CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_010278	Actinobacillus pleuropneumoniae serovar 3 str. JL03, complete sequence	1 crisprs	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,csa3,DEDDh,DinG,PD-DExK,cas3	1	21	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_010278_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_010278_1

236954-239025

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTATACGGCAGTGAAG	CRISPRCasFinder
TTTCTAAGCTGCCTATACGGCAGTGAAG	CRT
TTTCTAAGCTGCCTATACGGCAGTGAAG	PILER-CR
TTTCTAAGCTGCCTATACGGCAGTGAAG	PILER-CR

34 spacers

cas1,cas3-cas2,cas6f,cas7f,cas5f,cas8f

The CRISPR arrays of NC_010278_1

>merge|NC_010278|1|236954-239025|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
ATTTGTGGCTGCCTATACGGCAGTGAAGGCAGTCAGTCATCAGCTTGGACTTTTACTAGATTTCTAAGCTGCCTATACGGCAGTGAAGTTTTCCCCCACCAACCGAGTGTTTTCAACATTTTTCTAAGCTGCCTATACGGCAGTGAAGGCTTGAGATTTCATTTTCTCCTTTTTCTCAAATTTCTAAGCTGCCTATACGGCAGTGAAGATTGTCAGAAAGAGGACTTTTTTCCATTTAAATTTCTAAGCTGCCTATACGGCAGTGAAGGGTATCAATAGAGTATTGAATCTTGTTCGGGCTTTCTAAGCTGCCTATACGGCAGTGAAGATGAGGTAATAAATGGAAAACGACTACATAGCTTTCTAAGCTGCCTATACGGCAGTGAAGACGATAATGAAATCAGGCAAACATAAAAAAATTTTCTAAGCTGCCTATACGGCAGTGAAGCTAACTGTTTTAGATTTTTGATTTCATTGATATTTCTAAGCTGCCTATACGGCAGTGAAGTCAAGGTTTCCGGTTCCGTTATTCGAATGGAATTTCTAAGCTGCCTATACGGCAGTGAAGAAGATAATCTTTTAAGATCATGTGCTTCAAACTTTCTAAGCTGCCTATACGGCAGTGAAGCCCGGACAGCTTGGAATTTTTCAATATCGCAATTTCTAAGCTGCCTATACGGCAGTGAAGACTAATTTCGGCATTTGACCAAGCCACGCATATTTCTAAGCTGCCTATACGGCAGTGAAGATATTGCGATTGTCGGTGTATCTGAAGCCTATTTTCTAAGCTGCCTATACGGCAGTGAAGGTATCTCATAAGCGGCAGAATATTCCTGATAATTTCTAAGCTGCCTATACGGCAGTGAAGCAGAATTTGCAGCGTATCCGAAGGACTACAAATTTCTAAGCTGCCTATACGGCAGTGAAGATGATAAACTGATCACTTTATTTGCTTCTCAAGTTTCTAAGCTGCCTATACGGCAGTGAAGTTTCTAATTGTAGTATTCCTTCCGGTGGTTCAGTTTCTAAGCTGCCTATACGGCAGTGAAGTGATATTAATTTCTTCTATTTTTTGTTTATCTTTTCTAAGCTGCCTATACGGCAGTGAAGACTGGCGACCATCTCTAAATCACGTTGTGCAATTTCTAAGCTGCCTATACGGCAGTGAAGATTAGAGTTGGCGATATTGTGATACGCAATAATTTCTAAGCTGCCTATACGGCAGTGAAGAGTTCGCCCCCTGATCCTGTTCCTTTTCCAAAGTTTCTAAGCTGCCTATACGGCAGTGAAGCCCTGTAATGTACTGCCTTTATTGTATTTTGCTTTCTAAGCTGCCTATACGGCAGTGAAGAATAACATTCAACGGGCTTTAGTTTTACCACATTTCTAAGCTGCCTATACGGCAGTGAAGGATTGCCATTGCAACACGGGCAATTTGGCATATTTCTAAGCTGCCTATACGGCAGTGAAGGTTATAGTTAAGTCGTCATCTCGTCCTTAACTTTTCTAAGCTGCCTATACGGCAGTGAAGACGAAGTTTTTAACCATTTGCTTTTTTTAACTTTTCTAAGCTGCCTATACGGCAGTGAGGAATTGCAACAATTTATTTTATGAGAATGTATATTTCTAAGCTGCCTATACGGCAGTGAAGGAAATCGGGGAAATTTTAAAACGTATTTTAGATTTCTAAGCTGCCTATACGGCAGTGAAGCAGTTTAAGAAATTTGCTCATGTGCTTATCAATTTCTAAGCTGCCTATACGGCAGTGAAGGTTTCAAACGTCACCCCTTTACAACACCAGGTTTTCTAAGCTGCCTATACGGCAGTGAAGTCGCCATAACACCTCCATGCGTGATTTTGCTTTTTTCTAAGCTGCCTATACGGCAGTGAAGTAAATGAAAATATCTGTAAAATGGCAATGAAATTTCTAAGCTGCCTATACGGCAGTGAAGAAATACAAAAAATGGGAGCATTGGCAAAATTATTTCTAAGCTGCCTATACGGCAGTGAAGAAAAATTAGGCAAGTAGCTACCGCCTCCCTACTTTCTAAGCTGCCTATACGGCAGTGAAG

>NC_010278|1|1|236954-239025|CRISPRCasFinder
ATTTGTGGCTGCCTATACGGCAGTGAAG	GCAGTCAGTCATCAGCTTGGACTTTTACTAGA
TTTCTAAGCTGCCTATACGGCAGTGAAG	TTTTCCCCCACCAACCGAGTGTTTTCAACATT
TTTCTAAGCTGCCTATACGGCAGTGAAG	GCTTGAGATTTCATTTTCTCCTTTTTCTCAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATTGTCAGAAAGAGGACTTTTTTCCATTTAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GGTATCAATAGAGTATTGAATCTTGTTCGGGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATGAGGTAATAAATGGAAAACGACTACATAGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACGATAATGAAATCAGGCAAACATAAAAAAAT
TTTCTAAGCTGCCTATACGGCAGTGAAG	CTAACTGTTTTAGATTTTTGATTTCATTGATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	TCAAGGTTTCCGGTTCCGTTATTCGAATGGAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAGATAATCTTTTAAGATCATGTGCTTCAAAC
TTTCTAAGCTGCCTATACGGCAGTGAAG	CCCGGACAGCTTGGAATTTTTCAATATCGCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACTAATTTCGGCATTTGACCAAGCCACGCATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATATTGCGATTGTCGGTGTATCTGAAGCCTAT
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTATCTCATAAGCGGCAGAATATTCCTGATAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	CAGAATTTGCAGCGTATCCGAAGGACTACAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATGATAAACTGATCACTTTATTTGCTTCTCAAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	TTTCTAATTGTAGTATTCCTTCCGGTGGTTCAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	TGATATTAATTTCTTCTATTTTTTGTTTATCT
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACTGGCGACCATCTCTAAATCACGTTGTGCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATTAGAGTTGGCGATATTGTGATACGCAATAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AGTTCGCCCCCTGATCCTGTTCCTTTTCCAAAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	CCCTGTAATGTACTGCCTTTATTGTATTTTGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	AATAACATTCAACGGGCTTTAGTTTTACCACA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GATTGCCATTGCAACACGGGCAATTTGGCATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTTATAGTTAAGTCGTCATCTCGTCCTTAACT
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACGAAGTTTTTAACCATTTGCTTTTTTTAACT
TTTCTAAGCTGCCTATACGGCAGTGAGG	AATTGCAACAATTTATTTTATGAGAATGTATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GAAATCGGGGAAATTTTAAAACGTATTTTAGA
TTTCTAAGCTGCCTATACGGCAGTGAAG	CAGTTTAAGAAATTTGCTCATGTGCTTATCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTTTCAAACGTCACCCCTTTACAACACCAGGT
TTTCTAAGCTGCCTATACGGCAGTGAAG	TCGCCATAACACCTCCATGCGTGATTTTGCTTT
TTTCTAAGCTGCCTATACGGCAGTGAAG	TAAATGAAAATATCTGTAAAATGGCAATGAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAATACAAAAAATGGGAGCATTGGCAAAATTA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAAAATTAGGCAAGTAGCTACCGCCTCCCTAC
TTTCTAAGCTGCCTATACGGCAGTGAAG

