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4995910-4995928	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4995939-4995957	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4995946-4995964	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4995953-4995971	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4995982-4996000	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4995989-4996007	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5075089-5075107	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5075096-5075114	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5082831-5082849	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5168019-5168037	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5232273-5232291	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5244170-5244188	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5265481-5265499	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5502257-5502275	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5767642-5767660	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	517192-517210	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	921893-921911	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1080049-1080067	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1164803-1164821	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1164817-1164835	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1505669-1505687	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1505676-1505694	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1505683-1505701	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1564862-1564880	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1586041-1586059	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1586120-1586138	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1679165-1679183	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1722542-1722560	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1722570-1722588	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724698-1724716	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724758-1724776	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724825-1724843	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724847-1724865	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724869-1724887	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724891-1724909	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1872734-1872752	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1900703-1900721	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2390301-2390319	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2390308-2390326	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2390315-2390333	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2525992-2526010	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526069-2526087	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526076-2526094	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526083-2526101	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526097-2526115	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526278-2526296	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526313-2526331	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526341-2526359	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526369-2526387	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526397-2526415	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2547909-2547927	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2547923-2547941	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2547937-2547955	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2547951-2547969	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2562837-2562855	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2562928-2562946	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2563033-2563051	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2693373-2693391	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3230075-3230093	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3230133-3230151	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3230191-3230209	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3230249-3230267	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3487113-3487131	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3695989-3696007	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3696003-3696021	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792578-3792596	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792607-3792625	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792636-3792654	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792665-3792683	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792687-3792705	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792709-3792727	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792738-3792756	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792767-3792785	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792796-3792814	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792825-3792843	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792847-3792865	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3792869-3792887	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4068479-4068497	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4491578-4491596	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655745-4655763	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655774-4655792	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655896-4655914	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655953-4655971	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655982-4656000	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4656011-4656029	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4656040-4656058	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4656069-4656087	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4657030-4657048	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4756234-4756252	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4882219-4882237	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5067569-5067587	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5137955-5137973	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5138050-5138068	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5138123-5138141	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5506845-5506863	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5550553-5550571	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5550634-5550652	1	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5550723-5550741	1	0.947
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	764052-764073	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	889836-889857	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1679318-1679339	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1679346-1679367	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1764913-1764934	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1770251-1770272	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2480233-2480254	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2480254-2480275	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2768228-2768249	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2869510-2869531	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2869524-2869545	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2869545-2869566	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2869559-2869580	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2869580-2869601	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2869594-2869615	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	3792597-3792618	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4116967-4116988	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4182091-4182112	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4438224-4438245	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4438259-4438280	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4656838-4656859	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4656859-4656880	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4656908-4656929	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4656943-4656964	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	4656992-4657013	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	5232245-5232266	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	5535864-5535885	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	5572938-5572959	1	0.955
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	5573036-5573057	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	2869482-2869503	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	2869503-2869524	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	2869538-2869559	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	2869573-2869594	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	1290359-1290380	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	2562798-2562819	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	2562896-2562917	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	2562980-2563001	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	2669455-2669476	1	0.955
NC_009523_29	29.3|1563436|22|NC_009523|CRISPRCasFinder	1563436-1563457	22	NC_009523.1	4222811-4222832	1	0.955
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	711012-711033	1	0.955
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	822954-822975	1	0.955
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	1538520-1538541	1	0.955
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	1971462-1971483	1	0.955
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	2314272-2314293	1	0.955
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_009523.1	2314301-2314322	1	0.955
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NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5067480-5067498	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5067502-5067520	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5538545-5538563	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5550601-5550619	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5550616-5550634	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5550690-5550708	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5550705-5550723	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5551598-5551616	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	43193-43211	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	43215-43233	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	282834-282852	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	282849-282867	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	282864-282882	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	282879-282897	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	282894-282912	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	282917-282935	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	282932-282950	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	3998920-3998938	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5265492-5265510	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5267193-5267211	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5267208-5267226	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5549974-5549992	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5549989-5550007	1	0.947
NC_009523_76	76.2|4112145|19|NC_009523|CRISPRCasFinder	4112145-4112163	19	NC_009523.1	5550004-5550022	1	0.947
NC_009523_77	77.1|4182407|44|NC_009523|CRISPRCasFinder	4182407-4182450	44	NC_009523.1	1483933-1483976	1	0.977
NC_009523_79	79.1|4336423|42|NC_009523|CRISPRCasFinder	4336423-4336464	42	NC_009523.1	991802-991843	1	0.976
NC_009523_79	79.1|4336423|42|NC_009523|CRISPRCasFinder	4336423-4336464	42	NC_009523.1	1132335-1132376	1	0.976
NC_009523_79	79.1|4336423|42|NC_009523|CRISPRCasFinder	4336423-4336464	42	NC_009523.1	2622529-2622570	1	0.976
NC_009523_79	79.1|4336423|42|NC_009523|CRISPRCasFinder	4336423-4336464	42	NC_009523.1	3496257-3496298	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	487952-487993	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	1770050-1770091	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	2137760-2137801	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	2192309-2192350	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	2623741-2623782	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	1195349-1195390	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	2891821-2891862	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	3064485-3064526	1	0.976
NC_009523_81	81.1|4371360|42|NC_009523|CRISPRCasFinder	4371360-4371401	42	NC_009523.1	5132772-5132813	1	0.976
NC_009523_84	84.1|4536942|40|NC_009523|CRISPRCasFinder	4536942-4536981	40	NC_009523.1	1827437-1827476	1	0.975
NC_009523_84	84.1|4536942|40|NC_009523|CRISPRCasFinder	4536942-4536981	40	NC_009523.1	3652892-3652931	1	0.975
NC_009523_84	84.1|4536942|40|NC_009523|CRISPRCasFinder	4536942-4536981	40	NC_009523.1	4126061-4126100	1	0.975
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	232626-232662	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	536388-536424	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	771749-771785	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	1787772-1787808	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	1877198-1877234	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	2230814-2230850	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	2327105-2327141	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	2825376-2825412	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	4859233-4859269	1	0.973
NC_009523_88	88.1|4772949|37|NC_009523|CRISPRCasFinder	4772949-4772985	37	NC_009523.1	5132663-5132699	1	0.973
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	197733-197776	1	0.977
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	197889-197932	1	0.977
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	2623675-2623718	1	0.977
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	3484767-3484810	1	0.977
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	4327516-4327559	1	0.977
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	4483966-4484009	1	0.977
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	5095970-5096013	1	0.977
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	1829439-1829482	1	0.977
NC_009523_92	92.1|5096038|44|NC_009523|CRISPRCasFinder	5096038-5096081	44	NC_009523.1	2884863-2884906	1	0.977
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	782288-782320	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	814524-814556	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	983023-983055	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	1462365-1462397	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	1467515-1467547	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	1498727-1498759	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	1525934-1525966	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	2403881-2403913	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	2519684-2519716	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	3386464-3386496	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4126028-4126060	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4126096-4126128	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4452716-4452748	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4463033-4463065	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4483975-4484007	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4772988-4773020	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5103430-5103462	1	0.97
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5327933-5327965	1	0.97
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	473310-473330	1	0.952
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	475098-475118	1	0.952
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	1764455-1764475	1	0.952
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	4768427-4768447	1	0.952
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	4768634-4768654	1	0.952
NC_009523_98	98.2|5230866|21|NC_009523|CRT	5230866-5230886	21	NC_009523.1	2229546-2229566	1	0.952
NC_009523_98	98.2|5230866|21|NC_009523|CRT	5230866-5230886	21	NC_009523.1	3173632-3173652	1	0.952
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1356211-1356228	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1586050-1586067	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1724589-1724606	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1724611-1724628	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1724633-1724650	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1724722-1724739	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	1724782-1724799	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	2368454-2368471	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	2536181-2536198	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	3101083-3101100	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	4655884-4655901	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	4656064-4656081	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	4756309-4756326	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	4806587-4806604	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	4922106-4922123	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	5265473-5265490	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	5267269-5267286	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	5550577-5550594	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	5550629-5550646	1	0.944
NC_009523_99	99.5|5244497|18|NC_009523|CRT	5244497-5244514	18	NC_009523.1	5550718-5550735	1	0.944
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	262526-262563	1	0.974
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	335950-335976	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	487993-488019	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	814500-814526	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	916936-916962	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	988101-988127	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	1195323-1195349	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	1877125-1877151	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	2137801-2137827	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	2519660-2519686	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	2543501-2543527	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	2891795-2891821	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	3282639-3282665	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	3715460-3715486	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	4452746-4452772	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	4463009-4463035	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	5132746-5132772	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	5230689-5230715	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	5616994-5617020	2	0.926
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	NC_009523.1	5645119-5645145	2	0.926
NC_009523_4	4.1|398312|20|NC_009523|CRISPRCasFinder	398312-398331	20	NC_009523.1	4370993-4371012	2	0.9
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	186691-186716	2	0.923
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	304639-304664	2	0.923
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	335640-335665	2	0.923
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	335951-335976	2	0.923
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NC_009523.1	1091710-1091735	2	0.923
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NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	3765575-3765596	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	3765589-3765610	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4756224-4756245	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	4806595-4806616	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5082936-5082957	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5138230-5138251	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5173190-5173211	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5232273-5232294	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5267277-5267298	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5502285-5502306	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5506807-5506828	2	0.909
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	5767649-5767670	2	0.909
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	889864-889882	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485273-1485291	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485280-1485298	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485287-1485305	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485294-1485312	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485301-1485319	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485315-1485333	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485322-1485340	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485329-1485347	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485336-1485354	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485343-1485361	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485350-1485368	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485357-1485375	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485378-1485396	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1485407-1485425	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1573661-1573679	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687636-1687654	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687664-1687682	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687671-1687689	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687685-1687703	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1687741-1687759	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1893946-1893964	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1894158-1894176	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1905018-1905036	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2016937-2016955	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2451178-2451196	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538169-2538187	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2538176-2538194	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3101084-3101102	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3667702-3667720	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3765449-3765467	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3765491-3765509	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3765575-3765593	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3765596-3765614	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3771934-3771952	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3922820-3922838	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4130730-4130748	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4182143-4182161	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4306760-4306778	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4352107-4352125	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4727053-4727071	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4806588-4806606	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5082908-5082926	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5082936-5082954	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5265474-5265492	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5267241-5267259	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5267270-5267288	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	363073-363091	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	363283-363301	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	363332-363350	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	363416-363434	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1238511-1238529	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1356187-1356205	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1356209-1356227	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1356246-1356264	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1505719-1505737	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1505740-1505758	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1562023-1562041	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1586048-1586066	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1679129-1679147	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724587-1724605	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724609-1724627	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724631-1724649	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724720-1724738	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1724780-1724798	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1821641-1821659	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2390287-2390305	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2390294-2390312	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526027-2526045	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526292-2526310	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	2526425-2526443	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3068613-3068631	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3068663-3068681	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3068670-3068688	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3068726-3068744	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3068733-3068751	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3068740-3068758	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3471403-3471421	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3498109-3498127	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	3695975-3695993	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4067432-4067450	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4067502-4067520	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4067544-4067562	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655716-4655734	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655788-4655806	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655802-4655820	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655860-4655878	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4655924-4655942	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	4756227-4756245	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042178-5042196	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042318-5042336	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042403-5042421	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042431-5042449	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042459-5042477	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042487-5042505	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042544-5042562	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042600-5042618	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5042628-5042646	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5137984-5138002	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5550575-5550593	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5550627-5550645	2	0.895
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	5550716-5550734	2	0.895
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	363077-363098	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	889850-889871	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1679213-1679234	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1679297-1679318	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1679304-1679325	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1764934-1764955	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	1900558-1900579	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2238846-2238867	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2238853-2238874	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2238881-2238902	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2238895-2238916	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2373235-2373256	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2373249-2373270	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2373263-2373284	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2480289-2480310	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2562994-2563015	2	0.909
NC_009523_29	29.2|1563387|22|NC_009523|CRISPRCasFinder	1563387-1563408	22	NC_009523.1	2669483-2669504	2	0.909
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NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4462965-4462997	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4543408-4543440	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4587775-4587807	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4684332-4684364	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4699963-4699995	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4706687-4706719	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4846783-4846815	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	4978328-4978360	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5230713-5230745	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5321592-5321624	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5469807-5469839	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5586020-5586052	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5586088-5586120	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5645089-5645121	2	0.939
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_009523.1	5754458-5754490	2	0.939
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	487823-487843	2	0.905
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	560904-560924	2	0.905
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	1467422-1467442	2	0.905
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	2884969-2884989	2	0.905
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	4429753-4429773	2	0.905
NC_009523_98	98.1|5230818|21|NC_009523|CRT	5230818-5230838	21	NC_009523.1	4573930-4573950	2	0.905
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	1724582-1724605	2	0.917
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	1724604-1724627	2	0.917
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	1724626-1724649	2	0.917
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	1724715-1724738	2	0.917
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	1724775-1724798	2	0.917
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	1900698-1900721	2	0.917
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	5550570-5550593	2	0.917
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	5550622-5550645	2	0.917
NC_009523_99	99.1|5244235|24|NC_009523|CRT	5244235-5244258	24	NC_009523.1	5550711-5550734	2	0.917
NC_009523_99	99.2|5244293|31|NC_009523|CRT	5244293-5244323	31	NC_009523.1	4352086-4352116	2	0.935
NC_009523_99	99.2|5244293|31|NC_009523|CRT	5244293-5244323	31	NC_009523.1	5571166-5571196	2	0.935
NC_009523_100	100.1|5261334|25|NC_009523|CRISPRCasFinder	5261334-5261358	25	NC_009523.1	3654599-3654623	2	0.92
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	262458-262495	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	630203-630240	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	782281-782318	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1462358-1462395	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1462426-1462463	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1467508-1467545	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1634529-1634566	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	2351790-2351827	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	3004085-3004122	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	3386457-3386494	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	3639430-3639467	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	4141369-4141406	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	723911-723948	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1341226-1341263	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1341284-1341321	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1342151-1342188	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1342564-1342601	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1498729-1498766	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	1951134-1951171	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	2403883-2403920	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	3654503-3654540	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	3851143-3851180	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	3868016-3868053	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	4331707-4331744	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	4699829-4699866	2	0.947
NC_009523_104	104.1|5495174|38|NC_009523|CRISPRCasFinder	5495174-5495211	38	NC_009523.1	4772990-4773027	2	0.947
NC_009523_28	28.5|1561974|19|NC_009523|CRISPRCasFinder	1561974-1561992	19	NC_009523.1	1905046-1905064	5	0.737
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_009523.1	2536182-2536203	6	0.727

1. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3647902-3647927, mismatch: 0, identity: 1.0

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatacataatccgcca	Protospacer
**************************

2. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 4768805-4768830, mismatch: 0, identity: 1.0

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatacataatccgcca	Protospacer
**************************

3. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 4768873-4768898, mismatch: 0, identity: 1.0

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatacataatccgcca	Protospacer
**************************

4. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 4768941-4768966, mismatch: 0, identity: 1.0

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatacataatccgcca	Protospacer
**************************

5. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 4769009-4769034, mismatch: 0, identity: 1.0

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatacataatccgcca	Protospacer
**************************

6. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 11070-11087, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

7. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 17617-17634, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

8. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 17808-17825, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

9. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 149778-149795, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

10. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 232634-232651, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

11. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 262443-262460, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

12. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 262511-262528, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

13. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 304363-304380, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

14. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 335898-335915, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

15. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 336209-336226, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

16. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 488009-488026, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

17. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 562489-562506, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

18. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 579678-579695, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

19. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 579746-579763, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

20. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 723878-723895, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

21. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 814493-814510, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

22. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 839841-839858, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

23. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 916929-916946, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

24. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1016438-1016455, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

25. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1257872-1257889, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

26. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1462411-1462428, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

27. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1467561-1467578, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

28. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1483947-1483964, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

29. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1634582-1634599, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

30. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1693653-1693670, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

31. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1731687-1731704, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

32. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1787198-1787215, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

33. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1787783-1787800, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

34. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1827446-1827463, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

35. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1829415-1829432, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

36. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1877141-1877158, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

37. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2137817-2137834, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

38. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2150396-2150413, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

39. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2230825-2230842, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

40. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2327116-2327133, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

41. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2351843-2351860, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

42. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2497918-2497935, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

43. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2520076-2520093, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

44. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2860940-2860957, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

45. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2861280-2861297, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

46. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3004138-3004155, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

47. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3282655-3282672, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

48. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3398019-3398036, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

49. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3421823-3421840, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

50. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3421891-3421908, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

51. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3484754-3484771, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

52. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3484822-3484839, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

53. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3496312-3496329, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

54. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3496379-3496396, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

55. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3496656-3496673, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

56. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3550436-3550453, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

57. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3550504-3550521, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

58. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3652901-3652918, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

59. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3654470-3654487, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

60. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3678097-3678114, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

61. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3687098-3687115, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

62. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3852391-3852408, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

63. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4093412-4093429, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

64. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4093480-4093497, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

65. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4126074-4126091, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

66. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4331606-4331623, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

67. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4331674-4331691, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

68. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4366109-4366126, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

69. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4429437-4429454, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

70. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4463002-4463019, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

71. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4699864-4699881, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

72. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4699932-4699949, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

73. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4859241-4859258, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

74. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4978297-4978314, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

75. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5064246-5064263, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

76. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5194037-5194054, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

77. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5230682-5230699, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

78. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5232432-5232449, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

79. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5327911-5327928, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

80. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5328047-5328064, mismatch: 0, identity: 1.0

agggcttatggtctttga	CRISPR spacer
agggcttatggtctttga	Protospacer
******************

81. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 11070-11085, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

82. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 17617-17632, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

83. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 17808-17823, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

84. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 149780-149795, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

85. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 232636-232651, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

86. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 262443-262458, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

87. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 262511-262526, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

88. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 304363-304378, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

89. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 335898-335913, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

90. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 336209-336224, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

91. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 488009-488024, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

92. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 562489-562504, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

93. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 562557-562572, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

94. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 579680-579695, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

95. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 579748-579763, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

96. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 584897-584912, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

97. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 584965-584980, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

98. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 585033-585048, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

99. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 723880-723895, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

100. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 814495-814510, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

101. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 839841-839856, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

102. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 916931-916946, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

103. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1016440-1016455, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

104. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1257874-1257889, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

105. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1462411-1462426, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

106. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1467561-1467576, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

107. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1483947-1483962, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

108. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1634582-1634597, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

109. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1693655-1693670, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

110. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1731687-1731702, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

111. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1787198-1787213, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

112. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1787783-1787798, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

113. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1827448-1827463, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

114. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1829417-1829432, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

115. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1857595-1857610, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

116. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1857663-1857678, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

117. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 1877141-1877156, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

118. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2137817-2137832, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

119. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2150398-2150413, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

120. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2230825-2230840, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

121. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2327116-2327131, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

122. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2351843-2351858, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

123. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2491935-2491950, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

124. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2497920-2497935, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

125. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2502077-2502092, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

126. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2520078-2520093, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

127. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2572653-2572668, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

128. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2825386-2825401, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

129. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2860942-2860957, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

130. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 2861282-2861297, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

131. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3004138-3004153, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

132. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3282655-3282670, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

133. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3398021-3398036, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

134. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3421823-3421838, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

135. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3421891-3421906, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

136. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3484754-3484769, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

137. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3484822-3484837, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

138. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3496312-3496327, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

139. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3496379-3496394, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

140. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3496656-3496671, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

141. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3550436-3550451, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

142. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3550504-3550519, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

143. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3652903-3652918, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

144. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3654472-3654487, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

145. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3678097-3678112, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

146. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3687100-3687115, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

147. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3852393-3852408, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

148. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 3867985-3868000, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

149. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4093412-4093427, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

150. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4093480-4093495, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

151. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4126074-4126089, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

152. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4331608-4331623, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

153. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4331676-4331691, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

154. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4366109-4366124, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

155. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4429437-4429452, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

156. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4463004-4463019, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

157. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4699866-4699881, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

158. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4699934-4699949, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

159. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4859243-4859258, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

160. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 4978299-4978314, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

161. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 5064246-5064261, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

162. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 5194039-5194054, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

163. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 5230684-5230699, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

164. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 5232434-5232449, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

165. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 5327911-5327926, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

166. spacer 19.2|1257811|16|NC_009523|PILER-CR matches to position: 5328047-5328062, mismatch: 0, identity: 1.0

ggcttatggtctttga	CRISPR spacer
ggcttatggtctttga	Protospacer
****************

167. spacer 20.1|1294504|40|NC_009523|CRISPRCasFinder matches to position: 1294402-1294441, mismatch: 0, identity: 1.0

gcgcaggcgggcttcgcaccacatagccgaggggttatcg	CRISPR spacer
gcgcaggcgggcttcgcaccacatagccgaggggttatcg	Protospacer
****************************************

168. spacer 26.1|1560886|22|NC_009523|CRISPRCasFinder matches to position: 1560970-1560991, mismatch: 0, identity: 1.0

gttccacctgccacgcccgacg	CRISPR spacer
gttccacctgccacgcccgacg	Protospacer
**********************

169. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 20603-20624, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

170. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 30952-30973, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

171. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 30959-30980, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

172. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 30966-30987, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

173. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 30973-30994, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

174. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 30980-31001, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

175. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 30987-31008, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

176. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 30994-31015, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

177. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 73091-73112, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

178. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 363378-363399, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

179. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 363385-363406, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

180. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 363441-363462, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

181. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 522518-522539, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

182. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 522525-522546, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

183. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 710983-711004, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

184. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 711063-711084, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

185. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 917877-917898, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

186. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 921876-921897, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

187. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 921883-921904, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

188. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1177604-1177625, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

189. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1177611-1177632, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

190. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1290388-1290409, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

191. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1290395-1290416, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

192. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1562006-1562027, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

193. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1562013-1562034, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

194. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1770223-1770244, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

195. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1770230-1770251, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

196. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1770258-1770279, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

197. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1821689-1821710, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

198. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1821696-1821717, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

199. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1821703-1821724, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

200. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1821710-1821731, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

201. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1821739-1821760, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

202. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1821746-1821767, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

203. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1821753-1821774, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

204. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1821760-1821781, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

205. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1893914-1893935, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

206. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1971420-1971441, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

207. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1971427-1971448, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

208. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1971434-1971455, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

209. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1971441-1971462, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

210. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1971448-1971469, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

211. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1971455-1971476, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

212. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2314244-2314265, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

213. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2314251-2314272, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

214. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2314258-2314279, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

215. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2314265-2314286, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

216. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2669441-2669462, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

217. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2669448-2669469, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

218. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2677706-2677727, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

219. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2677713-2677734, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

220. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2677720-2677741, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

221. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2677727-2677748, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

222. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2765653-2765674, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

223. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2765660-2765681, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

224. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2765667-2765688, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

225. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2842004-2842025, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

226. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2842011-2842032, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

227. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 3329128-3329149, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

228. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 3329135-3329156, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

229. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 3922792-3922813, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

230. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4018551-4018572, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

231. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4068454-4068475, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

232. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4112174-4112195, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

233. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4116974-4116995, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

234. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4182150-4182171, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

235. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4222832-4222853, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

236. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4222874-4222895, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

237. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4491554-4491575, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

238. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4491561-4491582, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

239. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4491568-4491589, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

240. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656950-4656971, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

241. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656957-4656978, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

242. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656999-4657020, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

243. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4657006-4657027, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

244. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4657013-4657034, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

245. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4657020-4657041, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

246. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4882245-4882266, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

247. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5067452-5067473, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

248. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5067459-5067480, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

249. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5067466-5067487, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

250. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5082838-5082859, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

251. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5136962-5136983, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

252. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5136969-5136990, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

253. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5136976-5136997, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

254. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5136983-5137004, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

255. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5136990-5137011, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

256. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5136997-5137018, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

257. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5137004-5137025, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

258. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5137011-5137032, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

259. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5137018-5137039, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

260. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5138082-5138103, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

261. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5168026-5168047, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

262. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5217058-5217079, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

263. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5232231-5232252, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

264. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5232238-5232259, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

265. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5506835-5506856, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

266. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5506870-5506891, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

267. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5506877-5506898, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

268. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5506884-5506905, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

269. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5538613-5538634, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

270. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5538620-5538641, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

271. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5538627-5538648, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

272. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5538664-5538685, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

273. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5538671-5538692, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

274. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5538708-5538729, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

275. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5538715-5538736, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

276. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5538722-5538743, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

277. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5573029-5573050, mismatch: 0, identity: 1.0

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
**********************

278. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3101084-3101105, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaacgttcaacg	Protospacer
**********************

279. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4806588-4806609, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaacgttcaacg	Protospacer
**********************

280. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5267270-5267291, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaacgttcaacg	Protospacer
**********************

281. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 282957-282975, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

282. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3100978-3100996, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

283. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3100992-3101010, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

284. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3101006-3101024, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

285. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3101020-3101038, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

286. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3101070-3101088, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

287. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3101091-3101109, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

288. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3101105-3101123, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

289. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3117197-3117215, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

290. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3117219-3117237, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

291. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3117241-3117259, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

292. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3117311-3117329, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

293. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4806595-4806613, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

294. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5267277-5267295, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

295. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 240543-240561, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

296. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 363045-363063, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

297. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 363087-363105, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

298. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2547880-2547898, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

299. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2562746-2562764, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

300. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068684-3068702, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

301. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068698-3068716, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

302. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068712-3068730, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

303. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068754-3068772, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

304. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068768-3068786, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

305. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792556-3792574, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

306. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5138226-5138244, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

307. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5506810-5506828, mismatch: 0, identity: 1.0

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaacg	Protospacer
*******************

308. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1177597-1177618, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

309. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1818995-1819016, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

310. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1900522-1900543, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

311. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2451185-2451206, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

312. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2562812-2562833, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

313. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2563008-2563029, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

314. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2869468-2869489, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

315. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2869489-2869510, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

316. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3792626-3792647, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

317. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3792655-3792676, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

318. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3792728-3792749, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

319. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3792757-3792778, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

320. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3792786-3792807, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

321. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3792815-3792836, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

322. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3792888-3792909, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

323. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4222825-4222846, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

324. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5067524-5067545, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

325. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5067559-5067580, mismatch: 0, identity: 1.0

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttcaacc	Protospacer
**********************

326. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 5535822-5535843, mismatch: 0, identity: 1.0

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccccaaacc	Protospacer
**********************

327. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 282950-282971, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

328. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3100985-3101006, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

329. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3100999-3101020, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

330. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3101013-3101034, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

331. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3101063-3101084, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

332. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3101098-3101119, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

333. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 363049-363070, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

334. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 363091-363112, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

335. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1079847-1079868, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

336. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3068688-3068709, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

337. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3068702-3068723, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

338. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3068758-3068779, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

339. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5506814-5506835, mismatch: 0, identity: 1.0

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgttcaacc	Protospacer
**********************

340. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 3101077-3101098, mismatch: 0, identity: 1.0

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaacgttcaacc	Protospacer
**********************

341. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1586052-1586073, mismatch: 0, identity: 1.0

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaacgttcaacc	Protospacer
**********************

342. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5265474-5265495, mismatch: 0, identity: 1.0

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgttcaacg	Protospacer
**********************

343. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1586045-1586066, mismatch: 0, identity: 1.0

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgttcaacg	Protospacer
**********************

344. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4655713-4655734, mismatch: 0, identity: 1.0

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgttcaacg	Protospacer
**********************

345. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4655857-4655878, mismatch: 0, identity: 1.0

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgttcaacg	Protospacer
**********************

346. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4655921-4655942, mismatch: 0, identity: 1.0

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgttcaacg	Protospacer
**********************

347. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 4126071-4126106, mismatch: 0, identity: 1.0

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgccctggatagccgagggcttatggtctttgaaga	Protospacer
************************************

348. spacer 48.1|2403838|44|NC_009523|CRISPRCasFinder matches to position: 2327102-2327145, mismatch: 0, identity: 1.0

attccatagccgagggcttatggtctttgaataaataatccggt	CRISPR spacer
attccatagccgagggcttatggtctttgaataaataatccggt	Protospacer
********************************************

349. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 2892190-2892212, mismatch: 0, identity: 1.0

tcgatagccgatagccgatagcc	CRISPR spacer
tcgatagccgatagccgatagcc	Protospacer
***********************

350. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 5328172-5328194, mismatch: 0, identity: 1.0

tcgatagccgatagccgatagcc	CRISPR spacer
tcgatagccgatagccgatagcc	Protospacer
***********************

351. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 487965-487993, mismatch: 0, identity: 1.0

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcaaggcgaagcccgcctgcgcgggctg	Protospacer
*****************************

352. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 1770063-1770091, mismatch: 0, identity: 1.0

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcaaggcgaagcccgcctgcgcgggctg	Protospacer
*****************************

353. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 2137773-2137801, mismatch: 0, identity: 1.0

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcaaggcgaagcccgcctgcgcgggctg	Protospacer
*****************************

354. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 5135509-5135537, mismatch: 0, identity: 1.0

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcaaggcgaagcccgcctgcgcgggctg	Protospacer
*****************************

355. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 5132772-5132800, mismatch: 0, identity: 1.0

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcaaggcgaagcccgcctgcgcgggctg	Protospacer
*****************************

356. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 814515-814554, mismatch: 0, identity: 1.0

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****************************************

357. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 983025-983064, mismatch: 0, identity: 1.0

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****************************************

358. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 1525925-1525964, mismatch: 0, identity: 1.0

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****************************************

359. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 2519675-2519714, mismatch: 0, identity: 1.0

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****************************************

360. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 4452718-4452757, mismatch: 0, identity: 1.0

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****************************************

361. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 4463024-4463063, mismatch: 0, identity: 1.0

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****************************************

362. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 5327935-5327974, mismatch: 0, identity: 1.0

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****************************************

363. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1720709-1720727, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

364. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1722694-1722712, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

365. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1724924-1724942, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

366. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1821674-1821692, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

367. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1821724-1821742, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

368. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1821774-1821792, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

369. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1821789-1821807, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

370. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1821804-1821822, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

371. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1821819-1821837, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

372. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1821834-1821852, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

373. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2693347-2693365, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

374. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2693362-2693380, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

375. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4068468-4068486, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

376. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4882185-4882203, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

377. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4882200-4882218, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

378. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4882259-4882277, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

379. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 43259-43277, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

380. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 710950-710968, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

381. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 710972-710990, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

382. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 764099-764117, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

383. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2764168-2764186, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

384. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4130748-4130766, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

385. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4130791-4130809, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

386. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4130848-4130866, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

387. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5300742-5300760, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

388. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5300757-5300775, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

389. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5300779-5300797, mismatch: 0, identity: 1.0

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaaccttc	Protospacer
*******************

390. spacer 77.1|4182407|44|NC_009523|CRISPRCasFinder matches to position: 771745-771788, mismatch: 0, identity: 1.0

attccatagccgagggcttatggactttgaagaaataatccggt	CRISPR spacer
attccatagccgagggcttatggactttgaagaaataatccggt	Protospacer
********************************************

391. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 197733-197774, mismatch: 0, identity: 1.0

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	Protospacer
******************************************

392. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 197889-197930, mismatch: 0, identity: 1.0

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	Protospacer
******************************************

393. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 17751-17792, mismatch: 0, identity: 1.0

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	Protospacer
******************************************

394. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 723039-723080, mismatch: 0, identity: 1.0

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	Protospacer
******************************************

395. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 1257863-1257902, mismatch: 0, identity: 1.0

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggctagccgagggcttatggtctttgaagaaataatccgg	Protospacer
****************************************

396. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 4699923-4699962, mismatch: 0, identity: 1.0

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggctagccgagggcttatggtctttgaagaaataatccgg	Protospacer
****************************************

397. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 1462398-1462437, mismatch: 0, identity: 1.0

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggctagccgagggcttatggtctttgaagaaataatccgg	Protospacer
****************************************

398. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 1483936-1483972, mismatch: 0, identity: 1.0

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgaagaaataatcc	Protospacer
*************************************

399. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 3496257-3496300, mismatch: 0, identity: 1.0

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	Protospacer
********************************************

400. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 315070-315102, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

401. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 814456-814488, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

402. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 839795-839827, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

403. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1498795-1498827, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

404. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1721787-1721819, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

405. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1731641-1731673, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

406. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1827477-1827509, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

407. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 2036544-2036576, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

408. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3652864-3652896, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

409. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3687129-3687161, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

410. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4699895-4699927, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

411. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4961807-4961839, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

412. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5052454-5052486, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

413. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5100181-5100213, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

414. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5327865-5327897, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

415. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5328001-5328033, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

416. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5360974-5361006, mismatch: 0, identity: 1.0

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctata	Protospacer
*********************************

417. spacer 95.1|5132689|44|NC_009523|CRISPRCasFinder matches to position: 3647295-3647338, mismatch: 0, identity: 1.0

agaaatattccgctctagcccgcgcaggcgggcttcgtctcgtg	CRISPR spacer
agaaatattccgctctagcccgcgcaggcgggcttcgtctcgtg	Protospacer
********************************************

418. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 1483761-1483781, mismatch: 0, identity: 1.0

aagggcgcataccggtttata	CRISPR spacer
aagggcgcataccggtttata	Protospacer
*********************

419. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 3676816-3676836, mismatch: 0, identity: 1.0

aagggcgcataccggtttata	CRISPR spacer
aagggcgcataccggtttata	Protospacer
*********************

420. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1893952-1893969, mismatch: 0, identity: 1.0

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgcaggt	Protospacer
******************

421. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1894024-1894041, mismatch: 0, identity: 1.0

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgcaggt	Protospacer
******************

422. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1894092-1894109, mismatch: 0, identity: 1.0

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgcaggt	Protospacer
******************

423. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 3765546-3765563, mismatch: 0, identity: 1.0

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgcaggt	Protospacer
******************

424. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 3765588-3765605, mismatch: 0, identity: 1.0

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgcaggt	Protospacer
******************

425. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 4036583-4036600, mismatch: 0, identity: 1.0

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgcaggt	Protospacer
******************

426. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 1977472-1977498, mismatch: 1, identity: 0.963

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttattcaaagaccat	Protospacer
**************.************

427. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 2502082-2502108, mismatch: 1, identity: 0.963

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttattcaaagaccat	Protospacer
**************.************

428. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 4331613-4331639, mismatch: 1, identity: 0.963

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttattcaaagaccat	Protospacer
**************.************

429. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 4846759-4846785, mismatch: 1, identity: 0.963

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttcttcaaagaccat	Protospacer
************** ************

430. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 5232439-5232465, mismatch: 1, identity: 0.963

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttcttcaaagaccat	Protospacer
************** ************

431. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 5321622-5321648, mismatch: 1, identity: 0.963

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttgatcaaagaccat	Protospacer
*************** ***********

432. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 584902-584927, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaataaataatccgcca	Protospacer
************** ***********

433. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 585038-585063, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaataaataatccgcca	Protospacer
************** ***********

434. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1140549-1140574, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatacataatccgtca	Protospacer
***********************.**

435. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1140617-1140642, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatacataatccgtca	Protospacer
***********************.**

436. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1140685-1140710, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatacataatccgtca	Protospacer
***********************.**

437. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 2520083-2520108, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtacataatccgcca	Protospacer
***********.**************

438. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3421876-3421901, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaataaataatccgcca	Protospacer
************** ***********

439. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3562719-3562744, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtacataatccgcca	Protospacer
***********.**************

440. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3925249-3925274, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaataaataatccgcca	Protospacer
************** ***********

441. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 4336467-4336492, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtacataatccgcca	Protospacer
***********.**************

442. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 5194044-5194069, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtacataatccgcca	Protospacer
***********.**************

443. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 5558195-5558220, mismatch: 1, identity: 0.962

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaataaataatccgcca	Protospacer
************** ***********

444. spacer 6.3|522477|18|NC_009523|CRT matches to position: 3922809-3922826, mismatch: 1, identity: 0.944

ttcaccgctcaaccttca	CRISPR spacer
ttcaacgctcaaccttca	Protospacer
**** *************

445. spacer 6.3|522477|18|NC_009523|CRT matches to position: 5168043-5168060, mismatch: 1, identity: 0.944

ttcaccgctcaaccttca	CRISPR spacer
ttcaacgctcaaccttca	Protospacer
**** *************

446. spacer 6.3|522477|18|NC_009523|CRT matches to position: 517190-517207, mismatch: 1, identity: 0.944

ttcaccgctcaaccttca	CRISPR spacer
ttcaacgctcaaccttca	Protospacer
**** *************

447. spacer 6.3|522477|18|NC_009523|CRT matches to position: 1764786-1764803, mismatch: 1, identity: 0.944

ttcaccgctcaaccttca	CRISPR spacer
ttcaccgcccaaccttca	Protospacer
********.*********

448. spacer 7.1|687491|44|NC_009523|CRISPRCasFinder matches to position: 687422-687465, mismatch: 1, identity: 0.977

tcgccgccgccgctgcccccggtacaggcgcagcggcgctacgc	CRISPR spacer
tcgccgccgccgctgcccccggtacaggcgcagcggcgctgcgc	Protospacer
****************************************.***

449. spacer 7.1|687491|44|NC_009523|CRISPRCasFinder matches to position: 687563-687606, mismatch: 1, identity: 0.977

tcgccgccgccgctgcccccggtacaggcgcagcggcgctacgc	CRISPR spacer
tcgccgccgccgctgcccccggtacaggcgcagcggcgctgcgc	Protospacer
****************************************.***

450. spacer 10.1|907544|40|NC_009523|CRISPRCasFinder matches to position: 906371-906410, mismatch: 1, identity: 0.975

gtgatcggcggtgatcggcgggctgaagccctgcctcaca	CRISPR spacer
gtaatcggcggtgatcggcgggctgaagccctgcctcaca	Protospacer
**.*************************************

451. spacer 10.1|907544|40|NC_009523|CRISPRCasFinder matches to position: 906437-906476, mismatch: 1, identity: 0.975

gtgatcggcggtgatcggcgggctgaagccctgcctcaca	CRISPR spacer
gtaatcggcggtgatcggcgggctgaagccctgcctcaca	Protospacer
**.*************************************

452. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 149846-149863, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttatggactttga	Protospacer
*********** ******

453. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 197788-197805, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

454. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 197944-197961, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

455. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 268565-268582, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

456. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 268633-268650, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

457. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 315116-315133, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

458. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 536399-536416, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

459. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 551413-551430, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

460. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 723006-723023, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
aggacttatggtctttga	Protospacer
***.**************

461. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 771757-771774, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttatggactttga	Protospacer
*********** ******

462. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 782266-782283, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttatggactttga	Protospacer
*********** ******

463. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 808647-808664, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

464. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 991771-991788, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttatggtcgttga	Protospacer
************* ****

465. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1000129-1000146, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

466. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1075425-1075442, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

467. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1075493-1075510, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

468. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1075561-1075578, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

469. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1091771-1091788, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

470. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1140542-1140559, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

471. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1140610-1140627, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

472. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1140678-1140695, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

473. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1498764-1498781, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

474. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1525903-1525920, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttgtggtctttga	Protospacer
*******.**********

475. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 1877209-1877226, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttatggtccttga	Protospacer
*************.****

476. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2623730-2623747, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttatgatctttga	Protospacer
**********.*******

477. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2860872-2860889, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

478. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 2884834-2884851, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

479. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3002748-3002765, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

480. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3003582-3003599, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

481. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3460967-3460984, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

482. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3484893-3484910, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

483. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3562734-3562751, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

484. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3851110-3851127, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

485. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3913879-3913896, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttgtggtctttga	Protospacer
*******.**********

486. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 3919785-3919802, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

487. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4102993-4103010, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggattatggtctttga	Protospacer
**** *************

488. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4454090-4454107, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

489. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 4707405-4707422, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

490. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5052500-5052517, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

491. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5193969-5193986, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttatagtctttga	Protospacer
*********.********

492. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5327979-5327996, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcttatggcctttga	Protospacer
***********.******

493. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5469640-5469657, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

494. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5469708-5469725, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

495. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5469776-5469793, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggctgatggtctttga	Protospacer
****** ***********

496. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5585989-5586006, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

497. spacer 19.1|1257741|18|NC_009523|PILER-CR matches to position: 5586057-5586074, mismatch: 1, identity: 0.944

agggcttatggtctttga	CRISPR spacer
agggcgtatggtctttga	Protospacer
***** ************

498. spacer 26.1|1560886|22|NC_009523|CRISPRCasFinder matches to position: 1560844-1560865, mismatch: 1, identity: 0.955

gttccacctgccacgcccgacg	CRISPR spacer
gttccacctgccgcgcccgacg	Protospacer
************.*********

499. spacer 26.1|1560886|22|NC_009523|CRISPRCasFinder matches to position: 1560928-1560949, mismatch: 1, identity: 0.955

gttccacctgccacgcccgacg	CRISPR spacer
gttccacccgccacgcccgacg	Protospacer
********.*************

500. spacer 26.1|1560886|22|NC_009523|CRISPRCasFinder matches to position: 1560949-1560970, mismatch: 1, identity: 0.955

gttccacctgccacgcccgacg	CRISPR spacer
gttccacccgccacgcccgacg	Protospacer
********.*************

501. spacer 26.1|1560886|22|NC_009523|CRISPRCasFinder matches to position: 1560991-1561012, mismatch: 1, identity: 0.955

gttccacctgccacgcccgacg	CRISPR spacer
gttccacccgccacgcccgacg	Protospacer
********.*************

502. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 31001-31022, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

503. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 282943-282964, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
******* **************

504. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 363056-363077, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
******* **************

505. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 522532-522553, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

506. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 611192-611213, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgttcaacc	Protospacer
************** *******

507. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1505751-1505772, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
******* **************

508. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679325-1679346, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttccaccttcaacc	Protospacer
*********** **********

509. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679353-1679374, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttccaccttcaacc	Protospacer
*********** **********

510. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679367-1679388, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttccaccttcaacc	Protospacer
*********** **********

511. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679381-1679402, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttccaccttcaacc	Protospacer
*********** **********

512. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1764899-1764920, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

513. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1764906-1764927, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

514. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1764920-1764941, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

515. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1764927-1764948, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

516. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1770237-1770258, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

517. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1770244-1770265, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

518. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1818835-1818856, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaactttcaacc	Protospacer
**************.*******

519. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1819002-1819023, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttctacc	Protospacer
****************** ***

520. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1893907-1893928, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

521. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1971406-1971427, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

522. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1971413-1971434, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

523. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2238839-2238860, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

524. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2238888-2238909, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

525. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2238902-2238923, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

526. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2373242-2373263, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

527. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2373256-2373277, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

528. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2480456-2480477, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaactttcaaccttcaacc	Protospacer
*******.**************

529. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2764179-2764200, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

530. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2764186-2764207, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

531. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2768235-2768256, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaccc	Protospacer
******************* **

532. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869517-2869538, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

533. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869552-2869573, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

534. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869587-2869608, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

535. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 3667709-3667730, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

536. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4068483-4068504, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgttcaacc	Protospacer
************** *******

537. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4112181-4112202, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaccc	Protospacer
******************* **

538. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4116960-4116981, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

539. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4130823-4130844, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcgaccttcaaccttcaacc	Protospacer
****.*****************

540. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4130830-4130851, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcgaccttcaacc	Protospacer
***********.**********

541. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4222846-4222867, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaatcttcaacc	Protospacer
*************.********

542. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4222860-4222881, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcagccttcaacc	Protospacer
************.*********

543. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4222867-4222888, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcagccttcaaccttcaacc	Protospacer
*****.****************

544. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4438217-4438238, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

545. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4438252-4438273, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

546. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4651950-4651971, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcgaccttcaaccttcaacc	Protospacer
****.*****************

547. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656873-4656894, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaactttcaacc	Protospacer
**************.*******

548. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656922-4656943, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaactttcaacc	Protospacer
**************.*******

549. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656971-4656992, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaactttcaacc	Protospacer
**************.*******

550. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4756253-4756274, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
ctccaaccttcaaccttcaacc	Protospacer
**.*******************

551. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5067531-5067552, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacctccaacc	Protospacer
****************.*****

552. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5067538-5067559, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacctccaaccttcaacc	Protospacer
*********.************

553. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5217065-5217086, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccttcaccc	Protospacer
******************* **

554. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5232217-5232238, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

555. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5232224-5232245, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

556. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5244177-5244198, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
ctgcaaccttcaaccttcaacc	Protospacer
** *******************

557. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5244184-5244205, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacctgcaaccttcaacc	Protospacer
********* ************

558. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5506821-5506842, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
******* **************

559. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5506849-5506870, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgttcaacc	Protospacer
************** *******

560. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5506856-5506877, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
******* **************

561. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5571175-5571196, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
ctgcaaccttcaaccttcaacc	Protospacer
** *******************

562. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5571182-5571203, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

563. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5572945-5572966, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

564. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5572959-5572980, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

565. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5572973-5572994, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

566. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5572987-5573008, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

567. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5573001-5573022, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

568. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5573015-5573036, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

569. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5573022-5573043, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
***************.******

570. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5573043-5573064, mismatch: 1, identity: 0.955

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcaacc	Protospacer
********.*************

571. spacer 28.1|1561781|22|NC_009523|CRISPRCasFinder matches to position: 5138002-5138023, mismatch: 1, identity: 0.955

gttccacacccaaccttcaacc	CRISPR spacer
gttcaacacccaaccttcaacc	Protospacer
**** *****************

572. spacer 28.1|1561781|22|NC_009523|CRISPRCasFinder matches to position: 5138068-5138089, mismatch: 1, identity: 0.955

gttccacacccaaccttcaacc	CRISPR spacer
gttcaacacccaaccttcaacc	Protospacer
**** *****************

573. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 611199-611220, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaaccttcaacg	Protospacer
************** *******

574. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1164800-1164821, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaaccttcaacg	Protospacer
************** *******

575. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485414-1485435, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

576. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485421-1485442, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

577. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485428-1485449, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

578. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485471-1485492, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

579. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1505666-1505687, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

580. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1505673-1505694, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

581. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1505680-1505701, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

582. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1538527-1538548, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

583. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1586038-1586059, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaaccttcaacg	Protospacer
************** *******

584. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1687769-1687790, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

585. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2390305-2390326, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

586. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2390312-2390333, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

587. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526073-2526094, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

588. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526080-2526101, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

589. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526275-2526296, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaaccttcaacg	Protospacer
************** *******

590. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526317-2526338, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacctgcaacgttcaacg	Protospacer
********* ************

591. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526345-2526366, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacctgcaacgttcaacg	Protospacer
********* ************

592. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526373-2526394, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacctgcaacgttcaacg	Protospacer
********* ************

593. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526401-2526422, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacctgcaacgttcaacg	Protospacer
********* ************

594. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538127-2538148, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

595. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538134-2538155, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

596. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538141-2538162, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

597. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538148-2538169, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

598. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538155-2538176, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

599. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538183-2538204, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

600. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538190-2538211, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

601. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538197-2538218, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

602. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3068716-3068737, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaacgctcaacg	Protospacer
***************.******

603. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3068772-3068793, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaacgctcaacg	Protospacer
***************.******

604. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3117399-3117420, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

605. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3502714-3502735, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

606. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3502721-3502742, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

607. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4020385-4020406, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

608. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4020392-4020413, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

609. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4020399-4020420, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

610. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4995896-4995917, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

611. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4995903-4995924, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

612. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4995939-4995960, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

613. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4995946-4995967, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

614. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4995982-4996003, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

615. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5075089-5075110, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

616. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5137952-5137973, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

617. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5767642-5767663, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

618. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 43248-43266, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

619. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 611199-611217, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

620. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 711019-711037, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

621. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 711056-711074, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

622. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 889934-889952, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

623. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485308-1485326, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

624. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485414-1485432, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

625. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485421-1485439, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

626. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485428-1485446, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

627. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485471-1485489, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

628. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1538527-1538545, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

629. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1573675-1573693, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

630. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1573689-1573707, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

631. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1573703-1573721, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

632. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1573731-1573749, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

633. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1573760-1573778, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttgaaccttcaacg	Protospacer
******* ***********

634. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687622-1687640, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

635. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687699-1687717, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

636. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687727-1687745, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

637. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687769-1687787, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

638. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1971399-1971417, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

639. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2451134-2451152, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

640. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2451156-2451174, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

641. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2451207-2451225, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

642. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538127-2538145, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

643. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538134-2538152, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

644. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538141-2538159, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

645. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538148-2538166, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

646. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538155-2538173, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

647. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538162-2538180, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

648. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538183-2538201, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

649. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538190-2538208, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

650. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538197-2538215, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

651. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3101034-3101052, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

652. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3117346-3117364, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaaccttcaccg	Protospacer
**************** **

653. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3117399-3117417, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

654. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3117406-3117424, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

655. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3329121-3329139, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

656. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3471343-3471361, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtacaaccttcaacg	Protospacer
****** ************

657. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3502714-3502732, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

658. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3502721-3502739, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

659. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3502728-3502746, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

660. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3765428-3765446, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttccaccttcaacg	Protospacer
******** **********

661. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3765540-3765558, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

662. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3765582-3765600, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

663. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3998946-3998964, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

664. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3998968-3998986, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

665. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3998990-3999008, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

666. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3999012-3999030, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

667. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3999034-3999052, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caactttcaaccttcaacg	Protospacer
**** **************

668. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4020385-4020403, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

669. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4020392-4020410, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

670. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4020399-4020417, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

671. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4182339-4182357, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

672. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4352079-4352097, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

673. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4651943-4651961, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

674. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4922068-4922086, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

675. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4995896-4995914, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

676. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4995903-4995921, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

677. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4995910-4995928, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

678. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4995939-4995957, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

679. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4995946-4995964, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

680. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4995953-4995971, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

681. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4995982-4996000, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

682. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4995989-4996007, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

683. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5075089-5075107, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

684. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5075096-5075114, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

685. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5082831-5082849, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

686. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5168019-5168037, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

687. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5232273-5232291, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacattcaacg	Protospacer
*********** *******

688. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5244170-5244188, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

689. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5265481-5265499, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

690. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5502257-5502275, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

691. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5767642-5767660, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

692. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 517192-517210, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaaccttcaacg	Protospacer
*****.*************

693. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 921893-921911, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

694. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1080049-1080067, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

695. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1164803-1164821, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

696. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1164817-1164835, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

697. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1505669-1505687, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

698. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1505676-1505694, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

699. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1505683-1505701, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

700. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1564862-1564880, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

701. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1586041-1586059, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

702. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1586120-1586138, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

703. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1679165-1679183, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

704. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1722542-1722560, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

705. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1722570-1722588, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

706. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724698-1724716, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

707. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724758-1724776, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

708. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724825-1724843, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

709. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724847-1724865, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

710. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724869-1724887, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

711. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724891-1724909, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

712. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1872734-1872752, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

713. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1900703-1900721, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

714. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2390301-2390319, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

715. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2390308-2390326, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

716. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2390315-2390333, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

717. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2525992-2526010, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

718. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526069-2526087, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

719. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526076-2526094, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

720. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526083-2526101, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

721. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526097-2526115, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

722. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526278-2526296, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

723. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526313-2526331, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacctgcaacg	Protospacer
************* *****

724. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526341-2526359, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacctgcaacg	Protospacer
************* *****

725. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526369-2526387, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacctgcaacg	Protospacer
************* *****

726. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526397-2526415, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacctgcaacg	Protospacer
************* *****

727. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2547909-2547927, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

728. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2547923-2547941, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

729. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2547937-2547955, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

730. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2547951-2547969, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaaccttcaacg	Protospacer
****** ************

731. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2562837-2562855, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

732. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2562928-2562946, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

733. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2563033-2563051, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

734. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2693373-2693391, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

735. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3230075-3230093, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

736. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3230133-3230151, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

737. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3230191-3230209, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

738. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3230249-3230267, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

739. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3487113-3487131, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

740. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3695989-3696007, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacctgcaacg	Protospacer
************* *****

741. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3696003-3696021, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacctgcaacg	Protospacer
************* *****

742. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792578-3792596, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

743. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792607-3792625, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

744. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792636-3792654, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

745. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792665-3792683, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

746. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792687-3792705, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

747. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792709-3792727, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

748. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792738-3792756, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

749. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792767-3792785, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

750. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792796-3792814, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

751. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792825-3792843, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

752. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792847-3792865, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

753. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3792869-3792887, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

754. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4068479-4068497, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

755. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4491578-4491596, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

756. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655745-4655763, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttccaccttcaacg	Protospacer
******** **********

757. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655774-4655792, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttccaccttcaacg	Protospacer
******** **********

758. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655896-4655914, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttccaccttcaacg	Protospacer
******** **********

759. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655953-4655971, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttccaccttcaacg	Protospacer
******** **********

760. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655982-4656000, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttccaccttcaacg	Protospacer
******** **********

761. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4656011-4656029, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttccaccttcaacg	Protospacer
******** **********

762. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4656040-4656058, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttccaccttcaacg	Protospacer
******** **********

763. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4656069-4656087, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

764. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4657030-4657048, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

765. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4756234-4756252, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

766. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4882219-4882237, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

767. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5067569-5067587, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

768. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5137955-5137973, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

769. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5138050-5138068, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

770. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5138123-5138141, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

771. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5506845-5506863, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaacg	Protospacer
**** **************

772. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5550553-5550571, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

773. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5550634-5550652, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

774. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5550723-5550741, mismatch: 1, identity: 0.947

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgttcaacg	Protospacer
*********** *******

775. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 764052-764073, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

776. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 889836-889857, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

777. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1679318-1679339, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttccacc	Protospacer
****************** ***

778. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1679346-1679367, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccttccacc	Protospacer
****************** ***

779. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1764913-1764934, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

780. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1770251-1770272, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

781. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2480233-2480254, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccgaccttcaaccttcaacc	Protospacer
****.*****************

782. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2480254-2480275, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccgaccttcaaccttcaacc	Protospacer
****.*****************

783. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2768228-2768249, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccgcaaccttcaaccttcaacc	Protospacer
** *******************

784. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2869510-2869531, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

785. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2869524-2869545, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccctcaacc	Protospacer
***************.******

786. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2869545-2869566, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

787. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2869559-2869580, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccctcaacc	Protospacer
***************.******

788. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2869580-2869601, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

789. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2869594-2869615, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaaccctcaacc	Protospacer
***************.******

790. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3792597-3792618, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccctcaaccttcaacc	Protospacer
********.*************

791. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4116967-4116988, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

792. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4182091-4182112, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaacgttcaaccttcaacc	Protospacer
******* **************

793. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4438224-4438245, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

794. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4438259-4438280, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

795. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4656838-4656859, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccacaaccttcaaccttcaacc	Protospacer
** *******************

796. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4656859-4656880, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccacaaccttcaaccttcaacc	Protospacer
** *******************

797. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4656908-4656929, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccacaaccttcaaccttcaacc	Protospacer
** *******************

798. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4656943-4656964, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccacaaccttcaaccttcaacc	Protospacer
** *******************

799. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4656992-4657013, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
ccacaaccttcaaccttcaacc	Protospacer
** *******************

800. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5232245-5232266, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

801. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5535864-5535885, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

802. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5572938-5572959, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

803. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5573036-5573057, mismatch: 1, identity: 0.955

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaacc	Protospacer
**.*******************

804. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2869482-2869503, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

805. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2869503-2869524, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

806. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2869538-2869559, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

807. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2869573-2869594, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

808. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1290359-1290380, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

809. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2562798-2562819, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

810. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2562896-2562917, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

811. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2562980-2563001, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

812. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2669455-2669476, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

813. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 4222811-4222832, mismatch: 1, identity: 0.955

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************** ****

814. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 711012-711033, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

815. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 822954-822975, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

816. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1538520-1538541, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

817. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1971462-1971483, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

818. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2314272-2314293, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

819. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2314301-2314322, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

820. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2538120-2538141, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

821. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2764193-2764214, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

822. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2765674-2765695, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

823. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3101027-3101048, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

824. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3101112-3101133, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

825. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3999041-3999062, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaactttcaacc	Protospacer
************** *******

826. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4018558-4018579, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

827. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4213296-4213317, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacctgcaacgttcaacc	Protospacer
********* ************

828. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4727010-4727031, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

829. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5075082-5075103, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

830. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 30945-30966, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

831. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 240533-240554, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttgaaccttcaacgttcaacc	Protospacer
*** ******************

832. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 917870-917891, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

833. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1079891-1079912, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

834. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1079935-1079956, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

835. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1080016-1080037, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

836. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1505709-1505730, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

837. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1586024-1586045, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

838. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1586110-1586131, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

839. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1722532-1722553, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

840. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1872724-1872745, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

841. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2547884-2547905, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgtgcaacc	Protospacer
**************** *****

842. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2562889-2562910, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

843. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2841997-2842018, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

844. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3335536-3335557, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

845. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3695993-3696014, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacctgcaacgttcaacc	Protospacer
********* ************

846. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4222804-4222825, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

847. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4505722-4505743, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

848. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4656073-4656094, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacc	Protospacer
******* **************

849. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5067445-5067466, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

850. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5506828-5506849, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

851. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5506863-5506884, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

852. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5551532-5551553, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

853. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5726349-5726370, mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaacc	Protospacer
************** *******

854. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 282943-282964, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
************** *******

855. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 611192-611213, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgttcaacc	Protospacer
******* **************

856. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 363056-363077, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
************** *******

857. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1505751-1505772, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
************** *******

858. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4068483-4068504, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgttcaacc	Protospacer
******* **************

859. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4655886-4655907, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaacgttccacc	Protospacer
****************** ***

860. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5506821-5506842, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
************** *******

861. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5506849-5506870, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgttcaacc	Protospacer
******* **************

862. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5506856-5506877, mismatch: 1, identity: 0.955

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaaccttcaacc	Protospacer
************** *******

863. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 711056-711077, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

864. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1573703-1573724, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

865. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3329121-3329142, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

866. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4352079-4352100, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

867. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4651943-4651964, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

868. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4922061-4922082, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgtgcaacg	Protospacer
**************** *****

869. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5082831-5082852, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

870. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5168019-5168040, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

871. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5244170-5244191, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

872. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5502257-5502278, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

873. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 921890-921911, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

874. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1080046-1080067, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

875. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1356206-1356227, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
ctccaaccttcaacgttcaacg	Protospacer
**.*******************

876. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1574618-1574639, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgtgcaacg	Protospacer
**************** *****

877. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1586117-1586138, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

878. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1679169-1679190, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgttcaccg	Protospacer
******************* **

879. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1722539-1722560, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

880. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1872731-1872752, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

881. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 2525996-2526017, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgctcaacg	Protospacer
***************.******

882. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 2526282-2526303, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgctcaacg	Protospacer
***************.******

883. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3230072-3230093, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

884. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3230130-3230151, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

885. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3230188-3230209, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

886. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3230246-3230267, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

887. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3792633-3792654, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

888. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3792662-3792683, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

889. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3792735-3792756, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

890. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3792764-3792785, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

891. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3792793-3792814, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

892. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3792822-3792843, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

893. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4491575-4491596, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

894. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4656066-4656087, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaacgttcaacg	Protospacer
******* **************

895. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4657027-4657048, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

896. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5067566-5067587, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

897. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5506842-5506863, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaacg	Protospacer
************** *******

898. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5550631-5550652, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaacgttcaacg	Protospacer
******* **************

899. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5550720-5550741, mismatch: 1, identity: 0.955

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaacgttcaacg	Protospacer
******* **************

900. spacer 31.1|1721749|30|NC_009523|CRISPRCasFinder matches to position: 4846756-4846785, mismatch: 1, identity: 0.967

gtagcggattatttattcaaagaccataat	CRISPR spacer
gtagcggattatttcttcaaagaccataat	Protospacer
************** ***************

901. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 808644-808679, mismatch: 1, identity: 0.972

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgccctggatagccgagggcgtatggtctttgaaga	Protospacer
******************** ***************

902. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 3398004-3398039, mismatch: 1, identity: 0.972

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgccctggatagccgagggcttatggtctttgagga	Protospacer
*********************************.**

903. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 4699917-4699952, mismatch: 1, identity: 0.972

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgccctggctagccgagggcttatggtctttgaaga	Protospacer
******** ***************************

904. spacer 48.1|2403838|44|NC_009523|CRISPRCasFinder matches to position: 1483933-1483976, mismatch: 1, identity: 0.977

attccatagccgagggcttatggtctttgaataaataatccggt	CRISPR spacer
attccatagccgagggcttatggtctttgaagaaataatccggt	Protospacer
******************************* ************

905. spacer 48.1|2403838|44|NC_009523|CRISPRCasFinder matches to position: 1857581-1857624, mismatch: 1, identity: 0.977

attccatagccgagggcttatggtctttgaataaataatccggt	CRISPR spacer
attccatagccgggggcttatggtctttgaataaataatccggt	Protospacer
************.*******************************

906. spacer 50.1|2491859|37|NC_009523|CRISPRCasFinder matches to position: 336201-336237, mismatch: 1, identity: 0.973

ataattactcaatgaccataagccctcggctatccag	CRISPR spacer
ataattactcaaagaccataagccctcggctatccag	Protospacer
************ ************************

907. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 450686-450708, mismatch: 1, identity: 0.957

tcgatagccgatagccgatagcc	CRISPR spacer
tcgatagccgagagccgatagcc	Protospacer
*********** ***********

908. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 1213606-1213628, mismatch: 1, identity: 0.957

tcgatagccgatagccgatagcc	CRISPR spacer
tcgatagtcgatagccgatagcc	Protospacer
*******.***************

909. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 5469400-5469422, mismatch: 1, identity: 0.957

tcgatagccgatagccgatagcc	CRISPR spacer
tcgatagccgatagccggtagcc	Protospacer
*****************.*****

910. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 335882-335925, mismatch: 1, identity: 0.977

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggatagccgagggcttatggtctttgaataaataatccggtat	Protospacer
***************************** **************

911. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 4126058-4126101, mismatch: 1, identity: 0.977

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggatagccgagggcttatggtctttgaagaaataatccggtat	Protospacer
*****************************.**************

912. spacer 61.1|3334464|44|NC_009523|CRISPRCasFinder matches to position: 4699921-4699964, mismatch: 1, identity: 0.977

ctggctagccgagggcttatggtctttgaagaaataatccgata	CRISPR spacer
ctggctagccgagggcttatggtctttgaagaaataatccggta	Protospacer
*****************************************.**

913. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 1977498-1977526, mismatch: 1, identity: 0.966

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcgaggcgaagcccgcctgcgcgggctg	Protospacer
***.*************************

914. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 4331639-4331667, mismatch: 1, identity: 0.966

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcaaggcaaagcccgcctgcgcgggctg	Protospacer
********.********************

915. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 17573-17612, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctggagcggattat	Protospacer
***************************** **********

916. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 748479-748518, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctggagcggattat	Protospacer
***************************** **********

917. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 839797-839836, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctatagcggattat	Protospacer
****************************.***********

918. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 916951-916990, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccaaggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****.***********************************

919. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 988116-988155, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccaaggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****.***********************************

920. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 1898760-1898799, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctggagcggattat	Protospacer
***************************** **********

921. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 3282611-3282650, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccaaggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****.***********************************

922. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 3645787-3645826, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctggagcggattat	Protospacer
***************************** **********

923. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 4846774-4846813, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccaaggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****.***********************************

924. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 5230704-5230743, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccaaggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****.***********************************

925. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 5321594-5321633, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccaaggcgaagcccgcctgcgcgggctgtagcggattat	Protospacer
****.***********************************

926. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 5645091-5645130, mismatch: 1, identity: 0.975

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcacgggctgtagcggattat	Protospacer
*********************.******************

927. spacer 65.1|3647324|43|NC_009523|CRISPRCasFinder matches to position: 3496297-3496339, mismatch: 1, identity: 0.977

gagcggaatatttcttcaaagaccataagccctcggctagcca	CRISPR spacer
gagcggaatatttcttcaaagaccataagccctcggctaggca	Protospacer
**************************************** **

928. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 363265-363283, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

929. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 917891-917909, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

930. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1564851-1564869, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

931. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1586073-1586091, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

932. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1721877-1721895, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
ctttaaccttccaaccttc	Protospacer
***.***************

933. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1724709-1724727, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

934. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1724769-1724787, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

935. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1724836-1724854, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

936. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1724858-1724876, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

937. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1724880-1724898, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

938. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1724902-1724920, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

939. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1729888-1729906, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaacgttc	Protospacer
*************** ***

940. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1872745-1872763, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

941. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1900632-1900650, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

942. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2368426-2368444, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

943. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2368441-2368459, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

944. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2562826-2562844, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

945. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2562917-2562935, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

946. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4756267-4756285, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacctttcaaccttc	Protospacer
**********.********

947. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5067480-5067498, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

948. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5067502-5067520, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

949. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538545-5538563, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaaaccttc	Protospacer
*********** *******

950. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5550601-5550619, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

951. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5550616-5550634, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

952. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5550690-5550708, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

953. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5550705-5550723, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

954. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5551598-5551616, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttccaacgttc	Protospacer
*************** ***

955. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 43193-43211, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttgcaaccttc	Protospacer
********** ********

956. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 43215-43233, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttgcaaccttc	Protospacer
********** ********

957. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 282834-282852, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

958. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 282849-282867, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

959. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 282864-282882, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

960. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 282879-282897, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

961. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 282894-282912, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

962. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 282917-282935, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

963. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 282932-282950, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

964. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 3998920-3998938, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

965. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5265492-5265510, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaaccttc	Protospacer
******* ***********

966. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5267193-5267211, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

967. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5267208-5267226, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccttc	Protospacer
********** ********

968. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5549974-5549992, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

969. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5549989-5550007, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

970. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5550004-5550022, mismatch: 1, identity: 0.947

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccaccttc	Protospacer
************ ******

971. spacer 77.1|4182407|44|NC_009523|CRISPRCasFinder matches to position: 1483933-1483976, mismatch: 1, identity: 0.977

attccatagccgagggcttatggactttgaagaaataatccggt	CRISPR spacer
attccatagccgagggcttatggtctttgaagaaataatccggt	Protospacer
*********************** ********************

972. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 991802-991843, mismatch: 1, identity: 0.976

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccctggatagccgagggc	Protospacer
***************************** ************

973. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 1132335-1132376, mismatch: 1, identity: 0.976

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccttgcatagccgagggc	Protospacer
**************************.***************

974. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 2622529-2622570, mismatch: 1, identity: 0.976

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccttgcatagccgagggc	Protospacer
**************************.***************

975. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 3496257-3496298, mismatch: 1, identity: 0.976

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccctggatagccgagggc	Protospacer
***************************** ************

976. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 487952-487993, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttgcctagccgagggctt	Protospacer
**************************** *************

977. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 1770050-1770091, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttgcctagccgagggctt	Protospacer
**************************** *************

978. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 2137760-2137801, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttgcctagccgagggctt	Protospacer
**************************** *************

979. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 2192309-2192350, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccctgcatagccgagggctt	Protospacer
************************.*****************

980. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 2623741-2623782, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcgggcgggcttcgccttgcatagccgagggctt	Protospacer
**********.*******************************

981. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 1195349-1195390, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcctcgcatagccgagggctt	Protospacer
*************************.****************

982. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 2891821-2891862, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcctcgcatagccgagggctt	Protospacer
*************************.****************

983. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 3064485-3064526, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttggatagccgagggctt	Protospacer
*************************** **************

984. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 5132772-5132813, mismatch: 1, identity: 0.976

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttgcctagccgagggctt	Protospacer
**************************** *************

985. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 1827437-1827476, mismatch: 1, identity: 0.975

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggctagccgagggcttatggtctttgaataaataatccgg	Protospacer
**************************** ***********

986. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 3652892-3652931, mismatch: 1, identity: 0.975

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggctagccgagggcttatggtctttgaataaataatccgg	Protospacer
**************************** ***********

987. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 4126061-4126100, mismatch: 1, identity: 0.975

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggatagccgagggcttatggtctttgaagaaataatccgg	Protospacer
** *************************************

988. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 232626-232662, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgaacaaataatcc	Protospacer
*************************** *********

989. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 536388-536424, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggctgatggtctttgaagaaataatcc	Protospacer
************** **********************

990. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 771749-771785, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggactttgaagaaataatcc	Protospacer
******************* *****************

991. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 1787772-1787808, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgaataaataatcc	Protospacer
*************************** *********

992. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 1877198-1877234, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtccttgaagaaataatcc	Protospacer
*********************.***************

993. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 2230814-2230850, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgaataaataatcc	Protospacer
*************************** *********

994. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 2327105-2327141, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgaataaataatcc	Protospacer
*************************** *********

995. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 2825376-2825412, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgggggcttatggtctttgaagaaataatcc	Protospacer
********.****************************

996. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 4859233-4859269, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgaataaataatcc	Protospacer
*************************** *********

997. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 5132663-5132699, mismatch: 1, identity: 0.973

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgaagaaatattcc	Protospacer
********************************* ***

998. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 197733-197776, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatgcagggcgaagcccgcctgcgcgggctagagc	Protospacer
************ *******************************

999. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 197889-197932, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatgcagggcgaagcccgcctgcgcgggctagagc	Protospacer
************ *******************************

1000. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 2623675-2623718, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccagggcaaagcccgcctgcgcgggctagagc	Protospacer
*******************.************************

1001. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 3484767-3484810, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccagggcgaagcccgcctgcgcgggcgagagc	Protospacer
************************************** *****

1002. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 4327516-4327559, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctagagc	Protospacer
*********** ********************************

1003. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 4483966-4484009, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccagggcgaagcccgcctgcgcgggctatagc	Protospacer
**************************************** ***

1004. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 5095970-5096013, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gcccccggctatccagggcgaagcccgcctgcgcgggctagagc	Protospacer
****.***************************************

1005. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 1829439-1829482, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccaaggcgaagcccgcctgcgcgggctagagc	Protospacer
***************.****************************

1006. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 2884863-2884906, mismatch: 1, identity: 0.977

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccagggcgaagcccgcctgtgcgggctagagc	Protospacer
*******************************.************

1007. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 782288-782320, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctata	Protospacer
******.**************************

1008. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 814524-814556, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctgta	Protospacer
******************************.**

1009. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 983023-983055, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctgta	Protospacer
******************************.**

1010. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1462365-1462397, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctata	Protospacer
******.**************************

1011. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1467515-1467547, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctata	Protospacer
******.**************************

1012. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1498727-1498759, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctata	Protospacer
******.**************************

1013. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1525934-1525966, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctgta	Protospacer
******************************.**

1014. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 2403881-2403913, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctata	Protospacer
******.**************************

1015. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 2519684-2519716, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctgta	Protospacer
******************************.**

1016. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3386464-3386496, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctata	Protospacer
******.**************************

1017. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4126028-4126060, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccagggcgaagcccgcctgcgcgggctata	Protospacer
** ******************************

1018. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4126096-4126128, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccagggcgaagcccgcctgcgcgggctata	Protospacer
** ******************************

1019. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4452716-4452748, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctgta	Protospacer
******************************.**

1020. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4463033-4463065, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctgta	Protospacer
******************************.**

1021. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4483975-4484007, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccagggcgaagcccgcctgcgcgggctata	Protospacer
** ******************************

1022. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4772988-4773020, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctata	Protospacer
******.**************************

1023. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5103430-5103462, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccggggcgaagcccgcctgcgcgggctata	Protospacer
*****.***************************

1024. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5327933-5327965, mismatch: 1, identity: 0.97

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcgcgggctgta	Protospacer
******************************.**

1025. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 473310-473330, mismatch: 1, identity: 0.952

aagggcgcataccggtttata	CRISPR spacer
aagggcgaataccggtttata	Protospacer
******* *************

1026. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 475098-475118, mismatch: 1, identity: 0.952

aagggcgcataccggtttata	CRISPR spacer
aagggcgaataccggtttata	Protospacer
******* *************

1027. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 1764455-1764475, mismatch: 1, identity: 0.952

aagggcgcataccggtttata	CRISPR spacer
aagggcgaataccggtttata	Protospacer
******* *************

1028. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 4768427-4768447, mismatch: 1, identity: 0.952

aagggcgcataccggtttata	CRISPR spacer
aagggcgaataccggtttata	Protospacer
******* *************

1029. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 4768634-4768654, mismatch: 1, identity: 0.952

aagggcgcataccggtttata	CRISPR spacer
aagggcgcataccggattata	Protospacer
*************** *****

1030. spacer 98.2|5230866|21|NC_009523|CRT matches to position: 2229546-2229566, mismatch: 1, identity: 0.952

cgttcggtagagcggattata	CRISPR spacer
cgttcggtatagcggattata	Protospacer
********* ***********

1031. spacer 98.2|5230866|21|NC_009523|CRT matches to position: 3173632-3173652, mismatch: 1, identity: 0.952

cgttcggtagagcggattata	CRISPR spacer
cgttcggtagagcggtttata	Protospacer
*************** *****

1032. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1356211-1356228, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1033. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1586050-1586067, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1034. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1724589-1724606, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1035. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1724611-1724628, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1036. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1724633-1724650, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1037. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1724722-1724739, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1038. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 1724782-1724799, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1039. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 2368454-2368471, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1040. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 2536181-2536198, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttcaacgttgcaggt	Protospacer
***** ************

1041. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 3101083-3101100, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1042. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 4655884-4655901, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1043. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 4656064-4656081, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1044. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 4756309-4756326, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgcgggt	Protospacer
**************.***

1045. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 4806587-4806604, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1046. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 4922106-4922123, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaaggttgcaggt	Protospacer
******** *********

1047. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 5265473-5265490, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1048. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 5267269-5267286, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1049. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 5550577-5550594, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1050. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 5550629-5550646, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1051. spacer 99.5|5244497|18|NC_009523|CRT matches to position: 5550718-5550735, mismatch: 1, identity: 0.944

acgttgaacgttgcaggt	CRISPR spacer
acgttgaacgttgaaggt	Protospacer
************* ****

1052. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 262526-262563, mismatch: 1, identity: 0.974

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttgtctagccgagg	Protospacer
**********************************.***

1053. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 335950-335976, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtggcggattatttcttcaaagaccat	Protospacer
**.*********** ************

1054. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 487993-488019, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1055. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 814500-814526, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1056. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 916936-916962, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1057. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 988101-988127, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1058. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 1195323-1195349, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtggcggattatttcttcaaagaccat	Protospacer
**.*********** ************

1059. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 1877125-1877151, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1060. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 2137801-2137827, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1061. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 2519660-2519686, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1062. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 2543501-2543527, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1063. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 2891795-2891821, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtggcggattatttcttcaaagaccat	Protospacer
**.*********** ************

1064. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 3282639-3282665, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1065. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 3715460-3715486, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtggcggattatttcttcaaagaccat	Protospacer
**.*********** ************

1066. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 4452746-4452772, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1067. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 4463009-4463035, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1068. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 5132746-5132772, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1069. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 5230689-5230715, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1070. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 5616994-5617020, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1071. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to position: 5645119-5645145, mismatch: 2, identity: 0.926

gtagcggattatttgttcaaagaccat	CRISPR spacer
gtagcggattatttactcaaagaccat	Protospacer
**************..***********

1072. spacer 4.1|398312|20|NC_009523|CRISPRCasFinder matches to position: 4370993-4371012, mismatch: 2, identity: 0.9

gtgacggatcggcacggaag	CRISPR spacer
gtgacggatcggcgcggtag	Protospacer
*************.*** **

1073. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 186691-186716, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtaaataatccgcca	Protospacer
***********.** ***********

1074. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 304639-304664, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1075. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 335640-335665, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1076. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 335951-335976, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1077. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1091710-1091735, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtaaataatccgcca	Protospacer
***********.** ***********

1078. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1195323-1195348, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1079. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1462464-1462489, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtaaataatccgcca	Protospacer
***********.** ***********

1080. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1570081-1570106, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtaaataatccgcca	Protospacer
***********.** ***********

1081. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1693660-1693685, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtaaataatccgcca	Protospacer
***********.** ***********

1082. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 1787517-1787542, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtaaataatccgcca	Protospacer
***********.** ***********

1083. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 2309959-2309984, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtaaataatccgcca	Protospacer
***********.** ***********

1084. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 2891795-2891820, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1085. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3004393-3004418, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaatgcatcatccgcca	Protospacer
*************.*** ********

1086. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3485114-3485139, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaacaaataatccgcca	Protospacer
************.* ***********

1087. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3550421-3550446, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1088. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3715460-3715485, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1089. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 3867990-3868015, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1090. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 4093397-4093422, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1091. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 4093465-4093490, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1092. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 5193976-5194001, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atagtctttgagtacataatccgcca	Protospacer
**.********.**************

1093. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 5469647-5469672, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgaagaaataatccgcca	Protospacer
************ * ***********

1094. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to position: 5674856-5674881, mismatch: 2, identity: 0.923

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgagtaaataatccgcca	Protospacer
***********.** ***********

1095. spacer 10.1|907544|40|NC_009523|CRISPRCasFinder matches to position: 906305-906344, mismatch: 2, identity: 0.95

gtgatcggcggtgatcggcgggctgaagccctgcctcaca	CRISPR spacer
gtaatcggcggtgatcgacgggctgaagccctgcctcaca	Protospacer
**.**************.**********************

1096. spacer 12.1|983053|45|NC_009523|CRISPRCasFinder matches to position: 4331595-4331639, mismatch: 2, identity: 0.956

gtagcggattatttactcaaagaccataagccctcggctatgcga	CRISPR spacer
gtagcggattatttattcaaagaccataagccctcggctaggcga	Protospacer
***************.************************ ****

1097. spacer 12.1|983053|45|NC_009523|CRISPRCasFinder matches to position: 5132728-5132772, mismatch: 2, identity: 0.956

gtagcggattatttactcaaagaccataagccctcggctatgcga	CRISPR spacer
gtagcggattatttactcaaagaccataagccctcggctacacga	Protospacer
****************************************..***

1098. spacer 13.1|984676|37|NC_009523|CRISPRCasFinder matches to position: 5261388-5261424, mismatch: 2, identity: 0.946

tctgcgtgcgggcggggacgcccgcgctcccaggatg	CRISPR spacer
tctgcatgcgggcggggacgcccgcgcacccaggatg	Protospacer
*****.********************* *********

1099. spacer 16.1|1009256|43|NC_009523|CRISPRCasFinder matches to position: 2377216-2377258, mismatch: 2, identity: 0.953

cgctaacccgcgcaggcggacttcgcattccatagccgagggc	CRISPR spacer
cgccagcccgcgcaggcggacttcgcattccatagccgagggc	Protospacer
***.*.*************************************

1100. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 363392-363413, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaccc	Protospacer
***************.*** **

1101. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 363448-363469, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaaccctcaccc	Protospacer
***************.*** **

1102. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 517203-517224, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaaccctcaacc	Protospacer
******* *******.******

1103. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 611185-611206, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaacctgcaacc	Protospacer
******* ******** *****

1104. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 764059-764080, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcgaccctcaaccttcaacc	Protospacer
****.***.*************

1105. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 764073-764094, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccttcgacc	Protospacer
********.*********.***

1106. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 921897-921918, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgttcaccc	Protospacer
************** **** **

1107. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1164807-1164828, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgtgcaacc	Protospacer
************** * *****

1108. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1177590-1177611, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1109. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1290359-1290380, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1110. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1290381-1290402, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
ctcccaccttcaaccttcaacc	Protospacer
**.* *****************

1111. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1505702-1505723, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
ctacaacgttcaaccttcaacc	Protospacer
** **** **************

1112. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1505744-1505765, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
ctttaaccttcaacgttcaacc	Protospacer
***.********** *******

1113. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1573696-1573717, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgtgcaacc	Protospacer
************** * *****

1114. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1573717-1573738, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgtgcaaccttcaacc	Protospacer
******* * ************

1115. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1586052-1586073, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaacgttcaacc	Protospacer
******* ****** *******

1116. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679311-1679332, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1117. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679339-1679360, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1118. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679360-1679381, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttccaccttcaaccttccacc	Protospacer
**** ************* ***

1119. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679374-1679395, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttccaccttcaaccttccacc	Protospacer
**** ************* ***

1120. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1679388-1679409, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttccaccttcaaccttccacc	Protospacer
**** ************* ***

1121. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 1957373-1957394, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttccaccttcaaccttccacc	Protospacer
**** ************* ***

1122. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2238874-2238895, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccctcaacc	Protospacer
********.******.******

1123. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2390474-2390495, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgtgcaacc	Protospacer
************** * *****

1124. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2390481-2390502, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgtgcaaccttcaacc	Protospacer
******* * ************

1125. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2451214-2451235, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
ctccaaccctcaaccttcaacc	Protospacer
**.*****.*************

1126. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2480296-2480317, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacctccaacctccaacc	Protospacer
*********.******.*****

1127. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2562798-2562819, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1128. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2562805-2562826, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1129. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2562896-2562917, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1130. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2562903-2562924, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1131. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2562932-2562953, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgttcaccc	Protospacer
************** **** **

1132. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2562980-2563001, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1133. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2562987-2563008, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1134. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2563001-2563022, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1135. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2563037-2563058, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgttcaccc	Protospacer
************** **** **

1136. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2669455-2669476, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1137. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2768214-2768235, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccgcaacc	Protospacer
***************. *****

1138. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2768221-2768242, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccgcaaccttcaacc	Protospacer
********. ************

1139. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869475-2869496, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1140. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869482-2869503, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1141. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869496-2869517, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1142. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869503-2869524, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1143. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869531-2869552, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1144. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869538-2869559, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1145. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869566-2869587, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1146. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 2869573-2869594, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1147. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 3101077-3101098, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacgttcaacgttcaacc	Protospacer
******* ****** *******

1148. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 3471350-3471371, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgtacaacc	Protospacer
************** * *****

1149. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4067320-4067341, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccgcaaccttcaacc	Protospacer
********. ************

1150. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4130859-4130880, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcgactttcaaccttcaacc	Protospacer
****.**.**************

1151. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4222811-4222832, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccccaacc	Protospacer
***************..*****

1152. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4222818-4222839, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1153. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4222853-4222874, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaatcttcaaccttcagcc	Protospacer
******.************.**

1154. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4397696-4397717, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccctcaacc	Protospacer
********.******.******

1155. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4397724-4397745, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1156. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4651957-4651978, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcgaccttcgaccttcaacc	Protospacer
****.******.**********

1157. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656845-4656866, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacccacaacc	Protospacer
***************. *****

1158. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656852-4656873, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccacaaccttcaacc	Protospacer
********. ************

1159. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 4656901-4656922, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccacaaccttcaacc	Protospacer
********. ************

1160. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5067517-5067538, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1161. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5067552-5067573, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaacccccaaccttcaacc	Protospacer
********..************

1162. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5082824-5082845, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccttcaacgttcaccc	Protospacer
************** **** **

1163. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5535850-5535871, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaaccctcaacc	Protospacer
********.******.******

1164. spacer 27.2|1561096|22|NC_009523|CRISPRCasFinder matches to position: 5726400-5726421, mismatch: 2, identity: 0.909

cttcaaccttcaaccttcaacc	CRISPR spacer
cttcaaccctcaatcttcaacc	Protospacer
********.****.********

1165. spacer 28.1|1561781|22|NC_009523|CRISPRCasFinder matches to position: 1818988-1819009, mismatch: 2, identity: 0.909

gttccacacccaaccttcaacc	CRISPR spacer
gttcaacccccaaccttcaacc	Protospacer
**** ** **************

1166. spacer 28.1|1561781|22|NC_009523|CRISPRCasFinder matches to position: 2869601-2869622, mismatch: 2, identity: 0.909

gttccacacccaaccttcaacc	CRISPR spacer
gttcaacccccaaccttcaacc	Protospacer
**** ** **************

1167. spacer 28.1|1561781|22|NC_009523|CRISPRCasFinder matches to position: 4491540-4491561, mismatch: 2, identity: 0.909

gttccacacccaaccttcaacc	CRISPR spacer
gttcaacgcccaaccttcaacc	Protospacer
**** **.**************

1168. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 282957-282978, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1169. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 363042-363063, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1170. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 941560-941581, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttgaacgttcaacgttcaacg	Protospacer
*** *** **************

1171. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485280-1485301, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1172. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485294-1485315, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1173. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485301-1485322, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgctcaacg	Protospacer
******* *******.******

1174. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485315-1485336, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1175. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485329-1485350, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1176. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485343-1485364, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1177. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1485407-1485428, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgctcaacg	Protospacer
******* *******.******

1178. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1538534-1538555, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gtttaacgttcaacgttcaacg	Protospacer
***.*** **************

1179. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1679126-1679147, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttgaacgttcaacg	Protospacer
******* ** ***********

1180. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1687629-1687650, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacactcaacgttcaacg	Protospacer
******* .*************

1181. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1687664-1687685, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1182. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1687678-1687699, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacactcaacgttcaacg	Protospacer
******* .*************

1183. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1687734-1687755, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacactcaacgttcaacg	Protospacer
******* .*************

1184. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1769528-1769549, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcgacgttcaacgttcaacg	Protospacer
****.** **************

1185. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 1821638-1821659, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttgaacgttcaacg	Protospacer
******* ** ***********

1186. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2114666-2114687, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttgaacgttcaacgttcaacg	Protospacer
*** *** **************

1187. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2390291-2390312, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gtgcaacattcaacgttcaacg	Protospacer
** **** **************

1188. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526031-2526052, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaccctgcaacgttcaacg	Protospacer
***** *** ************

1189. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2526101-2526122, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gtgcaaccttcaacgctcaacg	Protospacer
** ************.******

1190. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538169-2538190, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1191. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2538176-2538197, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgctcaacg	Protospacer
******* *******.******

1192. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2562743-2562764, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1193. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3068610-3068631, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgctcaacg	Protospacer
******* *******.******

1194. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3068660-3068681, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgctcaacg	Protospacer
******* *******.******

1195. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3068667-3068688, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1196. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3068681-3068702, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1197. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3068737-3068758, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgctcaacgttcaacg	Protospacer
******* .*************

1198. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3068751-3068772, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1199. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3101020-3101041, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1200. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3101070-3101091, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1201. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3101105-3101126, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1202. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3117311-3117332, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1203. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3380972-3380993, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcacctttcaacgttcaacg	Protospacer
***** *.**************

1204. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3487110-3487131, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gtgcaaccttcaaccttcaacg	Protospacer
** *********** *******

1205. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3498106-3498127, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaaccttgaacg	Protospacer
************** ** ****

1206. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3765575-3765596, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgctcaacg	Protospacer
******* *******.******

1207. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 3765589-3765610, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttccacctgcaacgttcaacg	Protospacer
**** **** ************

1208. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4756224-4756245, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgatcaacgttcaacg	Protospacer
*******  *************

1209. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 4806595-4806616, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1210. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5082936-5082957, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgtgcaacg	Protospacer
******* ******** *****

1211. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5138230-5138251, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaaccttcaacgcccaacg	Protospacer
***************..*****

1212. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5173190-5173211, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttgaacgttcaacgttcaacg	Protospacer
*** *** **************

1213. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5232273-5232294, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacattcaacg	Protospacer
******* ******.*******

1214. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5267277-5267298, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1215. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5502285-5502306, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcgaccttcaaccttcaacg	Protospacer
****.********* *******

1216. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5506807-5506828, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1217. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 5767649-5767670, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacg	CRISPR spacer
gttgaacgttcaacgttcaacg	Protospacer
*** *** **************

1218. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 889864-889882, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacccccaacg	Protospacer
************..*****

1219. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485273-1485291, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1220. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485280-1485298, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1221. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485287-1485305, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1222. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485294-1485312, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1223. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485301-1485319, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1224. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485315-1485333, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1225. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485322-1485340, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1226. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485329-1485347, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1227. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485336-1485354, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1228. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485343-1485361, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1229. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485350-1485368, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1230. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485357-1485375, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1231. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485378-1485396, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1232. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1485407-1485425, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1233. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1573661-1573679, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgcgcaaccttcaacg	Protospacer
*****. ************

1234. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687636-1687654, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacactcaacg	Protospacer
*********** .******

1235. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687664-1687682, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1236. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687671-1687689, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1237. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687685-1687703, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacactcaacg	Protospacer
*********** .******

1238. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1687741-1687759, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacactcaacg	Protospacer
*********** .******

1239. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1893946-1893964, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgtgcaacg	Protospacer
*********** * *****

1240. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1894158-1894176, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgtgcaacg	Protospacer
*********** * *****

1241. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1905018-1905036, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgtccaacg	Protospacer
*********** *.*****

1242. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2016937-2016955, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1243. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2451178-2451196, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacctccaacg	Protospacer
**** ********.*****

1244. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538169-2538187, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1245. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2538176-2538194, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1246. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3101084-3101102, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1247. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3667702-3667720, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccctcaaccttcaacg	Protospacer
**** .*************

1248. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3765449-3765467, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1249. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3765491-3765509, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1250. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3765575-3765593, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1251. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3765596-3765614, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttccacctgcaacg	Protospacer
******** **** *****

1252. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3771934-3771952, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1253. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3922820-3922838, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttccacgttcaacg	Protospacer
******** ** *******