>NC_010278|1|1|236954-239025|CRT
ATTTGTGGCTGCCTATACGGCAGTGAAG	GCAGTCAGTCATCAGCTTGGACTTTTACTAGA
TTTCTAAGCTGCCTATACGGCAGTGAAG	TTTTCCCCCACCAACCGAGTGTTTTCAACATT
TTTCTAAGCTGCCTATACGGCAGTGAAG	GCTTGAGATTTCATTTTCTCCTTTTTCTCAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATTGTCAGAAAGAGGACTTTTTTCCATTTAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GGTATCAATAGAGTATTGAATCTTGTTCGGGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATGAGGTAATAAATGGAAAACGACTACATAGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACGATAATGAAATCAGGCAAACATAAAAAAAT
TTTCTAAGCTGCCTATACGGCAGTGAAG	CTAACTGTTTTAGATTTTTGATTTCATTGATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	TCAAGGTTTCCGGTTCCGTTATTCGAATGGAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAGATAATCTTTTAAGATCATGTGCTTCAAAC
TTTCTAAGCTGCCTATACGGCAGTGAAG	CCCGGACAGCTTGGAATTTTTCAATATCGCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACTAATTTCGGCATTTGACCAAGCCACGCATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATATTGCGATTGTCGGTGTATCTGAAGCCTAT
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTATCTCATAAGCGGCAGAATATTCCTGATAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	CAGAATTTGCAGCGTATCCGAAGGACTACAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATGATAAACTGATCACTTTATTTGCTTCTCAAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	TTTCTAATTGTAGTATTCCTTCCGGTGGTTCAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	TGATATTAATTTCTTCTATTTTTTGTTTATCT
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACTGGCGACCATCTCTAAATCACGTTGTGCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATTAGAGTTGGCGATATTGTGATACGCAATAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AGTTCGCCCCCTGATCCTGTTCCTTTTCCAAAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	CCCTGTAATGTACTGCCTTTATTGTATTTTGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	AATAACATTCAACGGGCTTTAGTTTTACCACA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GATTGCCATTGCAACACGGGCAATTTGGCATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTTATAGTTAAGTCGTCATCTCGTCCTTAACT
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACGAAGTTTTTAACCATTTGCTTTTTTTAACT
TTTCTAAGCTGCCTATACGGCAGTGAGG	AATTGCAACAATTTATTTTATGAGAATGTATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GAAATCGGGGAAATTTTAAAACGTATTTTAGA
TTTCTAAGCTGCCTATACGGCAGTGAAG	CAGTTTAAGAAATTTGCTCATGTGCTTATCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTTTCAAACGTCACCCCTTTACAACACCAGGT
TTTCTAAGCTGCCTATACGGCAGTGAAG	TCGCCATAACACCTCCATGCGTGATTTTGCTTT
TTTCTAAGCTGCCTATACGGCAGTGAAG	TAAATGAAAATATCTGTAAAATGGCAATGAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAATACAAAAAATGGGAGCATTGGCAAAATTA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAAAATTAGGCAAGTAGCTACCGCCTCCCTAC
TTTCTAAGCTGCCTATACGGCAGTGAAG

>NC_010278|1|1|237014-237821|PILER-CR
TTTCTAAGCTGCCTATACGGCAGTGAAG	TTTTCCCCCACCAACCGAGTGTTTTCAACATT
TTTCTAAGCTGCCTATACGGCAGTGAAG	GCTTGAGATTTCATTTTCTCCTTTTTCTCAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATTGTCAGAAAGAGGACTTTTTTCCATTTAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GGTATCAATAGAGTATTGAATCTTGTTCGGGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATGAGGTAATAAATGGAAAACGACTACATAGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACGATAATGAAATCAGGCAAACATAAAAAAAT
TTTCTAAGCTGCCTATACGGCAGTGAAG	CTAACTGTTTTAGATTTTTGATTTCATTGATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	TCAAGGTTTCCGGTTCCGTTATTCGAATGGAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAGATAATCTTTTAAGATCATGTGCTTCAAAC
TTTCTAAGCTGCCTATACGGCAGTGAAG	CCCGGACAGCTTGGAATTTTTCAATATCGCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACTAATTTCGGCATTTGACCAAGCCACGCATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATATTGCGATTGTCGGTGTATCTGAAGCCTAT
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTATCTCATAAGCGGCAGAATATTCCTGATAA
TTTCTAAGCTGCCTATACGGCAGTGAAGCAGAATTTGCAGCGTATCCGAAGGACTACAAATTTCTAAGCTGCCTATACGGCAGTGAAGATGATAAACTGATCACTTTATTTGCTTCTCAAGTTTCTAAGCTGCCTATACGGCAGTGAAG	TTTCTAATTGTAGTATTCCTTCCGGTGGTTCAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	TGATATTAATTTCTTCTATTTTTTGTTTATCT
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACTGGCGACCATCTCTAAATCACGTTGTGCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATTAGAGTTGGCGATATTGTGATACGCAATAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AGTTCGCCCCCTGATCCTGTTCCTTTTCCAAAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	CCCTGTAATGTACTGCCTTTATTGTATTTTGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	AATAACATTCAACGGGCTTTAGTTTTACCACA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GATTGCCATTGCAACACGGGCAATTTGGCATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTTATAGTTAAGTCGTCATCTCGTCCTTAACT
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACGAAGTTTTTAACCATTTGCTTTTTTTAACT
TTTCTAAGCTGCCTATACGGCAGTGAGG	AATTGCAACAATTTATTTTATGAGAATGTATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GAAATCGGGGAAATTTTAAAACGTATTTTAGA
TTTCTAAGCTGCCTATACGGCAGTGAAG	CAGTTTAAGAAATTTGCTCATGTGCTTATCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTTTCAAACGTCACCCCTTTACAACACCAGGT
TTTCTAAGCTGCCTATACGGCAGTGAAG	TCGCCATAACACCTCCATGCGTGATTTTGCTTT
TTTCTAAGCTGCCTATACGGCAGTGAAG	TAAATGAAAATATCTGTAAAATGGCAATGAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAATACAAAAAATGGGAGCATTGGCAAAATTA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAAAATTAGGCAAGTAGCTACCGCCTCCCTAC


>NC_010278|1|2|237915-239025|PILER-CR
	TTTTCCCCCACCAACCGAGTGTTTTCAACATT
TTTCTAAGCTGCCTATACGGCAGTGAAG	GCTTGAGATTTCATTTTCTCCTTTTTCTCAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATTGTCAGAAAGAGGACTTTTTTCCATTTAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GGTATCAATAGAGTATTGAATCTTGTTCGGGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATGAGGTAATAAATGGAAAACGACTACATAGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACGATAATGAAATCAGGCAAACATAAAAAAAT
TTTCTAAGCTGCCTATACGGCAGTGAAG	CTAACTGTTTTAGATTTTTGATTTCATTGATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	TCAAGGTTTCCGGTTCCGTTATTCGAATGGAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAGATAATCTTTTAAGATCATGTGCTTCAAAC
TTTCTAAGCTGCCTATACGGCAGTGAAG	CCCGGACAGCTTGGAATTTTTCAATATCGCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACTAATTTCGGCATTTGACCAAGCCACGCATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATATTGCGATTGTCGGTGTATCTGAAGCCTAT
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTATCTCATAAGCGGCAGAATATTCCTGATAA
TTTCTAAGCTGCCTATACGGCAGTGAAGCAGAATTTGCAGCGTATCCGAAGGACTACAAATTTCTAAGCTGCCTATACGGCAGTGAAGATGATAAACTGATCACTTTATTTGCTTCTCAAGTTTCTAAGCTGCCTATACGGCAGTGAAG	TTTCTAATTGTAGTATTCCTTCCGGTGGTTCAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	TGATATTAATTTCTTCTATTTTTTGTTTATCT
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACTGGCGACCATCTCTAAATCACGTTGTGCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	ATTAGAGTTGGCGATATTGTGATACGCAATAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AGTTCGCCCCCTGATCCTGTTCCTTTTCCAAAG
TTTCTAAGCTGCCTATACGGCAGTGAAG	CCCTGTAATGTACTGCCTTTATTGTATTTTGC
TTTCTAAGCTGCCTATACGGCAGTGAAG	AATAACATTCAACGGGCTTTAGTTTTACCACA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GATTGCCATTGCAACACGGGCAATTTGGCATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTTATAGTTAAGTCGTCATCTCGTCCTTAACT
TTTCTAAGCTGCCTATACGGCAGTGAAG	ACGAAGTTTTTAACCATTTGCTTTTTTTAACT
TTTCTAAGCTGCCTATACGGCAGTGAGG	AATTGCAACAATTTATTTTATGAGAATGTATA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GAAATCGGGGAAATTTTAAAACGTATTTTAGA
TTTCTAAGCTGCCTATACGGCAGTGAAG	CAGTTTAAGAAATTTGCTCATGTGCTTATCAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	GTTTCAAACGTCACCCCTTTACAACACCAGGT
TTTCTAAGCTGCCTATACGGCAGTGAAG	TCGCCATAACACCTCCATGCGTGATTTTGCTTT
TTTCTAAGCTGCCTATACGGCAGTGAAG	TAAATGAAAATATCTGTAAAATGGCAATGAAA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAATACAAAAAATGGGAGCATTGGCAAAATTA
TTTCTAAGCTGCCTATACGGCAGTGAAG	AAAAATTAGGCAAGTAGCTACCGCCTCCCTAC
TTTCTAAGCTGCCTATACGGCAGTGAAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_010278.1\|WP_012262739.1\|240735_241695_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NC_010278.1\|WP_012262736.1\|232616_235964_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NC_010278.1\|WP_005596065.1\|248269_248467_+\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NC_010278.1\|WP_005596031.1\|245561_246236_+\|CsgG/HfaB-family-protein	unknown	unknown	gnl\|CDD\|224379
NC_010278.1\|WP_005603442.1\|224681_225719_-\|rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|236779
NC_010278.1\|WP_005595991.1\|226817_228671_+\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
NC_010278.1\|WP_005603437.1\|223521_223995_+\|phosphatidylglycerophosphatase-A	unknown	unknown	gnl\|CDD\|368021
NC_010278.1\|WP_005596003.1\|230142_231408_-\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NC_010278.1\|WP_005600274.1\|235960_236917_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
NC_010278.1\|WP_011848337.1\|246245_246593_+\|DUF4810-domain-containing-protein	unknown	unknown	gnl\|CDD\|379760
NC_010278.1\|WP_005606946.1\|243488_245420_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234752
NC_010278.1\|WP_043947923.1\|222543_223509_+\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|235583
NC_010278.1\|WP_005603453.1\|231638_232526_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|167337
NC_010278.1\|WP_005596036.1\|246604_247264_+\|DUF799-domain-containing-protein	unknown	unknown	gnl\|CDD\|368539
NC_010278.1\|WP_039709529.1\|224007_224634_+\|LysE-family-transporter	unknown	unknown	gnl\|CDD\|273358
NC_010278.1\|WP_005595989.1\|225884_226697_+\|inositol-1-monophosphatase	unknown	unknown	gnl\|CDD\|236753
NC_010278.1\|WP_012262737.1\|239166_239736_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09674_cas6f_CAS-I-F	gnl\|CDD\|187870
NC_010278.1\|WP_080515067.1\|247478_248021_+\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NC_010278.1\|WP_012262738.1\|239738_240734_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
NC_010278.1\|WP_005606943.1\|241691_243041_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|378220

Protein	Function_ID	Function_description	E-value
NC_010278.1\|WP_012262739.1\|240735_241695_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	1.58286e-137
NC_010278.1\|WP_012262736.1\|232616_235964_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NC_010278.1\|WP_005596065.1\|248269_248467_+\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	3.48394e-21
NC_010278.1\|WP_005596031.1\|245561_246236_+\|CsgG/HfaB-family-protein	gnl\|CDD\|224379	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane].	2.87652e-67
NC_010278.1\|WP_005603442.1\|224681_225719_-\|rRNA-methyltransferase	gnl\|CDD\|236779	PRK10864, PRK10864, putative methyltransferase; Provisional.	2.58016e-76
NC_010278.1\|WP_005595991.1\|226817_228671_+\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NC_010278.1\|WP_005603437.1\|223521_223995_+\|phosphatidylglycerophosphatase-A	gnl\|CDD\|368021	pfam04608, PgpA, Phosphatidylglycerophosphatase A. This family represents a family of bacterial phosphatidylglycerophosphatases (EC:3.1.3.27), known as PgpA. It appears that bacteria possess several phosphatidylglycerophosphatases, and thus, PgpA is not essential in Escherichia coli.	1.98828e-51
NC_010278.1\|WP_005596003.1\|230142_231408_-\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NC_010278.1\|WP_005600274.1\|235960_236917_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.82275e-179
NC_010278.1\|WP_011848337.1\|246245_246593_+\|DUF4810-domain-containing-protein	gnl\|CDD\|379760	pfam16068, DUF4810, Domain of unknown function (DUF4810). This family of proteins is found in bacteria. Proteins in this family are typically between 117 and 134 amino acids in length. There is a conserved PES sequence motif. It is a putative lipoprotein.	8.48828e-33
NC_010278.1\|WP_005606946.1\|243488_245420_+\|threonine--tRNA-ligase	gnl\|CDD\|234752	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.	0
NC_010278.1\|WP_043947923.1\|222543_223509_+\|thiamine-phosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	6.25479e-142
NC_010278.1\|WP_005603453.1\|231638_232526_-\|NAD(+)-kinase	gnl\|CDD\|167337	PRK02231, ppnK, NAD(+) kinase.	0
NC_010278.1\|WP_005596036.1\|246604_247264_+\|DUF799-domain-containing-protein	gnl\|CDD\|368539	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799). This family consists of several bacterial proteins of unknown function. Some of the family members are described as putative lipoproteins.	7.57253e-102
NC_010278.1\|WP_039709529.1\|224007_224634_+\|LysE-family-transporter	gnl\|CDD\|273358	TIGR00949, Uncharacterized_membrane_protein_YahN, The Resistance to Homoserine/Threonine (RhtB) Family protein. [Transport and binding proteins, Amino acids, peptides and amines].	3.01834e-36
NC_010278.1\|WP_005595989.1\|225884_226697_+\|inositol-1-monophosphatase	gnl\|CDD\|236753	PRK10757, PRK10757, inositol-1-monophosphatase.	6.75423e-148
NC_010278.1\|WP_012262737.1\|239166_239736_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.9152e-64
NC_010278.1\|WP_080515067.1\|247478_248021_+\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	1.39801e-94
NC_010278.1\|WP_012262738.1\|239738_240734_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NC_010278.1\|WP_005606943.1\|241691_243041_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	3.82061e-155