1254. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4130730-4130748, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcgaccttcaacg	Protospacer
**** ***.**********

1255. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4182143-4182161, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttccacg	Protospacer
**** ********** ***

1256. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4306760-4306778, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaccctgcaacg	Protospacer
********* *** *****

1257. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4352107-4352125, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacctgcaacg	Protospacer
**** ******** *****

1258. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4727053-4727071, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccctcaaccttcaacg	Protospacer
**** .*************

1259. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4806588-4806606, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1260. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5082908-5082926, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgcgcaaccttcaacg	Protospacer
*****. ************

1261. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5082936-5082954, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgtgcaacg	Protospacer
*********** * *****

1262. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5265474-5265492, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1263. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5267241-5267259, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccctcaaccttcaacg	Protospacer
**** .*************

1264. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5267270-5267288, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1265. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 363073-363091, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccctcaaccttcaacg	Protospacer
**** .*************

1266. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 363283-363301, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccctcaacg	Protospacer
**** *******.******

1267. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 363332-363350, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccctcaacg	Protospacer
**** *******.******

1268. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 363416-363434, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccctcaacg	Protospacer
**** *******.******

1269. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1238511-1238529, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaactttcaacg	Protospacer
****** ****.*******

1270. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1356187-1356205, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccctcaacg	Protospacer
**** *******.******

1271. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1356209-1356227, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1272. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1356246-1356264, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccctcaacg	Protospacer
**** *******.******

1273. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1505719-1505737, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttccacg	Protospacer
**** ********** ***

1274. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1505740-1505758, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacctttaaccttcaacg	Protospacer
**** **.***********

1275. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1562023-1562041, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttccacg	Protospacer
**** ********** ***

1276. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1586048-1586066, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1277. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1679129-1679147, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttgaacgttcaacg	Protospacer
******* *** *******

1278. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724587-1724605, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1279. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724609-1724627, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1280. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724631-1724649, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1281. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724720-1724738, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1282. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1724780-1724798, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1283. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1821641-1821659, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttgaacgttcaacg	Protospacer
******* *** *******

1284. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2390287-2390305, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgtgcaacattcaacg	Protospacer
****** **** *******

1285. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2390294-2390312, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacattcaacgttcaacg	Protospacer
****.****** *******

1286. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526027-2526045, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaccctgcaacg	Protospacer
********* *** *****

1287. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526292-2526310, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1288. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 2526425-2526443, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacccgcaacg	Protospacer
************. *****

1289. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068613-3068631, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1290. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068663-3068681, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1291. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068670-3068688, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1292. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068726-3068744, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1293. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068733-3068751, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttcaacgctcaacg	Protospacer
*********** .******

1294. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3068740-3068758, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1295. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3471403-3471421, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttgcaccttcaacg	Protospacer
*******  **********

1296. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3498109-3498127, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttgaacg	Protospacer
**** ********* ****

1297. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 3695975-3695993, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacctgcaacg	Protospacer
*****.******* *****

1298. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4067432-4067450, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccgtcaacg	Protospacer
**** ******* ******

1299. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4067502-4067520, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccgtcaacg	Protospacer
**** ******* ******

1300. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4067544-4067562, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccgtcaacg	Protospacer
**** ******* ******

1301. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655716-4655734, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1302. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655788-4655806, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctccaccttcaacg	Protospacer
*****.** **********

1303. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655802-4655820, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctccaccttcaacg	Protospacer
*****.** **********

1304. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655860-4655878, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1305. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4655924-4655942, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1306. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 4756227-4756245, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgatcaacgttcaacg	Protospacer
***** ***** *******

1307. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042178-5042196, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1308. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042318-5042336, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1309. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042403-5042421, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1310. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042431-5042449, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1311. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042459-5042477, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1312. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042487-5042505, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1313. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042544-5042562, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaaccttcaccg	Protospacer
**** *********** **

1314. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042600-5042618, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacatccaaccttcaacg	Protospacer
****.*.************

1315. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5042628-5042646, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgttgaacgttcaacg	Protospacer
******* *** *******

1316. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5137984-5138002, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caacgctcaacgttcaacg	Protospacer
*****.***** *******

1317. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5550575-5550593, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1318. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5550627-5550645, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1319. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 5550716-5550734, mismatch: 2, identity: 0.895

caacgttcaaccttcaacg	CRISPR spacer
caaccttcaacgttcaacg	Protospacer
**** ****** *******

1320. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 363077-363098, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaacgttcaacc	Protospacer
**.*********** *******

1321. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 889850-889871, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaacgttcaaccctcaacc	Protospacer
******* *******.******

1322. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1679213-1679234, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaacctgcaacgttcaacc	Protospacer
********* **** *******

1323. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1679297-1679318, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaacccccaaccttcaacc	Protospacer
********..************

1324. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1679304-1679325, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaacccccaacc	Protospacer
***************..*****

1325. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1764934-1764955, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaccc	Protospacer
**.**************** **

1326. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 1900558-1900579, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaacctgcaacctgcaacc	Protospacer
********* ****** *****

1327. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2238846-2238867, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1328. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2238853-2238874, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccctcaaccttcaacc	Protospacer
**.*****.*************

1329. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2238881-2238902, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1330. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2238895-2238916, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1331. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2373235-2373256, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1332. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2373249-2373270, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1333. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2373263-2373284, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccttcaccc	Protospacer
**.**************** **

1334. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2480289-2480310, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaatcttcaacctccaacc	Protospacer
******.*********.*****

1335. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2562994-2563015, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaacccccaacc	Protospacer
***************..*****

1336. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 2669483-2669504, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttccaccttccacc	Protospacer
*********** ****** ***

1337. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3117318-3117339, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaacgttcaacgttcaacc	Protospacer
******* ****** *******

1338. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 3117353-3117374, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaacgttcaacgttcaacc	Protospacer
******* ****** *******

1339. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4067327-4067348, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccgcaaccttcaacctgcaacc	Protospacer
** ************* *****

1340. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4116953-4116974, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1341. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4397710-4397731, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccctcaaccttcaacc	Protospacer
**.*****.*************

1342. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 4397731-4397752, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccccaaccttcaacccttaacc	Protospacer
***************.*.****

1343. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5535836-5535857, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cccaaaccctcaaccttcaacc	Protospacer
*** ****.*************

1344. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5535843-5535864, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1345. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5535857-5535878, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccctcaaccttcaacc	Protospacer
**.*****.*************

1346. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5571168-5571189, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
ccgcaacctgcaaccttcaacc	Protospacer
** ****** ************

1347. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5572952-5572973, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1348. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5572966-5572987, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1349. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5572980-5573001, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1350. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5572994-5573015, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1351. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5573008-5573029, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1352. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5573050-5573071, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccttcaaccctcaacc	Protospacer
**.************.******

1353. spacer 29.2|1563387|22|NC_009523|CRISPRCasFinder matches to position: 5573057-5573078, mismatch: 2, identity: 0.909

ccccaaccttcaaccttcaacc	CRISPR spacer
cctcaaccctcaaccttcaacc	Protospacer
**.*****.*************

1354. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1893907-1893928, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1355. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1971413-1971434, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1356. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2314237-2314258, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccacatacc	Protospacer
*************** ** ***

1357. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2509367-2509388, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaccccccaacc	Protospacer
************ **** ****

1358. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2764186-2764207, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1359. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 3117161-3117182, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcacccttcaacccccaacc	Protospacer
***** *********** ****

1360. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 3667709-3667730, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1361. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 5232224-5232245, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1362. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 5573022-5573043, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1363. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 31001-31022, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1364. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 522532-522553, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1365. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1561131-1561152, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacgcccaacc	Protospacer
************** ** ****

1366. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1679332-1679353, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttccaccttcaacccccaacc	Protospacer
**** ************ ****

1367. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1764899-1764920, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1368. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1764920-1764941, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1369. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1770237-1770258, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1370. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1902761-1902782, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
ctgcaacctgcaaccccaaacc	Protospacer
** ****** ************

1371. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1902782-1902803, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
ctgcaacctgcaaccccaaacc	Protospacer
** ****** ************

1372. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1902803-1902824, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
ctgcaacctgcaaccccaaacc	Protospacer
** ****** ************

1373. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1902824-1902845, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
ctgcaacctgcaaccccaaacc	Protospacer
** ****** ************

1374. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 1902852-1902873, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
ctgcaacctgcaaccccaaacc	Protospacer
** ****** ************

1375. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2480219-2480240, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccgacc	Protospacer
***************** .***

1376. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2480240-2480261, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccgacc	Protospacer
***************** .***

1377. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2480261-2480282, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccccgacc	Protospacer
***************** .***

1378. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 2768214-2768235, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccgcaacc	Protospacer
****************  ****

1379. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 3230253-3230274, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacgcccaacc	Protospacer
************** ** ****

1380. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 4656845-4656866, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacccacaacc	Protospacer
****************  ****

1381. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 5067531-5067552, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaacctccaacc	Protospacer
***************.* ****

1382. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 5067545-5067566, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
ctccaaccttcaacccccaacc	Protospacer
**.************** ****

1383. spacer 29.3|1563436|22|NC_009523|CRISPRCasFinder matches to position: 5571182-5571203, mismatch: 2, identity: 0.909

cttcaaccttcaaccccaaacc	CRISPR spacer
cttcaaccttcaaccctcaacc	Protospacer
****************. ****

1384. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 690620-690641, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1385. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 889843-889864, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccctcaaccttcaacc	Protospacer
********.***** *******

1386. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 889857-889878, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacccccaacgttcaacc	Protospacer
********..************

1387. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 889920-889941, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaatgttcaacc	Protospacer
******* *****.********

1388. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1573682-1573703, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaacgtgcaacc	Protospacer
** ************* *****

1389. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1573710-1573731, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaaccttcaacc	Protospacer
** *********** *******

1390. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1573724-1573745, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaacgtgcaacc	Protospacer
** ************* *****

1391. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1812079-1812100, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1392. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1812190-1812211, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1393. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1820376-1820397, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1394. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2238909-2238930, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccctcaacc	Protospacer
************** .******

1395. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3117168-3117189, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcacccttcaacc	Protospacer
************ * *******

1396. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3117339-3117360, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaccgttcaccc	Protospacer
************ ****** **

1397. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3163913-3163934, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1398. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3163984-3164005, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1399. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3730664-3730685, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccttcaccc	Protospacer
************** **** **

1400. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4182084-4182105, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacctttaacc	Protospacer
************** **.****

1401. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4213310-4213331, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacctgccacgttcaacc	Protospacer
********* * **********

1402. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4213324-4213345, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacctgccacgttcaacc	Protospacer
********* * **********

1403. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4213338-4213359, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacctgccacgttcaacc	Protospacer
********* * **********

1404. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4213352-4213373, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacctgccacgttcaacc	Protospacer
********* * **********

1405. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4213366-4213387, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacctgccacgttcaacc	Protospacer
********* * **********

1406. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4306753-4306774, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaccctgcaacgttcaacc	Protospacer
***** *** ************

1407. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4352086-4352107, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaaccttcaacc	Protospacer
** *********** *******

1408. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4806602-4806623, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttgaacgttcaacgttcaacc	Protospacer
*** *** **************

1409. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5082845-5082866, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaaccttcaacc	Protospacer
** *********** *******

1410. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5173183-5173204, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcagcc	Protospacer
******* ***********.**

1411. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5232266-5232287, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacattcaacgtccaacc	Protospacer
******* ********.*****

1412. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5267284-5267305, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttgaacgttcaacgttcaacc	Protospacer
*** *** **************

1413. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5471422-5471443, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1414. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 363063-363084, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccctcaacc	Protospacer
************** .******

1415. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 363322-363343, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttccaccttcaaccttcaacc	Protospacer
**** ********* *******

1416. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 363371-363392, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttccaccttcaaccttcaacc	Protospacer
**** ********* *******

1417. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 363434-363455, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttccaccttcaaccttcaacc	Protospacer
**** ********* *******

1418. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1062754-1062775, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1419. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1062843-1062864, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1420. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1164821-1164842, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaacgtgcaacc	Protospacer
** ************* *****

1421. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1356141-1356162, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacctgcaacc	Protospacer
************** * *****

1422. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1586031-1586052, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaaccttcaacc	Protospacer
******* ****** *******

1423. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1586059-1586080, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaaccttcaacc	Protospacer
******* ****** *******

1424. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1720542-1720563, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcagccttcaaccttcaacc	Protospacer
*****.******** *******

1425. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1720695-1720716, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccctcaaccttcaacc	Protospacer
********.***** *******

1426. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1770216-1770237, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaaccttcaacc	Protospacer
** *********** *******

1427. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 1872710-1872731, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1428. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2368412-2368433, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaatcttcaaccttcaacc	Protospacer
******.******* *******

1429. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2480449-2480470, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtccaaccttcaactttcaacc	Protospacer
**.*********** *******

1430. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2526087-2526108, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgtgcaacc	Protospacer
******* ******** *****

1431. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2526268-2526289, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaaccttcaacc	Protospacer
******* ****** *******

1432. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2526429-2526450, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacccgcaacgttcaacc	Protospacer
********. ************

1433. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2547913-2547934, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaacgtgcaacc	Protospacer
** ************* *****

1434. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2547927-2547948, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaacgtgcaacc	Protospacer
** ************* *****

1435. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2547941-2547962, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaacgtgcaacc	Protospacer
** ************* *****

1436. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2562750-2562771, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaacgtccaccc	Protospacer
****************.** **

1437. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 2669434-2669455, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gtgcaaccttcaaccttcaacc	Protospacer
** *********** *******

1438. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3480666-3480687, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1439. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 3803588-3803609, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgtgcaacgttcaacc	Protospacer
******* * ************

1440. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4438210-4438231, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaccttcaaccctcaacc	Protospacer
************** .******

1441. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 4656080-4656101, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaaccttcaacc	Protospacer
******* ****** *******

1442. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5042632-5042653, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttgaacgttcaacgttcaacc	Protospacer
*** *** **************

1443. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5042639-5042660, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaaccttcaacc	Protospacer
******* ****** *******

1444. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5173198-5173219, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttgaacgttcaacgttcaacc	Protospacer
*** *** **************

1445. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5506800-5506821, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaaggttcaacgttcaacc	Protospacer
******  **************

1446. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to position: 5551584-5551605, mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacctgcaaccttcaacc	Protospacer
********* **** *******

1447. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 20603-20624, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1448. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 611185-611206, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaacctgcaacc	Protospacer
************** * *****

1449. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 710983-711004, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1450. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 711063-711084, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1451. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1573696-1573717, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgtgcaacc	Protospacer
******* ******** *****

1452. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1573717-1573738, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgtgcaaccttcaacc	Protospacer
********* **** *******

1453. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1893914-1893935, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1454. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1971420-1971441, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1455. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1971427-1971448, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1456. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1971434-1971455, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1457. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1971441-1971462, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1458. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1971448-1971469, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1459. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1971455-1971476, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1460. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2314244-2314265, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1461. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2314251-2314272, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1462. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2314258-2314279, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1463. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2314265-2314286, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1464. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2677706-2677727, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1465. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2677713-2677734, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1466. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2677720-2677741, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1467. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2677727-2677748, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1468. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2765653-2765674, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1469. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2765660-2765681, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1470. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2765667-2765688, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1471. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 3329128-3329149, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1472. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 3329135-3329156, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1473. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 3471350-3471371, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgtacaacc	Protospacer
******* ******** *****

1474. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 3759874-3759895, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgtgcaactttcaacc	Protospacer
********* **** *******

1475. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 3922792-3922813, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1476. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4018551-4018572, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1477. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4018572-4018593, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgcccaacgttcaacc	Protospacer
********..************

1478. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4182150-4182171, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1479. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5082824-5082845, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgttcaccc	Protospacer
******* *********** **

1480. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5082838-5082859, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1481. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5168026-5168047, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1482. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5232231-5232252, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1483. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5232238-5232259, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1484. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5573029-5573050, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1485. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 30952-30973, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1486. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 30959-30980, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1487. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 30966-30987, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1488. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 30973-30994, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1489. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 30980-31001, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1490. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 30987-31008, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1491. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 30994-31015, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1492. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 73091-73112, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1493. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 363378-363399, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1494. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 363385-363406, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1495. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 363441-363462, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1496. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 517203-517224, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgttcaaccctcaacc	Protospacer
************** .******

1497. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 522518-522539, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1498. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 522525-522546, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1499. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 917877-917898, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1500. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 921876-921897, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1501. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 921883-921904, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1502. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 921897-921918, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgttcaccc	Protospacer
******* *********** **

1503. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1164807-1164828, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgtgcaacc	Protospacer
******* ******** *****

1504. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1177604-1177625, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1505. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1177611-1177632, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1506. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1290388-1290409, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1507. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1290395-1290416, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1508. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1505702-1505723, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
ctacaacgttcaaccttcaacc	Protospacer
** *********** *******

1509. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1505744-1505765, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
ctttaaccttcaacgttcaacc	Protospacer
***.*** **************

1510. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1562006-1562027, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1511. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1562013-1562034, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1512. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1770223-1770244, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1513. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1770230-1770251, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1514. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1770258-1770279, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1515. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1818835-1818856, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaactttcaacc	Protospacer
******* ****** *******

1516. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1821689-1821710, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1517. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1821696-1821717, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1518. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1821703-1821724, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1519. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1821710-1821731, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1520. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1821739-1821760, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1521. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1821746-1821767, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1522. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1821753-1821774, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1523. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 1821760-1821781, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1524. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2390474-2390495, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgtgcaacc	Protospacer
******* ******** *****

1525. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2390481-2390502, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgtgcaaccttcaacc	Protospacer
********* **** *******

1526. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2480456-2480477, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaactttcaaccttcaacc	Protospacer
******* ****** *******

1527. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2562932-2562953, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgttcaccc	Protospacer
******* *********** **

1528. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2563037-2563058, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaacgttcaccc	Protospacer
******* *********** **

1529. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2669441-2669462, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1530. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2669448-2669469, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1531. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2842004-2842025, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1532. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 2842011-2842032, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1533. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 3508124-3508145, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaacgtgcaacgtgcaacc	Protospacer
********* ****** *****

1534. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4068454-4068475, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1535. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4112174-4112195, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1536. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4116974-4116995, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1537. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4222832-4222853, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1538. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4222874-4222895, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1539. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4491554-4491575, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1540. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4491561-4491582, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1541. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4491568-4491589, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1542. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4656873-4656894, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaactttcaacc	Protospacer
******* ****** *******

1543. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4656922-4656943, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaactttcaacc	Protospacer
******* ****** *******

1544. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4656950-4656971, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1545. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4656957-4656978, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1546. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4656971-4656992, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaactttcaacc	Protospacer
******* ****** *******

1547. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4656999-4657020, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1548. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4657006-4657027, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1549. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4657013-4657034, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1550. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4657020-4657041, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1551. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 4882245-4882266, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1552. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5067452-5067473, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1553. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5067459-5067480, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1554. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5067466-5067487, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1555. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5136962-5136983, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1556. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5136969-5136990, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1557. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5136976-5136997, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1558. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5136983-5137004, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1559. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5136990-5137011, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1560. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5136997-5137018, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1561. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5137004-5137025, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1562. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5137011-5137032, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1563. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5137018-5137039, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1564. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5138082-5138103, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1565. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5217058-5217079, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1566. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5506835-5506856, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1567. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5506870-5506891, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1568. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5506877-5506898, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1569. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5506884-5506905, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1570. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5538613-5538634, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1571. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5538620-5538641, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1572. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5538627-5538648, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1573. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5538664-5538685, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1574. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5538671-5538692, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1575. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5538708-5538729, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1576. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5538715-5538736, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1577. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to position: 5538722-5538743, mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
cttcaaccttcaaccttcaacc	Protospacer
******* ****** *******

1578. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 889934-889955, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
ctgcaacgttcaacgttcaacg	Protospacer
** **** **************

1579. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 2016937-2016958, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1580. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 2451178-2451199, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacctccaacg	Protospacer
************** *.*****

1581. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3100978-3100999, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1582. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3100992-3101013, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1583. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3101006-3101027, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1584. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3101091-3101112, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1585. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3667702-3667723, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccctcaaccttcaacg	Protospacer
********.***** *******

1586. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3765456-3765477, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttccacctgcaacgttcaacg	Protospacer
**** **** ************

1587. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3765498-3765519, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttccacctgcaacgttcaacg	Protospacer
**** **** ************

1588. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3765540-3765561, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
ctgcaacgttcaacgttcaacg	Protospacer
** **** **************

1589. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3765547-3765568, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttccacctgcaacgttcaacg	Protospacer
**** **** ************

1590. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3765582-3765603, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
ctgcaacgttcaacgttcaacg	Protospacer
** **** **************

1591. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3771934-3771955, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1592. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3999034-3999055, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaactttcaaccttcaacg	Protospacer
*******.****** *******

1593. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4130730-4130751, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcgaccttcaacg	Protospacer
***********.** *******

1594. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4182143-4182164, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttccacg	Protospacer
************** *** ***

1595. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4727053-4727074, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccctcaaccttcaacg	Protospacer
********.***** *******

1596. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4922100-4922121, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
ctgcaaccttcaacgtgcaacg	Protospacer
** ************* *****

1597. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5267241-5267262, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccctcaaccttcaacg	Protospacer
********.***** *******

1598. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 240540-240561, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1599. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 363070-363091, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccctcaaccttcaacg	Protospacer
********.***** *******

1600. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 363084-363105, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1601. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 363280-363301, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccctcaacg	Protospacer
************** .******

1602. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 363329-363350, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccctcaacg	Protospacer
************** .******

1603. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1356184-1356205, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccctcaacg	Protospacer
************** .******

1604. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1505716-1505737, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttccacg	Protospacer
************** *** ***

1605. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1562020-1562041, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttccacg	Protospacer
************** *** ***

1606. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1564866-1564887, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacggttaacg	Protospacer
*************** *.****

1607. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1722546-1722567, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgcccaacg	Protospacer
***************..*****

1608. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 1722574-1722595, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgcccaacg	Protospacer
***************..*****

1609. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 2525989-2526010, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
ctgcaaccttcaaccttcaacg	Protospacer
** *********** *******

1610. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 2526289-2526310, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgctcaacgttcaacg	Protospacer
******* .*************

1611. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 2563030-2563051, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
ctacaaccttcaaccttcaacg	Protospacer
** *********** *******

1612. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3068695-3068716, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1613. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3068709-3068730, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1614. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3068723-3068744, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgctcaacgttcaacg	Protospacer
******* .*************

1615. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 3068765-3068786, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacgttcaaccttcaacg	Protospacer
******* ****** *******

1616. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4655879-4655900, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
ctcccaccttcaacgttcaacg	Protospacer
**.* *****************

1617. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4657034-4657055, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaacgtccaccg	Protospacer
****************.** **

1618. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 4756304-4756325, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaacccgcaacgttcaacg	Protospacer
********. ************

1619. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5041978-5041999, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1620. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042006-5042027, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1621. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042034-5042055, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1622. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042090-5042111, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1623. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042118-5042139, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1624. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042147-5042168, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1625. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042175-5042196, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1626. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042203-5042224, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1627. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042259-5042280, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1628. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042287-5042308, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1629. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042315-5042336, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1630. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042343-5042364, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1631. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042372-5042393, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1632. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042400-5042421, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1633. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042428-5042449, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1634. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042456-5042477, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1635. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042484-5042505, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1636. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042513-5042534, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1637. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042541-5042562, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaaccttcaccg	Protospacer
************** **** **

1638. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to position: 5042570-5042591, mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
cttcaaccttcaactttcaccg	Protospacer
************** **** **

1639. spacer 31.1|1721749|30|NC_009523|CRISPRCasFinder matches to position: 1195320-1195349, mismatch: 2, identity: 0.933

gtagcggattatttattcaaagaccataat	CRISPR spacer
gtggcggattatttcttcaaagaccataat	Protospacer
**.*********** ***************

1640. spacer 31.1|1721749|30|NC_009523|CRISPRCasFinder matches to position: 2543498-2543527, mismatch: 2, identity: 0.933

gtagcggattatttattcaaagaccataat	CRISPR spacer
gtagcggattatttactcaaagaccattat	Protospacer
***************.*********** **

1641. spacer 31.1|1721749|30|NC_009523|CRISPRCasFinder matches to position: 2891792-2891821, mismatch: 2, identity: 0.933

gtagcggattatttattcaaagaccataat	CRISPR spacer
gtggcggattatttcttcaaagaccataat	Protospacer
**.*********** ***************

1642. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 268562-268597, mismatch: 2, identity: 0.944

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgccttggatagccgagggcgtatggtctttgaaga	Protospacer
****.*************** ***************

1643. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 268630-268665, mismatch: 2, identity: 0.944

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgccttggatagccgagggcgtatggtctttgaaga	Protospacer
****.*************** ***************

1644. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 1462408-1462443, mismatch: 2, identity: 0.944

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgccttggctagccgagggcttatggtctttgaaga	Protospacer
****.*** ***************************

1645. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 1257857-1257892, mismatch: 2, identity: 0.944

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgccttggctagccgagggcttatggtctttgaaga	Protospacer
****.*** ***************************

1646. spacer 35.1|1889843|36|NC_009523|CRISPRCasFinder matches to position: 2860857-2860892, mismatch: 2, identity: 0.944

cgccctggatagccgagggcttatggtctttgaaga	CRISPR spacer
cgtcctggatagccgagggctgatggtctttgaaga	Protospacer
**.****************** **************

1647. spacer 40.1|2227802|45|NC_009523|CRISPRCasFinder matches to position: 17751-17795, mismatch: 2, identity: 0.956

ctccagcccgcgcaggcgggcttcgccttgcctggccgagggctt	CRISPR spacer
ctccagcccgcgcaggcgggcttcgccttgcatagccgagggctt	Protospacer
******************************* *.***********

1648. spacer 40.1|2227802|45|NC_009523|CRISPRCasFinder matches to position: 487952-487996, mismatch: 2, identity: 0.956

ctccagcccgcgcaggcgggcttcgccttgcctggccgagggctt	CRISPR spacer
ctacagcccgcgcaggcgggcttcgccttgcctagccgagggctt	Protospacer
** ******************************.***********

1649. spacer 40.1|2227802|45|NC_009523|CRISPRCasFinder matches to position: 1770050-1770094, mismatch: 2, identity: 0.956

ctccagcccgcgcaggcgggcttcgccttgcctggccgagggctt	CRISPR spacer
ctacagcccgcgcaggcgggcttcgccttgcctagccgagggctt	Protospacer
** ******************************.***********

1650. spacer 40.1|2227802|45|NC_009523|CRISPRCasFinder matches to position: 2137760-2137804, mismatch: 2, identity: 0.956

ctccagcccgcgcaggcgggcttcgccttgcctggccgagggctt	CRISPR spacer
ctacagcccgcgcaggcgggcttcgccttgcctagccgagggctt	Protospacer
** ******************************.***********

1651. spacer 40.1|2227802|45|NC_009523|CRISPRCasFinder matches to position: 3421902-3421946, mismatch: 2, identity: 0.956

ctccagcccgcgcaggcgggcttcgccttgcctggccgagggctt	CRISPR spacer
ctctcgcccgcgcaggcgggcttcgccttgcctggccgagggctt	Protospacer
***. ****************************************

1652. spacer 40.1|2227802|45|NC_009523|CRISPRCasFinder matches to position: 5135496-5135540, mismatch: 2, identity: 0.956

ctccagcccgcgcaggcgggcttcgccttgcctggccgagggctt	CRISPR spacer
ctccagcccgcgcaggcgggcttcgccttgcctagccgagagctt	Protospacer
*********************************.******.****

1653. spacer 40.1|2227802|45|NC_009523|CRISPRCasFinder matches to position: 723036-723080, mismatch: 2, identity: 0.956

ctccagcccgcgcaggcgggcttcgccttgcctggccgagggctt	CRISPR spacer
ctccagcccgcgcaggcgggcttcgccttgcatagccgagggctt	Protospacer
******************************* *.***********

1654. spacer 40.1|2227802|45|NC_009523|CRISPRCasFinder matches to position: 5132769-5132813, mismatch: 2, identity: 0.956

ctccagcccgcgcaggcgggcttcgccttgcctggccgagggctt	CRISPR spacer
ctacagcccgcgcaggcgggcttcgccttgcctagccgagggctt	Protospacer
** ******************************.***********

1655. spacer 41.1|2230878|44|NC_009523|CRISPRCasFinder matches to position: 5637393-5637436, mismatch: 2, identity: 0.955

gagcggaataattactcaaagaccataagccctcggctgtccag	CRISPR spacer
gagcggaacaattactcaaagaccataagccctcggctatccag	Protospacer
********.*****************************.*****

1656. spacer 48.1|2403838|44|NC_009523|CRISPRCasFinder matches to position: 771745-771788, mismatch: 2, identity: 0.955

attccatagccgagggcttatggtctttgaataaataatccggt	CRISPR spacer
attccatagccgagggcttatggactttgaagaaataatccggt	Protospacer
*********************** ******* ************

1657. spacer 48.1|2403838|44|NC_009523|CRISPRCasFinder matches to position: 1009282-1009325, mismatch: 2, identity: 0.955

attccatagccgagggcttatggtctttgaataaataatccggt	CRISPR spacer
attccatagccgagggcttatggtctttgaagaaataattcggt	Protospacer
******************************* *******.****

1658. spacer 48.1|2403838|44|NC_009523|CRISPRCasFinder matches to position: 4366095-4366138, mismatch: 2, identity: 0.955

attccatagccgagggcttatggtctttgaataaataatccggt	CRISPR spacer
attccgtagccgagggcttatggtctttgaagaaataatccggt	Protospacer
*****.************************* ************

1659. spacer 50.1|2491859|37|NC_009523|CRISPRCasFinder matches to position: 579735-579771, mismatch: 2, identity: 0.946

ataattactcaatgaccataagccctcggctatccag	CRISPR spacer
ataattactcaaagaccataagccctcggctaaccag	Protospacer
************ ******************* ****

1660. spacer 50.1|2491859|37|NC_009523|CRISPRCasFinder matches to position: 3639475-3639511, mismatch: 2, identity: 0.946

ataattactcaatgaccataagccctcggctatccag	CRISPR spacer
ataattactcaaagaccataagccctcggctagccag	Protospacer
************ ******************* ****

1661. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 185557-185579, mismatch: 2, identity: 0.913

tcgatagccgatagccgatagcc	CRISPR spacer
tcgatagccgataatcgatagcc	Protospacer
*************..********

1662. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 268886-268908, mismatch: 2, identity: 0.913

tcgatagccgatagccgatagcc	CRISPR spacer
tcgataaccgataaccgatagcc	Protospacer
******.******.*********

1663. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 1213613-1213635, mismatch: 2, identity: 0.913

tcgatagccgatagccgatagcc	CRISPR spacer
tcgatagccgatagccgacaacc	Protospacer
******************.*.**

1664. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 4769260-4769282, mismatch: 2, identity: 0.913

tcgatagccgatagccgatagcc	CRISPR spacer
tccatagccgatagctgatagcc	Protospacer
** ************.*******

1665. spacer 52.1|2630306|23|NC_009523|CRISPRCasFinder matches to position: 5328292-5328314, mismatch: 2, identity: 0.913

tcgatagccgatagccgatagcc	CRISPR spacer
tcgatagccgataatcgatagcc	Protospacer
*************..********

1666. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 268549-268592, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggatagccgagggcgtatggtctttgaagaaataatccggtat	Protospacer
*************** *************.**************

1667. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 268617-268660, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggatagccgagggcgtatggtctttgaagaaataatccggtat	Protospacer
*************** *************.**************

1668. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 1257862-1257905, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggctagccgagggcttatggtctttgaagaaataatccggtat	Protospacer
*** *************************.**************

1669. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 1462395-1462438, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggctagccgagggcttatggtctttgaagaaataatccggtat	Protospacer
*** *************************.**************

1670. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 1827436-1827479, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggctagccgagggcttatggtctttgaataaataatccggtat	Protospacer
*** ************************* **************

1671. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 3652891-3652934, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggctagccgagggcttatggtctttgaataaataatccggtat	Protospacer
*** ************************* **************

1672. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 3687088-3687131, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggatagccgagggcttatggtctttgaataaataatctggtat	Protospacer
***************************** ********.*****

1673. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 3852381-3852424, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggatagccgagggcttatggtctttgaataaataatccgctat	Protospacer
***************************** ********** ***

1674. spacer 54.1|3064510|44|NC_009523|CRISPRCasFinder matches to position: 4699922-4699965, mismatch: 2, identity: 0.955

tggatagccgagggcttatggtctttgaaaaaataatccggtat	CRISPR spacer
tggctagccgagggcttatggtctttgaagaaataatccggtat	Protospacer
*** *************************.**************

1675. spacer 61.1|3334464|44|NC_009523|CRISPRCasFinder matches to position: 562474-562517, mismatch: 2, identity: 0.955

ctggctagccgagggcttatggtctttgaagaaataatccgata	CRISPR spacer
ctggctagccgagggcttatggtctttgaataaataatccgcta	Protospacer
****************************** ********** **

1676. spacer 61.1|3334464|44|NC_009523|CRISPRCasFinder matches to position: 1827435-1827478, mismatch: 2, identity: 0.955

ctggctagccgagggcttatggtctttgaagaaataatccgata	CRISPR spacer
ctggctagccgagggcttatggtctttgaataaataatccggta	Protospacer
****************************** **********.**

1677. spacer 61.1|3334464|44|NC_009523|CRISPRCasFinder matches to position: 3652890-3652933, mismatch: 2, identity: 0.955

ctggctagccgagggcttatggtctttgaagaaataatccgata	CRISPR spacer
ctggctagccgagggcttatggtctttgaataaataatccggta	Protospacer
****************************** **********.**

1678. spacer 61.1|3334464|44|NC_009523|CRISPRCasFinder matches to position: 4126059-4126102, mismatch: 2, identity: 0.955

ctggctagccgagggcttatggtctttgaagaaataatccgata	CRISPR spacer
ctggatagccgagggcttatggtctttgaagaaataatccggta	Protospacer
**** ************************************.**

1679. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 1341629-1341657, mismatch: 2, identity: 0.931

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcgcggcgaagcccgcctgcgcgggctg	Protospacer
***. ************************

1680. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to position: 2498205-2498233, mismatch: 2, identity: 0.931

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ggcgaggcaaagcccgcctgcgcgggctg	Protospacer
***.****.********************

1681. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 232656-232695, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctcgagcggattat	Protospacer
****************************  **********

1682. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 233148-233187, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctcgagcggattat	Protospacer
****************************  **********

1683. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 315072-315111, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctataccggattat	Protospacer
****************************.** ********

1684. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 584917-584956, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctatggcggattat	Protospacer
****************************.*.*********

1685. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 585053-585092, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctatggcggattat	Protospacer
****************************.*.*********

1686. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 1570052-1570091, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctatggcggattat	Protospacer
****************************.*.*********

1687. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 1731643-1731682, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctataccggattat	Protospacer
****************************.** ********

1688. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 1827468-1827507, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctataccggattat	Protospacer
****************************.** ********

1689. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 3652855-3652894, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctataccggattat	Protospacer
****************************.** ********

1690. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 3715611-3715650, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctatggcggattat	Protospacer
****************************.*.*********

1691. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 3925220-3925259, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctatggcggattat	Protospacer
****************************.*.*********

1692. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 4327527-4327566, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctagagcggattat	Protospacer
****************************. **********

1693. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 5360965-5361004, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctataccggattat	Protospacer
****************************.** ********

1694. spacer 63.1|3639507|40|NC_009523|CRISPRCasFinder matches to position: 5558210-5558249, mismatch: 2, identity: 0.95

gccagggcgaagcccgcctgcgcgggctgtagcggattat	CRISPR spacer
gccagggcgaagcccgcctgcgcgggctatggcggattat	Protospacer
****************************.*.*********

1695. spacer 64.1|3645814|43|NC_009523|CRISPRCasFinder matches to position: 988086-988128, mismatch: 2, identity: 0.953

tggagcggattatgtactcaaagaccataagccctcggctatg	CRISPR spacer
tgtagcggattatttactcaaagaccataagccctcggctatg	Protospacer
** ********** *****************************

1696. spacer 64.1|3645814|43|NC_009523|CRISPRCasFinder matches to position: 1877124-1877166, mismatch: 2, identity: 0.953

tggagcggattatgtactcaaagaccataagccctcggctatg	CRISPR spacer
tgtagcggattatttactcaaagaccataagccctcggctatg	Protospacer
** ********** *****************************

1697. spacer 64.1|3645814|43|NC_009523|CRISPRCasFinder matches to position: 3282638-3282680, mismatch: 2, identity: 0.953

tggagcggattatgtactcaaagaccataagccctcggctatg	CRISPR spacer
tgtagcggattatttactcaaagaccataagccctcggctatg	Protospacer
** ********** *****************************

1698. spacer 64.1|3645814|43|NC_009523|CRISPRCasFinder matches to position: 3475707-3475749, mismatch: 2, identity: 0.953

tggagcggattatgtactcaaagaccataagccctcggctatg	CRISPR spacer
tgtagcggattatttactcaaagaccataagccctcggctatg	Protospacer
** ********** *****************************

1699. spacer 64.1|3645814|43|NC_009523|CRISPRCasFinder matches to position: 3639534-3639576, mismatch: 2, identity: 0.953

tggagcggattatgtactcaaagaccataagccctcggctatg	CRISPR spacer
tgtagcggattatttactcaaagaccataagccctcggctatg	Protospacer
** ********** *****************************

1700. spacer 65.1|3647324|43|NC_009523|CRISPRCasFinder matches to position: 5096010-5096052, mismatch: 2, identity: 0.953

gagcggaatatttcttcaaagaccataagccctcggctagcca	CRISPR spacer
gagcggattatttcttcaaagaccataagccctcggctatcca	Protospacer
******* ******************************* ***

1701. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1356126-1356144, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttctaacgttc	Protospacer
***********.*** ***

1702. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1356169-1356187, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
ctgcaacattccaaccttc	Protospacer
** **** ***********

1703. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 1900647-1900665, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttataaccttc	Protospacer
********** .*******

1704. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2563022-2563040, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccctacaaccttc	Protospacer
********.* ********

1705. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4656051-4656069, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttcccaccttc	Protospacer
******* **** ******

1706. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4882230-4882248, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttacaaccttc	Protospacer
******* ** ********

1707. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5137025-5137043, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaacccttc	Protospacer
*********** * *****

1708. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538634-5538652, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaacccttc	Protospacer
*********** * *****

1709. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538641-5538659, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacccttcaaccttc	Protospacer
********.*.********

1710. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538649-5538667, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaacccttc	Protospacer
*********** * *****

1711. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538656-5538674, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacccttcaaccttc	Protospacer
********.*.********

1712. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538678-5538696, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaacccttc	Protospacer
*********** * *****

1713. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538685-5538703, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacccttcaaccttc	Protospacer
********.*.********

1714. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538693-5538711, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaacccttc	Protospacer
*********** * *****

1715. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538700-5538718, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacccttcaaccttc	Protospacer
********.*.********

1716. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5538729-5538747, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaacccttc	Protospacer
*********** * *****

1717. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5550660-5550678, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaacgttc	Protospacer
******* ******* ***

1718. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5726363-5726381, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccgccttc	Protospacer
************ .*****

1719. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5726385-5726403, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccgccttc	Protospacer
************ .*****

1720. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5726414-5726432, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccgccttc	Protospacer
************ .*****

1721. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 43237-43255, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccagccttc	Protospacer
******* *****.*****

1722. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 2314290-2314308, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcccacgttc	Protospacer
************ ** ***

1723. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 3998905-3998923, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaacccttc	Protospacer
*********** * *****

1724. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 3998935-3998953, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgtcccaaccttc	Protospacer
******* *.*********

1725. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4727006-4727024, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttcaacccttc	Protospacer
*********** * *****

1726. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 4977670-4977688, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttataaccttc	Protospacer
********** .*******

1727. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5232206-5232224, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaaccttacaaccctc	Protospacer
********** *****.**

1728. spacer 76.2|4112145|19|NC_009523|CRISPRCasFinder matches to position: 5267230-5267248, mismatch: 2, identity: 0.895

cttcaaccttccaaccttc	CRISPR spacer
cttcaacgttccaactttc	Protospacer
******* *******.***

1729. spacer 77.1|4182407|44|NC_009523|CRISPRCasFinder matches to position: 1009282-1009325, mismatch: 2, identity: 0.955

attccatagccgagggcttatggactttgaagaaataatccggt	CRISPR spacer
attccatagccgagggcttatggtctttgaagaaataattcggt	Protospacer
*********************** ***************.****

1730. spacer 77.1|4182407|44|NC_009523|CRISPRCasFinder matches to position: 2327102-2327145, mismatch: 2, identity: 0.955

attccatagccgagggcttatggactttgaagaaataatccggt	CRISPR spacer
attccatagccgagggcttatggtctttgaataaataatccggt	Protospacer
*********************** ******* ************

1731. spacer 77.1|4182407|44|NC_009523|CRISPRCasFinder matches to position: 4366095-4366138, mismatch: 2, identity: 0.955

attccatagccgagggcttatggactttgaagaaataatccggt	CRISPR spacer
attccgtagccgagggcttatggtctttgaagaaataatccggt	Protospacer
*****.***************** ********************

1732. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 17753-17794, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tccagcccgcgcaggcgggcttcgccttgcatagccgagggc	Protospacer
**.***********************.***************

1733. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 720625-720666, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgctttgcatagccgagggc	Protospacer
*************************..***************

1734. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 723037-723078, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tccagcccgcgcaggcgggcttcgccttgcatagccgagggc	Protospacer
**.***********************.***************

1735. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 983082-983123, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgcctcgcatagccgagggc	Protospacer
**************************..**************

1736. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 1829441-1829482, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccttggatagccgagggc	Protospacer
**************************.** ************

1737. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 1877076-1877117, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgcctcgcatagccgagggc	Protospacer
**************************..**************

1738. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 2171045-2171086, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggctttgccttgcatagccgagggc	Protospacer
**********************.***.***************

1739. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 2230838-2230879, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggctttgccttgcatagccgagggc	Protospacer
**********************.***.***************

1740. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 2491812-2491853, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccttgcgtagccgagggc	Protospacer
**************************.***.***********

1741. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 2623675-2623716, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggctttgccctggatagccgagggc	Protospacer
**********************.****** ************

1742. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 2884865-2884906, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcacaggcgggcttcgccctggatagccgagggc	Protospacer
**********.****************** ************

1743. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 3484767-3484808, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctcgcccgcgcaggcgggcttcgccctggatagccgagggc	Protospacer
*** ************************* ************

1744. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 3484835-3484876, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggtttcgccctggatagccgagggc	Protospacer
*******************.********* ************

1745. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 3852354-3852395, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctcgcccgcgcaggcgggcttcgccctggatagccgagggc	Protospacer
*** ************************* ************

1746. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 4327516-4327557, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccctggctagccgagggc	Protospacer
*****************************  ***********

1747. spacer 79.1|4336423|42|NC_009523|CRISPRCasFinder matches to position: 5095970-5096011, mismatch: 2, identity: 0.952

tctagcccgcgcaggcgggcttcgccctgcatagccgagggc	CRISPR spacer
tctagcccgcgcaggcgggcttcgccctggatagccgggggc	Protospacer
***************************** *******.****

1748. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 336152-336193, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcattccatagccgagggctt	Protospacer
*********************** ** ***************

1749. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 375393-375434, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcattccatagccgagggctt	Protospacer
*********************** ** ***************

1750. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 3282598-3282639, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttggctagccgagggctt	Protospacer
***************************  *************

1751. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 3913822-3913863, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcattccatagccgagggctt	Protospacer
*********************** ** ***************

1752. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 4429380-4429421, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcattccatagccgagggctt	Protospacer
*********************** ** ***************

1753. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 4429616-4429657, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcattccatagccgagggctt	Protospacer
*********************** ** ***************

1754. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 5135496-5135537, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttgcctagccgagagctt	Protospacer
**************************** ********.****

1755. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 5321581-5321622, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttggctagccgagggctt	Protospacer
***************************  *************

1756. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 5616953-5616994, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcctcgcatagccgggggctt	Protospacer
*************************.*********.******

1757. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 580236-580277, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccctggatagccgagggctt	Protospacer
************************.** **************

1758. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 916962-917003, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttggctagccgagggctt	Protospacer
***************************  *************

1759. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 988127-988168, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttggctagccgagggctt	Protospacer
***************************  *************

1760. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 1977498-1977539, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcctcgcctagccgagggctt	Protospacer
*************************.** *************

1761. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 2202123-2202164, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcattccatagccgagggctt	Protospacer
*********************** ** ***************

1762. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 2497883-2497924, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttgtctagccgagggctt	Protospacer
***************************. *************

1763. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 2498265-2498306, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccctggatagccgagggctt	Protospacer
************************.** **************

1764. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 2543527-2543568, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccctggatagccgagggctt	Protospacer
************************.** **************

1765. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 4331639-4331680, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggctttgccttgcctagccgagggctt	Protospacer
********************.******* *************

1766. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 4336493-4336534, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgcattccatagccgagggctt	Protospacer
*********************** ** ***************

1767. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 4846785-4846826, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttggctagccgagggctt	Protospacer
***************************  *************

1768. spacer 81.1|4371360|42|NC_009523|CRISPRCasFinder matches to position: 5230715-5230756, mismatch: 2, identity: 0.952

cagcccgcgcaggcgggcttcgccttgcatagccgagggctt	CRISPR spacer
cagcccgcgcaggcgggcttcgccttggctagccgagggctt	Protospacer
***************************  *************

1769. spacer 83.1|4462882|34|NC_009523|CRISPRCasFinder matches to position: 186656-186689, mismatch: 2, identity: 0.941

atttcggtctaccctctgctggaaacgggcgcct	CRISPR spacer
atttcggtctacgctctgccggaaacgggcgcct	Protospacer
************ ******.**************

1770. spacer 83.1|4462882|34|NC_009523|CRISPRCasFinder matches to position: 3715747-3715780, mismatch: 2, identity: 0.941

atttcggtctaccctctgctggaaacgggcgcct	CRISPR spacer
atttcggtctacgctctgccggaaacgggcgcct	Protospacer
************ ******.**************

1771. spacer 83.1|4462882|34|NC_009523|CRISPRCasFinder matches to position: 4483815-4483848, mismatch: 2, identity: 0.941

atttcggtctaccctctgctggaaacgggcgcct	CRISPR spacer
atttcggtctacgctctgccggaaacgggcgcct	Protospacer
************ ******.**************

1772. spacer 83.1|4462882|34|NC_009523|CRISPRCasFinder matches to position: 2309986-2310019, mismatch: 2, identity: 0.941

atttcggtctaccctctgctggaaacgggcgcct	CRISPR spacer
atttcggtctacgctctgccggaaacgggcgcct	Protospacer
************ ******.**************

1773. spacer 83.1|4462882|34|NC_009523|CRISPRCasFinder matches to position: 4406610-4406643, mismatch: 2, identity: 0.941

atttcggtctaccctctgctggaaacgggcgcct	CRISPR spacer
atttcggtctacgctctgccggaaacgggcgcct	Protospacer
************ ******.**************

1774. spacer 83.1|4462882|34|NC_009523|CRISPRCasFinder matches to position: 4860920-4860953, mismatch: 2, identity: 0.941

atttcggtctaccctctgctggaaacgggcgcct	CRISPR spacer
atttcggtctacgctctgccggaaacgggcgcct	Protospacer
************ ******.**************

1775. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 814552-814591, mismatch: 2, identity: 0.95

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggctagccgagggcgtatggactttgaagaaataatccgg	Protospacer
************** ***** *******************

1776. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 2150387-2150426, mismatch: 2, identity: 0.95

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggctagccgagggcttatggtctttgaatacataatccgg	Protospacer
**************************** * *********

1777. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 5469767-5469806, mismatch: 2, identity: 0.95

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggttagccgagggctgatggtctttgaagaaataatccgg	Protospacer
**.************ ************************

1778. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 268552-268591, mismatch: 2, identity: 0.95

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggatagccgagggcgtatggtctttgaagaaataatccgg	Protospacer
** *********** *************************

1779. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 268620-268659, mismatch: 2, identity: 0.95

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggatagccgagggcgtatggtctttgaagaaataatccgg	Protospacer
** *********** *************************

1780. spacer 84.1|4536942|40|NC_009523|CRISPRCasFinder matches to position: 335885-335924, mismatch: 2, identity: 0.95

ggctagccgagggcttatggtctttgaagaaataatccgg	CRISPR spacer
ggatagccgagggcttatggtctttgaataaataatccgg	Protospacer
** ************************* ***********

1781. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 488066-488102, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgcataaataatcc	Protospacer
************************* * *********

1782. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 988086-988122, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgagtaaataatcc	Protospacer
**************************. *********

1783. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 1857584-1857620, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgggggcttatggtctttgaataaataatcc	Protospacer
********.****************** *********

1784. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 1877130-1877166, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgagtaaataatcc	Protospacer
**************************. *********

1785. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 2502067-2502103, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgggggcttatggtctttgaataaataatcc	Protospacer
********.****************** *********

1786. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 2884826-2884862, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
cattgccgagggctgatggtctttgaagaaataatcc	Protospacer
*** ********** **********************

1787. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 3282644-3282680, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgagtaaataatcc	Protospacer
**************************. *********

1788. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 3475713-3475749, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgagtaaataatcc	Protospacer
**************************. *********

1789. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 3639540-3639576, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcttatggtctttgagtaaataatcc	Protospacer
**************************. *********

1790. spacer 88.1|4772949|37|NC_009523|CRISPRCasFinder matches to position: 5585981-5586017, mismatch: 2, identity: 0.946

catagccgagggcttatggtctttgaagaaataatcc	CRISPR spacer
catagccgagggcgtatggtctttgaataaataatcc	Protospacer
************* ************* *********

1791. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 17562-17605, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctggagc	Protospacer
*********** ***************************.****

1792. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 17630-17673, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggcgagagc	Protospacer
*********** ************************** *****

1793. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 17821-17864, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggcgagagc	Protospacer
*********** ************************** *****

1794. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 630201-630244, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccaaggcgaagcccgcctgcgcgggctagagc	Protospacer
*********** ***.****************************

1795. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 748468-748511, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctggagc	Protospacer
*********** ***************************.****

1796. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 839786-839829, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctatagc	Protospacer
*********** **************************** ***

1797. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 1898749-1898792, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctggagc	Protospacer
*********** ***************************.****

1798. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 2622529-2622572, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatgcaaggcgaagcccgcctgcgcgggctagagc	Protospacer
************ **.****************************

1799. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 3004083-3004126, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccaaggcgaagcccgcctgcgcgggctagagc	Protospacer
*********** ***.****************************

1800. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 3645776-3645819, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctggagc	Protospacer
*********** ***************************.****

1801. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 5637421-5637464, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccagggcaaagcctgcctgcgcgggctagagc	Protospacer
*******************.*****.******************

1802. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 232663-232706, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctcgagc	Protospacer
*********** *************************** ****

1803. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 233155-233198, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctcgagc	Protospacer
*********** *************************** ****

1804. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 1132333-1132376, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatgcaaggcgaagcccgcctgcgcgggctagagc	Protospacer
************ **.****************************

1805. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 2543523-2543566, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccagggcgaagcccgcctgcgcgggctgtagc	Protospacer
***************************************. ***

1806. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 3064481-3064524, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccaaggcgaagcccgcctgcgcgggctggagc	Protospacer
***************.***********************.****

1807. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 3334436-3334479, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcaaagcccgcctgcgcgggctagagc	Protospacer
*********** *******.************************

1808. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 3397980-3398023, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctatccagggcgaaacccgcctgcgcgggcgagagc	Protospacer
**********************.*************** *****

1809. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 4699893-4699936, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctatagc	Protospacer
*********** **************************** ***

1810. spacer 92.1|5096038|44|NC_009523|CRISPRCasFinder matches to position: 4961805-4961848, mismatch: 2, identity: 0.955

gccctcggctatccagggcgaagcccgcctgcgcgggctagagc	CRISPR spacer
gccctcggctagccagggcgaagcccgcctgcgcgggctatagc	Protospacer
*********** **************************** ***

1811. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 149573-149605, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctacgcgggctata	Protospacer
******.**************.***********

1812. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 205555-205587, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1813. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 262397-262429, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1814. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 262465-262497, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taggcaaggcgaagcccgcctgcgcgggctata	Protospacer
*** **.**************************

1815. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 262533-262565, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagacaaggcgaagcccgcctgcgcgggctata	Protospacer
*** **.**************************

1816. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 268519-268551, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccaaggcgaagcccgcctgcgcgggctata	Protospacer
** ***.**************************

1817. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 268587-268619, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccaaggcgaagcccgcctgcgcgggctata	Protospacer
** ***.**************************

1818. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 315138-315170, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1819. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 335542-335574, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1820. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 335852-335884, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1821. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 811243-811275, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1822. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 916960-916992, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctgta	Protospacer
******.***********************.**

1823. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 988125-988157, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctgta	Protospacer
******.***********************.**

1824. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1257903-1257935, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccagggcaaagcccgcctgcgcgggctata	Protospacer
** *******.**********************

1825. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1574499-1574531, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1826. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1787737-1787769, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1827. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 1857549-1857581, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1828. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 2327070-2327102, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1829. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 2351797-2351829, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagtcaaggcgaagcccgcctgcgcgggctata	Protospacer
***.**.**************************

1830. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 2543525-2543557, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccagggcgaagcccgcctgcgcgggctgta	Protospacer
** ***************************.**

1831. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 2825415-2825447, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcaaagcccgcctgcgcgggctata	Protospacer
******.***.**********************

1832. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3148852-3148884, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcaaagcccgtctgcgcgggctata	Protospacer
**********.*******.**************

1833. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3282609-3282641, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctgta	Protospacer
******.***********************.**

1834. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3421777-3421809, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1835. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3484708-3484740, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tacccagggcaaagcccgcctgcgcgggctata	Protospacer
** *******.**********************

1836. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3652932-3652964, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1837. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3851141-3851173, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagtcaaggcgaagcccgcctgcgcgggctata	Protospacer
***.**.**************************

1838. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3851244-3851276, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1839. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 3927235-3927267, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1840. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4141376-4141408, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taggcaaggcgaagcccgcctgcgcgggctata	Protospacer
*** **.**************************

1841. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4182450-4182482, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1842. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4331705-4331737, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taggcaaggcgaagcccgcctgcgcgggctata	Protospacer
*** **.**************************

1843. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4366063-4366095, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccagggcaaagcccgcctgcgcgggctata	Protospacer
** *******.**********************

1844. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4429206-4429238, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1845. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4462965-4462997, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1846. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4543408-4543440, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1847. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4587775-4587807, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1848. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4684332-4684364, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tatccagggcaaagcccgcctgcgcgggctata	Protospacer
** *******.**********************

1849. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4699963-4699995, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcaaagcccgcctgcgcgggctata	Protospacer
******.***.**********************

1850. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4706687-4706719, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1851. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4846783-4846815, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctgta	Protospacer
******.***********************.**

1852. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 4978328-4978360, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1853. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5230713-5230745, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctgta	Protospacer
******.***********************.**

1854. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5321592-5321624, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccaaggcgaagcccgcctgcgcgggctgta	Protospacer
******.***********************.**

1855. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5469807-5469839, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1856. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5586020-5586052, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1857. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5586088-5586120, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1858. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5645089-5645121, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tagccagggcgaagcccgcctgcacgggctgta	Protospacer
***********************.******.**

1859. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to position: 5754458-5754490, mismatch: 2, identity: 0.939

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************

1860. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 487823-487843, mismatch: 2, identity: 0.905

aagggcgcataccggtttata	CRISPR spacer
aagggcgaatactggtttata	Protospacer
******* ****.********

1861. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 560904-560924, mismatch: 2, identity: 0.905

aagggcgcataccggtttata	CRISPR spacer
aagggcgaataccggattata	Protospacer
******* ******* *****

1862. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 1467422-1467442, mismatch: 2, identity: 0.905

aagggcgcataccggtttata	CRISPR spacer
aaaggcgcataccggattata	Protospacer
**.************ *****

1863. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 2884969-2884989, mismatch: 2, identity: 0.905

aagggcgcataccggtttata	CRISPR spacer
aacggcgaataccggtttata	Protospacer
** **** *************

1864. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 4429753-4429773, mismatch: 2, identity: 0.905

aagggcgcataccggtttata	CRISPR spacer
aagggcgaataccggattata	Protospacer
******* ******* *****

1865. spacer 98.1|5230818|21|NC_009523|CRT matches to position: 4573930-4573950, mismatch: 2, identity: 0.905

aagggcgcataccggtttata	CRISPR spacer
aatggcgaataccggtttata	Protospacer
** **** *************

1866. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 1724582-1724605, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaacgttgaaggttggaacg	Protospacer
********** *********.***

1867. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 1724604-1724627, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaacgttgaaggttggaacg	Protospacer
********** *********.***

1868. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 1724626-1724649, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaacgttgaaggttggaacg	Protospacer
********** *********.***

1869. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 1724715-1724738, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaacgttgaaggttggaacg	Protospacer
********** *********.***

1870. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 1724775-1724798, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaacgttgaaggttggaacg	Protospacer
********** *********.***

1871. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 1900698-1900721, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaaggttgaaggttgggacg	Protospacer
******* ** *************

1872. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 5550570-5550593, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaacgttgaaggttggaacg	Protospacer
********** *********.***

1873. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 5550622-5550645, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaacgttgaaggttggaacg	Protospacer
********** *********.***

1874. spacer 99.1|5244235|24|NC_009523|CRT matches to position: 5550711-5550734, mismatch: 2, identity: 0.917

cgttgaacgtggaaggttgggacg	CRISPR spacer
cgttgaacgttgaaggttggaacg	Protospacer
********** *********.***

1875. spacer 99.2|5244293|31|NC_009523|CRT matches to position: 4352086-4352116, mismatch: 2, identity: 0.935

ggtggaaggttgaaggttgcaggttgcaggt	CRISPR spacer
ggttgaaggttgaaggttgcacgttgcaggt	Protospacer
*** ***************** *********

1876. spacer 99.2|5244293|31|NC_009523|CRT matches to position: 5571166-5571196, mismatch: 2, identity: 0.935

ggtggaaggttgaaggttgcaggttgcaggt	CRISPR spacer
ggttgaaggttgaaggttgcaggttgcgggt	Protospacer
*** ***********************.***

1877. spacer 100.1|5261334|25|NC_009523|CRISPRCasFinder matches to position: 3654599-3654623, mismatch: 2, identity: 0.92

cacggcacgcggcgtatatcggatg	CRISPR spacer
cacggcacgcggcgcataccggatg	Protospacer
**************.***.******

1878. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 262458-262495, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttgcctagccgagg	Protospacer
***************************.******.***

1879. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 630203-630240, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1880. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 782281-782318, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1881. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1462358-1462395, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1882. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1462426-1462463, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1883. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1467508-1467545, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1884. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1634529-1634566, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1885. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 2351790-2351827, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttgactagccgagg	Protospacer
*************************** ******.***

1886. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 3004085-3004122, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1887. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 3386457-3386494, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1888. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 3639430-3639467, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1889. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 4141369-4141406, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttgcctagccgagg	Protospacer
***************************.******.***

1890. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 723911-723948, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1891. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1341226-1341263, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgcctcgtctagccgagg	Protospacer
*************************.********.***

1892. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1341284-1341321, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgcctcgtctagccgagg	Protospacer
*************************.********.***

1893. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1342151-1342188, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1894. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1342564-1342601, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1895. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1498729-1498766, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1896. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 1951134-1951171, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggtgggcttcgccttgtatagccaagg	Protospacer
*************.************** *********

1897. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 2403883-2403920, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1898. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 3654503-3654540, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1899. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 3851143-3851180, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttgactagccgagg	Protospacer
*************************** ******.***

1900. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 3868016-3868053, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttgactagccgagg	Protospacer
*************************** ******.***

1901. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 4331707-4331744, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttgcctagccgagg	Protospacer
***************************.******.***

1902. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 4699829-4699866, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttgcctggccaagg	Protospacer
***************************.**.*******

1903. spacer 104.1|5495174|38|NC_009523|CRISPRCasFinder matches to position: 4772990-4773027, mismatch: 2, identity: 0.947

tagcccgcgcaggcgggcttcgccttgtctagccaagg	CRISPR spacer
tagcccgcgcaggcgggcttcgccttggctagccgagg	Protospacer
*************************** ******.***

1904. spacer 28.5|1561974|19|NC_009523|CRISPRCasFinder matches to position: 1905046-1905064, mismatch: 5, identity: 0.737

caacgttcaaccttcaacg---	CRISPR spacer
---cgttgaacgttcaacgttg	Protospacer
   **** *** *******   

1905. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to position: 2536182-2536203, mismatch: 6, identity: 0.727

-gttcaaccttcaacgttcaacg	CRISPR spacer
cgttcaacgttgcaggttgaac-	Protospacer
 ******* **  * *** *** 