>NC_010278.1|WP_005600274.1|235960_236917_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MKKTPYIPSSDLKTILHSKRANIYYLEHCRILLNGGRVEYVTDKGNESLYWNIPIANTICLLLGSGTSITQAAMRELSKAGVMVGFCSGGGTPLFNGTEAEIGCDFFSPQSEYRPVEYLQQWCRFWFDDNKRLNSAKTLQLARLQLLLRTWNKFDWEYAQDKLTALVQHYQEEFTNVKDSQSLLAAEGRLTAKLYALANQATLNDESFKRESGKEGANQFLDHGNYLAYGLGATACWVLGLPHGLAILHGKTRRGGLVFDAADIIKDAIILPQAFISAQNGDNEKQFRQACINNLIRFEALDIIINTLKQLASEGANI
>NC_010278.1|WP_012262736.1|232616_235964_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISQCNKNALTETRRILDQFAERCGDRCWQTAITQAGLETLHNMLRQTARKNTAVACYWTHGKNLTELLWIVGDKSQFNAEGRVPTNRTQRNILRADDENGWLSAYSIQILTAIAALLHDIGKANIAFQQKLKPKAKFFPDCYRHEWISTRLFEAMIAGCDTDEQWLARLANWQNYIEENPDWLPNLTLIADKSDHPHNFSHFPPLAKVVLWLILSHHKLPFTQKTLDCHSDQERILREHFMLKTAVEPFYRFLAPVEHWVMNQSEHPQPENFWQFKTLVMESKAWQKAMQRWANKALNHAPLRELSQLNKTINDPFLLILSRLCLIVGDHNYSSAPADRQLGDLNFFEKLIANTDKKTKQPKQALDEHLLGVCKTSAKFARLLPKLAKELPHIQQHRPFTKRTNLDRFKWQNRAFELARSLQSESEQAGFFGVNMASTGCGKTLANAKIMYGLSNQDGARFTIALGLRVLTLQTGLALRQKLMLSSEQLAVLVGGSATKQLFELQNESVQSGSESAQEWFEDNEVYGMNFLESGIAEEEFGTLLADNKAKKLLYAPIVSCTLDHMIQATETIRGGKHIVPLLRLLTSDLVLDEPDDFSQSDLPALSRLVHLAGMFGSKVLLSSATLTPDLISGLFNAYQAGRKIYNRHQGINPELPICCAWIDEYKQQQQKCAAVKEFERYHALFTASRAEKLMQSPIRHKAEIIQLPPFSAVENQDINYTMLADSLIEQAITLHQRYAQQDPISKKFVSVGLIRFANIKPMIPLVETLFKTPLNTQFSDYKIHLCCYHSRQLLLLRSKLEEKLDRILNRHEPEALFSQPEIMSALTQDKAVHHIFIVLGSPVTEVGRDHDYDWAIVDPSSMRSIIQLAGRVWRHRPEKIATQANILLLPTNWRGLQTKNNGSEPIFCRPGFEDQSNKLTSHKTVDLIKQEHLASITAIPRIIKPLVLQAETNLADLEHKVIGDLLNNKGINRVNAYWQDNLTNRLNANLPLITPFRKNEGKWQTEVVCLPSEESHWEFMFKSSEKAWEDPYFENDYLAEISYQKLNCESPWITPWLTTPLNQALSELCEQLDEADQTQAALRFATVSLQHYGKTLPIWKFNETLGFWQP
>NC_010278.1|WP_005603453.1|231638_232526_-|NAD(+)-kinase
MKPEERFFECIAIVGKPRHEIALETHLAVYNWLKDRHYRVLVEKSIAQQLNLPEARSLEEIGQQANLVIVIGGDGNMLGMARRLAEYQVPLIGINRGNLGFLTDIAPHSTFEQLHNCIERGEFVIEERFLLEARIERNGKIIATNNALNEVVIHPTQVARIIEFEVYIDGKFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPNMNAIALVPMHPHTLSSRPLVIDGDSQISLRFAQYNQPSLEVSCDGQYDLPFTPEDRIIVEKSPNKLRLLHLKDYNYFTVLGSKLGWSSKLF
>NC_010278.1|WP_005596003.1|230142_231408_-|serine-hydroxymethyltransferase
MFTANMNIQDYDPILWQAIENENRRQEEHIELIASENYASPRVMQAQGSQFTNKYAEGYPGKRYYGGCEYADIVEQLAIDRAKQLFGADYVNVQPHSGSQANAAVYGALIQPNDTILGMDLAHGGHLTHGAKVSFSGKIYNSVLYGITAEGLIDYEDVRQKALECKPKMIVAGFSAYSQIVDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPSPLPYAHVVTTTTHKTLGGPRGGLILSACGDEEIYKKLQSSVFPANQGGPLVHIIAAKAVCFKEALEPEYKIYQQNVVKNAKAMVEVFKQRGYEVISNGTENHLFLVSFVKQGLTGKAADAALGQANITVNKNSVPNDPQKPFITSGIRIGTPAVTRRGFKEADVQALAGWMCDVLDSIGKDNHEQVIAETKAKVLDICARLPVYAK
>NC_010278.1|WP_005595991.1|226817_228671_+|1-deoxy-D-xylulose-5-phosphate-synthase
MQNKYPLLSQINSPEDLRLLAKEQLQSVADELRAYLLESVSQTSGHLASGLGVVELTVALHYVYQTPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKNGIHPFPWREESLYDVLSVGHSSTSISAGVGIAVAAEKENAGRKTVCVIGDGAITAGMAFEAMNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSIYTTVRDGSKKVLDKVPTIKNFMKKSEEHMKGVISPESTLFEELGFNYIGPIDGHNIDELVKTLSNMRELKGPQFLHIRTKKGKGYEPAENDPIGYHGVPKFDPTCGQLPKSKTIPTYSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDVSFMRCIPNMTIMCPSDENEMRQMLYTAYRMNTPTAVRYPRGNAQGVALAPMQALEVGKGKLIQQGQKVAILNFGPLLNEARIVAEKHNYTLADMRFVKPLDEQLVAELADSHELLVTLEENAIQGGAGSAVNEYLQKIGKIRPLVMLGIPDFFVPQATQAESYADLGLDAAGIEQRIQAVVNQ
>NC_010278.1|WP_005595989.1|225884_226697_+|inositol-1-monophosphatase
MNPMLNIAIRAARKAGNIIAKGYEQAASEIEVAQKGTNDYVTAIDKAAEAAIIEVIRKSYPDHAIVGEESGILAGENENVQWVIDPLDGTTNFVKRLPHFAVSIAVRENGRTTVGVVYDPIRNELFTAVRGEGAKLNEFRLRVETERRDLNGTVLATGFPFKAAKHRPAHLNMLEGLMNNGVADFRRTGSAALDLAYVAANRVDGYFEIGLKPWDCAAGDLIVREAGAIVTNFVGGTDYLKSGNVVAGQARVVKEILNAIQPTLTEDLKN
>NC_010278.1|WP_005603442.1|224681_225719_-|rRNA-methyltransferase
MKPKFNENKPRFQTVEERRDNKFQTKSNRFEDKPRFDKPKFGGDKACFDRKDHQEAREAIYPTIGKKAAGEGNVQISVKGGNNTMKEKKTGPLSPRAPEKIKKNRAEEMKVYGENACIALFKQRPDAIVRLWATVEGAKKLGDILSYLAEHKKAYHVVDRAEMERVTGTEHHGDVCLLVKKAVPFSLEGYLQVPRKRDCLVLLDAVNNAQNVGGIIRTCAFYGVNGVIVESADTLNSSAAARVAEGGLEFVRPLETKHKQIALTQLRNAGYQVVHLTRNKQAAPLAKTKLAAKTVFVLSEIPAQDIEYPEDTTVQLSFENPLNSGLNVAVSTGILLNQWYQANII
>NC_010278.1|WP_039709529.1|224007_224634_+|LysE-family-transporter
MMTIFIVQLIGLISPGPDFFYISRKAASDSTRNAICACIGISIGVAIWAIVAVFGLSVLSQTTHIIQYIIMILGGSFLAYMGVKMVQVTQNAQFDESKTKVVQTTIRQEILKALSVNIANAKIAVFFSSVLSGYVAQLSNMTDLLAVLLILVGSAFIYFLLVSLLFSRKPIRNFYAKYSRYIDNIAGVIFILFGMILIFDGIKGLIGG
>NC_010278.1|WP_005603437.1|223521_223995_+|phosphatidylglycerophosphatase-A
MKNFNLKNPIHLFACGFGSGLLKPAPGTWGSLAGVLIAVLLWNLTESSLFFIGLTLVSFIAGCHICEKTSRDLNVHDDGRIVWDEIVAIFLMFAFLPEYNGLAYTLTFICFRFFDVLKPYPIRYFDEKLETGLGIMFDDILAAIYALIALHIVYWFI
>NC_010278.1|WP_043947923.1|222543_223509_+|thiamine-phosphate-kinase
MMEFEVIAQYFKRKNLRSDVDLSVGDDCAVTTLKPNERLAVTTDTLVSGTHFLPSISAADLAYKTLAVNLSDLAAMGAAPAWVSLALTLPKVDHQWLAEFSQSLFAVLDRYHVDLIGGDTTGGPLSLTLTAQGILPQDQGLFRHQAQVGDWIFVSGSLGDSAAGLSILLDNCKISDESDRYLVQRHLRPTPRVELGLALRAFSCCAIDISDGLLADLGHILERSQVGAEIELDNIPLSTHLMTKYSEKEALHFALTGGEDYELCFTVSDDKRSEMERILRSQGIKVSCIGRITPAASGLILRQNGKQVPLPTQSGFDHFKS
>NC_010278.1|WP_012262737.1|239166_239736_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MSELTHYIELKAIPQVDILQTDVIAHGLQILHKFLPLYQGEIGLSFPAYGLGRTLGGIIRVFGNEQHCTQIKTQLIGEGLQDYVLITSVTPVPEEIVEYHRYQRVHRKGQSAIRRTEQFLVQQGKWTEEIRQEMLIHQQNQKVFPYVKLKSGSTKQHFVLAIRQLRLAEPASGLFNAYGLSQAATVPHF
>NC_010278.1|WP_012262738.1|239738_240734_-|type-I-F-CRISPR-associated-protein-Csy3
MTKLTTASVLAFERKLDISDATFTQKNSTSSEPEIAVTIREKSVRGTISNRLKNALANDPAKLDAEIEKANLQRVDVATLNDDYDTLVARFTCKVLPFEGKPNVCNDPEYQAKLLSTIQNYLTVHGMSELAKRYATNLANARWLWRNRISAETIQVSIKVADDVIVFENAKQLPLNSFEQADEKLQKIASYIEKGLKGEEFIILEVEAQAKMGRGQEVYPSQELVLDTGTRKSKILYEINHKAGMHSQKIGNAIRTIDTWYAENAPFPIAVEPYGAVTNLGTAFRQPKEKIDFYTLFDNWVLKDVAPELEQQHYVISVLIRGGVFGASGKE
>NC_010278.1|WP_012262739.1|240735_241695_-|type-I-F-CRISPR-associated-protein-Csy2
MNYPNFYLLFDHVEIQAANTISSPITYGFPALTGFTGAIHALSRKLFSQQVELGGVMIACHDYQILGYKHSDFSDLTFNQTRNPLKKNGDSPSIIEEGKIHLDISLVVEMEVKDPEFYYALNSQDSEQKTQFLEHCKKLLMQQRIAGGSVFQIENVELFNLSEESEIKLALMPAFVLMDAKQILTDITQSLQNGISNNEIMIYPATPNANALDALLEVATLHHIPLSENATSQEWETFNVNQGKGWLVPIPVGYQAISPLFTAGEMQNCRTNEYPSQYVETVYSLGKWVFPFSLPDDLSQCFWHYNTPQDNLYLITQGA
>NC_010278.1|WP_005606943.1|241691_243041_-|type-I-F-CRISPR-associated-protein-Csy1
MITPLQIRAKIIDFLQAQHLKKSENDYKKLEKATEPEEIAKIKAEISKSEEKYRLDTWLHTAATEMAKQLKFGTHIAKGIHPDAKGNNINFRANLNLPATLVGSQLIDKLVLDANGNAAALPLAAFFDIMVDEVNKRTLKDLLLTDEPCLDGCFSDDHSLSAQYKIAFQMALKGNLNSPETHERNKQVLWVNSSSAIEDNHYTCLIPLYPSSFTHAIYNKLNQARFSEENKQARENRYKNKAQNPYISIPHLAATKLGGTKPQNVSLLTSKQGGRNYLLPSLPPIFTKGELRLTNAQDTIFNDRLAYVCRAGLYQLYQAVADSRKNYIVRVPRAEAVNLIVQMVLQQAYKLQKRTAGWSRDYQLAWCEKYWLDPQRAKLNGEEQFHSALTQQDWISEVEQRFAAWLNALLKKRFPKHQDDFTATEYNEWRKYFRKKLHRQLRCLYKEVL
>NC_010278.1|WP_005606946.1|243488_245420_+|threonine--tRNA-ligase
MPIITLPDGSQRQFDNPVSVMEVAQSIGAGLAKATIAGRVNGERRDACDIISEDSSLEIITAKDEDGLEIIRHSCAHLLGHAIKQLFPDVKMAIGPTIDNGFYYDVDLDRSLTQEDLDAIEKRMLELAKTNYDVVKKRVSWQEARDTFEKRGEPYKMAILDENIERTATPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRIYGTAWADKKQLAEYLTRLEEAAKRDHRRIGKALDLYHMQEEAPGLVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWERTGHWQNYADLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTSCIRMVYDIYSTFGFSNIQVKLSTRPENRIGDDAMWDRAEDGLAKALTANGLSYEIQEGEGAFYGPKIEFALRDCLDREWQCGTIQLDFALPGRLDASYVAEDNGRRTPVMIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNITDSQADYVQKVTKALSDAGIRAKSDLRNEKVGFKVREHTLRRVPYMLVCGDKEIEAGKVSVRTRKGADLGTFTIDEFVEILKNQVKARGLKLLGEE
>NC_010278.1|WP_005596031.1|245561_246236_+|CsgG/HfaB-family-protein
MKKLLMTTLCVTALGLAGCATEGSRAIAPTVTQAASTATNYHGVKSAISVGKFDNKSSFQNGVFSDGQDQLGNQSKTILVSHLQQTGRFSVLDRTNMSEAAAEAKIKGQKQNLKGATYVITGDVTEFGRKTVGDHQLFGILGRGKEQVAYAKVTLNVVNVNTSEVVYSVQGAGEYNLSNREVLGFGGTAGYDSTLNGKVLDLAIREAVNNLVNGIEAGHWTPAK
>NC_010278.1|WP_011848337.1|246245_246593_+|DUF4810-domain-containing-protein
MKKINIIMFALITVVLSACSSRSVDTNTYYWGNYSDLIYSYYNEPGDFTKQENGFNEIIKMAKDAQKPVAPGVYGHLGLVLLKQGKTAEAQNAFLQEQQLFPESKTFMQYLQRKK
>NC_010278.1|WP_005596036.1|246604_247264_+|DUF799-domain-containing-protein
MKKLLILLSGILFLSGCAQQQKPSYDYSALKESKPKSILVLLPVNNSVDVKADTSVLARVTYPLAELGYYVYPVALVDEVFKQNGLTDGNAIRSANIKKIYDIFGADSILYLNVDKYGTSYKVFDSVTEVELEGKLIDLKTGKTLWDGTGRFAEGSTHSNDGALVALVKAAVSQVVDTTKDKGYEVSASAMSSLVHVGKNGGLLVGPRHSLYGKEDVKK
>NC_010278.1|WP_080515067.1|247478_248021_+|translation-initiation-factor-IF-3
MKPVKRVQTNRAHRLNDEIRGVKEVRLTDENGEQVGIVSIQDALARAEDAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPGTDEGDYQIKLRSILRFLEDGDKVKITVRFRGREMAHQDIGLDVLDRVKTDTAEVAVVESAPGKLEGRQAVMVIAPKKK
>NC_010278.1|WP_005596065.1|248269_248467_+|50S-ribosomal-protein-L35
MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRHLRHKSMVAKADQVLVVACLPYA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_010278_1	1.31\|238785\|33\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238785-238817	33	NC_010278.1	1484005-1484037	0	1.0