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_009523_28	28.3|1561879|22|NC_009523|CRISPRCasFinder	1561879-1561900	22	NC_014749	Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence	22592-22613	1	0.955
NC_009523_30	30.1|1564711|22|NC_009523|CRISPRCasFinder	1564711-1564732	22	NC_014749	Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence	22592-22613	2	0.909
NC_009523_30	30.2|1564760|22|NC_009523|CRISPRCasFinder	1564760-1564781	22	NC_014749	Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence	22592-22613	2	0.909
NC_009523_30	30.3|1564809|22|NC_009523|CRISPRCasFinder	1564809-1564830	22	NC_014749	Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence	22592-22613	2	0.909
NC_009523_18	18.1|1228981|25|NC_009523|CRISPRCasFinder	1228981-1229005	25	MG793454	Mycobacterium phage SWU2, complete genome	36724-36748	3	0.88
NC_009523_18	18.1|1228981|25|NC_009523|CRISPRCasFinder	1228981-1229005	25	NZ_CP041206	Rhizobium sp. NIBRBAC000502774 plasmid pMK-3, complete sequence	451850-451874	3	0.88
NC_009523_5	5.1|425037|26|NC_009523|CRISPRCasFinder	425037-425062	26	NZ_CP014792	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpB58, complete sequence	1924-1949	4	0.846
NC_009523_18	18.1|1228981|25|NC_009523|CRISPRCasFinder	1228981-1229005	25	MT553337	Mycobacterium phage DroogsArmy, complete genome	37233-37257	4	0.84
NC_009523_18	18.1|1228981|25|NC_009523|CRISPRCasFinder	1228981-1229005	25	JF957060	Mycobacterium phage Timshel, complete genome	37314-37338	4	0.84
NC_009523_25	25.1|1548266|25|NC_009523|CRISPRCasFinder	1548266-1548290	25	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	24475-24499	4	0.84
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1773195-1773223	4	0.862
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	40069-40097	4	0.862
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	35699-35724	4	0.846
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NC_009958	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI04, complete sequence	57133-57158	4	0.846
NC_009523_2	2.1|246655|27|NC_009523|CRISPRCasFinder	246655-246681	27	MK448914	Streptococcus phage Javan348, complete genome	27466-27492	5	0.815
NC_009523_3	3.2|328444|27|NC_009523|CRISPRCasFinder	328444-328470	27	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	193174-193200	5	0.815
NC_009523_18	18.1|1228981|25|NC_009523|CRISPRCasFinder	1228981-1229005	25	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	622210-622234	5	0.8
NC_009523_18	18.1|1228981|25|NC_009523|CRISPRCasFinder	1228981-1229005	25	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	322821-322845	5	0.8
NC_009523_18	18.1|1228981|25|NC_009523|CRISPRCasFinder	1228981-1229005	25	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	622210-622234	5	0.8
NC_009523_73	73.1|3969083|30|NC_009523|CRISPRCasFinder	3969083-3969112	30	NZ_CP017565	Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence	375486-375515	5	0.833
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	486522-486551	5	0.833
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	476089-476118	5	0.833
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	441429-441458	5	0.833
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	486560-486589	5	0.833
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	486559-486588	5	0.833
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	486551-486580	5	0.833
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	323997-324022	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	324068-324093	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	348902-348927	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	324006-324031	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	346550-346575	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1671669-1671694	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1671806-1671831	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1552156-1552181	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1671381-1671406	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1671327-1671352	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1663936-1663961	5	0.808
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1603232-1603257	5	0.808
NC_009523_99	99.2|5244293|31|NC_009523|CRT	5244293-5244323	31	MF495478	Aeromonas salmonicida plasmid pS121-1b, complete sequence	150122-150152	5	0.839
NC_009523_99	99.2|5244293|31|NC_009523|CRT	5244293-5244323	31	NZ_CP038450	Aeromonas media strain R50-22 plasmid pAeme6, complete sequence	179385-179415	5	0.839
NC_009523_99	99.2|5244293|31|NC_009523|CRT	5244293-5244323	31	NZ_CP022170	Aeromonas salmonicida strain S121 plasmid pS121-1a, complete sequence	157766-157796	5	0.839
NC_009523_103	103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436502-5436534	33	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	235846-235878	5	0.848
NC_009523_103	103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437576-5437608	33	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	235846-235878	5	0.848
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NZ_AP019636	Enterobacter sp. 18A13 plasmid pECC18A13-2, complete sequence	8828-8859	6	0.812
NC_009523_25	25.1|1548266|25|NC_009523|CRISPRCasFinder	1548266-1548290	25	NZ_CP022425	Vitreoscilla filiformis strain ATCC 15551 plasmid pVF2, complete sequence	4159-4183	6	0.76
NC_009523_58	58.32|3152243|37|NC_009523|CRISPRCasFinder	3152243-3152279	37	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	601549-601585	6	0.838
NC_009523_58	58.43|3153062|36|NC_009523|CRISPRCasFinder	3153062-3153097	36	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	2020253-2020288	6	0.833
NC_009523_58	58.43|3153062|36|NC_009523|CRISPRCasFinder	3153062-3153097	36	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	952303-952338	6	0.833
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP013524	Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence	274354-274390	6	0.838
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	247306-247334	6	0.793
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	357906-357934	6	0.793
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	41199-41227	6	0.793
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	234751-234779	6	0.793
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	655741-655771	6	0.806
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1164229-1164259	6	0.806
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	533117-533146	6	0.8
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	75334-75363	6	0.8
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP041249	Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence	47216-47245	6	0.8
NC_009523_80	80.1|4347600|26|NC_009523|CRISPRCasFinder	4347600-4347625	26	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	406880-406905	6	0.769
NC_009523_103	103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435427-5435459	33	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence	830670-830702	6	0.818
NC_009523_103	103.61|5438316|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438316-5438349	34	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	709154-709187	6	0.824
NC_009523_103	103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438923-5438955	33	MN813693	Mycobacterium phage Imvubu, complete genome	56678-56710	6	0.818
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	132651-132685	6	0.829
NC_009523_103	103.107|5441353|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR	5441353-5441385	33	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	831720-831752	6	0.818
NC_009523_8	8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797526-797557	32	NC_029046	Sinorhizobium phage phiLM21, complete genome	16767-16798	7	0.781
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NC_002112	Streptomyces cyaneus plasmid pSA1.1, complete sequence	575-606	7	0.781
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	188673-188704	7	0.781
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1202821-1202852	7	0.781
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NZ_LN997849	Magnetospirillum sp. XM-1 isolate XM1 plasmid II, complete sequence	6625-6656	7	0.781
NC_009523_23	23.1|1492791|28|NC_009523|CRISPRCasFinder	1492791-1492818	28	NZ_CP025552	Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence	158101-158128	7	0.75
NC_009523_39	39.1|2110434|33|NC_009523|CRISPRCasFinder	2110434-2110466	33	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	1428464-1428496	7	0.788
NC_009523_43	43.10|2317414|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2317414-2317451	38	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1444865-1444902	7	0.816
NC_009523_43	43.10|2317414|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2317414-2317451	38	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	267712-267749	7	0.816
NC_009523_43	43.10|2317414|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2317414-2317451	38	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	951186-951223	7	0.816
NC_009523_43	43.29|2318801|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2318801-2318835	35	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	359790-359824	7	0.8
NC_009523_43	43.31|2318945|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2318945-2318981	37	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	680864-680900	7	0.811
NC_009523_43	43.41|2319679|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2319679-2319716	38	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	51731-51768	7	0.816
NC_009523_46	46.1|2382967|31|NC_009523|CRISPRCasFinder	2382967-2382997	31	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	100744-100774	7	0.774
NC_009523_49	49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2434879-2434915	37	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1325450-1325486	7	0.811
NC_009523_58	58.46|3153283|36|NC_009523|CRISPRCasFinder	3153283-3153318	36	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	729039-729074	7	0.806
NC_009523_58	58.83|3156038|38|NC_009523|CRISPRCasFinder	3156038-3156075	38	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	333011-333048	7	0.816
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1269764-1269800	7	0.811
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK962627	Achromobacter phage vB_AxyS_19-32_Axy06, complete genome	2443-2479	7	0.811
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656161-656197	7	0.811
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	541828-541864	7	0.811
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MN369753	Gordonia phage Sukkupi, complete genome	35214-35250	7	0.811
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK376960	Gordonia phage BiPauneto, complete genome	35323-35359	7	0.811
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MN369766	Gordonia phage Yndexa, complete genome	35214-35250	7	0.811
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	449027-449066	7	0.825
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1269761-1269800	7	0.825
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	88470-88498	7	0.759
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	426469-426497	7	0.759
NC_009523_70	70.3|3782083|35|NC_009523|CRT,CRISPRCasFinder	3782083-3782117	35	KT381865	Pelagibaca phage vB_PeaS-P1, partial genome	15701-15735	7	0.8
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP040824	Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence	25598-25629	7	0.781
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1108561-1108591	7	0.774
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	MH617445	Inoviridae sp. isolate ctcf2, complete genome	4207-4237	7	0.774
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NC_015170	Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence	96885-96914	7	0.767
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP053952	Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence	458317-458346	7	0.767
NC_009523_78	78.8|4198886|30|NC_009523|CRT	4198886-4198915	30	NZ_CP053949	Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence	108375-108404	7	0.767
NC_009523_86	86.1|4629137|33|NC_009523|CRISPRCasFinder	4629137-4629169	33	NZ_CP021408	Celeribacter manganoxidans strain DY25 plasmid pDY25-D, complete sequence	22937-22969	7	0.788
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	1370108-1370140	7	0.788
NC_009523_103	103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435427-5435459	33	NZ_CP027296	Streptomyces sp. SGAir0924 plasmid unnamed_1, complete sequence	19981-20013	7	0.788
NC_009523_103	103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435427-5435459	33	NZ_CP027298	Streptomyces sp. SGAir0924 plasmid unnamed_4, complete sequence	9299-9331	7	0.788
NC_009523_103	103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435427-5435459	33	NZ_CP027299	Streptomyces sp. SGAir0924 plasmid unnamed_5	12335-12367	7	0.788
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP022197	Celeribacter ethanolicus strain TSPH2 plasmid unnamed, complete sequence	87509-87541	7	0.788
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP021117	Rhodobacteraceae bacterium strain G7 plasmid unnamed3, complete sequence	8085-8117	7	0.788
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP004396	Celeribacter indicus strain P73 plasmid pP73C, complete sequence	66143-66175	7	0.788
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	163190-163222	7	0.788
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NC_020061	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence	163223-163255	7	0.788
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP024313	Rhizobium sp. NXC24 plasmid pRspNXC24b, complete sequence	103070-103102	7	0.788
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP032692	Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence	421895-421927	7	0.788
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	AP021852	Deinococcus grandis ATCC 43672 plasmid: pDEGR-3 DNA, complete genome	3608-3640	7	0.788
NC_009523_103	103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438653-5438687	35	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	63813-63847	7	0.8
NC_009523_103	103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438788-5438821	34	NC_006363	Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence	38498-38531	7	0.794
NC_009523_103	103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438923-5438955	33	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	35326-35358	7	0.788
NC_009523_103	103.71|5438989|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438989-5439023	35	NZ_CP025505	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence	9702-9736	7	0.8
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NC_006912	Streptomyces sp. FQ1 plasmid pFP1, complete sequence	7742-7775	7	0.794
NC_009523_103	103.107|5441353|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR	5441353-5441385	33	NZ_CP013105	Paraburkholderia caribensis strain MWAP64 plasmid 2, complete sequence	137693-137725	7	0.788
NC_009523_3	3.1|328389|31|NC_009523|CRISPRCasFinder	328389-328419	31	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	361264-361294	8	0.742
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP017756	Cupriavidus malaysiensis strain USMAA1020 isolate pure plasmid unnamed1, complete sequence	113970-114001	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	99046-99077	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_KX912253	Enterobacter asburiae strain H162620587 plasmid pJF-587, complete sequence	4364-4395	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP017473	Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence	17765-17796	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP017473	Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence	45050-45081	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP017473	Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence	138392-138423	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP017473	Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence	152936-152967	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP034768	Enterobacter sp. N18-03635 plasmid pFRI-6, complete sequence	100690-100721	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	540045-540076	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	520152-520183	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP049248	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed2, complete sequence	17538-17569	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_AP019633	Enterobacter asburiae strain 1808-013 plasmid pEAS1808-013-1, complete sequence	126027-126058	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_AP019631	Enterobacter asburiae strain 17Nkhm-UP2 plasmid pEAS17Nkhm-UP2-1, complete sequence	95054-95085	8	0.75
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	8946-8977	8	0.75
NC_009523_8	8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797526-797557	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	731212-731243	8	0.75
NC_009523_8	8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797526-797557	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1412771-1412802	8	0.75
NC_009523_8	8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797526-797557	32	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	277774-277805	8	0.75
NC_009523_8	8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797526-797557	32	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	429633-429664	8	0.75
NC_009523_8	8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797526-797557	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	112205-112236	8	0.75
NC_009523_8	8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797526-797557	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	616377-616408	8	0.75
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NC_009794	Citrobacter koseri ATCC BAA-895 plasmid pCKO2, complete sequence	5312-5343	8	0.75
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NZ_CP011586	Enterobacter asburiae strain CAV1043 plasmid pCAV1043-10, complete sequence	1076-1107	8	0.75
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NC_015175	Enterobacter cloacae plasmid pS51A, complete sequence	4794-4825	8	0.75
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NZ_LR792631	Klebsiella pneumoniae isolate SB5881 plasmid SB5881_III	2098-2129	8	0.75
NC_009523_24	24.1|1517465|31|NC_009523|CRISPRCasFinder	1517465-1517495	31	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	205890-205920	8	0.742
NC_009523_24	24.1|1517465|31|NC_009523|CRISPRCasFinder	1517465-1517495	31	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	205043-205073	8	0.742
NC_009523_24	24.1|1517465|31|NC_009523|CRISPRCasFinder	1517465-1517495	31	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	205059-205089	8	0.742
NC_009523_24	24.1|1517465|31|NC_009523|CRISPRCasFinder	1517465-1517495	31	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	205056-205086	8	0.742
NC_009523_24	24.1|1517465|31|NC_009523|CRISPRCasFinder	1517465-1517495	31	NZ_CP030220	Salmonella enterica strain SA20021456 plasmid pSA20021456.1, complete sequence	57770-57800	8	0.742
NC_009523_24	24.1|1517465|31|NC_009523|CRISPRCasFinder	1517465-1517495	31	NZ_CP018634	Salmonella enterica subsp. enterica serovar Enteritidis strain 49-2444 plasmid pSE49-2444, complete sequence	81216-81246	8	0.742
NC_009523_43	43.32|2319019|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2319019-2319054	36	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	576606-576641	8	0.778
NC_009523_44	44.6|2322126|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2322126-2322161	36	NZ_CP021373	Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence	42358-42393	8	0.778
NC_009523_46	46.1|2382967|31|NC_009523|CRISPRCasFinder	2382967-2382997	31	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	67251-67281	8	0.742
NC_009523_49	49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2434879-2434915	37	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	778518-778554	8	0.784
NC_009523_58	58.20|3153060|38|NC_009523|PILER-CR	3153060-3153097	38	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	2020251-2020288	8	0.789
NC_009523_58	58.20|3153060|38|NC_009523|PILER-CR	3153060-3153097	38	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	952301-952338	8	0.789
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1561754-1561788	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	251504-251538	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KX388535	Agrobacterium tumefaciens strain EU6 plasmid pTiEU6, complete sequence	47316-47350	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000059	Agrobacterium tumefaciens strain CFBP1898 plasmid pTi_CFBP1898, complete sequence	46901-46935	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_CP042277	Agrobacterium tumefaciens strain 186 plasmid pTi, complete sequence	171220-171254	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_CP039927	Agrobacterium tumefaciens strain CFBP7129 plasmid pTiCFBP7129, complete sequence	183598-183632	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_CP032925	Agrobacterium tumefaciens strain 1D1108 plasmid pTi1D1108, complete sequence	169856-169890	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_CP033026	Agrobacterium fabrum strain 1D132 plasmid pTi1D132, complete sequence	170860-170894	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000064	Agrobacterium tumefaciens strain CFBP7126 plasmid pTi_CFBP7126, complete sequence	178062-178096	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000069	Agrobacterium deltaense strain Tun176 plasmid pTi_Tun176, complete sequence	20372-20406	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000058	Agrobacterium rhizogenes strain CFBP1317 plasmid pTi_CFBP1317, complete sequence	47121-47155	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000070	Agrobacterium tumefaciens strain Tun178 plasmid pTi_Tun178, complete sequence	147754-147788	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000065	Agrobacterium tumefaciens strain CFBP7128 plasmid pTi_CFBP7128, complete sequence	2036-2070	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000066	Agrobacterium deltaense strain CFBP7129 plasmid pTi_CFBP7129, complete sequence	192237-192271	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000062	Agrobacterium genomosp. 3 strain CFBP4424 plasmid pTi_CFBP4424, complete sequence	44463-44497	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000073	Agrobacterium tumefaciens strain Tun188 plasmid pTi_Tun188, complete sequence	44186-44220	8	0.771
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000071	Agrobacterium tumefaciens strain Tun183 plasmid pTi_Tun183, complete sequence	151298-151332	8	0.771
NC_009523_58	58.46|3153283|36|NC_009523|CRISPRCasFinder	3153283-3153318	36	NC_015180	Acidiphilium multivorum AIU301 plasmid pACMV5, complete sequence	11542-11577	8	0.778
NC_009523_58	58.58|3154179|35|NC_009523|CRISPRCasFinder	3154179-3154213	35	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	281256-281290	8	0.771
NC_009523_58	58.58|3154179|35|NC_009523|CRISPRCasFinder	3154179-3154213	35	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	264312-264346	8	0.771
NC_009523_58	58.58|3154179|35|NC_009523|CRISPRCasFinder	3154179-3154213	35	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	99178-99212	8	0.771
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	615908-615943	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	633058-633093	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	745603-745638	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	881639-881674	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	630617-630652	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	637232-637267	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	634947-634982	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	698965-699000	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	724488-724523	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	745632-745667	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	698965-699000	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	724488-724523	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	698965-699000	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	698969-699004	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	724488-724523	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	724488-724523	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	724488-724523	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	698965-699000	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	724490-724525	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	2000292-2000327	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1191414-1191449	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1633902-1633937	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	432481-432516	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1352219-1352254	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1459446-1459481	8	0.778
NC_009523_58	58.91|3156636|36|NC_009523|CRISPRCasFinder	3156636-3156671	36	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	808817-808852	8	0.778
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	604433-604469	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MF919511	Mycobacterium phage Kailash, complete genome	20784-20820	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH727555	Mycobacterium phage Mulan, complete genome	20453-20489	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MT776813	Mycobacterium phage Magic8, complete genome	20772-20808	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MG757164	Mycobacterium phage PhenghisKhan, complete genome	20334-20370	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MT241607	Achromobacter phage AMA2, complete genome	30650-30686	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MG757165	Mycobacterium phage Phergie, complete genome	20328-20364	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH371114	Mycobacterium phage Childish, complete genome	20459-20495	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK279864	Mycobacterium phage Mag7, complete genome	20334-20370	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH155874	Mycobacterium phage PhrankReynolds, complete genome	20334-20370	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH576958	Mycobacterium phage MichaelPhcott, complete genome	20334-20370	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK112553	Mycobacterium Phage Squiggle, complete genome	20452-20488	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH316568	Mycobacterium phage Phleuron, complete genome	20334-20370	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KP202970	Achromobacter phage 83-24, complete genome	884-920	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KP202970	Achromobacter phage 83-24, complete genome	887-923	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KP202970	Achromobacter phage 83-24, complete genome	46457-46493	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KP202970	Achromobacter phage 83-24, complete genome	46460-46496	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KP202970	Achromobacter phage 83-24, complete genome	890-926	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KP202970	Achromobacter phage 83-24, complete genome	46463-46499	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MG962363	Mycobacterium phage BatteryCK, complete genome	20328-20364	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	813365-813401	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	24788-24824	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	190076-190112	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	190040-190076	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP046349	Citrobacter portucalensis strain FDAARGOS_738 plasmid unnamed2, complete sequence	29371-29407	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	24788-24824	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MN234185	Mycobacterium phage Lemuria, complete genome	23789-23825	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	774016-774052	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KY385384	Mycobacterium phage SimranZ1, complete genome	12160-12196	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP015269	Mycobacterium chimaera strain ZUERICH-2 plasmid unnamed 2, complete sequence	4735-4771	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	669511-669547	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	435167-435203	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	435170-435206	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	435170-435206	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	435170-435206	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	435170-435206	8	0.784
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	435170-435206	8	0.784
NC_009523_62	62.1|3475680|29|NC_009523|CRISPRCasFinder	3475680-3475708	29	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	492980-493008	8	0.724
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	1005180-1005216	8	0.784
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	772038-772074	8	0.784
NC_009523_70	70.41|3784905|36|NC_009523|CRT,CRISPRCasFinder	3784905-3784940	36	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	518854-518889	8	0.778
NC_009523_71	71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT	3854389-3854420	32	NZ_CP018236	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed8	9505-9536	8	0.75
NC_009523_71	71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT	3854389-3854420	32	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	113518-113549	8	0.75
NC_009523_71	71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT	3854389-3854420	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2184789-2184820	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	174022-174053	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	159316-159347	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	157882-157913	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	174026-174057	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1828381-1828412	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1845070-1845101	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	157882-157913	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	173933-173964	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	173931-173962	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	191246-191277	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1514-1545	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1807055-1807086	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1513-1544	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	401193-401224	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	23405-23436	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP032697	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence	252102-252133	8	0.75
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	2220113-2220144	8	0.75
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	MH399787	Mycobacterium phage Rubeelu, complete genome	16995-17025	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NC_021061	Mycobacterium phage Butters, complete genome	16995-17025	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	397236-397266	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1755313-1755343	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	HM152765	Mycobacterium phage Island3, complete genome	37036-37066	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	KP027201	Mycobacterium phage Sbash, complete genome	42988-43018	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NC_004683	Mycobacterium phage Che9c, complete genome	45578-45608	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NC_011291	Mycobacterium phage Brujita, complete genome	37036-37066	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	AY129333	Mycobacterium virus Che9c, complete genome	45578-45608	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	102166-102196	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	141487-141517	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP039426	Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence	9435-9465	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	316511-316541	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP039431	Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence	9435-9465	8	0.742
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	MN234219	Mycobacterium phage Mercurio, complete genome	42203-42233	8	0.742
NC_009523_78	78.6|4198784|30|NC_009523|CRT	4198784-4198813	30	MN131137	Aeromonas phage D6, complete genome	166206-166235	8	0.733
NC_009523_78	78.6|4198784|30|NC_009523|CRT	4198784-4198813	30	MK838116	Aeromonas phage LAh10, complete genome	112486-112515	8	0.733
NC_009523_78	78.6|4198784|30|NC_009523|CRT	4198784-4198813	30	MN102098	Aeromonas phage D3, complete genome	167271-167300	8	0.733
NC_009523_103	103.4|5434485|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5434485-5434519	35	NZ_CP016620	Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence	131679-131713	8	0.771
NC_009523_103	103.14|5435162|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435162-5435195	34	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	738623-738656	8	0.765
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	354597-354627	8	0.742
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	354570-354600	8	0.742
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	368991-369021	8	0.742
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	354570-354600	8	0.742
NC_009523_103	103.17|5435360|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435360-5435393	34	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	417240-417273	8	0.765
NC_009523_103	103.17|5435360|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435360-5435393	34	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	339293-339326	8	0.765
NC_009523_103	103.23|5435760|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435760-5435793	34	MN119376	Streptomyces phage Geostin, complete genome	25414-25447	8	0.765
NC_009523_103	103.23|5435760|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435760-5435793	34	MH155868	Streptomyces phage FlowerPower, complete genome	25414-25447	8	0.765
NC_009523_103	103.23|5435760|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435760-5435793	34	MN284894	Streptomyces phage Fabian, complete genome	25414-25447	8	0.765
NC_009523_103	103.32|5436369|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436369-5436402	34	NZ_CP031159	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence	44401-44434	8	0.765
NC_009523_103	103.39|5436839|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436839-5436872	34	NZ_CP029987	Sphingomonas sp. FARSPH plasmid p02, complete sequence	7603-7636	8	0.765
NC_009523_103	103.41|5436974|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436974-5437006	33	NZ_CP027239	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence	135872-135904	8	0.758
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP046256	Sphingobium sp. CAP-1 plasmid p3, complete sequence	1398-1430	8	0.758
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP046256	Sphingobium sp. CAP-1 plasmid p3, complete sequence	219466-219498	8	0.758
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP022748	Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence	10674-10706	8	0.758
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP022748	Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence	4754-4786	8	0.758
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP016454	Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence	22481-22513	8	0.758
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP016454	Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence	16561-16593	8	0.758
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	489933-489965	8	0.758
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	156407-156439	8	0.758
NC_009523_103	103.61|5438316|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438316-5438349	34	NC_011604	Salmonella enterica subsp. enterica serovar Westhampton plasmid pWES-1, complete sequence	10056-10089	8	0.765
NC_009523_103	103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438653-5438687	35	CP052389	Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1	80618-80652	8	0.771
NC_009523_103	103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438653-5438687	35	MH719195	Pseudomonas phage Ps59, complete genome	38548-38582	8	0.771
NC_009523_103	103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438653-5438687	35	JX495043	Pseudomonas phage JBD67, partial genome	37753-37787	8	0.771
NC_009523_103	103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438653-5438687	35	MH719190	Pseudomonas phage H71, complete genome	37751-37785	8	0.771
NC_009523_103	103.71|5438989|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438989-5439023	35	NC_021910	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetNIM1c, complete sequence	7113-7147	8	0.771
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2641307-2641340	8	0.765
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NZ_CP044079	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence	230271-230304	8	0.765
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NZ_CP031079	Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence	471125-471158	8	0.765
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NZ_CP020443	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence	82481-82514	8	0.765
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NC_016972	Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2, complete sequence	3422-3455	8	0.765
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1327820-1327854	8	0.771
NC_009523_103	103.99|5440816|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR	5440816-5440849	34	NZ_CP010858	Marinovum algicola DG 898 plasmid pMaD3	87296-87329	8	0.765
NC_009523_3	3.1|328389|31|NC_009523|CRISPRCasFinder	328389-328419	31	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	504955-504985	9	0.71
NC_009523_8	8.2|797038|32|NC_009523|CRISPRCasFinder,CRT	797038-797069	32	NZ_CP049605	Klebsiella pneumoniae strain Kp8701 plasmid unnamed, complete sequence	121226-121257	9	0.719
NC_009523_8	8.2|797038|32|NC_009523|CRISPRCasFinder,CRT	797038-797069	32	NZ_CP025212	Klebsiella pneumoniae strain HZW25 plasmid unnamed1, complete sequence	47272-47303	9	0.719
NC_009523_8	8.2|797038|32|NC_009523|CRISPRCasFinder,CRT	797038-797069	32	NZ_CP031809	Klebsiella pneumoniae strain INF206-sc-2280074 plasmid unnamed, complete sequence	72284-72315	9	0.719
NC_009523_8	8.2|797038|32|NC_009523|CRISPRCasFinder,CRT	797038-797069	32	NZ_CP041936	Klebsiella pneumoniae strain KP14003 plasmid unnamed2, complete sequence	54704-54735	9	0.719
NC_009523_8	8.2|797038|32|NC_009523|CRISPRCasFinder,CRT	797038-797069	32	NC_019390	Klebsiella pneumoniae plasmid pKPN_CZ, complete sequence	51668-51699	9	0.719
NC_009523_8	8.2|797038|32|NC_009523|CRISPRCasFinder,CRT	797038-797069	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	915777-915808	9	0.719
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	LR606149	Rhizobium sp. Q54 genome assembly, plasmid: 6	129787-129818	9	0.719
NC_009523_8	8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797587-797618	32	NZ_CP050089	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence	125417-125448	9	0.719
NC_009523_8	8.18|798013|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	798013-798044	32	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	190314-190345	9	0.719
NC_009523_36	36.1|1891995|35|NC_009523|CRISPRCasFinder	1891995-1892029	35	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	532807-532841	9	0.743
NC_009523_43	43.24|2318434|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2318434-2318470	37	NZ_CP015237	Rhodococcus fascians D188 plasmid unnamed2, complete sequence	138140-138176	9	0.757
NC_009523_43	43.30|2318873|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2318873-2318907	35	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	173300-173334	9	0.743
NC_009523_44	44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2322418-2322454	37	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	676695-676731	9	0.757
NC_009523_44	44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2322418-2322454	37	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1265718-1265754	9	0.757
NC_009523_44	44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2322418-2322454	37	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1434034-1434070	9	0.757
NC_009523_44	44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2322418-2322454	37	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1782981-1783017	9	0.757
NC_009523_44	44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2322418-2322454	37	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	698345-698381	9	0.757
NC_009523_44	44.12|2322564|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2322564-2322598	35	NC_049851	Burkholderia phage BcepSauron, complete genome	215601-215635	9	0.743
NC_009523_44	44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2323810-2323845	36	NZ_CP016292	Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence	266882-266917	9	0.75
NC_009523_44	44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2323810-2323845	36	NZ_CP016292	Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence	276619-276654	9	0.75
NC_009523_44	44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2323810-2323845	36	NZ_CP016292	Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence	299355-299390	9	0.75
NC_009523_44	44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2323810-2323845	36	NZ_CP016292	Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence	305804-305839	9	0.75
NC_009523_44	44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2323810-2323845	36	NZ_CP018234	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed6, complete sequence	222466-222501	9	0.75
NC_009523_44	44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2323810-2323845	36	NZ_CP018234	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed6, complete sequence	232189-232224	9	0.75
NC_009523_46	46.1|2382967|31|NC_009523|CRISPRCasFinder	2382967-2382997	31	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	1739791-1739821	9	0.71
NC_009523_49	49.24|2429129|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2429129-2429164	36	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	375653-375688	9	0.75
NC_009523_49	49.29|2429496|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2429496-2429530	35	NZ_CP048642	Streptomyces aureoverticillatus strain HN6 plasmid unnamed, complete sequence	84414-84448	9	0.743
NC_009523_49	49.29|2429496|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2429496-2429530	35	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1333439-1333473	9	0.743
NC_009523_49	49.80|2433257|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2433257-2433292	36	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	262412-262447	9	0.75
NC_009523_49	49.103|2434953|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2434953-2434987	35	NC_030916	Tsukamurella phage TPA4, complete genome	3392-3426	9	0.743
NC_009523_49	49.121|2436289|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2436289-2436324	36	NZ_CP011590	Enterobacter asburiae strain CAV1043 plasmid pCAV1043-97, complete sequence	347-382	9	0.75
NC_009523_57	57.1|3143490|32|NC_009523|CRISPRCasFinder	3143490-3143521	32	NC_048743	Mycobacterium phage DrLupo, complete genome	12869-12900	9	0.719
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NC_011982	Agrobacterium vitis S4 plasmid pTiS4, complete sequence	252509-252543	9	0.743
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000032	Agrobacterium fabrum strain CFBP2788 plasmid pTi_CFBP2788, complete sequence	59183-59217	9	0.743
NC_009523_58	58.26|3151800|35|NC_009523|CRISPRCasFinder	3151800-3151834	35	NZ_KY000032	Agrobacterium fabrum strain CFBP2788 plasmid pTi_CFBP2788, complete sequence	60852-60886	9	0.743
NC_009523_58	58.30|3152095|39|NC_009523|CRISPRCasFinder	3152095-3152133	39	NC_021289	Burkholderia insecticola plasmid p1, complete sequence	13422-13460	9	0.769
NC_009523_58	58.86|3156267|35|NC_009523|CRISPRCasFinder	3156267-3156301	35	KU726251	Enterobacteria phage SEGD1, complete genome	130851-130885	9	0.743
NC_009523_58	58.86|3156267|35|NC_009523|CRISPRCasFinder	3156267-3156301	35	MT679221	Proteus phage 7, complete genome	132958-132992	9	0.743
NC_009523_58	58.86|3156267|35|NC_009523|CRISPRCasFinder	3156267-3156301	35	NC_027402	Salmonella phage SPN3US, complete genome	132093-132127	9	0.743
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1219078-1219114	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651326-651362	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085425-1085461	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	304557-304593	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	304560-304596	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	449027-449063	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	449024-449060	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	604436-604472	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054251-1054287	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636320-636356	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151647-1151683	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233367-233403	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644385-644421	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634194-634230	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302122-1302158	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895618-895654	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	773045-773081	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558371-558407	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292502-292538	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1422985-1423021	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373417-373453	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	794926-794962	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	657999-658035	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1226004-1226040	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998687-998723	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085430-1085466	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	810323-810359	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	813368-813404	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	27830-27866	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	24785-24821	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	27830-27866	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	190037-190073	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	190028-190064	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	305655-305691	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	27830-27866	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	24785-24821	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	22914-22950	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH746817	Achromobacter phage vB_Ade_ART, complete genome	33207-33243	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MT241605	Achromobacter phage AMA1, complete genome	45329-45365	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MT241605	Achromobacter phage AMA1, complete genome	45320-45356	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH479916	Mycobacterium phage GeneCoco, complete genome	61852-61888	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH697582	Mycobacterium phage Ejimix, complete genome	32313-32349	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK967402	Mycobacterium phage NihilNomen, complete genome	31604-31640	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KM363596	Mycobacteriophage Omnicron, complete genome	23384-23420	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK524521	Mycobacterium phage Schatzie, complete genome	30585-30621	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MN183286	Mycobacteriophage Yeet, complete genome	30830-30866	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK327944	Escherichia phage vB_EcoM_G2540-3, complete genome	158643-158679	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK524504	Mycobacterium phage Hughesyang, complete genome	31456-31492	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_031109	Gordonia phage Jumbo, complete genome	20053-20089	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH727546	Mycobacterium phage Eaglehorse, complete genome	22269-22305	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_019959	Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence	105966-106002	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2188939-2188975	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MT740744	Ralstonia phage Jenny, complete genome	22967-23003	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK279858	Mycobacterium phage JakeO, complete genome	61406-61442	9	0.757
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_028681	Mycobacterium phage Pops, complete genome	20748-20784	9	0.757
NC_009523_58	58.105|3157675|37|NC_009523|CRISPRCasFinder	3157675-3157711	37	NZ_CP012186	Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence	176955-176991	9	0.757
NC_009523_58	58.105|3157675|37|NC_009523|CRISPRCasFinder	3157675-3157711	37	NZ_CP010991	Pseudonocardia sp. EC080625-04 plasmid pFRP1-2, complete sequence	29351-29387	9	0.757
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MH727555	Mycobacterium phage Mulan, complete genome	20453-20492	9	0.775
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MH371114	Mycobacterium phage Childish, complete genome	20459-20498	9	0.775
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MK112553	Mycobacterium Phage Squiggle, complete genome	20452-20491	9	0.775
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	813362-813401	9	0.775
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	24788-24827	9	0.775
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656161-656200	9	0.775
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	24788-24827	9	0.775
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MN234185	Mycobacterium phage Lemuria, complete genome	23789-23828	9	0.775
NC_009523_70	70.3|3782083|35|NC_009523|CRT,CRISPRCasFinder	3782083-3782117	35	NC_031059	Rhodovulum phage vB_RhkS_P1, complete genome	22319-22353	9	0.743
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1059031-1059067	9	0.757
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	660761-660797	9	0.757
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	318017-318053	9	0.757
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	357706-357742	9	0.757
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	156600-156636	9	0.757
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	162447-162483	9	0.757
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	293977-294013	9	0.757
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	1114030-1114066	9	0.757
NC_009523_70	70.33|3784306|38|NC_009523|CRT,CRISPRCasFinder	3784306-3784343	38	NZ_CP010865	Marinovum algicola DG 898 plasmid pMaD10, complete sequence	9788-9825	9	0.763
NC_009523_70	70.50|3785572|38|NC_009523|CRT,CRISPRCasFinder	3785572-3785609	38	NZ_CP010865	Marinovum algicola DG 898 plasmid pMaD10, complete sequence	9788-9825	9	0.763
NC_009523_71	71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT	3854389-3854420	32	NZ_CP042262	Litoreibacter sp. LN3S51 plasmid unnamed1, complete sequence	283314-283345	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1740045-1740076	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1827215-1827246	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1662068-1662099	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1732298-1732329	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1661090-1661121	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1740114-1740145	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1740115-1740146	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1662061-1662092	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1661382-1661413	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1662050-1662081	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1740214-1740245	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1740212-1740243	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1740191-1740222	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NC_015383	Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence	290126-290157	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_LR594664	Variovorax sp. RA8 plasmid 3	200911-200942	9	0.719
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	JN880423	Salisaeta icosahedral phage 1, complete genome	12371-12402	9	0.719
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2409986-2410016	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	80261-80291	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	KF986246	Mycobacterium phage MichelleMyBell, complete genome	17026-17056	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	MK524500	Mycobacterium phage Kevin1, complete genome	16996-17026	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2264207-2264237	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	802108-802138	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	209028-209058	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	1020134-1020164	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NC_007765	Rhizobium etli CFN 42 plasmid p42e, complete sequence	277455-277485	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	287225-287255	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP020909	Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence	277892-277922	9	0.71
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NC_021908	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence	283893-283923	9	0.71
NC_009523_75	75.1|4102897|33|NC_009523|CRISPRCasFinder	4102897-4102929	33	NZ_CP031959	Phaeobacter sp. LSS9 plasmid unnamed3, complete sequence	30780-30812	9	0.727
NC_009523_75	75.1|4102897|33|NC_009523|CRISPRCasFinder	4102897-4102929	33	NC_018287	Phaeobacter inhibens DSM 17395 plasmid pPGA1_78, complete sequence	9175-9207	9	0.727
NC_009523_75	75.1|4102897|33|NC_009523|CRISPRCasFinder	4102897-4102929	33	NZ_CP031950	Phaeobacter inhibens strain BS107 plasmid unnamed2, complete sequence	9175-9207	9	0.727
NC_009523_75	75.1|4102897|33|NC_009523|CRISPRCasFinder	4102897-4102929	33	NZ_CP010597	Phaeobacter inhibens strain P10 plasmid pP10_b, complete sequence	70425-70457	9	0.727
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NZ_CP045122	Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence	87532-87564	9	0.727
NC_009523_103	103.4|5434485|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5434485-5434519	35	NZ_CP039924	Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129a, complete sequence	430315-430349	9	0.743
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP050106	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence	474652-474682	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	367468-367498	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP025506	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence	464983-465013	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	357446-357476	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	398126-398156	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	373993-374023	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	360813-360843	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	367468-367498	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP050111	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence	474836-474866	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	373993-374023	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP022668	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence	353090-353120	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	354098-354128	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	53247-53277	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	104339-104369	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP020948	Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence	36377-36407	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013600	Rhizobium sp. N741 plasmid pRspN741e, complete sequence	131694-131724	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	546958-546988	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013504	Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence	131694-131724	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013510	Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence	130135-130165	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013521	Rhizobium sp. N113 plasmid pRspN113d, complete sequence	134382-134412	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013494	Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence	128500-128530	9	0.71
NC_009523_103	103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435229-5435259	31	NZ_CP013594	Rhizobium sp. N871 plasmid pRspN871d, complete sequence	131694-131724	9	0.71
NC_009523_103	103.17|5435360|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435360-5435393	34	NZ_CP045381	Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence	388260-388293	9	0.735
NC_009523_103	103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435427-5435459	33	AY320035	Bacteriophage VWB, complete genome	16628-16660	9	0.727
NC_009523_103	103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435427-5435459	33	NC_005345	Streptomyces phage VWB, complete genome	16628-16660	9	0.727
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP014310	Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence	181263-181295	9	0.727
NC_009523_103	103.22|5435694|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435694-5435726	33	NZ_AP018829	Asticcacaulis excentricus strain M6 plasmid pASEM-1, complete sequence	126662-126694	9	0.727
NC_009523_103	103.24|5435827|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435827-5435863	37	NZ_CP040763	Paracoccus sp. 2251 plasmid unnamed4, complete sequence	39467-39503	9	0.757
NC_009523_103	103.31|5436303|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436303-5436335	33	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	84088-84120	9	0.727
NC_009523_103	103.32|5436369|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436369-5436402	34	NZ_CP022365	Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence	36533-36566	9	0.735
NC_009523_103	103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436502-5436534	33	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	124140-124172	9	0.727
NC_009523_103	103.39|5436839|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436839-5436872	34	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	413069-413102	9	0.735
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MT897910	Mycobacterium phage VioletZ, complete genome	66352-66386	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MN369759	Mycobacterium phage Mithril, complete genome	66005-66039	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MT818419	Mycobacterium phage Lolalove, complete genome	66165-66199	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MN428050	Mycobacterium phage Apex, complete genome	66320-66354	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MK524486	Mycobacterium phage Waleliano, complete genome	66020-66054	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MN234171	Mycobacterium phage Magpie, complete genome	65848-65882	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MH513970	Mycobacterium phage Hangman, complete genome	66346-66380	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	KX589269	Mycobacterium phage Fortunato, complete genome	65647-65681	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MT639648	Mycobacterium phage Heath, complete genome	64134-64168	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	NC_042035	Mycobacterium phage Zemanar, complete sequence	66033-66067	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	NC_022063	Mycobacterium phage Phelemich, complete genome	63500-63534	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	KF024727	Mycobacterium phage Reprobate, complete genome	63505-63539	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	MT310870	Mycobacterium phage RawrgerThat, complete genome	65853-65887	9	0.743
NC_009523_103	103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436906-5436940	35	NC_028968	Mycobacterium phage BrownCNA, complete genome	66268-66302	9	0.743
NC_009523_103	103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437576-5437608	33	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	124140-124172	9	0.727
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP020371	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence	339493-339525	9	0.727
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP020926	Sphingobium yanoikuyae strain SHJ plasmid pSES220, complete sequence	119568-119600	9	0.727
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP022747	Sphingobium hydrophobicum strain C1 plasmid p1, complete sequence	232069-232101	9	0.727
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	24896-24928	9	0.727
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_AP018666	Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence	210755-210787	9	0.727
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP053023	Sphingobium yanoikuyae strain YC-XJ2 plasmid p-B-Sy, complete sequence	24328-24360	9	0.727
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	277964-277996	9	0.727
NC_009523_103	103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438653-5438687	35	NZ_CP031755	Rhodobacter sphaeroides strain EBL0706 plasmid p.D, complete sequence	39293-39327	9	0.743
NC_009523_103	103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438788-5438821	34	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	284771-284804	9	0.735
NC_009523_103	103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438788-5438821	34	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	580140-580173	9	0.735
NC_009523_103	103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438788-5438821	34	NZ_CP010860	Marinovum algicola DG 898 plasmid pMaD5, complete sequence	129652-129685	9	0.735
NC_009523_103	103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438788-5438821	34	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	505676-505709	9	0.735
NC_009523_103	103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438788-5438821	34	NZ_CP026489	Streptomyces sp. 604F plasmid unnamed, complete sequence	173602-173635	9	0.735
NC_009523_103	103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438788-5438821	34	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	265330-265363	9	0.735
NC_009523_103	103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438923-5438955	33	NZ_CP009405	Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p78K, complete sequence	45018-45050	9	0.727
NC_009523_103	103.74|5439192|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439192-5439225	34	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	435471-435504	9	0.735
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	142880-142913	9	0.735
NC_009523_103	103.83|5439731|35|NC_009523|CRISPRCasFinder,CRT	5439731-5439765	35	JQ067093	Pseudomonas phage PaMx74, partial genome	31443-31477	9	0.743
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP044989	Deinococcus sp. AJ005 plasmid p380k, complete sequence	240125-240159	9	0.743
NC_009523_103	103.99|5440816|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR	5440816-5440849	34	NZ_CP022700	Acetobacter tropicalis strain BDGP1 plasmid pAtBDGP1A, complete sequence	135022-135055	9	0.735
NC_009523_103	103.99|5440816|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR	5440816-5440849	34	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	405150-405183	9	0.735
NC_009523_8	8.5|797222|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797222-797253	32	MT613935	Pseudomonas phage Persinger, complete genome	8002-8033	10	0.688
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	463511-463542	10	0.688
NC_009523_8	8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797344-797375	32	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	637063-637094	10	0.688
NC_009523_36	36.1|1891995|35|NC_009523|CRISPRCasFinder	1891995-1892029	35	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	17154-17188	10	0.714
NC_009523_36	36.1|1891995|35|NC_009523|CRISPRCasFinder	1891995-1892029	35	NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	36296-36330	10	0.714
NC_009523_43	43.16|2317855|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2317855-2317889	35	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	159597-159631	10	0.714
NC_009523_43	43.16|2317855|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2317855-2317889	35	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1875267-1875301	10	0.714
NC_009523_43	43.38|2319460|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2319460-2319494	35	NC_011892	Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence	239840-239874	10	0.714
NC_009523_43	43.38|2319460|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	2319460-2319494	35	NC_011892	Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence	161984-162018	10	0.714
NC_009523_49	49.67|2432296|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2432296-2432330	35	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	565315-565349	10	0.714
NC_009523_49	49.67|2432296|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2432296-2432330	35	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	482083-482117	10	0.714
NC_009523_49	49.72|2432668|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2432668-2432705	38	NC_020275	Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence	84272-84309	10	0.737
NC_009523_49	49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2434879-2434915	37	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	234098-234134	10	0.73
NC_009523_49	49.103|2434953|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2434953-2434987	35	NZ_CP010860	Marinovum algicola DG 898 plasmid pMaD5, complete sequence	129582-129616	10	0.714
NC_009523_58	58.30|3152095|39|NC_009523|CRISPRCasFinder	3152095-3152133	39	MN585976	Mycobacterium phage Kanely, complete genome	28875-28913	10	0.744
NC_009523_58	58.42|3152988|37|NC_009523|CRISPRCasFinder	3152988-3153024	37	NZ_AP022611	Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574	8747-8783	10	0.73
NC_009523_58	58.42|3152988|37|NC_009523|CRISPRCasFinder	3152988-3153024	37	NZ_AP022611	Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574	215263-215299	10	0.73
NC_009523_58	58.58|3154179|35|NC_009523|CRISPRCasFinder	3154179-3154213	35	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	331557-331591	10	0.714
NC_009523_58	58.58|3154179|35|NC_009523|CRISPRCasFinder	3154179-3154213	35	NC_018452	Burkholderia phage DC1, complete genome	28104-28138	10	0.714
NC_009523_58	58.73|3155299|36|NC_009523|CRISPRCasFinder	3155299-3155334	36	NZ_LR134447	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence	54297-54332	10	0.722
NC_009523_58	58.74|3155372|37|NC_009523|CRISPRCasFinder	3155372-3155408	37	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	404789-404825	10	0.73
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MT241607	Achromobacter phage AMA2, complete genome	30653-30689	10	0.73
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK962627	Achromobacter phage vB_AxyS_19-32_Axy06, complete genome	2446-2482	10	0.73
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_010335	Caulobacter sp. K31 plasmid pCAUL01, complete sequence	199984-200020	10	0.73
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	190079-190115	10	0.73
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	353604-353640	10	0.73
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP044989	Deinococcus sp. AJ005 plasmid p380k, complete sequence	103802-103838	10	0.73
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KX578071	Mycobacterium phage Mana, complete genome	20449-20485	10	0.73
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KU867907	Mycobacterium phage Potter, complete genome	20458-20494	10	0.73
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_AP022333	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence	190034-190073	10	0.75
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MT776813	Mycobacterium phage Magic8, complete genome	20772-20811	10	0.75
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MH576958	Mycobacterium phage MichaelPhcott, complete genome	20334-20373	10	0.75
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP046349	Citrobacter portucalensis strain FDAARGOS_738 plasmid unnamed2, complete sequence	29368-29407	10	0.75
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MH746817	Achromobacter phage vB_Ade_ART, complete genome	33204-33243	10	0.75
NC_009523_70	70.3|3782083|35|NC_009523|CRT,CRISPRCasFinder	3782083-3782117	35	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	90927-90961	10	0.714
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	258695-258731	10	0.73
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP032327	Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence	8249-8285	10	0.73
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP032327	Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence	161381-161417	10	0.73
NC_009523_71	71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT	3854389-3854420	32	NC_018291	Phaeobacter inhibens DSM 17395 plasmid pPGA1_262, complete sequence	122618-122649	10	0.688
NC_009523_71	71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT	3854389-3854420	32	NZ_CP010596	Phaeobacter inhibens strain P10 plasmid pP10_a, complete sequence	123775-123806	10	0.688
NC_009523_71	71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT	3854389-3854420	32	NZ_CP031949	Phaeobacter inhibens strain BS107 plasmid unnamed1, complete sequence	122619-122650	10	0.688
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1520766-1520797	10	0.688
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	13531-13562	10	0.688
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1806-1837	10	0.688
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1799585-1799616	10	0.688
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	495854-495885	10	0.688
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	944534-944565	10	0.688
NC_009523_71	71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT	3854450-3854481	32	NZ_CP012886	Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence	342267-342298	10	0.688
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NC_014918	Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence	384933-384963	10	0.677
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	43654-43684	10	0.677
NC_009523_73	73.2|3969143|31|NC_009523|CRISPRCasFinder	3969143-3969173	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	66595-66625	10	0.677
NC_009523_93	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	1070119-1070151	10	0.697
NC_009523_103	103.11|5434961|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5434961-5434993	33	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	1382900-1382932	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1791215-1791247	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1345764-1345796	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	851129-851161	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP042262	Litoreibacter sp. LN3S51 plasmid unnamed1, complete sequence	241920-241952	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1177706-1177738	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1494140-1494172	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	765219-765251	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	925079-925111	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	942090-942122	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1116339-1116371	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	953991-954023	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1269301-1269333	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	839697-839729	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1773189-1773221	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	186349-186381	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	929426-929458	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1248931-1248963	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	648871-648903	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	854672-854704	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	754228-754260	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	853274-853306	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1317087-1317119	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	230191-230223	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	849416-849448	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1135998-1136030	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	929415-929447	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1317054-1317086	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	918994-919026	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	960136-960168	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1315859-1315891	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	819787-819819	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	918994-919026	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	960136-960168	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1315896-1315928	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	918994-919026	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	819810-819842	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	918998-919030	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	960136-960168	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	960136-960168	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	960136-960168	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1315896-1315928	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1109967-1109999	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1315885-1315917	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	819810-819842	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	856805-856837	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	837496-837528	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	891733-891765	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	930098-930130	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1225023-1225055	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1315885-1315917	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	819810-819842	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	918994-919026	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	994536-994568	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1317052-1317084	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	819810-819842	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	819810-819842	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1315896-1315928	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	960138-960170	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1138812-1138844	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1315907-1315939	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1315885-1315917	10	0.697
NC_009523_103	103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435493-5435525	33	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1138812-1138844	10	0.697
NC_009523_103	103.26|5435964|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435964-5435998	35	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	183743-183777	10	0.714
NC_009523_103	103.32|5436369|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436369-5436402	34	NZ_CP032350	Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence	35605-35638	10	0.706
NC_009523_103	103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436502-5436534	33	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	432653-432685	10	0.697
NC_009523_103	103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436502-5436534	33	NC_021780	Salmonella phage FSL SP-088, complete genome	20007-20039	10	0.697
NC_009523_103	103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436502-5436534	33	KC139515	Salmonella phage FSL SP-124, complete genome	19764-19796	10	0.697
NC_009523_103	103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436502-5436534	33	KR296689	Salmonella phage 35, complete genome	35471-35503	10	0.697
NC_009523_103	103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436502-5436534	33	KC139598	Salmonella phage FSL SP-019 NinC protein gene, partial cds; hypothetical proteins, virion protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds	3450-3482	10	0.697
NC_009523_103	103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5436502-5436534	33	KM366098	Salmonella phage BP12C, complete genome	21056-21088	10	0.697
NC_009523_103	103.47|5437378|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437378-5437411	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3184480-3184513	10	0.706
NC_009523_103	103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437576-5437608	33	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	432653-432685	10	0.697
NC_009523_103	103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437576-5437608	33	NC_021780	Salmonella phage FSL SP-088, complete genome	20007-20039	10	0.697
NC_009523_103	103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437576-5437608	33	KC139515	Salmonella phage FSL SP-124, complete genome	19764-19796	10	0.697
NC_009523_103	103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437576-5437608	33	KR296689	Salmonella phage 35, complete genome	35471-35503	10	0.697
NC_009523_103	103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437576-5437608	33	KC139598	Salmonella phage FSL SP-019 NinC protein gene, partial cds; hypothetical proteins, virion protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds	3450-3482	10	0.697
NC_009523_103	103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437576-5437608	33	KM366098	Salmonella phage BP12C, complete genome	21056-21088	10	0.697
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NC_031048	Enterobacter phage Arya, complete genome	7143-7175	10	0.697
NC_009523_103	103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5437981-5438013	33	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	736697-736729	10	0.697
NC_009523_103	103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438653-5438687	35	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1516662-1516696	10	0.714
NC_009523_103	103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438653-5438687	35	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	127747-127781	10	0.714
NC_009523_103	103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438788-5438821	34	NZ_CP024583	Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence	160536-160569	10	0.706
NC_009523_103	103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438923-5438955	33	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	702392-702424	10	0.697
NC_009523_103	103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438923-5438955	33	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	346155-346187	10	0.697
NC_009523_103	103.71|5438989|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438989-5439023	35	NZ_LR134455	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence	5245-5279	10	0.714
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1231841-1231874	10	0.706
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	278376-278409	10	0.706
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	124352-124385	10	0.706
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NZ_AP014810	Methylorubrum populi strain P-1M plasmid pMPPM01, complete sequence	27373-27406	10	0.706
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP032703	Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence	142053-142087	10	0.714
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	309268-309302	10	0.714
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	437221-437255	10	0.714
NC_009523_8	8.6|797283|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797283-797314	32	NZ_CP015585	Roseomonas gilardii strain U14-5 plasmid 1, complete sequence	70165-70196	11	0.656
NC_009523_8	8.9|797465|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR	797465-797496	32	NZ_CP053905	Hymenobacter sp. BRD67 plasmid unnamed1, complete sequence	12862-12893	11	0.656
NC_009523_49	49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2428907-2428943	37	NZ_CP046724	Pantoea agglomerans strain ASB05 plasmid pASB05p2, complete sequence	121390-121426	11	0.703
NC_009523_49	49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2428907-2428943	37	NZ_CP016892	Pantoea agglomerans strain C410P1 plasmid unnamed3, complete sequence	29806-29842	11	0.703
NC_009523_49	49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2428907-2428943	37	NZ_CP034471	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_2, complete sequence	48403-48439	11	0.703
NC_009523_49	49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2428907-2428943	37	NZ_CP034150	Pantoea agglomerans strain L15 plasmid pPagL15_2, complete sequence	121339-121375	11	0.703
NC_009523_49	49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2428907-2428943	37	NZ_CP034476	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_2, complete sequence	147399-147435	11	0.703
NC_009523_49	49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2428907-2428943	37	NZ_CP031651	Pantoea agglomerans strain TH81 plasmid unnamed2, complete sequence	37295-37331	11	0.703
NC_009523_49	49.23|2429057|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2429057-2429091	35	NC_029013	Citrobacter phage IME-CF2, complete genome	143494-143528	11	0.686
NC_009523_49	49.97|2434511|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2434511-2434545	35	NZ_CP043625	Glutamicibacter sp. ZJUTW plasmid pQL1, complete sequence	22713-22747	11	0.686
NC_009523_49	49.97|2434511|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2434511-2434545	35	NZ_CP038257	Microbacterium sediminis strain YLB-01 plasmid unnamed, complete sequence	105863-105897	11	0.686
NC_009523_49	49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2434879-2434915	37	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	410515-410551	11	0.703
NC_009523_58	58.74|3155372|37|NC_009523|CRISPRCasFinder	3155372-3155408	37	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1730178-1730214	11	0.703
NC_009523_58	58.74|3155372|37|NC_009523|CRISPRCasFinder	3155372-3155408	37	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	402209-402245	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	650963-650999	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085788-1085824	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054614-1054650	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1152010-1152046	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233004-233040	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644022-644058	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	633831-633867	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1301759-1301795	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895255-895291	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	773408-773444	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558008-558044	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1422622-1422658	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373780-373816	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	794563-794599	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	657636-657672	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085793-1085829	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MT241607	Achromobacter phage AMA2, complete genome	32266-32302	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KP202969	Achromobacter phage JWX, complete genome	814-850	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	KP202969	Achromobacter phage JWX, complete genome	47169-47205	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	656524-656560	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	284418-284454	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH746817	Achromobacter phage vB_Ade_ART, complete genome	33210-33246	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MT241605	Achromobacter phage AMA1, complete genome	45332-45368	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MH479916	Mycobacterium phage GeneCoco, complete genome	61855-61891	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK224592	UNVERIFIED: Mycobacterium phage Henu3, complete genome	25730-25766	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP014514	Frondihabitans sp. PAMC 28766 strain SR6 plasmid 1, complete sequence	114405-114441	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	381331-381367	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MK279849	Mycobacterium phage Duke13, complete genome	36927-36963	11	0.703
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NC_022067	Mycobacterium phage Wanda, complete genome	36953-36989	11	0.703
NC_009523_58	58.144|3154176|38|NC_009523|CRT,PILER-CR	3154176-3154213	38	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	99175-99212	11	0.711
NC_009523_58	58.144|3154176|38|NC_009523|CRT,PILER-CR	3154176-3154213	38	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	281256-281293	11	0.711
NC_009523_58	58.144|3154176|38|NC_009523|CRT,PILER-CR	3154176-3154213	38	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	264312-264349	11	0.711
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1219078-1219117	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	651323-651362	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	636317-636356	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	233364-233403	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	644382-644421	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	634191-634230	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1302119-1302158	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	895615-895654	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	558368-558407	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1422982-1423021	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	794923-794962	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	657996-658035	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1085425-1085464	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1054251-1054290	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1151647-1151686	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	773045-773084	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	292502-292541	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	373417-373456	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1226004-1226043	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	998687-998726	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1085430-1085469	11	0.725
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NC_010335	Caulobacter sp. K31 plasmid pCAUL01, complete sequence	199981-200020	11	0.725
NC_009523_103	103.6|5434622|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5434622-5434655	34	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	832078-832111	11	0.676
NC_009523_103	103.6|5434622|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5434622-5434655	34	NZ_LN681228	Xenorhabdus nematophila AN6/1 plasmid II, complete sequence	109289-109322	11	0.676
NC_009523_103	103.21|5435627|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435627-5435660	34	NZ_CP013635	Rhizobium sp. N324 plasmid pRspN324e, complete sequence	499454-499487	11	0.676
NC_009523_103	103.26|5435964|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5435964-5435998	35	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	566940-566974	11	0.686
NC_009523_103	103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439259-5439292	34	NZ_CP047377	Aeromonas salmonicida subsp. salmonicida strain J410 plasmid p1AsJ410, complete sequence	50685-50718	11	0.676
NC_009523_103	103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439259-5439292	34	NZ_CP022183	Aeromonas salmonicida strain S68 plasmid pS68-2, complete sequence	32017-32050	11	0.676
NC_009523_103	103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439259-5439292	34	NZ_CP017145	Aeromonas salmonicida subsp. masoucida strain RFAS1 plasmid unnamed2, complete sequence	52921-52954	11	0.676
NC_009523_103	103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439259-5439292	34	NZ_CP022178	Aeromonas salmonicida strain S44 plasmid pS44-3, complete sequence	47808-47841	11	0.676
NC_009523_103	103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439259-5439292	34	NZ_CP022172	Aeromonas salmonicida strain S121 plasmid pS121-3, complete sequence	16787-16820	11	0.676
NC_009523_103	103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439259-5439292	34	NZ_CP047375	Aeromonas salmonicida subsp. salmonicida strain J409 plasmid p1AsJ409, complete sequence	63221-63254	11	0.676
NC_009523_103	103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439259-5439292	34	CP052035	Aeromonas salmonicida subsp. salmonicida strain J411 plasmid p1AsJ411, complete sequence	2489-2522	11	0.676
NC_009523_103	103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439259-5439292	34	CP052035	Aeromonas salmonicida subsp. salmonicida strain J411 plasmid p1AsJ411, complete sequence	74732-74765	11	0.676
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NC_047762	Xanthomonas phage XAJ24, complete genome	5600-5633	11	0.676
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	251337-251370	11	0.676
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NC_030937	Xanthomonas phage f30-Xaj, complete genome	31556-31589	11	0.676
NC_009523_103	103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT	5439392-5439425	34	NC_030928	Xanthomonas phage f20-Xaj, complete genome	1445-1478	11	0.676
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP022566	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence	164402-164436	11	0.686
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	165507-165541	11	0.686
NC_009523_49	49.30|2429568|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2429568-2429604	37	NZ_CP018064	Rhodococcus sp. 2G plasmid p1, complete sequence	312792-312828	12	0.676
NC_009523_49	49.34|2429861|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder	2429861-2429899	39	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	968733-968771	12	0.692
NC_009523_58	58.60|3154325|37|NC_009523|CRISPRCasFinder	3154325-3154361	37	MT491206	Pseudomonas phage vB_PaeM_USP_3, complete genome	50454-50490	12	0.676
NC_009523_58	58.60|3154325|37|NC_009523|CRISPRCasFinder	3154325-3154361	37	MT491204	Pseudomonas phage vB_PaeM_USP_1, complete genome	50260-50296	12	0.676
NC_009523_58	58.60|3154325|37|NC_009523|CRISPRCasFinder	3154325-3154361	37	NC_026600	Pseudomonas phage vB_PaeM_C1-14_Ab28, complete genome	57953-57989	12	0.676
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	1004455-1004491	12	0.676
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	MN234219	Mycobacterium phage Mercurio, complete genome	24882-24918	12	0.676
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP014276	Martelella sp. AD-3 plasmid unnamed1, complete sequence	26314-26350	12	0.676
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_CP011276	Planctomyces sp. SH-PL62 plasmid pPL62-3, complete sequence	45122-45158	12	0.676
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MT241607	Achromobacter phage AMA2, complete genome	32263-32302	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	810320-810359	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_CP005085	Sphingobium sp. TKS plasmid pTK1, complete sequence	305652-305691	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MT241605	Achromobacter phage AMA1, complete genome	45326-45365	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MT241605	Achromobacter phage AMA1, complete genome	45329-45368	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	27830-27869	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	27830-27869	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	27830-27869	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MN234219	Mycobacterium phage Mercurio, complete genome	24882-24921	12	0.7
NC_009523_58	58.184|3157150|40|NC_009523|CRT,PILER-CR	3157150-3157189	40	MH479916	Mycobacterium phage GeneCoco, complete genome	61855-61894	12	0.7
NC_009523_103	103.61|5438316|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5438316-5438349	34	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	72878-72911	12	0.647
NC_009523_103	103.73|5439125|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT	5439125-5439158	34	NC_023694	Rhodococcus phage ReqiPoco6, complete genome	6310-6343	12	0.647
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	261631-261665	12	0.657
NC_009523_103	103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT	5440141-5440175	35	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	153424-153458	12	0.657
NC_009523_58	58.98|3157153|37|NC_009523|CRISPRCasFinder	3157153-3157189	37	NZ_LN832560	Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence	95325-95361	13	0.649
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	2093642-2093678	14	0.622
NC_009523_70	70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder	3783863-3783899	37	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	202142-202178	14	0.622

1. spacer 28.3|1561879|22|NC_009523|CRISPRCasFinder matches to NC_014749 (Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence) position: , mismatch: 1, identity: 0.955

gttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* **************

2. spacer 30.1|1564711|22|NC_009523|CRISPRCasFinder matches to NC_014749 (Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence) position: , mismatch: 2, identity: 0.909

gttcaaccttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
******* ************* 

3. spacer 30.2|1564760|22|NC_009523|CRISPRCasFinder matches to NC_014749 (Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence) position: , mismatch: 2, identity: 0.909

cttcaacgttcaacgttcaacc	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
 ******************** 

4. spacer 30.3|1564809|22|NC_009523|CRISPRCasFinder matches to NC_014749 (Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence) position: , mismatch: 2, identity: 0.909

cttcaaccttcaacgttcaacg	CRISPR spacer
gttcaacgttcaacgttcaacg	Protospacer
 ****** **************

5. spacer 18.1|1228981|25|NC_009523|CRISPRCasFinder matches to MG793454 (Mycobacterium phage SWU2, complete genome) position: , mismatch: 3, identity: 0.88

ggtcgcgcctccaccgctcgtcggg	CRISPR spacer
ggttgcgcccccaccgctcgtcggc	Protospacer
***.*****.************** 

6. spacer 18.1|1228981|25|NC_009523|CRISPRCasFinder matches to NZ_CP041206 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-3, complete sequence) position: , mismatch: 3, identity: 0.88

ggtcgcgcctccaccgctcgtcggg	CRISPR spacer
gttcgcgccgccaccgctcgtaggg	Protospacer
* ******* *********** ***

7. spacer 5.1|425037|26|NC_009523|CRISPRCasFinder matches to NZ_CP014792 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpB58, complete sequence) position: , mismatch: 4, identity: 0.846

atggtctttgaatacataatccgcca	CRISPR spacer
atggtctttgactacataatcagtaa	Protospacer
*********** ********* *. *

8. spacer 18.1|1228981|25|NC_009523|CRISPRCasFinder matches to MT553337 (Mycobacterium phage DroogsArmy, complete genome) position: , mismatch: 4, identity: 0.84

ggtcgcgcctccaccgctcgtcggg	CRISPR spacer
tgttgcgcccccaccgctcgtcggc	Protospacer
 **.*****.************** 

9. spacer 18.1|1228981|25|NC_009523|CRISPRCasFinder matches to JF957060 (Mycobacterium phage Timshel, complete genome) position: , mismatch: 4, identity: 0.84

ggtcgcgcctccaccgctcgtcggg	CRISPR spacer
tgttgcgcccccaccgctcgtcggc	Protospacer
 **.*****.************** 

10. spacer 25.1|1548266|25|NC_009523|CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.84

gtgcagcgctggtgcgtcccagggt	CRISPR spacer
ccgcagcgcgggtgcgtcccacggt	Protospacer
 .******* *********** ***

11. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 4, identity: 0.862

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
tgcccggcgaagcccgcctgcgcggcctg	Protospacer
 **  ******************** ***

12. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 4, identity: 0.862

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
tgcccggcgaagcccgcctgcgcggcctg	Protospacer
 **  ******************** ***

13. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP044080 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.846

gccgaccggcgcctcccggcaggcag	CRISPR spacer
gccgaccggcgccgccgggcaggccc	Protospacer
************* ** *******  

14. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NC_009958 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI04, complete sequence) position: , mismatch: 4, identity: 0.846

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctccgggccggccg	Protospacer
 *************** *** *** *

15. spacer 2.1|246655|27|NC_009523|CRISPRCasFinder matches to MK448914 (Streptococcus phage Javan348, complete genome) position: , mismatch: 5, identity: 0.815

-gtagcggattatttgttcaaagaccat	CRISPR spacer
tgctg-agattattggttcaaagaccat	Protospacer
 *. * .******* *************

16. spacer 3.2|328444|27|NC_009523|CRISPRCasFinder matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.815

agcggcgctgcacccgtacagggaggc	CRISPR spacer
agcggcgctggacccgtacaggctgcg	Protospacer
********** ***********  *  

17. spacer 18.1|1228981|25|NC_009523|CRISPRCasFinder matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 5, identity: 0.8

ggtcgcgcctccaccgctcgtcggg	CRISPR spacer
tgtcgcgcctccatcgctcgtctcc	Protospacer
 ************.********   

18. spacer 18.1|1228981|25|NC_009523|CRISPRCasFinder matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 5, identity: 0.8

ggtcgcgcctccaccgctcgtcggg	CRISPR spacer
tgtcgcgcctccatcgctcgtctcc	Protospacer
 ************.********   

19. spacer 18.1|1228981|25|NC_009523|CRISPRCasFinder matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 5, identity: 0.8

ggtcgcgcctccaccgctcgtcggg	CRISPR spacer
tgtcgcgcctccatcgctcgtctcc	Protospacer
 ************.********   

20. spacer 73.1|3969083|30|NC_009523|CRISPRCasFinder matches to NZ_CP017565 (Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence) position: , mismatch: 5, identity: 0.833

ccgacggcgcacaccagcccgcacaggctg--	CRISPR spacer
ccgaccgcccacaccagcccg--cagactgag	Protospacer
***** ** ************  ***.***  

21. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

cgtg-cgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
-gtatcgggtcggcgtgtttgtcggggtgat	Protospacer
 **. ** ***************** *** *

22. spacer 78.8|4198886|30|NC_009523|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 5, identity: 0.833

cgtg-cgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
-gtatcgggtcggcgtgtttgtcggggtgat	Protospacer
 **. ** ***************** *** *

23. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

cgtg-cgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
-gtatcgggtcggcgtgtttgtcggggtgat	Protospacer
 **. ** ***************** *** *

24. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

cgtg-cgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
-gtatcgggtcggcgtgtttgtcggggtgat	Protospacer
 **. ** ***************** *** *

25. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

cgtg-cgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
-gtatcgggtcggcgtgtttgtcggggtgat	Protospacer
 **. ** ***************** *** *

26. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

cgtg-cgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
-gtatcgggtcggcgtgtttgtcggggtgat	Protospacer
 **. ** ***************** *** *

27. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

28. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

29. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

30. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

31. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

32. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

33. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

34. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

35. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

36. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

37. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

38. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cccgaccggcgcctcccggccgcgcg	Protospacer
 ******************* *   *

39. spacer 99.2|5244293|31|NC_009523|CRT matches to MF495478 (Aeromonas salmonicida plasmid pS121-1b, complete sequence) position: , mismatch: 5, identity: 0.839

ggtggaaggttgaaggttgcaggttgcaggt	CRISPR spacer
tgatgcaggttgcaggttgcaggttgcaggt	Protospacer
 *  * ****** ******************

40. spacer 99.2|5244293|31|NC_009523|CRT matches to NZ_CP038450 (Aeromonas media strain R50-22 plasmid pAeme6, complete sequence) position: , mismatch: 5, identity: 0.839

ggtggaaggttgaaggttgcaggttgcaggt	CRISPR spacer
tgatgcaggttgcaggttgcaggttgcaggt	Protospacer
 *  * ****** ******************

41. spacer 99.2|5244293|31|NC_009523|CRT matches to NZ_CP022170 (Aeromonas salmonicida strain S121 plasmid pS121-1a, complete sequence) position: , mismatch: 5, identity: 0.839

ggtggaaggttgaaggttgcaggttgcaggt	CRISPR spacer
tgatgcaggttgcaggttgcaggttgcaggt	Protospacer
 *  * ****** ******************

42. spacer 103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 5, identity: 0.848

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
ggcttcggcgcggcgatggcgtacctcaccgac	Protospacer
*   ************.**********.*****

43. spacer 103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 5, identity: 0.848

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
ggcttcggcgcggcgatggcgtacctcaccgac	Protospacer
*   ************.**********.*****

44. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019636 (Enterobacter sp. 18A13 plasmid pECC18A13-2, complete sequence) position: , mismatch: 6, identity: 0.812

atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
gtcgaacggccggagcgcagcgaccgagtgag	Protospacer
.****** *****************.* .* *

45. spacer 25.1|1548266|25|NC_009523|CRISPRCasFinder matches to NZ_CP022425 (Vitreoscilla filiformis strain ATCC 15551 plasmid pVF2, complete sequence) position: , mismatch: 6, identity: 0.76

gtgcagcgctggtgcgtcccagggt	CRISPR spacer
cgccagcgctggtgcgtcccagacc	Protospacer
   *******************. .

46. spacer 58.32|3152243|37|NC_009523|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.838

cctgcgac--gtcagcgacagcgcgacgcccagcgcctg	CRISPR spacer
--tgcggctgaccagcgactgcgcgacgcccagcgcctg	Protospacer
  ****.*  ..******* *******************

47. spacer 58.43|3153062|36|NC_009523|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.833

gcgacgccgagcgccgggccgcgcggcttggcgcgg---	CRISPR spacer
ccgccgccgagcgcctggccgcgcggct---cgcgggca	Protospacer
 ** *********** ************   *****   

48. spacer 58.43|3153062|36|NC_009523|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.833

gcgacgccgagcgccgggccgcgcggcttggcgcgg---	CRISPR spacer
ccgccgccgagcgcctggccgcgcggct---cgcgggca	Protospacer
 ** *********** ************   *****   

49. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP013524 (Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence) position: , mismatch: 6, identity: 0.838

gtctccggcgctgccgccgccgccg-ccgccgcgtccg	CRISPR spacer
ctcgccggcgctgccgccgccgccgccctcctcgtct-	Protospacer
 ** ********************* ** ** ****. 

50. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.793

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
agccagtcgaagcccgcctgcgcggccat	Protospacer
.** ** ****************** *  

51. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 6, identity: 0.793

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
agcgaggcgaagccggcctgcgcggcgag	Protospacer
.**.********** **********   *

52. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 6, identity: 0.793

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
agccagtcgaagcccgcctgcgcggccat	Protospacer
.** ** ****************** *  

53. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 6, identity: 0.793

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
tgcgcggcgaggcccgcctgcgagggctt	Protospacer
 **. *****.*********** ***** 

54. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.806

-gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
cgagc-gcagcagcgtcggcgcgaagatcagc	Protospacer
 ** * ****************** .***  *

55. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.806

-gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
cgagc-gcagcagcgtcggcgcgaagatcagc	Protospacer
 ** * ****************** .***  *

56. spacer 78.8|4198886|30|NC_009523|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgcgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
ccagcaggtcggggtgtttgtcggtgtgat	Protospacer
*  **. ***** *************** *

57. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgcgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
cgaacgtgtcggcgggtttgccggtgtgcg	Protospacer
** .********** *****.*******. 

58. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP041249 (Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgcgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
cgtgtttgtcggcgtgtttgtcgtttttct	Protospacer
****. ***************** * * .*

59. spacer 80.1|4347600|26|NC_009523|CRISPRCasFinder matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 6, identity: 0.769

gccgaccggcgcctcccggcaggcag	CRISPR spacer
cgcgaccggcgccgcccggcaggtcc	Protospacer
  *********** *********.  

60. spacer 103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.818

ccggcgcc-ccggtgtcggcatgcacgccgtaca	CRISPR spacer
-tggcgtcggcggtgtcggcatgaacgccgtcca	Protospacer
 .****.*  ************* ******* **

61. spacer 103.61|5438316|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 6, identity: 0.824

gcggatcgaggaaggcgcggagatcgcaatcacc	CRISPR spacer
gcgccaggtggaaggcgcggagatcgcactcacc	Protospacer
***    * ******************* *****

62. spacer 103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MN813693 (Mycobacterium phage Imvubu, complete genome) position: , mismatch: 6, identity: 0.818

ccggggaccccgtgcgctgcggcgcggcgctgg-	CRISPR spacer
ccggcgaccccgtgcgctgcggcg-agtgccgag	Protospacer
**** ******************* .*.**.*. 

63. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 6, identity: 0.829

cggcgcgc-tcagcagcagcaccgccagcgttgcga	CRISPR spacer
-gacgcacggcagcagcagcaccgccagcgccgcga	Protospacer
 *.***.*  ********************..****

64. spacer 103.107|5441353|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 6, identity: 0.818

gccagcgcctcaagcaccttcgcggctttcggc	CRISPR spacer
gccagcgcctcaagcaccctcgctgcctgatgc	Protospacer
******************.**** **.*   **

65. spacer 8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NC_029046 (Sinorhizobium phage phiLM21, complete genome) position: , mismatch: 7, identity: 0.781

tacacc-accagcagaacgttgccgacgacgcg	CRISPR spacer
-acgctaaccagcagacctttgccgacgactgg	Protospacer
 **.*. ********* * ***********  *

66. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NC_002112 (Streptomyces cyaneus plasmid pSA1.1, complete sequence) position: , mismatch: 7, identity: 0.781

-atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
catc-aaccgctggagcgcaccgaccaacatgt	Protospacer
 *** ******.******** ********    

67. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
ttcgaacggccggagcgcggcgacgacatgcg	Protospacer
 ****** **********.***** *  .***

68. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 7, identity: 0.781

atcgaaccgccggagcgcagcga--ccaaccgcg	CRISPR spacer
atcgaaccgccggcgcgccgcgatgccgatct--	Protospacer
************* **** ****  **.*.*   

69. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN997849 (Magnetospirillum sp. XM-1 isolate XM1 plasmid II, complete sequence) position: , mismatch: 7, identity: 0.781

atcgaaccgccggagcgcagcgaccaaccgcg-	CRISPR spacer
gtggaacagccggatcgcagcgaccag-ggcgt	Protospacer
.* **** ****** ***********.  *** 

70. spacer 23.1|1492791|28|NC_009523|CRISPRCasFinder matches to NZ_CP025552 (Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gtacaggggggtgtgcgcggggcgaggc	CRISPR spacer
agggtggggggtgtgcgggggccgaggc	Protospacer
. .  ************ *** ******

71. spacer 39.1|2110434|33|NC_009523|CRISPRCasFinder matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 7, identity: 0.788

gccaggcaagcgccagcgcaatcacgccgtcgt	CRISPR spacer
cgtcggcaagcgccagtgcaatcaagccgtcct	Protospacer
  . ************.******* ****** *

72. spacer 43.10|2317414|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.816

---atcacacgcagcagatcgagccactggccgccgccacg	CRISPR spacer
tcgatca---gcaccagatcgggccactggccgccgctgcg	Protospacer
   ****   *** *******.***************..**

73. spacer 43.10|2317414|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.816

---atcacacgcagcagatcgagccactggccgccgccacg	CRISPR spacer
tcgatca---gcaccagatcgggccactggccgccgctgcg	Protospacer
   ****   *** *******.***************..**

74. spacer 43.10|2317414|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.816

---atcacacgcagcagatcgagccactggccgccgccacg	CRISPR spacer
tcgatca---gcaccagatcgggccactggccgccgctgcg	Protospacer
   ****   *** *******.***************..**

75. spacer 43.29|2318801|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.8

gtgtgtagtagcgcttgcgcgcggttatctcaatg	CRISPR spacer
tggaggagtagggcttgcccgcggttatctcaatc	Protospacer
  * * ***** ****** *************** 

76. spacer 43.31|2318945|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 7, identity: 0.811

--tcgcggcagaggcagcatctcgccgaaggcggcgaag	CRISPR spacer
catcacggc--ccgcagcatctcgaggaaggcggcgaag	Protospacer
  **.****    ***********  *************

77. spacer 43.41|2319679|38|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 7, identity: 0.816

gtcgaaggtgacgacctcgtagttggtgtcaccggtga	CRISPR spacer
gtcgggggtgacgacctcgtagttggtggcccagccga	Protospacer
****..********************** * * * .**

78. spacer 46.1|2382967|31|NC_009523|CRISPRCasFinder matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.774

tcgctcaggtcggcgtaggttttgagccaaa	CRISPR spacer
gggtgcaggtcggcgtccgttttgagccaga	Protospacer
  *. ***********  ***********.*

79. spacer 49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

tctgcgccc---cagtcgtcgagcgccgcaagcagcgcgt	CRISPR spacer
---gcgggcgggccgtcgtcgagcgccgcaagccgcgcgt	Protospacer
   ***  *   * ******************* ******

80. spacer 58.46|3153283|36|NC_009523|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.806

caactcgcg-ccgccgcttcacgctgcgcgcgctccg	CRISPR spacer
-gacgcccgagcgccgctcctcgctgcgcgcgctccg	Protospacer
 .** * **  *******.* ****************

81. spacer 58.83|3156038|38|NC_009523|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.816

cggctt--cccgcgccgcctccgcgcgccacgcccgccac	CRISPR spacer
--gcttggcccgcgccgccgccgcgcgccacgcccagccg	Protospacer
  ****  *********** ***************. *  

82. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 7, identity: 0.811

gtctccg----gcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
----ccggcgcgcgctgccgcggccggcgccgccgcgtccc	Protospacer
    ***    ********** **** ************* 

83. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK962627 (Achromobacter phage vB_AxyS_19-32_Axy06, complete genome) position: , mismatch: 7, identity: 0.811

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgtcg	Protospacer
*.* *** ***.********************  .**

84. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.811

gtctccggcgctgccgccgccgccgccgccg--cgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgatcgac--	Protospacer
*..********.**** **************  ** *  

85. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.811

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccaccgccgccgccgccgccgccgccgccggagccg	Protospacer
*.* *** ***.******************* . ***

86. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MN369753 (Gordonia phage Sukkupi, complete genome) position: , mismatch: 7, identity: 0.811

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttaccggcaccgccgccgccgccgccgccgatcccg	Protospacer
**. *****.*.*******************  .***

87. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK376960 (Gordonia phage BiPauneto, complete genome) position: , mismatch: 7, identity: 0.811

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttaccggcaccgccgccgccgccgccgccgatcccg	Protospacer
**. *****.*.*******************  .***

88. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MN369766 (Gordonia phage Yndexa, complete genome) position: , mismatch: 7, identity: 0.811

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttaccggcaccgccgccgccgccgccgccgatcccg	Protospacer
**. *****.*.*******************  .***

89. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 7, identity: 0.825

-gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gggcgtc-ccgccgccgccgccgccgccgccgccgccgtcg	Protospacer
 *.**** *** ***.********************  .**

90. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 7, identity: 0.825

gacgtctccg-gcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
-acgccggcgcgcgctgccgcggccggcgccgccgcgtccc	Protospacer
 ***.*  ** ********** **** ************* 

91. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 7, identity: 0.759

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ccggaggcgaagcccgccctcgcgggcag	Protospacer
   .**************. ******* *

92. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 7, identity: 0.759

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
atctgtgggaaacccgcctgcgcgggctg	Protospacer
. * . * ***.*****************

93. spacer 70.3|3782083|35|NC_009523|CRT,CRISPRCasFinder matches to KT381865 (Pelagibaca phage vB_PeaS-P1, partial genome) position: , mismatch: 7, identity: 0.8

gcttgcctggcgcaggcgccggacgacgcggacgt	CRISPR spacer
gcccgcctggagcaggcgctggacgacgcgagcgc	Protospacer
**..****** ********.**********..**.

94. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP040824 (Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence) position: , mismatch: 7, identity: 0.781

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
ctcggcccggtgcccgcggtgcgcagggctct	Protospacer
 *. ********* ****.********** * 

95. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 7, identity: 0.774

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
cttgagcagcagcgtcggcgcggcgatccgc	Protospacer
  * .*****************.*.**** *

96. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to MH617445 (Inoviridae sp. isolate ctcf2, complete genome) position: , mismatch: 7, identity: 0.774

gatcggcagcagcgtcggcgcgacaatcccc---	CRISPR spacer
gatcggcagcagcctgggcgcg---agctccagg	Protospacer
************* * ******   * *.**   

97. spacer 78.8|4198886|30|NC_009523|CRT matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 7, identity: 0.767

cgtgcgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
gctgcgtgtcggcgggtttgccggtgttga	Protospacer
  ************ *****.******   

98. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP053952 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

cgtgcgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
caatcgtgttggagtgtttgtcggtgttat	Protospacer
*.  *****.** **************  *

99. spacer 78.8|4198886|30|NC_009523|CRT matches to NZ_CP053949 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

cgtgcgtgtcggcgtgtttgtcggtgtgtt	CRISPR spacer
caatcgtgttggagtgtttgtcggtgttat	Protospacer
*.  *****.** **************  *

100. spacer 86.1|4629137|33|NC_009523|CRISPRCasFinder matches to NZ_CP021408 (Celeribacter manganoxidans strain DY25 plasmid pDY25-D, complete sequence) position: , mismatch: 7, identity: 0.788

gtctggcgcgtgaacggcaaatacg-cgggcagt	CRISPR spacer
gatctgcgcgtgaacggcaaatatgccggacag-	Protospacer
* .. ******************.* ***.*** 

101. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.788

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
tggcaacaccgaagcgcgcctgcgctggctata	Protospacer
*.** * . ****** ********* *******

102. spacer 103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027296 (Streptomyces sp. SGAir0924 plasmid unnamed_1, complete sequence) position: , mismatch: 7, identity: 0.788

-----ccggcgccccggtgtcggcatgcacgccgtaca	CRISPR spacer
ggccgccgg-----cggtgtcggcatggccgccgtaca	Protospacer
     ****     *************  *********

103. spacer 103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027298 (Streptomyces sp. SGAir0924 plasmid unnamed_4, complete sequence) position: , mismatch: 7, identity: 0.788

-----ccggcgccccggtgtcggcatgcacgccgtaca	CRISPR spacer
ggccgccgg-----cggtgtcggcatggccgccgtaca	Protospacer
     ****     *************  *********

104. spacer 103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027299 (Streptomyces sp. SGAir0924 plasmid unnamed_5) position: , mismatch: 7, identity: 0.788

-----ccggcgccccggtgtcggcatgcacgccgtaca	CRISPR spacer
ggccgccgg-----cggtgtcggcatggccgccgtaca	Protospacer
     ****     *************  *********

105. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022197 (Celeribacter ethanolicus strain TSPH2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
atcgatctcgacctcgaccgcatcgccgtcacg	Protospacer
  * ******** **.**************.* 

106. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021117 (Rhodobacteraceae bacterium strain G7 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.788

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
atcgatctcgacctcgaccgcatcgccgtcacg	Protospacer
  * ******** **.**************.* 

107. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004396 (Celeribacter indicus strain P73 plasmid pP73C, complete sequence) position: , mismatch: 7, identity: 0.788

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
atcgatctcgacctcgaccgcatcgccgtcacg	Protospacer
  * ******** **.**************.* 

108. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 7, identity: 0.788

cgccat-ctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
-gccgcactcgaaatcaaccgcatcgccggcgag	Protospacer
 ***.. ***** **************** **  

109. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_020061 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence) position: , mismatch: 7, identity: 0.788

cgccat-ctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
-gccgcactcgaaatcaaccgcatcgccggcgag	Protospacer
 ***.. ***** **************** **  

110. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024313 (Rhizobium sp. NXC24 plasmid pRspNXC24b, complete sequence) position: , mismatch: 7, identity: 0.788

cgccat-ctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
-gccgcactcgaaatcaaccgcatcgccggcgag	Protospacer
 ***.. ***** **************** **  

111. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032692 (Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence) position: , mismatch: 7, identity: 0.788

cgccat-ctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
-gccgcactcgaaatcaaccgcatcgccggcgag	Protospacer
 ***.. ***** **************** **  

112. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to AP021852 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-3 DNA, complete genome) position: , mismatch: 7, identity: 0.788

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
catcccctcgacatcaaccccatcgccgccgtc	Protospacer
*..* .************* ********.**.*

113. spacer 103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.8

cggtgatgtccggcgcggcgccggcggctatgctg	CRISPR spacer
ccgtgctgtccggcgcggtgccggcggccgagcgg	Protospacer
* *** ************.*********.. ** *

114. spacer 103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.794

gggacagggcggcagcggcgccgtcctgcttgtg	CRISPR spacer
gggcgcgggcggcagcggcgcggtcctgctcgat	Protospacer
***   *************** ********.*  

115. spacer 103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 7, identity: 0.788

ccggggaccccgtgcgctgcggcgcggcgctgg	CRISPR spacer
ccatcgtggccgcgcgctgcggcgcggcgctgg	Protospacer
**.  *   ***.********************

116. spacer 103.71|5438989|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025505 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence) position: , mismatch: 7, identity: 0.8

cgtgctgc--tccgcgccgcgcaggcgtcaacgcgcg	CRISPR spacer
--atctgcaatccgcgccgcgcaggcgccaacgcgga	Protospacer
    ****  *****************.******* .

117. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NC_006912 (Streptomyces sp. FQ1 plasmid pFP1, complete sequence) position: , mismatch: 7, identity: 0.794

gctgc-tggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
-ctacgtcctcaacccggacaccggcgagatggag	Protospacer
 **.* *  ******  *****************.

118. spacer 103.107|5441353|33|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013105 (Paraburkholderia caribensis strain MWAP64 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.788

gccagcgcctcaagcaccttcgcg--gctttcggc	CRISPR spacer
gccagcggctcaaggaccttcgcgtaattatcg--	Protospacer
******* ****** *********  ..* ***  

119. spacer 3.1|328389|31|NC_009523|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 8, identity: 0.742

gtaggggcgcagcactgctgcgaccagacgg	CRISPR spacer
agagccaggcagcactgctgcgaccaggcgc	Protospacer
. **  . *******************.** 

120. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017756 (Cupriavidus malaysiensis strain USMAA1020 isolate pure plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
cggctggctgtcgacgcgccgatgattgcggt	Protospacer
* * . ***.*********.**********  

121. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
cggctggctgtcgacgcgccgatgattgcggt	Protospacer
* * . ***.*********.**********  

122. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX912253 (Enterobacter asburiae strain H162620587 plasmid pJF-587, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatggccgt	Protospacer
   ***   *** **************** **   

123. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017473 (Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatagccgt	Protospacer
   ***   *** **************** **   

124. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017473 (Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatagccgt	Protospacer
   ***   *** **************** **   

125. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017473 (Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatagccgt	Protospacer
   ***   *** **************** **   

126. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017473 (Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatagccgt	Protospacer
   ***   *** **************** **   

127. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034768 (Enterobacter sp. N18-03635 plasmid pFRI-6, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatggccgt	Protospacer
   ***   *** **************** **   

128. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 8, identity: 0.75

ctgacc--gctatcgacgcgctgatgattgcgca	CRISPR spacer
--gatccggctatcgtcgcgctgctgattgccgt	Protospacer
  **.*  ******* ******* *******   

129. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

ctgacc--gctatcgacgcgctgatgattgcgca	CRISPR spacer
--gatccggctatcgtcgcgctgctgattgccgt	Protospacer
  **.*  ******* ******* *******   

130. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049248 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ctgaccg--ctatcgacgcgctgatgattgcgca	CRISPR spacer
--tatcgttttatcgaagcgccgatgattgcgct	Protospacer
   *.**  .****** ****.*********** 

131. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019633 (Enterobacter asburiae strain 1808-013 plasmid pEAS1808-013-1, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatggccgt	Protospacer
   ***   *** **************** **   

132. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019631 (Enterobacter asburiae strain 17Nkhm-UP2 plasmid pEAS17Nkhm-UP2-1, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatggccgt	Protospacer
   ***   *** **************** **   

133. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 8, identity: 0.75

---ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gaactg---gctctcgacgcgctgatgatggccgt	Protospacer
   ***   *** **************** **   

134. spacer 8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

tacaccaccagcagaacgttgccgacgacgcg	CRISPR spacer
gtcgattccagcagcacgtcgccgacgacgcg	Protospacer
  *. . ******* ****.************

135. spacer 8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

tacacc----accagcagaacgttgccgacgacgcg	CRISPR spacer
----ccgtaaaccagcagaaccatgccgacgacagg	Protospacer
    **    ***********  **********. *

136. spacer 8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

tacaccaccagcagaacgttgccgacgacgcg	CRISPR spacer
agcaccagcagcagcacgttgccgatgtagag	Protospacer
 .***** ****** **********.*  * *

137. spacer 8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 8, identity: 0.75

tacaccaccagcagaacgttgccgacgacgcg	CRISPR spacer
agcaccagcagcagcacgttgccgatgtagag	Protospacer
 .***** ****** **********.*  * *

138. spacer 8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.75

tacaccaccagcagaacgttgccgacgacgcg	CRISPR spacer
agcaccagcagcagcacgttgccgatgtagag	Protospacer
 .***** ****** **********.*  * *

139. spacer 8.10|797526|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 8, identity: 0.75

tacaccaccagcagaacgttgccgacgacgcg	CRISPR spacer
agcaccagcagcagcacgttgccgatgtagag	Protospacer
 .***** ****** **********.*  * *

140. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NC_009794 (Citrobacter koseri ATCC BAA-895 plasmid pCKO2, complete sequence) position: , mismatch: 8, identity: 0.75

atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
gccgaacggcaggagcgcagcgaccgagtgag	Protospacer
..***** ** **************.* .* *

141. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011586 (Enterobacter asburiae strain CAV1043 plasmid pCAV1043-10, complete sequence) position: , mismatch: 8, identity: 0.75

atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
gccgaacggccggagcgtagcgaccgagtgag	Protospacer
..***** *********.*******.* .* *

142. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NC_015175 (Enterobacter cloacae plasmid pS51A, complete sequence) position: , mismatch: 8, identity: 0.75

atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
gccgaacggccggagcgtagcgaccgagtgag	Protospacer
..***** *********.*******.* .* *

143. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR792631 (Klebsiella pneumoniae isolate SB5881 plasmid SB5881_III) position: , mismatch: 8, identity: 0.75

atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
gccgaacggccggagcgtagcgaccgagtgag	Protospacer
..***** *********.*******.* .* *

144. spacer 24.1|1517465|31|NC_009523|CRISPRCasFinder matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 8, identity: 0.742

taagacgccgggggcgcggagatttccatcg	CRISPR spacer
gacggtcccgggggcgcggatatttccgtca	Protospacer
 * *.. ************* ******.**.

145. spacer 24.1|1517465|31|NC_009523|CRISPRCasFinder matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 8, identity: 0.742

taagacgccgggggcgcggagatttccatcg	CRISPR spacer
gacggtcccgggggcgcggatatttccgtca	Protospacer
 * *.. ************* ******.**.

146. spacer 24.1|1517465|31|NC_009523|CRISPRCasFinder matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 8, identity: 0.742

taagacgccgggggcgcggagatttccatcg	CRISPR spacer
gacggtcccgggggcgcggatatttccgtca	Protospacer
 * *.. ************* ******.**.

147. spacer 24.1|1517465|31|NC_009523|CRISPRCasFinder matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 8, identity: 0.742

taagacgccgggggcgcggagatttccatcg	CRISPR spacer
gacggtcccgggggcgcggatatttccgtca	Protospacer
 * *.. ************* ******.**.

148. spacer 24.1|1517465|31|NC_009523|CRISPRCasFinder matches to NZ_CP030220 (Salmonella enterica strain SA20021456 plasmid pSA20021456.1, complete sequence) position: , mismatch: 8, identity: 0.742

taagacgccgggggcgcggagatttccatcg	CRISPR spacer
gacggtcccgggggcgcggatatttccgtca	Protospacer
 * *.. ************* ******.**.

149. spacer 24.1|1517465|31|NC_009523|CRISPRCasFinder matches to NZ_CP018634 (Salmonella enterica subsp. enterica serovar Enteritidis strain 49-2444 plasmid pSE49-2444, complete sequence) position: , mismatch: 8, identity: 0.742

taagacgccgggggcgcggagatttccatcg	CRISPR spacer
gacggtcccgggggcgcggatgtttccatca	Protospacer
 * *.. ************* .********.

150. spacer 43.32|2319019|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.778

gcaaactcgcgcagcgcccaggcgaggatgacgacg-	CRISPR spacer
tattgctcgcgcagcgccgaggccaggatgac-acgc	Protospacer
    .************* **** ******** *** 

151. spacer 44.6|2322126|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021373 (Rhizobium sp. ACO-34A plasmid pRACO34Ac, complete sequence) position: , mismatch: 8, identity: 0.778

gcgacgatcggcgtcaaccgcgcctccggcagcacg	CRISPR spacer
ctgatgggcggcgtcacccgcgcctccggcggcacc	Protospacer
 .**.*. ******** *************.**** 

152. spacer 46.1|2382967|31|NC_009523|CRISPRCasFinder matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 8, identity: 0.742

tcgctcaggtcggcgtaggttttgagccaaa	CRISPR spacer
gcgcccaggtcggcgtaagttttgatatcta	Protospacer
 ***.************.*******  .  *

153. spacer 49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.784

tctgcgccc---cagtcgtcgagcgccgcaagcagcgcgt	CRISPR spacer
---gcgggcgggccgtcgtcgagcgccgcgagccgcgcgt	Protospacer
   ***  *   * ***************.*** ******

154. spacer 58.20|3153060|38|NC_009523|PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.789

acgcgacgccgagcgccgggccgcgcggcttggcgcgg---	CRISPR spacer
tgccgccgccgagcgcctggccgcgcggct---cgcgggca	Protospacer
   ** *********** ************   *****   

155. spacer 58.20|3153060|38|NC_009523|PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.789

acgcgacgccgagcgccgggccgcgcggcttggcgcgg---	CRISPR spacer
tgccgccgccgagcgcctggccgcgcggct---cgcgggca	Protospacer
   ** *********** ************   *****   

156. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcaccacgcccgccacacggcggcgattccgg--	CRISPR spacer
ccaccaccgcgcccgccacgcggcggcga--ccggac	Protospacer
..  ****.**********.*********  ****  

157. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcaccacgcccgccacacggcggcgattccgg--	CRISPR spacer
ccaccaccgcgcccgccacgcggcggcga--ccggac	Protospacer
..  ****.**********.*********  ****  

158. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KX388535 (Agrobacterium tumefaciens strain EU6 plasmid pTiEU6, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

159. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000059 (Agrobacterium tumefaciens strain CFBP1898 plasmid pTi_CFBP1898, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

160. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_CP042277 (Agrobacterium tumefaciens strain 186 plasmid pTi, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

161. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_CP039927 (Agrobacterium tumefaciens strain CFBP7129 plasmid pTiCFBP7129, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

162. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_CP032925 (Agrobacterium tumefaciens strain 1D1108 plasmid pTi1D1108, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

163. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_CP033026 (Agrobacterium fabrum strain 1D132 plasmid pTi1D132, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

164. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000064 (Agrobacterium tumefaciens strain CFBP7126 plasmid pTi_CFBP7126, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

165. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000069 (Agrobacterium deltaense strain Tun176 plasmid pTi_Tun176, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

166. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000058 (Agrobacterium rhizogenes strain CFBP1317 plasmid pTi_CFBP1317, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

167. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000070 (Agrobacterium tumefaciens strain Tun178 plasmid pTi_Tun178, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

168. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000065 (Agrobacterium tumefaciens strain CFBP7128 plasmid pTi_CFBP7128, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

169. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000066 (Agrobacterium deltaense strain CFBP7129 plasmid pTi_CFBP7129, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

170. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000062 (Agrobacterium genomosp. 3 strain CFBP4424 plasmid pTi_CFBP4424, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

171. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000073 (Agrobacterium tumefaciens strain Tun188 plasmid pTi_Tun188, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

172. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000071 (Agrobacterium tumefaciens strain Tun183 plasmid pTi_Tun183, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--cgcattgatcgccagccacacggcggcgatgccga	Protospacer
  ****...  **** **************** ***.

173. spacer 58.46|3153283|36|NC_009523|CRISPRCasFinder matches to NC_015180 (Acidiphilium multivorum AIU301 plasmid pACMV5, complete sequence) position: , mismatch: 8, identity: 0.778

caactcgcgccgccgcttcacgctgcgcgcgctccg	CRISPR spacer
caacgcgcgcggccgcttcacgctgctgatgcagcg	Protospacer
**** ***** ***************  ..**  **

174. spacer 58.58|3154179|35|NC_009523|CRISPRCasFinder matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcccgcgcttccgcctcggcccgagcggccgc	CRISPR spacer
ttcgcccgcgctgctgcctcggcccgaactgttcg	Protospacer
************ *.************.* *..  

175. spacer 58.58|3154179|35|NC_009523|CRISPRCasFinder matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcccgcgcttccgcctcggcccgagcggccgc	CRISPR spacer
ttcgcccgcgctgctgcctcggcccgaactgttcg	Protospacer
************ *.************.* *..  

176. spacer 58.58|3154179|35|NC_009523|CRISPRCasFinder matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 8, identity: 0.771

ttcgcccgcgcttccgcctcggcccgagcggccgc	CRISPR spacer
ttcgcccgcgctgctgcctcggcccgaactgttcg	Protospacer
************ *.************.* *..  

177. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

178. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

179. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

180. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

181. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

182. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

183. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

184. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

185. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

186. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

187. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

188. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

189. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

190. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

191. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

192. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

193. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

194. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

195. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

196. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

197. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

198. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

199. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

200. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

201. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

202. spacer 58.91|3156636|36|NC_009523|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.778

gcgcctgcgcctccgcatgcgcccgccatacggcga--	CRISPR spacer
gcgcctgcgccgctgcatgcgcccgc--tcaggcaggc	Protospacer
*********** *.************  *  ***..  

203. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---gccgccgccgccgccgccgccgccgccgccgccgtcc	Protospacer
    *** ***.********************  ***   

204. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MF919511 (Mycobacterium phage Kailash, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

205. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH727555 (Mycobacterium phage Mulan, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cccgccgccgccgccgccgccgccgccgccgccgggt	Protospacer
   .*** ***.********************  ***   

206. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MT776813 (Mycobacterium phage Magic8, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

207. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MG757164 (Mycobacterium phage PhenghisKhan, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

208. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MT241607 (Achromobacter phage AMA2, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgcta	Protospacer
*.* *** ***.********************  *..

209. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MG757165 (Mycobacterium phage Phergie, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

210. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH371114 (Mycobacterium phage Childish, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cccgccgccgccgccgccgccgccgccgccgccgggt	Protospacer
   .*** ***.********************  ***   

211. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK279864 (Mycobacterium phage Mag7, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

212. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH155874 (Mycobacterium phage PhrankReynolds, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

213. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH576958 (Mycobacterium phage MichaelPhcott, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

214. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK112553 (Mycobacterium Phage Squiggle, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cccgccgccgccgccgccgccgccgccgccgccgggt	Protospacer
   .*** ***.********************  ***   

215. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH316568 (Mycobacterium phage Phleuron, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

216. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KP202970 (Achromobacter phage 83-24, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgcct---	Protospacer
   *.* *** ***.******************** *   

217. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KP202970 (Achromobacter phage 83-24, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgcctttt	Protospacer
*.* *** ***.******************** *.. 

218. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KP202970 (Achromobacter phage 83-24, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgcct---	Protospacer
   *.* *** ***.******************** *   

219. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KP202970 (Achromobacter phage 83-24, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgcctttt	Protospacer
*.* *** ***.******************** *.. 

220. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KP202970 (Achromobacter phage 83-24, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccttttctg	Protospacer
*.* *** ***.****************** . **.*

221. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KP202970 (Achromobacter phage 83-24, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccttttctg	Protospacer
*.* *** ***.****************** . **.*

222. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MG962363 (Mycobacterium phage BatteryCK, complete genome) position: , mismatch: 8, identity: 0.784

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   *.* *** ***.******************* **   

223. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accaccgccgccgccgccgccgccgccgccgccacca	Protospacer
..* *** ***.********************  **.

224. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accaccgccgccgccgccgccgccgccgccgccacca	Protospacer
..* *** ***.********************  **.

225. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccaccgccgccgccgccgccgccgccgccgcccatg	Protospacer
*.* *** ***.******************** . .*

226. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgcccgagccg	Protospacer
*.* *** ***.******************  . ***

227. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP046349 (Citrobacter portucalensis strain FDAARGOS_738 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
agttccggcgctaccgcagccgccgccgccgtgacgg	Protospacer
. .*********.**** *************.* * *

228. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accaccgccgccgccgccgccgccgccgccgccacca	Protospacer
..* *** ***.********************  **.

229. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MN234185 (Mycobacterium phage Lemuria, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
ccgtccgccgccgccgccgccgccgccgccgttgccg	Protospacer
 . **** ***.*******************.  ***

230. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccggcgccgccgccggcgccgccgccggtggcg	Protospacer
*.* *******.******* ***********    **

231. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KY385384 (Mycobacterium phage SimranZ1, complete genome) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg-	CRISPR spacer
aaccccggcgcacccgccgccgccgccgccg-acccgc	Protospacer
. *.*******  ****************** ..*** 

232. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP015269 (Mycobacterium chimaera strain ZUERICH-2 plasmid unnamed 2, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccctcgaggctgacgccgcggccgccgccgcgtcag	Protospacer
*.*..**. **** ****** ************** *

233. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttgccgccgctgccgccgctgccgccgccattgccg	Protospacer
**. *** ************.*********..  ***

234. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttgccgccgctgccgccgctgccgccgccattgccg	Protospacer
**. *** ************.*********..  ***

235. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttgccgccgctgccgccgctgccgccgccattgccg	Protospacer
**. *** ************.*********..  ***

236. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttgccgccgctgccgccgctgccgccgccattgccg	Protospacer
**. *** ************.*********..  ***

237. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttgccgccgctgccgccgctgccgccgccattgccg	Protospacer
**. *** ************.*********..  ***

238. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttgccgccgctgccgccgctgccgccgccattgccg	Protospacer
**. *** ************.*********..  ***

239. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.784

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gttgccgccgctgccgccgctgccgccgccattgccg	Protospacer
**. *** ************.*********..  ***

240. spacer 62.1|3475680|29|NC_009523|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.724

ggcaaggcgaagcccgcctgcgcgggctg	CRISPR spacer
ttgtaggcgaagcccgcctgcgcggtgaa	Protospacer
    *********************   .

241. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.784

tatgggcgaccgccgt---ccgcgccgccgccgtcgatga	CRISPR spacer
---gcgccgccgccgcccgccgcgccgccgccgtcgatca	Protospacer
   * ** .******.   ******************* *

242. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.784

-tatgggcgaccgccgtccgcgccgccgccgtcgatga	CRISPR spacer
agataggccg-cgccgaacgcgccgccgccgtcgatgc	Protospacer
  **.*** . *****  ******************* 

243. spacer 70.41|3784905|36|NC_009523|CRT,CRISPRCasFinder matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 8, identity: 0.778

cctcgccatgcgccgcgccgacgggcagg-gcatgct	CRISPR spacer
cgccgccatgcgccgcgctgacgggcgggcgggcgc-	Protospacer
* .***************.*******.** * ..** 

244. spacer 71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018236 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed8) position: , mismatch: 8, identity: 0.75

ttcggcgacgcgccgacattggcggagtggaa	CRISPR spacer
ttcgtcgacgagccgacattggcggtgatctg	Protospacer
**** ***** ************** *    .

245. spacer 71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.75

ttcggcgacgcgccgacattggcggagtggaa	CRISPR spacer
ttcgtcgacgagccgacattggcggtgatctc	Protospacer
**** ***** ************** *     

246. spacer 71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

ttcggcgacgcgccgacattggcggagtggaa	CRISPR spacer
ttcggcggcgagccgacattggcgagatcggg	Protospacer
*******.** *************...* *..

247. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

248. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

249. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

250. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

251. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

252. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

253. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

254. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

255. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

256. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

257. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

258. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

259. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgatgccggtgcgcgcgatgcgccggacgcg	Protospacer
*.    ****************** **.***.

260. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcacggacggtgagcgcgatgcacagggcgag	Protospacer
*. **  ***** *********.******* .

261. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
ccctgccgggtgcgcgggatgcgcagggtgaa	Protospacer
 ...*** ******** ***********.* *

262. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gtcccgtcggtgagcgcgatgcgcaggccgag	Protospacer
**.*  .***** ************** ** .

263. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.75

gttcgcccggtgcgcgcgatgcgcagggcgca-	CRISPR spacer
ccgcggccggtgcgcgccatgcgca-gccgctt	Protospacer
 . ** *********** ******* * ***  

264. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to MH399787 (Mycobacterium phage Rubeelu, complete genome) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc----	CRISPR spacer
cggcggcagcagcggcggcgcgaca----ccgaag	Protospacer
 . *********** **********    **    

265. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NC_021061 (Mycobacterium phage Butters, complete genome) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc----	CRISPR spacer
cggcggcagcagcggcggcgcgaca----ccgaag	Protospacer
 . *********** **********    **    

266. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcggcaacggcgtcggcgcgaccttgatg	Protospacer
********.*.*************  *  . 

267. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
cacgggcagcagcgtcggcgcgaatatcgat	Protospacer
 *. *******************  ***  .

268. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to HM152765 (Mycobacterium phage Island3, complete genome) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ccacggcagcagcggcgccgcgacaaccaca	Protospacer
   *********** ** ********.* * 

269. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to KP027201 (Mycobacterium phage Sbash, complete genome) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ccacggcagcagcggcgccgcgacaaccaca	Protospacer
   *********** ** ********.* * 

270. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NC_004683 (Mycobacterium phage Che9c, complete genome) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ccacggcagcagcggcgccgcgacaaccaca	Protospacer
   *********** ** ********.* * 

271. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NC_011291 (Mycobacterium phage Brujita, complete genome) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ccacggcagcagcggcgccgcgacaaccaca	Protospacer
   *********** ** ********.* * 

272. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to AY129333 (Mycobacterium virus Che9c, complete genome) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ccacggcagcagcggcgccgcgacaaccaca	Protospacer
   *********** ** ********.* * 

273. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gaccggcagcagcgtcagcgcgatgccggcc	Protospacer
**.*************.******.. .  **

274. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gaccggcagcagcgtcagcgcgatgccggcc	Protospacer
**.*************.******.. .  **

275. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcggctgcagcgtcggggcgaggaaggtc	Protospacer
******* ********** **** .*   .*

276. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
cgtgcgcagcagcgccggcgcgaaaatcagc	Protospacer
 .*  *********.******** ****  *

277. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcggctgcagcgtcggggcgaggaaggtc	Protospacer
******* ********** **** .*   .*

278. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to MN234219 (Mycobacterium phage Mercurio, complete genome) position: , mismatch: 8, identity: 0.742

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcggcagcagcggcagcgcgagcacgtcg	Protospacer
************** *.******  *. .* 

279. spacer 78.6|4198784|30|NC_009523|CRT matches to MN131137 (Aeromonas phage D6, complete genome) position: , mismatch: 8, identity: 0.733

cgacggcgtcagggtattcgtcggcgtgtt	CRISPR spacer
cagaggcgttcgggtattcgtcggcgtaga	Protospacer
*.. *****. ****************.  

280. spacer 78.6|4198784|30|NC_009523|CRT matches to MK838116 (Aeromonas phage LAh10, complete genome) position: , mismatch: 8, identity: 0.733

cgacggcgtcagggtattcgtcggcgtgtt	CRISPR spacer
cagaggcgttcgggtattcgtcggcgtaga	Protospacer
*.. *****. ****************.  

281. spacer 78.6|4198784|30|NC_009523|CRT matches to MN102098 (Aeromonas phage D3, complete genome) position: , mismatch: 8, identity: 0.733

cgacggcgtcagggtattcgtcggcgtgtt	CRISPR spacer
cagaggcatccgggtattcgtcggcgtaga	Protospacer
*.. ***.** ****************.  

282. spacer 103.4|5434485|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016620 (Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.771

cgctggtcgaatgcgagacgctcgcgttcgacatc	CRISPR spacer
ggctggtcgaatccgagacgcgcgcgtagcgcagc	Protospacer
 *********** ******** *****   .** *

283. spacer 103.14|5435162|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

gcggcgtaaacgctgcggcgttgatgtcgagtgc	CRISPR spacer
gcggcgtaagcgctgcggcgctgaagcggctggc	Protospacer
*********.**********.*** *. *   **

284. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 8, identity: 0.742

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtttg	Protospacer
 . *.**** ********.********** .

285. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 8, identity: 0.742

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtttg	Protospacer
 . *.**** ********.********** .

286. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 8, identity: 0.742

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtttg	Protospacer
 . *.**** ********.********** .

287. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 8, identity: 0.742

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtttg	Protospacer
 . *.**** ********.********** .

288. spacer 103.17|5435360|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.765

ttcgctggctgcgcacgcggcgcggggcgttgcg	CRISPR spacer
agcccaggtcgcgcacgaggtgcggggcgttgcg	Protospacer
  * * **..******* **.*************

289. spacer 103.17|5435360|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 8, identity: 0.765

ttcgctggctgcgcacgcggcgcggggcgttgcg	CRISPR spacer
agcccaggtcgcgcacgaggtgcggggcgttgcg	Protospacer
  * * **..******* **.*************

290. spacer 103.23|5435760|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MN119376 (Streptomyces phage Geostin, complete genome) position: , mismatch: 8, identity: 0.765

cgagtcgctacatcgcggtgttcaacggcataat	CRISPR spacer
agaggtacttcatcgcggtgtccaacggcatcaa	Protospacer
 *** ..** ***********.********* * 

291. spacer 103.23|5435760|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MH155868 (Streptomyces phage FlowerPower, complete genome) position: , mismatch: 8, identity: 0.765

cgagtcgctacatcgcggtgttcaacggcataat	CRISPR spacer
agaggtacttcatcgcggtgtccaacggcatcaa	Protospacer
 *** ..** ***********.********* * 

292. spacer 103.23|5435760|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MN284894 (Streptomyces phage Fabian, complete genome) position: , mismatch: 8, identity: 0.765

cgagtcgctacatcgcggtgttcaacggcataat	CRISPR spacer
agaggtacttcatcgcggtgtccaacggcatcaa	Protospacer
 *** ..** ***********.********* * 

293. spacer 103.32|5436369|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 8, identity: 0.765

cggctggtcggtgcgcgacgggcggctggtctac	CRISPR spacer
gccccggctggagcgcggcgggcggctggtctac	Protospacer
   *.**..** *****.****************

294. spacer 103.39|5436839|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029987 (Sphingomonas sp. FARSPH plasmid p02, complete sequence) position: , mismatch: 8, identity: 0.765

cggcgtcggggatgacgacgcgcccgtcgtcatc	CRISPR spacer
cgcggatctggatcgcgacgcgcccgtcgtcatc	Protospacer
**  * .  **** .*******************

295. spacer 103.41|5436974|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

cgaccgcccggcgtcctcgttgtccaacgacca--	CRISPR spacer
ggcacgcccggcgtcgtcgttgtcgaac--ccggt	Protospacer
 *  *********** ******** ***  **.  

296. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046256 (Sphingobium sp. CAP-1 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.758

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
tatgcgatcgacattaaccgcatcgccgtcgcc	Protospacer
...    *******.******************

297. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046256 (Sphingobium sp. CAP-1 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.758

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
tatgcgatcgacattaaccgcatcgccgtcgcc	Protospacer
...    *******.******************

298. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022748 (Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
tatgcgatcgacattaaccgcatcgccgtcgcc	Protospacer
...    *******.******************

299. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022748 (Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
tatgcgatcgacattaaccgcatcgccgtcgcc	Protospacer
...    *******.******************

300. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016454 (Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence) position: , mismatch: 8, identity: 0.758

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
tatgcgatcgacattaaccgcatcgccgtcgcc	Protospacer
...    *******.******************

301. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016454 (Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence) position: , mismatch: 8, identity: 0.758

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
tatgcgatcgacattaaccgcatcgccgtcgcc	Protospacer
...    *******.******************

302. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 8, identity: 0.758

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
ttctggatcgacatcaaccgcaccgccgtcgtc	Protospacer
. *..  ***************.********.*

303. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 8, identity: 0.758

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
gaccatctcgtcgtcaaccgcatcgccgaccag	Protospacer
 .******** *.*************** *   

304. spacer 103.61|5438316|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_011604 (Salmonella enterica subsp. enterica serovar Westhampton plasmid pWES-1, complete sequence) position: , mismatch: 8, identity: 0.765

gcggatcgaggaaggcgcggagatcgcaatcacc	CRISPR spacer
gttgatcgaggccggcgcggagatcgccaccgac	Protospacer
*. ********  ************** *.*. *

305. spacer 103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP052389 (Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1) position: , mismatch: 8, identity: 0.771

cggtgatgtccggcgcggcgccggcggctatgctg-	CRISPR spacer
tggagatgtccggcgcgccgccggc-gtttcgcagc	Protospacer
.** ************* ******* *.* .** * 

306. spacer 103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MH719195 (Pseudomonas phage Ps59, complete genome) position: , mismatch: 8, identity: 0.771

cggtgatgtccggcgcggcgccggcggctatgctg	CRISPR spacer
ccgccaggtccggctcggcgccagcggctatggcg	Protospacer
* *. * ******* *******.********* .*

307. spacer 103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to JX495043 (Pseudomonas phage JBD67, partial genome) position: , mismatch: 8, identity: 0.771

cggtgatgtccggcgcggcgccggcggctatgctg	CRISPR spacer
ccgccaggtccggctcggcgccagcggctatggcg	Protospacer
* *. * ******* *******.********* .*

308. spacer 103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MH719190 (Pseudomonas phage H71, complete genome) position: , mismatch: 8, identity: 0.771

cggtgatgtccggcgcggcgccggcggctatgctg	CRISPR spacer
ccgccaggtccggctcggcgccagcggctatggcg	Protospacer
* *. * ******* *******.********* .*

309. spacer 103.71|5438989|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_021910 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetNIM1c, complete sequence) position: , mismatch: 8, identity: 0.771

cgtgc-tgctccgcgccgcgcaggcgtcaacgcgcg	CRISPR spacer
-gtccgcgatccgcgcctcgcaggcgccaacgcgga	Protospacer
 ** * .* ******** ********.******* .

310. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.765

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
ggtgcgggtcaaccgctacaccggcgaagtccac	Protospacer
* *** ********** **********..*  * 

311. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP044079 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
gctgctggtcgacggcgacaccggctatggcgag	Protospacer
**********.** *********** * .  **.

312. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 8, identity: 0.765

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
gctgctggtcgacggcgacaccggctatggcgag	Protospacer
**********.** *********** * .  **.

313. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP020443 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.765

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
gctgctggtcgacggcgacaccggctatggcgag	Protospacer
**********.** *********** * .  **.

314. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NC_016972 (Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2, complete sequence) position: , mismatch: 8, identity: 0.765

gctgc-tggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
-ctatgtcctcaacctggacaccggcgagatggac	Protospacer
 **.. *  ******  ***************** 

315. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

cggcgcgctcagcagcagcaccgccagcgttgcga-	CRISPR spacer
gagagcggtcagcagcagcgccgccagcg-agcgtc	Protospacer
 .* *** ***********.*********  ***  

316. spacer 103.99|5440816|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010858 (Marinovum algicola DG 898 plasmid pMaD3) position: , mismatch: 8, identity: 0.765

tcagcggcaacaggttcatcaggttcgggggggg	CRISPR spacer
tcagcggcaacaggttcaccaggatctcgcagcc	Protospacer
******************.**** **  * .*  

317. spacer 3.1|328389|31|NC_009523|CRISPRCasFinder matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 9, identity: 0.71

gtaggggcgcagcactgctgcgaccagacgg	CRISPR spacer
gaaggcgcgcagcacggctgcgacccccata	Protospacer
* *** ********* *********     .

318. spacer 8.2|797038|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP049605 (Klebsiella pneumoniae strain Kp8701 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgcctggcgcgatcgtgcacactgcggaaa	CRISPR spacer
gccgccgggcgcgatcgtgcgcactgaccgac	Protospacer
  **** *************.*****   .* 

319. spacer 8.2|797038|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP025212 (Klebsiella pneumoniae strain HZW25 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgcctggcgcgatcgtgcacactgcggaaa	CRISPR spacer
gccgccgggcgcgatcgtgcgcactgaccgac	Protospacer
  **** *************.*****   .* 

320. spacer 8.2|797038|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP031809 (Klebsiella pneumoniae strain INF206-sc-2280074 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgcctggcgcgatcgtgcacactgcggaaa	CRISPR spacer
gccgccgggcgcgatcgtgcgcactgaccgac	Protospacer
  **** *************.*****   .* 

321. spacer 8.2|797038|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP041936 (Klebsiella pneumoniae strain KP14003 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgcctggcgcgatcgtgcacactgcggaaa	CRISPR spacer
gccgccgggcgcgatcgtgcgcactgaccgac	Protospacer
  **** *************.*****   .* 

322. spacer 8.2|797038|32|NC_009523|CRISPRCasFinder,CRT matches to NC_019390 (Klebsiella pneumoniae plasmid pKPN_CZ, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgcctggcgcgatcgtgcacactgcggaaa	CRISPR spacer
gccgccgggcgcgatcgtgcgcactgaccgac	Protospacer
  **** *************.*****   .* 

323. spacer 8.2|797038|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgcctggcgcgatcgtgcacactgcggaaa	CRISPR spacer
cgcgcccggcgcgttcgtgcacaacgtcgcgc	Protospacer
******.****** ********* .*. * . 

324. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to LR606149 (Rhizobium sp. Q54 genome assembly, plasmid: 6) position: , mismatch: 9, identity: 0.719

atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
atgctgccgctggagcgcggcgaccaacccgc	Protospacer
**   .****.*******.**********   

325. spacer 8.11|797587|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 9, identity: 0.719

atcgaaccgccggagcgcagcgaccaaccgcg	CRISPR spacer
ttcgaaccgccggagcccggcgacttcaccgg	Protospacer
 *************** *.*****.   *  *

326. spacer 8.18|798013|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gctgcgagtttggcgctggaggtgttcgctta	CRISPR spacer
atcgtgagtctggcgctggacgtgttcgcgcc	Protospacer
...*.****.********** ******** . 

327. spacer 36.1|1891995|35|NC_009523|CRISPRCasFinder matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 9, identity: 0.743

cttttggataggcgcgggcgcgcggtgctggcggg	CRISPR spacer
gctctgtccgggcgcgagcgcgcggtgctggaggg	Protospacer
 .*.**  ..******.************** ***

328. spacer 43.24|2318434|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015237 (Rhodococcus fascians D188 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.757

atggacg-gatcggcgcggtactcgtggacgagctgca	CRISPR spacer
-cgaccgtgttcggcgcggtactcggcgacgagctggt	Protospacer
 .*. ** * ***************  *********  

329. spacer 43.30|2318873|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 9, identity: 0.743

cgcttccgccttcttgattaccgcgcccgcaatcg	CRISPR spacer
ggcttccgcctccttcattaccgcgctgcagagcg	Protospacer
 **********.*** **********.   .* **

330. spacer 44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.757

gcgaaggcgtcgatgcgcgtgtcgatcacgc---cgaacc	CRISPR spacer
ttgttggcgacgatgcgcgtgtcgatctcgcggtcga---	Protospacer
 .*  **** ***************** ***   ***   

331. spacer 44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.757

gcgaaggcgtcgatgcgcgtgtcgatcacgc---cgaacc	CRISPR spacer
ttgttggcgacgatgcgcgtgtcgatctcgcggtcga---	Protospacer
 .*  **** ***************** ***   ***   

332. spacer 44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.757

gcgaaggcgtcgatgcgcgtgtcgatcacgc---cgaacc	CRISPR spacer
ttgttggcgacgatgcgcgtgtcgatctcgcggtcga---	Protospacer
 .*  **** ***************** ***   ***   

333. spacer 44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.757

gcgaaggcgtcgatgcgcgtgtcgatcacgc---cgaacc	CRISPR spacer
ttgttggcgacgatgcgcgtgtcgatctcgcgatcga---	Protospacer
 .*  **** ***************** ***   ***   

334. spacer 44.10|2322418|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.757

gcgaaggcgtcgatgcgcgtgtcgatcacgc---cgaacc	CRISPR spacer
ttgttggcgacgatgcgcgtgtcgatctcgcggtcga---	Protospacer
 .*  **** ***************** ***   ***   

335. spacer 44.12|2322564|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_049851 (Burkholderia phage BcepSauron, complete genome) position: , mismatch: 9, identity: 0.743

tcacgaggtcgaagaagatgaagaagtacaccatc	CRISPR spacer
gaaggatgtcgaagaagatgaagaaggacgttatg	Protospacer
  * ** ******************* **...** 

336. spacer 44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016292 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagttggcgctgccggtgctggagcaagatcaag	CRISPR spacer
cggatgcggggctgccggtgctggagcacgatctgc	Protospacer
* **  .** ****************** **** . 

337. spacer 44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016292 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagttggcgctgccggtgctggagcaagatcaag	CRISPR spacer
cggatgcggggctgccggtgctggagcacgatctgc	Protospacer
* **  .** ****************** **** . 

338. spacer 44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016292 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagttggcgctgccggtgctggagcaagatcaag	CRISPR spacer
cggatgcggggctgccggtgctggagcacgatctgc	Protospacer
* **  .** ****************** **** . 

339. spacer 44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016292 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagttggcgctgccggtgctggagcaagatcaag	CRISPR spacer
cggatgcggggctgccggtgctggagcacgatctgc	Protospacer
* **  .** ****************** **** . 

340. spacer 44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018234 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagttggcgctgccggtgctggagcaagatcaag	CRISPR spacer
cggatgcggggctgccggtgctggagcacgatctgc	Protospacer
* **  .** ****************** **** . 

341. spacer 44.29|2323810|36|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018234 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagttggcgctgccggtgctggagcaagatcaag	CRISPR spacer
cggatgcggggctgccggtgctggagcacgatctgc	Protospacer
* **  .** ****************** **** . 

342. spacer 46.1|2382967|31|NC_009523|CRISPRCasFinder matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

tcgctcaggtcggcgtaggttttgagccaaa	CRISPR spacer
gggtattggtcggcgtaggttttgacccagg	Protospacer
  *. . ****************** ***..

343. spacer 49.24|2429129|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.75

acgcaccatcagcgccacccgccgctcgtccatccc	CRISPR spacer
gccggccagcagcgccacccgccggtcgtccaccaa	Protospacer
.*  .*** *************** *******.*  

344. spacer 49.29|2429496|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048642 (Streptomyces aureoverticillatus strain HN6 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

catcaacgcggcggtgacgctgtggttgtcgcccc	CRISPR spacer
gatcaacgaggcggtggcgctgtggtcgaacgccg	Protospacer
 ******* *******.*********.*    ** 

345. spacer 49.29|2429496|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 9, identity: 0.743

catcaacgcggcggtgacgctgtggttgtcgcccc	CRISPR spacer
gatgccggcgccggtggcgctgtggttgtcgcact	Protospacer
 **    *** *****.*************** *.

346. spacer 49.80|2433257|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 9, identity: 0.75

gtaagcgagcggcggcgcggttggtggcgcgccgga	CRISPR spacer
gactggccgtggcggcgcgggtggtggcgcaccgga	Protospacer
*   *   *.********** *********.*****

347. spacer 49.103|2434953|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NC_030916 (Tsukamurella phage TPA4, complete genome) position: , mismatch: 9, identity: 0.743

gttggtggcgctgctgctccgcgacccagccgttc	CRISPR spacer
ctacctcgcgctgctgctccgcgaccacgccgtcg	Protospacer
 *   * *******************  *****. 

348. spacer 49.121|2436289|36|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011590 (Enterobacter asburiae strain CAV1043 plasmid pCAV1043-97, complete sequence) position: , mismatch: 9, identity: 0.75

tgatcatccacaccggcaacggtctgatgccgatgt	CRISPR spacer
tgatcatccccacccgcaacggtctggcgcatctca	Protospacer
********* **** ***********..**   *  

349. spacer 57.1|3143490|32|NC_009523|CRISPRCasFinder matches to NC_048743 (Mycobacterium phage DrLupo, complete genome) position: , mismatch: 9, identity: 0.719

gggtcgcttggatcaagcgcgctgagcgtaac----	CRISPR spacer
aggtcgcctggatcaagcgcg----gtgttgccgga	Protospacer
.******.*************    *.** .*    

350. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NC_011982 (Agrobacterium vitis S4 plasmid pTiS4, complete sequence) position: , mismatch: 9, identity: 0.743

ttcgcaccacgcccgccacacggcggcgattccgg	CRISPR spacer
ggcgttgatcgccagccacacggcggcgattccga	Protospacer
  **.    **** ********************.

351. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000032 (Agrobacterium fabrum strain CFBP2788 plasmid pTi_CFBP2788, complete sequence) position: , mismatch: 9, identity: 0.743

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--agcattgatcgccagccacacggcggcgatgccga	Protospacer
   ***...  **** **************** ***.

352. spacer 58.26|3151800|35|NC_009523|CRISPRCasFinder matches to NZ_KY000032 (Agrobacterium fabrum strain CFBP2788 plasmid pTi_CFBP2788, complete sequence) position: , mismatch: 9, identity: 0.743

ttcgcacca--cgcccgccacacggcggcgattccgg	CRISPR spacer
--agcattgatcgccagccacacggcggcgatgccga	Protospacer
   ***...  **** **************** ***.

353. spacer 58.30|3152095|39|NC_009523|CRISPRCasFinder matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.769

gacctggcgccgccggacgcggcgggtgcggcggacgcc	CRISPR spacer
gccgcgaagacgtcggacgcggcggatgcggcggacgcg	Protospacer
* * .*. * **.************.************ 

354. spacer 58.86|3156267|35|NC_009523|CRISPRCasFinder matches to KU726251 (Enterobacteria phage SEGD1, complete genome) position: , mismatch: 9, identity: 0.743

acgatgtcgcgggaggacctcgcccgatccagatt	CRISPR spacer
atgatgtcgcggtaggacgtcgcccgataaggtac	Protospacer
*.********** ***** *********  .*  .

355. spacer 58.86|3156267|35|NC_009523|CRISPRCasFinder matches to MT679221 (Proteus phage 7, complete genome) position: , mismatch: 9, identity: 0.743

acgatgtcgcgggaggacctcgcccgatccagatt	CRISPR spacer
atgatgtcgcggtaggacgtcgcccgataaggtac	Protospacer
*.********** ***** *********  .*  .

356. spacer 58.86|3156267|35|NC_009523|CRISPRCasFinder matches to NC_027402 (Salmonella phage SPN3US, complete genome) position: , mismatch: 9, identity: 0.743

acgatgtcgcgggaggacctcgcccgatccagatt	CRISPR spacer
atgatgtcgcggtaggacgtcgcccgataaggtac	Protospacer
*.********** ***** *********  .*  .

357. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
ccggccggcgcagccgccgccgccgccgccgccagca	Protospacer
 .  ******* ********************   *.

358. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

359. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

360. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg------	CRISPR spacer
------ggcgccgccgccgccgccgccgccgccgccggccgac	Protospacer
      *****.********************  ***      

361. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---ggtggcgccgccgccgccgccgccgccgccgccggcc	Protospacer
     .*****.********************  ***   

362. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cgtcccgccgccgccgccgccgccgccgccgccgtcg	Protospacer
  ..*** ***.********************  .**

363. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cccgccgccgccgccgccgccgccgccgccgtcggtg	Protospacer
   .*** ***.********************  .**   

364. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgtcccta	Protospacer
*.* *** ***.*******************. .*..

365. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

366. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

367. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

368. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

369. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

370. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

371. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

372. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

373. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

374. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

375. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

376. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

377. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

378. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

379. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

380. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

381. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

382. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
*..********.**** ***************   . 

383. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
tccgccggcgctgccgccaccgccgctgccgcccgag	Protospacer
 .* **************.*******.***** .  *

384. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---accgccgccgccgccgccgccgccgccgccaccagcg	Protospacer
    *** ***.********************  **.   

385. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
tccgccggcgctgccgccaccgccgctgccgcccgag	Protospacer
 .* **************.*******.***** .  *

386. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---accgccgccgccgccgccgccgccgccgccaccagcg	Protospacer
    *** ***.********************  **.   

387. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
tccgccggcgctgccgccaccgccgctgccgcccgag	Protospacer
 .* **************.*******.***** .  *

388. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
attgccgccgccgccgccgccgccgccgccgcccgag	Protospacer
.*. *** ***.******************** .  *

389. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
atggcggccattgccgccgccgccgccgccgccgccg	Protospacer
.*  * * *..*********************  ***

390. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP005085 (Sphingobium sp. TKS plasmid pTK1, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
tcccccgtcgccgccgccgccgccgccgccgccaatg	Protospacer
 .*.*** ***.********************   .*

391. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
tccgccggcgctgccgccaccgccgctgccgcccgag	Protospacer
 .* **************.*******.***** .  *

392. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---accgccgccgccgccgccgccgccgccgccaccagcg	Protospacer
    *** ***.********************  **.   

393. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 9, identity: 0.757

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcgcgcgccgccgccgccgccgccgccgccgcagcgt---	Protospacer
     * *** ***.***************** ****   

394. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH746817 (Achromobacter phage vB_Ade_ART, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
ctaaccgccgccgccgccgccgccgccgccgccgtca	Protospacer
 *  *** ***.********************  .*.

395. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MT241605 (Achromobacter phage AMA1, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
actgccgccgccgccgccgccgccgccgccgccgctg	Protospacer
... *** ***.********************  *.*

396. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MT241605 (Achromobacter phage AMA1, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
tttgcccttactgccgccgccgccgccgccgccgccg	Protospacer
 *. **  ..**********************  ***

397. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH479916 (Mycobacterium phage GeneCoco, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accgccgccgccgccgccgccgccgccgccaagctcg	Protospacer
..* *** ***.******************. *..**

398. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH697582 (Mycobacterium phage Ejimix, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
caaccctgcgcggccgccgccgccgccgccgacgccg	Protospacer
   .** **** *******************   ***

399. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK967402 (Mycobacterium phage NihilNomen, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
caaccctgcgcggccgccgccgccgccgccgacgccg	Protospacer
   .** **** *******************   ***

400. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KM363596 (Mycobacteriophage Omnicron, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
tccgccgccgcggccgccgccgccgccgccgaggaca	Protospacer
 .* *** *** ******************* *  *.

401. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK524521 (Mycobacterium phage Schatzie, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
caaccctgcgcggccgccgccgccgccgccgacgccg	Protospacer
   .** **** *******************   ***

402. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MN183286 (Mycobacteriophage Yeet, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
caaccctgcgcggccgccgccgccgccgccgacgccg	Protospacer
   .** **** *******************   ***

403. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK327944 (Escherichia phage vB_EcoM_G2540-3, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
acccctgttgccgccgccgccgccgccgccgcctcca	Protospacer
..*.*.* .**.******************** ***.

404. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK524504 (Mycobacterium phage Hughesyang, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
caaccctgcgcggccgccgccgccgccgccgacgccg	Protospacer
   .** **** *******************   ***

405. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_031109 (Gordonia phage Jumbo, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgc--gtccg	CRISPR spacer
aatctcggcgctgccggtgccgccgccgccgccggtc--	Protospacer
. ...*********** .**************  ***  

406. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH727546 (Mycobacterium phage Eaglehorse, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcgaccgccgccgccgccgccgccgccgcctgtaccg	Protospacer
*.  *** ***.******************    ***

407. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_019959 (Mycobacterium sp. JS623 plasmid pMYCSM03, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
ctcaacggcgctgccgccgcggcctccgccg---tcgaac	Protospacer
 **  *************** *** ******   .**   

408. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cacgctggtgctgccaccgccgccgccgccgcccccc	Protospacer
  * *.**.******.**************** .** 

409. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MT740744 (Ralstonia phage Jenny, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cgccgccgcgccgccgcggccgccgccgccgcgctcg	Protospacer
  *. * ****.***** ***************..**

410. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK279858 (Mycobacterium phage JakeO, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
aacaccgccgccgccgccgccgccgccgccaagctcg	Protospacer
. * *** ***.******************. *..**

411. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_028681 (Mycobacterium phage Pops, complete genome) position: , mismatch: 9, identity: 0.757

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accgcccccgccgccgccgccgccgccgccgggtgcc	Protospacer
..* **  ***.******************* ** * 

412. spacer 58.105|3157675|37|NC_009523|CRISPRCasFinder matches to NZ_CP012186 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence) position: , mismatch: 9, identity: 0.757

gaaaccccg-----cccgccttcggcggggcggggctgacac	CRISPR spacer
-----cccggtggacccgccttcggcggggtgggcctgacgg	Protospacer
     ****     ****************.*** *****. 

413. spacer 58.105|3157675|37|NC_009523|CRISPRCasFinder matches to NZ_CP010991 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-2, complete sequence) position: , mismatch: 9, identity: 0.757

gaaaccccg-----cccgccttcggcggggcggggctgacac	CRISPR spacer
-----cccggtggacccgccttcggcggggtgggcctgacgg	Protospacer
     ****     ****************.*** *****. 

414. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MH727555 (Mycobacterium phage Mulan, complete genome) position: , mismatch: 9, identity: 0.775

gacgtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---gcccccgccgccgccgccgccgccgccgccgccgccgggt	Protospacer
   *.*.*** ***.********************  ***   

415. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MH371114 (Mycobacterium phage Childish, complete genome) position: , mismatch: 9, identity: 0.775

gacgtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---gcccccgccgccgccgccgccgccgccgccgccgccgggt	Protospacer
   *.*.*** ***.********************  ***   

416. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MK112553 (Mycobacterium Phage Squiggle, complete genome) position: , mismatch: 9, identity: 0.775

gacgtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---gcccccgccgccgccgccgccgccgccgccgccgccgggt	Protospacer
   *.*.*** ***.********************  ***   

417. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.775

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccaccaccgccgccgccgccgccgccgccgccgccacca	Protospacer
* *..* *** ***.********************  **.

418. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 9, identity: 0.775

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccaccaccgccgccgccgccgccgccgccgccgccacca	Protospacer
* *..* *** ***.********************  **.

419. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.775

gacgtctccggcgctgccgccgccgccgccgccg--cgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgatcgac--	Protospacer
* .*..********.**** **************  ** *  

420. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 9, identity: 0.775

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccaccaccgccgccgccgccgccgccgccgccgccacca	Protospacer
* *..* *** ***.********************  **.

421. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MN234185 (Mycobacterium phage Lemuria, complete genome) position: , mismatch: 9, identity: 0.775

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gagccgtccgccgccgccgccgccgccgccgccgttgccg	Protospacer
**  . **** ***.*******************.  ***

422. spacer 70.3|3782083|35|NC_009523|CRT,CRISPRCasFinder matches to NC_031059 (Rhodovulum phage vB_RhkS_P1, complete genome) position: , mismatch: 9, identity: 0.743

gcttgcctggcgcaggcgccggacgacgcggacgt	CRISPR spacer
acacgcctggcgcaggcgctggacgatgccgcggc	Protospacer
.* .***************.******.** *  *.

423. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 9, identity: 0.757

-tatgggcgaccgccgtccgcgccgccgccgtcgatga	CRISPR spacer
ccgacagcg-ccgccgactgcgccgccgccgtcgatgt	Protospacer
 ..  .*** ****** *.****************** 

424. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 9, identity: 0.757

-tatgggcgaccgccgtccgcgccgccgccgtcgatga	CRISPR spacer
ccgacagcg-ccgccgactgcgccgccgccgtcgatgt	Protospacer
 ..  .*** ****** *.****************** 

425. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 9, identity: 0.757

-tatgggcgaccgccgtccgcgccgccgccgtcgatga	CRISPR spacer
ccgacagcg-ccgccgactgcgccgccgccgtcgatgt	Protospacer
 ..  .*** ****** *.****************** 

426. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.757

tatgggcgaccgccgtccgcgccgccgccgtcgatga-	CRISPR spacer
tgccggcttccgccgtccgcgccgccgccg-ggacgct	Protospacer
*.. ***  *********************  **.*  

427. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.757

tatgggcgaccgccgtccgcgccgccgccgtcgatga-	CRISPR spacer
tgccggcttccgccgtccgcgccgccgccg-ggacgct	Protospacer
*.. ***  *********************  **.*  

428. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.757

tatgggcgaccgccgtccgcgccgccgccgtcgatga-	CRISPR spacer
tgccggcttccgccgtccgcgccgccgccg-ggacgct	Protospacer
*.. ***  *********************  **.*  

429. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.757

tatgggcgac-----cgccgtccgcgccgccgccgtcgatga	CRISPR spacer
-----gcggcggcaaagccggccgcgccgccgccgacgatga	Protospacer
     ***.*      **** ************** ******

430. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

tatgggcgac-----cgccgtccgcgccgccgccgtcgatga	CRISPR spacer
-----gcggcgttgacgccgtccgcgccgtcgccatcgatgt	Protospacer
     ***.*     **************.****.****** 

431. spacer 70.33|3784306|38|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP010865 (Marinovum algicola DG 898 plasmid pMaD10, complete sequence) position: , mismatch: 9, identity: 0.763

cggcggcggcggcggcgcgccccctcccaccccctcga	CRISPR spacer
gggcggcggcagcggcgcgccccctgccctctccggca	Protospacer
 *********.************** ** .*.**   *

432. spacer 70.50|3785572|38|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP010865 (Marinovum algicola DG 898 plasmid pMaD10, complete sequence) position: , mismatch: 9, identity: 0.763

cggcggcggcggcggcgcgccccctcccaccccctcga	CRISPR spacer
gggcggcggcagcggcgcgccccctgccctctccggca	Protospacer
 *********.************** ** .*.**   *

433. spacer 71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042262 (Litoreibacter sp. LN3S51 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcggcgacgcgccgacattggcggagtggaa	CRISPR spacer
cgcggcgacgcgacaacattggcgggggctga	Protospacer
. ********** *.**********.*   .*

434. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cggcggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

435. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cgacggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

436. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cgacggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

437. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cggcggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

438. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cgacggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

439. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cgacggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

440. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cgacggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

441. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cgacggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

442. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cgacggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

443. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cgacggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

444. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cggcggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

445. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cggcggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

446. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cggcggccgctgcgcgcgatgcgcaggcccag	Protospacer
   ** *** ***************** *  .

447. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcgcgcccgatgggcgcgatgcgcagctgggg	Protospacer
*. ******.** *************   * .

448. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 9, identity: 0.719

gttcgcc-----cggtgcgcgcgatgcgcagggcgca	CRISPR spacer
-----ccggtgacggtgcgcgcgatgcgtatggcggc	Protospacer
     **     ****************.* ****  

449. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to JN880423 (Salisaeta icosahedral phage 1, complete genome) position: , mismatch: 9, identity: 0.719

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
gcagcgtcagtgcgcgcgctgcgcatggcgca	Protospacer
*.    .*.********* ****** ******

450. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcgtcagcagcgtcggcgcgcttgcgctt	Protospacer
***** **************** . .. *..

451. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
cgagaccagcagcgtcggcgcgagaatgccg	Protospacer
 .  . ***************** *** ** 

452. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to KF986246 (Mycobacterium phage MichelleMyBell, complete genome) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
cggcggcagcagcggcggcgcgacaccgacg	Protospacer
 . *********** ********** .  * 

453. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to MK524500 (Mycobacterium phage Kevin1, complete genome) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
cggcggcagcagcggcggcgcgacaccgacg	Protospacer
 . *********** ********** .  * 

454. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcgccagcagcgacggcgcgagcgcgcgg	Protospacer
***** ******** ********  .. *  

455. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ctgcggcagcagcgtcggcaccacaagactt	Protospacer
   ****************.* ****  *..

456. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ctgcggcagcagcgtcggcaccacaagactt	Protospacer
   ****************.* ****  *..

457. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ctgcggcagcagcgtcggcaccacaagactt	Protospacer
   ****************.* ****  *..

458. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NC_007765 (Rhizobium etli CFN 42 plasmid p42e, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ctgggtcagcagcatcagcgcgacaatccag	Protospacer
    * *******.**.************  

459. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ctgggtcagcagcatcagcgcgacaatccag	Protospacer
    * *******.**.************  

460. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP020909 (Rhizobium etli strain NXC12 plasmid pRetNXC12c, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ctgggtcagcagcatcagcgcgacaatccag	Protospacer
    * *******.**.************  

461. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NC_021908 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1d, complete sequence) position: , mismatch: 9, identity: 0.71

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
ctgggtcagcagcatcagcgcgacaatccag	Protospacer
    * *******.**.************  

462. spacer 75.1|4102897|33|NC_009523|CRISPRCasFinder matches to NZ_CP031959 (Phaeobacter sp. LSS9 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

gaggttggcgcagcgcgtcaatcgcagcctgcg	CRISPR spacer
cggcctccagcagcgcgtcaaactcagcctgcg	Protospacer
 .* .*   ************ * *********

463. spacer 75.1|4102897|33|NC_009523|CRISPRCasFinder matches to NC_018287 (Phaeobacter inhibens DSM 17395 plasmid pPGA1_78, complete sequence) position: , mismatch: 9, identity: 0.727

gaggttggcgcagcgcgtcaatcgcagcctgcg	CRISPR spacer
cggcctccagcagcgcgtcaaactcagcctgcg	Protospacer
 .* .*   ************ * *********

464. spacer 75.1|4102897|33|NC_009523|CRISPRCasFinder matches to NZ_CP031950 (Phaeobacter inhibens strain BS107 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

gaggttggcgcagcgcgtcaatcgcagcctgcg	CRISPR spacer
cggcctccagcagcgcgtcaaactcagcctgcg	Protospacer
 .* .*   ************ * *********

465. spacer 75.1|4102897|33|NC_009523|CRISPRCasFinder matches to NZ_CP010597 (Phaeobacter inhibens strain P10 plasmid pP10_b, complete sequence) position: , mismatch: 9, identity: 0.727

gaggttggcgcagcgcgtcaatcgcagcctgcg	CRISPR spacer
cggcctccagcagcgcgtcaaactcagcctgcg	Protospacer
 .* .*   ************ * *********

466. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to NZ_CP045122 (Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
ttgccagggcgaggcccgcccgcgcgacgccga	Protospacer
* **********.*******.*****.  .  *

467. spacer 103.4|5434485|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039924 (Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129a, complete sequence) position: , mismatch: 9, identity: 0.743

-----cgctggtcgaatgcgagacgctcgcgttcgacatc	CRISPR spacer
aatcccgcc-----aatgcgagacgctcgttttcgacatg	Protospacer
     ***.     ***************. ******** 

468. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

469. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

470. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

471. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

472. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

473. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

474. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

475. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

476. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

477. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

478. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

479. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

480. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

481. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

482. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020948 (Rhizobium sp. CIAT894 plasmid pRheCIAT894a, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

483. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

484. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

485. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

486. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

487. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

488. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

489. spacer 103.15|5435229|31|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 9, identity: 0.71

ccggtctctacaacgtgctgctggcggttga	CRISPR spacer
attgcctcttcaacgtgccgctggcggtctg	Protospacer
 . *.**** ********.*********. .

490. spacer 103.17|5435360|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 9, identity: 0.735

ttcgctggctgcgcacgcggcgcggggcgttgcg	CRISPR spacer
ttcgctggctccggacgcggcgcgttttctcgag	Protospacer
********** ** **********   . *.* *

491. spacer 103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to AY320035 (Bacteriophage VWB, complete genome) position: , mismatch: 9, identity: 0.727

ccggcgccccggtgtcggcatgcacgccgtaca	CRISPR spacer
cgaccccctcggcgtcggcatgcacgccgtcac	Protospacer
* . * **.***.*****************   

492. spacer 103.18|5435427|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_005345 (Streptomyces phage VWB, complete genome) position: , mismatch: 9, identity: 0.727

ccggcgccccggtgtcggcatgcacgccgtaca	CRISPR spacer
cgaccccctcggcgtcggcatgcacgccgtcac	Protospacer
* . * **.***.*****************   

493. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014310 (Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
tattggcccgctcacgacccgccgcgcctgcat	Protospacer
* .  .***********.*** *********  

494. spacer 103.22|5435694|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018829 (Asticcacaulis excentricus strain M6 plasmid pASEM-1, complete sequence) position: , mismatch: 9, identity: 0.727

ctgggattgtccgctgatcatcgatgaggtgca	CRISPR spacer
aggcgccactcccctgatcatcgatgaggcgca	Protospacer
  * * .  *** ****************.***

495. spacer 103.24|5435827|37|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040763 (Paracoccus sp. 2251 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.757

cggcgcggtgtcggggcggatcgacgcgctgctggtc	CRISPR spacer
ggtggcgtggtcggggcggatcgacgcgctggtcaac	Protospacer
 *  ***  ********************** * . *

496. spacer 103.31|5436303|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 9, identity: 0.727

ctcgtccatctcagcgccgcgcagtcgcgctgc	CRISPR spacer
ctcgacgatctcagcgccgcgcaggatcgtctg	Protospacer
**** * *****************   **..  

497. spacer 103.32|5436369|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022365 (Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence) position: , mismatch: 9, identity: 0.735

cggctggtcggtgcgcgacgggcggctggtctac	CRISPR spacer
caccgaccgggtgcgcgaccggcggctgttctac	Protospacer
*. * . . ********** ******** *****

498. spacer 103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 9, identity: 0.727

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
gaccgtgtcgcggcgacggcgttccgcgccgat	Protospacer
*    .* ************** ** ******.

499. spacer 103.39|5436839|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 9, identity: 0.735

cggcgtcggggatgacgacgcgcccgtcgtcatc	CRISPR spacer
catgatgggggaggacgacgcggccgtcgtcgac	Protospacer
*.  .* ***** ********* ********. *

500. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MT897910 (Mycobacterium phage VioletZ, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

501. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MN369759 (Mycobacterium phage Mithril, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

502. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MT818419 (Mycobacterium phage Lolalove, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

503. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MN428050 (Mycobacterium phage Apex, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

504. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MK524486 (Mycobacterium phage Waleliano, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

505. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MN234171 (Mycobacterium phage Magpie, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

506. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MH513970 (Mycobacterium phage Hangman, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

507. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KX589269 (Mycobacterium phage Fortunato, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

508. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MT639648 (Mycobacterium phage Heath, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

509. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_042035 (Mycobacterium phage Zemanar, complete sequence) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

510. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_022063 (Mycobacterium phage Phelemich, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
ggtcagcaggtacatgcaggtgtcgtcgccgggca	Protospacer
*.  * .  **** *** *****************

511. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KF024727 (Mycobacterium phage Reprobate, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
ggtcagcaggtacatgcaggtgtcgtcgccgggca	Protospacer
*.  * .  **** *** *****************

512. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to MT310870 (Mycobacterium phage RawrgerThat, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

513. spacer 103.40|5436906|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_028968 (Mycobacterium phage BrownCNA, complete genome) position: , mismatch: 9, identity: 0.743

gaagactttgtacttgctggtgtcgtcgccgggca	CRISPR spacer
caccagcacgtacatgcaggtgtcgtcgccgggca	Protospacer
 *  * . .**** *** *****************

514. spacer 103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 9, identity: 0.727

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
gaccgtgtcgcggcgacggcgttccgcgccgat	Protospacer
*    .* ************** ** ******.

515. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 9, identity: 0.727

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
tatggcgtcgacatcaaccccttcgccgtcgcc	Protospacer
... .. ************ * ***********

516. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020926 (Sphingobium yanoikuyae strain SHJ plasmid pSES220, complete sequence) position: , mismatch: 9, identity: 0.727

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
gatcatctcgtcgtcaaccgcatcgccgaccag	Protospacer
 ..******* *.*************** *   

517. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022747 (Sphingobium hydrophobicum strain C1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.727

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
gatcatctcgtcgtcaaccgcatcgccgaccag	Protospacer
 ..******* *.*************** *   

518. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 9, identity: 0.727

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
gagcgcaacgacttcaaccgcttcgccgtcgcc	Protospacer
 . *..  **** ******** ***********

519. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018666 (Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence) position: , mismatch: 9, identity: 0.727

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
gatcatctcgtcgtcaaccgcatcgccgaccag	Protospacer
 ..******* *.*************** *   

520. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053023 (Sphingobium yanoikuyae strain YC-XJ2 plasmid p-B-Sy, complete sequence) position: , mismatch: 9, identity: 0.727

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
gatcatctcgtcgtcaaccgcatcgccgaccag	Protospacer
 ..******* *.*************** *   

521. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
gacgatctcgacatccaccgcttcgccgagacg	Protospacer
 .* *********** ***** ******  .* 

522. spacer 103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031755 (Rhodobacter sphaeroides strain EBL0706 plasmid p.D, complete sequence) position: , mismatch: 9, identity: 0.743

cggtgatgtccggcgcggcgccggcggctatgctg	CRISPR spacer
ccatgatgtccggcgcgacgccgggggcgcagttc	Protospacer
* .**************.****** ***   *.* 

523. spacer 103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 9, identity: 0.735

gggacagggcggcagcggcgccgtcctgcttgtg	CRISPR spacer
cctccatggcggcagcggcgccgacctgctttat	Protospacer
    ** **************** *******   

524. spacer 103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.735

gggacagggcggcagcggcgccgtcctgcttgtg	CRISPR spacer
gctgctgggcggcagcggcgccgacctgctgcat	Protospacer
*  .* ***************** ******    

525. spacer 103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 9, identity: 0.735

gggacagggcggcagcggcgccgtcctgcttgtg	CRISPR spacer
tgcgcagggcggccgcggcgccgtcctgtggggt	Protospacer
 * .********* **************.  *  

526. spacer 103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 9, identity: 0.735

gggacagggcggcagcggcgccgtcctgcttgtg	CRISPR spacer
gatgccggacggcagcggcgccggcctgctggaa	Protospacer
*. .* **.************** ****** * .

527. spacer 103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026489 (Streptomyces sp. 604F plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

gggacagggcggcagcggcgccgtcctgcttgtg-	CRISPR spacer
tgcgtggggcgggtgcggcgccgtcctgc-tgtat	Protospacer
 * ...******  *************** ***. 

528. spacer 103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 9, identity: 0.735

gggacagggcggcagcggcgccgtcctgcttgtg	CRISPR spacer
cgaacatggcggcagcggcgacgtcctcgtgatc	Protospacer
 *.*** ************* ******  * .* 

529. spacer 103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009405 (Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p78K, complete sequence) position: , mismatch: 9, identity: 0.727

ccggggaccccgtgcgctgcggcgcggcgctgg	CRISPR spacer
ggccggacaccgcgcgctgcggcgcggcacggc	Protospacer
    **** ***.***************.* * 

530. spacer 103.74|5439192|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

cgcggtgcagccggaactgctccagcgtgcagcg	CRISPR spacer
tgtggcgcaggcggaactgctccagcgcggtggc	Protospacer
.*.**.**** ****************.*  *  

531. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
ccggttccgcaaccgcggcagcggcgagatggag	Protospacer
 * *.*   ********.** ************.

532. spacer 103.83|5439731|35|NC_009523|CRISPRCasFinder,CRT matches to JQ067093 (Pseudomonas phage PaMx74, partial genome) position: , mismatch: 9, identity: 0.743

cggcagcggcgctaacccctcggtcagcccgcgca	CRISPR spacer
cggcagcggcgacaacccctcggtcgtcgagctgc	Protospacer
*********** .************. *  **   

533. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP044989 (Deinococcus sp. AJ005 plasmid p380k, complete sequence) position: , mismatch: 9, identity: 0.743

cggcgcgctcagcagcagcaccgccagcgttgcga	CRISPR spacer
cagcgcgcccagcagcaccaccgccagcccgaagg	Protospacer
*.******.******** ********** . . *.

534. spacer 103.99|5440816|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022700 (Acetobacter tropicalis strain BDGP1 plasmid pAtBDGP1A, complete sequence) position: , mismatch: 9, identity: 0.735

tcagcggcaacaggttcatcaggttcgggggggg	CRISPR spacer
tcaggggcaacaggttcatgaggtgagacgaagc	Protospacer
**** ************** ****  *. *..* 

535. spacer 103.99|5440816|34|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

tcagcggcaacaggttcatcaggttcgggggggg	CRISPR spacer
tcagccgcaacagtttcatcaggtcgtggaaatg	Protospacer
***** ******* **********.  **... *

536. spacer 8.5|797222|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to MT613935 (Pseudomonas phage Persinger, complete genome) position: , mismatch: 10, identity: 0.688

ctgaccgctatcgacgtgctgatgattgcgca	CRISPR spacer
atgaccgccaccgacgtgctgatggcgctggg	Protospacer
 *******.*.*************..  .* .

537. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 10, identity: 0.688

ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gatcctgctatcgtcgcgctgctgattgccgt	Protospacer
    *.******* ******* *******   

538. spacer 8.7|797344|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 10, identity: 0.688

ctgaccgctatcgacgcgctgatgattgcgca	CRISPR spacer
gatcctgctatcgtcgcgctgctgattgccgt	Protospacer
    *.******* ******* *******   

539. spacer 36.1|1891995|35|NC_009523|CRISPRCasFinder matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 10, identity: 0.714

cttttggataggcgcgggcgcgcggtgctggcggg	CRISPR spacer
cgcgccgcccggcgcgggcgggcggggctggcggg	Protospacer
* . . * . ********** **** *********

540. spacer 36.1|1891995|35|NC_009523|CRISPRCasFinder matches to NZ_CP044080 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.714

cttttggataggcgcgggcgcgcggtgctggcggg	CRISPR spacer
cgcgccgcccggcgcgggcgggcggggctggcggg	Protospacer
* . . * . ********** **** *********

541. spacer 43.16|2317855|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

gatccaggcgggcgtcgaggcgcaactgcgcatca	CRISPR spacer
attgcgtgcgcgcgtcgagacgcaactgcgcagac	Protospacer
. * *. *** ********.************   

542. spacer 43.16|2317855|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.714

gatccaggcgggcgtcgaggcgcaactgcgcatca	CRISPR spacer
attgcgtgcgcgcgtcgagacgcaactgcgcagac	Protospacer
. * *. *** ********.************   

543. spacer 43.38|2319460|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_011892 (Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence) position: , mismatch: 10, identity: 0.714

gcacgcggacgaaggcgtgcgcagcacatcgaata	CRISPR spacer
ccccgcgggcgaaggcgtgcgcggcacaccaggcc	Protospacer
 * *****.*************.*****.*.... 

544. spacer 43.38|2319460|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_011892 (Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence) position: , mismatch: 10, identity: 0.714

gcacgcggacgaaggcgtgcgcagcacatcgaata	CRISPR spacer
ccccgcgggcgaaggcgtgcgcggcacaccaggcc	Protospacer
 * *****.*************.*****.*.... 

545. spacer 49.67|2432296|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 10, identity: 0.714

ggaaccccgccgacgccggcggggtttccggtcgt	CRISPR spacer
cggccggcgccgacgccggcgggggttcccgtgaa	Protospacer
 *. *  ***************** **** ** . 

546. spacer 49.67|2432296|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 10, identity: 0.714

ggaaccccgccgacgccggcggggtttccggtcgt	CRISPR spacer
cggccggcgccgacgccggcgggggttcccgtgaa	Protospacer
 *. *  ***************** **** ** . 

547. spacer 49.72|2432668|38|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NC_020275 (Mycobacterium intracellulare subsp. yongonense 05-1390 plasmid pMyong1, complete sequence) position: , mismatch: 10, identity: 0.737

tccgtctggttcgacgcggcgcgctgggctgtcgagtg	CRISPR spacer
cctcagcggttcgacgctgcgcgctgcgctgtcgcgcg	Protospacer
.*.   .********** ******** ******* *.*

548. spacer 49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.73

tctgcgccccagtcgtcgagcgccgcaagcagcgcgt	CRISPR spacer
cggaccgcccagtcgtcgagctccgcatgcagcgggg	Protospacer
.  .*  ************** ***** ****** * 

549. spacer 49.103|2434953|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 10, identity: 0.714

gttggtggcgctgctgctccgcgacccagccgttc	CRISPR spacer
aaacctggcgctgctgcgccgcgaccaagccggat	Protospacer
.    ************ ******** *****  .

550. spacer 58.30|3152095|39|NC_009523|CRISPRCasFinder matches to MN585976 (Mycobacterium phage Kanely, complete genome) position: , mismatch: 10, identity: 0.744

gacctggcgccgccggacgcggcgggtgcggcggacgcc	CRISPR spacer
cctccgggaccgcccgacgcggcgggtccggcggacgag	Protospacer
  .*.** .***** ************ *********  

551. spacer 58.42|3152988|37|NC_009523|CRISPRCasFinder matches to NZ_AP022611 (Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574) position: , mismatch: 10, identity: 0.73

gaacgacccggcgctcggcgtcgcgcgcgcgcctctc	CRISPR spacer
cgccgacccggcgctcgacgtcgcgcccgcctcaccg	Protospacer
 . **************.******** *** .* *. 

552. spacer 58.42|3152988|37|NC_009523|CRISPRCasFinder matches to NZ_AP022611 (Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574) position: , mismatch: 10, identity: 0.73

gaacgacccggcgctcggcgtcgcgcgcgcgcctctc	CRISPR spacer
cgccgacccggcgctcgacgtcgcgcccgcctcaccg	Protospacer
 . **************.******** *** .* *. 

553. spacer 58.58|3154179|35|NC_009523|CRISPRCasFinder matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

ttcgcccgcgcttccgcctcggc------ccgagcggccgc	CRISPR spacer
cccgcccgcgctgccgcctcggcgcgacaccgaac------	Protospacer
..********** **********      ****.*      

554. spacer 58.58|3154179|35|NC_009523|CRISPRCasFinder matches to NC_018452 (Burkholderia phage DC1, complete genome) position: , mismatch: 10, identity: 0.714

ttcgcccgcgcttccgcctcggcccgagcggccgc	CRISPR spacer
gtcttgatcgcttccgcctcggcgcgtgcggcctt	Protospacer
 ** .   *************** ** ****** .

555. spacer 58.73|3155299|36|NC_009523|CRISPRCasFinder matches to NZ_LR134447 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence) position: , mismatch: 10, identity: 0.722

gcgagggggagatcgggccgcgcagcgggcgcagat	CRISPR spacer
ttccggggaagatcgcgccgcgcagcgggctccact	Protospacer
 .  ****.****** ************** * . *

556. spacer 58.74|3155372|37|NC_009523|CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 10, identity: 0.73

gcgtcgtcctcctcgccccgcagccggtcgaggaggt	CRISPR spacer
atggcgagaccctcgccgcgcagccggtcgagcaggc	Protospacer
..* **   .******* ************** ***.

557. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MT241607 (Achromobacter phage AMA2, complete genome) position: , mismatch: 10, identity: 0.73

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgctatgt---	Protospacer
   *.* *** ***.*****************...**   

558. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK962627 (Achromobacter phage vB_AxyS_19-32_Axy06, complete genome) position: , mismatch: 10, identity: 0.73

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgtcgtgg---	Protospacer
   *.* *** ***.****************.**.*    

559. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_010335 (Caulobacter sp. K31 plasmid pCAUL01, complete sequence) position: , mismatch: 10, identity: 0.73

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---acctccgccgccgccgccgccgccgccgcccacggag	Protospacer
    **  ***.******************** . **   

560. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 10, identity: 0.73

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---accgccgccgccgccgccgccgccgccgcccatgccg	Protospacer
    *** ***.******************** . .*   

561. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.73

gtctccggcg-----ctgccgccgccgccgccgccgcgtccg	CRISPR spacer
-----tggcattgttctgccgccggcgctgccgccgcgtccc	Protospacer
     .***.     ********* ***.************ 

562. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP044989 (Deinococcus sp. AJ005 plasmid p380k, complete sequence) position: , mismatch: 10, identity: 0.73

gtctccg----gcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
----ctggagcgcgtggccgccgccgccgccgccgcgctgg	Protospacer
    *.*    ***. *********************.. *

563. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KX578071 (Mycobacterium phage Mana, complete genome) position: , mismatch: 10, identity: 0.73

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accgcccccgccgccgccgccgccgccgccgggtgtc	Protospacer
..* **  ***.******************* ** . 

564. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KU867907 (Mycobacterium phage Potter, complete genome) position: , mismatch: 10, identity: 0.73

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cccgcccccgccgccgccgccgccgccgccgggtgtc	Protospacer
 .* **  ***.******************* ** . 

565. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 10, identity: 0.75

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccattgccgccgccgccgccgccgccgccgccgcccgag	Protospacer
* *.*. *** ***.******************** .  *

566. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MT776813 (Mycobacterium phage Magic8, complete genome) position: , mismatch: 10, identity: 0.75

---gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cccaccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   . **.* *** ***.******************* **   

567. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MH576958 (Mycobacterium phage MichaelPhcott, complete genome) position: , mismatch: 10, identity: 0.75

---gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cccaccgccgccgccgccgccgccgccgccgccgccgggt---	Protospacer
   . **.* *** ***.******************* **   

568. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP046349 (Citrobacter portucalensis strain FDAARGOS_738 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.75

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cgcagttccggcgctaccgcagccgccgccgccgtgacgg	Protospacer
 .*. .*********.**** *************.* * *

569. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MH746817 (Achromobacter phage vB_Ade_ART, complete genome) position: , mismatch: 10, identity: 0.75

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gatctaaccgccgccgccgccgccgccgccgccgccgtca	Protospacer
**. *  *** ***.********************  .*.

570. spacer 70.3|3782083|35|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

gcttgcctggcgcaggcgccggacgacgcggacgt	CRISPR spacer
gatacgacagcgcaggcgccggtcgatgcggacgg	Protospacer
* *    ..************* ***.******* 

571. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.73

tatgggcgaccgccgtccgcgccgccgccgtcgatga	CRISPR spacer
cagagaaacgcgccgtccgcgccgccgccgacgttga	Protospacer
.* .*. .  ******************** ** ***

572. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP032327 (Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence) position: , mismatch: 10, identity: 0.73

tatgggcgaccgccgtccgcgccgccgccgtcgatga	CRISPR spacer
tcaagccgaccaccgtccgcgccgccgccatcgtgcc	Protospacer
*  .* *****.*****************.***    

573. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP032327 (Azospirillum brasilense strain MTCC4035 plasmid p6, complete sequence) position: , mismatch: 10, identity: 0.73

tatgggcgaccgccgtccgcgccgccgccgtcgatga	CRISPR spacer
tcaagccgaccaccgtccgcgccgccgccatcgtgcc	Protospacer
*  .* *****.*****************.***    

574. spacer 71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_018291 (Phaeobacter inhibens DSM 17395 plasmid pPGA1_262, complete sequence) position: , mismatch: 10, identity: 0.688

ttcggcgacgcgccgacattggcggagtggaa	CRISPR spacer
gtctgcgacgcggcgacattggcgccggtcgc	Protospacer
 ** ******** ***********  *   . 

575. spacer 71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010596 (Phaeobacter inhibens strain P10 plasmid pP10_a, complete sequence) position: , mismatch: 10, identity: 0.688

ttcggcgacgcgccgacattggcggagtggaa	CRISPR spacer
gtctgcgacgcggcgacattggcgccggtcgc	Protospacer
 ** ******** ***********  *   . 

576. spacer 71.4|3854389|32|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031949 (Phaeobacter inhibens strain BS107 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttcggcgacgcgccgacattggcggagtggaa	CRISPR spacer
gtctgcgacgcggcgacattggcgccggtcgc	Protospacer
 ** ******** ***********  *   . 

577. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
cttggcccggcgcgcgcgatgcgcctgcttgc	Protospacer
 ** ******.*************  * .   

578. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
tgcagtccgatgcgcccgatgcgcagggccgt	Protospacer
  . *.***.***** *************   

579. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
tgcagtccgatgcgcccgatgcgcagggccgt	Protospacer
  . *.***.***** *************   

580. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
tgcagtccgatgcgcccgatgcgcagggccgt	Protospacer
  . *.***.***** *************   

581. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 10, identity: 0.688

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
ggcacgacggcgcgcgcgaggcgcagggcgat	Protospacer
* .    ***.******** **********  

582. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
tcctgacccgtgcgcgcgatgcgcatggcaat	Protospacer
 ...* ** **************** ***.  

583. spacer 71.5|3854450|32|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP012886 (Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gttcgcccggtgcgcgcgatgcgcagggcgca	CRISPR spacer
tggatctcggcgcgcgcgatgcgcaggccgtc	Protospacer
     *.***.**************** **. 

584. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NC_014918 (Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence) position: , mismatch: 10, identity: 0.677

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcggcagcagcgccggcgggagctcttga	Protospacer
**************.***** **   ...  

585. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 10, identity: 0.677

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcggcagcagcgccggcgggagctcttga	Protospacer
**************.***** **   ...  

586. spacer 73.2|3969143|31|NC_009523|CRISPRCasFinder matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 10, identity: 0.677

gatcggcagcagcgtcggcgcgacaatcccc	CRISPR spacer
gatcggcagcagcgccggcgggagctcttga	Protospacer
**************.***** **   ...  

587. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.697

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
gggccagggcgaagcgcgcctgctcgcccgtcc	Protospacer
 .************* ******* **  *  . 

588. spacer 103.11|5434961|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 10, identity: 0.697

cttggcgtcgatgttgatcctgatataacgact	CRISPR spacer
attggcgtcgatcttgatccagataccgctcgc	Protospacer
 *********** ******* ****. .*   .

589. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

590. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

591. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

592. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042262 (Litoreibacter sp. LN3S51 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
accatgaccgctcacaacccggcgcgcctgctt	Protospacer
 .*... ********.*.*************. 

593. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

594. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

595. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

596. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

597. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

598. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

599. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

600. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

601. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

602. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

603. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

604. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

605. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

606. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

607. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

608. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

609. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

610. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

611. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

612. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

613. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

614. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

615. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

616. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

617. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

618. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

619. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

620. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

621. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

622. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

623. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

624. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

625. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

626. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

627. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

628. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

629. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

630. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

631. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

632. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

633. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

634. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

635. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

636. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

637. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

638. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

639. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

640. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

641. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

642. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

643. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

644. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

645. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

646. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

647. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

648. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

649. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

650. spacer 103.19|5435493|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 10, identity: 0.697

ttcgcacccgctcacgatccggcgcgcctgcca	CRISPR spacer
gatgacgccgatctcgatccggcgcgcctgctg	Protospacer
  .*   *** ** *****************..

651. spacer 103.26|5435964|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 10, identity: 0.714

aattccgccggtggcggatgtcgggctgatcgctt	CRISPR spacer
cgatccggcggaggcggatgtcgggctgaagattg	Protospacer
 . **** *** *****************  ..* 

652. spacer 103.32|5436369|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032350 (Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence) position: , mismatch: 10, identity: 0.706

cggctggtcggtgcgcgacgggcggctggtctac	CRISPR spacer
gggccggtcggtgcgcggcgggcggacaccgttc	Protospacer
 ***.************.******* .. . * *

653. spacer 103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
cgcatcggcgtggcgacggcggacctctacccg	Protospacer
   *******.********** *****  *   

654. spacer 103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_021780 (Salmonella phage FSL SP-088, complete genome) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

655. spacer 103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KC139515 (Salmonella phage FSL SP-124, complete genome) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

656. spacer 103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KR296689 (Salmonella phage 35, complete genome) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

657. spacer 103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KC139598 (Salmonella phage FSL SP-019 NinC protein gene, partial cds; hypothetical proteins, virion protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

658. spacer 103.34|5436502|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KM366098 (Salmonella phage BP12C, complete genome) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

659. spacer 103.47|5437378|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.706

gtcacatcagggtcgacatcgatgccgaggagag	CRISPR spacer
acatcgacaggctcgacatcgatgccgaggaact	Protospacer
..  *. **** *******************.  

660. spacer 103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
cgcatcggcgtggcgacggcggacctctacccg	Protospacer
   *******.********** *****  *   

661. spacer 103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_021780 (Salmonella phage FSL SP-088, complete genome) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

662. spacer 103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KC139515 (Salmonella phage FSL SP-124, complete genome) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

663. spacer 103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KR296689 (Salmonella phage 35, complete genome) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

664. spacer 103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KC139598 (Salmonella phage FSL SP-019 NinC protein gene, partial cds; hypothetical proteins, virion protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

665. spacer 103.50|5437576|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to KM366098 (Salmonella phage BP12C, complete genome) position: , mismatch: 10, identity: 0.697

gcaatcggcgcggcgacggcgtacctcgccgac	CRISPR spacer
atcgtcggcgcggccacggcgtaccacgtcatg	Protospacer
.. .********** ********** **.*.  

666. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_031048 (Enterobacter phage Arya, complete genome) position: , mismatch: 10, identity: 0.697

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
atatttgctgacatcaaccgcagcgccgttgcc	Protospacer
   . * ..************* ******.***

667. spacer 103.56|5437981|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 10, identity: 0.697

cgccatctcgacatcaaccgcatcgccgtcgcc	CRISPR spacer
attgatgtcggcatcaaccgcatcgccgcaccg	Protospacer
  . ** ***.*****************.  * 

668. spacer 103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 10, identity: 0.714

cggtgatgtccggcgcggcgccggcggctatgctg	CRISPR spacer
tggtgatgaccggcgcggcgccgccgttctcgacg	Protospacer
.******* ************** ** .. .* .*

669. spacer 103.66|5438653|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 10, identity: 0.714

cggtgatgtccggcgcggcgccggcggctatgctg	CRISPR spacer
tggtgatgaccggcgcggcgccgccgttctcgacg	Protospacer
.******* ************** ** .. .* .*

670. spacer 103.68|5438788|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024583 (Roseomonas sp. FDAARGOS_362 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

gggacagggcggcagcggcgccgtcctgcttgtg	CRISPR spacer
tgggcagggctgcagcggcgccgtcgcgaggacg	Protospacer
 **.****** ************** .*   ..*

671. spacer 103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 10, identity: 0.697

ccggggaccccgtgcgctgcggcgcggcgctgg	CRISPR spacer
tgcgggaccctgtgcgctgcggcgcagcaggtc	Protospacer
.  *******.**************.**.    

672. spacer 103.70|5438923|33|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 10, identity: 0.697

ccggggaccccgtgcgctgcggcgcggcgctgg	CRISPR spacer
tgcgggaccctgtgcgctgcggcgcagcaggtc	Protospacer
.  *******.**************.**.    

673. spacer 103.71|5438989|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134455 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 13, complete sequence) position: , mismatch: 10, identity: 0.714

cgtgctgctccgcgccgcgcaggcgtcaacgcgcg	CRISPR spacer
cgtgctgctcgacgccgcgcaggcgttcctcgacc	Protospacer
********** .**************.  .  .* 

674. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.706

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
cacgatggtcaacctcgacaccgccgagattacc	Protospacer
  .* ********* ******** ****** .  

675. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
cctggtggtcaaccgcgacacgggcgcccgctat	Protospacer
 *** **************** ****      * 

676. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 10, identity: 0.706

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
ggtcgcggtcgacggcgacaccggcgagatccgc	Protospacer
* *  .****.** ****************  . 

677. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NZ_AP014810 (Methylorubrum populi strain P-1M plasmid pMPPM01, complete sequence) position: , mismatch: 10, identity: 0.706

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
cgtcgaggtcatccgcgacaccgacgagatcggt	Protospacer
  *   ***** ***********.****** *. 

678. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

cggcgcgctcagcagcagcaccgccagcgttgcga	CRISPR spacer
tgccagcatcagctgcagcaccgccagcgctgccc	Protospacer
.* *.   ***** ***************.***  

679. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 10, identity: 0.714

cggcgcgctcagcagcagcaccgccagcgttgcga----	CRISPR spacer
cggctcgcccagcagcagcaccgcc----ccgccgactc	Protospacer
**** ***.****************    ..** .    

680. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.714

cggcgcgctcagcagcagcaccgccagcgttgcga----	CRISPR spacer
cggctcgcccagcagcagcaccgcc----ccgccgaccc	Protospacer
**** ***.****************    ..** .    

681. spacer 8.6|797283|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015585 (Roseomonas gilardii strain U14-5 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.656

accagggcatcccagcaggcgggtctatcaca	CRISPR spacer
gccagggcattccatcaggcgggtgcggattt	Protospacer
.*********.*** ********* ..   . 

682. spacer 8.9|797465|32|NC_009523|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053905 (Hymenobacter sp. BRD67 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

gttccgcaaccgctgtcacaacacacgcttct	CRISPR spacer
ccaagaggaccgctggcacaacaaacgcttcc	Protospacer
 .   . .******* ******* *******.

683. spacer 49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP046724 (Pantoea agglomerans strain ASB05 plasmid pASB05p2, complete sequence) position: , mismatch: 11, identity: 0.703

aacaacccgccgcgctgccagacttccaccagcgcga	CRISPR spacer
atctctgcgccgcgctgccaggctgccaccagcttat	Protospacer
* *  . **************.** ******** .. 

684. spacer 49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016892 (Pantoea agglomerans strain C410P1 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.703

aacaacccgccgcgctgccagacttccaccagcgcga	CRISPR spacer
acctctgcgccgcgctgccaggctgccaccagcttat	Protospacer
* *  . **************.** ******** .. 

685. spacer 49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034471 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_2, complete sequence) position: , mismatch: 11, identity: 0.703

aacaacccgccgcgctgccagacttccaccagcgcga	CRISPR spacer
atctctgcgccgcgctgccaggctgccaccagcttat	Protospacer
* *  . **************.** ******** .. 

686. spacer 49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034150 (Pantoea agglomerans strain L15 plasmid pPagL15_2, complete sequence) position: , mismatch: 11, identity: 0.703

aacaacccgccgcgctgccagacttccaccagcgcga	CRISPR spacer
atctctgcgccgcgctgccaggctgccaccagcttat	Protospacer
* *  . **************.** ******** .. 

687. spacer 49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034476 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_2, complete sequence) position: , mismatch: 11, identity: 0.703

aacaacccgccgcgctgccagacttccaccagcgcga	CRISPR spacer
atctctgcgccgcgctgccaggctgccaccagcttat	Protospacer
* *  . **************.** ******** .. 

688. spacer 49.21|2428907|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP031651 (Pantoea agglomerans strain TH81 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.703

aacaacccgccgcgctgccagacttccaccagcgcga	CRISPR spacer
atctctgcgccgcgctgccaggctgccaccagcttat	Protospacer
* *  . **************.** ******** .. 

689. spacer 49.23|2429057|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NC_029013 (Citrobacter phage IME-CF2, complete genome) position: , mismatch: 11, identity: 0.686

attacacagaagccgtcgcactcgtcgaagtctgg	CRISPR spacer
gttacacagaagccctcgcacacgtccggcgttat	Protospacer
.************* ****** **** ..  .*. 

690. spacer 49.97|2434511|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP043625 (Glutamicibacter sp. ZJUTW plasmid pQL1, complete sequence) position: , mismatch: 11, identity: 0.686

cgaccgctttcgtccagtcctcaagttcttgatgc	CRISPR spacer
cgaccgcattcgtccagtgctcaagacgggtgaga	Protospacer
******* ********** ****** .    . * 

691. spacer 49.97|2434511|35|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP038257 (Microbacterium sediminis strain YLB-01 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

cgaccgctttcgtccagtcctcaagttcttgatgc	CRISPR spacer
cgaccgcattcgtccagtgctcaagacgggtgaga	Protospacer
******* ********** ****** .    . * 

692. spacer 49.102|2434879|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

tctgcgccccagtcgtcgagcgccgcaagcagcgcgt	CRISPR spacer
tgccagtaggcgtcgtcgagcgcggcaatcagcgcgt	Protospacer
* .  *.    ************ **** ********

693. spacer 58.74|3155372|37|NC_009523|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 11, identity: 0.703

gcgtcgtcctcctcgccccgcagccggtcgaggaggt	CRISPR spacer
cggtactcctcctcgcccagcagcaggtcgagcgcca	Protospacer
  **  ************ ***** ******* .   

694. spacer 58.74|3155372|37|NC_009523|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.703

gcgtcgtcctcctcgccccgcagccggtcgaggaggt	CRISPR spacer
cggtactcctcctcgcccagcagcaggtcgagcgcca	Protospacer
  **  ************ ***** ******* .   

695. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

696. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

697. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

698. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

699. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

700. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

701. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

702. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

703. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

704. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

705. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

706. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

707. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

708. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

709. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

710. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

711. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MT241607 (Achromobacter phage AMA2, complete genome) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---tttaccgccgccgccgccgccgccgccgccgctgtgg	Protospacer
   *... ***.********************  *.*   

712. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KP202969 (Achromobacter phage JWX, complete genome) position: , mismatch: 11, identity: 0.703

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accgccgccgccgccgccgccgccgccgccgtcatgg---	Protospacer
   *.* *** ***.****************.*..*    

713. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to KP202969 (Achromobacter phage JWX, complete genome) position: , mismatch: 11, identity: 0.703

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accgccgccgccgccgccgccgccgccgccgtcatgg---	Protospacer
   *.* *** ***.****************.*..*    

714. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cgaggcggcgccgccgacgccgccgccgccgccgatc	Protospacer
   .  **** .******* ************  ***   

715. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cacggtggcgccgccgccgccgccgccgccgccagcg	Protospacer
   . ***.* .********************  **.   

716. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH746817 (Achromobacter phage vB_Ade_ART, complete genome) position: , mismatch: 11, identity: 0.703

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
accgccgccgccgccgccgccgccgccgccgtcatgg---	Protospacer
   *.* *** ***.****************.*..*    

717. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MT241605 (Achromobacter phage AMA1, complete genome) position: , mismatch: 11, identity: 0.703

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccgccgccgccgccgccgccgccgccgccgctgtac---	Protospacer
   *.* *** ***.*****************.*...   

718. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MH479916 (Mycobacterium phage GeneCoco, complete genome) position: , mismatch: 11, identity: 0.703

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
aacaccgccgccgccgccgccgccgccgccgccaagc---	Protospacer
   ..* *** ***.******************. *.   

719. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK224592 (UNVERIFIED: Mycobacterium phage Henu3, complete genome) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
ccgagcgccgccgccgccgccgccgccgccgtaccgg	Protospacer
 .   ** ***.*******************...* *

720. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP014514 (Frondihabitans sp. PAMC 28766 strain SR6 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
atcatgaccgccgccgccgtcgccgccgccgcgtatc	Protospacer
.** . . ***.*******.************** . 

721. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
ctgcagcgcgccgccgccgccgacgccgccgcgcggg	Protospacer
 * .   ****.********** **********.  *

722. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MK279849 (Mycobacterium phage Duke13, complete genome) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gatgtaggcgccgccgccgccaccgccgccgccgtag	Protospacer
* . . *****.*********.**********  . *

723. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NC_022067 (Mycobacterium phage Wanda, complete genome) position: , mismatch: 11, identity: 0.703

gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gatgtaggcgccgccgccgccaccgccgccgccgtag	Protospacer
* . . *****.*********.**********  . *

724. spacer 58.144|3154176|38|NC_009523|CRT,PILER-CR matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 11, identity: 0.711

aacttcgcccgcgcttccgcctcggcccgagcggccgc	CRISPR spacer
cgtttcgcccgcgctgctgcctcggcccgaactgttcg	Protospacer
 ..************ *.************.* *..  

725. spacer 58.144|3154176|38|NC_009523|CRT,PILER-CR matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 11, identity: 0.711

aacttcgcccgcgcttccgcctcggcccgagcggccgc	CRISPR spacer
cgtttcgcccgcgctgctgcctcggcccgaactgttcg	Protospacer
 ..************ *.************.* *..  

726. spacer 58.144|3154176|38|NC_009523|CRT,PILER-CR matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.711

aacttcgcccgcgcttccgcctcggcccgagcggccgc	CRISPR spacer
cgtttcgcccgcgctgctgcctcggcccgaactgttcg	Protospacer
 ..************ *.************.* *..  

727. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcaccggccggcgcagccgccgccgccgccgccgccagca	Protospacer
*   .  ******* ********************   *.

728. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

729. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

730. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

731. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

732. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

733. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

734. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

735. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

736. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

737. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

738. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

739. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

740. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

741. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

742. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

743. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

744. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

745. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

746. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

747. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gctgcttccggcgccgccgacgccgccgccgccgccgatc	Protospacer
* .*..********.**** ***************   . 

748. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NC_010335 (Caulobacter sp. K31 plasmid pCAUL01, complete sequence) position: , mismatch: 11, identity: 0.725

gacgtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---gccacctccgccgccgccgccgccgccgccgcccacggag	Protospacer
   *.* **  ***.******************** . **   

749. spacer 103.6|5434622|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 11, identity: 0.676

gcccttcacgctcaacgaaggtgtcggcaaacca	CRISPR spacer
cgacgacacgctcaacggaggtgacggcaacgac	Protospacer
   *  ***********.***** ******    

750. spacer 103.6|5434622|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN681228 (Xenorhabdus nematophila AN6/1 plasmid II, complete sequence) position: , mismatch: 11, identity: 0.676

gcccttcacgctcaacgaaggtgtcggcaaacca	CRISPR spacer
agctttcacgctgaacgaaggtatcggcggctgt	Protospacer
. *.******** *********.*****.. .  

751. spacer 103.21|5435627|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013635 (Rhizobium sp. N324 plasmid pRspN324e, complete sequence) position: , mismatch: 11, identity: 0.676

acacgcggcggacgcctatgttgccgcagcaacg	CRISPR spacer
caacccggcggacgcctatgtcgccgaattcgtc	Protospacer
  ** ****************.**** * . .. 

752. spacer 103.26|5435964|35|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 11, identity: 0.686

aattccgccggtggcggatgtcgggctgatcgctt	CRISPR spacer
cgatccggcggaggcggatgtcgggctggagattg	Protospacer
 . **** *** ****************.  ..* 

753. spacer 103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047377 (Aeromonas salmonicida subsp. salmonicida strain J410 plasmid p1AsJ410, complete sequence) position: , mismatch: 11, identity: 0.676

tactcgatccgtcggcgcgcctggcggattgctc	CRISPR spacer
ggtacgatccgccgccgcgcctggcggatcatgg	Protospacer
 .. *******.** **************...  

754. spacer 103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022183 (Aeromonas salmonicida strain S68 plasmid pS68-2, complete sequence) position: , mismatch: 11, identity: 0.676

tactcgatccgtcggcgcgcctggcggattgctc	CRISPR spacer
ggtacgatccgccgccgcgcctggcggatcatgg	Protospacer
 .. *******.** **************...  

755. spacer 103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017145 (Aeromonas salmonicida subsp. masoucida strain RFAS1 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

tactcgatccgtcggcgcgcctggcggattgctc	CRISPR spacer
ggtacgatccgccgccgcgcctggcggatcatgg	Protospacer
 .. *******.** **************...  

756. spacer 103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022178 (Aeromonas salmonicida strain S44 plasmid pS44-3, complete sequence) position: , mismatch: 11, identity: 0.676

tactcgatccgtcggcgcgcctggcggattgctc	CRISPR spacer
ggtacgatccgccgccgcgcctggcggatcatgg	Protospacer
 .. *******.** **************...  

757. spacer 103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022172 (Aeromonas salmonicida strain S121 plasmid pS121-3, complete sequence) position: , mismatch: 11, identity: 0.676

tactcgatccgtcggcgcgcctggcggattgctc	CRISPR spacer
ggtacgatccgccgccgcgcctggcggatcatgg	Protospacer
 .. *******.** **************...  

758. spacer 103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047375 (Aeromonas salmonicida subsp. salmonicida strain J409 plasmid p1AsJ409, complete sequence) position: , mismatch: 11, identity: 0.676

tactcgatccgtcggcgcgcctggcggattgctc	CRISPR spacer
ggtacgatccgccgccgcgcctggcggatcatgg	Protospacer
 .. *******.** **************...  

759. spacer 103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP052035 (Aeromonas salmonicida subsp. salmonicida strain J411 plasmid p1AsJ411, complete sequence) position: , mismatch: 11, identity: 0.676

tactcgatccgtcggcgcgcctggcggattgctc	CRISPR spacer
ggtacgatccgccgccgcgcctggcggatcatgg	Protospacer
 .. *******.** **************...  

760. spacer 103.75|5439259|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to CP052035 (Aeromonas salmonicida subsp. salmonicida strain J411 plasmid p1AsJ411, complete sequence) position: , mismatch: 11, identity: 0.676

tactcgatccgtcggcgcgcctggcggattgctc	CRISPR spacer
ggtacgatccgccgccgcgcctggcggatcatgg	Protospacer
 .. *******.** **************...  

761. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NC_047762 (Xanthomonas phage XAJ24, complete genome) position: , mismatch: 11, identity: 0.676

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
gctgctggtcaatcgcgataccggtgctgcaatc	Protospacer
************.*****.*****.*  ....  

762. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
tgtgccggtcaacggcgacaccggcggcgcgtcg	Protospacer
  ***.******* ************. ..*  .

763. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NC_030937 (Xanthomonas phage f30-Xaj, complete genome) position: , mismatch: 11, identity: 0.676

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
gctgctggtcaaccgcgatactggtgctgccatc	Protospacer
******************.**.**.*  .. .  

764. spacer 103.78|5439392|34|NC_009523|CRISPRCasFinder,CRT matches to NC_030928 (Xanthomonas phage f20-Xaj, complete genome) position: , mismatch: 11, identity: 0.676

gctgctggtcaaccgcgacaccggcgagatggaa	CRISPR spacer
gctgctggtcaaccgcgatactggtgctgccatc	Protospacer
******************.**.**.*  .. .  

765. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP022566 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence) position: , mismatch: 11, identity: 0.686

cggcgcgctcagcagcagcaccgccagcgttgcga	CRISPR spacer
gacagcgatcagcagcagcgccgccagcgccaagg	Protospacer
 .  *** ***********.*********... *.

766. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 11, identity: 0.686

cggcgcgctcagcagcagcaccgccagcgttgcga	CRISPR spacer
ggcggcgatcagcagcagcgccgccagcgccagcg	Protospacer
 *  *** ***********.*********...  .

767. spacer 49.30|2429568|37|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018064 (Rhodococcus sp. 2G plasmid p1, complete sequence) position: , mismatch: 12, identity: 0.676

ccgatctcgacttccgcagcgccttcgttgcgccgga	CRISPR spacer
cgaggatcgccttccgcagtgccttcgttgcgagttg	Protospacer
* ..  *** *********.************    .

768. spacer 49.34|2429861|39|NC_009523|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 12, identity: 0.692

tcggcgtaacggtcaacgtcgacgcgctgctggcggatt	CRISPR spacer
atacagtaacgctcagcgtcgacgcgctgctggtcaagg	Protospacer
 ..  ****** ***.*****************. .*  

769. spacer 58.60|3154325|37|NC_009523|CRISPRCasFinder matches to MT491206 (Pseudomonas phage vB_PaeM_USP_3, complete genome) position: , mismatch: 12, identity: 0.676

tttcttccgccttcttctcttccgccttcttgttctt	CRISPR spacer
cctgcgccgccttcttctcttcggccttcctggcgcg	Protospacer
..* . **************** ******.** . . 

770. spacer 58.60|3154325|37|NC_009523|CRISPRCasFinder matches to MT491204 (Pseudomonas phage vB_PaeM_USP_1, complete genome) position: , mismatch: 12, identity: 0.676

tttcttccgccttcttctcttccgccttcttgttctt	CRISPR spacer
cctgcgccgccttcttctcttcggccttcctggcgcg	Protospacer
..* . **************** ******.** . . 

771. spacer 58.60|3154325|37|NC_009523|CRISPRCasFinder matches to NC_026600 (Pseudomonas phage vB_PaeM_C1-14_Ab28, complete genome) position: , mismatch: 12, identity: 0.676

tttcttccgccttcttctcttccgccttcttgttctt	CRISPR spacer
cctgcgccgccttcttctcttcggccttcctggcgcg	Protospacer
..* . **************** ******.** . . 

772. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 12, identity: 0.676

gtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---cctgccgccgctgccgccgctgccgccgccgtcgttc	Protospacer
   .*.* ***.**.********.********  .**   

773. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to MN234219 (Mycobacterium phage Mercurio, complete genome) position: , mismatch: 12, identity: 0.676

---gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
agagccggcgcgtccgccgccgccgccgccgccggga---	Protospacer
   *.*  **   *.******************* *    

774. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP014276 (Martelella sp. AD-3 plasmid unnamed1, complete sequence) position: , mismatch: 12, identity: 0.676

------gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cgaagtggcgccgccgctgccgccgccgccgccgatc------	Protospacer
      * * *** ******************** .       

775. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_CP011276 (Planctomyces sp. SH-PL62 plasmid pPL62-3, complete sequence) position: , mismatch: 12, identity: 0.676

------gtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
aaactgatatttgccgccgccgccgccgccgccgccg------	Protospacer
      .* *..* ***.*******************      

776. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MT241607 (Achromobacter phage AMA2, complete genome) position: , mismatch: 12, identity: 0.7

gacgtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---gcctttaccgccgccgccgccgccgccgccgccgctgtgg	Protospacer
   *.**... ***.********************  *.*   

777. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 12, identity: 0.7

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
agttccgccggcgctgccgccaccgccgctgccgcccgag	Protospacer
... .* **************.*******.***** .  *

778. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_CP005085 (Sphingobium sp. TKS plasmid pTK1, complete sequence) position: , mismatch: 12, identity: 0.7

gacgtctccggcgctgccgccgccgccgccgccgcgtccg---	CRISPR spacer
---atttcccccgtcgccgccgccgccgccgccgccgccaatg	Protospacer
   .*.***  **..********************  **.   

779. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MT241605 (Achromobacter phage AMA1, complete genome) position: , mismatch: 12, identity: 0.7

------gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
cttactgccgccgccgccgccgccgccgccgccgccgctg------	Protospacer
      * **.* *** ***.*****************.*      

780. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MT241605 (Achromobacter phage AMA1, complete genome) position: , mismatch: 12, identity: 0.7

---gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
actgccgccgccgccgccgccgccgccgccgccgctgtac---	Protospacer
   * **.* *** ***.*****************.*...   

781. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 12, identity: 0.7

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
agttccgccggcgctgccgccaccgccgctgccgcccgag	Protospacer
... .* **************.*******.***** .  *

782. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 12, identity: 0.7

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
agttccgccggcgctgccgccaccgccgctgccgcccgag	Protospacer
... .* **************.*******.***** .  *

783. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 12, identity: 0.7

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
agttccgccggcgctgccgccaccgccgctgccgcccgag	Protospacer
... .* **************.*******.***** .  *

784. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MN234219 (Mycobacterium phage Mercurio, complete genome) position: , mismatch: 12, identity: 0.7

gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gccagagccggcgcgtccgccgccgccgccgccgccggga	Protospacer
* *.   *******  *******************    .

785. spacer 58.184|3157150|40|NC_009523|CRT,PILER-CR matches to MH479916 (Mycobacterium phage GeneCoco, complete genome) position: , mismatch: 12, identity: 0.7

---gacgtctccggcgctgccgccgccgccgccgccgcgtccg	CRISPR spacer
gcgaacaccgccgccgccgccgccgccgccgccgccaagc---	Protospacer
   .**..* *** ***.******************. *.   

786. spacer 103.61|5438316|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 12, identity: 0.647

gcggatcgaggaaggcgcggagatcgcaatcacc	CRISPR spacer
cgatctcgacgatggcgcggagatcgcaaggcat	Protospacer
  .  **** ** ****************    .

787. spacer 103.73|5439125|34|NC_009523|PILER-CR,CRISPRCasFinder,CRT matches to NC_023694 (Rhodococcus phage ReqiPoco6, complete genome) position: , mismatch: 12, identity: 0.647

atgcgatgcaccgtggttcatcggcgccgtgcac	CRISPR spacer
gaatgatgccccgtcgttcatcggcgcccgaggt	Protospacer
. ..***** **** *************  . ..

788. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cggcgcgctcagcagcagcaccgccagcgttgcga	CRISPR spacer
gacagcgatcagcagcagcgccgccagcgccaatg	Protospacer
 .  *** ***********.*********...  .

789. spacer 103.89|5440141|35|NC_009523|CRISPRCasFinder,CRT matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cggcgcgctcagcagcagcaccgccagcgttgcga	CRISPR spacer
gacagcgatcagcagcagcgccgccagcgccaatg	Protospacer
 .  *** ***********.*********...  .