1. spacer 1.31|238785|33|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to position: 1484005-1484037, mismatch: 0, identity: 1.0

tcgccataacacctccatgcgtgattttgcttt	CRISPR spacer
tcgccataacacctccatgcgtgattttgcttt	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	NC_021724	Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence	5571-5602	0	1.0
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	NC_021724	Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence	9153-9184	0	1.0
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	NC_002579	Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence	7010-7041	0	1.0
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	GQ866235	Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence	8621-8652	0	1.0
NC_010278_1	1.30\|238725\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238725-238756	32	NZ_KX753679	Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence	5026-5057	0	1.0
NC_010278_1	1.30\|238725\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238725-238756	32	NC_021724	Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence	1009-1040	0	1.0
NC_010278_1	1.30\|238725\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238725-238756	32	NC_002579	Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence	23948-23979	0	1.0
NC_010278_1	1.30\|238725\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238725-238756	32	GQ866235	Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence	89-120	0	1.0
NC_010278_1	1.21\|238184\|33\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238184-238216	33	GQ866234	Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S25, complete sequence	15671-15703	1	0.97
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	GQ866235	Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence	4601-4632	1	0.969
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	NZ_KX753679	Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence	71-102	1	0.969
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	NZ_KX753679	Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence	24799-24830	1	0.969
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	NZ_KX753679	Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence	26976-27007	1	0.969
NC_010278_1	1.16\|237882\|33\|NC_010278\|CRISPRCasFinder,CRT	237882-237914	33	NC_004846	Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence	5659-5691	2	0.939
NC_010278_1	1.16\|237882\|33\|NC_010278\|CRISPRCasFinder,CRT	237882-237914	33	NC_004058	Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence	5659-5691	2	0.939
NC_010278_1	1.24\|238365\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238365-238396	32	GQ866234	Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S25, complete sequence	20919-20950	2	0.938
NC_010278_1	1.29\|238665\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238665-238696	32	NC_002579	Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence	2978-3009	2	0.938
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_LT904879	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2	133096-133127	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_KX129784	Escherichia coli strain H226B plasmid pH226B, complete sequence	18282-18313	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_009981	Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence	17822-17853	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029645	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence	78287-78318	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP026242	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence	256371-256402	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029729	Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence	149829-149860	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	16533-16564	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP026790	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence	163004-163035	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP039717	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence	107740-107771	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP009883	Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence	94237-94268	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP010380	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence	14373-14404	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP026171	Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence	323294-323325	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	KP899803	Salmonella enterica strain 8025 plasmid p8025, complete sequence	140330-140361	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	KP899804	Salmonella enterica strain F8475 plasmid pF8475, complete sequence	97863-97894	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	KP899805	Salmonella enterica strain 109/9 plasmid p109/9, complete sequence	88867-88898	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	KP899806	Salmonella enterica strain B71 plasmid pB71, complete sequence	72228-72259	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP026196	Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence	227835-227866	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP037875	Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence	147527-147558	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP018652	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence	161065-161096	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	CP009869	Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence	343004-343035	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	MN232190	Escherichia coli plasmid pGD27-31, complete sequence	122526-122557	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	41131-41162	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029690	Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence	32963-32994	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_003384	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence	74523-74554	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP030182	Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence	16532-16563	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP049354	Escherichia coli strain T28R plasmid pT28R-1, complete sequence	16536-16567	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP023167	Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence	19873-19904	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	AP020333	Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome	46635-46666	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP039559	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence	106687-106718	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP037911	Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence	32952-32983	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP046717	Escherichia coli strain T16R plasmid pT16R-1, complete sequence	16536-16567	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP026208	Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence	138996-139027	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	238229-238260	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP026391	Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence	95238-95269	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029142	Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence	169048-169079	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	118322-118353	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	MN256759	Escherichia coli strain 4M9F plasmid p4M9F, complete sequence	94100-94131	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP046007	Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence	53667-53698	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_002305	Salmonella typhi plasmid R27, complete sequence	7525-7556	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP046004	Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence	205811-205842	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP024236	Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence	161307-161338	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029895	Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence	78604-78635	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029877	Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence	78604-78635	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP033094	Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence	144620-144651	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	LT905061	Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2	138373-138404	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029926	Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence	20641-20672	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029947	Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence	79837-79868	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	270317-270348	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	98248-98279	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP044968	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence	208195-208226	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP044958	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence	140433-140464	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029943	Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence	78391-78422	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029953	Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence	78604-78635	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029955	Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence	78604-78635	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP022495	Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence	109624-109655	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP016184	Escherichia coli strain EC2 plasmid pEC2-4, complete sequence	86400-86431	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP016183	Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence	56181-56212	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029924	Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence	162550-162581	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029934	Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence	78604-78635	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	118322-118353	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_013365	Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence	32912-32943	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP041449	Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence	16536-16567	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029939	Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence	77222-77253	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_019360	Citrobacter freundii plasmid pNDM-CIT, complete sequence	252346-252377	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029957	Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence	78287-78318	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029941	Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence	78604-78635	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029910	Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence	78604-78635	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	KY320277	Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence	49412-49443	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029887	Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence	78338-78369	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029948	Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence	78604-78635	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029937	Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence	78075-78106	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029879	Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence	78287-78318	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP044111	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2	294861-294892	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP018656	Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence	44221-44252	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_016825	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence	28563-28594	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029931	Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence	78235-78266	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP029935	Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence	78129-78160	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_LT985296	Escherichia coli strain 1454 plasmid RCS78_p, complete sequence	151452-151483	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_MN101858	Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence	34039-34070	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_MN101856	Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence	32655-32686	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_MH733010	Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence	140658-140689	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	180575-180606	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_MG904992	Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence	65853-65884	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_MG948335	Escherichia coli strain 3498 plasmid p3498, complete sequence	46424-46455	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_023277	Escherichia coli strain 63743 plasmid pEQ2, complete sequence	18281-18312	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_023289	Escherichia coli strain T23 plasmid pEQ1, complete sequence	18333-18364	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	MT219824	Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence	60968-60999	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_MF072964	Citrobacter freundii strain P10159 plasmid pP10159-4, complete sequence	32053-32084	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	MG874042	Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence	157053-157084	5	0.844
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP013227	Staphylococcus aureus strain UTSW MRSA 55 plasmid UTSW55_1, complete sequence	1704-1735	5	0.844
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_008193	Pasteurella phage F108, complete genome	9016-9047	5	0.844
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	DQ114220	Bacteriophage F108, complete genome	9016-9047	5	0.844
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	GU949551	Clostridium phage phiCD6356, complete genome	13554-13585	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP009062	Borreliella afzelii K78 plasmid lp28-1, complete sequence	1794-1825	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_017412	Borreliella burgdorferi JD1 plasmid JD1 lp28-7, complete sequence	3000-3031	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_017420	Borreliella burgdorferi N40 plasmid N40_lp25, complete sequence	2011-2042	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP028879	Borreliella bavariensis PBi plasmid lp28-9, complete sequence	26614-26645	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015804	Borrelia mayonii strain MN14-1539 plasmid lp25	2010-2041	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP017212	Borreliella burgdorferi strain B331 plasmid B331_lp25, complete sequence	2018-2049	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP017215	Borreliella burgdorferi strain B331 plasmid B331_lp28_6, complete sequence	26227-26258	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015789	Borrelia mayonii strain MN14-1420 plasmid lp25, complete sequence	2010-2041	6	0.812
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MN692977	Marine virus AFVG_117M37, complete genome	38610-38641	6	0.812
NC_010278_1	1.26\|238485\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238485-238516	32	NZ_CP044536	Borrelia sp. CA690 plasmid lp54, complete sequence	2266-2297	6	0.812
NC_010278_1	1.3\|237102\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237102-237133	32	NZ_CP035190	Bacillus licheniformis strain SRCM103914 plasmid unnamed2, complete sequence	11929-11960	7	0.781
NC_010278_1	1.6\|237282\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237282-237313	32	NC_048639	Pseudomonas phage ZC08, complete genome	27592-27623	7	0.781
NC_010278_1	1.6\|237282\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237282-237313	32	NC_048638	Pseudomonas phage ZC03, complete genome	27435-27466	7	0.781