790. spacer 58.98|3157153|37|NC_009523|CRISPRCasFinder matches to NZ_LN832560 (Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence) position: , mismatch: 13, identity: 0.649

gtctccggcgctgccgccgccgccgccgccgcgtccg------	CRISPR spacer
------ggcgacggcgcggccgccgccgcggccgccgaaaagc	Protospacer
      **** .* *** *********** **  ***      

791. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 14, identity: 0.622

tatgggcgaccgccgtccgcgccgccgccgtcgatga---	CRISPR spacer
---gtgcggcgaccgtcgaccgcgccgccgccgagaaact	Protospacer
   * ***.* .***** .*  ********.*** .*   

792. spacer 70.27|3783863|37|NC_009523|CRT,CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 14, identity: 0.622

tatgggcgaccgccgtccgcgccgccgccgtcgatga---	CRISPR spacer
---gtgcggcgaccgtcgaccgcgccgccgccgagaaact	Protospacer
   * ***.* .***** .*  ********.*** .*   

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	233410 : 242980	10	Bacillus_phage(33.33%)	protease	NA
DBSCAN-SWA_2	1996654 : 2045788	41	Catovirus(12.5%)	plate,tail,transposase	NA
DBSCAN-SWA_3	4584386 : 4650453	51	Agrobacterium_phage(12.5%)	tRNA,protease,transposase	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NC_009523|233410:242980|DBSCAN-SWA
TTCAGCGCCGCTCCTCGTTGCGCCGTGGCGCAGCGCGCGGTCCGCGTGCGCCGAACGGTCCGGCTGAGTACTCCATCGTATGCCCGCGGTCGGCTGACAGCCCAACGCTGGGTTGCTGCGGTCCATCGCTCAGTGAGCGACCAACCTCCGCAGCCCGCAGTTCCTGCGCCTGCGCGAGCAGTTCCGGCGCCGGCTCGTGGTAGAACTCCAGCGCCTCGCCGTGCCGATCCACGCCGGTGGCGACCACCAGCACTTTACTGCCAGCCGGAATGCCGCCCGATGCGATCAGATCGGCGAGTGGCGCCTCGATCAGTTTCAGCAATTGCTGGCGGAGCGGGCGAGCGCCGAAGCGCGGCTCGAACCCCTTCCGCAGCACATATTCACGCGCTTCTTCGGTCAACGTCAGGTGAATGCCATGCCGCAGGTACTGCTCATTCGCCTCCTGCACCATCCGATCAAGCACCTGTCGCAGCACCTCGCTCGAGAGCGGACGAAACGCAATAATCTCATCGATGCGGTTGATCCACTCAGGTTGAAACACTTTCTGCAACGCCTCGAACCCGATCTGATAGATCTGCCGTCCTGTCGCCTCGACATCCTGACGTGACGTGCGAAAACCGATGGTGCGCTGGTCAAGAAAATCAACCATCTCCTTCGCCCCAACGTTGGTCGTCAAAATCACAATGCTATTACTGAACGACACCCGCCGTCCGCCGTTCAACAGCAGAATCTCGCCATCCTCCATGATCTGGAGCAGCAGATTCCACAACTCCGGTTGACCTTTTTCGATCTCGTCAAACAGGACGACGCTATTCTCCTGCTCGATGATGTCGGGATTCAGCAACGGCTTCTGGTCGCGCCCGACGTAGGACGGCGGCGCTCCAACCAGCGCCGACACTTCATGACCCTGTGAGAACAGCGAGCAGTCGATCTTAAGAAACGCCTCGCCATCGGGACGCAGCAGTTGCGCCAGCCGGCGCGCCATTGCCGTCTTGCCGACCCCGGTCGGTCCCAGGAACAGCAACGTCGCGCGTGGGCGGCGCGGATTACCCGCCGAAAACCCGAAACGCGCCCGGTTCAGCACCCGGATGACCGCTTCGATGGCGCGCTCCTGACCAAAAATGGTGTGACGCAGTTGCTTTTCCACAATATCAAGCGGATTCTTGTCGCCGCGGATCGCACGCTGCATGGTGGACGGTATCTGGTCCATAACAACCTCTCAATGAAACACCACGGACTATATTCCTGGGATCGATTATAGACAAGAGATCGGGCGCGTTTGTATGCAACATTGTGTCGGGTATGTTACGAAGATGTGATCATTATGCTGATACGTATCTTTCCCATGTGAGTTTAACCCTGGCATAACAGAACGTTAATGCTCATCGATTAGAGTTGAGATATGACGACAATACTCCTGGTCGAAGACGATAGCGTTCTTCTCGAGACGCTTTCGTACAATTTTGAGCGGGCAGGGTTTCAGGTCGCAACCGCCTCGGATGGTTTGACCGGGCTGGAAATGGCGCGTCGGACGCATCCCGATCTGATCATCCTGGATGTGATGCTGCCGGGACTGGATGGTTTTTCCGTCTGTCGCGCAGTGGCGAAAGAAACAACCGTTCCGATTGTTCTGCTGACGGCGCTGCACGACGAGGCGCACCGGATCGCCGGGCTGGAACTCGGCGCAATCGATTACGTGGTCAAGCCGTTCAGTATGGGTGAGTTGCTGGCGCGTGTACGCGCCATCCTGCGCTGGAATGAACGCCAGCGCCAAACCCCATCCTCGAATGTGCTATGCGTTGGTCCGGTGCAACTGGATCGCAACAGCCGACGCGTCTGGTACAAGGACCGCGAGATCGAACTCTCGCACAAAGAGTTCGATCTGCTCGCGTGCCTGATGCACAACGCCGGTGTCGCGCTTTCGCGCGACCTGTTGCTGGAGCGTGTCTGGGGCAGCGATTTTCTCGGTTCGAACCGGACAATCGATGTTCACGTGCGCTGGCTGCGCGAAAAACTGGAGCCTGATCCCGCCAATCCAACGCTGATCCGCACCGTGCGCGGCATCGGGTACTGCTTTCAGGACCCGGCAACAGACCCGCCAGGGCGTCGCATGCTGGAGGAGTCGGAGCCAGCATCCTGATTGCCGGTCGCTCAGCGGCGCGTGCGTTCTTTGAGGGCGCGCTCGATGTCGCGGCGCGCTTCACGGCGCGCGATGTCGTCGCGTTTGTCGTAGAGTTTCTTGCCGCGCGCCAGCCCGATTTCGACTTTTGCGCGCCGCCCGCGCAGATACAGCCGGAGCGGCACGAGCGTGTATCCCTGCCGTTCGACCTGCCCGGCAATGCGGGAAATCTCGCGTCGATGCAACAGCAACTTCCGCGGTCGCGTCGGCTCGTGGTTGAAGTACGCCCCGGATTGCTCGTAGGGCGCAATATGCACATCGTAGAGCCATGCCTCGCCATCGACGATGCGCACATAGCCGCCACGCAGGTTCACCTGCCCGGCGCGGATCGACTTGATCTCACTGCCGGTCAGCGCAATCCCCGCTTCATACGTCTCTTCGATGAAATAATCGTGGCGCGCCTTGCGATTGTCGGCAACCACGCGCTCAATATCGTTCCCCCGCGCCATAGCGGGACCTCGCTTCACATTCCGTACTCAACAATGTCCTGACATTATAGATGCCACCTGCACAATGCACAAACCGGGATGCGGCGTGTGCGCTCAGCGCGCCATCAGCGCGGCATTGATGGCATCGCGCAGGCGAAGCGCCGTCGTGCGCGCCGCCGCAGCAAAGTTCGTTCCGCGGTCGGCGTACAACACCGTGCGCGAGACGTTGATCATCATCAGGGGTTCATCGACCGCTGCGGCGGCGCGCACCGTTGTGTCCAGATCGCCACCCTGCGCCCCGATTCCCGGCACAAGCAGCAACATATCCGGGCAGGCGCGGCGAACCTCCGTGATCGCAGTCGGATGTGTTGCGCCGACCACCAGCCCTGTATTGCCGTGCATATTCCAGCGGTCGCGCGCCATCTCCGCAACCGCCAGATACAGCGGGCGTCCATCCGCCAGGCGCATATCCTGCAGATCGTGGCTGCCAGGGTTCGATGTTTTGCAGAGAATGAAACATCCCCGTTGGGAATGCCGCAAGAATGGTTCGAGCGCATCGCCTCCCAGATACGGATTCACCGTCACTGCATCGGCGTCGAGCACCTCAAAAGCGGCGCGCGCATACGCTTCCGCTGTGGAACCAATATCGCCGCGTTTGGCATCGAGAATGATCGGTGGCCCCGGGCGCAACCGGATGAGCCGTTCGAGCGCCGACCATCCGGCGGCGCCGAACGCCTCGAAAAAGGCAATATTGGGTTTGAACGCGCACACGAGATCCGATGTCGCGTCCATAATGGCAGCGCAAAAAGCGTACACCCCCTCCGCGTCCGCCGGCAGATGCACCGGCATCCGCATTGGCTCCGGGTCTAACCCAATGCACAACCAGCTCCGGTTGCGTCGGGCAGTCGCACAGACTGTTTCACGAAAGGTCATACCTTCACGCGGTTCTGCGAACCAATTGCCTCGCAAACGAGGTAGCGCAGCACTGACAGTGTAACAGTGTAACTGACAGTGTAACTCGCAATCATTATACTATCCGCATCGCATCTGACTATTGGCTATCGGCTATCGGCTATCGCCTATCAACTCAGGCGCGATGCGGACAGGCTCTGTGGATACTGTGGACAAAGTGTTTATAACAGTCGTGGATAAAGGGGTTGACTTTAACCACTTGCTAATGTATAGTAGCCGCAGAAACAACGGAGCGCCGTGTTCGCGTTCTGGTCAGGCAATGAAGTTGGGGGGCTTGGAGTCATTTACTCTTAGCCCCGTCTTGTTGCCAACTGTACATCGGCAGTATTGGACTATCGCACGATCGGCAGGGGCGACAGCCCGGCGTGATCGCAAATGAAATCAATGCAAGAAGGTAGACACATGGCCACCGAGATCGTGGAGCAGACACAACAGGCGTGGGCGCAAACCCTCGAGTATCTGCTGGAAATCGGGCGCACACGCGGGTTCCTTACCTACAACGAAATCCTTGAAGCGTTACCGCAACCTGAGCACCACATTGCTGATGTTGATCAACTCTATGCTTCCCTTCAAGCAGAGGGCATTCGCGTCGTCGAAACCCCGCTCGACATCCACGACAACGGTTCGACCGGCGACGATGAGTTGCTGGCGGATATGCCCGACCTGACCGATGTGGCGCTCGATGATCCGGTCCGCATGTATTTGCAGGAGATCGGTCAGGTTCCACTCCTGTCGGCGGAACAGGAAGTCATGCTGGCAAAGGCGATGGAAGCCGGTCACCGTGCGCGTCGCGCGCTCGAACGCGAAGAGTACAGCTCCTGGCAGGAGCGCGTGATGTACGAGCAGCAGGTCGCGCAGGGGAATGAGGCGCGCCAGCACCTGATCCAGGCCAACCTGCGACTGGTCGTTTCGATTGCCAAGAAGTACACATCGTATGGGCTGACGATGATGGACCTGGTGCAGGAGGGCAATATCGGTCTCATGCGCGCAGTCGAAAAGTTCGACTATACCAAAGGGCACAAATTCTCCACGTATGCCACATGGTGGATCCGCCAGGCGATCACCCGCGCCATCGCCGATCAGAGCCGCACCATTCGTCTGCCGGTGCATATGGGTGAGGCGATCAGCCAGGTGAAGCGTACCTCGCACAAACTCCAGCAGACGATGCAGCGCGAACCTACGCCGGAAGAGATCGCCGACGCAATGGGCATCAGTTCGACGAAGGTACGCCGCACGCTGGAGGCGTCGATGCACCCGCTCTCGCTCGAAATGCCGGTCGGGCAGGAAGGTGAAGGGCGGATGGGCGACTTTATCGAAGACGACCGGATCTCGACGCCGGCTGAGGCTGCTGCGGCTTCGATGTTGCGTGAGCAACTTGAAGAGGTGTTGCAGAAGCTGCCGGAGCGCGAGCGCAAGATTATTCAGTTGCGCTACGGCTTGAAAGATGGGCGGTATCGCACGCTTGAAGAGGTCGGCATGGAGTTTGGCATTACGCGCGAACGCATCCGCCAGATCGAAGCGGTGGCGCTTCGAAAATTGCGCCATCCGCACCTCGGTAAGAAGTTGCGCGGCTATCTCGATTGACGCGCTGTTGCGCTCGCCCCCTTGTCTCCTGGCGACAAGGGGGCTTCTTTGTTTGATGGCGCCGGGTCGCGTGCTCGTGCCCGACTCCTGGTATACTACCTGTGTAACCGTGCGTCATCCATCCGTCTTTGTGCCGCCATCGGCTATAATGCCGTTAACGCGCTGCGTTGCGGGCTGTTCGTCAACCTGCCTCACACGCGGGGGCGCTATCCCGGTGTGAGTTGGAATCGATTGTTTGTGCATCTGTAAGGAGACATACGTATGGCAACTCGACTGAGCGATGCCGAGATCGAAGAGCGCCTCGGCGATCTGACCGGATGGACACGCCAGGGCAACGAGATCCGGAAGACATTTCAACTTCCCTCGTTCCCTTCTGCAATTGCATTTGTTGTCAACGTCGCCTTTCTGGCTGAGGCTGCTGGACACCATCCCGATATCGATATTCGCTGGCGTAAGGTGACGCTAAGCCTGACCACCCACGACGCTGGCGGCTTAACGCAGAAGGACTTCGATCTGGCCACCCAGATCGATGAGATTATGTAGGCAGCGAGCGGTGTGGTTCAGACAGGTGTACCGGTGCGCATCGTCAATATCTGTTGCGACCCGTGCACGCAATGGAAGCCCGGCACAGTGATCCGCATCGTTCTCCGTCAGCATTGCTGCGAAGAGCGAGACAGACCGACGAAAGGTTGGGATGGCGCAACGCAGGTGGCGTTACCGGGTTCGTCAATTCGTCACCGCCCTGATCGCCAGTATTCGTCTGGACGAACGCGTCCTGCTCGTGTGCACGTTGAGCGATCCGCAGCTGCTGCTCTTTGAGCGTATGCCGCGGTTCGCTCAACGGCATAGCCTCGATGTCTATCACGCACTGGTGCGCGCCGGTCACACCGATCCACATCTGCTCCAGGCGGCGTTGTTGCACGATTGCGGAAAGGTTGATCCGAACGGTCGCACCATCCCCCTGATATACTATGCCATTATTGTGCTGCTGCAACAGTATGCTCCCGATCTGTACCAGCGCGCCGCGCGCAATGGTCGCGGTCTGCTCTACCCGTTCGCGCTTCACGCCACCCACGAGCAGCGCAGCGTCATCTACGCCCGGGCGGCAGGCAGTCATCCAGAGGTCGTGCAGATCCTGAGCGACTACGCCGAACGACGCGCAACGCCGTTCACCGACGCACTACGCGCTGCTGATGATACGAATTGAACGCCATGTTCGTCGATCATCTCGACTACACCATAACTCTGCCGGTATTCGAGGGTCCGCTCGAGCTGCTGCTGCGCCTGATCGAGCGCGAGGAACTGGATATTACCAGCGTGGCGCTTGCGCACGTCGCCGAACAGTACCTTGCTCATGTGCGTTCAATGGAAGCGCCGGATCCGGCGTCGCTCTCGGCATTTCTGGTTGTGGCAGCGCGTTTGCTGCTGTTGAAATCGCGGGCATTGCTGCCACAACCGCCAGCGACCGATGATGCGGCGCCAGACGACGATGACGACGCACTGGTGCGTCAGTTGCAGGATTATCAGCGCTTCCGCCGACTCGCTGCGCTGCTGCGCCTCTATGAAGGTCGTCGCATGTATCTGCGGCTTGCCCCGCCTCCGGCGCCCCGCGCCGCGTCGCTCGACCATACGGTCGCCGACCTGATTGCTGCCATACAACGCCGCATGCAGTTGATGCTGCCACTCGATCCGCCGCCTGTTGCGCTTCCCGCACCGAAGATCGTCACAGTCGGCGATATGGTTGAGCGCATTCGAGCGCTTCTATCGGAACGTTCCTGGATCGCATTTGAAGAAATCACCTCGCTGACCGCCCGACGCATAGAGATCATCGTCGCATTCTGGGCGGTGCTGGAAATGTGGAAACGCCGCGCGGTTACGGTCGAACAGACCGGTCTCTTTGGCGCGATTGTGATCCGCCACGGACCAGGGTTCGTTGCTGGTTGGGAGTTGGAGGTGGAGGGTTGAACCTTCAACGTTCAACCTTCAACGTTATCACCCCTCGCTCCTCCCGTCGTGGTCGCGCTTGAAATCGACAAAACGATACCCGATTCCGCGTTCGGTCAGAATGTACTTCGGGTTTGCCGGGTCCTCTTCGATCTTCTGGCGCAAATAGGTGACATAGAGCCGCAGGTAGTGCGTCTCATCGCGGTACTCCGGACCCCACACCTTGCTCAGGAGTTGCTCGTGGGTCATCACATACCCGGCATTCTGCACCAGGTGGTACAGCAACCGATACTCGGTCGGGCGCAGGTTCACCCGTTCGCCGTTCACCAGCACCTCGCGTCGGGCAAAGTCGATCTGAAGTCGGTCGTCTACCTTCACCAGGGTTTGCGGCGCTGGCGGCGGGGTATAGTGGCGCCGCAGCACGGCGCGAATGCGACTCACCAGTTCCCGGTGACTGAACGGCTTGCCGATATAATCATCGGCGCCCAATTCCAACCCTTTGATACGGTCCTCTTCATCGTCCTTAGCGGTCAGCACCAGCACCGGCACCGACGACGCCTGCCGCAGTCGGCGCAGGGTCTCGAAACCATCCATCACTGGCATCATAATGTCCAGCAACACGACATCGGGCATCTCGTCGCGCACCTTCTCCAGCGCCTCACGTCCGTTCGATGCGCTGATAACCCGACACCCCTCAAGCTCCAGATTCATGCGCATGAAATTGACCATGCGCGGCTCGTCATCAACGACGAGGATCAATTTGTCTTTGAGTTCTGACATATGTGTGAGTTCCTCACTGTTCATGGTCCTCGAGCAGCGGCGGTTCGGTGTACGGCGGCAACATGGCTGGCGGTTCGCTTGTGCCTTCAGAAGAAGTAGATGGCGCTTCAGGCGCCGCTGTCCGGTCGCTCAGCATCGGCGTCGCCAGCGGTACGGTGAACGAAAAGCGGGAACCGCGTCCGGGTCGACTGTCCACCCAAATTCGCCCCCCTTGCGCTTCGACGATGACACGCGACAGGAACAACCCCAGTCCAGCCCCCTGCGTTTCGCGGCGCAGACGATTATCGACGCGGTAGAAGCGACGGAAAAGTTTCTTCTGCTCCTCGAACGGAATGCCAATCCCCTGATCACTGACCGAGATGATCGCATAATCACCGCTCACGCGCGCCGCGATGCGCACCAGTCCGCCGTTCGGACTGTACTTGATCGCATTGCTGACCAGATTTTCCAGCACAGTGCGGGTGCGCTCATAGTCGGCGTGCACCGGTGGCAAATCATCAGGGATGTCGATCTCGAAGGTAAATCGCTCGCCTGCCTGCGGCATGAATCGCTCGACCACACGTTCCACCAGCGGACGCACCGGCCAGTCGCTCAATTCCAGCCGCATCCCGTCGGTTTGCAGGCGAGACGCCTCCAGCAGCGTATTGATCTGTTGCGCCAGACGGTCAGCCTCTTCGATAATGACCATCAACCCTTCCCGCAGGGTCGCAGCATCCCAGGCTGCATCCTGGCGCGCCAGCGTTTCAGCATACCCTTTGATAATGCTGACCGGTGTACGCAGTTCGTGCGAAATAACCGAGATGAAGGTATTCTGCATCTCCGCCTCGATCTTTTGCTCGGTCACATCGCGGACATTCGCAATTGCGCCCAAAAATGCACCCTGTGGAGTGCGCTGTGCGGCGTAGCGACTCTGAATATAGAGACGTCGACCGTCGCGGGTGGTGATCCACCCTTCCGCAACGGGGTTCGGCTCGAACGGTTGCCGTTGCAGCGGGCAATCGGTCAGACAGAGGTTGGCGCCCTGCGGCGTATGGATCGCCAGCACCTCGGCGCAGGGACGTCCGATCGCCTCTTCACGACTCCACCCGGTCAGCTGTTCCATGGCGCGGTTGAACGTCGTAATACGCCAGCGCGAGTCGAGGATCATCACGCCATCGGCACTATTCTCGATGAGCGCATCGAGGTGCTGCTTTTCGCGCAGCACACTCTGGAACAGGCGCGCATTCGAAACCGCGATAGCCGCCTGATCGGCGAAAGCAGTGAGGAGTTGATGTTCCTCTGCGGTGAACTCGACATTCAGCGCCGCACGAAAGACATAGATCACCCCGACCGTCGCGCCGCGAAACACGAGCGGCAACGCACTCACGTGGCGCAACGGCAGCCCGATGTCGGCGCCAACCTCGCGCAGGCGGCGCACCAGCGTCGGTTGATCGTCGATGGGGGTCGCCAGCAGATCGGTAAAAGCGGGCCAGGTTTCGCGCGCCAGCCCCGACGCCGCATAGATGCGCGTCACGCCGTCATCATCGCGCAGCGCGATCAAACCGGAGTTGCCGGCGAGCAGGTCAACCGCCACCTCGATCACCAGGTTGAGCACACTGGTCAGATCGAGGTGCGCCGTGATCGCACGACTGATGCGCAGCAACGACTCGAGTTGCCGCAAACGCTGGTCATACCGGTCTAACAT

Protein sequences of DBSCAN-SWA_1

>NC_009523|233410:242980|239784_240537_+|WP_011954989.1|DBSCAN-SWA
MFVDHLDYTITLPVFEGPLELLLRLIEREELDITSVALAHVAEQYLAHVRSMEAPDPASLSAFLVVAARLLLLKSRALLPQPPATDDAAPDDDDDALVRQLQDYQRFRRLAALLRLYEGRRMYLRLAPPPAPRAASLDHTVADLIAAIQRRMQLMLPLDPPPVALPAPKIVTVGDMVERIRALLSERSWIAFEEITSLTARRIEIIVAFWAVLEMWKRRAVTVEQTGLFGAIVIRHGPGFVAGWELEVEG
>NC_009523|233410:242980|238833_239115_+|WP_011954987.1|DBSCAN-SWA
MATRLSDAEIEERLGDLTGWTRQGNEIRKTFQLPSFPSAIAFVVNVAFLAEAAGHHPDIDIRWRKVTLSLTTHDAGGLTQKDFDLATQIDEIM
>NC_009523|233410:242980|235560_236037_-|WP_011954984.1|DBSCAN-SWA
MARGNDIERVVADNRKARHDYFIEETYEAGIALTGSEIKSIRAGQVNLRGGYVRIVDGEAWLYDVHIAPYEQSGAYFNHEPTRPRKLLLHRREISRIAGQVERQGYTLVPLRLYLRGRRAKVEIGLARGKKLYDKRDDIARREARRDIERALKERTRR
>NC_009523|233410:242980|234811_235549_+|WP_011954983.1|DBSCAN-SWA
MTTILLVEDDSVLLETLSYNFERAGFQVATASDGLTGLEMARRTHPDLIILDVMLPGLDGFSVCRAVAKETTVPIVLLTALHDEAHRIAGLELGAIDYVVKPFSMGELLARVRAILRWNERQRQTPSSNVLCVGPVQLDRNSRRVWYKDREIELSHKEFDLLACLMHNAGVALSRDLLLERVWGSDFLGSNRTIDVHVRWLREKLEPDPANPTLIRTVRGIGYCFQDPATDPPGRRMLEESEPAS
>NC_009523|233410:242980|240564_241296_-|WP_011954990.1|DBSCAN-SWA
MSELKDKLILVVDDEPRMVNFMRMNLELEGCRVISASNGREALEKVRDEMPDVVLLDIMMPVMDGFETLRRLRQASSVPVLVLTAKDDEEDRIKGLELGADDYIGKPFSHRELVSRIRAVLRRHYTPPPAPQTLVKVDDRLQIDFARREVLVNGERVNLRPTEYRLLYHLVQNAGYVMTHEQLLSKVWGPEYRDETHYLRLYVTYLRQKIEEDPANPKYILTERGIGYRFVDFKRDHDGRSEG
>NC_009523|233410:242980|239266_239779_+|WP_011954988.1|DBSCAN-SWA
MAQRRWRYRVRQFVTALIASIRLDERVLLVCTLSDPQLLLFERMPRFAQRHSLDVYHALVRAGHTDPHLLQAALLHDCGKVDPNGRTIPLIYYAIIVLLQQYAPDLYQRAARNGRGLLYPFALHATHEQRSVIYARAAGSHPEVVQILSDYAERRATPFTDALRAADDTN
>NC_009523|233410:242980|233410_234619_-|WP_011954982.1|protease|DBSCAN-SWA
MDQIPSTMQRAIRGDKNPLDIVEKQLRHTIFGQERAIEAVIRVLNRARFGFSAGNPRRPRATLLFLGPTGVGKTAMARRLAQLLRPDGEAFLKIDCSLFSQGHEVSALVGAPPSYVGRDQKPLLNPDIIEQENSVVLFDEIEKGQPELWNLLLQIMEDGEILLLNGGRRVSFSNSIVILTTNVGAKEMVDFLDQRTIGFRTSRQDVEATGRQIYQIGFEALQKVFQPEWINRIDEIIAFRPLSSEVLRQVLDRMVQEANEQYLRHGIHLTLTEEAREYVLRKGFEPRFGARPLRQQLLKLIEAPLADLIASGGIPAGSKVLVVATGVDRHGEALEFYHEPAPELLAQAQELRAAEVGRSLSDGPQQPSVGLSADRGHTMEYSAGPFGARGPRAAPRRNEERR
>NC_009523|233410:242980|237390_238572_+|WP_049767448.1|DBSCAN-SWA
MATEIVEQTQQAWAQTLEYLLEIGRTRGFLTYNEILEALPQPEHHIADVDQLYASLQAEGIRVVETPLDIHDNGSTGDDELLADMPDLTDVALDDPVRMYLQEIGQVPLLSAEQEVMLAKAMEAGHRARRALEREEYSSWQERVMYEQQVAQGNEARQHLIQANLRLVVSIAKKYTSYGLTMMDLVQEGNIGLMRAVEKFDYTKGHKFSTYATWWIRQAITRAIADQSRTIRLPVHMGEAISQVKRTSHKLQQTMQREPTPEEIADAMGISSTKVRRTLEASMHPLSLEMPVGQEGEGRMGDFIEDDRISTPAEAAAASMLREQLEEVLQKLPERERKIIQLRYGLKDGRYRTLEEVGMEFGITRERIRQIEAVALRKLRHPHLGKKLRGYLD
>NC_009523|233410:242980|241309_242980_-|WP_011954991.1|DBSCAN-SWA
MLDRYDQRLRQLESLLRISRAITAHLDLTSVLNLVIEVAVDLLAGNSGLIALRDDDGVTRIYAASGLARETWPAFTDLLATPIDDQPTLVRRLREVGADIGLPLRHVSALPLVFRGATVGVIYVFRAALNVEFTAEEHQLLTAFADQAAIAVSNARLFQSVLREKQHLDALIENSADGVMILDSRWRITTFNRAMEQLTGWSREEAIGRPCAEVLAIHTPQGANLCLTDCPLQRQPFEPNPVAEGWITTRDGRRLYIQSRYAAQRTPQGAFLGAIANVRDVTEQKIEAEMQNTFISVISHELRTPVSIIKGYAETLARQDAAWDAATLREGLMVIIEEADRLAQQINTLLEASRLQTDGMRLELSDWPVRPLVERVVERFMPQAGERFTFEIDIPDDLPPVHADYERTRTVLENLVSNAIKYSPNGGLVRIAARVSGDYAIISVSDQGIGIPFEEQKKLFRRFYRVDNRLRRETQGAGLGLFLSRVIVEAQGGRIWVDSRPGRGSRFSFTVPLATPMLSDRTAAPEAPSTSSEGTSEPPAMLPPYTEPPLLEDHEQ
>NC_009523|233410:242980|236130_236949_-|WP_011954985.1|DBSCAN-SWA
MTFRETVCATARRNRSWLCIGLDPEPMRMPVHLPADAEGVYAFCAAIMDATSDLVCAFKPNIAFFEAFGAAGWSALERLIRLRPGPPIILDAKRGDIGSTAEAYARAAFEVLDADAVTVNPYLGGDALEPFLRHSQRGCFILCKTSNPGSHDLQDMRLADGRPLYLAVAEMARDRWNMHGNTGLVVGATHPTAITEVRRACPDMLLLVPGIGAQGGDLDTTVRAAAAVDEPLMMINVSRTVLYADRGTNFAAAARTTALRLRDAINAALMAR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011954982.1|233410_234619_-|protease	ATP-dependent Clp protease ATP-binding subunit	A0A0S1WEW6	Vibrio_phage	6.5e-36	33.0
WP_011954983.1|234811_235549_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.2e-39	39.5
WP_011954984.1|235560_236037_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	6.7e-37	53.8
WP_011954985.1|236130_236949_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_049767448.1|237390_238572_+	RNA polymerase sigma factor RpoD	M4SMP8	Cyanophage	4.8e-36	35.4
WP_011954987.1|238833_239115_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_011954988.1|239266_239779_+	hypothetical protein	NA	NA	NA	NA
WP_011954989.1|239784_240537_+	chromosome segregation and condensation protein ScpA	NA	NA	NA	NA
WP_011954990.1|240564_241296_-	response regulator transcription factor	W8CYM9	Bacillus_phage	9.0e-33	37.1
WP_011954991.1|241309_242980_-	PAS domain S-box protein	Q6XLV6	Feldmannia_irregularis_virus	3.1e-12	24.9

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NC_009523|1996654:2045788|DBSCAN-SWA
GTCAAGGGGCGCTCGTATGCACAGCCGGATCCCAGGGCTTTTGCTGACGCAATATTGCGCCGAGAATAGTCAGCAGCTTGCGCATCGCAGCGACGATGGCGACCTTGCGCGGCTTGCCAGCTTGACACAGGCGCTGATCGAAGGCGCGCCTGACCAGACGGCGCCGCGTGGCCGCCAGGGTCGCCATGTACAACACGCTGCGCACATCCCTCCTGCCGCCGGAGATATGCCGGGGTTTGTGCTGTGCGCCGCTCTGATTGGCATACGGCGCAACGCCCACAAAGGCCGCCGCTTCCGTGCGCTTGATGGTCCCCAGTTCGGGCAGGCGGAGCAGCAGGTTCAGTGCGGTGATCGCGCCGATGCCGGGCACGCTTTCGCGCAGCTCCCGTTTCCGGCGCACCTCGTCGGTGCGCTCCGCCTCGTTGTCGCGTTCCTGCTCAAGCGCACGGATCTCCTGATCCAGCCAATCAATATGCTTCTGGATGCCCGGGCGGAGGTTCGGCGCGGCAGCCGTCAACCGATTGATCTCAGCCGTCCGCATCTGAATCACCTGCTCCCGCCGGACCAGCAGGTCGCGCAAGGATGCGCGCTGCTCGTCCGTCGCTTGGTGGTGCGGCGGGCGCACCCGTTCGGCAAAGCGGGCGAGCAACCGGGCATCCAGGCGGTCGGTCTTCGCCTGGCGTCCTTCCGCGTGCGCCAGGGCGCGCACGCGGCGTGGCTGCACCCGCGCCGTCGGCACGCCAGCCTGGAGCAGTTGGGCGAACACCATGCGCTCCAGCCCGCCGGTCGCCTCCAGCACAATCAGGGTCGGCTGCAGGCGCTGGAGTCGCGTGACCAGGAGCTGGACACCTTCGTCGGTAGACGGTATCGTCTCGCGTGGCGCGTGCGGGTCGGCGCCAAACGCCACATCCAGCGTCTGTTTGGAGACATCAATGCCGATAAAGAGCGACTCACGGGAAGCCATACACAGAACCTCCTGAGGAAAACGGCGCCAGCCTTGCTAGCATATGCGGGTTTGAGGGCCCAGATAACTGTTCGGCTTGGTCGCGTTGAAGGACACGGCTACCCAACACTCCGCGGCGATCTCGTGAACCTGGCGCAGAACGGTATACCGTGTCCCGTTAGATTATACTAGCACGCGAAGGGATGGCACACAAGGCGTCTGCTTTCGATGGCGGGTGCAACCCTGCCCAACAAGACCAATCTTTGTGAGAACTGCTATATTTCCGCTATCCCGCGCGAGCCGTGGGGCTGATGGAGATTGAGCATTTATAGCAGTTCTCATAGAGGTTGAACCTCCTCGGACGACCGCAGCGCATGTGGGCTCAAGCCCTCCCTGAGCGCGTGGAAGCCCCTGCGGGGCTGGCATTTCGGTGATCCTTGCCATATTGCGGGGGGGGGGACCCTCACAGGGGTAGATTTTTTGGCAAGCCCCTGCGTGCCATCTCCCGTTTCAGCCATCAGGACGCCCAAACTCCCCCTTCTCCCCTTGTGGGAGAAGGGGGCAGGGGGGATGAGGGGCAAAGGCGCGCGGGAACGCAGAACATCGCTCATCTCTCCCAAAAACTCTACACTTGAGAGGGGGGGACCGGGGTTGATCCAGCCCGCAGGGCTTGCCCGACCTCAGCCAGGGCTTCAGCCCGCCGGAGGCGAAGAGGGAACACTCCAGAAATCCAGTCAAGGGTTCAACGTACCTGAGAACTGCTATAATCCGACATGCGCTTCGTACCGTCGGGCTAAAGCCCCTGGCTATGCAAGGCGAAGCCCGCCTGCGCGGGCTATTCCAGACAAAATGTCATCCGTGCTGATCCGTCGGATCCGTGCCGATCCGTGTTCTCTTCCCGCTTCCGGGGCACAGCCCGCCTGCGCATAACGCGAACTCCAGCGGCGACCCTGTCGGCTATCGGCTATCGGCTATCGCCTATGATAAGCCCTCGGCTATGCAAGGCGAAGCCCGCCGCGCGGGCAAGAGCGGATTTACAGCATTTCTTAGAACTGCACTCTGAAGTTCTGGTGCGGTGAAACGTCTGCCGGGTCAGGCGACATGGAGCGATGCCAGCCCCGGCGGACTGGCATTCACCGTTCCGTGCAAAGCGCAGGATCCTGTCCGACGGTAGTTCGTATCATTGCGACGAAGCAACCTTCCTGCCTGGAGATTGCTCCGTCGCAATGATCGGACGCCTAGCGTGCGCCGGCCGCCTGCTTCCCGCTGGCGATGCTGGTCATCAATTCATCATCGAGTTCCGGGCTGCGCAGGTGATCGACCAGGTCCTGGATCTCCTGCGACGGCGCCGCCGTCAGTTTACTCACGATATAGCAGAGCAGGAAGTTGACCGGCATACCAAAGATGCCAGCCGCCAGGTGCGTGATGCCCAGGACGTTGAACGACGGATCGACATAGTTGCTGTACATGTAGAAGAGCGTTACCGACAGACCGCCGACCATACCGGCGATCGCGCCAGGACCGTTGCAGCGTTTCCAGAAGATGCCAAGCAGCACCACCGGGAAGAACGACGATGCCGCCATCGAGAACGCCCACGCCACCATCTGCGCGATCAGCGCCAGGCGTGGCAGCGCGAGCAGTGCCGCAATCACGGCTGCCACCACGAGCATCGTCTTGCCGAGCCAGATGCGGGTGTTCATGCTGGCTTTCGGATTGATGATGCGGTAGTAGAAGTCGTGCGCAATGGCGGACGAAATGACCACCAGCAGACCGTCGGCGGTGGAGAGCGCCGCCGCCATACCTCCAGCAGCGATCAGCGCGGCGACCGTGTACGGCAGGCCAGCAATTTCCGGCGTCGCCAGCACGATTGTATCCGGATCGATGTTCAGTTCGCTGAACTGCAGGATGCCGTCAACGCTGGTCTTGGTGATCGCCGTGCCCGACAGTTCGCCGAAGGTGCCGATCTTCTTGCCATCGACTTCGGTCTCGCTAAAGGTTGCGCCAGCCAGGTCGATCTTGCCGTTGCCGTTGGCGTCGGTGATCACCAGCGCGCCGCTCTTCACCTGCGGTGCAGCCCAGGCTGGCAGCTTATCAATGTCGCGCCCGTTGAGGGTCATGTAGTCGCGCTGCGTGATCAGACCCAGGCGGCTCCAGTTCTGCGTCCACTCCGGCAATGAACTGATCTCCTTGCCGACCACGTTTTGCAGGATTTCCCAGCGCGCGAATGCAGCATATGCAGGCGCTGTGAAGTAGAGCAGGAAGATGAAGAACAGCGCCCAACCGACGCTCAGGCGGCTTTCACGCACACTTGGCACCGTGTAGAAACGGATGAGGATGTGCGGCAGACCGGCAGTGCCCACCATCAGACAGAAGGTGAGCGCCAGGAAGTTCCACGGCGTCCCGCGCCAGTCGGGCTGGATTTCCTCGGCCGGTTTGCTGGTATCGGGGATCGACTGCGCCTTCGGCGGCGTAATGTTGACGCCGAAGTAGGTATTGATCTGATTGATCGCCGTCACAGCGGCTGCGTTGCTCAGGCCCTCGTTGTATGCGGGCACATATCCGCCCTGAATAACGCGCCCGGTACCATCGCGCGCCTTCGACTCCGTAGCGATCTTGAGCTCACTCTCCAGGCGGGTGATATTCTGCAGCGCCTGACCGTAGCTCAACTGCGGGATCGGGAAGCCGGTCAGTTTGAGCGAAAGGAAGGTCACCGGGATCATATAGGCGATGATCAGGATGATATACTGTGCCACCTGGGTCCAGGTCACCGCCTTCATGCCACCCAGGAACGAACAGACCAGCACGCCGGAGAGACCGATCACCACGCCCCATTCATACGGCACGCCGATGAAGCGCGACATAATAATGCCAACGCCGACCACCTGCGCCGTTACATACGTCAGGCTGACGATGATGGCGCAGATCGCCGCCACCAGGCGGGGCCAGCGCCCGCCATAGCGCGTACCGACGAAGTCGGGAATGGTGTACTGACCGAACTTGCGAATGTAGGGTGCGAACAGGAGCGCCAGCAGCACATAGCCGCCCGTCCATCCCATAATGTACGCCAGCCCGTCATACCCCAGCGCATAGAGCGTACCGGCCATCGAGATGAACGACGCTGCGCTCATCCAGTCGGCGCCGGTCGCCATGCCGTTGAAGACTGCTGGTACATTCCGTCCGGCAACGTAGTACTCATCGAGGATCTTGGTGCGGCTCATGATGCCGATAAAGGCGTACATCCCCATCGTCAACATCAGGAACGTCCACCCGATCCAGGCTTTAGGCATGCCTGCGCCGAGTTCCAGCGCACCCATGATCAGGGCGAAAACGATCAGACCAACGGTGAACATGCCATAGTACTGCGCCAGACGATTGTTGCGCAGTTTGACTGCTTCATTGACCGCCATAGTGGTTGCTCCCTCCGCTGTTACTTATCCCGGTCTTTCAGGTGATACTTCGCGTCCAGTTTGTTCATGGCGTATGCGTAGTAGAAGATCAAGATCACGAACACGACCAGTGAGAACTGGCTGCCGAAATAGTAGCCAAGCGGGAAGCCAGCGATCACGATCTGGTTTAACTGATTGACGAACAGCGGCGGAATGTAGGCGACCGAGAACCAGATGATCAGCAGGATCGCAATCAACCGGTTGTTCTCTTTCCAGTAGGCGTTGATCCGTTCCTGACGACTCATGTTGGCAATGTCTGACATAGCGCCTCCTTGCTCTCATGTTTCAGGCGTCGTTGCTCAAGAGGTCGATGGCTTGTCGCCTTCGCGTTCAACCAGAGACAAACCTGGGAGTTCCACCTCCTTCAGAGTCAAACCCTGGGATTTCCACCTCCTTTCGTGGTGAGGAAGCGCACTGTTGAACAGCCGGGCTGTACTACCAGGCGTCATGACACAGGTAGCACAAGGCATCCGCAGTCGGGGCGGCGCCCGGCGGTCAACAGACGATTGCAGCAAACAAACATTGTTTGCGCGGAGAGAGCTTCCTCGACTTTGGTTAAGTGGCGGTAATCAGGAATGGTGCGACTATAGTACGCAGTCTTTTTCAGCGTATGATAAATCTTCTGTAAAGTTTCTGTAAAATATGTGATGTTCGATAGTTGTGATCTACAACCCGCACACCTCAGCATACACGGCGCGCACTCGCGCGTATACGTGATCCCATGTCAGGCTGCGCAGCGTCTTTTCGCGCCCGGCGGCGCCCAACCGCCGGGCAAGCGCGCGGTCGTCGAGAAGCACCCGGATCGCCTGCGCCAGCCCGGCGACATCGCCGAAACGCACCAGCAGACCGTCACCCCCATCGGTGATGACGTCGGGAATGCCGCCGGCGCGCGCTCCGATCACCGGCACGCCGTAACACCACGCTTCGAGAAAGACGATGCCGAATGAGTCGGTGCGGGATGGGAGGACAAACACATCTGCCGCCGCCAGTGCGTCGCGCTTGACCGCCTCGGGCGCGTAGGGCAGGAAGCGGATGCGCGCGCGATCTGATTGGGGAAGGCGTGCATAGAATGCTTCGAAGTGCGCCAGCGGCGCACCGATGAGCGCCAGCGTTCCCGGATGCCCTGCGCGCCACAAACGCTGCATCGCTTTGATCAGGTGGATGGCGCCTTTATCGTATGCCAGCGCGCCGATGAAGAGCACAAGCGGTCCGTCGATACGCTGTTCGGCGCGAAAACGGTCGCCGTCGCCTCCCTGAAGGTCTTCCGGTGCCACGCCAACCCCCACCACCCGGAGTCGTTCATGCGTCACACCGCGCGCCGCCAGAAAATCGCGTTCCAGTCCGGTCATCGTGATGACCCGTTCGCTTCTGCGAAGCAGGTCGATCTGATGACGCATGCTGTAGTACCGCACAATGGCGCGACTCCCCGGCTCTCCCAGGTGGATGAACGGCGTGCAGAGGAACGGGATGCGCTGGCGCTGTGCACAGGCAAATACCGGCAGAAGGGCGAAATCGAGCGTAATGTTCGTTGCATGCACCAGGTCGAAGGGTCCGTACTGCTCGAAGAACGTCTCAACGCCGGGCCAGCGCGGCGTCCAGGTTGCAAGACGTTGCAGCAGCGGCGTTGTGTTGGGCAGGCGCGAGATTTCTGTCATCAACCGGCGTATCACCGGGTAGATCAGGGGTGGTCCTGGTCGGCGAACGATGGGCAAACGCACGATCTGTACGCCGTTGAACCATTCGGTTGCGGTTTCAACCCGCCGGCGTCCCGGCATCCAGATGTGTTCGAGATCGTGGGCGTCGGTGGCAAGAACGGTCACCCGATGCCCTTCGGCTGCCAGGCGCTCGCCAATCGCGCGAAAATAGCGCCCTGCGCCGCTGGCAACCGGGTGGTAGAGCTGGACGACATGCAGGAAATGCACTACTTTCCCCAACTCAACCCGGAGTCGGCGTCAGCGCGCAGCCCCATGCTCACCTGTCGCGGTGAAGACGCCTGGATGCTGTCGCCGATGATACGGATGTCTGCCACCCACAGATCGAACCCGGTCTCGCCTGGAGCGACTGCCAGGAATGCAATCCGCCTTCCATCCGGTGAGAAAGCGGGTGCGCGTGCGGTTCCCAGACCGGTCAGACGCACAATGGTTCCACCCGCTGCCGGAACGGCAAAGATGTCGGTGCGGTCGCCATCGCGACCGGCGAATGCCAGCCAGCGCCCATCGGGCGAAAACGCCGGATCGTAACTGCCTGAAGGAACATCGGGTTGGGGCGCTACCGTGCCGGTGGTACGGTCGTAGCGCATGATCTGCGATGAACCGCCAGCATACGCCGGTTCGAGCGTAAACACGATTGCTGAACCGTCGGGAGTATGCGTCACCCGCCCGACGTGACCGGTATCATCGGCATAGATCAGGCGGCGCACACCGCCGGGTTGCGCCGGTATGGTAAACAATGCCAGGTGATATTCCGCTGCTGGCGAACCGGAAGGCGGCGCGTACTGCGACGCATATGCAATAGTTTGACCGTCGGGCGCGAATGAGGGATAGAATGCCCATACGCTGTCGGAGATACGCTCGAAACTGCCGGGAGGATGCCGCGAGCCGTTGTTGGTCAGGCGCAGCGGTCCGCCGCCATCTAGCGGTGCGATCATCAGATCGCTCGAACTCTGATCGCGTTGAATATATGCAATGGCGCTCCCATCCGGCGCCCAGACCGGCTGAACCGCCTGATCGTCCCCGATCAACGGGCGTCCGGTCTGATCCTGCCACATCCAGATCGTACCGTCGCGAACGAAGAGCAACCGTCCAGGGAGACGCACACCAGCGGCGATAACCGTCGGTTGGGGTGCGCCGGGTTCTGGTAGCGGGGCGGTGGCAGGCAGGAGCGCCGGTGCGGGTGTGGGGTTGGGCGCTGACGATGCGCATGCAGTCAAGAGCATGATCACCAGACAGATCACCGGGAAGCGCATAGTCATACCTGATGCGGCGGGACCGGCGCGCCGCGCCGCCCTGGAGCGTCCGAGAATGCCATACGGCGGGCGAACCAGCCAATCACGCGTTGCCACATGCGGCGTCGGCGGGGCGGCGCGGCGCGCAGCAGGTCGTCGGCTGGCGGCGTTTGCGGCAGCAGGGCATACAACGCGCCGGGTGCGACACTGAAGGTCATGGGAGTCGAGCCGGACTGATCGCCATCGACCTGGACCGGCAGCGCGCCGCGGGTGTCGATGTGAACGACGCGCGCGCGGTGGTACTCGATCCGCGGATCCAGGTTGTACCGCTGACGCAGGATGGAGAAGAGGCGCAACGGCGCTTCCGCCAGGCTGTCGCCTTTGATGATGCACACATCGAGCAGTCCATCGTCAATGCAGGCGCGCGCTGTGATCTTGAAGACGCCGCCGTACAACTGACTGTTGCCGATCACCACCAGCAGCACACGCCCACGAATGATGCGCCCATCGAGCGCGATGCGCGCGCGCCGCCCCCGATAGCGCAACGCCAGGTCGAAGGCGCGCACCACGTATGCCAGCGCCCCCAGGCGTCGCTTTTCGTCGCTGCGCACTTCGTTGACAACCGCAGCATCGAAGCCGATGCCTGCCATCAGCAAAAAGTATCGGTCGCCCGCGCGCCCGAGATCGATGCGATGACGACGGGCGTGCAGCAGCGCTGCTGCTGCGGCGCGTGGTTCGAGCGGGAAGCCGAGTTCGCGCACCCAGACATTGACTGTGCCGATCGGCAACGCCGCCAGTGCGGTGCGCGTTCCTGCCAGACCATTGATAACCTCGTTGATCGTACCGTCACCGCCGGCTGCCGCTACGACGTCGTACCCCTGCTCCGCCGCTTCACGCGCCAGGCGGATGCCATCGCCGGGTTGGTGCGTCATTTCCACATCGACCGTCCATCCATGCGTCAGCCAGACGTTGCGCGCCTCTTCCACATTCTGGCGCAGGGAGGAAGCCTGTCCGGCATACGGATTCAGAACGATCAGCGCCCGCGCATCACGCGGCAATCCATCGCTGCCGTCGAGCGAGGTCGGCGCTGCTTGATGCAGGGCAGTGAAACGATCCAGGTTACTCATCCTCATCATCCTCAGTATCGGAGGATGGCGGTCCGCTACGGATCGTGCCCGGCGCTTCGATCCAGCCGCGGCGCAGCGCGTAGAGCACTGCCTGCGTCCGATCGTTCAGCGAGAGTTTGCGCAGGATCGACGAAATATGGTTCTTGACCGTCTGGGTGCTGATGTGGAGTGCTTCGGCGATCTCGCGATTGCTGCCGCCGGCTGCGATGCGTTCGAGCACCTCGATCTCCCGATCGCTGAGCGGCGTAAAGAGCGGAAACTCAACCTCCGGCAGATTCGTCAGGTCTTGCGGGAGATTACGGAACTGCGACAGCACCCGCCCGGCGACTTTCGGATCGTCGAGCACCACATCGTTGATGACATACTCGCCGCGCGCCACACGCCGTAGCACCTGGGCAAGTTCGGCGGGGTTGACATCCTTCGAGCGGTACGCCGACGCACCGGCGCGGAGGGCATTGAACGCCTGCTCATCGCTTTCGTACACGCTCAGGACCACGATGCCCACACCAGGGTAATTGAGCCGCAACTGACGGGTCAGTTCCAGACCGTTCATCCCCGGCAGGTTCAGATCAACAACCACCGTGTTTGGTTCCTGGTTGGGTGGGGCGGCATTCATCCACGCCAGCGCCTCCTCGCCGGAAGATGCCTCTCCGACAACCAGAATGTCCTGATAGGTGGAGAGCGCCGCACGCACTCCCTGGCGGAAGAGCGGGTGGTCGTCGACGATCAGCAATTTTACGGGAGGGTTGACGGACACGACGGAGTCTCCTTTCCCTGATCACGCAACCAGCGCCGATATCCTTCGACTGGATCACGCAAACCGCGAATGCCAGCCGCGCTGAGGATGCGGTAGGTTTCGACCAGCGGCAGACCGACGACACAGGTATAACTGCCGGTCACCGCGTGCACCAGTTGACCGCCCAAACCCTGGATGCCGTAGGCGCCGGCTTTATCGAGCGGTTCGCCGGTTGCGACGTACGCATCGATGTCGGCATCACTCAGCGGAGCGATGCTCACCTGACTGGCGACCAGATCGAGCAACGGCGATGCGTCTGCGCGCCGGGCATCAATGACTGCCAGACCGGTATAGACCGTATGCGTTTTTCCCGCAAGGCGGCGCAGCATGCGACGTGCGTCATCAGGATCGACCGGTTTATTGAGCACCGTGCCTTCAAGCGCCACAATCGTATCAGCGCCGATGATAACACTATCGGGCGCTGATGCGCAAGCGGCATGGGCTTTGCGCCAGGCGCGCAACGTCGGATGGTCGAACAACGGCAACGCCAGTGGCGGCAGCGCAGCGACAATCTCCGCTGGCGGGTCGTGTTCGTGCTCCTCGGCATCCGTGGCGATGATCCTGAACGGCACGCCCAGGTACGCGAGCAACTCACGTCGGCGCGGCGAGGCGGATGCCAGGACCAGCGGCGGCGATGATGGAGTGTCGTCAGTCGTGGTCATAGGCGGGTTGCACCGGCAGTCTGTTGGTGACGGAACGCCTTCAATTCGGCGAGTCGCGCCTGACTCATCGCGTCGAGGGCGCGTTGCCAGTCGTCGCGGTAAGGTCGCAGGGTTTCAACCAGCACCTCGCTGATCGCCAGGTCGCGGTACCATTTCCGGTTCGCCGGAATAATATACCATGGCGCATACTCCGTACTACAGCGGGTCAGCGCCTCTTCATACGCCGCCATGTACTCGTCCCAGCGTTCCCGCTCACGCCAGTCGCCAGCCGAGAGTTTCCAGGCTTTTGTTACGTCCTGCTCCCGCGCCAGCAACCGCTTTTCCTGCTCGTCTTTGCTGATGTGCAAAAAACATTTGACGATAATCGTGCCGGTGTCGGTCAACAGGCGTTCGAACGCATTGATCTGATCGTAGCGCGCGCGCCAGACGTGCTCGGGAACGAGCGAATGGACGCGCACAACCAGAACATCTTCATAGTGCGAACGATTGAAGACGCCGACCATCCCTTTGCGTGGCACGACTTTATGCACGCGCCACAGGAAATCGTGGGCGAGTTCTTCTTCAGTAGGAACCTTGAACGACTCGACCCGACACCCCTGTGGGTTGAGGTTGTGCATAACGTTCCGAATAGCGCCATCCTTGCCAGCCGTATCCATTCCCTGCAGAATGAGGAGCAGCGCGTGGACGCCAGCAGCGTACAGTTCTTCCTGCATGGCGTCAAGGGTGGCGTTGAAGCTGGCGAATCGCTCCCGCCCCTCGTCCTTCGTCAGCCCGCCGCTGGCATCGGGATCGATGTCGCGCAGGCGCACCTGCGTGCCTGGAATGACGGTATGGGCATAGTGCATACGACGCTCCCGTTGCGTGCTACTCACGCCGTTGCTGTAATCGTCGTCAGCGGCACGTCAGTCGTCAGGGGCAGATCGATGCGACCGCGACGTCGGCTCGACTCATACGTTGCGAAGATTAACTCTGTTGCCTGCAATGCGCGCCGCGCCGATACTTCCGGCTCGCGCCCGCTCTTCAGCGCATCGATGAGATCCAGGATCGCGCGCGTATGACAGGCTTCGTCGTGCAACCCTTCACCCACGTCGATGTTCTGCCATCCTGATGCGCTGCGATTCCAGAGGCGCAACGGTGTATCGTTGCTCTGCCCGATCTCGATCAGTCCCTCATCGCCGTACAACCGGATGATGAGTGGAGGAATGGCACTGTCGCCTGTCAGCAGCATGCCGGTGACCCCGTTGCGAAAGCGGAATTGGCTGATCCCCTGACTCTCGACGGTCACACCAAAAATGGTTTGCGGTTTGCGCGTATCGATCTGACCAATGACCCATTCGACCGGAGTTTCATCATTGAAGAAGAACAGCATATCGAACCAGTGCGTTCCCCAGTCGAACAGATTGTCGCACGTCGCTTCCATACGCTGCAATGTGCCGATCGCACCGGCGCGCAGCAGATCGCGCGCTGCCCGAAATGGCGCGCCAAAACGTCGCTGGTGGTTGAAGGTCAACTGTGTGCCGCTGGCTTCGCATACCGCGACCATCCGCTTTGCTTCGTCGAACGATGGCGCCATTGGTTTTTCGCAGTGAACGGCGCGCACGCCAGCTTCTGCGCAGGCAATGACCATTTCGGCATGGAGGTGGGGCCAGGTGCAGATGCTGACAATATCGAGACGTTCCTTTGCCAGCATCTCACGGTAGTTCTGATACACAGCATCGCCGCCGTGTTGCTCCTGAAACGACCGTGCATGATCGAGGTTCAGGTCCGCCAGGGCTACCAGGTGCGCATCAGGAGCGGCGCGATACCCTCGCGCGTGCATATGCGCCATGCCGAACCCGGTTGCGCCAGCGGAACGCCAGGGTTTACCGGTGCCGATAATACCAACCCGATACATTGTTGTGGTGCTCCCCTGATCTCAAGAATTGCGAGGTCGGCGACGGCGACGCTGCCGCTGCGACGTGGATGATTGCGATGCAGTGTCTGGCGCGGATGGCGTCCTCTCGTCGGTGCGCGTCCCGGAATCGTGATGATGCCCGGCGGATTTCTTTGGTGATGGCGGAGCAGCCGAACGCTTCGATGGTTGGGGAACCATGGGCAGATCGTCGGACAGCATATCGAGGTCTTCCTCTTCGAGCAGTTCGAGCGGCGGATCACCGGCGCCTTCTTCGAGCCAGGCCAGCGCCTCGAGCACGTCTGGATTATCGATCGAGTCGCGCAACAGCCGCTTTTCGCCCCGCCGTTCCTGTTCAGCGCGACGTTCTGAGCGGTTCAATCTGGCAGCTGGCGTGATCCCCTCGGCATTGCGACTGCGCGCAATCTCGCCGACCTGACGGATAGCTTCCTGAATCTGCGTCGGTGAAAATTCTTCCTGCATCCCGGTGCTGGCAAGCGCAACGATCACCGTCTCACGCAGCACATTGACCCCCACTACCTCACCCGGTCCGTCCGGCGTCTGCACCCATGTGCCTTTGCGCGGCATCCGGCTCTTGACGCTCACGTACTGATCATGTTCGTAGGAAAGGCAGCAGAGCAGGCGTCCACACACTCCGCTGATCTTCGTCGGGTTCAGCGGGAGGTCCTGATCCTTCGCCATTTTAATCGACACGCGCGCGTAGTCGGGAAGGAATGTGGCGCAGCAGAGCAGGCGACCGCATGGACCGATGCCGCCCAGGAGTTTTGCCTCGTCGCGCGGACCGATCTGGCGGAGTTCGATGCGGGTGCGAAACGCGCGCGCCAGATCGCGCACCAGGGCGCGGAAATCGACGCGTTTTTCAGCGGTGAAGTAGAAGGTCAATCGCGAGCCGTCGAACGAATACTCGGCTTTGACCAGGCGCATCGGCAGTCCGTGTTCCTGGATTTTTTCGGCGCAGCGGGCGAGCAATTCGTCCTGATGACTGTTCAACTGGCGCAGACGCTCGAAATCGATCGGTTCTGCGCGGCGGAGGACCGGTTTCAGTTCACCGACGATCTCTTCTGGATCGACCAGTCGCGGTGGATAGGCGACCTTTGCAAGTTCCGGGCCGCGTACCGTTTCGACAATCACGTGGTCGCCCTGGGATAATGCTTCAATGCCATTGGGATCGAAATAGTAGGTCTTTCCTGAGTCCTTAAAACGAATACCGACCACAACGGGCATAACAACCTCATGTTCTTTCTGCTAAACTCATGTGCAATGGCGCTTTGGAGATGCTGATTTTACCCTCTTTCCCGCCCCAATTATACGCCACTGCCAGCGACCCGGATCAGCGCGTCTCACGGCGCGTTCATCGAACCGATCGCGCGGGATCGGCGCGCCGGTGCGCGACCGATCACTTTATACGTGTGAACGAGTTGCGCTTTGCCCTTCAACTGGTAATCGCCCATCTCCTGGAGAATGAACGCATCCCCGATAGCGTTGCGCGTCGCTTCGGAGATCAGCACCGAATTGAGATCGGCGCGACTTTCAAGACGTGCCGCAGTGTTGACGGTATCACCGATCACCGTGTACTCCAGGCGCTGACGGGTGCCGAAAAAGCCGGCGTAGACCGGACCGGTGTTGATGCCAATGCGAAAGTCGAATGCTTTGGACGGATCGAGTTTTTCGATCAGGCGACGGTGCGCTTCGATCATGTCAAGCGCAGCATCGACCGCCTGGATGGCGGTGGTGTGATAATCCTGGTATTCGTTCACCTGCGGCGCGCCAAAGATCGCCATAATCCCATCGCCGATATATTTATCGAGCGTGCCGTTGTGCTGGAAGATAACCTCGGTCATTTCGTGGAGGTACTCGTTGAGCAGGTCCTGCACTTCGCGCGGCGAGAGGCGCTCGGAGAGGGATGAAAATCCCTTGACATCGGCGAAGAGAACGCTCACGATCAACTCCTGCGGTTCACGCAGGCGACCGTGTTCGGAGAAGTAACTGGCAACATCGCGCGCCACGCTGGGGGAGACGAAGCGCTCGAACAACTGGCGACTGGCCTCCTGTTTTCGCAGTTCTTCCGTCAGCCTGGCGCGCTCAATCGTGACCGCCGCCTGGTTGGCGATTGCCGCCAGCAGGTCGCGCTCACGTGAACCGAACCGGTCGCGTCCGGGGGAGTCCAGGTAGATCAGCCCGATTGCGCCCTGTTCCACCAGGAGGGGGGCGCACAGCGCCGAGCGAATGTTCGCACTGATAATGCTTTCGGTGCCGCCAATTTCGAGGCGTGCGTCGCGGGTGAGCACCACTTCGCCAGCTTCGAGCGCTTTGCGAACGATAGTCGAACTGATGACCACCTCCTGGCGCGACGGCGGATAGATGACCCGCGGCACGAGTTCATTCTCGCGTTTCAGCAGCAGCAGGGCGCGCTGCGCCGGGATCAGACGGAGCACCTCTTCGACTATTGCGTCGAGCAACTCGCCCATATCGATGATCAGGTTGAGGCGCCTGGCGATGCGGAAGAACTCGCGCAGGTCGATGTTCAGTTCTGGTACGACGACGCCGCTTGCCTCAGATGCAACCGGGAAGTAGCGACTATCATCGAGAACGACGTTCTGTGCTGCGCGTTCCTCGAAGCGCAGTTCGAACGGACCGATCTGAACCACGTCGCCGTCGCGCAGTTGCTCTTCTTTGATCCGCAACCGGTTGACGAAGACGCCGTTGCGACTGTTGGTGTCACGCACCCATACATCGCGCCCATTCACGACGATTTCTGCATGGTAGCGCGACACAATCGCGTGGTTGAGCACAATATCGTTCTCCAGCGCACGCCCGATGCGTAACCCGCGCGCTTCGATCGGGTAGGTCTTGTGCTCGCCGTTGATGTCGAGAGTGATCAGCGCCATGGTACGGTCTCCTGCGTTCCGAACAGCGCCGGAACGAGCATTGCCCTGTACGCGCCTGTCCTGTTAGTATAACAGACGCCATGGCGTGCGGCAATAAATATTATATTATGATGAGGCGTAGGGGTGCAGCACCGCTGCGCCCCTACGGTGTCGCACGTCGCGCGATCAGAACGCCACCCGCCAGCAAGATCATGCCCAGCACCGCCATCCACGGCGCCTCGTTCGATGCGCCGGTAGCCGGAAGCGTCGCAGGCGGCGGCACAGGCGCAGCATCCCCTGATGGTTCTGGCGCGGCCACTCGTGCCGGACTGCGAAATGCCATGTCCTGTCGGGCAGTCTCGCCTTCCGGCAGGGTGATCGGGATCGCCCCCTGGACGGATGTTCCGCGCTCTGGAGGGACGATCAGTTCCACGACATACGTTCCCGGCATCAAGTTCTCGCGCCCGTAATTTCCGTTTGTGTCGGTCAGCAGTTCCTGGTCATTGATGCGCACGGTCATCCCCGCGACAGGTGCGCCGGTCGTCAGGTCGATGACGGTTCCGACGATCCGCCCCAGACGCGGTTCACGACGAGGCTCTTCCGAAGCGACAACCGGCGTCAGCGTCGGGCGGGGCGGCAATTCCTGCGCCTGCATTGGGCGCGACGCGATGACGATCGATCCGATGCTCCACAGGAGCAACCATCCTCCGGCAATCATCGATATGGCGGTTATGAGTTGCCTGGCGTTCATATGTGTTTTACCTTTATGTATCAACGTTCAATCTTCCCGCCCGGTCGTGCATACGCCGGTCGATCCGGCAGGAGCGACGAGTGCGCTGGTCCGGCAAGATACGATGGCGTCCATGGCGGCGCTGGCGGATTGGTTCCGCTGACGATCAGACCGTCGCGTATGCCGCGATTGTTCGTTTCGTCAGACTCGAATACCGCGCCGCTCACGCCGACCGTGTTCCAGCTATCCGCCAGGGCATAGATCGTCGTTGTGTCATTTGCCAGCCAGCCGAGCCAGTATGTGCGGAGCGCATCATAGCCGCCGCTCGTGCTGAGGGTGATCTGCTCACCCGGTTGCAATGCCTGCGTGACCCCCCATGCAACGCCGAAACAGGGTTGCAGTGCGCAGCGGTCGTGCCAGAGATCATTCACCCGTGGCGGACGATCCGGGTTGAGGTACAGATCGACCCAGAACGGTCCGGCAGGCGCAGTGCCGACATTCTTCACCGTCACCCGAATCTCGACCAGTTGCCCGGCAGCGAACGTTGTCTGGTTGGGAATGATCTCGATGCTGGCGATGATCAGGTCAGGCTGCCCTGGTCGCATGATCAACGGCAGATATGCCTGCTGAAGCGACGGAGTCGCAGCCGTAACAACGCCGCTGATCGGAAACCGGAACGGACTCTCATCGGCGTCGCCGTTGACGAAGGAGAGCGTACCGCTGAAGGTTCCGGCAGTCGCAGCCGTCAGTTGCACCGTAAACGTGACCGTCGCGCCGGGAGCGACTGGTCCTCCGGGAAAAGCGCCGACGACCACAAAACCGGCAGGAAGGGTCAGTGCGCCGAGGGTCAGCGGCGCGGTACCGGCGTTGCGGATGGTGAAGACGCGCGCGACCGGTGCGCCGACGGTGGTCGTTCCGAAGGAGACCGCCGTCGCCTGATTGTTCGTCAGTTCCGGGCTGCTGGCGTCAGGACCGTCGTACACCGCGATTTCAGGCGCAGGTACCGCCTCAAATGCGCCAATATCGCAGGCGCTGCCCTGTGGTCGAGAAACGCCGCGCTGATCGGTCGTCACGCTGCATGCACTCGCCGGAATCTGATCCAGAGCTGGCGAACCTCCCGTCAGCGCGTGGGTTGGCGTCGGACCGCCATTGCTGGCGAGCGGCGCAAGCAACGGATTGATCGGTGTTGACGACTCAATTGCGCCGGTGTTCGGTGTAGTGGTTCCGACAGGATCGCCGTACTGATCGCCAGTGGTGTTCGCGGCGAAATCATAGTTGCCGACATTCCCGATGAGATTGTATCCGTTGCTGGAAAGAGAGCCAGCGATGTCGGGATAGTTCTCGCCCCCGCCCGGCGACGTGTCGGCATTGCCGGCGATCAGAGAACCGCGCAGCGTGGCAGTGCCGTACAGCGCGCCGTTGCCGCCGGTTTGCGTCCCGGTCATCGTCACATGTTCAAGTTGAGCTCCCATATCAGAAAACAGCGCGCCGCCGTTGTCACCAGCCTGATTGCCGCTGAAGGTGCTGTTGCTGACAGTAACGTCGTGGTATGCCGCGATTGCCCCGCCTTCGCCCGTCGTCTGGTTGCCGCTGAAGGTTGTGCCGGTCACCGTTGCGGGATCGACGAAGCCATCAGTACGGAACGTGATAGCGCCACCGCTCCGCTCCGACCGGTTGTTGCGAAAGATGCTGTCGGTAATGGTCGTGGTTGCATTAACCGTGTAGAGTGCTCCACCTTCGGCGCTGCCAGCAGTCAATGCGCGGTTGTTCTCGAACAGGGCGCGGTTGAGCGTCAGTTCAGAGTTGCGCGCAACGACGGCGCCGCCGTCAAACGTCGCCTGGTTGTTCTCGAAGGCGACGCGGTTGAGGGTCAGTCGGGCGTTGCGCGCCAGAATTGCGCCCCCCTCGTCGTTGTCTGTATCGCCGTTGCGGAAGGTCAGGTCATTGATCGTCACCACAACGGTGTTTACGAAGGTTTGATCGCGAAGATACAGGAATCGAAACGGCGGGCTTCCAGCCACGCGCTCAATCGTTGCGCCATTCCCGTTGATTGTCAGGCTGTTTGTCGAAGAGCTATCAACAATAATGACCGGCAATCCGTTTGCTGATCCACCAAACGTATTGTCAACCGTCGCCAGCGAGTAGGTGCATCCGGCGGCAAGTTCGATGGTGTCGGGCTGATTATTGCTGTTAGCGGTGTTAATGGCTGTGATGAGCGCCGAAACGTCGCTGCACGGAATGGTGAACGTTGCAGCGCGGCTGACGGGTATGGCGAGGAACCAGCCGGTGGCGAGGGTCATCACAAGGAGCAGCACCACGAGAGAAAAACGTCTGGATGGGCGCATGTTGCACTCCTGGCTGCAATGTCTGATTGTTCGGTCGGCGGGGGATCATGCTCAATAACTGGCGACACATGACGCTTCGGATCGTCCATCCTGGATCACTCCAGGAGCGTGTGCGCCGATGCGTCAACCGGAAGCGGTGCGCTGCATGCGCCTGAGGAGCGTCGCTGGATGCGGATTGTAGCGAAATCTGCGCCATTATATACAATGTTCGCGGTGCGGGTCAAGCATGCGTCAACGATCCAGTATAAAACTCCTGGCGTTGTGCTATAATTCTGGCAACGTATTCTTAATGACATTATCCGATTGACGCTTTCATCTCCGCTGCACCGATGCCGGTTCGCTCCAATGTTCGTTTCGCCAGATGCGCGCAGTGACGCCGACCGGCGAGCGCGCCAGCGCAGCGGAAGCGGTTCCGCACCTTTATGACAGGCTGTCCTTTCCTGTCTTGTGACGCGCTGTTGTTGAACGATGCAAGCCGGACGCGCTATGAACCAAGGGATAGCAGTTGATCTGCGCAATGTCGTCAAGCGATTCGCAGATGTCTGCGCCGTCGATCACGTCTCCATGCAGATCCGCGACGGTGAATTCTTCTCGATGCTCGGTCCCTCCGGTTGCGGCAAAACCACTACCCTGCGGATGATTGCCGGTTTCGAGTTTCCCACGTCGGGCGATATCCTGCTCCACGGCAGATCGGTCGGAACCACGCCACCCTTCCGGCGCAATGTGAATACCGTCTTTCAGTCGTATGCGCTGTTTCCGCATATGACGGTGGCGGAGAATGTCGCCTTCGGTTTGCGCATGAAGAAGGTTCCGCAATCCGAAATTGCGCGGCGGGTGACCGAGGCGCTCGATATGGTGCGCCTGGGTGATTTTGCCGCCCGCCGTCCCCGTCAACTCTCCGGCGGTCAACAGCAGCGAGTGGCGCTGGCGCGTGCGCTCGTCAACCATCCCGAAGTGCTGCTGCTCGATGAGCCGCTCGGTGCGCTCGACCTGAAACTGCGCAAAGAGATGCAACTCGAACTGAAAAGCCTGCAAGAACGGGTCGGCATAACCTTCATCTATGTCACCCACGATCAGGAAGAAGCGCTGACGATGAGCGACCGGATCGCAGTGATGAGCGCCGGGAAGGTGTTGCAGATCGGCACGCCGACCGAAATCTATGAGCGCCCGGTCTGCCGTTTTGTCGCCGATTTCATCGGCGAGACCAACTTCATCGAAGGAAAGGTCGAAGCGGTTGAGCGCGATGGAATCGCCTCCATCCTTTCCGATGACGGGTTGACGCTGCGAGGGCAGACCATCCGCCCGGTTGCGTCGGGAGCGCACGTCACCCTCTCGATCCGTCCAGAGAAGGCGTTCCTTTCAGTGCAGGCGCCGCCGCCCGGCACGCCGAACTGCTATCAGGTGCGGGTGGAACGGGTGGCGTATATCGGGAGTGATACGCGCATCGATGTGCGCTTGGGATCGCGATTGTTCGATCTCTGGGAACAGAACAGTCGCTCGACGCTCGACCGCGACGCCTACTGGCAACCCGGCGAAACAGGGTATCTCTGGTGGCCCGCCGAAAATGCGATTATTCTGACCGAGTGACCACGACCGCGCGAGGTGACGATGGCTGCTGATACGCTTGCTTCCGACTCTCAACCGCGCGAGGGGCGCATTGCCGCCATCCTGCGCCGTAACGAGCGACTTCAACTCGGTCTGCTGCTGTTCCCCGGTCTCTTCTGGCTTGTCATGTTCTTCGCACTGCCGCTCATTGTGGTGGTGTTCTACAGTTTCGCCGTCAATGGTCCTGGCGGGCGGATCGAGTGGACGTTCACACTGGAGAATTACCGCATCCTGTTCACGGAAAGCCTGTACGTCAATGCCTACTGGCGCTCGATCTGGGCGGGGGTGTGGACGACGCTTATCTGTCTCCTTCTGGGCTATCCACTTGCGTACTACATCGTCCGCAGCCCGCCGCGCTGGCGCACCGTGTTGCTCTTTTTGATCCTGATCCCGTTCTGGACCAACTTTCTGGTGCGCACCTACGCCTGGATGCTTCTTCTATCAAACAATGGCATCATCAACAGCGCCATTCAGTCGCTGGGTCTGCCGCGCGTCGCGCTCTACCCGTCCGAAGGGGCAGTGCTGGTCGGTTTGATCTACGGCAGCCTGCCATTCATGGTGCTGCCGATCTACGCCTCGCTGTCACGCTTCGATTTTACGCTGATGGAAGCAGCCGCCGATCTGGGCGCCAGCCAGGTGCGCGCGTTTCTGAAGGTGATGCTGCCGCTGACGATGCCGGGCGTGGCTGCCGGGTCGGTTCTGGTGTTCATTCCGACGGTCGGGCAGTTTGTGGTTTCCGACCTGCTCGGTGGGGCGAAGGTCGATTATTTGGGGAATCTGCTGCAACGCCTGTTTACCCGCTCGAACCCGCCGAACTGGCCCCTGGGGTCGGCGATGGCGATTGTCTTTATGGTTGTGTTGACCGTGGCGATTATCATCTATTTCCGCGTGACGACCGAGGAGGATCGGTGAAGGTTGAAGGTTGAAGGTTTGGAAGGTTGAAGGTTGCGCTGGCGTCGTGTGTATTCGTCAGGGCGTTTGTTTATTCGCCAGCGGAACCACGGAGTAACTGTGTTGCTTGTCAAGGGGCGCTCGTATGCACAGCCGGATCCCAGGGCTTTTGCTGACGCAATATTGCGCCGAGAATAGTCAGCAGCTTGCGCATCGCAGCGACGATGGCGACCTTGCGCGGCTTGCCAGCTTGACACAGGCGCTGATCGAAGGCGCGCCTGACCAGACGGCGCCGCGTGGCCGCCAGGGTCGCCATGTACAACACGCTGCGCACATCCCTCCTGCCGCCGGAGATATGCCGGGGTTTGTGCTGTGCGCCGCTCTGATTGGCATACGGCGCAACGCCCACAAAGGCCGCCGCTTCCGTGCGCTTGATGGTCCCCAGTTCGGGCAGGCGGAGCAGCAGGTTCAGTGCGGTGATCGCGCCGATGCCGGGCACGCTTTCGCGCAGCTCCCGTTTCCGGCGCACCTCGTCGGTGCGCTCCGCCTCGTTGTCGCGTTCCTGCTCAAGCGCACGGATCTCCTGATCCAGCCAATCAATATGCTTCTGGATGCCCGGGCGGAGGTTCGGCGCGGCAGCCGTCAACCGATTGATCTCAGCCGTCCGCATCTGAATCACCTGCTCCCGCCGGACCAGCAGGTCGCGCAAGGATGCGCGCTGCTCGTCCGTCGCTTGGTGGTGCGGCGGGCGCACCCGTTCGGCAAAGCGGGCGAGCAACCGGGCATCCAGGCGGTCGGTCTTCGCCTGGCGTCCTTCCGCGTGCGCCAGGGCGCGCACGCGGCGTGGCTGCACCCGCGCCGTCGGCACGCCAGCCTGGAGCAGTTGGGCGAACACCATGCGCTCCAGCCCGCCGGTCGCCTCCAGCACAATCAGGGTCGGCTGCAGGCGCTGGAGTCGCGTGACCAGGAGCTGGACACCTTCGTCGGTATACGGTATCGTCTCGCGTGGCGCGTGCGGGTCGGCGCCAAACGCCACATCCAGCGTCTGTTTGGAGACATCAATGCCGATAAAGAGCGACTCACGGGAAGCCATACACAGAACCTCCTGAGGAAAACGGCGCCAGCCTTGCTAGCATATGCGGGTTTGAGGGCCCAGATAACTGTTCGGCTTGGTCGCGTTGAAGGACACGGCTACCCAACACTCCGCGGCGATCTCGTGAACCTGGCGCAGAACGGTATACCGTGTCCCGTTAGATTATACTAGACGCCGGAGGGCAGCGTGCGTTATTGATTTGCGCATTCGCGCATTCGCTGGGGACGTTCGTTTCCCTGCTGTTGGGAGTCTGACCATGGTTGATGTTCAAATGTCGCAATCGGTGCGTGTCGCAGGATCTGAACGTCGCCGTTCGCTCGGATCGCTGGCGCTCAGTGCGCATACTGCGTTGACCCTGGCGTTTCTCTATGCGCCGATCGTGGTGCTGGTGCTCTTCTCGTTCACGCGCGACAGTTTCGGTGTGCGATGGACGGGTTTCACCTTCGACTGGTATGTGCGCCTGCTCGCCGATCAGCGCCTGCTCAACGCTGCAATGAACACGCTCATCGTTGCGCTGATCTCCACCGTGGTTTCGACGGTCATCGGCACAATGACGGCGCTGGCGATGGAACGCTACCGTTTTCGCGGACGCACTGGCTTCGATGCCCTGCTCTACCTGCCGATCGTCATCCCTGAAATCGTCATGGCGCTGGCGCTGCTCGCCTTCTTTGCCTTCTCCTTTGGCCTGCTCGAATCGCTGTTCGGCGTTCGTTTCCAGTTCGGGCTGGCAACGGTGACGATTGCGCACATCGCCTTCACGATCTCGTTCGTGGTTGTTGTGGTGCGCGCCAGCCTCAAGGGGTTCGACATGCGCCTGGAAGAAGCAGCGCAGGACCTCGGCGCGAACGAGTGGCAGACGTTCCGCTACATCACGCTGCCCCTCATCATGCCAGGCGTCATCGGCGGAGCGCTGCTCGCATTCACTCTCTCACTCGACGATTTCGTAATCACCTTCTTCACCACCGGTTCCGGCGTATCGTTGCTGCCGGTCGAAGTGTATGGGCAGGTCAAACGCACCATTACGCCAAAGATCAACGCAATCTCGACGCTGATGCTGCTGATGTCGATCACGCTTGTGTTTCTCTCACAGTTCGTGCAGCGCAGACGGGAGTGACGGGCGACGTCGCTTCTCGGACGCAGATTAAAGCGATCGCAACGCTAGAAAGGCAGGAAGATGCTGAAAAGACGAATGAGATTGGGTACACTGCTGCTCGTGGTGCTGCTGGCGCTGGCAGCGTGCGGCGGACAGCCGACCGGAAGCCCTGGCAATGAGTATGGCAGCGGCGGTGCAACCGAGCCGACCACGGCGCCCGGCGCAACGCAACCGCCAGCTGGCGATGAGTTGCAGGTTGATCGCTCCAGACTCTCGCGTGAACTCAGATTCTTCAACTGGACCGATTACATCGATCCCTCGATCCTCGAAGACTTCGAGAAAGAGTATGGCGTCAAAGTGATCGTCGATCTGTTCGACGCCAACGAAGACATGCTCGCCAAAGTGCGCGCCGGTCGCTCCGGCTACGACATCGTCACCCCCTCGGATTACGCCGTCGAGATCATGTGGCGCGATGGACTGATCGCAAAACTCGACAAATCGCTGCTGCCCAATCTGAAGCATATCGATCCCGATCTGCTCGATAAATACTTCGATCCGGGGAATGTCTACTCCGTACCATACATGTACGGCATTACCGGAATCGCTTACAATCGATCCTTCTTCCCGAACGGCGTCGATAGTTGGGCGGCACTATTCGACACAGCCCAGATCGAGAAGTATCGCGGGCAATTCAGCATGCTCGACGATGAGCGCGAAACCCCTGGCGCTGCGCTGAGATTCCTCGGCTACTCACTGAACGAAACCTCGCCAGAGGCGCTGAAGAAAGCGCAGGACCTGCTGATTGCGCAGAAGCCGTACCTGGCAGGGTACAACAGCAGCGACGTGAACCGGAAACTGGCGAGCGGCGAGTATGTCATCGCGCATGCGTGGAGCGGCTCGGCGTTACAGGCGCGCAATGGGCTTGGAGACGAGTTCTCCGGCAACCCGGATATTGCCTTCGTCATCCCGAAGGAAGGCGGGATGATCTGGATGGATAACATGGTTATTCTGGCAGACTCACCCAACGCCTACACTGCGCATGTGTTTATGAATTTTCTGATGCGCCCCGACATCGCTGCACGCAACGCTGAATACATCGGCTATCTCTCGCCGAACGTCGAAGGGATCAAACTGTTGCCGCAGGAGATCATCGACCTGTACAACGAAGGGTTCGCACCGAACGACGAAGTGATGAAACGCCTGGAATGGGCGATACGCAACGAGCAGACAGCGGCGTTCACCGATCTGTGGACGGCGGTCAAGGGGGAGTAGGCGCCGCCGACGGCGGATTTATTTCTATTTCGGTCGCCGTGCGGGGCGCGCCATTCCCAGGAGTGTTCAACCCTGTCCATGCATTGTGCGCCTGGCGTACCGGCAGCAGCGATCAGATCGCGTAACTTTCATAAAAAAAGACTGACCATCACAGGTCAGTCGTTCGCTGGCTGGGGGACAGGGACTCGAACCCCAACTACCTGATCCAGAGTCAGGCGTTCTACCGTTAAACTATCCCCCATCGTGGGAACAGGGGCGAGATTCTCGCCCCTGCTGCTGGTGCCGAAGGGGAGATTTGAACTCCCACGAGGTCACCCTCACTACGCCCTGAACGTAGCGCGTCTGCCAGTTCCGCCACTTCGGCTTACGGGAGCCGACATCATTGCCAGCGCACAATATGATACATCAGACGCAACAATTTGTCAAACGCCAACCTTGACAATGCCATGCTCAAGTTCATATAATAATGGGGCGCAATCGCATAGTCTGGAGAGCAGGTCAATGGCGTTCAAGGACTACTACGAAATATTGGGCGTCGACCGCAACGCAACGGACGCGGAGATCAAGAAGGCATATCGCAAACTTGCGCGTCAATACCATCCCGACATTAATCCCGGCAACAAGGCTGCCGAAGCGCGCTTCAAGGAGATCAACGAAGCGTATGAGGTGCTGTCGGACAAAGAGAAGCGCGCCAAGTATGATCGGTTCGGGCGCGACTGGCAGCGCTACCAGGATGTCACCGATTTTGGCGGGTTTGGCGCGGGTGATTTTGCCGATATTTTCGAGACGCTGTTCGGCGGCGGGCGTGGTGTGCGCAGCAGTGTGACTTACCGTACACGGGGGCAGGATATCGAGCAGGCAGTTGATATTACCCTCGAAGAAGCCTTCAGTGGCACGCAGCGCACCCTGCAACTGCAATCGCCGAACGGTCAGATACGCTCACTGACGGTCAGAATCCCGCCGGGGGTCGATACCGGATCGCGGGTGCGGATCGCTGGCGAAGGCGCTCCCGGCATGGGTGGCGGTCCGCGGGGCGATCTCTACCTGGTGATCAATGTGGCGCCGCATCCGCGCTTCGAGCGACGCGGCGATGATCTCTACGTCCGCGCGCCGGTTGATCTGTTCACGATGCTGCTTGGCGGTGAGGTGAAGGTGCCAGCGATGGGCGGCAGGACGGTTACGCTCAAGGTGCCTGCCGGGACGCAGAATGGGAAGGTGATGCGTATCAGCGGGCAGGGTATGCCACGTTTGCGCGAATCGCAGTCGCGTGGCGATATGTATGTGACGCTCGAGGTCGCGTTGCCGACCCATCTTTCGCCGCAGGAGCGCGCGCTGTTCGAGCAATTGCGCGCGATGGCGACGGCGCGATAATCAGGCAGGGTGTTCTGGCGATGAAGCAGCGCTACTACACGATCAAAGCAGCGGCGGCGCTGTGCGGAATGCACGAGCAGAGTTTACGCCTGTACGAGCGGCGCGGTCTTATTCGACCCCAGCGCACCCCCGGCAATATCCGGCGCTACAGTGAGAGCGATATTGAGCAGATCCGGTTCATCAAGCGCCTGATCGACGACCTTGGCGTGAACCTTGCCGGTGTCGAAGTGATCCTGCACCTGCGGCAGCAACTGATCGAGGTGCAGCGCGAACTGGAGGAATTGCGCAGTCGCATGCCGGTCGACGCCTCGTAGCCAGCGTCGCCGGGTGTTGCATGCCGTGCCGCATGTCGGATTCGTCCATTGCTGGACTGTGTTCATAGAGGAGTGTATGCTACGCTACAAGTTGATCCATCCCCAGATCCTCGCTGCTCTGGGGGGCGCCGGTCACGGGTCGCAGGTGCTGATCGCCGATGGGAATTATCCCTTTGCTACCGGCGCGCCAGCCAGCGCGCAACGGGTGTATCTCAATCTTGCGCCGGGATTGTTGACAGTCACCGATGTGCTTGCCGCGCTGGTCGATGCCATTCCTGTCGAAGCTGCGCACGTTATGGTTCCCGATGCCGGTCCTGAGCCTTCGATCTTCACGGAGTTCCGCGCCCTTCTACCGTATCTTTCGCTGCAACCGCTGGGTCGCTTCGCCTTCTACGACGCGGCGCGCTCGCCGGATACGACGCTGGTCATCGCCACCGGTGAACGTCGGGTGTATGCCAATATCCTGCTGACGATCGGGGTCGTGCCGCCGGAATAAGTGCGCCTCCGATCAGAAGGACGGAGCACACGCCGGACGTGTCTGCAACCATGGTTGAAAGGCGATGTTCGGTCCTGCCGCTTCACCGCGCCCCTCTGGATTCAACGCTGGCTCGTAGGGACCATTGGCGACTTCCCACCAGTTGTTGGTCATCGTGAGCGGCAGGTCGCTGGTAGCCCCCTTGCCGATGTTGAACTGGCGATAGAACGGGTTGTTGGGCGGCTCGTGGGCTTCGATGGCATTGTCGCGGATGTTGAGCATCGGGCTGAGGTTGGGCGGGGCGTCGCTGCGCAGACTCAGCCCGTTAGCGCCGCCGATCAGCGTATTGCAGCGAATATTCCCCATAAGCTGGGCATTGGTGAACAGTGCCAGATTGGGTCCCGCAGCGCCAACCAGCAGGTTCTGCTCGATTTCGATCCGCGCCGGACGCTCGAAACTCAGGTTCGTGACGCGCAGCGGCGCGGTTCCTGCCACCAGCGCGTTGTTCAGGATGCGATTGTTGATAATCACGACATCGCTGCCGGGACTACCGCCGCCGCCACGCGTCAGCGTAATGTCGATTGCCGAGCCGTAAGGCATCCGGTTGCCGGATATTTCGCTGTCGCGGATGATGACGAAACTGTCCTCAACGCGAATGTGCCCGCCATTATTGACGATCCGCGCGCTCTGGAGCGACAGACGCCCCGACTGCATGGCCAGCACCGTACCGCCCCCGCCTCCGCCGGTGATGAGAACATTGCGCAGATCGATGACGCTGCCCGCCCGACCGATAATACTTTCCCAGCGCAACCGCGGATCATCGCCGCCGCCAATCTGCGTAAAGCGCACCGGTCGATCTGGCGTTGCCAGCGCCACGATCGATCCATCAATGACCAGCGATGCCCCTTTCCCGATCTGCACCTCGACGCCCGGCTCAATAATGAGGGATGCGCCGCTGCTCACCAGCAGATCGTTCTGGATGATGACCGGGCTGTTGGCGGTTAACCAGCGCACATTGCCCCGAAGGGCATGCACAGGCGGGCGCGTGGTTGGAGCGGGGCGGGATGCACCTCCGCCGCCTGAGTCGGCGGGTCGCGCGGCTGGCGGCGGTTGCGCCGCTGCCTGAACCGGTGCGGCTGGCGGTTGCACTGCTGCCGGTTGGGGTTCAATGCGAAAATCGACCGCCGCTGGAGGATCGGCGTCTACCCCGGTTGGCGCGGGTATCACCGGCGCTGCATCGGTTGGCGCAGGGATCGCAGGCGCTTCGGTTGGGCGGATGAGTTCGAGCGTTGGTTGAACGGCAGGTTCACTCGTTGGCGCACTGGTTGGGGGCGCAGGGGTGACAGGGAGCGGCAAAGGTGATGCACTCAGTGTCACAATCGATGGCGCAACCGGCGCAGGATCGACAATGACGGGCACCTGAACCGGCGCGGCGGCTGGCAGAGCCGGACGAAGCGCCAGTCCCGCTATGAAAGCCAGCGCGACCAGCAACAGCGCGATCAGTGAACCCAGCGTCCAGAGCGCGGTCAGTGCGCCACGCGGAACCCGCAGGGTGATCATGTCATCACGTTGACGGTCGGAATGGTCGTTGGACGTACTCATCGAGTGACCTCCCTGCGCCGGGTTCATGCGCACCATGCGGTGTGTCGCCGGAGAAACGGGGCGATTGCGATCCTATCACAGAAGCGCCTGGATCGCAATCGCCATCATCCGTTCCGTTCAACAAGATCAGGTTGCCAGGAAGACGGCGCGTAGTACGCCGATCTTTTTACCTGTTTTAGGGATTGACTCTGTGAAAAGCCGGACTATAATAGGAGTCGCTTCCTTCCCCACGCTGCGAAGAAGCCTGTTCTCCGCTTGCATCCGTTCTCAGGGATCGTATCGTTATGAGCAGCGCGCTTGCCATCGCTTCGGTCACCGCTTTTCTCAAAAATCTGCTCGAGAACGGGTTGGTGGACGAAGGAATAAATGCCAGTATCGGCGGTGATGCGGTGGTCTCCGCACTACCGCCCGACCGCATCACCACCGGAACAGATGAGCGTCCGCAACTCAACCTGTTCCTGCACCAGGTGACGCCGCATACCGGTTTGCGGCCGCGTGAGCGCAGTGACCGGCGCGCGTTGCTGGGGCTTGATCTGCACTATCTCCTTACCGCATACGGCGCACAGGATTTTCAAATCGAAATCCTGCTTGGGTACGCGGCACAGGTGATGAACCGAACCCCCATTGTTCGCCGCGATGTTCTTCGCAGCACGCTTTCCACACTGGCATCATCCGACAATGGCGGTATTCCGACGCCGACGCTTCAGGCGCTGACCAGTTGTGATCTCGATACACAGGTCGATCAGATCGAGGTTCGTCCACAGTACCTCAACGGCGAGGAGTTGTCGAGGATCTGGTCGGCGTTGCAGGCGCGCTATCGTCCATCTCTGGCGTACAAAGTCTCGATGGTGTTGATCGGGTGATCGACAAAAGATAGAGAGCGAAATGGCGGCGATTTCTGCCGAAACCTGGGAGCAGATCAATCATCGTGCTCTGGGAGTGGCGCTTGCACGGGTGCGCACTGCGCTCGAACGCTATGTGCGGGGCGAACGTCCGGTTTCTGAACAGCCTGCGGCGCCAGAGGCGGACGATGGCGGCAACCGTTCGGCGCTTGCAACCCTCTGCGCCGCCTTTCGGTTGTCGCCGTTCGAGCGTGATCTGCTGGTTCTCTGCGCTGGCGTCGAACTCGACGCCAGTTTTGCTGCGCTCTGCGCTGAAGCGCAGGGCGATCCGCAACGAGTTCTGCCGACCTTCAGCCTGGCGCTGGCTGCGCTGCCAGGGGCGCACTGGAGTGCGTTGACGCCCGACGCGCCGTTGCGCTACTGGCGCCTGATCGAACCTGCACCCGGAGGGTTGCTGACGCGGGCGCCGCTACGGATCGATGAACGGGTGTTGCACTATCTGACCGGTATTGCGTGCCTGGATGAACGTTTGCGCGGGTTGGTAGCGCCGGTGCGCGCGTTCGATGCGTTGCTACCATCACACCAGGCGCTGGCGCAGCGTATCGCGGGCGCCTGGCGCCGCACCCGTGGTCGATCACTGCCGCTCATCCAGGTCTGCGGCGATGAACGTGTGACCCGTCAGGCGATCGCGGCGGCAGCGTGCGCATCGGTCGGGCTGGAACTGTATGTGCTGCACGCAGCGTTGCTGTCGCCAGTGCTTGCCGATGTCGAGACATTGATCCGCCTGTGGGAGCGGGAAGCGGCGCTCAGCGCCGGCGCATTGCTGGTTGAGTGTGACGACGTTGATCCCGCAGAAACGACGCGCGCCAGTATGCTGACCTGGTTGCTCGAACGGACCGGCGGCGCGCTGATCGTCTCGGCGCGCGACCGCTGGCGCCCGACGCAACGGGTGACTGTCACTGTCGATGTGCAGCGCACGGGGAGCGATGAGCAGCGTGATGCCTGGCGCACGGCGCTCGGCGCTGCTGCCGGGAATCTTGACGGTCAGATGGATGTGCTGGTGTCGCAGTTCAATCTCAGCGCCCACGCCATTCGCGCTGCCAGCGCCGATGCGCTCGGTCGGCTGGACGGCGATGCCGGTCACGATATTGCGCAGGCGGTGTGGGATGCCAGCCGGGTGCAGGCGCGACCGCGCCTGGACGATCTGGCGCAACGGATCGAGTCGTCGGTGACGTGGGACGACCTGGTGCTGCCAGCGCCGCAACGCCAGGTATTGCGCGATATTGCCGCGCATGTGCGACAACGGGCGCGCGTCTATGAAACCTGGGGGTTTGCTGCGCGCAGTTCGCGCGGTCTGGGGATCAGCGCATTGTTTGCGGGCGCCAGCGGTACCGGCAAAACGATGGCGGCAGAGGTGCTGGCAAACGAATTGCACCTCGATCTGTATCGCATCGATCTCTCGTCGGTCGTCAGTAAATACATCGGCGAGACGGAGAAGAACCTGCGACGCATCTTCGACGCCGCCGAGTCGGGTGGCGCGATCCTGTTGTTCGACGAAGCCGATGCGTTGTTCGGCAAGCGAAGCGAGGTTAAGGACAGCCATGATCGCTATGCGAATATCGAGGTCAGTTACCTGCTCCAGCGGATGGAGGCGTATCGCGGCCTGGCGATTCTGACGACCAACCTGAAGAGCGCGCTGGATACGGCATTTCTGCGGCGCATTCGCTTTGTGGTGCAATTCCCGTTTCCCGATGCGGCGCAGCGCGCCGAAATCTGGCGCCGGTCCTTCCCGCTGGGCGCGCCAGTCGAAAACCTCGATTTTGACAAACTGGCGCGCCTGAATGTCGCCGGCGGGAATATTCGCAATATCGCCCTGAACGCCGCCTTTCTCGCCGCCGATGCCGGTGAGCCGATCCGTATGATGCACCTGCTGCGCGCTGCGCGTACCGAGTATGCCAAACTCGAAAAACAACTGACCGAATCCGAGATTGCGGGGTGGGTGTGAGGAGGGCGAGGGGTGAGAGGCGAGAGGCGAGCGGGGATTAGGCGAGAGGTGAGGGGCGCGAGGCAAGGGGCAACGTAGGGACGCAGCGGCGCTGCGTCCGTACTGGTAGTGGTAGCGGGGGGACGTAGGGGCGCTGTAGGGGCGCCGCGCAGTTACGCCCGGACCGGCAGCGGGGGTCAATGGTGCTCACAGGGGTAGATTTTTTGGCAAGCCCCTGCATTCCTTTTCTCATTCTGGGCTTCAGGAAGCCCGGACTCCCCCTTCTCCCCTTGTGGGAGAAGGGGGGCGGGGGGATGAGGGGCAATGGCGGAGCGACGGGGGCGCAGCGCATCTGCAACCATACCGGCAGCAGCGGACAAGGATTAAGAGCATGACTGAACGTCAGCGAATCTTTCTTCAGCGTCGTCGTCCTGTCGAAACAGCAGCGCAGCGTTCGACTGCCCGGGCGGTTGCCGAACAGAGCGCGCCGGTGAGCACCGGGCATCTGTTCAACCAGATGCGTTTGGGCGCGCTGTTTCCTGCCACGTTGCCGCATGTCCAGCGCAAAGAGCCGTCGTCCGACGCCACAACCAGCACCGGCGCGCCTGCGAACGGTTTGGTGACCGTCGATGCCGCCATCAACCCGCTCGTCGGTTTGAAACGCGGTGATGGATTGACCTACGGCACATGGGATCTGCGCCCGCGCGTCAAACTTCTGCAACATAAACTGAACGAAAAAACCGGCGCTGGACTCAATGTAGACGGTATGTGGGGTCCAAAGACATCGGCGGCGCTCGAGTCGTTCATGCTCAGTCGAAGTACGGTCCCGGCGGAGATTGTGGATCAGAATACCGCCGATGCGCTTCTCGACCGCAAGAAGGAAACGCCGGGTCCCGGTCCGCAGCCGATCCCGCCCGGTCCGCAACCGGTCGAGTCGACTTACAACCAGACGCTCGAAGATACGCTGGACGCGGTGTGGTTGCAGTATCAGTTGACGTTTGAAGGGCAGCGTGGCGGCTTGCAGAAACTGGAGAAAGACCTGGCGCAGATCGAGAAACCGAAGAATGTGATCGTTGAAGCGCTGAAGGATGCTGGCAAGGCGGCGCTCGATGCGTTGCTCGGATTGGGCGGTGGCGCGCTGCGCGTTCCGATCAAGGCGGCGCTCGCAGGGTTGGGCGAAACGATTGCAAAAGATGGCGTCGATAAGGTCTTTGATAAAGCGCAGGAGGCAGCGAGTACGGAGGTTGGCAAGAAGGTCGATGAACTGGGGAGTGAAGACGGACCAACGCTCGAAACATTCATTGAGGCGCAGCGTGCTGCCCTTGAAGAGGCGTCATCGCAGACCCAGGAAGCCTTTCTGCTCGAAACGCGCGCCAGGTTGCGCCAACCCGCATCTGGCGAGCCGGTCAGCAGCGGTCCTGAGGATCCGCGCGTGCTACGGGCGCGCAGGTTGCTCAACGCGGTGAAACAGGAGCGACCGCAGGCGTTTCAAAAACAGTACGACGAATCGCTGGCGAAATGGGCTATCGCTCAGGCGCAATCGAAACTCGGCACAATGGACAGCCCCAGTCGCTCGGTCGGCGACGAGAAGGTGAAGACCACCGATATGAGTAAGGCGAAACCGGACATGCCCGGCGTGTTGACATTCGAGATCGAAGGGACGAAACCGGACATGCCGGTGAAGATCACCGGCGCGAAAATTGTGGGGTTGAGCGAAAAGACGCGCCAGACGCTGGAACGTCAGCAGCGGAGCATTCTCGATCTCGGGTTGCCGCGCTATGCGTCGGGCAAAGTGGAGATCAACACCGGGTTGGGGTCGATCCTGAACTTCACGAAACCAACCATTCGCATTGCGCAGAACGAAACCAGCGACCTGTTCGAGCGCGAGAGTACGGAGGGCGGCAAGGAATGGCTGAAGAAGAAAGCCAGACCGTTCGAAGAAGTGCTCACCGAAGACCTGGTGAAGGAAGGCATGCGCATGGTGTGGGAGGAGATCGACCGGAAACGTCTCAGCGAGGTTCCGGGCGGCTTGAAAGGTCCCTGATGCGCTGCGCTGTTGTGCAAGAAACGAGGTGAACCTGTGAACGATCGCATAGTGCTGCGTCGTCAGCGTCAATCGATCCATCATCGCTCCATGCGTTCCGACCTTTCGCCGGACAGTTCCCTGCTCTTCGCATCAGGGAACGCGCTGCGCGGTCATACCTTCAACGCGATCGCCATCCACCATCACGCGCCGTTGGGTGCGCCTCAAACCAGGCTGACTGTCAACACGCCAGGCGATGCGTACGAGCAGGAGGCTGATCGTGTCGCAACGCAGGTGCTGCGGATGAGCGACGAGGAGGTGCTGACGGCGCGCGCCGGTGAGGGCATTCAGCGCCTGACGTCGGAGGAAGAGGAAGAGGAGTTGCTCCAGGCGAAGGAAGAGTCGGGCGCCACGCCGCAGGTGCTGGCGGCGCGCGCCGGTGAGGGCATTCAGCGCCTGACGTCGGAGGAAGAGGAAGAGGAGTTGCTCCAGGCGAAGGAAGAGTCGGGCGCCACGCCGCAGGTGACTCCCGAAACCCAGGCAGCGATTGACGCCATGCGCGGTGGCGGCGCTCCGCTCGATCCGACGACGCGCACGTTTATGGAACCACGCTTCGGGCACGATTTCAGCCAGGTGCGGGTGCATACCGATGCGCGCGCCGCAACCGTCGCGCGGTCGCTCGACGCACTGGCGTTCACCGTCGGCAACGATATCGCCTTTGCGCCAGGGCAGTACCGACCGGGCAGCGACGAAGGGCGGGCGCTGCTGGCGCACGAGTTGACCCATACCCTTCAGCAGACCGGCGGCGCGGCACGGGTGCAGCGGCAGGAAGCGGGAGCGGAACGTGCGGCATCGTCCGACAATGCGACATTGAAGCGCTGACCGATGGGGCGATCAGTGTTGCCGGCGGAGGTGCGGTAGTGCGTATCAGTGCGGGTATGCTGACTGTCGATAGCGGCTTGATGCGAACGAGTGGCGTGACACAGACCGACACGCTGATCGCCAACAGTGTGGTGGCTTCATCGTACACGCCGGGCGCTGGCAATCTGATGTGAGTGTGGCAACCAATGACTGTTCGACGTGCTTCCCCGATCAGGCGCCTTGAGAAAACCGGTCATCACGAGATTGTGCGGCGGACGTCGCCAACCGATGATGCTCCGACCGGTCATCGGTTCAGCCATGATTTTCGTCAGGTGCGTCTCAGCAGCGCAGAACCGCCTGTGACGTTCGAAGCGGAGACGGAGGAAGCGCAGCAAGGGGAATCGTTGCAGTCGGAAGAGGTTGAAGCGACCCGAACTCATCCGACGCAAAGAGTGTTGTCGGGTTCCTGGTTGGTGCAACGTCAGGAGGGTGCGTCAGGTTCGGCTTCGATATTCGATGAGATTACCGCTGAAGCAGCAGCGTTGCGACCAGGATTGCCCACTACGTTTGCAGACTATCGTCAACGCATTCAGAGCGCAACATTTCTAGGTGTGAGCATCTCTGGCGGCGTTGATCAGGAAATGGCGGGTGTGTTACAGCGTGCTGAGCGGGAACTGAACTTTACACCGGGTTCGCGCAATCAGCACGGGGTCTATCAGATTGGCGGGATGGATGCCAGTCGGCTCCACGGTTTGCATTCATGGGGACTGGCAATCGATATCAATACACCAACCAACCCCTACATTATGCACGAAGCCGGTGAGGCGCAACTCGATCAACAGCTGGCGCCGGTTTATGATCGCATTGCCTGGTTTATTCTGGGGAGAAGCTCGGTTATTCCCCGGCAGATCCAGCAGTCATCCGGTGGTTCACGCGAACAACGGATTGGCGACATGTATGATCGTCTGGCAGAAGAAAGTCAGGCGATGCAAACCTATTTCCGCTATATGCAGAATGTCGCGGAACTGGAACAGTATCTGAGCACCCCTGAGGGATACGAACGCTATCTGCTGATCACGCACACAACCGAGCCGGACCGCTCGATGCCGCCTGATATTGAGGCATTGCGCCGACAGATGATGGCAGATTTTGCAGTGTTGACATCGCGTCCTGGACCGGTCATTCAACCCATTGAGAATGAGCAGGCTGGCGCATCGGTTGCTCCACCGCTCACATATCCACATCCTGAACGCCTGGAGGGACGACAGGATCGCCCATTTGATCGTGGCGGATCGAGGCGCACACCGCTGCGAGGGTTTCTTGACCTGGAACGTGAGGTGGTGATGGCGCTGACGCGCGCCGGATTGCGCTGGGGCGCCTGTGAGTTGGGTGCAGAGAGTGGCGACATCATGCACTTTGATATGGCGCTCCAACCGCTCGGTCAGGCGGTTTTTCAGGCAATCCGCACTGTCAAAGCGCGTCATCGCTCTTCGGCTCGTCCTGCGCAACGTATGACTGCATCGAGTGGCGATGCCGTTCCTGATGTTTCACCCGCTATCGAGTCGGACATTGACGCCATGCGTGGCGGCGGCGCTCCGCTCGATCCGACGACGCGCGCCTTCATGGAGCCGCGCTTCGGGCACGATTTCAGCCGGGTGCGGGTGCATACCGATGCGCGCGCCGCAACCGTCGCGCGGTCGCTCGACGCGCTGGCGTTCACCGTCGGCGACGACATCGCCGTTGCGCCGGGGCAGTACCGACCGGGAAGCGACGAAGGGCGGGCGTTGCTGGCGCACGAGTTGACCCACACCATCCAGCAGACCGGCGGCGCGACGCGGGTGCAGCGGCAGGAGAACGTGAACACCGGCAGCCCATCGACAGGCAACGGTTCGTCACCGGGTAGCGGGCGACGCATGATCAGTTATGGCAGCCAGGGGCAGGATGTCGCCGATGCACAGCAGTTGCTCAACCAGCATGGCGCTGCGCCGCCGCTTGTGGTAGACGGCATCTTCGGACCGAAAACACGCCAGGCGACGATTGAGTTCCAGAAGTCGCGCGGTCTCGCGCCCGACGGCATTATCGGACCATTGACATGGGGGGCGCTGGAATCGGGAGCGCCGCAACCGCAACCGCCAGGACCGCAACCGCAACCGCCGGGACCGCAACCGCAACCGCCGGGACCGCAACCGCAGCCGGTCGAACGCTGGACGAACGAAGACCGGACGATGATCGCCGCGCATATCCAGCCTGGTGTGTTGACGGCATACCAGGCGTCGCGGATCGAACCGGCGGTGATGGCGCTCGCTGATGCGGAATATACCAGTTTTCGCGCCCTGCTCCAGAATGCCGGTTCCGCTATGGAACGCGCCTTTCTGTGCAAGGCGCTGGCGGCAGGGCGTTCACTGAGTGATATAACCGATTTCGCCGCCACAATCCACGGCATGAGCGACAACTGGTTGCTGCGCAATCTGAATGTCGTAGACCTGAACGAAGCGGATGGCGTCGAGCGCGGCATTATTCAGCAGTACGGCAACAGTTGCGGTCCCACGTCGGTGCAGGTCATCCGCGCTTCCGCCGACCCGATCTATGCGCTGGCGCTGCGTTCCGCCGGTCCGATCGAGCAGGCTTCGGAACATGCGGTCAGTGCGCCCGACACCATTCCAAACCAGATGCTCGCCGGCGAACAGAAAGCCATTCTCGACACCCATGCTGCGACAGGAACCGGCAATCCGGCGACCGACCGCACCCAACCCACCGGCGGCGCCTGGGTGGAAGGGGAAATGAATGCGCTTGCCAGCGCCACCGGGGTTACATACCAGACACGGATCGTCGGAACGCAGATCACGCTCGATGCGGCACTCGATGTGCTGCGGACCAATCTGACCGCCGGCATTTTCGTGCCGATTGTCGTTGGCGGCAGTGTTGGCGACACGGCGCACTATGTGATGGCGATGGCAATCAGCGGCAACCGTATCCAGATCCACGATGTCGCCACCGGCGACACCATCTGGCGCACTGAACAGGAGTTCAAGGACAGCGCGCTCAATCTGCCGAGTGGACACAAGATGCTGACTGCCATCGACGTGCCGACCGCTGTGCCGACGACGCAACCGCAACCTGCAACGCCGTGACTGCGCCTGTAGAAGGGGAAAAGCGATGCCAATCGATCCGCACCGTGACTACACGCGCCAGGATCAACTCGCTCTCGACCTGACCGAACTGTTTGCCGGAGGGTTACGCGATGAGCATGGACAATTGCCGCTGACGCTTCAGGGGATCGGCAGCGCGGCGATGGCGTTGCAAACCGAACAGGCAGGCGTTCCGCTGCCCATGTTCAATCGCATGCTGACGACTGCGAATGAGATCAGCCTGCAACGCGCCAGGGCGATGCCGGAAGAGCTGGTCGAGGAGTTGGAGAAGCGCGGTTTCCCGCAGATCGCGCGGATCATTCGTGCCGGTATCGACGCATGCCGTGACGACGCCGATTACCGGAATTTCGTGCGCTGGTTGATCCAGGTGCGCAACCTGATTGTGTTTCGCGCGCAGACCGGCGGCGCTGCATCCCGGAAGTGACATGCCATGATTGCCGATCTCCATCCTGCCATTCGCCACCTCCTCTTCAGTCGCGGACTGATTCCGTCTGATGAAGTGGATGTGCGCTTCGAGCGCCCGACGAAGGAGTGGCTCGATTCGCTGGTGCGCCCGACAATCAATCTGTATCTGTTCGATATCGAAGAGAACACCGACCTGCGTCAGACAAACATGCCGGTGATGCGCGGCAGCGGCGGCGCGACCTACCGCATGCCGCCGCGCCGGTTCGATCTGCGCTACATGGTGACTGCATTCACCACTGTCGCCGATGATGAGTATCTGCTGATCTACCGCGCGCTCGCCACGCTGTTGCGCTACCCGACCCTGCCGCCATCGGCGCTGGCGGCGGCAATGGCGGTCATCGCCGGGCGTGAGGGGAGCGGGGCGGAACAGGCGCGATTTGCGGCGCTTGCCGATGCTGGCGAGCGAACAACATCACGCGACCTGCGCAGCGCCGTGGCGTCGGCGGAACTCGGATCGTCCACGCGCGCGGCAATGCTCGCCCTGCTCGACGATCCGCCCATAACCGCCAGGATTGCAACCGGCGACGAGGGTCCGCGTTTACTCGAGGTATGGAACACCCTCGAACAGGCGCCGCGCCCGTCATTGCTCTACATCATGACGATTCCGGTCGATCTCGACCTGGCAATCGACACGCCGCTGGTGCTCACACGTATGCTGCGCATCCGGCAGCGCACCGAAGCAGGCGGCTCTGCAGAGCATATGCGGATTGGCGGCGTTGTGCGCGATCAGCATGGCACGCCGCTTGAAGGGGTTGTGGTGGGCATCGAAGGAGGTGCAATCGAAACGGTGACGAACAACGAAGGACGATATGCGCTGAGTCATGTTCCTGTCGGGAAGGTGACGCTGCGGGTGACGCGCCCTGATGGGAGCGTTCGCATCATACCGGTCGAAACGCCGTCGGACACATACGACATCTCACTGGATTGAAAGGAGCGGTTCATGCCTGAGTATCTCTCGCCTGGCGTCTACATTGAAGAGGTCAGCAGCGGTCCCCGCCCGATCGAAGGCGTCGGTACGGCAATGGCGGCTTTTGTCGGGTTTGCTGCCGCCGGTCCTGTCAATCAACCGGTGTTAGTCACAAGCTGGACGCAGTATGTTGAGAAGTTCGGTCGGCTTGACGAGAGCGGACGGCGGAATCCGCATATGGATGGCGCCTATCTGTCGCACGCCGTGTACGGCTATTTCCTCAACGGCGGCGGTCGCTGCTACGTGACCCGCATTCCGCAGCAGTCGGACGGCAAAGCGCCGCAGATGCCGCGTCTCGAACTTCCCACACGCGCGTCGAAAGCGTTGACATCGCTGATTGTGACGCCCAAGAGCGAGACCGCCAGCGACATCCAGGTCGAAATCGGTCCGCCGGTTGGCGAAAATCCGCCGCCTGAGGCGTTCACCGTCAAGATCAGCATGGGAGAGATCAAAGAGGTCTACGAGAACGTTTCGTTCAACAAACGACCCAAAGATGGCACGTCCTACGTCGTCGAGAAGATCAACAGTTCCAGCACGCTGGTGCAGGTTGCCGAAGGTCCGGCAACCGGTTCGCTGGCGGATCGCGTGCCGGAGTTTGGCATGTCGGTCATCAAGCCGCCGGCGCCGCTGGCGCCAGCGCGAGTGGATGCCACGTCATTCGTCGGCAGTGCAGCCGAGCGCAGCGGTGTCGAAGGTCTGGAGATCGCCGAGGATGTGACGATGATCTGCGCGCCAGACCTGATGTCCGCTTATCAGTCAGGCGCGATCACGAAGGAAGGGGTCAAAGCGGTTCAACTGGCGATGATTGCCCATGCCGAGCGCATGCAGGATCGCATGGTCATTCTCGATCCACTTCCCGGTCTGACGCCGCAGCAGGTCAAGCAGTGGCGTGAGCGCGACACGAACTATGACTCGAAGTTCGCTGTGCTCTACTACCCGTGGATCAAGATCATGGGACCTGATGGTAAGACCGAGATGGAAATTCCGCCATGCGGTCATATTGCAGGCATCTGGGCGCGCAACGATAATACGCGCGGCGTCCACAAGGCGCCAGCGAACGAAGTGGTGCAGGGTGCGTTGGGTCCGGCAATCGCCATCACCAAGGGTGAGCAGGATGTGCTCAACCCGATCGGCGTCAACTGCATCCGCTCATTCACCGGCATGGGGTTGCGGGTCTGGGGTGCGCGCACCCTTTCGAGCGACGCCGCCTGGCGCTATGTCAATGTGCGTCGCCTGTTCAACTACGTCGAGAAGTCAATCGAACGCGGCACACAGTGGGTGGTCTTCGAGCCGAACGATCCGAACCTGTGGGCGCGGGTCAAGCGGGATGTCGAAGCGTTCCTGACCGTCTGCTGGCGTGATGGCATGCTGTTCGGTCTGACGCCGCGCGAAGCGTTCTACGTCAAGTGCGACGAAGAACTGAACCCGCCCGAAGTGCGCGATCAGGGCAAACTGATCATCGAAGTCGGGCTGGCGCCGGTCAAGCCCGCCGAGTTCGTGATCTTCCGCTTCAGCCAGTTCGCTGGCGGCGGAGCATAAGGTGCAGCATATCCTCTGCCATGCGCAGGGGACGATCATCCACATAAGTTTCAATGGAGGACACGATGACCGACAAAGACCCTCTGATTTCAGCATGGTTCGGCGTTGATTTCGGTGATGGCGTCGTCGGCGCCTTCCGCGAATGCACGGGCCTCGGCAGCGAGAACGAAGTCGTCGAGAGCAAAGCCAGCGGACCGGACGGGAAATACATCATCAAGAAAATCCCCGGTCGCATGAAGTGGAACAATATCACACTCAAGCGCGGCATTACCGATGCCATGGATATGTGGAAGTGGCGCAAGATGGTCGAGGAGGGTGATATTCAGGGCGCGCGTCGCAATGGCACGATCACCATGTTCAACACCAGAGGAGAACCGGTCGCGCGCTGGAAGTTCGTCAACGCCTGGCCCAGCAAACTGACCGGTCCCGACGCGAATGCGACGAACAACGAGGTGGCGATCGAGACCCTTGAAATTGTCCACGAGGGGTACGAGCGCGTTCAGTAAGGATCGGCGCAAACGTCATTAAGGTAGCAGGGGCGCGGCATGATGGTCTTTGAATAAATCATCCAATATAGCCCGCGCAGGCGGGCTTCGCCCTGGCTAGCCGAGGGCGAAGCCCCACGGCTAGTTTGGTATAGCGGATTTAATTCTCAATCTCCATCACGCCGCGCCCCGCCGGAATGAACCATGCTCCAGACTGAATTTCCATTCGTGCTGCCCTGCGGCTATGTCGATGATCAGGGAAACCTGCATCGCGAGGGTTCGATGCGGCGCGCGACGGCAATCGATGAAATCGAGCCGCTCGAAGATCCGCGGGTGCAGCGCAACGAGGCGTATCTCAGCATTCTGCTGTTGAGCCGGGTGGTGACGCGCCTGGGAACCGTCGGCGTCATTACGCCGGCAATCGTCGAGCGATTGTTTGCAACCGATTTTCTCTATCTGCAGGACCTCTACATCCAGATCAATGCCGCCGCCCCGCACGTGGTCGAAACCCAGTGCCCGACGTGCGGGGCGCGTTTCGCGATCGATGTGGGGGTCGGTGACATGACAGGATAACGGGATGAGTGAACCAGTACCGCCACGCAGGTCTGCTCCCGCAGCGCCTGATGCGTCGTCTGCGGATCAGCGCGAACAATCGGAGCGCACCATCGATATCGAGGCGCTGGCGGAGCGCGTGTATCGGTTGATGCGCGAAGAAGCGCGCCTGGAGCGCGCCCGTGGCGTGACGGTCGGCAAACAACGACGGAAGAGGTGACACCGTGCCGACGACAGAAGAAGCCTATCCATCCTATCGTTTCTATGTCGAGATCGCCGGCGTGCCGCAGGCGGTGTTTACCGAAGTCAGCGGGTTGCAGATCGAAACCGAGATCACGGAGTACGAGGAGGGTGGCAACAACGACTTCGTTCACCGCCTGCCGGGGCGCACGAAGATTGGCAACATCACCCTCAAGCGCGGGATGACCAGTTCGAACGAACTGTTGCAGTGGTTTCTCAAGATTGCTCGCGGTTCGATCGACCGCCGGAATGTGACGGTCATTATGTACGACTCGGCGGGTAAGGAACTGTTTCGCTGGAATTTCATCGAGGCATACCCTGTCAAATGGACGGGTCCGCAGTTCACTGCCGCATCGACGGAAGCGGCGGTGGAAACGCTCGAATTGACGCACAACGGGATGACGATCGGGTGATGTGATGATCCGTCGGACATTGATTACACGATTGCGCCGCCACATGCGCCTCGCGCGCGCGCTCGCCGGGCGCTCGCCGCTTGCGGTGCGCCAGGCTGTGGGTCAACCGCTTCTGTGGGCGGTTGGGCGCGCCGATACGCCTCCCCGGCGAGCGCGCGCGCCGGGTTTGATCCGGCTTGCGCCGGATTCTCGTGCGTTTACCGACGCATATGCTGTGCTGCCGCCAGTTGCGCCGGAAACGCCGCCGGTTGCCGATCCGCCACGCTTCGATGAGCAGGAATTGCGGGAGGTTGCCAGCGAAGCGCAGGCGGTGCCGGTCGAAACTGCGTCCCCTGCGCCTGGTGCGCCTGCGGTGGAGACCGGTGCATCCCCGGCGACGATCATCGATGCAGCGCGCGCCTGGGTTGCACAACAGTTGCGTGATCGAACAGCGGTTCAATCCGTGGACCGATCCGTTGCGCAACCTGAACCGGCGCCGGACAGTCGTCCGACGGCAGCGCCATCGCCGCCCGCTGAGGTGCGCGTCGCCCGTCCACCGCGCTTCCTCGAGCGCACACCTCCCCGCCGTGAAACATCGCCGCCATCGCAACCTGCAGCACCGCCGGACGGCAGTGCTGCACCATCATTCGACCGCTCGCCGGCTGCGTGGATGGAGCGCCTGCGCGCCGATGCCCGCCGTCGGTCGGAGGCGGCGACGCAGGCGTCGTCCGCGGTGCCGGAGGAAGGAACGCCGCCGGAAATTGTTGCGTCGCCGCTTCAGGGACAGGCAGAACAGGCACGCGATGACGGGGATTATCATACCGGGATGCCAGATTCCATTCTTGCCCCTGATGCCGCTCCTGCTCAGCGTGACGCCGGGCAGGATGTTCCGGCGCAGCAATCGCCCCTCCCGCCTGCCGACATGTCCGCCCGTGCACCTGCGGCGGTTCCGACGACAGAACCGACTGCACCTGCGGATGATACCGCATCAGCATTCGCCCCGCCGCCCGCTGTCGCGCCAGCATCGCCGGGCATGTTGGAGCCGGAAGCGCCTTCACTGCCAGAAGGTGGCGCTACGCCAGCATTCGCTCCCCTGCCCACACCTGCGCCAGCATCGCCGGGCACGCCGGAGCCGGAAGCGCCTTCACCGCCAGAAGGTGGCGCTATGCCAGCATTCGCTCCTCCGCCTGAGGTTGCGCCAGAATTGTCAGACACGCCGGAGACGGGTGCGCCTTTGCTGCCGGAAAGCAGTGCTGCGTCAGCATCGCCGGACATGTCGGAGACGGGTGCGCCTTTGCTGCCGGAAAGCAGTGCTGCGTCAGCATCGCCGGACATGTCGGAGACGGGTGCGCCTTCGCTGTCGGAAAGCAGCGCTGCGCCAGCAGTCGCCCACCCGTCTGCAGCCATCCAGGGATCGCCGCGCGCGCCGGAGGAAAGCGAATCTTCGCCAGCAGGACTGATCGCATCGCCGGAACGTGGCAGCGCTCCCGTGTTCGACCGCTCACCGGCTGCGTGGATGGAGCGCCTGCGCGCCGATGCCCGCCGTCGGTCGGAGGCGGCGTCACAGTCGGCACCGCAGGCATCGGGGGAGGGTGCGACGCCTTTGACGCCGGAATCTGCGGCGCAGCCGGTTCAGCGCCGGATCGAACGTCGGGGTGGCGCCGATCACGAGCGTGTCGCCGCCGTACAGGGTGATGCCGGGCAGGATGTTCCGGTGCGACAATCAACCCATCTCGACATGCCCGCGCGCGCTCCAGAACCGGTTGCGGCGCCGGTGGACGACGATGCGCCGGAGTTCGACCGCTCAGTGGAAGCCTGGATGGAACGTCTGCGCGCCGATGAGCGCCGCCGCCAGAAAGAAGCTGCACAGTCGCCGGATCGTTCTTCTGTGGAAGCGTCTCAACCGCTGCCCGACGCGCCTCCGGTGGCGCAACCGGCGGGAGCGCCTCAGTCGGGTGGTGCGCTGTGGGTCGAGTCGGGCAGGGGACAGCAACGCTCCGGGGCGCAACCAACCGGCGCGTCTCAGCCGGGTATCGCCGCATCTCCAGCGCGCGCAACGCGCTTTGCGCCGCCGGTGGGCGCCGCCGTTCGATCCACAACGCCCGGCGGGGCGCGGCTTCCCGCCCGTCCTGCACCATCAGCGCCGCTGCTGTCTGAGTCGAATCGGCGTTTCCTGCGCGCCGCGGTCGGCGTCGATCCGGCGACGGTACGCCTGTCGCGCGGACAGGATGCCGGTCGCCTGACGTCGGCATACCGCGCCGATGCCGTCACATTTGGCGACGATGTGGCGCTGGCGCCCGGCAGGGGCGATGAAACCGCCGAAGGTCTCGGTCTGCTGGCGCACGAACTGACCCACGTGGCGCGTCGGCGCGATCCAACGGCCATTCCGCCCATCGCCCGACCTGCCGAACGGCGTCCCGGATTCCGTCCAGCGTCTCCGGGACCTGCGACGGATGAGGAGGCGCTGGCGCGCATCGTCGAAGCGCAGACCGTTCAAGCTGCGCGGATGCGCTTTGCACCGCCGGTCTTCCCCGCCAGAGCGGAGGCGCCGGTAGCGCAACCGTTCGATAAACAGGAGAGCGCACGCACTGCGCCGCCGGTCGAAGACGCGCCTGCTGCGCCGGATCGCGGGCGATGGGGAAACCTGCCTGCCCCCTGGGAGCCGCTGCCCGACTGGCTTGCGCCTTCGAGATCGGTGGAAGCGCCGCCGTTACCGGTAGTAACCGTCGCGCCTGCACCGCCAGCGTTCACAACACCACCCCAACCGGGCGCGCCCGTCGTGCATGCGGCTGAGACAGCGCGCACCCTGCCCGCGCCTCAGCAACGAGAAACACCAGCGCAGGAGCAGGCGCCAGCCCCTGCGCCCGATATCGACGCCCTTGCGCGTCAGGTCTATGCCGTCCTGAAACGCCGCCTGGCGGCTGAACGCCGCCGCAGCGGATGGGAGTGAGGAGCAGCCCGTATGCCTGACACAAGCCTGGTCAAAGCAAAAATCATCAACCTCGACGATCCCTCGCAGGAGGTCGAGTGTCTGTTCAACCCGAAGGAGTACACCTTCACCAAACAGAACAGTTGGAGTCGCGGCGAAACGCCAAGCACGAATGTGCCGCAACTCGAGTTTAGCGGCGGGCAACCGGCAACCCTGTCGATGCACCTGCTGTTCGACACCTACACCAGCGCGCGACCCGGGTCGAAGCCGAGGGATGTGCGGAAGGTCTATACCGACAAACTCTGGTCGTTCATGATGATCGATCCGAACCTGCAAGACCCCAAAAGCACTCGTGGACGCCCGCCCAAAGTGCGCTTCCAGTGGGGTACGTCCTGGTCGTTCAAAGCGGTCATCACCAACATCACACAGAAATTCACGCTGTTTCTGGTCGATGGAACGCCGGTGCGCGCCGAACTCGACGTAACATTCCAGCAGATCGAGGATACGGCAAACCTGCAACCGCAGAACCCGACGTCGGGCGGTGTCGGCGGTGAGCGGGTCTGGCGGGTGCGCGACGGCGATACACTGGCATGGATTGCGTACAAGTCGTATGGCGATGCGACGCGCTGGCGCCCGATTGCCGAAGCCAACGGTCTCGAACGGGTGCGCGAGTTGACGCCAGGAGCAGTGCTGGTGATCCCTCATGAGTGACAATCGCCATGTTGCCGATCTCTATCTGAAGCTCGACGGCGCTGATGCGCCGCGCGAGTTGGTCGGGGATATGCTGGAAATCACCGTTGAAAACAGTCTGCACCTCCCCGATGTTGCGACCATCGTGCTCAATGATCGGCGGTTGAAATGGGTGGATGATAGCCGCCTGGCGCCGGGCGGCTTGATCGAGGTCAGCGCCAGGCACGGTCGGACGACCGAGTCGATCTTCGACGGCGAGATTGTTGAGATCGAACCGCAGTTCGAGGCGGAGGGTCTCAAGGTGACTGTGCGGGCGTTCGACCGTCTGCACCGTCTGGGGCGCGGCAAACATACGCGCACATTTCTCAATGTGACCGATAGCGATGTGATCACCCAGCTTGCGAACGAAGCCGGTTTGCAGGTGCAGATCGACGCCACGACGCAGGTGCATCCATACCTGGTTCAGTGGAACCAGACGAACCTTGAGTTTCTCCGCGAGCGGGCGGCTGCGCTGGGGTATCTGATGTATGTCCGGCGGAAAACACTGCACTGTACGCGGCTTCCATCTCCCGGCGCGCCGGTTGAACTTAAGTGGGGAACCGATCTGGTCGCCTTTCGTCCGCGCCTGAGCACCATCGATCAGGTGAACGAAGTCACCGTGCGGGGCTGGGATCCGCTCGAAAAAAAGGCGGTCGTCGGCAAGGCGACGTCGGCATCGGTTGCGCCCCGAATAGGTGCGCCTGAAACGGGCGGTAAACTTGCCCAACAAGCGTTTGCCATCAAAGCGGAGGATGCGCTGGAGTCGGCTGCGCGCATCCAGCCGGAAGCCGAGCGGATTGCAAGGGCAATCCTGGCGCACCATGAGAGTCGGGGCGTCGAGGCGGAGGGAACCGCTGCCGGAAATCCAAAAATTGTGGCAGGGGCGGCGGTGAAGATTACGAATGTCGGTACGCGGTTTGGTGGCACGTATGTGGTGACCAGTGCGACGCACCGCTACGATGCCAGCGGGTATGTGACCGACTTCTCAGTTTCCGGGATGAACCCGGCTACCCTGCTCAGCCTGGTGCAACCGGAAACGCCGCGCCTGAATTTCGAGGGACTGGTGATCGGGGTTGTGACCGATACGAACGATCCGGACAAAAGGGGGCGCGTGAAGGTCAAATTCCCGACCCTCGCCGATCAGCAGAGCGACTGGGCGCGTGTAGTCAGCGTCGGTGCAGGCAATAGGCGCGGCATCGAATTCCTGCCGGAAGTGAACGATGAGGTGCTGGTGGGATTCGAGCATGGCGATGTGCGCGCGGCGTATGTCATCGGTGGTCTCTGGAATGGGAAGGATCAACCGCCAAAAGCGCCCGCGGAGATCGTCAAGAACGGGAAAATCGAGCAACGGGTGATCAAATCGCGATCCGGTCATATCATCACGCTGGACGACAGTGATAGCGCGCCATCGATCACCATCGAGGATAAGAGCGGCAATGTCATTAAACTCGACAGCAAAAAGAACGAACTGACGATCAACGTCAAAGGCGACGGCACGATCAGCGCCGATGGCAATTTGACGATCCAGGCGAAGGGGAAGGTGAACATCAAGTCGCAGCAGGCGCTGGCGATTGAGGGTTCGACCGGTCTCGATCTGAAATCGAACGCCAGCGCCTCGCTTCAGGCGAATGCGAATCTTGATCTGAAAGCCAGTGCTGCGGCGACGCTCCAGGCGAACGCGACGCTGGATGTCAAATCATCGGCAATTCTGACCATTCAGGGGACGCTGGTCAAAATCAACTGAAAGGAAGAAGCGCATGCCTCCTGCTGCGCGAGTCGGCGATATGCACACATGTCCGCTGTCCGACGGTCCCAAACCGCACGTTGGCGGTCCGATCATGCCGCCCGGCGTGCCAACAGTGCTGATCGGCGGATTGCCGGCTGCGGTGGTTGGCGGCATGGCGACGTGCGCCGGTCCGCCCGATACGATCATCAAGGGGAGTGCAACGGTGATGATCGGCGGGATGCCGGCCGCACGCATGGGAGATCAGACGGCGCATGGTGGTGTGATTGTGATGGGATTTCCGCAGGTCGATATTGGCGGGTGACAGGCTATGAGCGATTTTCTCGGTGTCGGATGGGCGTTTCCGGTCGGATTGGACGCGCGCGGTCGCGTTGCGCTGGCGCGTCAGGAAGTCGATATCGAGCAGGCGATCATCATGATCCTGCTCACGCCGAAGGGACAACGATTGATGCGACCGACGTTCGGCTGCCAGATTCACGATCTGATCTTTGCGCCGAACGACGCTGCAACAGCGGGGCTTGCCGTCTACTATATCGAAGAGGCGCTGGCGATGTGGGAGCCGCGTATCGATGTGCTCAATGTCGAGATTGACACCGATCCGAAAACGCCGGAACGGATGCTGATCACGATTGAGTACCGTATCAAAGCCACCCATGATCGTCGTTCGCTGGTCTTTCCGTTTTATCGTATTCCGGGTGAATAGGACGAGGATTGCATGCCGCTGCCAACACCCAACCTCGACGACCGTCACTTTCAGGACATCGTCGATGAAGCCAAACGTCTGATTCCGCGCTTCTGCCCGGAATGGACTGATCATAACGTCAGCGATCCGGGCGTGGCGCTGATCGAGTTGTTCGCCTGGATGACCGATCTGCTGCTCTATCGGGTCAATCAGGTGCCCGATAAGGTGTATATCACGCTGCTCAACCTGATCGGCATTCAACTGGAACCGCCGCAGTCGGCGGTCGCCCCGGTGACGTTCTACCTGTCGGCGCCGCAGGAGACGGCGATCACGATTCCTGCGGATACCGAGGTGGCGACGGTGCGCACCGAAACCAGCCCGGCGGTGATTTTTACCACCGAGACCGATCTGACGATCCATCCGGCGATGGTGGTTGACGATAAGGTATATACGCGTCAGGTGGAGCGCCCGAATATGCCCGCAAACTGGCGCGCAAATGAGTTGCGTCAGTTGCTGTTGCCCAACGGACGCATCGCCATGTTTGCGCCCAACCCGCTGCCGCACGACGCTTTCTACATTCCGCTGCGCCATAACCACGGCAACCACGTCCTGGCGCTGGTGGTCGATTGTGATGTGGCGCGCGGGGCAGGCGTCGATCCGACCAATCCGCCGCTGGTGTGGGAAGTGTGGCAGGGTGGAGTGGCGCGCTGGTCGCCGTGTGAGGTGGAGTTCGATGGGACAGGCGGGTTCAACATGCCCGGCGAAATTGTGCTGCACCTGCCGCCGATGGCGCCCGACACCATTCAGGGGGTGACAGCTCACTGGTTGCGTTGCCGCCTGACCGATGCACAGGCGGATACGCCCGAAAATCGGCATAATCGCTACAAAGTCTCGCCCGAACTTCTGGATTTCCGGGTCGAGTCGCGCGGCGGAACGGTCAATGCTCGCCACGCAGTGACGGTGCGCAATGAGGTGATCGGGCGCAGCGACGGCACGCCTGGTCAGGAGTTTCAGTTGCTCAACAGACCTGTGCTGTCGCGTGATCCGCAGCGTGATATCCTGATCGTCGATCCGCCGCTGCCGGGGCGCCTGCGGGAGTGGGTCGAAGTTCCCGACTTTGCTGCATCTGGTCCTGATGATCAGCATTATACACTCGATAGTCTGAGCGGTACAGTCAGTTTTGGTCCGGCGCTCCTTCAGCCCGATGGGGCGGTGCGTAACTTTGGCAGTGTGCCGCCGCACGGGAGCGTCATAACAATGACGCGCTACCAGTATGGCGGCGGCGTAGTCGGCAATGTGCAGGCGAATACATTGACGACGCTCAAGACCTCGATCCCGTATGTGTCGCGGGTGACCAACCGCCGCGCCGCCGAGGGCGGGCGTGATCCGCAGGGTCTTGATGATGCGCGCGTCCGCGCACCGCAAATTCTGCGCACCCGCACCCGCGCGGTGACCGCCGATGATTACGAGCATCTGGCGCGCGAGGTGGTCGGTGTGGCGCGGGCGTGCTGTATCGCCCCCGGCGCGCAACCGGGCAGTCCGGCGGATCCGCGCCCCGGGCAGGTGCTGGTGTGCATTCTGCCGCAGACCGATAATCCCGTCGGGCGTATTCCGCCCGAAGCGCTCACCCTCTCCGCCGAACTGCGCGCCCGGGTGCTTGAGTATCTGGATCGGCGCCGCCCGCTCGGGATTGCGCTCGATGTCCGCCCGGTCCAGTATCTCTGGGTGAGTGTCGAGGTGCGATTGCGCGTGCCTGCCCGGAGCGATCAGGCGCTGATCCGCGCTGTGCAGCAGGATGCGGAGGAGACGCTCTACCGGTATCTCAATCCGTATGTTGGCGGACCGCAGGGGGATGGTTGGCCCTTTGGTCGTGATCTGCACGTGTCGGAGATCTACGCCCTGATGCAACGCCTGCCACAGATCGAGTTTGTTGAAGAAGTGCAGATTGGTCTGACCGAACCGGGCAGCACTGCCAAACCGCAGGTAGTATCGCCGCGCCTCGATGTGCCGCGCCACGCGCTGATCTGTTCCTGGCAGCATCGCGTGTCGGTCAGCGCGTCGTAA

Protein sequences of DBSCAN-SWA_2

>NC_009523|1996654:2045788|2009823_2011371_-|WP_011956379.1|DBSCAN-SWA
MALITLDINGEHKTYPIEARGLRIGRALENDIVLNHAIVSRYHAEIVVNGRDVWVRDTNSRNGVFVNRLRIKEEQLRDGDVVQIGPFELRFEERAAQNVVLDDSRYFPVASEASGVVVPELNIDLREFFRIARRLNLIIDMGELLDAIVEEVLRLIPAQRALLLLKRENELVPRVIYPPSRQEVVISSTIVRKALEAGEVVLTRDARLEIGGTESIISANIRSALCAPLLVEQGAIGLIYLDSPGRDRFGSRERDLLAAIANQAAVTIERARLTEELRKQEASRQLFERFVSPSVARDVASYFSEHGRLREPQELIVSVLFADVKGFSSLSERLSPREVQDLLNEYLHEMTEVIFQHNGTLDKYIGDGIMAIFGAPQVNEYQDYHTTAIQAVDAALDMIEAHRRLIEKLDPSKAFDFRIGINTGPVYAGFFGTRQRLEYTVIGDTVNTAARLESRADLNSVLISEATRNAIGDAFILQEMGDYQLKGKAQLVHTYKVIGRAPARRSRAIGSMNAP
>NC_009523|1996654:2045788|2007439_2008465_-|WP_011956377.1|DBSCAN-SWA
MYRVGIIGTGKPWRSAGATGFGMAHMHARGYRAAPDAHLVALADLNLDHARSFQEQHGGDAVYQNYREMLAKERLDIVSICTWPHLHAEMVIACAEAGVRAVHCEKPMAPSFDEAKRMVAVCEASGTQLTFNHQRRFGAPFRAARDLLRAGAIGTLQRMEATCDNLFDWGTHWFDMLFFFNDETPVEWVIGQIDTRKPQTIFGVTVESQGISQFRFRNGVTGMLLTGDSAIPPLIIRLYGDEGLIEIGQSNDTPLRLWNRSASGWQNIDVGEGLHDEACHTRAILDLIDALKSGREPEVSARRALQATELIFATYESSRRRGRIDLPLTTDVPLTTITATA
>NC_009523|1996654:2045788|2022140_2022560_+|WP_011956389.1|DBSCAN-SWA
MLRYKLIHPQILAALGGAGHGSQVLIADGNYPFATGAPASAQRVYLNLAPGLLTVTDVLAALVDAIPVEAAHVMVPDAGPEPSIFTEFRALLPYLSLQPLGRFAFYDAARSPDTTLVIATGERRVYANILLTIGVVPPE
>NC_009523|1996654:2045788|2043352_2043745_+|WP_011956406.1|DBSCAN-SWA
MSDFLGVGWAFPVGLDARGRVALARQEVDIEQAIIMILLTPKGQRLMRPTFGCQIHDLIFAPNDAATAGLAVYYIEEALAMWEPRIDVLNVEIDTDPKTPERMLITIEYRIKATHDRRSLVFPFYRIPGE
>NC_009523|1996654:2045788|2029047_2029872_+|WP_011956394.1|DBSCAN-SWA
MNDRIVLRRQRQSIHHRSMRSDLSPDSSLLFASGNALRGHTFNAIAIHHHAPLGAPQTRLTVNTPGDAYEQEADRVATQVLRMSDEEVLTARAGEGIQRLTSEEEEEELLQAKEESGATPQVLAARAGEGIQRLTSEEEEEELLQAKEESGATPQVTPETQAAIDAMRGGGAPLDPTTRTFMEPRFGHDFSQVRVHTDARAATVARSLDALAFTVGNDIAFAPGQYRPGSDEGRALLAHELTHTLQQTGGAARVQRQEAGAERAASSDNATLKR
>NC_009523|1996654:2045788|2037033_2037228_+|WP_041333354.1|DBSCAN-SWA
MSEPVPPRRSAPAAPDASSADQREQSERTIDIEALAERVYRLMREEARLERARGVTVGKQRRKR
>NC_009523|1996654:2045788|2030057_2032982_+|WP_011956395.1|DBSCAN-SWA
MTVRRASPIRRLEKTGHHEIVRRTSPTDDAPTGHRFSHDFRQVRLSSAEPPVTFEAETEEAQQGESLQSEEVEATRTHPTQRVLSGSWLVQRQEGASGSASIFDEITAEAAALRPGLPTTFADYRQRIQSATFLGVSISGGVDQEMAGVLQRAERELNFTPGSRNQHGVYQIGGMDASRLHGLHSWGLAIDINTPTNPYIMHEAGEAQLDQQLAPVYDRIAWFILGRSSVIPRQIQQSSGGSREQRIGDMYDRLAEESQAMQTYFRYMQNVAELEQYLSTPEGYERYLLITHTTEPDRSMPPDIEALRRQMMADFAVLTSRPGPVIQPIENEQAGASVAPPLTYPHPERLEGRQDRPFDRGGSRRTPLRGFLDLEREVVMALTRAGLRWGACELGAESGDIMHFDMALQPLGQAVFQAIRTVKARHRSSARPAQRMTASSGDAVPDVSPAIESDIDAMRGGGAPLDPTTRAFMEPRFGHDFSRVRVHTDARAATVARSLDALAFTVGDDIAVAPGQYRPGSDEGRALLAHELTHTIQQTGGATRVQRQENVNTGSPSTGNGSSPGSGRRMISYGSQGQDVADAQQLLNQHGAAPPLVVDGIFGPKTRQATIEFQKSRGLAPDGIIGPLTWGALESGAPQPQPPGPQPQPPGPQPQPPGPQPQPVERWTNEDRTMIAAHIQPGVLTAYQASRIEPAVMALADAEYTSFRALLQNAGSAMERAFLCKALAAGRSLSDITDFAATIHGMSDNWLLRNLNVVDLNEADGVERGIIQQYGNSCGPTSVQVIRASADPIYALALRSAGPIEQASEHAVSAPDTIPNQMLAGEQKAILDTHAATGTGNPATDRTQPTGGAWVEGEMNALASATGVTYQTRIVGTQITLDAALDVLRTNLTAGIFVPIVVGGSVGDTAHYVMAMAISGNRIQIHDVATGDTIWRTEQEFKDSALNLPSGHKMLTAIDVPTAVPTTQPQPATP
>NC_009523|1996654:2045788|2037665_2040590_+|WP_011956402.1|DBSCAN-SWA
MIRRTLITRLRRHMRLARALAGRSPLAVRQAVGQPLLWAVGRADTPPRRARAPGLIRLAPDSRAFTDAYAVLPPVAPETPPVADPPRFDEQELREVASEAQAVPVETASPAPGAPAVETGASPATIIDAARAWVAQQLRDRTAVQSVDRSVAQPEPAPDSRPTAAPSPPAEVRVARPPRFLERTPPRRETSPPSQPAAPPDGSAAPSFDRSPAAWMERLRADARRRSEAATQASSAVPEEGTPPEIVASPLQGQAEQARDDGDYHTGMPDSILAPDAAPAQRDAGQDVPAQQSPLPPADMSARAPAAVPTTEPTAPADDTASAFAPPPAVAPASPGMLEPEAPSLPEGGATPAFAPLPTPAPASPGTPEPEAPSPPEGGAMPAFAPPPEVAPELSDTPETGAPLLPESSAASASPDMSETGAPLLPESSAASASPDMSETGAPSLSESSAAPAVAHPSAAIQGSPRAPEESESSPAGLIASPERGSAPVFDRSPAAWMERLRADARRRSEAASQSAPQASGEGATPLTPESAAQPVQRRIERRGGADHERVAAVQGDAGQDVPVRQSTHLDMPARAPEPVAAPVDDDAPEFDRSVEAWMERLRADERRRQKEAAQSPDRSSVEASQPLPDAPPVAQPAGAPQSGGALWVESGRGQQRSGAQPTGASQPGIAASPARATRFAPPVGAAVRSTTPGGARLPARPAPSAPLLSESNRRFLRAAVGVDPATVRLSRGQDAGRLTSAYRADAVTFGDDVALAPGRGDETAEGLGLLAHELTHVARRRDPTAIPPIARPAERRPGFRPASPGPATDEEALARIVEAQTVQAARMRFAPPVFPARAEAPVAQPFDKQESARTAPPVEDAPAAPDRGRWGNLPAPWEPLPDWLAPSRSVEAPPLPVVTVAPAPPAFTTPPQPGAPVVHAAETARTLPAPQQRETPAQEQAPAPAPDIDALARQVYAVLKRRLAAERRRSGWE
>NC_009523|1996654:2045788|2043055_2043346_+|WP_011956405.1|DBSCAN-SWA
MPPAARVGDMHTCPLSDGPKPHVGGPIMPPGVPTVLIGGLPAAVVGGMATCAGPPDTIIKGSATVMIGGMPAARMGDQTAHGGVIVMGFPQVDIGG
>NC_009523|1996654:2045788|2036036_2036477_+|WP_011956399.1|tail|DBSCAN-SWA
MTDKDPLISAWFGVDFGDGVVGAFRECTGLGSENEVVESKASGPDGKYIIKKIPGRMKWNNITLKRGITDAMDMWKWRKMVEEGDIQGARRNGTITMFNTRGEPVARWKFVNAWPSKLTGPDANATNNEVAIETLEIVHEGYERVQ
>NC_009523|1996654:2045788|2033430_2034393_+|WP_011956397.1|DBSCAN-SWA
MIADLHPAIRHLLFSRGLIPSDEVDVRFERPTKEWLDSLVRPTINLYLFDIEENTDLRQTNMPVMRGSGGATYRMPPRRFDLRYMVTAFTTVADDEYLLIYRALATLLRYPTLPPSALAAAMAVIAGREGSGAEQARFAALADAGERTTSRDLRSAVASAELGSSTRAAMLALLDDPPITARIATGDEGPRLLEVWNTLEQAPRPSLLYIMTIPVDLDLAIDTPLVLTRMLRIRQRTEAGGSAEHMRIGGVVRDQHGTPLEGVVVGIEGGAIETVTNNEGRYALSHVPVGKVTLRVTRPDGSVRIIPVETPSDTYDISLD
>NC_009523|1996654:2045788|2011513_2012101_-|WP_011956380.1|DBSCAN-SWA
MNARQLITAISMIAGGWLLLWSIGSIVIASRPMQAQELPPRPTLTPVVASEEPRREPRLGRIVGTVIDLTTGAPVAGMTVRINDQELLTDTNGNYGRENLMPGTYVVELIVPPERGTSVQGAIPITLPEGETARQDMAFRSPARVAAPEPSGDAAPVPPPATLPATGASNEAPWMAVLGMILLAGGVLIARRATP
>NC_009523|1996654:2045788|2022572_2024141_-|WP_011956390.1|DBSCAN-SWA
MSTSNDHSDRQRDDMITLRVPRGALTALWTLGSLIALLLVALAFIAGLALRPALPAAAPVQVPVIVDPAPVAPSIVTLSASPLPLPVTPAPPTSAPTSEPAVQPTLELIRPTEAPAIPAPTDAAPVIPAPTGVDADPPAAVDFRIEPQPAAVQPPAAPVQAAAQPPPAARPADSGGGGASRPAPTTRPPVHALRGNVRWLTANSPVIIQNDLLVSSGASLIIEPGVEVQIGKGASLVIDGSIVALATPDRPVRFTQIGGGDDPRLRWESIIGRAGSVIDLRNVLITGGGGGGTVLAMQSGRLSLQSARIVNNGGHIRVEDSFVIIRDSEISGNRMPYGSAIDITLTRGGGGSPGSDVVIINNRILNNALVAGTAPLRVTNLSFERPARIEIEQNLLVGAAGPNLALFTNAQLMGNIRCNTLIGGANGLSLRSDAPPNLSPMLNIRDNAIEAHEPPNNPFYRQFNIGKGATSDLPLTMTNNWWEVANGPYEPALNPEGRGEAAGPNIAFQPWLQTRPACAPSF
>NC_009523|1996654:2045788|2014893_2016012_+|WP_011956382.1|DBSCAN-SWA
MQAGRAMNQGIAVDLRNVVKRFADVCAVDHVSMQIRDGEFFSMLGPSGCGKTTTLRMIAGFEFPTSGDILLHGRSVGTTPPFRRNVNTVFQSYALFPHMTVAENVAFGLRMKKVPQSEIARRVTEALDMVRLGDFAARRPRQLSGGQQQRVALARALVNHPEVLLLDEPLGALDLKLRKEMQLELKSLQERVGITFIYVTHDQEEALTMSDRIAVMSAGKVLQIGTPTEIYERPVCRFVADFIGETNFIEGKVEAVERDGIASILSDDGLTLRGQTIRPVASGAHVTLSIRPEKAFLSVQAPPPGTPNCYQVRVERVAYIGSDTRIDVRLGSRLFDLWEQNSRSTLDRDAYWQPGETGYLWWPAENAIILTE
>NC_009523|1996654:2045788|2027358_2029011_+|WP_011956393.1|DBSCAN-SWA
MTERQRIFLQRRRPVETAAQRSTARAVAEQSAPVSTGHLFNQMRLGALFPATLPHVQRKEPSSDATTSTGAPANGLVTVDAAINPLVGLKRGDGLTYGTWDLRPRVKLLQHKLNEKTGAGLNVDGMWGPKTSAALESFMLSRSTVPAEIVDQNTADALLDRKKETPGPGPQPIPPGPQPVESTYNQTLEDTLDAVWLQYQLTFEGQRGGLQKLEKDLAQIEKPKNVIVEALKDAGKAALDALLGLGGGALRVPIKAALAGLGETIAKDGVDKVFDKAQEAASTEVGKKVDELGSEDGPTLETFIEAQRAALEEASSQTQEAFLLETRARLRQPASGEPVSSGPEDPRVLRARRLLNAVKQERPQAFQKQYDESLAKWAIAQAQSKLGTMDSPSRSVGDEKVKTTDMSKAKPDMPGVLTFEIEGTKPDMPVKITGAKIVGLSEKTRQTLERQQRSILDLGLPRYASGKVEINTGLGSILNFTKPTIRIAQNETSDLFERESTEGGKEWLKKKARPFEEVLTEDLVKEGMRMVWEEIDRKRLSEVPGGLKGP
>NC_009523|1996654:2045788|2016033_2016942_+|WP_011956383.1|DBSCAN-SWA
MAADTLASDSQPREGRIAAILRRNERLQLGLLLFPGLFWLVMFFALPLIVVVFYSFAVNGPGGRIEWTFTLENYRILFTESLYVNAYWRSIWAGVWTTLICLLLGYPLAYYIVRSPPRWRTVLLFLILIPFWTNFLVRTYAWMLLLSNNGIINSAIQSLGLPRVALYPSEGAVLVGLIYGSLPFMVLPIYASLSRFDFTLMEAAADLGASQVRAFLKVMLPLTMPGVAAGSVLVFIPTVGQFVVSDLLGGAKVDYLGNLLQRLFTRSNPPNWPLGSAMAIVFMVVLTVAIIIYFRVTTEEDR
>NC_009523|1996654:2045788|2037232_2037661_+|WP_011956401.1|tail|DBSCAN-SWA
MPTTEEAYPSYRFYVEIAGVPQAVFTEVSGLQIETEITEYEEGGNNDFVHRLPGRTKIGNITLKRGMTSSNELLQWFLKIARGSIDRRNVTVIMYDSAGKELFRWNFIEAYPVKWTGPQFTAASTEAAVETLELTHNGMTIG
>NC_009523|1996654:2045788|2005848_2006571_-|WP_011956375.1|DBSCAN-SWA
MTTTDDTPSSPPLVLASASPRRRELLAYLGVPFRIIATDAEEHEHDPPAEIVAALPPLALPLFDHPTLRAWRKAHAACASAPDSVIIGADTIVALEGTVLNKPVDPDDARRMLRRLAGKTHTVYTGLAVIDARRADASPLLDLVASQVSIAPLSDADIDAYVATGEPLDKAGAYGIQGLGGQLVHAVTGSYTCVVGLPLVETYRILSAAGIRGLRDPVEGYRRWLRDQGKETPSCPSTLP
>NC_009523|1996654:2045788|2017051_2018014_-|WP_011956384.1|transposase|DBSCAN-SWA
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPYTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTIKRTEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523|1996654:2045788|2001707_2002964_-|WP_011956371.1|DBSCAN-SWA
MHFLHVVQLYHPVASGAGRYFRAIGERLAAEGHRVTVLATDAHDLEHIWMPGRRRVETATEWFNGVQIVRLPIVRRPGPPLIYPVIRRLMTEISRLPNTTPLLQRLATWTPRWPGVETFFEQYGPFDLVHATNITLDFALLPVFACAQRQRIPFLCTPFIHLGEPGSRAIVRYYSMRHQIDLLRRSERVITMTGLERDFLAARGVTHERLRVVGVGVAPEDLQGGDGDRFRAEQRIDGPLVLFIGALAYDKGAIHLIKAMQRLWRAGHPGTLALIGAPLAHFEAFYARLPQSDRARIRFLPYAPEAVKRDALAAADVFVLPSRTDSFGIVFLEAWCYGVPVIGARAGGIPDVITDGGDGLLVRFGDVAGLAQAIRVLLDDRALARRLGAAGREKTLRSLTWDHVYARVRAVYAEVCGL
>NC_009523|1996654:2045788|2043757_2045788_+|WP_011956407.1|plate|DBSCAN-SWA
MPLPTPNLDDRHFQDIVDEAKRLIPRFCPEWTDHNVSDPGVALIELFAWMTDLLLYRVNQVPDKVYITLLNLIGIQLEPPQSAVAPVTFYLSAPQETAITIPADTEVATVRTETSPAVIFTTETDLTIHPAMVVDDKVYTRQVERPNMPANWRANELRQLLLPNGRIAMFAPNPLPHDAFYIPLRHNHGNHVLALVVDCDVARGAGVDPTNPPLVWEVWQGGVARWSPCEVEFDGTGGFNMPGEIVLHLPPMAPDTIQGVTAHWLRCRLTDAQADTPENRHNRYKVSPELLDFRVESRGGTVNARHAVTVRNEVIGRSDGTPGQEFQLLNRPVLSRDPQRDILIVDPPLPGRLREWVEVPDFAASGPDDQHYTLDSLSGTVSFGPALLQPDGAVRNFGSVPPHGSVITMTRYQYGGGVVGNVQANTLTTLKTSIPYVSRVTNRRAAEGGRDPQGLDDARVRAPQILRTRTRAVTADDYEHLAREVVGVARACCIAPGAQPGSPADPRPGQVLVCILPQTDNPVGRIPPEALTLSAELRARVLEYLDRRRPLGIALDVRPVQYLWVSVEVRLRVPARSDQALIRAVQQDAEETLYRYLNPYVGGPQGDGWPFGRDLHVSEIYALMQRLPQIEFVEEVQIGLTEPGSTAKPQVVSPRLDVPRHALICSWQHRVSVSAS
>NC_009523|1996654:2045788|2018270_2019128_+|WP_011956385.1|DBSCAN-SWA
MVDVQMSQSVRVAGSERRRSLGSLALSAHTALTLAFLYAPIVVLVLFSFTRDSFGVRWTGFTFDWYVRLLADQRLLNAAMNTLIVALISTVVSTVIGTMTALAMERYRFRGRTGFDALLYLPIVIPEIVMALALLAFFAFSFGLLESLFGVRFQFGLATVTIAHIAFTISFVVVVVRASLKGFDMRLEEAAQDLGANEWQTFRYITLPLIMPGVIGGALLAFTLSLDDFVITFFTTGSGVSLLPVEVYGQVKRTITPKINAISTLMLLMSITLVFLSQFVQRRRE
>NC_009523|1996654:2045788|2024425_2025004_+|WP_011956391.1|DBSCAN-SWA
MSSALAIASVTAFLKNLLENGLVDEGINASIGGDAVVSALPPDRITTGTDERPQLNLFLHQVTPHTGLRPRERSDRRALLGLDLHYLLTAYGAQDFQIEILLGYAAQVMNRTPIVRRDVLRSTLSTLASSDNGGIPTPTLQALTSCDLDTQVDQIEVRPQYLNGEELSRIWSALQARYRPSLAYKVSMVLIG
>NC_009523|1996654:2045788|2002963_2004007_-|WP_011956372.1|DBSCAN-SWA
MRFPVICLVIMLLTACASSAPNPTPAPALLPATAPLPEPGAPQPTVIAAGVRLPGRLLFVRDGTIWMWQDQTGRPLIGDDQAVQPVWAPDGSAIAYIQRDQSSSDLMIAPLDGGGPLRLTNNGSRHPPGSFERISDSVWAFYPSFAPDGQTIAYASQYAPPSGSPAAEYHLALFTIPAQPGGVRRLIYADDTGHVGRVTHTPDGSAIVFTLEPAYAGGSSQIMRYDRTTGTVAPQPDVPSGSYDPAFSPDGRWLAFAGRDGDRTDIFAVPAAGGTIVRLTGLGTARAPAFSPDGRRIAFLAVAPGETGFDLWVADIRIIGDSIQASSPRQVSMGLRADADSGLSWGK
>NC_009523|1996654:2045788|1996654_1997617_-|WP_011956368.1|transposase|DBSCAN-SWA
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGVPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTIKRTEAAAFVGVAPYANQSGAQHKPRHISGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523|1996654:2045788|2004009_2005113_-|WP_011956373.1|DBSCAN-SWA
MSNLDRFTALHQAAPTSLDGSDGLPRDARALIVLNPYAGQASSLRQNVEEARNVWLTHGWTVDVEMTHQPGDGIRLAREAAEQGYDVVAAAGGDGTINEVINGLAGTRTALAALPIGTVNVWVRELGFPLEPRAAAAALLHARRHRIDLGRAGDRYFLLMAGIGFDAAVVNEVRSDEKRRLGALAYVVRAFDLALRYRGRRARIALDGRIIRGRVLLVVIGNSQLYGGVFKITARACIDDGLLDVCIIKGDSLAEAPLRLFSILRQRYNLDPRIEYHRARVVHIDTRGALPVQVDGDQSGSTPMTFSVAPGALYALLPQTPPADDLLRAAPPRRRRMWQRVIGWFARRMAFSDAPGRRGAPVPPHQV
>NC_009523|1996654:2045788|2041272_2043042_+|WP_011956404.1|DBSCAN-SWA
MSDNRHVADLYLKLDGADAPRELVGDMLEITVENSLHLPDVATIVLNDRRLKWVDDSRLAPGGLIEVSARHGRTTESIFDGEIVEIEPQFEAEGLKVTVRAFDRLHRLGRGKHTRTFLNVTDSDVITQLANEAGLQVQIDATTQVHPYLVQWNQTNLEFLRERAAALGYLMYVRRKTLHCTRLPSPGAPVELKWGTDLVAFRPRLSTIDQVNEVTVRGWDPLEKKAVVGKATSASVAPRIGAPETGGKLAQQAFAIKAEDALESAARIQPEAERIARAILAHHESRGVEAEGTAAGNPKIVAGAAVKITNVGTRFGGTYVVTSATHRYDASGYVTDFSVSGMNPATLLSLVQPETPRLNFEGLVIGVVTDTNDPDKRGRVKVKFPTLADQQSDWARVVSVGAGNRRGIEFLPEVNDEVLVGFEHGDVRAAYVIGGLWNGKDQPPKAPAEIVKNGKIEQRVIKSRSGHIITLDDSDSAPSITIEDKSGNVIKLDSKKNELTINVKGDGTISADGNLTIQAKGKVNIKSQQALAIEGSTGLDLKSNASASLQANANLDLKASAAATLQANATLDVKSSAILTIQGTLVKIN
>NC_009523|1996654:2045788|2008486_2009707_-|WP_011956378.1|DBSCAN-SWA
MPVVVGIRFKDSGKTYYFDPNGIEALSQGDHVIVETVRGPELAKVAYPPRLVDPEEIVGELKPVLRRAEPIDFERLRQLNSHQDELLARCAEKIQEHGLPMRLVKAEYSFDGSRLTFYFTAEKRVDFRALVRDLARAFRTRIELRQIGPRDEAKLLGGIGPCGRLLCCATFLPDYARVSIKMAKDQDLPLNPTKISGVCGRLLCCLSYEHDQYVSVKSRMPRKGTWVQTPDGPGEVVGVNVLRETVIVALASTGMQEEFSPTQIQEAIRQVGEIARSRNAEGITPAARLNRSERRAEQERRGEKRLLRDSIDNPDVLEALAWLEEGAGDPPLELLEEEDLDMLSDDLPMVPQPSKRSAAPPSPKKSAGHHHDSGTRTDERTPSAPDTASQSSTSQRQRRRRRPRNS
>NC_009523|1996654:2045788|2025026_2026988_+|WP_011956392.1|DBSCAN-SWA
MAAISAETWEQINHRALGVALARVRTALERYVRGERPVSEQPAAPEADDGGNRSALATLCAAFRLSPFERDLLVLCAGVELDASFAALCAEAQGDPQRVLPTFSLALAALPGAHWSALTPDAPLRYWRLIEPAPGGLLTRAPLRIDERVLHYLTGIACLDERLRGLVAPVRAFDALLPSHQALAQRIAGAWRRTRGRSLPLIQVCGDERVTRQAIAAAACASVGLELYVLHAALLSPVLADVETLIRLWEREAALSAGALLVECDDVDPAETTRASMLTWLLERTGGALIVSARDRWRPTQRVTVTVDVQRTGSDEQRDAWRTALGAAAGNLDGQMDVLVSQFNLSAHAIRAASADALGRLDGDAGHDIAQAVWDASRVQARPRLDDLAQRIESSVTWDDLVLPAPQRQVLRDIAAHVRQRARVYETWGFAARSSRGLGISALFAGASGTGKTMAAEVLANELHLDLYRIDLSSVVSKYIGETEKNLRRIFDAAESGGAILLFDEADALFGKRSEVKDSHDRYANIEVSYLLQRMEAYRGLAILTTNLKSALDTAFLRRIRFVVQFPFPDAAQRAEIWRRSFPLGAPVENLDFDKLARLNVAGGNIRNIALNAAFLAADAGEPIRMMHLLRAARTEYAKLEKQLTESEIAGWV
>NC_009523|1996654:2045788|2012121_2014425_-|WP_011956381.1|DBSCAN-SWA
MRPSRRFSLVVLLLVMTLATGWFLAIPVSRAATFTIPCSDVSALITAINTANSNNQPDTIELAAGCTYSLATVDNTFGGSANGLPVIIVDSSSTNSLTINGNGATIERVAGSPPFRFLYLRDQTFVNTVVVTINDLTFRNGDTDNDEGGAILARNARLTLNRVAFENNQATFDGGAVVARNSELTLNRALFENNRALTAGSAEGGALYTVNATTTITDSIFRNNRSERSGGAITFRTDGFVDPATVTGTTFSGNQTTGEGGAIAAYHDVTVSNSTFSGNQAGDNGGALFSDMGAQLEHVTMTGTQTGGNGALYGTATLRGSLIAGNADTSPGGGENYPDIAGSLSSNGYNLIGNVGNYDFAANTTGDQYGDPVGTTTPNTGAIESSTPINPLLAPLASNGGPTPTHALTGGSPALDQIPASACSVTTDQRGVSRPQGSACDIGAFEAVPAPEIAVYDGPDASSPELTNNQATAVSFGTTTVGAPVARVFTIRNAGTAPLTLGALTLPAGFVVVGAFPGGPVAPGATVTFTVQLTAATAGTFSGTLSFVNGDADESPFRFPISGVVTAATPSLQQAYLPLIMRPGQPDLIIASIEIIPNQTTFAAGQLVEIRVTVKNVGTAPAGPFWVDLYLNPDRPPRVNDLWHDRCALQPCFGVAWGVTQALQPGEQITLSTSGGYDALRTYWLGWLANDTTTIYALADSWNTVGVSGAVFESDETNNRGIRDGLIVSGTNPPAPPWTPSYLAGPAHSSLLPDRPAYARPGGKIER
>NC_009523|1996654:2045788|2040602_2041280_+|WP_011956403.1|DBSCAN-SWA
MPDTSLVKAKIINLDDPSQEVECLFNPKEYTFTKQNSWSRGETPSTNVPQLEFSGGQPATLSMHLLFDTYTSARPGSKPRDVRKVYTDKLWSFMMIDPNLQDPKSTRGRPPKVRFQWGTSWSFKAVITNITQKFTLFLVDGTPVRAELDVTFQQIEDTANLQPQNPTSGGVGGERVWRVRDGDTLAWIAYKSYGDATRWRPIAEANGLERVRELTPGAVLVIPHE
>NC_009523|1996654:2045788|2036660_2037029_+|WP_011956400.1|DBSCAN-SWA
MLQTEFPFVLPCGYVDDQGNLHREGSMRRATAIDEIEPLEDPRVQRNEAYLSILLLSRVVTRLGTVGVITPAIVERLFATDFLYLQDLYIQINAAAPHVVETQCPTCGARFAIDVGVGDMTG
>NC_009523|1996654:2045788|2019188_2020379_+|WP_011956386.1|DBSCAN-SWA
MLKRRMRLGTLLLVVLLALAACGGQPTGSPGNEYGSGGATEPTTAPGATQPPAGDELQVDRSRLSRELRFFNWTDYIDPSILEDFEKEYGVKVIVDLFDANEDMLAKVRAGRSGYDIVTPSDYAVEIMWRDGLIAKLDKSLLPNLKHIDPDLLDKYFDPGNVYSVPYMYGITGIAYNRSFFPNGVDSWAALFDTAQIEKYRGQFSMLDDERETPGAALRFLGYSLNETSPEALKKAQDLLIAQKPYLAGYNSSDVNRKLASGEYVIAHAWSGSALQARNGLGDEFSGNPDIAFVIPKEGGMIWMDNMVILADSPNAYTAHVFMNFLMRPDIAARNAEYIGYLSPNVEGIKLLPQEIIDLYNEGFAPNDEVMKRLEWAIRNEQTAAFTDLWTAVKGE
>NC_009523|1996654:2045788|2034405_2035971_+|WP_011956398.1|tail|DBSCAN-SWA
MPEYLSPGVYIEEVSSGPRPIEGVGTAMAAFVGFAAAGPVNQPVLVTSWTQYVEKFGRLDESGRRNPHMDGAYLSHAVYGYFLNGGGRCYVTRIPQQSDGKAPQMPRLELPTRASKALTSLIVTPKSETASDIQVEIGPPVGENPPPEAFTVKISMGEIKEVYENVSFNKRPKDGTSYVVEKINSSSTLVQVAEGPATGSLADRVPEFGMSVIKPPAPLAPARVDATSFVGSAAERSGVEGLEIAEDVTMICAPDLMSAYQSGAITKEGVKAVQLAMIAHAERMQDRMVILDPLPGLTPQQVKQWRERDTNYDSKFAVLYYPWIKIMGPDGKTEMEIPPCGHIAGIWARNDNTRGVHKAPANEVVQGALGPAIAITKGEQDVLNPIGVNCIRSFTGMGLRVWGARTLSSDAAWRYVNVRRLFNYVEKSIERGTQWVVFEPNDPNLWARVKRDVEAFLTVCWRDGMLFGLTPREAFYVKCDEELNPPEVRDQGKLIIEVGLAPVKPAEFVIFRFSQFAGGGA
>NC_009523|1996654:2045788|2021770_2022064_+|WP_011956388.1|DBSCAN-SWA
MKQRYYTIKAAAALCGMHEQSLRLYERRGLIRPQRTPGNIRRYSESDIEQIRFIKRLIDDLGVNLAGVEVILHLRQQLIEVQRELEELRSRMPVDAS
>NC_009523|1996654:2045788|2006567_2007416_-|WP_011956376.1|DBSCAN-SWA
MHYAHTVIPGTQVRLRDIDPDASGGLTKDEGRERFASFNATLDAMQEELYAAGVHALLLILQGMDTAGKDGAIRNVMHNLNPQGCRVESFKVPTEEELAHDFLWRVHKVVPRKGMVGVFNRSHYEDVLVVRVHSLVPEHVWRARYDQINAFERLLTDTGTIIVKCFLHISKDEQEKRLLAREQDVTKAWKLSAGDWRERERWDEYMAAYEEALTRCSTEYAPWYIIPANRKWYRDLAISEVLVETLRPYRDDWQRALDAMSQARLAELKAFRHQQTAGATRL
>NC_009523|1996654:2045788|2033007_2033424_+|WP_011956396.1|DBSCAN-SWA
MPIDPHRDYTRQDQLALDLTELFAGGLRDEHGQLPLTLQGIGSAAMALQTEQAGVPLPMFNRMLTTANEISLQRARAMPEELVEELEKRGFPQIARIIRAGIDACRDDADYRNFVRWLIQVRNLIVFRAQTGGAASRK
>NC_009523|1996654:2045788|2005105_2005870_-|WP_011956374.1|DBSCAN-SWA
MSVNPPVKLLIVDDHPLFRQGVRAALSTYQDILVVGEASSGEEALAWMNAAPPNQEPNTVVVDLNLPGMNGLELTRQLRLNYPGVGIVVLSVYESDEQAFNALRAGASAYRSKDVNPAELAQVLRRVARGEYVINDVVLDDPKVAGRVLSQFRNLPQDLTNLPEVEFPLFTPLSDREIEVLERIAAGGSNREIAEALHISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIEAPGTIRSGPPSSDTEDDEDE
>NC_009523|1996654:2045788|2001023_2001305_-|WP_011956370.1|DBSCAN-SWA
MSDIANMSRQERINAYWKENNRLIAILLIIWFSVAYIPPLFVNQLNQIVIAGFPLGYYFGSQFSLVVFVILIFYYAYAMNKLDAKYHLKDRDK
>NC_009523|1996654:2045788|1998834_2001003_-|WP_011956369.1|DBSCAN-SWA
MAVNEAVKLRNNRLAQYYGMFTVGLIVFALIMGALELGAGMPKAWIGWTFLMLTMGMYAFIGIMSRTKILDEYYVAGRNVPAVFNGMATGADWMSAASFISMAGTLYALGYDGLAYIMGWTGGYVLLALLFAPYIRKFGQYTIPDFVGTRYGGRWPRLVAAICAIIVSLTYVTAQVVGVGIIMSRFIGVPYEWGVVIGLSGVLVCSFLGGMKAVTWTQVAQYIILIIAYMIPVTFLSLKLTGFPIPQLSYGQALQNITRLESELKIATESKARDGTGRVIQGGYVPAYNEGLSNAAAVTAINQINTYFGVNITPPKAQSIPDTSKPAEEIQPDWRGTPWNFLALTFCLMVGTAGLPHILIRFYTVPSVRESRLSVGWALFFIFLLYFTAPAYAAFARWEILQNVVGKEISSLPEWTQNWSRLGLITQRDYMTLNGRDIDKLPAWAAPQVKSGALVITDANGNGKIDLAGATFSETEVDGKKIGTFGELSGTAITKTSVDGILQFSELNIDPDTIVLATPEIAGLPYTVAALIAAGGMAAALSTADGLLVVISSAIAHDFYYRIINPKASMNTRIWLGKTMLVVAAVIAALLALPRLALIAQMVAWAFSMAASSFFPVVLLGIFWKRCNGPGAIAGMVGGLSVTLFYMYSNYVDPSFNVLGITHLAAGIFGMPVNFLLCYIVSKLTAAPSQEIQDLVDHLRSPELDDELMTSIASGKQAAGAR
>NC_009523|1996654:2045788|2020820_2021750_+|WP_083763276.1|DBSCAN-SWA
MPCSSSYNNGAQSHSLESRSMAFKDYYEILGVDRNATDAEIKKAYRKLARQYHPDINPGNKAAEARFKEINEAYEVLSDKEKRAKYDRFGRDWQRYQDVTDFGGFGAGDFADIFETLFGGGRGVRSSVTYRTRGQDIEQAVDITLEEAFSGTQRTLQLQSPNGQIRSLTVRIPPGVDTGSRVRIAGEGAPGMGGGPRGDLYLVINVAPHPRFERRGDDLYVRAPVDLFTMLLGGEVKVPAMGGRTVTLKVPAGTQNGKVMRISGQGMPRLRESQSRGDMYVTLEVALPTHLSPQERALFEQLRAMATAR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011956368.1|1996654_1997617_-|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011956369.1|1998834_2001003_-	cation acetate symporter	NA	NA	NA	NA
WP_011956370.1|2001023_2001305_-	DUF4212 domain-containing protein	NA	NA	NA	NA
WP_011956371.1|2001707_2002964_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_011956372.1|2002963_2004007_-	hypothetical protein	NA	NA	NA	NA
WP_011956373.1|2004009_2005113_-	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	3.6e-17	23.6
WP_011956374.1|2005105_2005870_-	response regulator transcription factor	NA	NA	NA	NA
WP_011956375.1|2005848_2006571_-	septum formation protein Maf	NA	NA	NA	NA
WP_011956376.1|2006567_2007416_-	polyphosphate kinase 2 family protein	NA	NA	NA	NA
WP_011956377.1|2007439_2008465_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_011956378.1|2008486_2009707_-	stage 0 sporulation family protein	NA	NA	NA	NA
WP_011956379.1|2009823_2011371_-	FHA domain-containing protein	A0A218MLZ2	uncultured_virus	2.3e-22	33.2
WP_011956380.1|2011513_2012101_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_011956381.1|2012121_2014425_-	choice-of-anchor D domain-containing protein	NA	NA	NA	NA
WP_011956382.1|2014893_2016012_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-26	37.9
WP_011956383.1|2016033_2016942_+	ABC transporter permease	NA	NA	NA	NA
WP_011956384.1|2017051_2018014_-|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011956385.1|2018270_2019128_+	ABC transporter permease	NA	NA	NA	NA
WP_011956386.1|2019188_2020379_+	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_083763276.1|2020820_2021750_+	J domain-containing protein	A0A1V0SF83	Hokovirus	1.4e-22	24.6
WP_011956388.1|2021770_2022064_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011956389.1|2022140_2022560_+	transporter RbsD/FucU	NA	NA	NA	NA
WP_011956390.1|2022572_2024141_-	hypothetical protein	NA	NA	NA	NA
WP_011956391.1|2024425_2025004_+	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_011956392.1|2025026_2026988_+	ATP-binding protein	A0A2D2W2C3	Stenotrophomonas_phage	3.8e-09	33.1
WP_011956393.1|2027358_2029011_+	hypothetical protein	NA	NA	NA	NA
WP_011956394.1|2029047_2029872_+	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_011956395.1|2030057_2032982_+	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_011956396.1|2033007_2033424_+	hypothetical protein	NA	NA	NA	NA
WP_011956397.1|2033430_2034393_+	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_011956398.1|2034405_2035971_+|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	9.5e-64	33.1
WP_011956399.1|2036036_2036477_+|tail	phage tail protein	NA	NA	NA	NA
WP_011956400.1|2036660_2037029_+	hypothetical protein	NA	NA	NA	NA
WP_041333354.1|2037033_2037228_+	hypothetical protein	NA	NA	NA	NA
WP_011956401.1|2037232_2037661_+|tail	phage tail protein	T2KTT5	uncultured_phage	1.1e-11	34.7
WP_011956402.1|2037665_2040590_+	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_011956403.1|2040602_2041280_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_011956404.1|2041272_2043042_+	VgrG-related protein	NA	NA	NA	NA
WP_011956405.1|2043055_2043346_+	type VI secretion protein	NA	NA	NA	NA
WP_011956406.1|2043352_2043745_+	GPW/gp25 family protein	A0A126HGC9	Vibrio_phage	3.5e-07	36.0
WP_011956407.1|2043757_2045788_+|plate	putative baseplate assembly protein	NA	NA	NA	NA

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NC_009523|4584386:4650453|DBSCAN-SWA
TATGGGCATCTGGCAAACGAATCATCGGATTGACTGGACGTCGCCGCGCGTGGATGCACTCATCCCGATGGTGGTCGAGAGCACCAATCGCGGCGAGCGCGCATACGATATCTACTCACGGTTGCTGAAAGAGCGCGTGATTCTGCTTGGTACGCCGATCGATGATCAGATCGCCAACCTGATCGTCGCGCAGTTGCTGTTCCTCGAACACGAAGACCCGGATCGCGATATCTGGCTCTACATCAACAGCCCCGGCGGTTCGATCACGGCCGGTCTGGCGATCTACGACACCATGCAGGTCATTCGCCCCGATGTGGCGACGGTTTGCGTCGGCATGGCGGGCAGCATGGCGACGCCGATCCTGGCTGGCGGCGCGAAAGGCAAGCGCTACAGCCTGCCGCATTCGACGATCCATATGCATCCGGCGGGTGGCGGTGCGCGCGGTTACGCGCCCGACGTCGAGATTATGGCGCGCGAGTTGCTGCGCGAGCAACAGTTGATCCGCGAACTGCTGGCGAAGGATACCGGTCAGCCGCTCGAACGCATCGCGCGCGACTTCGACCGCGACCTGTTCATGGATCCGCAACAGGCAAAAGAGTATGGTATCATCGACGAGATTTTGACCCGTGAAGATCTGCCGGCTGCCGGCGAGCGCCGCTGAACGGCTACAGGAGCGCGTATGTCTCGCACACGCAGCGGTAACGCAAATTCGTCGAATAATCGCGGTGCATACCTCTGTTCGTTCTGTGGACGGGGACAGGAAGAGGTGCAGCGCCTGATCGCCGGTCCCGGCAATGTGTTTATCTGCGATGAGTGCGTCGCGCTGTGCAGCGCGATCATCGCCGAAGAAACCGGGACACGCCCGTCGACCCGACGTTCCTCCGCCAGCCTGCCGGCGCGCCTGCCCACGCCGCGCCGCCTGCGCGAATGGCTCGATCAGTATGTCATCGGGCAGGATCGCGCAAAAGTGGTGCTATCGGTGGCGGTCTATAACCACTACAAGCGCCTCCGCGCCGGGCAGAATGCTGATGATGTCGAGATCGGCAAGAGCAATATTTTGCTGATCGGTCCGACCGGCAGCGGAAAGACGTTGCTGGCGCAGACGCTGGCGCGAGTGCTCGATGTTCCCTTCGCTATCGCCGATGCCACCGCGCTGACCGAGGCAGGGTACGTCGGCGAGGATGTCGAAAACATTCTCCTGCGGTTGATCCAGGCTGCCGAAGGTGATATCGAACGCGCGCAGACCGGGATCATCTACATCGATGAGATCGATAAAATTGCGCGCAAGAGTGATAATCCGTCGATTACGCGCGATGTGTCGGGCGAAGGGGTGCAACAGGCGTTGCTGAAGATTCTCGAAGGGTGCGTGGCGCATGTGCCGCCGGTTCCCGGTCGCAAACATCCGCAGCAGGAGTATATTTCGTTCGATACGACCCACGTGCTCTTCATCTGCGGCGGCGCCTTCGAGGGTCTCGACAAAATCATCAGCCAGCGCATCGGCGGCAAGCGCAGCATCGGCTTCCACGCTGGCGAGTCTTCCGATGCTCCGGCATCGTTGCTGTCGCAGGTCACGCCGGATGACCTGCTGCGCTACGGTTTCATCCCCGAATTCGTCGGGCGGCTTCCGGTTGTCGCGGCGCTCGATCCGCTCGATAAGCAGGCAATGATCCGCATTCTGACCGAGCCGCGCAATGCGATCATCAAGCAGTACCAGAAGATGCTCGCCCTCGACCACGTTGAACTCGAGGTCACGCCCGACGCGCTTGAAGCGATTGCGGAGCGGGCGCTCAGATCAAAGACGGGCGCGCGCGCGCTGCGCACGATCGTTGAGGAGATCCTGCTCGACGTGATGTACGAAGTGCCTTCGCAGGAGCACATCGGGCGTTGCATCATCAACGCCGAAGTGGTCGAAGGGCGCGGGCACCCGATCCTGGTGCCGCGCTCCGCTGAACGGCAGGAGTACCGCCGACGCATGGACGAGGCTGTGTAACGTTCCCTGGAGAAACCTATGACCGCGCCGCAACCCACGGAACCGCGCGCGACAATCGGCGTCATTGGCGGGAGCGGATTGTACGCCATGGAGGGGCTTGCCGACGTCGAGCGTGTGACGCTGGAGACCCCGTTTGGCGCGCCGAGCGACGCGTATGTCATTGGAACCATCGCCGGGCGTCGTGTCGCGTTTTTGCCGCGTCACGGCGTCGGTCACCGCTTTTCGCCGAGCGAAGTTCCGAATCGCGCCAATATCTATGGTTTCCGCATGCTCGGCGTTCGCTACCTGATCGCCGTGAGCGCCGTCGGCAGCCTGCGCGAAGAGTATGCCCCCGGGCACATCGTCATCCCTGACCAGTTGTACGACCGCACCAAAGGACATCGCCCCGACACGTTTTTCGGCGGGGGGCTTGTGGTGCATGTGCAGTTCGACCGCCCGTTCGACGCCGGGCTTTCTGATCGTCTGGAGCAGGCGGCGCGCGCTGCCGGCGCGACGGTGCATCGCGGCGGGACGCTGGTGGTGATGGAGGGTCCACAGTTCAGCACGCTCGCAGAAAGTGAAGAGAACCGGCGTCGCGGGCATGACCTGATCGGCATGACCGCGCTGCCCGAAGCCAAACTGGCGCGCGAGGCGGAGATCGCCTATGCGATGCTGGCGATGGTGACCGATTACGACTGCTGGCATCCCGGGCACGATGCCGTGACCGTCGAAATGGTCGTGCAGGTGCTGCGCGCCAATGCGCGCCTGGCGCAGGACGTGGTGCAGCGCGTGATCCCCCTGATCGGCGATGGCTTCGATAGCCCGGCGCACCGCGCGCTGGCGACCGCGATCATTACCGACCCCGCCGTTGTGCCGCCCGAAAAACTGGCGCAGGTTGAGCTGCTGGTCGGGCAGTATATGCGCAGGGATGCGTAGTTTTCTTCTGCGATATCGATGATTCTAACCGGGAATCGCTCCCTTTCTGGCGCCAGCGCCCTCTTGCCAGCGGACGCACACGGTGCCAACAGGCGCAACCGGGGGCATCTGTCCGGCGAGTCTGGGACGCGGCGTGCGAATTATCGCCCTGCCTGCTCCGCACAGGTCGGTCCATCGTCGGGAATGCCGTACTGCGCACGCTCCTCGGGGTGAAGTCACGCTGCAGGCGAGAACAGAGATCGGCGACCGTATCGGCGATCTCGACGTCCCACAGGCGTGCGGCGCCATCGGTGCTGGTGGTGAGCACGCGCTTGTCATCGGGGATGAAGGCGATCGCCCCCGCGAGGCCAATCGTTCCCGTATGGCCAACAAACCGCCGCACCTCCTGCCCGGTCGCCGGATCCCACAGCTCAGGCACGCGGTTGATGGAGATTGAGAATTTATTCCGCTATACCGCGCTAGCCGTGGGGCTGAAGCCCTCGGCTAACCAGGGCAAAGCCCGCCTGCGCGGGCTATACCGGATTATTTATTCAAAGACCATAAACCGCGCCTGAGCGGACGCTTCGCGCCGGGCGACCGCCTAGGCGGTCGCCGTGGCAGCGTCCACGCAGGTGGACGCCCGGCGAAAAGCCTTCCAGAGGCGATTTCAATCGCTGAACGCCAGGCAGCCTGAGCTCAGGCATGCGGTTGAAGCCGCGCCTGAGCGGACGCTTCGCGCCGGGCGACCGCCTAGGCGGTCGCCGTGGTGGCGTCCACGCAGGTGGACGCCCGGCGAAAAGCCTTCCAGAGGCGATTTCAATCGCTGAACGCCAGGCAGCCTGAGCTCAGGCATGCGGTTGAAACCGCTAGGAGGACGCTTCGCGCCGGGCGACCGCCTAGGCGGTCGCCGTGGCAGCGTCCACGCAGGTGGACGCCCGGCGAAAAGCCTTCCAGAGGCGATTGCAAGCGCTGAACTGAGGTAACTGCTCAGGCATGCGGTTGAAACCGCGCCTGAGCGGACGCTTCGCGCCGGGCGACCGCCTAGGCGGTCGCCGTGGTGGCGTCCACGCAGGTGGACGCCCGGCGAAAAGCCTTCCAGAGGCGATTTCAATCGCTGAACTGAGGTAACCGCTCAGGCATGCGGTTGAAACCGCGCCTGAGCGGACGCTTCGCGCCGGGCGACCGCCTATGCGGTCGCCGTGGCAGCGTCCACGCAGGTGGACGCCCGGCGAAAAGCCTTCCAGAGGCGATTTCAATCGCTGAACTGAGGTAACTGCTCAGGCATGCGGTTGAAACCGCGCCTGAGCGGACGCTTCGCGCCGGGCGACCGCCTATGCGGTCGCCGTGGCAGCGTCCACGCAGGTGGACGCCCGGCGAAAAGCCTTCCAGAGGCGATTTCAATCGCTGAACTGAGGTAACTGCTCAGGCATGCGGTTGAAACCGCGCCTGAGCGGACGCTTCGCGCCAGGCGACCGCCTATGAGGTCGCTGTGGCAGCGTCCACGCAGGTGGACGCCCGGCTAAAAGCTTTCCAGAGGCGATTTCAATCGCTGAACGCCAGGCAGCCTGAGTAGTTACCTGCTGAGGACATAACGTCCATAACACGTCTGCAAGCGCCGCCACCGGGAGGTCGGGAACGCGGTAGAACATCGGGACGTTGGTGATGAACTTTGATAGCACTGCTCACGCAGCCCGGCGTTGCAGGTCATAGGGCTGGATCAAGACCTCAGCCGGCGCCCCTAAGCCCTGGTGTAACTTCCGAATCATCTCAAGCGTAACATGATCCCGCAATGGGATCAAGAAGCCGCGCCCTTAATCGTTCTACAGTGGCATTGCAAGTACACGCAAGGCATATGTTTCACCACCGACCCACTCGTCATCGGGTTCGCCAGGAACCACCGGCTCGAAGCGCAGGAGCGATGCGGAGACAAAGCATCGAGTCCGGGCGGTTGATCGCATCCCAGAATTGTTCAGCCGCACCATCGAATGTGGTTGAAATCCGTACCAGCGTGAATCATTCCTGTGCTGATGGTTGCGCCATCCGCCAGCCCGCTCAACGTGCAGTGCGAACCAGATCCATCATGAAGAAAAATGGCCGTGCCGGGGCAATCACGTTCAGGGTTCCGGTGATATAGAGCGACCGCGACGGGCAGGCGAAGGCGAAGGACCCGGTCGAGCCGGAATGGCCGACGAATTCAGGGAGCGGGGTAATCCAGAAGTAACGCGGCAATTGATAGTACATCAACCCGTAGCCGTAGCGTAGCGGAAAGAACAGCGCATTCCACTGCGTCATTCGCTGCAGGAGGGTCTGGTCGAACAGGCGCCCCTCGAAAAAGGCGCGCAGGAACGTCATACATTCAGCAGCAGTCGAAACCAGGCCGCCGTCCGACACGTTGGAAGAAAGGTATTTGGTGACATTGACCGGGGCGTTGTTCAGATACAGCGTTGCGGGTGGCTTACCGGGGCGAGGCTTTGTCCAATCGTAGAGGTAGGTGTGCTGCAAGCCAAGTGGTGCGCAGATGCGCTCCTCGAAATTGACCGTCATCGGCTTTCCAGTAAGGGCTTCGATAATCTCGCCAAGCAGGCGATAGTTGAGATTGGAGTAATAGGCTTTGCCGGGTGTTCCTGGCGGGAAATGAGGCGCCAGTCGGCGGGTGATCGTGAGCGCTTCGGCAGTGTCGATAGCGCGATCGTGACCGGCTATCAATTCCTCGAGGACACTTTTTCCGCCGCGGGGTTTATCTGTCTCGAAATCGGCCAGGCCGGACGTCTGGTTGACCAGCTGGAACACCTTGATCTGGCGACTGTAATCGGCACCTTTGTAGTTGTGAATGCCATCCAGCAGATCAGCTGGCAGATAGTCTGAAACTGGCGCGGCGAGGTCGAGGCGTTGTTGCTCGTAAAGTTGCATGATAATCGCGGCAGTATACATTTTGGTGATGCTGGCGATGAAGTAGGGCGTGTCAGGCTGCATCATCGCGCCGCTACCGGGGTCGGCCACCCCTGCCGCGCCGACGAAATCCAGGCGTCGGTCGAAAGACTGCACCGCAGCGACGATGTTGTGCAGTCCGCCTTTGCCAACCTGTGCCGTCAGCAGGGATTGAAGTTTTCTGGTTTTGTCGGTCATGGTTTTTCCTTACTCGTTGCCATCGACATCATGGGAACAACGCCAGCATGGTCGGCGCGAGGGAACCGCTCAGGGCCAGGATTTCGCTCAGACTATGTGAAATCGCCGTCCACCTGGCTGAACCGGTGCGCCAGGCGATGTAACCATAGGGCAGAGCCAGGAAGAACGTCGAAAGAACGAAGCCGAACATGTTTTCGGCGGGAAAAATCATCTGCGGAGCGACATGCCAGAGGGCAAACCCGACCGCAGGGTACAGAATTGCCAGCCAGGGATTGTGCGGAAAACAACGCACGTACAATCCGCGCCAGAGAATCTCTTCACAGCAGCCGTTCAGGGTTGCCAGCGGTACGGCGATCAGAATCAGGATCGGCGGGGCGCGGACGAACTCCCCGGTGTACATGAAAACGGCAACCAGTGTGACCGTTAGCCAGAGCAGTGCCGCAGGCCAGTTCGCCCGGCTGAACAGGGGAGCGCGGTCATGCAATATCGTGGCAAATTCCGCTTTGCCCAACAGAATGCGGGGTATCATCAGGCACCAAAGCAGCCAGTAGAAGCCGAAGCCAAGCAGATAACCCGCCTGATCGCCGAGCCAGTGGGCAAATAAAGTGAAAATTCCGACCATGACTGGCAGGATCAGGAAGGGTAATCCGAACAGCAAGGAGGCACTGGAAATCTGACGTCTCATATTCAAGGTTTTATTTTTGCAATGCGTGGAAGATTTCCATGGCACGGTTGACGCGGCGGGTCATGCTTTGGATATCGGCGGTCTTGAAATTGGGATCTATCTCGGCGAACGTAAACATATCCCCGGCGGCATGGATCGTATACATTTCAGTCTGACCGAAAAAACGCGCCAGCGAATCATCCATAAACACGCGCAACCCTTCCGGGTCTTGCGAGGTAACGACATATCGCTCACCCAACGCCGGGTATTGGGGAAATGCCACCGGTTCGCCGATTTTCGACATGCCCCATTCCACAACCTGATTGGCCAATCCGCTCAGGGCGTATTTTGGGTTAGATTTCGGAAAGAGCGCAAACGGCGGTAATTTCAGCGATGGGGAAATGATTGCCACTGCCTGTCGCTCGACCCAACTGTCATCATTTCCGGATCTATCCACCAGATCGAACAGGAACATTGTTCCATCCGGGATGAGACGCCGGGAAACATGTCGCAACTGATAATTGTTTTTCGACCCTGGTCGCTGGTACAGGCTGGATATTTTCCCGGCAAGAGATCTATCTGCCTCGAATGAGGAGAAACCCAGGCTTTGGGTAAGCAGTTGTTTAGTTTCCTTCTCCTTACGGCTCGATTGAGTAAATGTGTAAAGAAACCAGCCAAATACGACTATGAAACCGATCAGGAAGAGGATAGCAGTAAGATCCATTGTAGAAACTCCTTCGTTTTGGGGTGAACATCAGTGCTCGATGGTTGCGCGGGGCGAGCGGCTTGCCGTGGTTTCCCAAGCGTGTTCGTGGTGTATGCTCAGGAGATCGCACGATCCGATAACTCGACAGGTTCGTCGGCGGCCTTAGCGGATGTGGTGACCATGGAGACGCCTCCCTGGATAACGATCTGGCGAACGCAGCCTGAGTGTAACGTGTCCTCCTTAAGAGCAGTTTAAGGATGGCCGACTTCTGCTGATGGCCCTCTGGCTGGTCAGTTTCGATATTTGGAGGAAAAACCGGCTCGGATACCATTACAGTCTCTGTTTGCGATGCCACGCGCCGAGAAGTCTCGGCGCGTCGCCAGGGTCAACCGTCCCCAACCAACGGTGAGAGACAGGCCAGGTGCGAAACACGCGCATCAGGCGGGTTCCTCAACTGAAGGAAAAGTCTGTGAAGAGATAGCGGCGGTAATCTGCCACAACATAGCGCCTGCCTTTGCGGGCGATGGTGAAGCCTTCTTGTTCCAGCAGCGCCCTGTGCGCCTCCGCGCCGCCGGGGAATTTCTCGTTCAAGAAGCCGTCAGCCTTCAGGGTGCGCCAGTACGGGATGTCCAGCTCCGGCGGCGCGCCGCCCGCCTCGACGGCGGCGTTAGCAGCCGTCATGATAACGATGCCGGTGGTCAGCGTGCAGCAGCCCCTGACCTGGTAGTGCCGGGCAAGGGCCTGACAGATTTCGATGATCGTGGTGAGATGGCCGTAAGGCATCTGCCGCATCAACGCCACCACCTCGCCAGAGTTCACCAGCACAACCGGGTCGCCGGCCTCCACGCCTATGCTGTGCAGGGCGTTGTAGCAGGGAAATCGTTCTTCCAGGGGCAGAATCTTCGGCAGACCTTCCTTGTCCGCCATCTTCTCCTGCCAGGTTTTACGTCTTGATGCCATGTGAGTGGTCATTCACGGCGTTCAGCCAGGACATATGCACACCTCCAGATCAAAGACCAGCACAATCAGCGCAAAAGTCCAGACGATGGGGCTCCAGGGTCGGCCCACGGCAATCCCGCCAAGGACAAAGGTGATGCCCACTGAGATGGCCACGATGAGGTTGCCCCACAGCCCCGCCGCCTTGAGCCGCCAGTTGTACAGGAAGCCAAGCAGCCAGATGATCAGGCTGAGCCCGAGGGCCAGCGGACTGAAGGTCGCGGCGGCGACAAGCCCGAGCAGCGCCGTGACCAGACCGAGCGTCATCACCTCGGCCGGGGTGAGGACACCGGCGGGCAAGGGACGGTGTGGCGCGTTAATCCGATCTACTTCCAGGTCAAAGTAGTCATTGGTGATCAGCGCCGAGCCGGACAGCAAGAAGCCGCAGGCAAAGCCAGTCCCAAGGACGGGCAACGGGGGAACAGCGCCCAGTGCCAGCACCTCCCCAAGCAGGACGCACACGCCTGCCGCGATAGGCAACTCGGGACGGAAGATCTGGATCACGCCCCGGGCTTTCCTGGCGATGCTGACTGGCGGTTGCATAGAAAGGTAAAAGGTAAAAGGGTTTATGACGGTCGCTGCCTGACTGAAACGATGATCGTGTCAGGCACGCGCATGATCTCCGGCAGTTACAACAGATTCGTCACCAGAGACAAATAGCAGGGTCGCCATCTTCACTGGCAGGGTATCGATGATGAAGCGCGAGATGTTCAGTTGCGTGCGGTTCATGGCGAACTCTGAGTCATATGCGCGCATCCATCAACTGCTTCAACAATTGCGAAGGTGTTGGTGGAGGGTCTGAGCGTGGTGAACGATCACGAAATATGTGCTCAAACAGGGGTATGCTCCGCAGTACCAAGTATATGCCGCAAAGATGCCTGCGGGAGAGAAGAGATCGTTACGCTGGGGGAAGATTATTGTGCTCTCTACCCTTAACAATGTTCTAACGAACAAGTCTTTACGTACCACTCATGATCGGTTACAATATACTCCACAAGGGGATGACTGGTCTCGACAGGGAAGGATGTCTCAGGTTGCAAGCCGAGCCGCCCAGTCTCGTTAAAGGGGCAACGGCATAACTGCCAACACCAACAAAGTCGTCGCCTTCAAGCCGGCGATGGCTCTGGCTGCCTAAACAAACAGCAGCCCGCTCCCTTGCTCTCACCCCGATGGAGTAAGTTCGAGCGTCAGCAAGTCGGGGCGCTCCCGGCGAATGCCTGCGGCGTCGGGCTAAGATCAGCAGGATGGCTCAAAGGTCGCTCTGTTCATCGTGCGACCGCGAGCGACAGCAAACGATGAACTAAGCTTGTAGACGCCTGAGTCTAACTTTTCTGGACGGGGGTTCGACTCCCCCCATCTCCACCAACCGCAACGCCCGGAGGTTCCTCCGGGCGTTTTGTATTTCGTTGAAAGCAAGCGGTGAGGAGGGCTGGAGCGGTGCGTCATCGTTGCGACCAATACCTTGTAGTACATTGACAAGTGGTTTACAGCATTGCTTTGATGCATCGGCGCGCCATTAGTTTGCAACTGACCGGTGTCGACTCTGATCAGTCAATCGGGCAGGCAAGATCTTACACCCCTGTCACCCCAGACAAGTTGAGTAATTAGCCAGAAGAGAATAACGTGAAACTCTTTACATCAAGCGTGTGTTGAAGTATACTTTTTCTTGACAGTAGACCGCGTGCCAGAGTCGAAGGGTGCATACTACTTCGCGGTCTGGAAGTACCCCCCCTTGCTAATTCTAACCCGTCTATGCGGTTACTGCTGGACGGTTGGCAGTGGAGTGAGAGGTGGTGTGCGTTGGAGAGAACTATCCGCCTTCCAGAGCATATCCTGGAAGCGGCGAACTAATAGCCGATGAATACTGTACAGTGCAGGAAGATGCGAACAATGATTTGTCTTACGTGGCGCAAGCAGTAAAAGAGGTGATCTGTTTACTTTCTTCAGATTGAAAGTCAGACATTGCCAAAGCATAAGTACGATGCTCTCGCAGATAATCCAACGTCAGATTCCAATAGGTAGCACTGTTATCTTTTCCCTGAAGGATGGGCAAGATGTAAGCGGAATCCTGGTAGAAATCGGACGCGACCACGTCACCCTGGAAAATGCCGGATATTCGGTGACCATCCTGCTAGAAATGATCGGTACCTGGCGCGTTTCCAGGAGCCTAGAGCCACTGGAGCACACACCGATGCCAGAGCCGTCATCCGCTTCTCCACCTCCATTATCACCTCCAGACCTTGCCGATCAGGAAACCATCAAGAGACTCCTGGAAATTGAAGCACGCTTTCAGGTCAGGCAACAGGTTTCTTTCATTCAGATAAAGGTGCCAGATTTTGTTTTTCCGGCGAATGAGATGCAGGGTAAGCAAAGCGCTAATGCACTGACAATCTGGAATCGCGTTAAGAACAAGTACGAATACGCAGAAAAAATAAATGAACTGAGCGCTAAATTTGGTAGAATACAGTCTTTAGTAGGAGAGCTTGCTTCTCTATCAGAGCAATTTCCGCGTTCTTCTTCCGTGAAGCGGCACCTTGCGTATTTTTATCACCTTGCGGGCGATAACCAAAAGTCTCTGGCTTTGTATCAGGAATCAGCTTCCATTTCAAATAATGCCCTGGATTGGTATAACCTGGCAGCGAAGGCATTAGCAAAGGGCGATGAAGCGCTGGCTTGTTACTGTTTTGGGAATTTCTTCAAAGTGAATCCCATCACAGATGAATTGGACACCTGGTATATCTACGCTGGCCTGATCAGGAAATTCTCCGACTATCAAACAATTAAAGAGATAGCCAGAAAAAGAGTAAAGATTGCATCGAAGGACGAGATTGTTTTGCTATTGGAGACAGGGATCTACCTCTTAACTGCCACTGGACGCGGACAGATCGCCACGAATACTGTCCAACGCTGGATAAAAGACCATGCTCTCGAAGATTTAGTGATCGAGGTTTTTGACCATTTTCAAGAGCAAAAGGATGCAGCATACCATGAAAGAGTATCAGGTTTTTTAGAGGAAAAATCACCTGAATCTGTCCAAATGAGTCTCGATAATCCACAAGGTTTTATTTTCTCATACAGGAGGGACCGTAACTTTGGTTTTCTCGAAGGTAAAGATGGAAGAAATTACTTTTTCCATATCACTGCTGTATCTGATGACGACTTGCTTGCACAACTTCGTGATTTCACATCTGGCAAAAGGATACCGGTGATCTTCGAATCAAGTGAGGGACAGAAGGGTCCTATCGCGGTAAGGGTTGCGCTGTACCGTACTCTTGAAGAGATGTTTGCAAAGGCTGTTGAGTATGCCAATGATGGTGACTATTCGAAAGCGATTGCTTTTGTAAAGAAGGTACTGGATGCCAGACCCAATTTTCCATCTGCACAGGATTCCTATGAAAAGTGGCGTGAGTATGCCAGAGTTAGTGGTATTCCCAAAGGCTCAAATCCCTATGCGCGAGCCAAGCGTGTTCAACTAGTTGAGAAAGATCTTGAGCGAGCAGCCCAGCTGCTTCGTGATGCCATCAGGCAAGGCGATAATGTCGAAAGTGCTGTCAAAGACCTGGCAGCATTGCTGGTTCAACTGGGGAGACCAGATGAAGCCATTCAAGTGCTGGAAAAAAACAGGAGTCGTATTTCCAACCAGCAGTCTGTGGATAATATGCTGATCAACTTTTATCAAAATGCTGGTCAACACGATAAAGCGATTTCACTACTTCACAAGCAGCTCCAGCAAGCCAACACAGAAACCAAAAAAGCACAGATTCTATGGCAGATTGCAATAGGATACCTCAGAAAAGAAGACTATGTTCGAGCCGAGCAGACTTTCCAGGAATTGCGACGAGCGCAGCCTGACAACAAGTCCATACAAAGAAATATCGCTCTCTGTCTTTTTAAACAAGAACGTTATGAAGAGGCACGGAAAATACTGGATGGTATTTTATTAACTACACCTGACCCCCAAGCGGCAGAGTTGCTGGAAGCAATTAGACAAGCACAGGTTGGTCAGGTGATTTCTATAAATGAAATAATTGTTGAGACAGCATTATCAGACATTCCTAGAGAAATTAGCGGATTTGCCAGGTTTTACCTGGATCGCTGTGATTATCAGGGGGTTCGAGCGGATCACATCCAGACAAAGAGTTTTGATCGCAGTGATATTTCGACTCTAGAACAGTTAGCTACACGTTCTCGAACTATTCGTCCGCGCGAACGCGCTAGTTATTACCTATCTGCAGCCAAAATAACTTCTTTGCTAGAAGATGAGGATCCGAATCAGTTTTATAAGTATCTTTGTCGTAGTTTCGCTTCGTCTGGCGACGCGATCGTTGTTGAAAACAGGCCATTAGATGCAGCGCGAGAGTATTACTGTGAAGCGCTAAGTGTATATGACGGAGATCGAAGCCGAAGCAGAGATGAACAGGATGCAGTCAATGCCTTGGTCAGATTTTTGTTTTCAACAATGGGACAATCACAAATCCCTATTAAACCAAGTATCCCCACTATTGATGAAACTCTGGAATTTGTTCTAACACGTCATCCTGATCGCAATAAAGCCTTCGATGCAATTGCCTATCTCGTTTTTCGTAGCCGGTACGCGGCTAATCGTTTGCTCAACCGAATCTACGACAAGTCGTCTCTACAAGCAATGGCATTAGAGTATTTGAAGTCGGCAGGTGTATCTATCGGTATAGTAAAGCGCTTTGATGACTTTTTCAGGCTGTGGAACGGTTTGGTCAGGAAAATACTAGACGAAAACCGCTCTCTATTGAACGAATTTCGTATACTGAATCGAGTTGAACTTACTACTGCCTCCCTCGAACATGGAGTGGAAAGAATAAAGAAAATTACTGGAAGGTTATTCTTCGAACTCGATCGGCAAAGAGTGATACAAATTCAAAAGGTATTGGAAACTGCTCTTGAGTTGTGTAATCAGAACGCTTTTGAAGAAAAGGAGCGACTTTGTATTCAAATTGAGAATCGTTGCCAGGACCTGCTCAACGAGATTGAGATAAGCCCCACAAAGATTTCAGTAGAGGACATGTACCCTCTTGTTAAAGGCATTCAGAGCAAGATAAACGCCTATTTGACACAACTATATGAAACATCAACACCACAGTTAACCATACGATTGCCTCTTGAAACTTACATGCCCGGAAATAACCGATTAATAGAGGCACAGGTTGGGATTAGCAACCGAGTGGGATGTAGCCCGGCCGAGGCAGTAGAACTGGTTATTCAGCAGTATGAAGAGACCTCTGCTATTAGGTTAGAAGGGTCTTTACGCGGTGGCGAACAGCGCATATTGAAAGTCCCTGTTCAACTCAGTGAAGAAGCTCTGTCCGCTCAGGCATTTTCGCTGCCCATCTACGCTCGTTACCGTACACGGTCAGGAGAAACTCAGCAGACGCCAGTTAACAACTTCTCGATTCGATTGAGCGCAGAATTTGAAGAAATCGAGAACCCCTATACCCCATATGCAGAGGGTGGTATTGTGGGTGAGTCTGCGATGTTTTATGGGCGTGATGAACTAATCGCCAATGTGTCAAATGCATTGGATACATCCAGGGCGCAGAGCAAGTGCGTTGTGATATATGGTCAAAAGCGCGCCGGCAAGTCATCTATTCTTTATCATTTGCAGGAAAAGTTAAAATTAAAGGAAGATCTGCTCGTTGTGAATATAGGTAATATCGGGGGAATTCTCGATGAATTCTCGCGTATTCCCTTCTTGTATCATATTCTTTGGACTATTCTAAGTAAACTAAGGGATTCTCTTGAAGATAAGCTGAGTGAGGGTAGAAGCTCGCCGGATGTATCGTTTCCTTCTGGTATGGAGTTTTATCAACATCAAAGTCCCCTATTGTTGTTTAGGGAGACTTTTGACCGTTTCCATCGATCGATTGAAAAACTTCCTGACTGGCGGGGTACGCGGGTTATTCTTTTGATAGATGAGTTCTCGTACATTTATGGATATATCTTGAAGGGTATGATCCCAGAAACGTTCATGAAAAACTGGAAGGCAATGTTGCAAGACAACTTCTTTAACGCCGTTCTGGTCGGACAGGACGTCATGCCTAAGTTTAAGCAACGTTTTCCGAATGAATTTGGGACAACTCAGGACGAGAGAGTGACCTATCTCAGGCGAGAGGACGCTATCAGACTGATTGATGAACCAATTAGGATTGGTGGGCGCCATGGAGAGAGTCGTTATCGTGAAAGAGCCATTGAGCGAATCTTGGAGTTAACCGCAGGAAGCCCTTTTTATATCCAGATATTATGCAATCGTCTCGTTGAGTATATGAACCGCAAGCGTGCCAGTCTTGTGACAGAAGCTGATGTCGAACAGGTAAAAGATGAACTGATAAGAGGTGTAAATGCTCTCGGTAAAGATAAGTTCGATAATTTGATCAATTCGGGTGATACATCACAAGATGCAATCAGCGATGAAGATGCGTTAAAGGTGCTTACTGCGATTGCCGAGAACAGTCGCACCGGTCCCTGCAGTCGCAGCAGTATTGCCTGTGAGACCAGTATACCCGTCGACGAGATTCTTGAAGACCTTGTCAGGCGTGATGTGATAGAACGTGAGCGGGGTCACTACTACTCCATTCGTGTCGGATTGTTCAGAGAATGGCTGCTTGCTCATAGTTGAGGCGGCAATGTCGGAACGCGATTTTATAAATCCATTCAGTGACTATGGACATATAGTACACGGCGATCGTTTTATTGATCGTTGTAGTAGTATTCGCGCCGTCGAGAACCGCGTCATTCGTCCTAAAGAACCGGGTAATCTGGCAATCATTGGTGATTACCGGATCGGTAAAAGTAGCCTGGCATATCAGTCTATTATGGAGCGTAAGAATGATCTTCTGAAAGAAAGACGACTCCCTGTTTGGATCAACCTGGCAACTTTTGATCAACCATCTCTATTCTTTCGTGCGCTTGTTACCAGTAGTTATGATGAATTGGATAATCTGGGATGGCTTTCTAATGATATCAAGAACGCTGCTGCCCGTGCGCTTCAGGATGAAGTCTCCTGGAGCGAAGGGTATGGGCGGATTCAGCGCTACTTTGAGAAAGTACGTCGCTCTGGCATACGTATTTTGTTTATTCTTGATGAGTTTGATCATGCACGTAAACTATTCAAAGGAGATGTTTCAGGATTTCAAGGATTGCGTGAACTGTCTTATCGACCTGAATGGCGCGTGACTTTCGTTACGACATCTCGAAGGTCGTTGCAAAGTATTGAGTTACAGACTGCGGCCATCTCAACCCTCGATCACACTTTTCATAAACATTACCTGGGTATGTTTGATGAAGATGCACTTGAGGAGTATTTCAAGCGATTATCATCGATAGGCATTACAATAACACCGCAAGTCAGAGAGAGGCTTTTTTTCTACTGTGATGGACATCCTTACCTGCTCGAAATGCTAGGTTATGAAGTAGTGGAGCTGTTTCGTGAAACAGGCATTGTTGATGTAGATCAGGCGACTAAGGATGTTGGGCAATCTTTTATTGATCATTACGAGCATACATTGGAAGTGCTCAAGGAAGATGAAAAACTTAACAAGATGTTGCAGATTCTGTTTGGTCCTGTGATTGATGCGAAACTAACTGATGCTGAAGAGTTGCAAAGGTATGGTCTTATAAAGCTCAACGATGAGGATGTTTATGTCGCTTTTTCGGAGCATTTCCAGACATATCTGAGGATAATAGAGCGCTATGTTGATTTGTGGCCCCTATGGCGGGAGACAGAGATGGCGTTACGACGTGTTATTACGGAAAAGATGATAGAGCATTACGGCGAGCAGTGGATTGAGAGGTTGTGCAAGGAGAAGCCTAAGATAAGGACAATATTTGAGAAGAGTGAAGAGGCGCAAAAGCAAGAGGAAAGATCTTTCGGCGATAGGGCATCTCGCAATCTAGTTGATTTTATGTACCCAAGAGGCTTGTTTGATATCATATTTGCGGAATGGTCGGTTTTCAGGGATGTTTTCGGTAAAGACAAAAACTACTGGGATCAGCGTGCTCAGTTATTGTCAAAAGTGCGAAATCCTCTGGCTCACAATCGAGATATGGCACTCTATGACTATGAGCGTCGGATAGCAGAAGGATATTGCGGAGAAATACTCACAGCGCTAGAAAAATATCGATCGGCAAGTAATGCGTGATTTTGTCAGCCTACGCGGGTATTTTGTGCTTACAGGAAATTGCGGCACAGTCGACTGCAGAATCGTGCAGCGAGCGCACATGCGGGAGGGACGTTCGTGCATCCAGCCCGGTGGAACACCAGCATCGTGCACACTGAGTGTGCACGTGGGTATACAGGATGCCCACGTATCCTGCGCATGCGTGGTTCAATAATGCTGAGCTTTGCTCTATCATGCCTCCTCCCCCCGCTTCGTTTCGCGTGGCGCGCCGCTGCTTAGCGGCGCAACCTCGATCGGAATATCGGTGTCGCGGAGCAGCCGGGTGACGATGTCGCCGCTGATCCAGTGCCGCCAGGTGCGTGGGCGCGGTTTGCCGACGATGATGCGCTGTACGCCATGCTCGTGGGCATAGCGGAGGATCGAGTCGACGACACGGTGACTATCGATGACGGTGACGTGCGCTCCCAGGTCGCGCGCCAGGCGCAGGTTACGCTCCAGTTGCTGCGCAGCGCGCGCCGGACGTCGTGTGGCAGCCCCCGGCGGCTCAACATGCAGTGCCAGCAATTCGGCGCCAAGTTCTACCCCTACGCGCGCTGCGTACCGGATAACCGCCTGCGATTGCGCTTCTTCGCTGATGCACACCAGAATGCGCACCGGCGCGGAACGTTGATCGGTCACAGATCACACACCATGCTTCAAAATGCAAACTGCACCGCCTGATAGCGGCGTCGCCACCATTTGAAGATTTCGTCGGCAAACAGCATAATCACCGGGAAGCATGCCAGCATTACCCAATGCTCCGGTTGCGGCGGCACGAAGTTGAACAGCGTCGCCAGAGGTTCGATATAGACCAGCGCCAGCATCAAGACCACCGAGAGCAATGTTCCAACCACCAGCGCCCGGTTTGTGAACAGACCGATCCGGAAGACTGAACTCCGGCGCGTCCGGCTGGCGAATGCCACACCCACCTGCGCCATCACGATCGCCATGTAGGTCAGGGTTGTCGCCTGGGCATAGATCTCGCCGCTGCTCTCCATCGGCATGCCGGGTCGCCATCCGGCGCTCCAGTACACGGTGAAAAACGCCAGTAACGCCAGTGCGCCTTCCAGCATGCCGAGCATTGCAAATGTGCGCAGCAATGTCTCACGGTCAAGGAGCGGCGCGGTGCGTGGGCGGGGTGGTTGCTCCAGGATGCCCGGTTCGGGTGGTTCGGTGCTTAAGGCGACCGACGGCAGCAGTTCGGTGCCGACATCGATCGCCAGCACCTGGAGCACGGTCAGCGGCAGCGGGGCGCCGATAATGACGCTCACGACGATGACGGCGGCTTCGGCGACATTGTGCGCAAAAATGTAAGCGGCGAGTTTCTGGATATTGGCGAAAATGGCGCGTCCTTCTTCGATGGCCAGCAGCAGACCGGCAGGGTGTTGCGCGTTGAGCACAATATCAGCGGCAGCCAGGGCGACCGCCGTTCCCGACGCGCTGACAACCACGCCGATTTCCGCCTGTCGCAGTGCGGGTGCATCATTGATGCTGTCGCCTAAAAAAGCGACGATTTCGCCGCGTTGCTGCAGCGCTTCGACGATTCGCCGCTTGTGTGTTGCGTCCAGTTGCGCAAAAATGACATCTTCCAGCGGTGCGAGGATCAATCCGAGGTTGGCGCTGCTCATGGCATCGAGATCCGCACCGGTGACGATCTGGACGTGCGGCGCATCGATCAGCCCCACTCGCCGCGCAATTGCTTCAGCGGTCAGTCCATATGCGCCGGTCACGATGATGACGCGAATGCCAGCCTTGCGACATCCCTCGATCAGTTGCACCACTTCTGGTTGCGGCGGCTCCTGGAGCGTGGCAAATCCGAGAAAGGTGAGATCGTGTTCAATATCTCGCGCGCGCCACATGATCCCTTCGAGCGGCTCTTCGACGGAGCGTGTGGCAAAAGCGACGACCCGCTGACCCTTGCGGGCATACTCATCGATGGCGTCCTCGATCTCCTGCCTCATCGCGTCGTCCAGGTCGCGAACGACACCGTGATACTGGATGCGGACGCAGATTGAAAGCACGGCGCGACCTGTTCCGCGCACATACGCTGATAGTTCGCGTTTCCCATCGCGTTCGATGGCAACCACCACGCTGCCAAGTTGCCGGCGCGGTTCGTAAGGGAAACTCTGCAGACGAACGATGCGGTGACCGAGTGATGCTTCATCGATGCCACCGCGCGCCGCAGTCGCCAGCAGCGCCCCTTCCAGCGGATCACCGACGATGTACCAGTCGGGGTGGCTTGCGTCGGGCGGCATCAGACGCGAGTTGTTGCACAGTACCGCAGCGCGCAGAACTGCGGTCAGGTCGGGTTCGGATGCGACCCGTACCAGAGCGCGTTCGTACAGAAATGCGCCTTCTGGACGGTAGTCGCTGCCGGTTGTCGTGTAGACGCGCCCGCCAGCCCAGATAGCGCTGACCGTGAGGGTTGTGCTGGTCAACGTCTCGACGCGATCGGCGCACAGCACGGTCGCCGAACTCAAACTTTCGACGCCCGCCAGTCGTCGAACCAGCACCCCATACCGCGCCAGGCGGCGGCGCGCCAGCGCCAGCGCCAGGGTAACCGTCGGCAGCAATCCTTCCGGCACGAAGGCGACGATCATTCCAATAGCGAAGATGATGCCGGCTTGAATGGTGAATTGTTGCCCGAAAACGGTCAGCAGGAAGGCGCCAAGACCGGCGACAATCGCCACGCGAGTGATGGTGGCAGCCAGCGTGTTCAACGCCTGCCCCAGCGGGCTTGGCTCTGCGCGGAGCGCCGCCGTGCTTTCCGCGATAGTGCCGAGCAGAGTTTGCATGCCGGTATGAATGGCGACCAGGCTGCCCTGCCCCTCGAACACGACCGTTCCCGCCAGCAGAATGTTGGGTCGTTCCACCAGCGCCAGCGTCGGATCGGGCATCGCTCCGGCCACCTTGGTTACCGGCGCCGCGTTGCCGGTCAATGCCGTTTGCTTGACCCGCAACCCCTCGCTGGAGATCAGGTAGCCGTCGGCAACAACCACCGTTCCCGGCTTCAACGGCAGAATATCGCCGGGGACAACATCCGTCGTTGGAATCTGGCGTACCTGCCCGGCACGGCGCACATACGCGGTTGCGGGTAATAACTGGCGGAGTGCAGCGATAGCGCGTTCAGCCAGATATTCCTGCCATGCTGTGAAGATGCCGTTGAGGAGTGCAACCACGAGGATGACCCACCCGATCACGGGTGTGTCGCTGAGGAATGCCAGCAACCCGGCGATCAGCAGGATCAACGAGATCCAGTTGACGAACGAGGTCGCCAGACGGCGAAACGTGGAAACCGGCAGCGTGTCGGCAATCGCATTCGGACCGTAGCGTTCACGGCGTTTGCGCGCCTCCGCTTCGTCAATGCCATGGGGAGCGGTCTGCAACGCAGCGCAGACCTCAAGCGGCGACATTGCCGCAAGCTGATCCAGCGAGTGGTCCGACACGACGCTCCTCGCGCACAGATTACCGGTCTGCGTAGCGCCCTGAAATGCTGAGTTGCTCGCCAGACTCTGCACGCTGGCGGAGCATCGCCAGTACCTGTTCAACCTTCTCTGGCGTTGTCAGGTCGTGGTAATACTCCAGGTTTGCCTGCAACACCGGCGCATGATCACAGTCTGCCAGGCACTTGACCCGTTGCAGCGTGAACATGCCATCAGGCGTCGTCTGGTCAACGCCGATGCCGAGTTTTGCCTGGAGCGTGGCGATCAGGTCTTCAGCGCCGCAGAACGCACATGGCACATCATCACACACCTGGAGCACCCATTTGCCCACCGGTTGCTCGTACAGGAGCGAGTAGAACCCGGCGACCTCGAACACGTCAGTTGGCGGCATGTCAAGCAGTTCGGCCACTTCGCGCATGGCTGCTTCGGTCAGGTAGCCATATTCGTCCTGTGCGATGAAGAGCAATGGGAGCACTGCACTCGGCTTGTGCGGATAGCGCGCAATGATCGCTTCGATCTCGGCGCCGTGCTTTTCGATCAATGACATACTGAATCTCGTTTACGTTTATCGATCAACTTCTCCGAGTACCGGGTCGAGGGATGCAATCAGCGCCACCAGGTCGGCGACAAGATGACCGCGCGCCATGTGGGGCAGCGATTGCAGGTTGACGAACGAAGGCGCACGGAAGTGGACACGGTAGGGTTTGGCGCTGCCATCGCTGACGATGTAGGTTGCAAGTTCTCCACGCGGTGATTCAACTGCTGCCAGTGCGTCGCCGCGCGGCGGTTTGAATCCTTCCGTCCATAGTTTGAAATGGTGGATGAGCGCTTCCATGCTCTGCGTGATTTCGCTCTTCGGCGGCGGCGCGATTTTGCGATCCGACGTCATGTAGGGTCCGGGACCTATATCGCGCAGACGTTGCAACGCCTGGCGGCAGATAGAGACGCTTTCGCGCATCTCCGCCATCCGCACCAGGTAGCGGTCATAAATATCGCCGTGAGTGGCGGTCGGAATGGCGAACGAATAGGTTTCGTAGCCGCAGTACGGCATCGTTTTACGCAGGTCCCACGCTACTCCGGTGGCGCGCAAGCCCGGTCCGGTCAATCCCAGGGCAATCGCCGCTTCGCTGTCGATCGCGCCGATCCCCTGCGTGCGCTCGATCCACAGCGGATTGTCGGTCAACAGAGCTTCGTATTCATCGATCCGCCCCGGCATGATCTGCAGAAATGCCTCGACGGCTGCATCGAACCCGGCAGGCAGATCATACGCCAGCCCTCCAACCCGGAAGTAACTGGTCATCATACGTGCGCCTGAGACCAGTTCGAAAATATCGAGGATCTGTTCGCGTTCACGGAAACCGTAGAGGAAGACGCTCATCGCCGCCAGATCGAGCGCATGGGTGCCAAGCCATACCAGATGGCTGGCGATCCGTTGCAGTTCCACCAGCAGCACCCGTGCAACGGTAGCGCGCTCTGGAACTTCGCAACCGAGCAGTTTTTCGACTGCCAGCACATAACTCAGATTATTGGAGAGCGGCGCCAGATAATCGGTGCGGTCGGTCAGCACCACCGCTTTCTGGTACGTCTTGCTCTCCATCGTTTTTTCGATGCCGGTGTGCAGGAACCCGATGTCTGGCGCAACATCGACAACCGTTTCGCCATCCAGTTCAACGACCAGTCGCAGCACGCCGTGGGTGCTTGGGTGGTGGGGACCCATATTCAGCACCATGGTCTCTTTCTCTCCGGCAAGCGCCGGACGAGTGATCTGACTGGGTGCGGGAATGCTCAGATTGCGTGCGCGGATTTCGGCGACGGTCATAAAGGCTTACTCCTTCGCAAACGGTTTATGCGCATAGATTCGATCCTGGTTGAAGGTGAACGCCACCTCTTCGGCGCCGAGCGGCACATCTTTGCGCAGCGGATGCCCCTCCCAATCTTCCGGCATCAGAATGCGTTCCAGACAGGGATGACCGGTAAAAATGATACCAAACATATCAAACGTCTCGCGCTCGTGGTAGTTGGCGCCGGGCCAGAGTCCGGTCAGGGATGGAACGGAAGGGTTATGCTCATCGACGCCAACTTTCAGGCAGATGCGGCTACGATTGGTAAATGATATCAGATGATAGACAACCTCGAAACGCGGCTCACGACCGAGATAATCGACGCCGCACAGATTCTCGAGGAAATTGAACCGCAATTCCGGGTCGTCGCGCAGAAAACGTGCGACATCGACGATCCGTTCCGGGCGAACGTACACGCTCAGGTCGCCGCGAAACTCCGCCGATCCAAGGATTGCATCAGGCAATGCCGCACGCAATCGCTCCAGCACGGTTGCATTGTCGAGCGCCATGTTTGAACTCTCCTGGCACAGGCTCGGCAGTGATTCCGCTACGAGAGGCGAACCGGCTCGCGCAATTCGCCATCGAGACGCATGCGCTTCACCTTCTCGTGCAGATGGATAATGCCATCGATCAGCGCTTCGGGACGCGGCGGGCACCCGGCGACGTAGACATCGACCGGAACGATTTCATCGACACCCTGCACGATCGCGTAATTGTTGAACACCCCGCCGCACGCCGCACAATCTCCCATGGCGATCACCCATTTCGGGTCTGCCATCTGATCGTACAGGCGGCGCACGACCGGCGCCATTTTCCGCGAGACGCGCCCGGCGACGATCATGAGATCCGCCTGACGCGGTGATGCCCGGTTGATCTCCATCCCGAAACGCGACAGGTCGTAATTGGCGCCCTGCGCGCCCATCATCTCGATGGCGCAGCACGCCAGACCAAACAGCAGGGGCCACATCGCGCTCGATCGGCTCCAGTTGACCAGCTGTTCGAGCGATGCAGTGACGATTCCCATATCGCCCGCTTTTTGCTCTATTCCCATCGCAGTGCTCCTCGCCGCCACTCATAGATCAGTCCAATCACCAACACCACAAAGAACACCCCCATCGCCGCCAGCCCCGGAATGCCGAGTTGTCGATAGACCAGTGCATACGGGAACAGGAAGATGATCTCGATATCGAACAGAATGAACAGCATCGCCACCAGATTGAATTTTATCGGAAAACGACGCTGTGCGGGACCAATCGGCTCCATGCCCGACTCATAGGGCATCAATTTGCGCCGATTGGGGCGCTGCGGTCCCAGGTAGCGTGAGAGGACGATCACGAAGACCGCAATGAACATTGCGACCAGAAACAGCGTCAGAATGGGCAGATAGTCGATCAGCATCGATGGCGCCTTCGTCTGTATCGAATGGAGCAAACAAAGCGCGTGCCCGGGATGGCGGCGTCACCCGTGAAGCAGCGCCCGGATGCATGGCATTATACGCCCTTCCAGATTTGTGTCAAGATGCACAAAGTTGAATATGCGCCGCCTCGTGCGCCAGCAGCGCGCGTTTCCGTTCGATCCCCCAGCGATACCCGCCCAGGGCGCCATCGGCGCGCACGACTCGATGGCATGGCACGATCAGCGCCACCGGATTGCTGGCGCATGCTCGCGCCACGGCACGCACTGCATACGGACGTCCCAATCGTTGCGCCACTTCCTGATAGGTCTGTGTTGCGCCATATGGAATGGCGCGCAACGCCTCCCAGACCAGGCGCTGAAACGGGGTTGCCATCACGTCGAGCGGCAGGTCGAGGCGTTTCTGGACGCCGTTCAGGTAGCTGTGGATCGTGTCGGTCAAGTTGTTGCTCACATGCCCGGTATGCCGGATGATCGCGGTTCCGAACCTGCGCTCCAGGTCGTCCTGCAACATGTCCGGGTCATCACCGAGTGTCACAGCGCAGACCCCGTGCGCCGTCGCTGCGACGAGAAAGTATCCGAACCTGCAAGGTGCGATTGTTGCTGTGATTGTGCATGGATGATTCATGTCAGAGTCCTGGTCTGAACCGCAGCGCCAGCGCAGCGCCTGCCAGCAACAGCGCCGCTATCACCGTCCATGTGAGATGATCCGAACCGCCGGTGCGCGGCAGCGTCGCTGGTGCTGCCACGGTCGGCGTTGCGGCGATCCCGGCTGCTTCGGGAGTTGGTGTGGCTGTGGTCTCTACGGTTGGGGATGGCGTTTGGGTTGGTGTCGCCGGAACAGGCGTATCGCGCGGTTGCGGTTCCTCACGCGGAACCGGGCTTGGAGTTGGAGTGGATGTCGGGGTTGCTTCCGCCGGTCCGGGAATGATGCGGATGGGAACTTCCGCCTGGCGAGGCGCCTGGACTTCGTCGTCGAACTCGTCGCGCACGCCTGACGCTTCGGCGCGGTTGATGAATGCCGCCTCAACTGAGCGTAGCGCAGTGAAGACAGTCGTGACAGTAATGATTTCACCGGGTCGCAGTCGGGTCAGTCCAAGACCGGTCAAGACATTGTCCCATTCCAGCACGCCTTCTGTGATCGTCGCTGTCGATGTCAATGTTGGCGTTGGTATGGCGCTTGCGAATTGGAGGTAGGTCAGGTCGAACGTATCGCGCAGCGGAATGCGGGTCAGATCGGCAGCGCCATCGTTACTGATCGTGATCGTGAATGTGAGCGGGAGACCGCTGGCGGCAACCGTATCGGTCACGAGTTCTTTTCTCACAATCACCTGCCCGCCGATAGCATCGCCGGTGCTGCTTCGTTCGTCGCCGGCATATTCCTGCCCGCCAAACCCCACGGCGGCGCCGATGCGCGCCCGGTTCACGGTTGCGACCCGTGGCGCAATCGCGCGAAACACGGTGATGATTTCGATCGATTGCCCCGGATTGAGCGGACCAAAGACCGTATCGGTCGTCAGATCGCTCCAGGTGATCAATCCTCCGCCGGTTGCTGGCGTCACGATATTCGTCGACGAAAGCGGAATGGTGCGTTCGAGTTGCAGAATGCTCGACTCGTACTCATCGATCAGCGGCAGCGTGGTGATCGAGATCGTTCCGGTATTGGTGATTCGGATGGTGAAGGTCAACTCCTGTCCAACCTGAATGACATCCGAACCCTGCAGGCGTTTTGAGATCTCCATGCTCAATGTGCCGGTCTGCGCTGAAGGGGCGGCTGCCAGATTGGAGGGCACGGCGATGTAGCAGATCGCAACAGTTGCGACGGCAACGATCACTGCGGCAATGAACGGGCGCCATCCGGTTGATGTCGCAGGTGGTGGTGTCATGCACGCCTCCTGTGCTTGTCTGAGCCGTGTGCGCTACTCGCGCGGTCGAACCTGCCCGCCACGCCCCTTTTCGGTAGCCGGAGGATTGGTGATCGCTGCTCGTTCGCGTTCCTGCTGCGCTTCCCGGCGCGCCTCGGCATCCGCGATCAGGGCGACGGTTGCGCGGAATCCCCACACTGCCAGCAGCGCCGGCGCGATAAGGAGCAGTAAAAAGAATGGCGGCAGGGTTGCCAGAAACACAATAACGCTCATCAGCGCCTGCGTGACGATAGTGAAGAGCGGTCTGCCAAACGCCAGCACCAGTGCGTTCCGAAACGCAAGCAGCAGGCTCTGGCGTTCCTGCAACAACGCCAGTGGACCGAGATAGATCAACAGGCTGACCCACGCCGCCAGGAAATACGCGAACAGCATCATCAGGTAGATGCCGGGCGGCGCGTCTATCTGTGCATAGAAGACCACATTCACCAGGATGATGAGCAATCCCGCAAGCCAGGCGCCGTATATTTGCCATCCAAAGCGATAGTGCCGTCGTGCTCCTGCAATGAAGTCGCTCAGTGAAACGGTGCGCCCTTCGTGGATCCGTTGCGCGATCACCGTCAACCCGGCGCTCGCCATTCCCATTGGCAGGGTAGTCAACAGCAACAATGCCGCAGCGCCGAACGGCGCTCCACCAACCGCAAAGCCGGCTGCCAGGATCGGCAATGGAAGCGTGACCAGCAACCAGACCACGCTGATCAGCGTGAGTGGCAGCAGGTCCTCGAAGGTGTCGCGCGCTGATTGCCAGAAGACGCGAAATGGGTTCATATGTCCAGATAATTGCGCGAATACTTTCGATGTGGCACCATTGTATCAGGCTTTTGCACAGAACGATACACCCTTTCTCAACGGTCGCGGAGCAGGGCGTCGAGACGGCGAGCTGTTCGCAGGGTTCGCCATGGCGTTGGTGATGGTTCGAGCCAGGCGGCAAACGCTTCTTCCGATACGGTGCGCCGCGCCTGGATCGCGCGGCGTTCGCGCAAGAGTTGCGCCCGGTCGTGCAGCGCCTCGATGCGCCCGGCGATCATTGCTGGCTGACGGGCAAGTGCAGCGTATGCCAGCGCCAGGGTATCGTATGCCAGAATATCCGGCAGGCAGGAACGCAGAACACCCGAAGGAAAACAACGAATGATCGCGCGCAACCGGTTGCGTCCCAGCAATCGCTGCTTGAGCGGTGATCCCTGACCGCCGGTGGCGGAGTAGATGTGCCGCGCCCGCGCCGCAGGAACGACCAGGCATTCCCATCCGCGCAGTTGTGCGCGCCACGCCAGATCGACATCTTCCAGATAGTTGAAGAAATCCGGCGCCATCAAGCCGATGTCGTCGAGCATCGTCCGCCGGTAGAGCGCCAGCCCGCCGCTTGCCCCCATCACCGGTTGCGGTGCAGCGGGTAACGATCGCACGGCACGCCCCGTCCACAGATCGAGCGCCAGACCGTTGCGACAGGCGGTGATACCAGCAGAAGCCACCAGATCAGGGCGATGATCGAAGGTCAGCACGCCAGCAACCGCGCCAGAGCACGGGTGATCCCTCAGCGCCTCGACAAGCGCTGGCACGCATCCGGGTTCGACAAATGCGTCATTATTCAGCAGCAGAAGCAGATCACCACGCGCGGCGCGCAAGCCGGCGTTGACGCCGCCAGCGAACCCCAGATTTGCTGGCAGAGCCACGAGACGCACAGCGGACCAGGCATGCCGTAGCCACACGGCGGTGCCATCGATGGAACCGTTATCGACGACAATAATTTCATCGTCGGGGTGAAGTTGCGCCGTGACCGCGCGCAGGCAGGCATCCAGGAATCGTCTGCCGTTCCAGGTCACAATGATGACGGAGATCATGAGATGTCCACGATGCAACAAACCGGGTCATAAGAGCGTACAAGGTTATAGAATGTAGCGAAGCGGTTGAAGGAGAGAACAATGAACGTTGTGCATGATAACCGACGTTCAGTCGTGGTGGGTATTGGTCTGATCCTGTTGGGTTTCATCTGGTGGCTAAACCTGTGGTGGCTGTTGCCGCCGGGTGCATTGATTGCCGGTGGAGTGGCGGCATACATCCAGCGGCGCGCGCTACGAACCTCTGAAGCCGTCCAGGTTGGTTTGTGGGGTGTCGGGCTTGGGTTGCTGCTGCTGGTTGACTTTCTGTTCCCCGGCATCCTGTTCCTGGCTGGCGTCAGCCTCCTGATCCGCGGGCGCGAAGTCGGGATCGACGCGCAGATCCAGCACAGTATCAGCAGCTTGCGTCGTCCGCGCCAGAATACACCTCCGGCGTCGTCGACCAGCGTCCCGATCACCATTCACTCTGGCGCTGCGCCGCAAGCGCCTGTCACATCGCCCGATCACGCGGCTACCGGTGAAACGACACGCCTGCGCGAGTAATAGCAGCGTCCAGCGGTTCTACGAAACGACCCTGACGCCAGACGTCAGGGTCGTTTCCTATGGTGCACCCGGCACCGCGCTCAACGCCTGGATCCACGCACGCCAGTTGAGTTGAGGTGCAGGCGCAGGGAGCGGCGCTGGCGTCGGCGTCGCCTGGTTTGCAGGACGATCCTCGAAGGTTGGCAGAACAACCGTATCACCCTCAGCGGCGAGTCCAAGTTGCTCCCGCGCAATTTGTTCGGCATAGGCGGGGGACTCGGCATACTCCACCTGACTGAGCAGCGCGCGGTTTGTCGCCTCAATGCGGGCATTCTCGGCAAGCAACGCCTCACGCCGTTGCTCGAGTTGCGCGCCGGTCATGATCTGCCCGACGAAACTTGCCATCATCCACAGCGACAATACCACCATCGCCAGCGTGAGCGCGTGCACTCCGGCGCGCCCTGGATTCAGGCGTTCGCGCAATGTGAGGTTGCGTGACGCGGATACGTGTCGGCGACGGGGCATCAATCTCGACTCCAAAAAAGAAAGACACCAGTTACCGCAGAGCGCCGTGGATGAGGTTCTTGTGTCTGGGTACGCTCTGGCGATGACCAATCACGCCTTATGCTCATCGCGCCGGTCGGGACGTGGCGCTTCGAGGAGCAGCGGCTCATCGATATTGGTCGTCATCGAACTCTGACCACGGAACAGACCGCCTGGTTCGATGTGCAACGCAGATGTAGTAATATCACCCCAGACTTTGCCTGTCGGCGAAATTTCGAGTTGTTCAATCGCGGTGATTTCCCCCTTCACCGCGCCGGACACGTGAACGTTCTGCGCCTTGATCGTTGCAATCACCTGCCCTGTTTCGCCGATGATCAGATTTCCCAGAATCTCGATATCACCCTCGACTCTGCCATCGATCCTGATATTGCCATCAGATTTGAGGGTGCCGACAATGCTGGTGTTGGCGCCAATCACCGTCTCGGGCTTGCCGTTGAGATTCGCGGCGGGAAGAGCCTGAGACTGTTTTCTGTTGCCGAACATCGCTCCTCCTCTAACGGCGGTGTTGCTCGTTTGATGGCGCCGGGCGCTACGGATGACGCTCCCGGCGGCCAGTACCGCCAGAATGATCGCCAGAACGGCGACTGCGGCAATTATATAAGACGTTTGACCTTCGATCAACTTTTTGTCGCAGCGGAGTGTTCCGCTCCCTCCCCTACCGTCGGATCGTTCCATCCCAGTGTGCGCAGATATGCACGATCCGTCTCAGTCAACGCCGCGCGCGCCAGCAGGTCGGGACGGCGTTCCAGGGTGCGCCGCAATCGTTCACGCCGGCGCCACTGCGCAACCTCGCCGTGGTGACCGGAGACCAGCACCGGCGGCACTGCGCGCCCCTCCCATACCGCAGGGCGGGTGTACTGCGGATATTCCAGCAACCCGTCACTGAACGACTCATCGGCGATTGACTCAGCATCGATGACCCCCGGAACCAGGCGTGCAACCGCATCAATGATGACCATTGCCGCCAGTTCACCCCCCGTCAGCACATAGTCGCCGATCGAGATCTCGCGATCTATCAGCGCTTCGCGCACACGCTCGTCCACTCCTTCATAGCGCCCGCATACCAGCACCAGTCGCGGATAGGTCGCAAGTTCGGCGGCGATCCGTTGTGTGAACGGCTCACCATCGGGCGTCATCAGAATGACCGGCGGCTTCGGCGATTCTTCCGTCTCAGGCGCCATCGACAGCACCGCGCGGATGCATGCAGCGAGCGGTTCGGGTTTCATCACCATGCCCGCCCCGCCGCCGTATGGCGCATCATCGGTCGTCCGGTGACGATCAGTGGCATAGGCGCGAATGTCGTGCAGCACGACGTTGATGACCCCGGCTTGAATCGCCCGCTTGAGAATGCTCTCGTTGAGCGGACCGGCGAACATGCCCGGGAATAATGTCAGAACATCGAAGCGCATGCCTGCATTGTAGCACAGACCGGTTGCATTGCTGCACCTCCGGGGTGACAATCCGATCACGTATAATCTTGACAAAATAAATCAAATAATGCAACATATGGTCGGACCGGTTGCTTGAAACGTAAGGAGCAAGATCCATGACCCGCTTCGATGAATTTCTGAAGGCGAATGAAACATTTGCTGCCAGTTTCACCAAAGGTGATCTGCCAATGCCGCCGGCACGCAAGGTGGCTATTGTCGCCTGTATGGACGCTCGTCTGCATCCTGAGAAGGTATTGGGAATCGACATCGGCGATGCGCATGTCATTCGCAATGCTGGCGGACGCGCTCAGGACGCTCTCCGTTCGCTCGTTATTTCGCAGCGATTACTGGGCACACGCGAAATCGTCGTGCTCCACCATACCGACTGCGGTATGCTGACGTTCACCAACGAACAACTGGCGGCAAAGATTCAAGCTGATCTCGGCGTGGATGTGAAGGGACAGGATTTTCTGCCATTCGCCGATCTTGAACAGAGTGTGCGCGACGATGTCGCCTTCCTGCGCGACTCGCCGCTGATTCCGAAGGACATCCCGATCAGCGGCGCAATCTACGATGTGCGCACCGGCAGGGTGCATGCCGTCGTTCGCGCCTGAGACCGGCGTTCACCACACGACGACCTCCCGAAGTGAATGGAGATTGAAAATTAAATCCGCTATACTGCGCTAGCCGTGGGGCTGAAGCCCTCGGCTAAGCAAGGCGAAGCCCGCCTGCGCGGGCTATACCAGAATAATTACTCAAAGACCATATACTTCGGGAGGTCGTTGCGTTGGCGAGGATGACAGGCTGCAGGATCGAAAGCGGCACGACGGCGTAACAGGGGATGGTCTGTTTTGGAATAACTGTTCCGGTGAACGGGATCTACCGACTTTTCAGAAGTGCGAGGAGGCCGTTTCAACCCACACACGCTGAATGCCGATGAACTCTTGAGATGGCATGGTTTCCCCTTCAACCTCCAGACACAATTCGATCGCTTCTCGTATTCGTTTCATCAGGGTATCGAGCGATTTAGCCTGTGTATGACATCCGCGCAGTTCAGGGACGCTGGCGACGTAGTATCCTTCAGAGTCGCGTTCGATAATAACGTTAAAGGCGCGAGGCATTCTTCGTTTCCTTAGCGCGTGACGGTATTCAGTAGCAGGTGCTGCTCTCGAAAAACGTTGTGGATGCTACATCCGTAAGCAGTGTAAGAGGATAGCGACAGCGGTTATGCTGTATGCACGATGCTCATTTTCGCGCACTTCAATTATAAGATAATGAACGTCCCTGGTCAACTCGTCGCCCCTGCGCCTGCACGGTGCATACCATCATTCACGCACCAGCGTCCGCCACACGACGACCTCCCGCAGTATCACTTCGGGAGGTCGTTGTGTCGGCGAGGATGACAGGCGGCGGGGATCGAAAGCGGCATGATGGCGTAACAGGGGATGGTCTTCTCTGGAACGTCCGTTCTGGCGAATGGAATCTACCGACTGCTCAACAGTCGGCGCTCATCAGCGGTGGGCGGCAGAACGGCGTGCAGTGTTTTGATGGCTTTCTCCACTGCCTCGCGCTGGCAGTCCCACAACCTCTTCGCGCGAGAACACGTCGGGATCGAACGTATTCCGGGTGACGGGCAAGTCGTTAATAATGATGTTATCCGCCATCTTTTGCAGGTACATGCGGGTCGTTTTCTACGGTTGGCTCTCCAGAATCTCCTTAAGAATCGGCTTGACAGCGGGGATCCTCTCCTTGATCGTTCGCCACACAAGCTGGTAGTCCACGCCGAAAAAGCCGTGAATAAGCCGGTCTCTCATACCAGCCATCTCTCGCCAGGGGATCTCGGGATGTCTCCGGCGCAAATCATCGGGAATGAACCTGGCGGCTTCGCCAACGATCTCAAGTTGCCGCACGACAGCGCTCGTGGTTTTATCATCAGCAAGAAAATCGTCGAATGTCATACCGTGAACGAAGGTCTCGATGCGCTCCATGGCCTGAAGAACATCTTCCGTGTAGGCTCGATAGTTTCTCATATTCATATCGCTGTCATCTCTCTGAACACCTCTTCCCGAATTTCCTCGCGGAGGGAACGTTTAGAGCGTGATCAAAAACTAACATCTCGGATAGAGCCGATTCAGGAGCATTGCAATAGAACCAAGATAAAGAAAGGCTTCGCTTGATTCTGGATTGCGGTTGTTGCGGCGAATAATTATTCGCCGCTCCCAGCGATTGCGTCCCGCCCACGCAATCGAGCGTTCCACCACCCATCGCTTCGGGATGACGGCAAATCCCTTTTGTCCAGGCGGTTTTTCAATGACATTCAGGCGTATCGTCGTGTTCTGTTGCATCCATTCATTTAACCCTTGTTTGTATCCTTCATCCACCCGAATCTCTTGCATCCGAGGAAACGATTGATGATGCGCGGCCAAAAGCCACTCCGCGCCTTCGGTATCAGAGATGTCCGCCGGATGGACGAGCACGCGCAGCAAGAACCCTTTTGTATCAACCCAGCATTGCCGTTTGCGCCCATTGACCTTTTTTTCCCCATCGTAGCCGCGTTCTCCGCCTGCTTCGGTCGTTTTGACGGATTGGGAGTCCAGGACGCTGATGGACGGCTCCGGGTCACGATCCAACGCTTGTCGCGCCAGTTTCCGCAGCATATCATTCATTTTGACGAACGTTCCATCACGATTCCATTTGTCAAAATAGTACCGAACGGAGCTCATTGGCGGAACATCCGTCGGAAGCATGCGCCATTGACAGCCCGTGCGATGTTTGTACAGCAGGGCGTTGACGATCGCGCGGCGATCGATGTCGGTCGGACGCCCGCCGTTGGGCGACGGGGTGACGACGAGTGGCGCGATGGCGGCCCATTGCGCATCGGTCAGATCAGTTGCATCCTTGGTTGGATAGGATCGAAGCGCACGTCGTGGCATACGAGATTGCTCCTTATCAGAACGGCATGGTCGCCATCACGATACCACAAATCCGGTTTTCTGATCGCCCTCTGAAGGAGACCACTTGCCGACTCTGCTGGTTGCGATTCCCCAGGTGCCGCCGATGGCTTTCCAGTCAAGTTCGCCGGCTTCTCTACCATCACGGAGGTAACTGAGCCAGTACATGTACGGACGCAACTCGCGAATGTAGCTCATTCGATTTGGGTATGGCGGTGAGGTAATCACACACGTATAGTAATGATGTGGCAATAATGCTGAAAGGTCTCTGGCATCGCAGAGAAAAATCCCAGGCGTCGCACGTATGTCGCTGCGGGCAGACGAAACGATCTCGCTGACCGCAACTTCCCACGTCGCCCTCACCTCATCCGCGACATCATAAAAAAGCGGCGCGTTTATCTTTTGCTTGAAGGACATCGACTGGTGATCGAAACTGGCGCTCGAATGTGTGATTATAACTCTGCAAAACGCTATCTTGAGCAAATCTATAACCTTTTCCGGGTAAATCTCGCCCATTTTATTGATCATACCCATCATGTTACCAATTATTTGAAGAACATCACTATCCCACCATCGCTCAATCTGGTGAATTGGCGGAATCCAGACACCAGCAGAATTGGAGAGAGTGATAGATTCAGAAATAATCTGAGCGGCAGATTGAAGTTCCGCAATATCTTCCGAACTATATGGAGCAGTCTTAACTTTTGTCAGCCAGAGGAGAAAGGGATTGATATCGGTCGTATCGACAGTGATGCCTTTTTCTGCACAAACAAGGGCAGTTGTCCCTGTCCCGCAAAAAGGATCGAGGACAATGGCATCCTGTGGCGCTATGTGAGAAAGTATTTCTTGAACCAGATGAACCGAGTATGCGGGAGTCAACCTCAACCATCCGTAACGCGTCTGCCTGAGGTTTGCTTTGTGTGTCAGGTGGCAGGATAATCCGGGTTTGTGTGGTATCATGAGTTTTATTGTGGAGAAAAGCGTAGCATGGGTCGGTGCTGTACAGCACCTCGAATTCGCTCAGCGTCAATCGTAAGTGTTCACATTTCTTCCGGGAGCACGCGCATCGTGCCCTCGGAGACGTGATGCGGGCGAGACGCCCGCGCGCCGTTCAGGTTCATAGGTGCGCGCGCCTCCGGCGCGCATATCAGCAGCGCCTGCCCTGGGTGCGCGCGCCTCCGGCGCGCATATCAGCAGCGCCTGCCCTGGGTGCGCGCGCCTCCGGCGCGCATATCAGCAGCGCCTGCCCTGGGTGCGCGCGCCTCCGGCGCGCCCGCGCGCGAGACGCCCGCGCGCCATTCAGGTTCACGCGGGCGAGACGCCCGCGCTCCATTCAGGTTCACACGGGTGAGACGCCCACGCTCCGTACAGGTTCATGGGTGCGCGCGCCTCCGGCGCGCATATCAGCAGCGCCTGCCCTGGGTGCGCGCGCCTCCGGCGCGCATATCAGCAGCGCCTGCCCTGGGTGCGCGCGCCTCCGGCGCGCATATCAGCAGCGCCTGCCCTGGGTGCGCGCGCCTCCGGCGCGCATGCCAGCGAGGATATGCCTCCGGCGTGCAGGCGGGCGGGACGCCCGCGCTCCCGGGCGCGTGGGTTACCCCAGGGATGAACAGTTACCGCTGCGCTTCGCCGTCACCCCAGCACCCCTGTCACCAGCGCCAGCAACACGCCGCCAGCGACGACGCTGCCCAGTTGCCCGGCGGTGTTGGCACCCATCGCGTGCATCAGAATGAAATTGTCGGCATCTTCGTCGAGCGCCACTTTTGCTGCCAGACGACCTGCCATCGGGAAGGCGGAGATGCCGGCTGCACCGATCAGCGGGTTGATCGCCCCGCCGCTGACCAGCGCCAGGAACTTGCCGAACAGCAGCCCGGCGACGGTGTCCAGAATGAACGCCAGCAACCCCAATCCGAGCACTTGCAGCGTCACCAGGTTCAGAAACGAATCGGCGCTCATCGTCGAGCCAATGGTCAATCCGAGGAACAGGGTGGCAATATTAATGATCTCGTTCTGCGCCGCTTTGCTCAACCGATCCACCACGCCACTCTCACGCAGCAGGTTGCCCAGCATCAGCATACTGATCAGCGGCGTCGCCGCCGGCACCAGCATCCCGATAGTCAGAGTCACGACGATTGGGAACAGCACCAGCGCCCGCCGCGACACCGGACGCGGTGCGTATGCCATGCGGATGATCCGCTCGCGGCGCGACGTCAGCAACCGCATCAGCGGCGGTTGAATGATCGGCACCAGGCTCATGTATGAGTAAGCGGCGACCGCGATCGGCGCTAGCAGTTCGGGCGCGAGTTGCGAAGCGACATAGATCGATGTGGGTCCGTCGATAGCGCCGATGACCCCGATCGAAGCCGCCTGATTCAGCGGGAAGCCGAGGAGCATCGCCAGGATCAACGTGCCGAAGATGCCAAACTGACCGGCGGCGCCGAGCAGCGCCATGCGCGGCATCGCCAGCAACGGGCTGAAATCGATCATCGCTCCAACGCCAACGAAGATCAGCAACGGAAACAGTTCGGTGCTGATCCCGGCGCGGTAGAGGATGCCAAACAACCCTTCGCCGTCGGTCATGCCGGTCAACGGAATGTTCGCTACCAGGCAACCAAAGCCGATCGGCAGCAGCAACACCGGCTCGTACTGCTTCACCACCGCCAGGGCGATCAGCGTTGCCGCAACGGCGATCATCACCAGGTTGCCGGGGGTGAAGTTCGCCAGACCTTTGGTCAATTCGGGAATGAGCGTCGAAAAATCCATATGGAAGGTCTCTCGCTAATCCGGCGTGATGACCAGCAACGCCTGATGGTGTTTGACCTGATCCCCTGCTTTGACGTGCACCATCGCAACAACACCGGACTGCTTCGCACGAATGCTGTTCTGCATTTTCATCGCTTCCAGCACGCACACTTCCTGCCCTGCGGTCACCCGGTCGCCGGGCTGGACTTTGACAGCAACGATAATGCCGGGAATTGGCGCCAGCACTGCGCCGCTCTCAGGAGATCCACTCCTCGCTGGCATGGAAGCAGGCGTCGGTGTCGATGTCACCGGCGCCGGCGGCGGGACCGATGGCGGCAACCGACCGCCATCGAGCGAACCGATAGCCAGCACGGGTGACGCTTCAGGCCAGACCTCGAAGCGTTCTCCTTCGACGATAGCAATCACCGGACGCGCACTGAGATCGACGATCTCAACGTCGTATGCGGTTCCTTCGATCACGACACGCACTTTCATCATGGTTCCCGTCCCGGTCGCCCAAAGCGAACCATGCGCGTCGCCGCCTGCCATGGGCTGACTGCTGACGTTGGCGACACGCTGCTGCGTACCATCTGCTCTCGTGCCAGGGCAACGGCAACCGCCGCCGCTGCCGCACGCCGTCGTCGTTCGCGCATGGCTTCCTGATCCGGCAGCGAAACGCCAGCCTCAACCGATGGGGCGGCGGTCGTTTCTTCCCCGGCGCCCCCGGACGTCAGAAACGTGAGCAGCGCCATCAACCCCCACAGCAGAAAAAGCGCGCCAAAGGTGATGCTCATGCCAAGCGCCAGGATCTGCAGGGCAACGTTGAGATTATCGATCATAGCGTCACTCCTCCGCCACTACCCCAGATCACTGTTCACACCTGGAGGAACACACGCGCCTGGAATCGCGGGCATCCCGCCCCTGTCGCGTCTCCGAGGGCACGATGTCCTCGCTCCCGGAAGAAATGTGAACACGTACTACACCGGCATATTCCCGTGGCGTCGCGGCGGCGGCGCAACTGATTTGTTGCGCAGCGCGTCGAGCGCAGCGATCACCCGCGCGCGCGTCTCGCGCGGTTCGATCACATCATCGAAAAAGCCAGCCGCCGCCGCGTGGTAGGGATTGTTGAACTTCCGTTCATATTCGCGCGCGAGACGCGCGCGCTCGGCGGCGGGGTCGGGCGCTCTGGCGATCTGATCGCGGTACAACAGGTTCACTGCGCCATCGGCGCCCATCACCGCCACTTCGGCGCTGGGCCAGGCAAAGTTGATGTCGCCACCCAGCGGTTTGCTGCTCATCACGATATACGCCCCGCCATACGCCTTGCGGGTCACAATGCTGATCTTCGGCACGGTCGCTTCGGCATAGGCATAGAGCACTTTCGCGCCATGCCGGATGATGCCGCGATGCTCCTGGTCGATGCCGGGTAGAAAGCCGGGCGAATCGACAAAAGTCACCAGTGGAATGTTGAAGCAGTCGCAGGTGCGCACAAACCGTGCAATCTTGTCGGAGGCGTCGATATCGATCACGCCAGCCATAACGCCCGGCTCCTGTGCGACGATTCCGACACTGCGCCCGCCCATGCGCGCCCATCCGGTGATAGCGTTCATTGCCCACATCGGTTGCAATTCCAGCCAGGATCCGCGATCCACGACACGCTCAATGACATCGTGCATGCGATACGCCCGACCTGGATCAAGAGGAATGATCCGGTTCAACTCTTCATCGGCACGCAATGGGTCATCGTCATTCGGGAGAACAGGCGGGTTCTCGGTGTTGTTCGAGGGCAGGTAGGAAAGCGCGCGCCGACAGAGCGCCAGCGCCGTCTGATCGTCCGGCGCGGTCAGGTGACACGTACCGCTGATGGTCATATGCACATTTGCACCACCAAGCCCTTCCAGGTCGATGATTTCGCCGGTGACTTCCTTGATCACGTCGGGACCGGTGATGAACATGAAGGATCGCCGTTCGACCATGATGATCAGATCGGTGACGGCGGGCGAATAGGCTGCACCACCGGCGCACGGACCGAGCATCACGCTGATCTGCGGTACGACGCCGGAACATCTGGTGTTGCGGCGGAAGATTTCGCCGTAGCCGCCAAGACTGTGGACGCCCTCCTGAATGCGCGCGCCGCCCGAGTCGATCAACCCGATGATCGGCGCCCCTTCACTGAATGCCAGGTCCATCACCCGACAGATTTTGCGCGCCTGCGCTTCGCCAAGCGACCCGCCGAGAACAGTGAAATCCTGCGAGTAGACAAATACCGTGCGCCCGTCGATCCTGCCTGCGCCGGTCACGACGCCATCGCCGTAGAACGTTTCGCCATCGACCGGTCTGCCGGTGGTGTAGGGTTCCAACTCCTGAAAACTGCCGGGATCGAGGAGCAGATCAAGTCGCTCACGCGCCGTCAGTTTGCCGCGCGCGTGGTGGCGCGCGATGCGCTCTGGACCGCCGCCCTGCCGCGCACGTTCGCGCATTGCGCGCAGTTCCAGCACCCGCGGGTCCTCACCGGTCAGTGATTGATCGCCCGCGTCAATAGCCTGTGCTGTCGAGATATGTTCCTGCGATGGAGCGCCATCGGTCTCTGCCATTATTCCGTTCCTCCTGATATGCCTCCCATTTCCCGAAGACGTTCCGCTGCCGGGTTGTCGTCCATAGTGCAGCCATCTGGATCGGCACCGTCTCGGTCGTGATACAATGCCGATACAAACAAGGAGCATGCGCCTATGTCTGATGTCGTTACCCTCGGCGAGTGCATGGCTGTTCTGTACCCGCCCGATCCTGTCTCGCTGGACGAAGCCCGCACCCTGCTGATCGACATCGGCGGCGCGGAGGCGAACCTTGCCATCGCGCTCTGCCGACTCGGTCACAGCGCGCGTTTCATCAGTCGGGTCGGCGATGATCCGTTTGGGAGGCGGGTGCGCGCTGTGCTATCTACCGAGGGAGTCGATACATCCGCGCTTCTGATCGATCCCGAAGCGCCAACCGGGGTCTTCTTCCGCGAATGGCTCGCCGATGGCGCGCGACGTGTCTACTATTATCGCCGCAACTCAGCCGCGAGTCGAATCACGCCGGACGATCTCACGCCAGCACAGTTCAACGGCGCGCGCATTGTTCACCTGACCGGCATCACGCCTGCGCTGAGCGCGTCCTGCGCTGCCGCCTGCGAGCGCGCGATTGAACTGGCGCGCGCTGCCGGTGCGCTGATCTCCTTCGACCCCAATTTCCGTCCACGATTATGGAGCGCATCACAGGCGCGCGATACGCTCCTGCCGTTGATGCGCGCCGCCGATATCCTGTTGATCGGGCATGAAGATGCGCAGGCGCTCCTGGAAGTTGACAACGACGACGACGCGCTGATGGCGGCGGCAGCGCTGGGTGCACAGGTCGTGGTGCTGAAATGCGCCGAACGCGGCGCACGTGCGCTGGCGAACGGGCAGCACGTCACGACGCCAGCTTACCCGGTCCGCCAGGTGGTTGATCCGGTCGGCGCTGGTGACGGCTTCGATGCCGGTTTTCTTGCGGGATGGCTGCGCGGATGGAGTATGTCCGATTCGCTGGCGCTCGGAGCGCGCATCGGCGCGGCTGCGGTCGAAACATTGGGCGATTACGTCGGATATCCGCGCGTCTGAACGATGCACCGTTCAGACAAGGCGCTGCGATCACCGTATCACCAAATCACATCTGCTCACGGAACGACACACCGTACCGCTTGCGCGCATCGAGCCAGGCGCGCCGGATAAGTTCGCGTACCTCTTCCGGTTGATGCACATTGCGCAGCGTCACTTCCGGCGTCGACGGATCTGCGCCACGGAGGTGGATATCGCCAATGCCGAATATGCGCTCACCGGCGTTCTGCGTGAAATCGATATCCTGCAATCGCACCAGTTCGATATCGTCGATATTGCGTCCGATCAACCCACGATAGATGCGCACGCGCTCGGTTGTCAGCACATAGCGCTCGGTGATCGAGAGGAACGGACGCCCTTCCCACAACACACGCTCCTCCCCGGAGACCTCAGCAGAAACCCGAGGCGCTACCTCATCGAGCATCTGGTTCACGGTCGGCAGCAGGGTATCGGCGATTGCCGCCACCAGACGATCCTGCTGATCGCGCGGTACTGACGAGAGATCGACGCCGCTCTGTGCGATCGCCTGCCAGACGGCGGCGACCACGCGGGCGCGATTTTGTTCAAGCGTCATATGACACTCCTTGTCGTTTCAGCGATTGATCGTCGCACCGCTGGAAACGACCGTCTGCCCGCCGAACGACGCCGCAGTGACGCGGGGACGGATGACGACATTCCTGCCGATGCGCACATTCGCCGGTATCTGCGCACTCCGCCCGACGAGGGTCAGACCGGTGTTCAGCAGTTCAGGAGCGCGCTGGTTGGGGGTGTTATCCTCGCCATCGCCAACAATTGTGTTACTGCCGATCACGACTTCTTTATCAACGATGCAGCGATCCACCACCGCGCCCGCTTCGACGACTGCGCCGCTCAGCAGGATCGAGTCGCGCACCGTCGCACCTTCGGCAACGACCACTCCAGGAGCGATGATCGAGCGTGCCACCGTGCCATAGATGCGGCAGCCATCACAGAGCAGGTTGCCATCGACCCGCGCATTTTCGCCGATTTCAGCAGCCGGACGCTCCTCGCTCTTCGTGTGGATCACCCATTCGGGATCGTGCAGATCGAGCGCCGGGGTTTCGACGAGCAGCGCCATATTTGCCTCATAGTACGCCTGCACCGTTCCGACATCAGCCCAGTACCCCTGGAAATGGTACGACACGACGCTCGTCTGATGCACCAGTTTAGGCATCAGGTCGCGCCCGATATTCTGTTCATCGCCGCTCGCCAGCACTTCCATCAGGAAGTTTTTGCGGAAGACGTAGATCCCCATCGATGCCAGGCTCGAACGCGGACGACGCGGCTTCTCCTCGAACTGCGTCACAATACCGTCGGCATCGACCGAAACGATGCCGTAGCGATGCGCTTCGTGCGGGCTGACGCTATGCACCGCCAGGGTGAGATCGGCATCGAGGTCCTCGTGCAACTGAAGCATGGGGCGATAATCCATCTTGTACACATGGTCGCCAGCCAGCACCAGCACCGCATCGACCTTCTGTTCGGCGATGATGTCGAGGTTGGCGCGCAGCGCATCGGCATTGCCCCGCTGCCACGCCCCGCCTTCGCTGGTCAGATACGGGTGCAGCACACGCACCCCCCCGATGCGCCGGTCGAGGTCCCACGGCTTGCCGACGCCGATGTGTTCGTGGAGCGACCGCGGGCGGTACTGGGTCAACACGCCGACGTTGTAAATGCCGGAGTTGACGCAGTTCGAGAGGGTAAAATCGATAATCCGGTACTTGCCGGCAAACGGCACCGCTGCTTCCGAACGCTCGGCGGTCAGGACGCTCAACGCCGGACTTTCGCCGCCAGCCAGGATCATTGCGTATGTGCGAAGCATATGCGCCTCTAAATCGTCTCACCCGACTTGACATCGCCTGCCGGGAAATCTTCTTCCTCGCGGTCGGCATTAATGATGACGTTGCGCCCGATCCGGATGTGCGGCGGAATATGGGCGCCTTTGCCAACAATGGTAATGCCGGTCATCAGTTTATCGGGCTGCTCACGGTTCGGGGTTGTGAAATCATCGCCGCATCCCAGGCGCACCCCCGCTCCAACGACCACGTTCTTGTCCACGATCACCCGGTCGAGCACCGCGCCAGGACCGATCCAGGTATCGTTCATGACCACGCTGTCGCGCACAACTGCGCCGGGAGAGACGTACACACCCGGCGAGAGCACTGAATGCTCAACCGTGCCGCGAATGATGCACCCGTTGCAGATCAGACTGCGACTGACGCGCGCCTGCGGTCCCATCTTGGCGGGTGGGCGCTCCTCGCTGCGCGTATGGATGACCCATTCGGTATCGTACAGGTTGAGGGTATTGTTCGGGTTGAGCAGATCCATGCTCGTTTCCCAGTACGACTGGATCGTTCCAACATCGACCCAGTATCCCTGGAAGGGAAACGCATAAACCGCATCGCGTCCGATCATCGCAGGAATGACGTGCTTGCCGAAGTCGATGCGCGGCGATCCTTCGCCATTTTCGCTCAGACGTTTGACCAGCGTATCGACATTGAAGAGGTAAATCCCCATGCTGGCCAGTGTTCCCTTGTCGCGGTTCTTTGGCTTTTCGGTGAACTCAATCACCCGCTGATTCTCATCGACAGTCATAATGCCGAAGCGATCCGTCTCTTCGAGCGGCACATGCATGACCGCGACGGTCATATCAGCACGTTTTTGCTGATGAAACTCGATCATTTCGGCATAGTTCATTTTATAAATGTGATCGCCGCTCAGGATCAGCACCAGATCGGCGCGGCGCTCGTGAATGTAGTTGAGGTTCTGGTACACCGCATCCGCCGTGCCCTTGTACCAGCTTTCGTCGCGACGCCCCTGGTACGGTTGCAGCAACTGCACACCGCCGTTGGCGCGATCAAGGTCCCACGGCTTGCCGTTGCCGATGTGAGCATTCAGCGAATGCGGACGGTACTGCGTCAGTACCGCGACATCGAAGATGCCGGAGTTGACGCAGTTCGAGAGGGTAAAATCGATAATGCGGAACTTCCCGGCAAACGGCACCGAGGGCTTGGCGCGTTTCTCCGAAAGGACACTCAGCCGCGTTCCCTCGCCGCCAGCCATGATCATGGCAACGACTCGCACAGTCGGCCTCCAGCCACTGACGACAGGCGCAAAAGAGCGCTGCCGAAGGCGTATTGCAGAACGTACAGATGGGCGACCTGATGAGTTGCTTTCCATTTCAAACTATACCATACTCCTGCGTATGCTGTAAAGCGTTTCCGGCGCATTTTTGGGTCTTTCCACCTTCAAACGTCAACCCTGCCGGATCGCCTGCAACACCTGTTCCAACAGGACGCTATTGGTTCCGATTGCTTCGCCAGCGTGGATCGTTGGAATACCATTCCAGTCGGTGAATGTGCCACCCGCCTCGGTCACGATCGGAAAAAGCGCCGCGCAATCCCAGACGCTCATCACCGGGTCAATCATGATCTCGGCGCGACCGGTTGCGACCAGGCTGTAGCCGTAGGCATCGCCCCAGGTGCGCACCAGACGCACCGATCCTGCCAGACGACGGTAGGCGGATTCGCGCCCATGCGGCGCCATGCTCTCGGCGTCGCTGGAGAGAAGGGTCGCCTGGCGCAACTCGCTGACCGGTGAGACGCGCGCACGCCTGCCGTTCCACAGACATCCCTGCCCTTTCGCTGCGGTCAGAAAATCACCGAGCGCGGGGAAGGATACCGCACCGACCACCGATTCGCCGTCGCGCTCCAGCCCGACCAGGACACCATAAAGCGGCACGCCCTGAACGAACGATTTCGTGCCGTCAATCGGGTCGAGGATCCAGCGGTGCGACGCGCCGGGGCGCGTTTCGCCCTCCTCCTCGCCGAGAATACTGTGGTGTGGATAGCGATCCTCGATCATGCGACGCATCAATCGCTCCGCCTCGCGATCGGCAACAGTCACCGGCGTCTGATCGTCCTTGATATCCGGCGTGAGACCGGTTTGAAAATAGCGCAGCGTCAACCGACCGGCATGCCACGCCAGGTCGGCGGCGAATTCGCGCAGCGCGTCAAGCGTTTCAGAAGCCATGCGCTCTCCTCTGCGAACCACGGGTTTTCTGCTCACCAGCCTCTGCATTATAGGATATCTTGCTGATCCGGTCGCAAGCCCCGAATGTGTGGTATAATGTCGAGGTTGTTATCATCGAGATTGAGCTGAGTGGACGACTTGGCTCAAACGTAGCCAGGGAGGACACTCAGTGTCGTTCGACTCATTTCGCTTTCATCCGCAGATTACCGCCGGTATTCGCGACCTCGGATACCATACGCCGACTCCTATCCAGGAACAGGTTATTCCCCACGCTCTGGACGGGCGTGATGTCATTGGCATCGCGCAAACCGGCACCGGCAAGACGGCAGCGTTCGTACTGCCCATCCTGCAACGCCTCATGCGGGGACCGCGCGGTCGTGTGCGTGCCATGATCGTCACGCCGACCCGTGAACTGGCGGAGCAGATTCAGGGGGTGATCGAGGCGCTCGGCAAATACACCGGGCTTCGCAGCGTCACCCTGTACGGCGGCGTCGGGTATCAGGGGCAGATCCAGCGGCTGCGACGCGGCGTCGAGATTGCCGTCGTTTGTCCGGGGCGTTTGCTCGACCATCTGGAACGTGGGACGCTAACGCTCGAGCATCTGGATATGCTGATCCTCGATGAAGCCGATCAGATGTTCGATATGGGATTTTTGCCCGATGTCCGCCGAATTCTGCGCCTTGCGCCGGCGCAGCGTCAGACGATGCTTTTCTCGGCGACAATGCCCGACGCGATTCGCGCACTGGCGCGCGAGGCGTTGCGTGAACCGCAGACGATTCAGATCGGGCGCAGTGCGCCGGTTTCCACTGTCACCCACGCGATCTATCCGGTTGCCGAGCACCTGAAGACGGCACTGTTGATCGAGTTGCTGCGCCACACCGACACCGGATCGGTGCTGATTTTCACCCGTACGAAGCACCGCGCGCAACATCTCAGCGATACACTGGCGCGCATGGGGTACCGGGCGACAGCATTGCAGGGCAATATGTCGCAGAACCGTCGCCAGGCGGCGCTTGACGGGTTCCGCAGCGGCAGGTATCAGATCCTGGTCGCAACTGATATTGCCGCGCGCGGCATCGATGTGGCGCATATTTCGCACGTCATCAACTACGATATGCCGCAAACCGCCGAGGCGTACACCCATCGCATCGGGCGCACCGGGCGTGCAGCGCGCACCGGGGACGCATTTACGCTGGTAACCCGTAGCGATACAGGAATGGTGCGCGCTATCGAGCGCCTGATCGGCGAGCCGTTGAAACGCGAAACCGTGCCCGGCTTCGATTATCACGCGGCAGCGCCGGCACACGATGCCCGGTCTGATCACGCACCCCGTCACCACGCAATGCCGCGCCACTATGAGCCACATTCCCAGGATGAGCGGGACAATCGGGCGCCGCGCCGCCACGATGCGCAAGAGCGGCGATCTGATACCGCGCCGCGCCGTCGCGATGTGCAAGAGTGGCGATCTGATGCCGCGCCGAACCGCCACAAACCCCGCTCCCGCGATACGTCTGCGCGTTCAACCCGCGCCGATCGCTCTGATCGAACGGTTTCGGGGCGGCGACGACCGTAATGTTATTCCAATGCACCGTTGCCCTTTATCCCCTGCCCTTACAGAGGCAGGGTTTTTGGAAGTCCCTGTGTTCCTTCGCTCGTTTTGGGCTTCAGGACGCCCAAACGCCCTCTTCTCCCCGTGTGGGTTGAAAGGGGGGATTCGCAGGCAGTGTGTCAACCGTTTCCGTTCCACCGCACACCTGGGCCGATCCGTCGGTAGCATGATCATCACGGAAGGATGGCACGTCACGGAGGATGAGGATGTCCCGCACGTCCACGGAACGGCTGTCTGGCGCGTGAACGGCAAATACGCGGGCAGTGGATGGCCCGCACGTCCACGGAACGGCTCGTGCAGCAGCAGCACCAGCCCCGCTTCCCGCGCGTGCTGCGGCGCTGGTGCTGCGCCCTGTCCCGCTGGGTTATGGGCGCCTGCCTGGCGGGGAGCGCCAATGGTCCGGCGCTGGCGCCGCCGACGACCGGCGCGCCGCCGCGCCAGCGCGCGAGCGGCGTGGCGCAGCGGGTGATCCGCCTGCTCCAGCGGGGGAAGCACCAGCTGCGCTGGTTGCTGGCGCACAGGCGTTGGTGGGTCCGGTTGTGGGTGCGCCCGGAGCCGTTGCCGAAAAGAGGTGACAGGATCACCATGCATATGTATACCCCGTCCCAATGCCTGAAATCGCCCTAAATCCCCCCCCTTTCACCCCCTTCTCCCACACAGGGAGAAGGGGGATTCTGGGCGTCCTGATGCCTGAAACGGGGGATAGCACGCGGGGGCGCGCCGCTGCCCCCTTCCTTTGCCCCTCATCCCCCCTGCCCTCTGCTTCCGCACGGGGAGAAGGGGGAGTTTGGGCGTCCTGATGCCTGAAACGGGGGATAGCACGCGGGGGCGCGCCGCTGCCCCCTTCCTTTGCCCCTCATCCCCCCTGCCCTCTGCTTCCGCACGGGGAGAAGGGGGAGTTTGGGCGTCCTGATGCCTGAAACGGGGGATAGCACGCGGGGGCGCGCCGCTGCCCCCTTCCTTTGCCCCTCATCCCCCCTGCCCTCTGCTTCCGCACGGGGAGAAGGGGGAGTTTGGGCGTCCTGATGCCTGAAACGGGGGATAGCACGCGGGGGCGCGCCGCTGCCCCCTTCTCCCACACGGGGAGAAGGGGGAGTTTGGGCGTCCTGATGCCTGAAACGGGGGATAGCACGCGGGGGCGCGCCGCTGCCCCCTTCTCCCACACGGGGAGAAGGGGGAGTTTGGGCGTCCTGATGCCTGAAACGGGGGATAGCACGCGGGGGCGCGCCGCTGCCCCCTTCCTTTGCCCCTCATCCCCCCTGCCCCCTTCTCCCACAAGGGGAGAAGGGGGGATTCTGGGCGTTCTGATGCCTGAAACGGGGGATGGAGCGCACTGCTTCCTTCAGGCGGTGCGGTCGTGATCGTTCCGTAACAAAACTGGCATGAAACCGCTAACGTTCTGGCACATTTGCGAAAGAGGTTTGAAGTATACTGTGCGGTAGTAAAACGCGCCGCAGAGCCGCTGAGTGAAAAATCTTTTTTCCGCCCTCTGCGCCCCGGCGGTGAAAAATAAATGCACCGCAGCGACGCTGAGAACGCTGAGTGAAAAATCTTTTTTCCGCCCTCTGCGCCTTAGCGGTGAAAAAGCAAATGCACCGCAGCGACGCTGAGAACGCAAAGTAAAGAATATTTTTTGCGCCCTCTGCGCCCCGGCGGTGAAAAATAAATGCACCGCAGCGACGCTGAGAAAGCAGAGTGAAAAATCTTTTTCCGCGCCCTCTGCGCCTAGTATAATCTAACGGGACACGGTATACCGTTCTGCGCCAGGTTCACGAGATCGCCGCGGAGTGTTGGGTAGCCGTGTCCTTCAACGCGACCAAGCCGAACAGTTATCTGGGCCCTCAAACCCGCATATGCTAGCAAGGCTGGCGCCGTTTTCCTCAGGAGGTTCTGTGTATGGCTTCCCGTGAGTCGCTCTTTATCGGCATTGATGTCTCCAAACAGACGCTGGATGTGGCGTTTGGCGCCGACCCGCACGCGCCACGCGAGACGATACCGTCTACCGACGAAGGTGTCCAGCTCCTGGTCACGCGACTCCAGCGCCTGCAGCCGACCCTGATTGTGCTGGAGGCGACCGGCGGGCTGGAGCGCATGGTGTTCGCCCAACTGCTCCAGGCTGGCTTGCCGACGGCGCGGGTGCAGCCACGCCGCGTGCGCGCCCTGGCGCACGCGGAAGGACGCCAGGCGAAGACCGACCGCCTGGATGCCCGGTTGCTCGCCCGCTTTGCCGAACGGGTGCGCCCGCCGCACCACCAAGCGACGGACGAGCAGCGCGCATCCTTGCGCGACCTGCTGGTCCGGCGGGAGCAGGTGATTCAGATGCGGACGGCTGAGATCAATCGGTTGACGGCTGCCGCGCCGAACCTCCGCCCGGGCATCCAGCAGCATATTGATTGGCTGGATCAGGAGATCCGTGCGCTTGAGCAGGAACGCGACAACGAGGCGGAGCGCACCGACGAGGTGCGCCGGAAACGGGAGCTGCGCGAAAGCGTGCCCGGCATCGGCGCGATCACCGCACTGAACCTGCTGCTCCGCCTGCCCGAACTGGGGACCATCAATCGCACGGAAGCGGCGGCCTTTGTGGGCGTTGCGCCGTATGCCAATCAGAGCGGCGCACAGCACAAACCCCGGCATAGCTCCGGCGGCAGGAGGGATGTGCGCAGCGTGTTGTACATGGCGACCCTGGCGGCCACGCGGCGCCGTCTGGTCAGGCGCGCCTTCGATCAGCGCCTGTGTCAAGCTGGCAAGCCGCGCAAGGTCGCCATCGTCGCTGCGATGCGCAAGCTGCTGACTATTCTCGGCGCAATATTGCGTCAGCAAAAGCCCTGGGATCCGGCTGTGCATACGAGCGCCCCTTGACAAGCAACACAGTTACTCTGCGGTGAAAAATAAACACACCGCAGCGACGCGGCGGACGCGGAGCGAAACGTCTCCGCGTCCTCTACGTCGCTGCGGTTCATGCGTGCCGTGAAGTCAATGATGCACGGTGTGCTCTTCCATTCGCCGCACCTGCGGATACGCCGGCGTCCACATTGTTGCGTTGATGCGCGCGGTCTGCTCTTCGGCGCTGAGCGGCGCCGCCAGCCCGGAGCGCACGGCCTCGGCAGCGACTGCCTGCGCCACGGCGCGTGAAACGTCGCGCACCTGGGTGAGCGATGGGTAGAGTGACGCCGTCGGGTCCTGGCGCGCCGGTGAGAAGGCGCTGAGTGCGCGCGCGGCGGCGATGAACATTGCGTCGGTGACGCGCTTCGCGCCAACGGCGATGACACCCAGCCCGACGCCGGGGAAGATAAAGACGTTGTTGCATTGCCCGATCGTGAAGGTGCGACCGCCGTAGGTCACTGGCTCGAAGGGGCTGCCGGTCGCAACCAGTGCGCGTCCCTCCGTCCACGCGATCAGGTCAGCCGGAACAGCCTCGCTCTTTGAGGTGGGGTTGGAGAGCGGGAAGATGACCGGACGCTCGACATGCCGCGCCATCTCACGGATGGTGCGCTCGTCGAATGCGCCGGGTTGCGCCGATGTGCCGATCAGACACGTCGGACGTACATTTGAAACAACATCATACAGGGTGAATGCTTCGCTCCCTTCGCGCGTCCACCCCTCCAGCATCTCGTAGGGTTGGGCGTAGAGCATTTTCACCGCTTCGAGACCGGTACGCCGGGTGTGAACCAGATCGCGGCTGTCGATCAGCCAGATCGTCCGCCGCGCCTGTTCGAGCGGGATGCCCGCTTCGACCATGACGGCCACGATCTGTTCAGCAATGCCGGTCGCTGCCGAACCTGCGCCCAGCATGACAATGCGCTGATCCGCCAGCGGCACGCCGGAGATCTCAACTGCAGCAAGCCACCCTGCCAGTGTCACCGCACCGGTGCCCTGAATGTCGTCGTTGAAACTGAGAATCCGGTCGCGGTAGCGGTCGAGCAGGTTGCGCGCGTTATCCTTGGCGAAATCTTCCCATTGCAGCAATGCGTGCGGGAAAACCTTCTCCACTGCTGTGACGAACTGCTCGATAAAGTCGTCGTACTCTCTGCCGCGCACCCGCTCATGACGCCACCCCAGGTAGAGCGGGTCGTTGAGCAGCGCGGGGTTGTTGGTGCCGACATCGAGCACGATCGGGAGTGTGGTTGCCGGATGGATTCCGGCGCAGAGTGAGTAGAGCGTCAACTTGCCGATTGGAATGCCGATGCCGCCCATTCCCTGGTCGCCGAGGCCCAGGATGCGCTCACCGTCGGTGACCACAATCACGCGCACCTGATCGGCGAAGGGCCAGGCGCGCAGCATCGTTTCGATCTGATCGCGGTGCGGATAGCTGATGAACAGACCGCGCGGGCGGTGGAACAGGTGACTGTAGCGCTGGCAGGCGACGCCGACTTCTGGCGTGTAGATGATCGGCATCATTTCGGTGATATGCTCAAGCAGCAGGCGGTAGAAGAGCGTCTCATTCCGGTCTTGCAGATCGGTCAGGTAGAGGTACCGATCCAGGTCGTTGGTGCGCTGCTGGTAGTTGCGGTAGACACGCGCCAGTTGCTCGTCGATAGTCGAGATGTGGTACGGCAGCAGCCCCAGCAGACCAAGCCCGATGCGCTCTTCTTCGCTCCAGGCGCTGCCCTTGTTCAGCACCGGCGTGTTGAGTACATCGTGTCCGGTACGGTCGGTCTCGACGGTTCTTCCTTCATCAGCGAACCGGATGCGGATCATGGCGGCCTCCGAGTTTCAAAAAGAACGACGGCGCGCGTTGCGCCGTCGCTTCGCGATCTGCCTGGCGAAGGTATCATACGCCGCTCATCGGTCTGCGCGAGTGAAGGGATGCAAACGAAGAGAGAATATTTATGATCGCAGCGGTTGCGATTCCTCTTCGAGCGCCAGGGTGCGCCGCAGTTCGACGATCTGATCCCGCAGTGCGGCCGCCTTCTCGAATGCCAGGTCTTTCGCCGCCTGCTTCATCTGCTTCTCCAGTTCCTTGATCAGTTTGACGATCTCATCCTTCGGGATCGGTAGTTCTGCTGGCGCTTCGGCGACCTGATAGACGCCGCGCTCCTCGGCAACCTTGCGCACCCGGTCGGTCAGGTCGCGCACGGCTTTGGAGATGCCGACGGGGGTGATGTTGTGTTCGCGGTTGTACGCTTCCTGAATGGCGCGTCGCCGGTTGGTTTCATCAATCGCGGTGCGCATCGATTGCGTGATCGTGTCGGCGTACATGATCACGGTTCCCTCGATATGCCGCGCTGCGCGCCCGATGATCTGGATCAGCGAAGAGCCGCTGCGCAGATACCCTTCTTTGTCGGCGTCGAGAATGGCGACCAGCGATACTTCCGGGAGATCAAGCCCTTCACGCAGCAGGTTGATGCCGACCACCACATCGTACACGCCGAGTCGGAGATCGCGCAGGATCTCGACCCGCTCCAGCGTCTCGATATCGGAGTGCAGGTAGCTGGTGCGGATGCCCATCTCCTTGAGATAATCCGCCAGGTCTTCCGCCATCCGCTTGGTCAGCGTCGTGACCAGCGCGCGCTGTCCTTTCTGCACCCGTCGCTTGATCTCCCCTACCAGGTCGTCGATCTGCCCTCTGGTCGGACGCACTTCGACAATCGGGTCGAGCAATCCCGTCGGGCGGATGATCTGTTCGACGATCTGCGCCGAGTGTTCGTACTCGTAGGGTCCCGGTGTCGCCGAAACGTAGATCGCCTGGTGAATATGCCGCTCGAACTCATCGAACCGCAGCGGACGGTTGTCGAGCGCCGATGGCAGGCGGAACCCGTATTCGACAAGTGTTTCTTTGCGTGACCGGTCGCCAGCGTACATGCCGCGGATCTGCGGCAACGTGATGTGTGACTCGTCAACGAACAGGATGAAGTCGTCGGGGAAGTAGTCGAGCAACGTCCAGGGTGTTTGCCCGGCTGCGCGGCGGTCGAGGTGGCGCGAGTAGTTCTCGATGCCGGAGCAGTACCCGACCTCGGAGAGCATTTCGAGATCGTAGTTGGTGCGCTGTTTGAGACGCGCCGCTTCAAGAAACTTGCCCTGCTGTTCAAGTTCGGCGACACGCGCTTCCAGTTCCGCCTGAATGTCGGCGATGGCAAGTTTGAGCGTTTCGGCGGTTGTGATGAAGTGTTTCGCCGGGTAGATGTCTACCGCCGTCCGATTGAGCAGCACTTCGCCGGTCAGCGGATCGAACTCGGTAATGCGCTCGACTTCATCGCCCCAGAACTCAACCCGCAGCGCAATCTCCTGGTTGGCGGGAAAGATGTCGAGCGTATCGCCGCGCACACGGAACGTACCCCGGTGAAAATCCACATCGTTGCGCTCGAATTGCAGGTCGAGCAACTGGCGCAGCAGTTTGTCGCGGTTGCGCACCTCGCCGACGCGGATTGGAATGACGACCTGCCCATACTCGTGGGGCGAACCGAGACCGTAGATCGCCGACACCGACGCGACGATCAGAACATCGCGCCGGGTGAAGAGCGCCTGGGTGGCAGCGTGGCGTAGCCGGTCGATCTCTTCGTTGATCTCGGCTTCCTTTTCGATGTACAGGTCTTTGCTGGGCACATACGCTTCAGGCGTGTAGATGTCGTAGTAGGAAATAAACATCTCAACCGCTGCATCGGGCAGCAGTTCGCGAAACTCGGCGTACAACTGGCTGACCAGCGTCTTGTTGTGCGCCATGACCAGCGCCGGTCGTTCAAGCTGGCTGAAGACATGCGCCATAGTCAGCGTTTTACCGGTGCCGGTTGCGCCGAGCAGCGTCTGATGCTTGTATCCGGCGCGGATCCCCGCAACCAGTTGAGCAATCGCTTTGGGTTGATCGCCCGCTGGCTGGAAGGGCGCTTCAATACGAAAAGACATGCCTCTGGGTCTCCTCTGGTTGATCCTGGTGACAATGCGCGTCTGGCGTGACGTCAACGTCGCAGCGTCGGAAGCTATGAGACCGATATGCTTCCCCTCTTCCGCAGCAACAGCGCGCCAGCGCCCGGCAGGATGAACCGTGTGTCTCATCATCAGGGTATCTTTTTCATTATACTCTTTTTGCTGCATTCCCGCGCCTGTTGCCCCTCATCCCCCTGCCCCCTTCTCTCACTAGCAGTTCTCAGATACGTTGACCCCTGTCCTGGTCTGCCATGTTGTGCGAGGCGCCCGTTGCCGGCAGAGCGTAGACCGAAATTCATTTCGGTCGCCGTGTGGGGCGCGCTATTCCCAGGAGTGTTCAACCTGTCTATCAGGTTCAACCTTTGTGAGAACTGCTACACAAGGGGAGAAGGGGGCGTTTGGGCGTCTTGATGCCTGAAACGGAAGATGGCGCGCAGGGGCTTCCCCAAAAAACCTGCCCCTGTAAGGTGGCAATACCTGGGAGCGCGCCTCCGGCGCGCCTGCGGGCGGGGAGGCCCGCACACCCGCGAGGTGGCAGTGCCTTCTCAAGGGTAGAGTTCTCAGGAGCAATGCGCGGTGTGCTGCATTCCCGCGCCTGTTGCCCCTCATCCCCCCTACCCCCTTCTCCCACAAGGGGAGAAGGGGGCGTTTGGGCGTCTTGATGCCTGAAACGGAAGATGGCGCGCAGGGGCTTCCCCAAAAAACCTGCCCCTGTAAGGTGGCAATGCCTGGGAGCGCGCGCCTCCGGCGCGTCTGCGGGCGGGGACGCCCGCGCACCCGCGAGGTGGTCGTGCCTTCTCAAGGGTAGAGTTCTCAGGAGCAATGCGCGGTGTGCTGCATTCCCGCGCCTGTTGCCCCTCATCCCCCCTGCCCCCTTCTCTCACTAGCAGTTCTCAGATACGTTGACCCCTGTCCTGGTCTGCCATGTTGTGCGAGGCGCCCGTTGCCGGCAGAGCGTAGACCGAAATTCATTTCGGTCGCCGTGTGGGGCGCGCTATTCCCAGGAGTGTTCAACCTGTCTATCAGGTTCAACCTTTGTGAGAACTGCTACACGAGGGGAGAAGGGGGCGTTTGGGCGTCTTGATGCCTGAAACGGAAGATGGCGCGCAGGGGCTTCCCCAAAAAACCTGCCCCTGTAAGGTGGCAGTGCCTGGGAGCGCGCGCCTCCGGCGCGCCTGCGGGCGGGGACGCCCGCACACCCGCGAGGTGGTCGTGCCTTCTCAAGGGTAGAGTTCTCAGGAGCAATGCGCGGTGTGCTGCATTCCCGCCCTGTTGCCCCTCATCCCCCCTGCCCCCTTCTCCCACAAGGGGAGAAGGGGCGTTTGGGCGTCTTGATGCCTGAAACGGAAGATGGCGCGCAGGGGCTTCCCCAAAAAACCTGCCCCTGTAAGGTGGCAGTGCCTGGGAGCGCGCGCCTCCGGCGCGCCTGCGGGCGGGGACGCTGGCGCACCCAGGGGATGGCAGTGCCTGGGAGCGCGCGCCTCCGGCGCGCATACAGGCGACTGACTCCCGCGCACCGATCAACCGATCGCCAATCAATGCTATAATAGAACATCGGTACGAGAAACGACGTGCAAACAGAGTGGAGCAACGTATGACCCCTGCCGAGCGCCGCGCCTTCGAGCGCCAGTTGCAGCAAGAGTTCCCCGGTCTCGAGTTGCACGCCTGGTATCGCCAGTATCGCAGCCTCAAAGCTGCGCACCCCGACGCTATTCTGCTCTACCGTCTGGGCGATTTTTACGAGACGTTCGACGATGATGCCAAACTGGTCGCCGATCTGCTCGAAGTGACGCTGACTTACAAAGAATTCGCCAGCCAGAAGGGGCGCGACCAGAAGCAGCGCTGCCCGATGGCAGGCATACCGTACCACGCGGTCGAAGGGTATGTGGCGCGGCTCGTCGGCGCCGGGTATCGCGTCGCTATCGCCGAGCAGATCACTGAGACCCCTTCCAGTCGCACCGATACGCGCCCACGTTCGATCTTCGCCGCTGGCATTGAGCAAACGTCGCTCACCGGCAGCAACCGGATGGTCGAGCGCAAGGTGGTACGGGTGATAACGCCCGGCACGATCATCGAAAGCGGCATGATCCCTGCCGAGCGCAACAACTACCTTGCCGCTCTGATCGCCGATCACGGGCGGATCGGTCTGGCATACGCCGACCTGAGCACCGGTGAGTTCGCTGCCGTCGAGTTCAGCGGCGAACGTGCGGCGCAACAGGCGCAGGGAGAACTGACGCGCCTCAATGCCGCCGAAATCCTGGTTCCCGACCGCGCCGACCTGCGCCTGCCCGGTCTTGAGCCGTCCAGCGCTCGCCTCGAGCAGGACCTGGAGTTCCTCACCCGCGAAGAGCGCGAACTGCTCCTTCCGGGTGAACGGGTGGCGCGGCGTGTTGAGCGTGAAAACAACGCGCGCTGGGCGCACGGGCGCGTGACCGCCTGGCCCGAACGACGCTGGGATCTGCGTAATGCGCACGATACGCTGCTCCACCAGTTCGGCGTCCGTTCGCTCGCCGGTTTCGGGCTGGAAGACCGTCCGCTGGCGATCCGCGCCGCTGGCGCTATCGTGCAGTACGCGCGCGAAACGCAGCAGGGAGTGGTCGCAAATCTGCGCTCGATCCGCGCTTACACCCCCGGCGATGCGATGTTCCTCGATCCGCAGACTCAGCGGAACCTCGAATTGCTGGAAGGCGCCAGCGGCACGACGCGCGGCTCGTTGATCGGTGTGCTCGATCAGACGCGCACACCAATGGGGGCGCGCCTGCTGCGCCGCTGGGTTTCGCAGCCGCTGTGCGATCTGACGCGGCTGCATGCCCGCCACGACGCAGTGGAACGCTTTGTCACCGATGCCATCCTGCGCGCATCGGTGCGCGAAACCCTGCGACGAGTCGGCGACATGGAACGGGTCGTCAACCGGATCATTCAGGGGGTTGGGGTGGCAACGCCGCGCGATATGGCGCGGTTGCGCGATGCGTTGCGTGCGCTCCCTGAACTTGTCGCCGCGCTCGGCGATTGGACGCCGCCGCCGGGCGAGATCGATCTCACTGGTGTGCGCACCCTCCCGCCGTCCGCAGCGACCGATCCCGTGTCGCTGACGGAAAACGGCAATGAGCGCATCGAACCGAACCAGACGTCGGCGGTCAGTCTGCGCGCACAGCGCGAGGCGCGTCGGCGGGTATCGGCGCGCTACGCCGATGAAGACCTGTTTGGGGAGGAAGAGCAAAACGCACCGCCCGTCGGGTCGTCGAACCATGCCGTCGGAACACAACCATCGGCAGATGATGAAGCCTCTCCCGTCACAGCGTTCGTGGACGACCAGGCGACCGAAACGCTGGCGCTTGATCCGTGCGCCGATATGCTGGCATTCCTGGAGACCGCCATCGATGACGAGCCGCCTGCGCTGCTTGGCGCGTCCAACTATCTGCGCGCAGGGGAGAACGGCGAGCCGCCGCGTCGCGTTATCCGCCCCGGTTTTGAACCGGAGATCGATCAGGTGGTGGCGGCAAGCCGTGACGCACAGCGCTGGATCAGCGAACTTGAACCGAAAGAGCGGGAGCGCACCGGCATCAAGTCGCTGCGCGTCGATTATAACCGCGTCTTTGGCTATTACATCGAAGTGCCCAAAACCTACGCCGATCAGGTGCCGAAACACTACATCCGCAAACAGACGCTGACAACCGGCGAACGCTATTTCACCGATGAACTCAAGCGCTATGAGGAGATCGTTGAGCAGGCGCAGCAGCGTTTGATCGATCTCGAACGACGCGCTTTTGCGCGAATCTGCGATGTGGTGACCGGCGCCGGAGCGCGGTTGTTGCGCACGGCGCGCATGATCGCAACCATCGATGTGTTTGCAGCGCTGGCGGAAGCGGCAGTACGCGGGCGTTACGTGCGCCCCGAACTGTACGACGATACCCGCCTGCGGATCGTCGGCGGGCGGCATCCGGTCGTCGAGCAGACCCTCGATGAGACGTTCGTTCCAAACGACATCGAGATGGACACGGAGACGCGCCAGATCTGCCTGATCACCGGTCCCAATATGAGCGGCAAGAGTACGGTGTTGCGCCAGGTGGCGCTCATCGCCCTGATGGCGCAGATTGGGTCATTCGTACCCGCCGATGCCGCCGAGATCGGGCTGGTTGATCGCATTTTCACGCGCATCGGCGCTCAGGACGATATTGCCACCGGTCGTAGCACGTTTATGGTCGAAATGACCGAGACTGCGGCATTACTGGCGCAGAGCACCCGTCGCAGCCTGATCATCCTGGACGAGGTCGGTCGCGGCACCAGCACCTACGACGGGATGGCAATTGCGCAGGCGGTCATCGAGTACATTCACAACGAGCCGCGTCTTGGGTGTCGCACCCTCTTCGCAACCCATTACCACGAACTGACCGACCTGGAACGCACCCTGCCACGTCTCAAGAACTACCACATGGCAGCAACCGAGCAGGATGGGCGGGTAGTGTTTCTCCACGAACTGCGTCCCGGCGGCGCCGACCGCTCGTATGGCATTCACGTTGCGGAACTGGCGGGCATCCCTCAATCGGTCATTCGTCGGGCGAGCGAGTTACTGGCGGAACTGGAACGCCGCGCGCCGCGCAGTGCGCCGCCGACGGTTCCTGCACGCGGTGACGACCGCCGATCTGCGGGACGTGCGTCATCGTCCGGTGCTGGCGCGGCGCGCGGCGAGCAGGGTCGCACGCTTCCCGACGGGCAACTCTCACTCTTCGACCTGGCACCCGGACCGGTGATCGAGATGCTGCGCCGGATCGATATCAATCAGTTGACGCCGCTGGAGGCGCTCAACAAATTGCATGAACTGCAAAAACTGGCGCGCGCTGGCGGCGGGTGATACAGGTTACCAGATGAACGGGATGATCTTCTTCACCCGCTTCTGGTAGTCGGCGTACTCCGGGTAGCGCTCGACCAGCCAGCGTTCCTCACGGCGCGATTTGAGGTGGAAGAAGACCAGCAACGCAACGCTCAATACCAGTGCGATGATGCTGCCGCGCAGCAGCGACCAGCCGAATGCGCCGATAATGATCCCGCTATAGATCGGGTGACGCACGATCGCATATGCGCCATGCTGCACCAGCCTGCCATCGTCGCGCGGGCGCGGAAAGGGGGTCAGATTTGCGCCGAGATGCAACAATCCGGCGCCTGCCAGCATTGCGCCGCATCCACACAGCACTACACCGACAATCAACGCTCCCTGTCCCAGGATCGTCGCAAGCGTCGGAAGTCCCGGAAGTTCCGGCGGCGCCGCCACGAGCGCGAACAGCAGACCAAACTGAGCGGTGACCCACCACCCGCCTCGTTCGATGAATGTTTGCATCATGATCCGCACCTTCTGTATCATGTCAGGCGTTGTCAGAACAAAACACCCGTGATGGTCGCCGGTCTTCGTCCTTGATTGAACACGTTGCTGCACCGGCAGCGCCGGGTGAGTGCCGGTATGGAGCTCTGCATGGATCGAGATATGTATGCCAGCGCATTGGAGCGTGCTGTTATCGCTGATGAGCGCACTGCCGGACGGATCTTTATGCGCGGACGCGACCGCGCGGCGCTGCTCCATCGCCTCTCAACCAACGACATCGAACGACTGAAGCCGGGTGAAGGGACGCTGACCGTCCTCACAACCCCGATTGGGCGGATCATCGATCTGCTGACCGTCCACGCATTGAACGATGCGCTGCTGATCGTGACCAGTCCCGATCAGGGACCGCCGGTGTTCGGGCATTTGCGCCGCAACATCTTTTTCAATGACCAGGTGACCCTGGACGCAGCCGGGCGCACCCACGCGCAACTGGCGTTGTATGGACCGCAGGCGGCTCGCCTGATTGCAGAACTGACCGGTGCTGCCATTGACCTGCCACTCCATGGTATCACGACAACTGCCATTGCGGGGGTCAGTCTGCTGATAGCGCGCCGCAAGCCGATTGGCGGTGACAGTTTTACGCTGTATGTTCCGTCCGACGGGTATGATGCCGTCCAGGCTGCGCTCCTTGCCGCTGGTGCAACGCCGATCGACGGCGACACGCTCGATGTGCTGCGGATCGAACGGGGATACGGCGCATTCGGGCGCGAGTTGAGTCAGGAGTATATTCCGCTGGAAACCGGCTTGCTGGATGCAGTCAGTTTCAGCAAAGGATGTTACGTCGGTCAGGAAATCATCGCGCGGATGGAGAGTCGCGGTCGCCTGGCGAAGCGCCTGTGTGGTCTCCAATTGAGTCAACCGGTTGCCTCGCCCGCGAAACTGGTCTGTGACGGCAGAGATGCCGGTGATCTCACCAGTGCTGCGGTATCGCCACGGTTCGGTCCCATCGCGCTGGCATATGTGCGTACAGTGTATGCTGAACCGGGAACAGTTGTTGGAGTGGAAGGGACCGGAGTAACAGGCAGAGTAGTCGAACTGCCGTTTGCGGCGTAAAGGCAGAGACATCCATCCAGCAGTCTTACGCTTCTTCACCGCGCAGACGACGCAGTTCGGCTTCCAGCGCGCGCAAGCGGGCTTCCACTTCGGCGCGGGCGCGGGCTTCGGCTTCGGCACGGGCTTCGGCTTCGGCGCGCGCTCGTGCCTCAGCTGCGCGAGCTTCGGCTTCGGCGGCGGCGCGGGCTTCGGCTGCAGCAGCGCGCGCTTCGGCATTCATCCACGCCTGCGCTTGCGCTTTGGCTTCCGCCAGCGCTTCGGCGACCCGCTCCTCCGACTCGATCACCTGCGTGACCAGGTCGGCGTAATCTCCCAGTTGTCGTCCCTGTTCGTCGAAGCAGTACACCTCGCCGTCGCGCACCCCGATCCAGACCCGCAGCGGTTCCAGCCACAGCCACCCGCGCGCATCCGGCGTCATCGCGCGGTACGCCGCGCCCGCGCGCTCATACCCCAGCACCCGCACCGTCGACGTCCCGCGTCGCTCCACGGCGTCCACAATCACATAGTACGGCACGCCCGCCAGGTCGTAGTGGTCGACCTTCTCGTAGAGGTCGAAGCGGCGCGTTTCGGGGGAGGTCACTTCGACGATCAGGGTCGGGCGCACCTGTTCCTGCGCCACGTCGAAGGTGCTCCAGTTGCGCACGGCGGCGACGCCGAAGATGACCATCAGGTCGGGACCGTGGGGGCGCAGGTCGGGAATGTCCCAGGCGATGCGCACGTCGCTGAGGACGACGGCGTCGGGACGGTCGGCGACGCGGGCGAGGAAGACGTTGGCGAGGTAGCGGACGCGCCGCTGGTGGTCGTAATTGCAGAGCACCTGGTCGCCCTCCTCGGGGTGCAGCAGGTCGATGAGCCGCAGGGGGACGAGTTCTTCGTCGAAGCAGCCGTCGCCGAGGTCGCGGCGCACGATGCGCCACCCGTAGCGGAACGGGTCATCGGGCGGGGTGTCGGCAGCGGGAGTTGGTCTGGTCGTTGCGGTCGTCATGGTTTCAGTATAGCAGAGATCGAGAGCGTATGGGACACAGACAAGCGTCTGACATTGCGGTGCCGTCCTATGCGTTGTCCGGATCGACCCCCAGCGCGCGCAGATGCGCTTCCAACGCGCGCAACCGGGCTTCCACTTCGGCACGGGCGCGGGCTTCGGCTTCGGCACGGGCTGCTTCACGCTGCGCCTGCGCTTCGGCTTCGGCGCGGGCGCGGGCTTCGGCTTCGGCACGGGCTGCTTCACGCTGCGCCTGCGCTTCAGCTTCAGCAGCGCGCGCTTCGGCATTCATCCATGCCTGCGCTTGCGCTTTGGCTTCCGCCAGCGCTTCGGCGACCCGCTCCTCCGACTCGATCACCTGCGTGACCAGGTCGGCGTAATCTCCCAGTTGTCGTCCCTGTTCGTCGAAGCAGTACACCTCGCCGTCGCGCACCCCGATCCAGACCCGCAGCGGTTCCAGCCACAGCCACCCGCGCGCATCCGGCGTCATCGCGCGGTACGCCGCGCCCGCGCGCTCATACCCCAGCACCCGCACCGTCGGCGTCCCGCGTCGCTCCACGGCGTCCACAATCACATAGTACGGCACGCCCGCCAGGTCGTAGTGGTCAACCTTCTCGTAGAGGTCGAAGCGGCGCGTTTCGGGGGAGGTCACTTCGACGATCAGGGTCGGGCGCACCTGTTCCTGCGCCACGTCGAAGGTGCTCCAGTTGCGCACGGCGGCGACGCCGAAGATGACCATCAGGTCGGGACCGTGGGGGCGCAGGTCGGGAATGTCCCAGGCGATGCGCACATCGCTGAGAACGACGGCGTCGGGACGGTCGGCGACGCGGGCGAGGAAGACGTTGGCGAGGTAGCGGACGCGCCGCTGGTGGTCGTAATTGCAGAGCACCTGGTCGCCCTCCTCGGGGTGCAGCAGGTCGATGAGCCGCAGGGGGACGAGTTCTTCGTCGAAGCAGCCGTCGCCGAGGTCGCGGCGCACGATGCGCCACCCGTAGCGGAACGGGTCATCGGGCGGGGTGTCGGCAGCAGCGGCAGGAGCCGGTTGTGACGCAGCGGTGGTCATAGCGTGCAGTATAGCACGAGAGCGACAGGCGCGCAACGCACGTATGCTCCTCGCCGTGACGCGGGCGTCAATCTGCGCTCTATGTCCGCCGCTGTCAGTGCTGCTCGCCGCGCAGACGACGCAGTTCGGCTTCCAGCGCGCGCAAGCGGGCTTCGGCTTCGGCGCGGGCGCGGGCTTCGGCTTCGGCACGGGCTTCGGCTTCGGCGCGCGCTCGTGCCTCAGCTGCGCGAGCTTCGGCTTCACGACGCGCTTGTTCCTCGGCTTCGGCGCGGGCGCGGGCTTCGGCGGCGGCGCGGGCTTCGGCTGCAGCAGCGCGCGCTTCGGCATTCATCCACGCCTGCGCTTGCGCTTTGGCTTCCGCCAGCGCTTCGGCGACCCGCTCCTCCGACTCGATCACCTGCGTGACCAGGTCGGCGTAATCTCCCAGTTGTCGTCCCTGTTCGTCGAAGCAGTACACCTCGCCGTCGCGCACCCCGATCCAGACCCGCAGCGGTTCCAGCCACAGCCACCCGCGCGCATCCGGCGTCATCGCGCGGTACGCCGCGCCCGCGCGCTCATACCCCAGCACCCGCACCGTCGGCGTCCCGCGTCGCTCCACGGCGTCCACAATCACATAGTACGGCACGCCCGCCAGGTCGTAGTGGTCGACCTTCTCGTAGAGGTCGAAGCGGCGCGTTTCGGGGGAGGTCACTTCGACGATCAGGGTCGGGCGCACCTGTTCCTGCGCCACGTCGAAGGTGCTCCAGTTGCGCACGGCGGCGACGCCGAAGATGACCATCAGGTCGGGACCGTGGGGGCGCAGGTCAGGAATGTCCCAGGCGATGCGCACATCGCTGAGAACGACGGCGTCGGGACGGTCGGCGACGCGGGCAAGGAAGACATTGGCGAGGTAGCGGACGCGCCGCTGGTGGTCGTAATTGCAGAGCACCTGGTCGCCCTCCTCGGGGTGCAGCAGGTCGATGAGCCGCAGGGGGACGAGTTCTTCGTCGAAGCAGCCGTCGCCGAGGTCGCGGCGCACGATGCGCCACCCGTAGCGGAACGGGTCGGCGTCAGCGGCGGTCGCAGGAACTGCTTGTGACGCGGTGGTGGTCATAGCCTATAGTATACCACAGGGGATGCGGCACATCCGCATCCCCTGGGTCTGTCACCGATGTCGAACTGCGTTCTTAATCCTTCGGCATTGCCTTGAGCGCCAGGTACGCCGGGCGTGGACTCCAGTCGCCGTTGATAACGCCATAACTTGCCTGTTCGTGCAGTTCGTTGCCCTGCGCGCGCCAGGGAACGGCGAAATTGAGTTGCCACAGGAACATGCCGGTCATCCAGGGGGCGTAGTTGGTGCGCGCCATCTGGTAGGCGCGCACAATGTACTGCGCCTGCTTCTCGAACGAGATCTGGTTGCCAAAGCCGTACCCCGGCGTATTGTTGCGCGTCGCCCATCCGAATTCCGTTACCCACATTGGCATATCACCCAACCCCGATTGCACCATGATCGCGCGCACATCCTCGACGCGACGGAAGTAGAACTCGCGGCTGTTGGTCCATCCCGGTCCCGGTCCTGGATTATCGGGCCAGAAGGTGTCGGGCGGGTTGGCGGCGCCACCGGGGTGCACGCCAACAATATCGACGTTGGCGCGGAAGCGCGGATCGGCGAACATCTGGCGCAGGAAGACCAGGTCGCTGACTGCGATGGTTGGCGCATTCGTCTCGGTGCTCGACGGCGCTCCCGACACGATGAGCGCCGCCGGATCGTTCGCCTTGATCGCCTGTGACGCCTGCACCAGCATATCCATGTAGAACGATGCATTCGGCACACGTCCGCCGTTTTCGACCGCCAGGTTCTGTTCATTCCAGATCTCATACGCCTGCACTTTGCCGCGATAGCGTTTCGCCATCTCACCCATGAAATAGGCGAATGTGCCGAAATGCTCGCGCGACGGCAGTCCGTTCTTTCCGTTGGGGGTCGCCCAGGATGGTGCAGCGACGACGCTCAAGAGCACCTTTACTCCTTCGCGATGACAGTCTTCCACAATATCGTCGAGTTCGCCCCAGTAGATCGCCCCGGAACGGTCGTGCAGATCCATCCAGCGCACCTGCTGGCGCACCCAACCGAAGCCGCTCTCCTTCACCAGACGCAGAGCGCGTGGGCGATCCTGCCACGATGTCGATCCATGACCATACAGAATGACATTGTAGCCGTAGGCAAATGTGTTCGATGGGGCGGGCGGCGGTTGATCCGGCGCGACGGCGCCAGGGTTGAACGCCGGATTCCCCTGGTGGTGCGCATCGCGGTATTCGTTGCCGAGCAAACCAAGCAGAATGCGATAACGCGGATCGGGTTCGTTGGGGTGCCACTCCATGCGCTGGCGCTCGAAGTATTGCACCCAGTAGACGTTGCCGTCCGCCTGGTTTACTTCCTGGAACTGCTCGGAGAGCGGGCGCCCAAACACTGCAAGACCGCCATTGTTGAGCCAGAAATTGCGGAACGGCGCCGGCGAGTTGCGCAGCGTATGGCGCGTCACGCTGTCCCACGTGCCGTCGCGCGGATCGGGAACCGGCTGGAACGGCGGTTCATTCTCACGCCCCTTGACGATTTCCGTCCCCAGCAGGCGTCCCAGGATATAGTAGGGGGTGCCGTAGTTCTCAGGATGCTCCTCCAGGACTGCCCGCTCAAAGTACTGAACGCGGTAATACTCGCCGGGGTTGGTGAAACTCTCTTCGATGAACGGCGCCGAGATCGGATAGCCGAGCACAAAGAGCGCGTTGGGAGTCCGTTCCCAGAAGGAGAGAAACGAATTGACGGCAGTGTGCCCGGTTTCAGCAAACAAACGCGCCTTGAACGGCGGTTGAGTCGGTGGCACTTCCTCCGGACTGCGCGCTGCCGCCGTTGCGCGCAGCGGCACGATCATGGCGCCAGCAAGCATGATCAGGACGGCCAGTGATAGCCATGGCTTGAAACGCATAGACCTTCTCCATCTATCTCTGCCACCGGTCAGCGATGCGGCGCCTGCTGGTCTTGCATCTTGCGCCGGTTGTTCCTGTGGAGAGGAGCGCGCCGTTCGCCTTTTTCAGGCGTCGCGCCCCTTCTCTCCATTCCGATACATGTTCTCAATCCTTCGGCATCCGTTGCAGGGCAAGGTATGCCGGGCGCGGACTCCAGTCGCCATTAAGGATGCCGAACGATGCCTGTTCGTGGAGCGGGTTGCCTTCGCGCTGCGCCCACGGCACGGCAAAGTTCAGGTTCCACAGGAACATCGCTCCCATCCACGGCGCATATTCGCGCCGCCCGATCTGGAACGCCCGCACGATCCATTCTGCCTGCTGTTCAAACGAAATCTGGTTGCCGAATTCGTACCCCGGCGTATTGTTGCGCGTCGCCCAACCGAACTCCGTGATCCACATCTGTCGGTCGCCGAGACCGTACTGTAACGCCAGCGCCCGGTAATCCTCGACGCGGCGGAAGTAGAACTCGCGACTGGTCACAAAGTTCGGTCCGGGACCGGGACGGTCGGGCCACATGCTGTCGGGCGGGTTCGATGTGCCGCCAGCGTGGACGCCAATCGCATCGACGACGTCGCGGAAGCGCGGGTCGGCGAACATCTGCCGGAAGAACGCCAGATCGCTGATGGCGATATTCGGGTTGTTCGTTTCAGTGGCTGCTGGCGGACCCGATACGACAATCGCGTAGGGGTCATTCGCCTTGATCGCCCGCGCACCGGCGACCAGCACGTCCATGTAGAGCGCCGCCGAAGCGACCCGCCCGCCATTTTCGACCGCCAGGTTCTGTTCGTTCCAGATCTGATACGCGCCGACTCTGCCCCGGTAGCGTTTTGCCATTTCCCCCATAAAATAGGCGAACTGACCAATGTTGGCGCGGTTGGGCAACCCGTTGCGTCCATTGTCGGTTGCCCAACTGGGGGCGGCAACGACGCTGATGAACAGTTTCACGCCCATCTCATTGGCATCGCGCACGATGTCGTCGAGTTCTTCCCAGTAGATCGCACCCGAACGGTCGTGCAGATCCATCCAGCGCACCTGCTGACGCACCCAACCGAAGCCGCTGTTCTTGACCAGTTGCAGCACGCGCTTGCGATCCTGCCAGGGTTCGCGATCCTGGTAGAGATGCGCATTGTAGCCGTAGATGAACGGGCGCGGCAGCGAGCGTGCATCATCGCGGGGCGCGGGGGTGAATGCCGGATTGTTGCGATGATTGGCGTCGCGGTATTCATTGCCGAGCAGACCGAGCAGAATGCGGTAGCGCGGGTCAGGCTCGTCAGGGTGCCACTCCATCCGCTGGCGCTCGAAGTATTGCACCCAGTACGTTTTGCCGTCCGCCTTGTTTACTTCCTGGAACTGTTCGGAGATCGGGCGACCGAAGACCGCCAGCCCGCCATTGTTGAGCCAGAAACTGCGGAATGGCGCCGGCGAGTTGCGCAGCGTATGGCGCGTCACACTATCCCACGTGCCGTCGCGCGGATCGGGAACCGGCTGGAACGGCGGTTCGTTCTCGCGTCCTTTTGCCAGTTGCGTTCCCAGCAATCGCCCCAGAATATAGTAGGGCGTGCCGTAGTTTTGCGGATGCTCCTCGAGGATCGCGCGCTCGAAGTACTGGACGCGGTAATACTCGCCAGGATTGGTGAAACTTTCCTCAATAAAGGGTCGAGAGATCGGATAGCCCAGCACAAAGAGCGCGTTGGGCGTATTCCGCCAGAAGCGCTCGAACGAATTGACGGCGGAGTGACCGGTCTGCGGATAGTACTGGGCGAGATAGGGCGGATAGGTGTCGGGGACTTCAGCCGGGCTGCGCGCTGCGGCGCGACTCTGGCGGGGTGCGACGACGATGCCGACGATGATGGCGATCAGCGTCAACAGCGACAGGAGACGGGGGATAGCGGTCTTCATTTGCTGGAACATGGCTCTCCTCTACACTCGATCACACGATTTCAACCGGTCGCTATCCGCAAGTATAGCGGGAGCGACTGATGGGTTCCTGACACACACCTGAAGGGGAAATTACCGATCCATGACTCTCGACGGCAACGTTCCTCAGCGGGGCAATTCTTCCAGCGTGATCCGTATTGTCTGTATGGCGTTGTCACGCCAGATCTCGATCTCGACCTCTTCGCCAACCTGATGTCGCGCCAGCACACGCAGCAACGGATGGGCTTCATCGATGCGCTGACCGCCGAGTGATAACAGGATATCACCCGGTTGCACACCAGCCTGCGCCAGCGCCGATCCACGCCTGACCGCCTGAATAAAGAGACCGTAATCGACCGGCAGGTTGTACCACGCCGCCAGACGCGGCGTAATCGGTACGAATTCGATCGGCAGGTATGGACGTGCCACCCTGCCGCGTGTTATCAGTTGATCGGCGACATAGCGCACGGTGTTACTGGGAATGGCGAACCCGATCCCTTCCGCCTGTTCGGCGCCGCCGCGTATGATCGCCGTATTGATCCCGATCACCTCGCCATCCAGGTTCAACAATGGACCGCCAGAGTTACCGCGGTTGATAGTTGCATCCGTCTGGATCAGGTCGTCCAGTACGACGTCGCGGGTTTGCAGCGACCGTCCAAGCCCGCTGACCACACCGACCGTTACCGAGTTGCGCAGGTCGCCCAGGGCGCTGCCGATGGCAACCACCCAATCGCCTGCCTGGACTGCGTCAGAGTCGCCCAACCGGGCTGCGGGATAGGTATCGCCTTCGATCTTGATCAGCGCCAGATCGCTGAACGGGTAGTCGCTCCCGATCAATTGCGCCGGGCGCTGTCGTCCGTCGGCAAGAATGACGTACAACTGCCGCGCGCCTTCAACCACGTGGTGGTTGGTGATAATGTACCCGCGCGGATCGATAATCACTCCTGAACCACGCGCTGGCGGCGGTTGGAATGTGCCGAAGAAACCGACCTGCGGCGGCAACTGCGACACCACCGTCACCACCGATGGTCCTGCCTCGCGCGCGATACGCGCCGGCGCCGTGCGCACCGGATCGTCCGTGGCGACGACCAGCGGTGTTGGAGATGGGAGAAGGGTGGAGGGGAGCGTGGCTGGTACGGTCGTCTGCGCTGTTTGATCGGCAATCGGGCGCGCAACAAAGAACCAGATCAACGCACCGCCGACAAGTGTGCCGACAACGCCGCTCACCAGGCTCAATCCGCCAAGGAGCGCATAGATCACACAGGGGGAACGTTTCTCGCCGGAGCGGTTTTCCAT

Protein sequences of DBSCAN-SWA_3

>NC_009523|4584386:4650453|4608276_4609533_-|WP_011958377.1|DBSCAN-SWA
MTPPPATSTGWRPFIAAVIVAVATVAICYIAVPSNLAAAPSAQTGTLSMEISKRLQGSDVIQVGQELTFTIRITNTGTISITTLPLIDEYESSILQLERTIPLSSTNIVTPATGGGLITWSDLTTDTVFGPLNPGQSIEIITVFRAIAPRVATVNRARIGAAVGFGGQEYAGDERSSTGDAIGGQVIVRKELVTDTVAASGLPLTFTITISNDGAADLTRIPLRDTFDLTYLQFASAIPTPTLTSTATITEGVLEWDNVLTGLGLTRLRPGEIITVTTVFTALRSVEAAFINRAEASGVRDEFDDEVQAPRQAEVPIRIIPGPAEATPTSTPTPSPVPREEPQPRDTPVPATPTQTPSPTVETTATPTPEAAGIAATPTVAAPATLPRTGGSDHLTWTVIAALLLAGAALALRFRPGL
>NC_009523|4584386:4650453|4610414_4611407_-|WP_011958379.1|DBSCAN-SWA
MISVIIVTWNGRRFLDACLRAVTAQLHPDDEIIVVDNGSIDGTAVWLRHAWSAVRLVALPANLGFAGGVNAGLRAARGDLLLLLNNDAFVEPGCVPALVEALRDHPCSGAVAGVLTFDHRPDLVASAGITACRNGLALDLWTGRAVRSLPAAPQPVMGASGGLALYRRTMLDDIGLMAPDFFNYLEDVDLAWRAQLRGWECLVVPAARARHIYSATGGQGSPLKQRLLGRNRLRAIIRCFPSGVLRSCLPDILAYDTLALAYAALARQPAMIAGRIEALHDRAQLLRERRAIQARRTVSEEAFAAWLEPSPTPWRTLRTARRLDALLRDR
>NC_009523|4584386:4650453|4620590_4622093_-|WP_083763379.1|DBSCAN-SWA
MRERARQGGGPERIARHHARGKLTARERLDLLLDPGSFQELEPYTTGRPVDGETFYGDGVVTGAGRIDGRTVFVYSQDFTVLGGSLGEAQARKICRVMDLAFSEGAPIIGLIDSGGARIQEGVHSLGGYGEIFRRNTRCSGVVPQISVMLGPCAGGAAYSPAVTDLIIMVERRSFMFITGPDVIKEVTGEIIDLEGLGGANVHMTISGTCHLTAPDDQTALALCRRALSYLPSNNTENPPVLPNDDDPLRADEELNRIIPLDPGRAYRMHDVIERVVDRGSWLELQPMWAMNAITGWARMGGRSVGIVAQEPGVMAGVIDIDASDKIARFVRTCDCFNIPLVTFVDSPGFLPGIDQEHRGIIRHGAKVLYAYAEATVPKISIVTRKAYGGAYIVMSSKPLGGDINFAWPSAEVAVMGADGAVNLLYRDQIARAPDPAAERARLAREYERKFNNPYHAAAAGFFDDVIEPRETRARVIAALDALRNKSVAPPPRRHGNMPV
>NC_009523|4584386:4650453|4643247_4644240_-|WP_011958406.1|DBSCAN-SWA
MTTAASQPAPAAAADTPPDDPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTPTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAEAEAQAQREAARAEAEARARAEAEAQAQREAARAEAEARARAEVEARLRALEAHLRALGVDPDNA
>NC_009523|4584386:4650453|4641232_4642195_+|WP_157041161.1|DBSCAN-SWA
MDRDMYASALERAVIADERTAGRIFMRGRDRAALLHRLSTNDIERLKPGEGTLTVLTTPIGRIIDLLTVHALNDALLIVTSPDQGPPVFGHLRRNIFFNDQVTLDAAGRTHAQLALYGPQAARLIAELTGAAIDLPLHGITTTAIAGVSLLIARRKPIGGDSFTLYVPSDGYDAVQAALLAAGATPIDGDTLDVLRIERGYGAFGRELSQEYIPLETGLLDAVSFSKGCYVGQEIIARMESRGRLAKRLCGLQLSQPVASPAKLVCDGRDAGDLTSAAVSPRFGPIALAYVRTVYAEPGTVVGVEGTGVTGRVVELPFAA
>NC_009523|4584386:4650453|4613107_4613899_-|WP_041334117.1|tRNA|DBSCAN-SWA
MRFDVLTLFPGMFAGPLNESILKRAIQAGVINVVLHDIRAYATDRHRTTDDAPYGGGAGMVMKPEPLAACIRAVLSMAPETEESPKPPVILMTPDGEPFTQRIAAELATYPRLVLVCGRYEGVDERVREALIDREISIGDYVLTGGELAAMVIIDAVARLVPGVIDAESIADESFSDGLLEYPQYTRPAVWEGRAVPPVLVSGHHGEVAQWRRRERLRRTLERRPDLLARAALTETDRAYLRTLGWNDPTVGEGAEHSAATKS
>NC_009523|4584386:4650453|4619649_4620108_-|WP_157041384.1|DBSCAN-SWA
MKVRVVIEGTAYDVEIVDLSARPVIAIVEGERFEVWPEASPVLAIGSLDGGRLPPSVPPPAPVTSTPTPASMPARSGSPESGAVLAPIPGIIVAVKVQPGDRVTAGQEVCVLEAMKMQNSIRAKQSGVVAMVHVKAGDQVKHHQALLVITPD
>NC_009523|4584386:4650453|4607275_4607632_-|WP_011958375.1|DBSCAN-SWA
MLIDYLPILTLFLVAMFIAVFVIVLSRYLGPQRPNRRKLMPYESGMEPIGPAQRRFPIKFNLVAMLFILFDIEIIFLFPYALVYRQLGIPGLAAMGVFFVVLVIGLIYEWRRGALRWE
>NC_009523|4584386:4650453|4589321_4590395_-|WP_011958362.1|DBSCAN-SWA
MTDKTRKLQSLLTAQVGKGGLHNIVAAVQSFDRRLDFVGAAGVADPGSGAMMQPDTPYFIASITKMYTAAIIMQLYEQQRLDLAAPVSDYLPADLLDGIHNYKGADYSRQIKVFQLVNQTSGLADFETDKPRGGKSVLEELIAGHDRAIDTAEALTITRRLAPHFPPGTPGKAYYSNLNYRLLGEIIEALTGKPMTVNFEERICAPLGLQHTYLYDWTKPRPGKPPATLYLNNAPVNVTKYLSSNVSDGGLVSTAAECMTFLRAFFEGRLFDQTLLQRMTQWNALFFPLRYGYGLMYYQLPRYFWITPLPEFVGHSGSTGSFAFACPSRSLYITGTLNVIAPARPFFFMMDLVRTAR
>NC_009523|4584386:4650453|4601606_4604396_-|WP_011958370.1|DBSCAN-SWA
MSDHSLDQLAAMSPLEVCAALQTAPHGIDEAEARKRRERYGPNAIADTLPVSTFRRLATSFVNWISLILLIAGLLAFLSDTPVIGWVILVVALLNGIFTAWQEYLAERAIAALRQLLPATAYVRRAGQVRQIPTTDVVPGDILPLKPGTVVVADGYLISSEGLRVKQTALTGNAAPVTKVAGAMPDPTLALVERPNILLAGTVVFEGQGSLVAIHTGMQTLLGTIAESTAALRAEPSPLGQALNTLAATITRVAIVAGLGAFLLTVFGQQFTIQAGIIFAIGMIVAFVPEGLLPTVTLALALARRRLARYGVLVRRLAGVESLSSATVLCADRVETLTSTTLTVSAIWAGGRVYTTTGSDYRPEGAFLYERALVRVASEPDLTAVLRAAVLCNNSRLMPPDASHPDWYIVGDPLEGALLATAARGGIDEASLGHRIVRLQSFPYEPRRQLGSVVVAIERDGKRELSAYVRGTGRAVLSICVRIQYHGVVRDLDDAMRQEIEDAIDEYARKGQRVVAFATRSVEEPLEGIMWRARDIEHDLTFLGFATLQEPPQPEVVQLIEGCRKAGIRVIIVTGAYGLTAEAIARRVGLIDAPHVQIVTGADLDAMSSANLGLILAPLEDVIFAQLDATHKRRIVEALQQRGEIVAFLGDSINDAPALRQAEIGVVVSASGTAVALAAADIVLNAQHPAGLLLAIEEGRAIFANIQKLAAYIFAHNVAEAAVIVVSVIIGAPLPLTVLQVLAIDVGTELLPSVALSTEPPEPGILEQPPRPRTAPLLDRETLLRTFAMLGMLEGALALLAFFTVYWSAGWRPGMPMESSGEIYAQATTLTYMAIVMAQVGVAFASRTRRSSVFRIGLFTNRALVVGTLLSVVLMLALVYIEPLATLFNFVPPQPEHWVMLACFPVIMLFADEIFKWWRRRYQAVQFAF
>NC_009523|4584386:4650453|4618503_4619634_-|WP_011958389.1|DBSCAN-SWA
MDFSTLIPELTKGLANFTPGNLVMIAVAATLIALAVVKQYEPVLLLPIGFGCLVANIPLTGMTDGEGLFGILYRAGISTELFPLLIFVGVGAMIDFSPLLAMPRMALLGAAGQFGIFGTLILAMLLGFPLNQAASIGVIGAIDGPTSIYVASQLAPELLAPIAVAAYSYMSLVPIIQPPLMRLLTSRRERIIRMAYAPRPVSRRALVLFPIVVTLTIGMLVPAATPLISMLMLGNLLRESGVVDRLSKAAQNEIINIATLFLGLTIGSTMSADSFLNLVTLQVLGLGLLAFILDTVAGLLFGKFLALVSGGAINPLIGAAGISAFPMAGRLAAKVALDEDADNFILMHAMGANTAGQLGSVVAGGVLLALVTGVLG
>NC_009523|4584386:4650453|4616028_4616853_-|WP_011958387.1|transposase|DBSCAN-SWA
MPRRALRSYPTKDATDLTDAQWAAIAPLVVTPSPNGGRPTDIDRRAIVNALLYKHRTGCQWRMLPTDVPPMSSVRYYFDKWNRDGTFVKMNDMLRKLARQALDRDPEPSISVLDSQSVKTTEAGGERGYDGEKKVNGRKRQCWVDTKGFLLRVLVHPADISDTEGAEWLLAAHHQSFPRMQEIRVDEGYKQGLNEWMQQNTTIRLNVIEKPPGQKGFAVIPKRWVVERSIAWAGRNRWERRIIIRRNNRNPESSEAFLYLGSIAMLLNRLYPRC
>NC_009523|4584386:4650453|4623294_4623819_-|WP_011958394.1|DBSCAN-SWA
MTLEQNRARVVAAVWQAIAQSGVDLSSVPRDQQDRLVAAIADTLLPTVNQMLDEVAPRVSAEVSGEERVLWEGRPFLSITERYVLTTERVRIYRGLIGRNIDDIELVRLQDIDFTQNAGERIFGIGDIHLRGADPSTPEVTLRNVHQPEEVRELIRRAWLDARKRYGVSFREQM
>NC_009523|4584386:4650453|4609566_4610337_-|WP_011958378.1|DBSCAN-SWA
MNPFRVFWQSARDTFEDLLPLTLISVVWLLVTLPLPILAAGFAVGGAPFGAAALLLLTTLPMGMASAGLTVIAQRIHEGRTVSLSDFIAGARRHYRFGWQIYGAWLAGLLIILVNVVFYAQIDAPPGIYLMMLFAYFLAAWVSLLIYLGPLALLQERQSLLLAFRNALVLAFGRPLFTIVTQALMSVIVFLATLPPFFLLLLIAPALLAVWGFRATVALIADAEARREAQQERERAAITNPPATEKGRGGQVRPRE
>NC_009523|4584386:4650453|4593364_4593517_-|WP_157041158.1|DBSCAN-SWA
MRAYDSEFAMNRTQLNISRFIIDTLPVKMATLLFVSGDESVVTAGDHARA
>NC_009523|4584386:4650453|4633731_4635744_-|WP_011958401.1|DBSCAN-SWA
MSFRIEAPFQPAGDQPKAIAQLVAGIRAGYKHQTLLGATGTGKTLTMAHVFSQLERPALVMAHNKTLVSQLYAEFRELLPDAAVEMFISYYDIYTPEAYVPSKDLYIEKEAEINEEIDRLRHAATQALFTRRDVLIVASVSAIYGLGSPHEYGQVVIPIRVGEVRNRDKLLRQLLDLQFERNDVDFHRGTFRVRGDTLDIFPANQEIALRVEFWGDEVERITEFDPLTGEVLLNRTAVDIYPAKHFITTAETLKLAIADIQAELEARVAELEQQGKFLEAARLKQRTNYDLEMLSEVGYCSGIENYSRHLDRRAAGQTPWTLLDYFPDDFILFVDESHITLPQIRGMYAGDRSRKETLVEYGFRLPSALDNRPLRFDEFERHIHQAIYVSATPGPYEYEHSAQIVEQIIRPTGLLDPIVEVRPTRGQIDDLVGEIKRRVQKGQRALVTTLTKRMAEDLADYLKEMGIRTSYLHSDIETLERVEILRDLRLGVYDVVVGINLLREGLDLPEVSLVAILDADKEGYLRSGSSLIQIIGRAARHIEGTVIMYADTITQSMRTAIDETNRRRAIQEAYNREHNITPVGISKAVRDLTDRVRKVAEERGVYQVAEAPAELPIPKDEIVKLIKELEKQMKQAAKDLAFEKAAALRDQIVELRRTLALEEESQPLRS
>NC_009523|4584386:4650453|4606218_4606743_-|WP_011958373.1|DBSCAN-SWA
MALDNATVLERLRAALPDAILGSAEFRGDLSVYVRPERIVDVARFLRDDPELRFNFLENLCGVDYLGREPRFEVVYHLISFTNRSRICLKVGVDEHNPSVPSLTGLWPGANYHERETFDMFGIIFTGHPCLERILMPEDWEGHPLRKDVPLGAEEVAFTFNQDRIYAHKPFAKE
>NC_009523|4584386:4650453|4647345_4649151_-|WP_011958409.1|DBSCAN-SWA
MFQQMKTAIPRLLSLLTLIAIIVGIVVAPRQSRAAARSPAEVPDTYPPYLAQYYPQTGHSAVNSFERFWRNTPNALFVLGYPISRPFIEESFTNPGEYYRVQYFERAILEEHPQNYGTPYYILGRLLGTQLAKGRENEPPFQPVPDPRDGTWDSVTRHTLRNSPAPFRSFWLNNGGLAVFGRPISEQFQEVNKADGKTYWVQYFERQRMEWHPDEPDPRYRILLGLLGNEYRDANHRNNPAFTPAPRDDARSLPRPFIYGYNAHLYQDREPWQDRKRVLQLVKNSGFGWVRQQVRWMDLHDRSGAIYWEELDDIVRDANEMGVKLFISVVAAPSWATDNGRNGLPNRANIGQFAYFMGEMAKRYRGRVGAYQIWNEQNLAVENGGRVASAALYMDVLVAGARAIKANDPYAIVVSGPPAATETNNPNIAISDLAFFRQMFADPRFRDVVDAIGVHAGGTSNPPDSMWPDRPGPGPNFVTSREFYFRRVEDYRALALQYGLGDRQMWITEFGWATRNNTPGYEFGNQISFEQQAEWIVRAFQIGRREYAPWMGAMFLWNLNFAVPWAQREGNPLHEQASFGILNGDWSPRPAYLALQRMPKD
>NC_009523|4584386:4650453|4599417_4600932_+|WP_011958368.1|DBSCAN-SWA
MSERDFINPFSDYGHIVHGDRFIDRCSSIRAVENRVIRPKEPGNLAIIGDYRIGKSSLAYQSIMERKNDLLKERRLPVWINLATFDQPSLFFRALVTSSYDELDNLGWLSNDIKNAAARALQDEVSWSEGYGRIQRYFEKVRRSGIRILFILDEFDHARKLFKGDVSGFQGLRELSYRPEWRVTFVTTSRRSLQSIELQTAAISTLDHTFHKHYLGMFDEDALEEYFKRLSSIGITITPQVRERLFFYCDGHPYLLEMLGYEVVELFRETGIVDVDQATKDVGQSFIDHYEHTLEVLKEDEKLNKMLQILFGPVIDAKLTDAEELQRYGLIKLNDEDVYVAFSEHFQTYLRIIERYVDLWPLWRETEMALRRVITEKMIEHYGEQWIERLCKEKPKIRTIFEKSEEAQKQEERSFGDRASRNLVDFMYPRGLFDIIFAEWSVFRDVFGKDKNYWDQRAQLLSKVRNPLAHNRDMALYDYERRIAEGYCGEILTALEKYRSASNA
>NC_009523|4584386:4650453|4615611_4615950_-|WP_157041159.1|DBSCAN-SWA
MRNYRAYTEDVLQAMERIETFVHGMTFDDFLADDKTTSAVVRQLEIVGEAARFIPDDLRRRHPEIPWREMAGMRDRLIHGFFGVDYQLVWRTIKERIPAVKPILKEILESQP
>NC_009523|4584386:4650453|4607747_4608275_-|WP_011958376.1|DBSCAN-SWA
MNHPCTITATIAPCRFGYFLVAATAHGVCAVTLGDDPDMLQDDLERRFGTAIIRHTGHVSNNLTDTIHSYLNGVQKRLDLPLDVMATPFQRLVWEALRAIPYGATQTYQEVAQRLGRPYAVRAVARACASNPVALIVPCHRVVRADGALGGYRWGIERKRALLAHEAAHIQLCAS
>NC_009523|4584386:4650453|4645406_4647200_-|WP_011958408.1|DBSCAN-SWA
MRFKPWLSLAVLIMLAGAMIVPLRATAAARSPEEVPPTQPPFKARLFAETGHTAVNSFLSFWERTPNALFVLGYPISAPFIEESFTNPGEYYRVQYFERAVLEEHPENYGTPYYILGRLLGTEIVKGRENEPPFQPVPDPRDGTWDSVTRHTLRNSPAPFRNFWLNNGGLAVFGRPLSEQFQEVNQADGNVYWVQYFERQRMEWHPNEPDPRYRILLGLLGNEYRDAHHQGNPAFNPGAVAPDQPPPAPSNTFAYGYNVILYGHGSTSWQDRPRALRLVKESGFGWVRQQVRWMDLHDRSGAIYWGELDDIVEDCHREGVKVLLSVVAAPSWATPNGKNGLPSREHFGTFAYFMGEMAKRYRGKVQAYEIWNEQNLAVENGGRVPNASFYMDMLVQASQAIKANDPAALIVSGAPSSTETNAPTIAVSDLVFLRQMFADPRFRANVDIVGVHPGGAANPPDTFWPDNPGPGPGWTNSREFYFRRVEDVRAIMVQSGLGDMPMWVTEFGWATRNNTPGYGFGNQISFEKQAQYIVRAYQMARTNYAPWMTGMFLWQLNFAVPWRAQGNELHEQASYGVINGDWSPRPAYLALKAMPKD
>NC_009523|4584386:4650453|4604415_4604940_-|WP_011958371.1|DBSCAN-SWA
MSLIEKHGAEIEAIIARYPHKPSAVLPLLFIAQDEYGYLTEAAMREVAELLDMPPTDVFEVAGFYSLLYEQPVGKWVLQVCDDVPCAFCGAEDLIATLQAKLGIGVDQTTPDGMFTLQRVKCLADCDHAPVLQANLEYYHDLTTPEKVEQVLAMLRQRAESGEQLSISGRYADR
>NC_009523|4584386:4650453|4601142_4601589_-|WP_011958369.1|DBSCAN-SWA
MTDQRSAPVRILVCISEEAQSQAVIRYAARVGVELGAELLALHVEPPGAATRRPARAAQQLERNLRLARDLGAHVTVIDSHRVVDSILRYAHEHGVQRIIVGKPRPRTWRHWISGDIVTRLLRDTDIPIEVAPLSSGAPRETKRGEEA
>NC_009523|4584386:4650453|4604958_4606212_-|WP_011958372.1|DBSCAN-SWA
MTVAEIRARNLSIPAPSQITRPALAGEKETMVLNMGPHHPSTHGVLRLVVELDGETVVDVAPDIGFLHTGIEKTMESKTYQKAVVLTDRTDYLAPLSNNLSYVLAVEKLLGCEVPERATVARVLLVELQRIASHLVWLGTHALDLAAMSVFLYGFREREQILDIFELVSGARMMTSYFRVGGLAYDLPAGFDAAVEAFLQIMPGRIDEYEALLTDNPLWIERTQGIGAIDSEAAIALGLTGPGLRATGVAWDLRKTMPYCGYETYSFAIPTATHGDIYDRYLVRMAEMRESVSICRQALQRLRDIGPGPYMTSDRKIAPPPKSEITQSMEALIHHFKLWTEGFKPPRGDALAAVESPRGELATYIVSDGSAKPYRVHFRAPSFVNLQSLPHMARGHLVADLVALIASLDPVLGEVDR
>NC_009523|4584386:4650453|4649283_4650453_-|WP_011958410.1|protease|DBSCAN-SWA
MENRSGEKRSPCVIYALLGGLSLVSGVVGTLVGGALIWFFVARPIADQTAQTTVPATLPSTLLPSPTPLVVATDDPVRTAPARIAREAGPSVVTVVSQLPPQVGFFGTFQPPPARGSGVIIDPRGYIITNHHVVEGARQLYVILADGRQRPAQLIGSDYPFSDLALIKIEGDTYPAARLGDSDAVQAGDWVVAIGSALGDLRNSVTVGVVSGLGRSLQTRDVVLDDLIQTDATINRGNSGGPLLNLDGEVIGINTAIIRGGAEQAEGIGFAIPSNTVRYVADQLITRGRVARPYLPIEFVPITPRLAAWYNLPVDYGLFIQAVRRGSALAQAGVQPGDILLSLGGQRIDEAHPLLRVLARHQVGEEVEIEIWRDNAIQTIRITLEELPR
>NC_009523|4584386:4650453|4616889_4617831_-|WP_011958388.1|DBSCAN-SWA
MIPHKPGLSCHLTHKANLRQTRYGWLRLTPAYSVHLVQEILSHIAPQDAIVLDPFCGTGTTALVCAEKGITVDTTDINPFLLWLTKVKTAPYSSEDIAELQSAAQIISESITLSNSAGVWIPPIHQIERWWDSDVLQIIGNMMGMINKMGEIYPEKVIDLLKIAFCRVIITHSSASFDHQSMSFKQKINAPLFYDVADEVRATWEVAVSEIVSSARSDIRATPGIFLCDARDLSALLPHHYYTCVITSPPYPNRMSYIRELRPYMYWLSYLRDGREAGELDWKAIGGTWGIATSRVGKWSPSEGDQKTGFVVS
>NC_009523|4584386:4650453|4625093_4626347_-|WP_011958396.1|DBSCAN-SWA
MRVVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKFRIIDFTLSNCVNSGIFDVAVLTQYRPHSLNAHIGNGKPWDLDRANGGVQLLQPYQGRRDESWYKGTADAVYQNLNYIHERRADLVLILSGDHIYKMNYAEMIEFHQQKRADMTVAVMHVPLEETDRFGIMTVDENQRVIEFTEKPKNRDKGTLASMGIYLFNVDTLVKRLSENGEGSPRIDFGKHVIPAMIGRDAVYAFPFQGYWVDVGTIQSYWETSMDLLNPNNTLNLYDTEWVIHTRSEERPPAKMGPQARVSRSLICNGCIIRGTVEHSVLSPGVYVSPGAVVRDSVVMNDTWIGPGAVLDRVIVDKNVVVGAGVRLGCGDDFTTPNREQPDKLMTGITIVGKGAHIPPHIRIGRNVIINADREEEDFPAGDVKSGETI
>NC_009523|4584386:4650453|4584386_4585046_+|WP_011958359.1|protease|DBSCAN-SWA
MGIWQTNHRIDWTSPRVDALIPMVVESTNRGERAYDIYSRLLKERVILLGTPIDDQIANLIVAQLLFLEHEDPDRDIWLYINSPGGSITAGLAIYDTMQVIRPDVATVCVGMAGSMATPILAGGAKGKRYSLPHSTIHMHPAGGGARGYAPDVEIMARELLREQQLIRELLAKDTGQPLERIARDFDRDLFMDPQQAKEYGIIDEILTREDLPAAGERR
>NC_009523|4584386:4650453|4620107_4620452_-|WP_011958391.1|DBSCAN-SWA
MIDNLNVALQILALGMSITFGALFLLWGLMALLTFLTSGGAGEETTAAPSVEAGVSLPDQEAMRERRRRAAAAAVAVALAREQMVRSSVSPTSAVSPWQAATRMVRFGRPGREP
>NC_009523|4584386:4650453|4614036_4614534_+|WP_041334119.1|DBSCAN-SWA
MTRFDEFLKANETFAASFTKGDLPMPPARKVAIVACMDARLHPEKVLGIDIGDAHVIRNAGGRAQDALRSLVISQRLLGTREIVVLHHTDCGMLTFTNEQLAAKIQADLGVDVKGQDFLPFADLEQSVRDDVAFLRDSPLIPKDIPISGAIYDVRTGRVHAVVRA
>NC_009523|4584386:4650453|4612004_4612451_-|WP_011958381.1|DBSCAN-SWA
MPRRRHVSASRNLTLRERLNPGRAGVHALTLAMVVLSLWMMASFVGQIMTGAQLEQRREALLAENARIEATNRALLSQVEYAESPAYAEQIAREQLGLAAEGDTVVLPTFEDRPANQATPTPAPLPAPAPQLNWRAWIQALSAVPGAP
>NC_009523|4584386:4650453|4612541_4612973_-|WP_011958382.1|DBSCAN-SWA
MFGNRKQSQALPAANLNGKPETVIGANTSIVGTLKSDGNIRIDGRVEGDIEILGNLIIGETGQVIATIKAQNVHVSGAVKGEITAIEQLEISPTGKVWGDITTSALHIEPGGLFRGQSSMTTNIDEPLLLEAPRPDRRDEHKA
>NC_009523|4584386:4650453|4637359_4640617_+|WP_011958402.1|DBSCAN-SWA
MTPAERRAFERQLQQEFPGLELHAWYRQYRSLKAAHPDAILLYRLGDFYETFDDDAKLVADLLEVTLTYKEFASQKGRDQKQRCPMAGIPYHAVEGYVARLVGAGYRVAIAEQITETPSSRTDTRPRSIFAAGIEQTSLTGSNRMVERKVVRVITPGTIIESGMIPAERNNYLAALIADHGRIGLAYADLSTGEFAAVEFSGERAAQQAQGELTRLNAAEILVPDRADLRLPGLEPSSARLEQDLEFLTREERELLLPGERVARRVERENNARWAHGRVTAWPERRWDLRNAHDTLLHQFGVRSLAGFGLEDRPLAIRAAGAIVQYARETQQGVVANLRSIRAYTPGDAMFLDPQTQRNLELLEGASGTTRGSLIGVLDQTRTPMGARLLRRWVSQPLCDLTRLHARHDAVERFVTDAILRASVRETLRRVGDMERVVNRIIQGVGVATPRDMARLRDALRALPELVAALGDWTPPPGEIDLTGVRTLPPSAATDPVSLTENGNERIEPNQTSAVSLRAQREARRRVSARYADEDLFGEEEQNAPPVGSSNHAVGTQPSADDEASPVTAFVDDQATETLALDPCADMLAFLETAIDDEPPALLGASNYLRAGENGEPPRRVIRPGFEPEIDQVVAASRDAQRWISELEPKERERTGIKSLRVDYNRVFGYYIEVPKTYADQVPKHYIRKQTLTTGERYFTDELKRYEEIVEQAQQRLIDLERRAFARICDVVTGAGARLLRTARMIATIDVFAALAEAAVRGRYVRPELYDDTRLRIVGGRHPVVEQTLDETFVPNDIEMDTETRQICLITGPNMSGKSTVLRQVALIALMAQIGSFVPADAAEIGLVDRIFTRIGAQDDIATGRSTFMVEMTETAALLAQSTRRSLIILDEVGRGTSTYDGMAIAQAVIEYIHNEPRLGCRTLFATHYHELTDLERTLPRLKNYHMAATEQDGRVVFLHELRPGGADRSYGIHVAELAGIPQSVIRRASELLAELERRAPRSAPPTVPARGDDRRSAGRASSSGAGAARGEQGRTLPDGQLSLFDLAPGPVIEMLRRIDINQLTPLEALNKLHELQKLARAGGG
>NC_009523|4584386:4650453|4623837_4625085_-|WP_011958395.1|DBSCAN-SWA
MLRTYAMILAGGESPALSVLTAERSEAAVPFAGKYRIIDFTLSNCVNSGIYNVGVLTQYRPRSLHEHIGVGKPWDLDRRIGGVRVLHPYLTSEGGAWQRGNADALRANLDIIAEQKVDAVLVLAGDHVYKMDYRPMLQLHEDLDADLTLAVHSVSPHEAHRYGIVSVDADGIVTQFEEKPRRPRSSLASMGIYVFRKNFLMEVLASGDEQNIGRDLMPKLVHQTSVVSYHFQGYWADVGTVQAYYEANMALLVETPALDLHDPEWVIHTKSEERPAAEIGENARVDGNLLCDGCRIYGTVARSIIAPGVVVAEGATVRDSILLSGAVVEAGAVVDRCIVDKEVVIGSNTIVGDGEDNTPNQRAPELLNTGLTLVGRSAQIPANVRIGRNVVIRPRVTAASFGGQTVVSSGATINR
>NC_009523|4584386:4650453|4594742_4599410_+|WP_011958367.1|DBSCAN-SWA
MLSQIIQRQIPIGSTVIFSLKDGQDVSGILVEIGRDHVTLENAGYSVTILLEMIGTWRVSRSLEPLEHTPMPEPSSASPPPLSPPDLADQETIKRLLEIEARFQVRQQVSFIQIKVPDFVFPANEMQGKQSANALTIWNRVKNKYEYAEKINELSAKFGRIQSLVGELASLSEQFPRSSSVKRHLAYFYHLAGDNQKSLALYQESASISNNALDWYNLAAKALAKGDEALACYCFGNFFKVNPITDELDTWYIYAGLIRKFSDYQTIKEIARKRVKIASKDEIVLLLETGIYLLTATGRGQIATNTVQRWIKDHALEDLVIEVFDHFQEQKDAAYHERVSGFLEEKSPESVQMSLDNPQGFIFSYRRDRNFGFLEGKDGRNYFFHITAVSDDDLLAQLRDFTSGKRIPVIFESSEGQKGPIAVRVALYRTLEEMFAKAVEYANDGDYSKAIAFVKKVLDARPNFPSAQDSYEKWREYARVSGIPKGSNPYARAKRVQLVEKDLERAAQLLRDAIRQGDNVESAVKDLAALLVQLGRPDEAIQVLEKNRSRISNQQSVDNMLINFYQNAGQHDKAISLLHKQLQQANTETKKAQILWQIAIGYLRKEDYVRAEQTFQELRRAQPDNKSIQRNIALCLFKQERYEEARKILDGILLTTPDPQAAELLEAIRQAQVGQVISINEIIVETALSDIPREISGFARFYLDRCDYQGVRADHIQTKSFDRSDISTLEQLATRSRTIRPRERASYYLSAAKITSLLEDEDPNQFYKYLCRSFASSGDAIVVENRPLDAAREYYCEALSVYDGDRSRSRDEQDAVNALVRFLFSTMGQSQIPIKPSIPTIDETLEFVLTRHPDRNKAFDAIAYLVFRSRYAANRLLNRIYDKSSLQAMALEYLKSAGVSIGIVKRFDDFFRLWNGLVRKILDENRSLLNEFRILNRVELTTASLEHGVERIKKITGRLFFELDRQRVIQIQKVLETALELCNQNAFEEKERLCIQIENRCQDLLNEIEISPTKISVEDMYPLVKGIQSKINAYLTQLYETSTPQLTIRLPLETYMPGNNRLIEAQVGISNRVGCSPAEAVELVIQQYEETSAIRLEGSLRGGEQRILKVPVQLSEEALSAQAFSLPIYARYRTRSGETQQTPVNNFSIRLSAEFEEIENPYTPYAEGGIVGESAMFYGRDELIANVSNALDTSRAQSKCVVIYGQKRAGKSSILYHLQEKLKLKEDLLVVNIGNIGGILDEFSRIPFLYHILWTILSKLRDSLEDKLSEGRSSPDVSFPSGMEFYQHQSPLLLFRETFDRFHRSIEKLPDWRGTRVILLIDEFSYIYGYILKGMIPETFMKNWKAMLQDNFFNAVLVGQDVMPKFKQRFPNEFGTTQDERVTYLRREDAIRLIDEPIRIGGRHGESRYRERAIERILELTAGSPFYIQILCNRLVEYMNRKRASLVTEADVEQVKDELIRGVNALGKDKFDNLINSGDTSQDAISDEDALKVLTAIAENSRTGPCSRSSIACETSIPVDEILEDLVRRDVIERERGHYYSIRVGLFREWLLAHS
>NC_009523|4584386:4650453|4611488_4611947_+|WP_011958380.1|DBSCAN-SWA
MNVVHDNRRSVVVGIGLILLGFIWWLNLWWLLPPGALIAGGVAAYIQRRALRTSEAVQVGLWGVGLGLLLLVDFLFPGILFLAGVSLLIRGREVGIDAQIQHSISSLRRPRQNTPPASSTSVPITIHSGAAPQAPVTSPDHAATGETTRLRE
>NC_009523|4584386:4650453|4606781_4607285_-|WP_011958374.1|DBSCAN-SWA
MGIEQKAGDMGIVTASLEQLVNWSRSSAMWPLLFGLACCAIEMMGAQGANYDLSRFGMEINRASPRQADLMIVAGRVSRKMAPVVRRLYDQMADPKWVIAMGDCAACGGVFNNYAIVQGVDEIVPVDVYVAGCPPRPEALIDGIIHLHEKVKRMRLDGELREPVRLS
>NC_009523|4584386:4650453|4591090_4591783_-|WP_011958364.1|DBSCAN-SWA
MDLTAILFLIGFIVVFGWFLYTFTQSSRKEKETKQLLTQSLGFSSFEADRSLAGKISSLYQRPGSKNNYQLRHVSRRLIPDGTMFLFDLVDRSGNDDSWVERQAVAIISPSLKLPPFALFPKSNPKYALSGLANQVVEWGMSKIGEPVAFPQYPALGERYVVTSQDPEGLRVFMDDSLARFFGQTEMYTIHAAGDMFTFAEIDPNFKTADIQSMTRRVNRAMEIFHALQK
>NC_009523|4584386:4650453|4614810_4615041_-|WP_011958385.1|DBSCAN-SWA
MPRAFNVIIERDSEGYYVASVPELRGCHTQAKSLDTLMKRIREAIELCLEVEGETMPSQEFIGIQRVWVETASSHF
>NC_009523|4584386:4650453|4644334_4645333_-|WP_011958407.1|DBSCAN-SWA
MTTTASQAVPATAADADPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTPTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAAAEARAAAEARARAEAEEQARREAEARAAEARARAEAEARAEAEARARAEAEARLRALEAELRRLRGEQH
>NC_009523|4584386:4650453|4642220_4643180_-|WP_011958405.1|DBSCAN-SWA
MTTATTRPTPAADTPPDDPFRYGWRIVRRDLGDGCFDEELVPLRLIDLLHPEEGDQVLCNYDHQRRVRYLANVFLARVADRPDAVVLSDVRIAWDIPDLRPHGPDLMVIFGVAAVRNWSTFDVAQEQVRPTLIVEVTSPETRRFDLYEKVDHYDLAGVPYYVIVDAVERRGTSTVRVLGYERAGAAYRAMTPDARGWLWLEPLRVWIGVRDGEVYCFDEQGRQLGDYADLVTQVIESEERVAEALAEAKAQAQAWMNAEARAAAAEARAAAEAEARAAEARARAEAEARAEAEARARAEVEARLRALEAELRRLRGEEA
>NC_009523|4584386:4650453|4585064_4586375_+|WP_011958360.1|protease|DBSCAN-SWA
MSRTRSGNANSSNNRGAYLCSFCGRGQEEVQRLIAGPGNVFICDECVALCSAIIAEETGTRPSTRRSSASLPARLPTPRRLREWLDQYVIGQDRAKVVLSVAVYNHYKRLRAGQNADDVEIGKSNILLIGPTGSGKTLLAQTLARVLDVPFAIADATALTEAGYVGEDVENILLRLIQAAEGDIERAQTGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGCVAHVPPVPGRKHPQQEYISFDTTHVLFICGGAFEGLDKIISQRIGGKRSIGFHAGESSDAPASLLSQVTPDDLLRYGFIPEFVGRLPVVAALDPLDKQAMIRILTEPRNAIIKQYQKMLALDHVELEVTPDALEAIAERALRSKTGARALRTIVEEILLDVMYEVPSQEHIGRCIINAEVVEGRGHPILVPRSAERQEYRRRMDEAV
>NC_009523|4584386:4650453|4590423_4591125_-|WP_157041157.1|protease|DBSCAN-SWA
MPWKSSTHCKNKTLNMRRQISSASLLFGLPFLILPVMVGIFTLFAHWLGDQAGYLLGFGFYWLLWCLMIPRILLGKAEFATILHDRAPLFSRANWPAALLWLTVTLVAVFMYTGEFVRAPPILILIAVPLATLNGCCEEILWRGLYVRCFPHNPWLAILYPAVGFALWHVAPQMIFPAENMFGFVLSTFFLALPYGYIAWRTGSARWTAISHSLSEILALSGSLAPTMLALFP
>NC_009523|4584386:4650453|4626518_4627295_-|WP_011958397.1|DBSCAN-SWA
MASETLDALREFAADLAWHAGRLTLRYFQTGLTPDIKDDQTPVTVADREAERLMRRMIEDRYPHHSILGEEEGETRPGASHRWILDPIDGTKSFVQGVPLYGVLVGLERDGESVVGAVSFPALGDFLTAAKGQGCLWNGRRARVSPVSELRQATLLSSDAESMAPHGRESAYRRLAGSVRLVRTWGDAYGYSLVATGRAEIMIDPVMSVWDCAALFPIVTEAGGTFTDWNGIPTIHAGEAIGTNSVLLEQVLQAIRQG
>NC_009523|4584386:4650453|4592215_4592725_-|WP_011958365.1|DBSCAN-SWA
MASRRKTWQEKMADKEGLPKILPLEERFPCYNALHSIGVEAGDPVVLVNSGEVVALMRQMPYGHLTTIIEICQALARHYQVRGCCTLTTGIVIMTAANAAVEAGGAPPELDIPYWRTLKADGFLNEKFPGGAEAHRALLEQEGFTIARKGRRYVVADYRRYLFTDFSFS
>NC_009523|4584386:4650453|4640623_4641124_-|WP_157041160.1|DBSCAN-SWA
MIQKVRIMMQTFIERGGWWVTAQFGLLFALVAAPPELPGLPTLATILGQGALIVGVVLCGCGAMLAGAGLLHLGANLTPFPRPRDDGRLVQHGAYAIVRHPIYSGIIIGAFGWSLLRGSIIALVLSVALLVFFHLKSRREERWLVERYPEYADYQKRVKKIIPFIW
>NC_009523|4584386:4650453|4630800_4631763_+|WP_011958399.1|transposase|DBSCAN-SWA
MASRESLFIGIDVSKQTLDVAFGADPHAPRETIPSTDEGVQLLVTRLQRLQPTLIVLEATGGLERMVFAQLLQAGLPTARVQPRRVRALAHAEGRQAKTDRLDARLLARFAERVRPPHHQATDEQRASLRDLLVRREQVIQMRTAEINRLTAAAPNLRPGIQQHIDWLDQEIRALEQERDNEAERTDEVRRKRELRESVPGIGAITALNLLLRLPELGTINRTEAAAFVGVAPYANQSGAQHKPRHSSGGRRDVRSVLYMATLAATRRRLVRRAFDQRLCQAGKPRKVAIVAAMRKLLTILGAILRQQKPWDPAVHTSAP
>NC_009523|4584386:4650453|4622342_4623248_+|WP_011958393.1|DBSCAN-SWA
MSDVVTLGECMAVLYPPDPVSLDEARTLLIDIGGAEANLAIALCRLGHSARFISRVGDDPFGRRVRAVLSTEGVDTSALLIDPEAPTGVFFREWLADGARRVYYYRRNSAASRITPDDLTPAQFNGARIVHLTGITPALSASCAAACERAIELARAAGALISFDPNFRPRLWSASQARDTLLPLMRAADILLIGHEDAQALLEVDNDDDALMAAAALGAQVVVLKCAERGARALANGQHVTTPAYPVRQVVDPVGAGDGFDAGFLAGWLRGWSMSDSLALGARIGAAAVETLGDYVGYPRV
>NC_009523|4584386:4650453|4631877_4633602_-|WP_011958400.1|DBSCAN-SWA
MIRIRFADEGRTVETDRTGHDVLNTPVLNKGSAWSEEERIGLGLLGLLPYHISTIDEQLARVYRNYQQRTNDLDRYLYLTDLQDRNETLFYRLLLEHITEMMPIIYTPEVGVACQRYSHLFHRPRGLFISYPHRDQIETMLRAWPFADQVRVIVVTDGERILGLGDQGMGGIGIPIGKLTLYSLCAGIHPATTLPIVLDVGTNNPALLNDPLYLGWRHERVRGREYDDFIEQFVTAVEKVFPHALLQWEDFAKDNARNLLDRYRDRILSFNDDIQGTGAVTLAGWLAAVEISGVPLADQRIVMLGAGSAATGIAEQIVAVMVEAGIPLEQARRTIWLIDSRDLVHTRRTGLEAVKMLYAQPYEMLEGWTREGSEAFTLYDVVSNVRPTCLIGTSAQPGAFDERTIREMARHVERPVIFPLSNPTSKSEAVPADLIAWTEGRALVATGSPFEPVTYGGRTFTIGQCNNVFIFPGVGLGVIAVGAKRVTDAMFIAAARALSAFSPARQDPTASLYPSLTQVRDVSRAVAQAVAAEAVRSGLAAPLSAEEQTARINATMWTPAYPQVRRMEEHTVHH
>NC_009523|4584386:4650453|4586393_4587290_+|WP_011958361.1|DBSCAN-SWA
MTAPQPTEPRATIGVIGGSGLYAMEGLADVERVTLETPFGAPSDAYVIGTIAGRRVAFLPRHGVGHRFSPSEVPNRANIYGFRMLGVRYLIAVSAVGSLREEYAPGHIVIPDQLYDRTKGHRPDTFFGGGLVVHVQFDRPFDAGLSDRLEQAARAAGATVHRGGTLVVMEGPQFSTLAESEENRRRGHDLIGMTALPEAKLAREAEIAYAMLAMVTDYDCWHPGHDAVTVEMVVQVLRANARLAQDVVQRVIPLIGDGFDSPAHRALATAIITDPAVVPPEKLAQVELLVGQYMRRDA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011958359.1|4584386_4585046_+|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.6e-44	47.0
WP_011958360.1|4585064_4586375_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.1e-124	56.6
WP_011958361.1|4586393_4587290_+	S-methyl-5'-thioadenosine phosphorylase	NA	NA	NA	NA
WP_011958362.1|4589321_4590395_-	serine hydrolase	A0A2H4JAN9	uncultured_Caudovirales_phage	5.4e-10	28.1
WP_157041157.1|4590423_4591125_-|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_011958364.1|4591090_4591783_-	hypothetical protein	NA	NA	NA	NA
WP_011958365.1|4592215_4592725_-	MGMT family protein	NA	NA	NA	NA
WP_157041158.1|4593364_4593517_-	hypothetical protein	NA	NA	NA	NA
WP_011958367.1|4594742_4599410_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_011958368.1|4599417_4600932_+	hypothetical protein	NA	NA	NA	NA
WP_011958369.1|4601142_4601589_-	universal stress protein UspA	NA	NA	NA	NA
WP_011958370.1|4601606_4604396_-	cation-transporting P-type ATPase	M1HX51	Paramecium_bursaria_Chlorella_virus	6.7e-36	24.6
WP_011958371.1|4604415_4604940_-	NAD(P)H-dependent oxidoreductase subunit E	NA	NA	NA	NA
WP_011958372.1|4604958_4606212_-	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA
WP_011958373.1|4606218_4606743_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA
WP_011958374.1|4606781_4607285_-	NADH-quinone oxidoreductase subunit B 2	NA	NA	NA	NA
WP_011958375.1|4607275_4607632_-	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA
WP_011958376.1|4607747_4608275_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	3.7e-20	46.5
WP_011958377.1|4608276_4609533_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_011958378.1|4609566_4610337_-	hypothetical protein	NA	NA	NA	NA
WP_011958379.1|4610414_4611407_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_011958380.1|4611488_4611947_+	hypothetical protein	NA	NA	NA	NA
WP_011958381.1|4612004_4612451_-	septum formation initiator family protein	NA	NA	NA	NA
WP_011958382.1|4612541_4612973_-	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_041334117.1|4613107_4613899_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_041334119.1|4614036_4614534_+	carbonic anhydrase	NA	NA	NA	NA
WP_011958385.1|4614810_4615041_-	type II toxin-antitoxin system HicB family antitoxin	A0A0C5KMI2	ANMV-1_virus	1.5e-10	60.4
WP_157041159.1|4615611_4615950_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_011958387.1|4616028_4616853_-|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011958388.1|4616889_4617831_-	hypothetical protein	NA	NA	NA	NA
WP_011958389.1|4618503_4619634_-	sodium ion-translocating decarboxylase subunit beta	NA	NA	NA	NA
WP_157041384.1|4619649_4620108_-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_011958391.1|4620107_4620452_-	OadG family protein	NA	NA	NA	NA
WP_083763379.1|4620590_4622093_-	methylmalonyl-CoA carboxyltransferase	NA	NA	NA	NA
WP_011958393.1|4622342_4623248_+	sugar kinase	NA	NA	NA	NA
WP_011958394.1|4623294_4623819_-	PH domain-containing protein	NA	NA	NA	NA
WP_011958395.1|4623837_4625085_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_011958396.1|4625093_4626347_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_011958397.1|4626518_4627295_-	histidinol-phosphatase	NA	NA	NA	NA
WP_011958399.1|4630800_4631763_+|transposase	IS110-like element ISRfsp2 family transposase	NA	NA	NA	NA
WP_011958400.1|4631877_4633602_-	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_011958401.1|4633731_4635744_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_011958402.1|4637359_4640617_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.3e-27	32.9
WP_157041160.1|4640623_4641124_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
WP_157041161.1|4641232_4642195_+	glycine cleavage system protein T	NA	NA	NA	NA
WP_011958405.1|4642220_4643180_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_011958406.1|4643247_4644240_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_011958407.1|4644334_4645333_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_011958408.1|4645406_4647200_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_011958409.1|4647345_4649151_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_011958410.1|4649283_4650453_-|protease	trypsin-like serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	3.1e-19	26.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage
NC_009523.1|WP_157041158.1|4593364_4593517_-|hypothetical-protein	4593364_4593517_-	50 aa aa	NA	NA	NA	4584386-4650453	yes

Protein sequences of NC_009523.1|WP_157041158.1|4593364_4593517_-|hypothetical-protein

>NC_009523.1|WP_157041158.1|4593364_4593517_-|hypothetical-protein
MRAYDSEFAMNRTQLNISRFIIDTLPVKMATLLFVSGDESVVTAGDHARA

Self-targetings in the prophage

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_009523_93	Orphan	93.1|5100250|33|NC_009523|CRISPRCasFinder	5100250-5100282	33	4587775-4587807	2

1. spacer 93.1|5100250|33|NC_009523|CRISPRCasFinder matches to NC_009523 position: 4587775-4587807, mismatch: 2

tagccagggcgaagcccgcctgcgcgggctata	CRISPR spacer
taaccagggcaaagcccgcctgcgcgggctata	Protospacer
**.*******.**********************