NC_010278_1	1.7\|237342\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237342-237373	32	NC_015511	Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY01, complete sequence	120902-120933	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP024406	Borrelia miyamotoi strain Izh-4 plasmid pIzh4-13	6206-6237	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP024329	Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-10	5357-5388	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP009064	Borreliella afzelii K78 plasmid lp28-3, complete sequence	14193-14224	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP024213	Borrelia miyamotoi strain Izh-5 plasmid pIzh5-6	6203-6234	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP024344	Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-9	6802-6833	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP018746	Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed1	19673-19704	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_011783	Borreliella burgdorferi ZS7 plasmid ZS7_lp25, complete sequence	1961-1992	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_018989	Borrelia burgdorferi 297 plasmid 297_lp28-5, complete sequence	8710-8741	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_018991	Borrelia burgdorferi 297 plasmid 297_lp38, complete sequence	136-167	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_017406	Borreliella burgdorferi JD1 plasmid JD1 lp28-5, complete sequence	8727-8758	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_015916	Borreliella bissettii DN127 plasmid lp28-3, complete sequence	9832-9863	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_017413	Borreliella burgdorferi JD1 plasmid JD1 lp38, complete sequence	1847-1878	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_015920	Borreliella bissettii DN127 plasmid lp56, complete sequence	1710-1741	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP024401	Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp64, complete sequence	57847-57878	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP031409	Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence	1644-1675	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP024367	Borrelia miyamotoi strain Izh-16 plasmid pIzh16-12	6181-6212	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP028865	Borreliella garinii strain 20047 plasmid lp36, complete sequence	17324-17355	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_001850	Borreliella burgdorferi B31 plasmid lp25, complete sequence	1936-1967	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015803	Borrelia mayonii strain MN14-1539 plasmid lp17	1944-1975	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015807	Borrelia mayonii strain MN14-1539 plasmid lp28-4	30245-30276	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015808	Borrelia mayonii strain MN14-1539 plasmid lp36	27249-27280	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP017213	Borreliella burgdorferi strain B331 plasmid B331_lp28_3, complete sequence	4140-4171	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015788	Borrelia mayonii strain MN14-1420 plasmid lp17, complete sequence	1944-1975	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015792	Borrelia mayonii strain MN14-1420 plasmid lp28-4, complete sequence	30270-30301	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015793	Borrelia mayonii strain MN14-1420 plasmid lp36, complete sequence	27249-27280	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP024387	Borrelia miyamotoi strain Izh-14 plasmid pIzh14-12	6785-6816	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_017235	Borreliella afzelii PKo plasmid lp28-7, complete sequence	3046-3077	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP032533	Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence	45569-45600	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP010112	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence	255691-255722	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP015730	Bacillus cereus strain A1 plasmid pBCA1, complete sequence	206973-207004	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP019924	Borreliella burgdorferi strain PAbe plasmid p_lp36, complete sequence	2814-2845	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_011778	Borreliella burgdorferi ZS7 plasmid ZS7_lp36, complete sequence	2814-2845	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_001855	Borreliella burgdorferi B31 plasmid lp36, complete sequence	2814-2845	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP019852	Borreliella burgdorferi plasmid lp36, complete sequence	2682-2713	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP019763	Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp36, complete sequence	2748-2779	7	0.781
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	LC215275	Legionella pneumophila plasmid pOfk55 DNA, complete sequence, strain: Ofk308	2389-2420	7	0.781
NC_010278_1	1.21\|238184\|33\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238184-238216	33	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	865138-865170	7	0.788
NC_010278_1	1.25\|238425\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238425-238456	32	NC_007206	Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence	487-518	7	0.781
NC_010278_1	1.25\|238425\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238425-238456	32	NC_007206	Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence	6696-6727	7	0.781
NC_010278_1	1.25\|238425\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238425-238456	32	NC_007206	Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence	32394-32425	7	0.781
NC_010278_1	1.27\|238545\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238545-238576	32	NZ_CP040085	Acinetobacter baumannii strain VB33071 plasmid unnamed1, complete sequence	1191-1222	7	0.781
NC_010278_1	1.27\|238545\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238545-238576	32	NZ_CP016590	Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence	232222-232253	7	0.781
NC_010278_1	1.3\|237102\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237102-237133	32	U88974	Streptococcus thermophilus temperate bacteriophage O1205, complete genome	1679-1710	8	0.75
NC_010278_1	1.3\|237102\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237102-237133	32	NC_004303	Streptococcus phage O1205, complete genome	1679-1710	8	0.75
NC_010278_1	1.3\|237102\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237102-237133	32	NZ_CP014308	Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence	295081-295112	8	0.75
NC_010278_1	1.3\|237102\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237102-237133	32	NZ_CP014309	Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence	540023-540054	8	0.75
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_016748	Marinitoga piezophila KA3 plasmid pMARPI01, complete sequence	4775-4806	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_011775	Bacillus cereus G9842 plasmid pG9842_209, complete sequence	108000-108031	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP020859	Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence	102901-102932	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_LT604075	Lactobacillus salivarius isolate LPM01 plasmid II	85658-85689	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP018750	Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence	893-924	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	184061-184092	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP028867	Borreliella garinii strain 20047 plasmid cp26, complete sequence	24885-24916	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_017725	Borreliella garinii BgVir plasmid cp26, complete sequence	24299-24330	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_017233	Borreliella afzelii PKo plasmid lp28-3, complete sequence	9695-9726	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	AP014444	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S32-C76, * SEQUENCING IN PROGRESS *, 4 ordered pieces	17032-17063	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	AP013490	Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C30B-MedDCM-OCT-S46-C80	14610-14641	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	AP013767	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S31-C145, * SEQUENCING IN PROGRESS *	7965-7996	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	AP013770	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S41-C83, * SEQUENCING IN PROGRESS *	18547-18578	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	AP013769	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S39-C146, * SEQUENCING IN PROGRESS *	1644-1675	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MT774382	CrAssphage cr10_1, complete genome	6828-6859	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MN694427	Marine virus AFVG_250M959, complete genome	19713-19744	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MN694358	Marine virus AFVG_250M310, complete genome	23502-23533	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MK448993	Streptococcus phage Javan616, complete genome	7493-7524	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MN693923	Marine virus AFVG_250M958, complete genome	33516-33547	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	AP013766	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S30-C97, * SEQUENCING IN PROGRESS *	6639-6670	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP012498	Escherichia coli strain 06-00048 plasmid pCFSAN004178P_02, complete sequence	9241-9272	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP012500	Escherichia coli strain 09-00049 plasmid pCFSAN004180G, complete sequence	155204-155235	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP012501	Escherichia coli strain 08-00022 plasmid pCFSAN004179G, complete sequence	167571-167602	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	122692-122723	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP042296	Escherichia coli strain RM9088 plasmid p1RM9088, complete sequence	34854-34885	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP012499	Escherichia coli strain GB089 plasmid pCFSAN004181P, complete sequence	29627-29658	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	KX229736	Campylobacter phage PC5, complete genome	22899-22930	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MH107028	Campylobacter phage CP39, partial genome	14514-14545	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NC_015464	Campylobacter phage NCTC12673, complete genome	126660-126691	8	0.75
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	KX236333	Campylobacter phage PC14, complete genome	26617-26648	8	0.75
NC_010278_1	1.23\|238305\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238305-238336	32	NZ_AP019532	Serratia symbiotica strain IS plasmid pSsyis1, complete sequence	60983-61014	8	0.75
NC_010278_1	1.25\|238425\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238425-238456	32	NC_004846	Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence	5290-5321	8	0.75
NC_010278_1	1.25\|238425\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238425-238456	32	NC_004846	Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence	32200-32231	8	0.75
NC_010278_1	1.25\|238425\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238425-238456	32	NC_004058	Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence	5290-5321	8	0.75
NC_010278_1	1.25\|238425\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238425-238456	32	NC_004058	Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence	32146-32177	8	0.75
NC_010278_1	1.26\|238485\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238485-238516	32	CP009912	Borreliella chilensis strain VA1 plasmid lp54, complete sequence	3896-3927	8	0.75
NC_010278_1	1.26\|238485\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238485-238516	32	NZ_CP032535	Bacillus megaterium NCT-2 plasmid pNCT2_7, complete sequence	28890-28921	8	0.75
NC_010278_1	1.26\|238485\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238485-238516	32	MH572298	Microviridae sp. isolate SD_SC_87, complete genome	3527-3558	8	0.75
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NZ_CP017081	Bacillus muralis strain G25-68 plasmid pG25-68, complete sequence	10970-11001	8	0.75
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NC_014249	'Nostoc azollae' 0708 plasmid pAzo01, complete sequence	63730-63761	8	0.75
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NC_018486	Bacillus thuringiensis HD-771 plasmid p01, complete sequence	32448-32479	8	0.75
NC_010278_1	1.33\|238906\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238906-238937	32	MN856077	Bacteriophage sp. isolate 40, complete genome	33613-33644	8	0.75
NC_010278_1	1.3\|237102\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237102-237133	32	NZ_CP012031	Leptospira borgpetersenii serovar Ballum strain 56604 plasmid lbp1, complete sequence	45428-45459	9	0.719
NC_010278_1	1.3\|237102\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237102-237133	32	MK448980	Streptococcus phage Javan536, complete genome	1612-1643	9	0.719
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NC_019774	Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence	53597-53628	9	0.719
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP026601	Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence	115841-115872	9	0.719
NC_010278_1	1.12\|237642\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237642-237673	32	NZ_CP048880	Oceanospirillales bacterium S2-4-1H plasmid pB, complete sequence	61047-61078	9	0.719
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP024377	Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp23, complete sequence	5216-5247	9	0.719
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MN692979	Marine virus AFVG_117M14, complete genome	11753-11784	9	0.719
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	MN693448	Marine virus AFVG_25M325, complete genome	11850-11881	9	0.719
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP035135	Lactobacillus plantarum strain SRCM103311 plasmid unnamed4	60015-60046	9	0.719
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_MG205643	Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence	63023-63054	9	0.719
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	KY744230	Sulfolobus islandicus rod-shaped virus 10, partial genome	3614-3645	9	0.719
NC_010278_1	1.24\|238365\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238365-238396	32	NZ_CP046163	Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence	1376140-1376171	9	0.719
NC_010278_1	1.24\|238365\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238365-238396	32	NZ_CP046066	Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence	1559532-1559563	9	0.719
NC_010278_1	1.24\|238365\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238365-238396	32	NZ_CP045356	Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence	200377-200408	9	0.719
NC_010278_1	1.24\|238365\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238365-238396	32	NZ_CP049202	Escherichia coli strain PapRG-04-4 plasmid pIncFIB, complete sequence	58124-58155	9	0.719
NC_010278_1	1.26\|238485\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238485-238516	32	MG869626	Polaromonas sp. W5N plasmid pW5NP1, complete sequence	7116-7147	9	0.719
NC_010278_1	1.26\|238485\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238485-238516	32	NZ_LR134432	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 23	26128-26159	9	0.719
NC_010278_1	1.27\|238545\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238545-238576	32	NZ_CP020945	Pantoea ananatis strain PNA 97-1R plasmid unamed2, complete sequence	89400-89431	9	0.719
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NZ_CP047429	Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence	109177-109208	9	0.719
NC_010278_1	1.33\|238906\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238906-238937	32	MT774380	CrAssphage cr1_1, complete genome	90216-90247	9	0.719
NC_010278_1	1.2\|237042\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237042-237073	32	NZ_CP019039	Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence	3941-3972	10	0.688
NC_010278_1	1.3\|237102\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237102-237133	32	MG516909	Escherichia coli plasmid pEc1675, complete sequence	9506-9537	10	0.688
NC_010278_1	1.4\|237162\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237162-237193	32	NZ_CP031066	Bacillus sp. SH8-8 plasmid pl193, complete sequence	89854-89885	10	0.688
NC_010278_1	1.4\|237162\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237162-237193	32	NZ_CP031063	Bacillus sp. AR4-2 plasmid pl192, complete sequence	89854-89885	10	0.688
NC_010278_1	1.7\|237342\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237342-237373	32	MK250021	Prevotella phage Lak-B2, complete genome	360244-360275	10	0.688
NC_010278_1	1.7\|237342\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237342-237373	32	MK250024	Prevotella phage Lak-B5, complete genome	354220-354251	10	0.688
NC_010278_1	1.7\|237342\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237342-237373	32	MK250028	Prevotella phage Lak-B9, complete genome	359110-359141	10	0.688
NC_010278_1	1.7\|237342\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237342-237373	32	MK250025	Prevotella phage Lak-B6, complete genome	357772-357803	10	0.688
NC_010278_1	1.7\|237342\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237342-237373	32	MK250022	Prevotella phage Lak-B3, complete genome	357863-357894	10	0.688
NC_010278_1	1.7\|237342\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237342-237373	32	MK250020	Prevotella phage Lak-B1, complete genome	359093-359124	10	0.688
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP043635	Empedobacter brevis strain SE1-3 plasmid pSE1-3-9kb, complete sequence	6008-6039	10	0.688
NC_010278_1	1.8\|237402\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237402-237433	32	NZ_CP041287	Acinetobacter indicus strain 94-2 plasmid p94-2-p4, complete sequence	2341-2372	10	0.688
NC_010278_1	1.11\|237582\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	237582-237613	32	MN693765	Marine virus AFVG_250M576, complete genome	33196-33227	10	0.688
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	306561-306592	10	0.688
NC_010278_1	1.18\|238004\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238004-238035	32	NZ_CP019368	Borrelia turicatae 91E135 isolate Oz1 plasmid lpT39, complete sequence	9718-9749	10	0.688
NC_010278_1	1.24\|238365\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238365-238396	32	NC_015579	Novosphingobium sp. PP1Y plasmid Lpl, complete sequence	67468-67499	10	0.688
NC_010278_1	1.26\|238485\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238485-238516	32	MN693029	Marine virus AFVG_117M56, complete genome	19524-19555	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NZ_CP040783	Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence	368102-368133	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	109375-109406	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NZ_CP023246	Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence	47815-47846	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	122293-122324	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	NC_019507	Campylobacter phage CP21, complete genome	101693-101724	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	MT932329	Campylobacter phage F379, complete genome	165026-165057	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	MG592671	Vibrio phage 2.275.O._10N.286.54.E11, partial genome	198616-198647	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	MK408758	Campylobacter phage CP20, complete genome	9250-9281	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	HE815464	Campylobacter phage CP21 complete sequence	101693-101724	10	0.688
NC_010278_1	1.28\|238605\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238605-238636	32	FN667789	Campylobacter phage CPt10, complete genome	9250-9281	10	0.688
NC_010278_1	1.33\|238906\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238906-238937	32	NZ_CP017407	Lactobacillus plantarum strain RI-113 plasmid pRI113_1, complete sequence	39761-39792	10	0.688
NC_010278_1	1.33\|238906\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238906-238937	32	NZ_CP028279	Lactobacillus plantarum strain SRCM100995 plasmid unnamed4, complete sequence	8043-8074	10	0.688
NC_010278_1	1.20\|238124\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238124-238155	32	CP031730	Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence	314376-314407	11	0.656
NC_010278_1	1.26\|238485\|32\|NC_010278\|CRISPRCasFinder,CRT,PILER-CR	238485-238516	32	NC_009726	Coxiella burnetii Dugway 5J108-111 plasmid pQpDG, complete sequence	8685-8716	11	0.656

1. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_021724 (Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence) position: , mismatch: 0, identity: 1.0

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcatgtgcttatcaa	Protospacer
********************************

2. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_021724 (Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence) position: , mismatch: 0, identity: 1.0

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcatgtgcttatcaa	Protospacer
********************************

3. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_002579 (Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence) position: , mismatch: 0, identity: 1.0

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcatgtgcttatcaa	Protospacer
********************************

4. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to GQ866235 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence) position: , mismatch: 0, identity: 1.0

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcatgtgcttatcaa	Protospacer
********************************

5. spacer 1.30|238725|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcaaacgtcacccctttacaacaccaggt	CRISPR spacer
gtttcaaacgtcacccctttacaacaccaggt	Protospacer
********************************

6. spacer 1.30|238725|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_021724 (Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcaaacgtcacccctttacaacaccaggt	CRISPR spacer
gtttcaaacgtcacccctttacaacaccaggt	Protospacer
********************************

7. spacer 1.30|238725|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_002579 (Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcaaacgtcacccctttacaacaccaggt	CRISPR spacer
gtttcaaacgtcacccctttacaacaccaggt	Protospacer
********************************

8. spacer 1.30|238725|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to GQ866235 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcaaacgtcacccctttacaacaccaggt	CRISPR spacer
gtttcaaacgtcacccctttacaacaccaggt	Protospacer
********************************

9. spacer 1.21|238184|33|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to GQ866234 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S25, complete sequence) position: , mismatch: 1, identity: 0.97

agttcgccccctgatcctgttccttttccaaag	CRISPR spacer
agttcgccccctgatcctgttccttttccaaaa	Protospacer
********************************.

10. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to GQ866235 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence) position: , mismatch: 1, identity: 0.969

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcctgtgcttatcaa	Protospacer
******************* ************

11. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 1, identity: 0.969

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcctgtgcttatcaa	Protospacer
******************* ************

12. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 1, identity: 0.969

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcctgtgcttatcaa	Protospacer
******************* ************

13. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 1, identity: 0.969

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcctgtgcttatcaa	Protospacer
******************* ************

14. spacer 1.16|237882|33|NC_010278|CRISPRCasFinder,CRT matches to NC_004846 (Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence) position: , mismatch: 2, identity: 0.939

atgataaactgatcactttatttgcttctcaag	CRISPR spacer
atgataaactgattactttatttgcctctcaag	Protospacer
*************.***********.*******

15. spacer 1.16|237882|33|NC_010278|CRISPRCasFinder,CRT matches to NC_004058 (Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence) position: , mismatch: 2, identity: 0.939

atgataaactgatcactttatttgcttctcaag	CRISPR spacer
atgataaactgattactttatttgcctctcaag	Protospacer
*************.***********.*******

16. spacer 1.24|238365|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to GQ866234 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S25, complete sequence) position: , mismatch: 2, identity: 0.938

gattgccattgcaacacgggcaatttggcata	CRISPR spacer
aattgccattacaacacgggcaatttggcata	Protospacer
.*********.*********************

17. spacer 1.29|238665|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_002579 (Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence) position: , mismatch: 2, identity: 0.938

cagtttaagaaatttgctcatgtgcttatcaa	CRISPR spacer
cagtttaagaaatttgctcttgtgcttgtcaa	Protospacer
******************* *******.****

18. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

19. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

20. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_009981 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pMAK1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

21. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

22. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026242 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

23. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

24. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

25. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026790 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

26. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039717 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS000211 plasmid p10-3184.1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

27. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009883 (Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

28. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

29. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026171 (Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

30. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to KP899803 (Salmonella enterica strain 8025 plasmid p8025, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

31. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to KP899804 (Salmonella enterica strain F8475 plasmid pF8475, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

32. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to KP899805 (Salmonella enterica strain 109/9 plasmid p109/9, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

33. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to KP899806 (Salmonella enterica strain B71 plasmid pB71, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

34. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026196 (Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

35. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037875 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S2, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

36. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

37. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

38. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN232190 (Escherichia coli plasmid pGD27-31, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

39. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

40. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029690 (Escherichia coli strain SD134209 plasmid pSD134209-1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

41. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_003384 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

42. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030182 (Salmonella enterica strain SA20030575 plasmid pSA20030575.1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

43. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049354 (Escherichia coli strain T28R plasmid pT28R-1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

44. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023167 (Salmonella enterica subsp. enterica serovar Saintpaul strain SGB23 plasmid pSGB23, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

45. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to AP020333 (Salmonella enterica SESen3709 plasmid pSESen3709_1 DNA, complete genome) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

46. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039559 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

47. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037911 (Escherichia coli strain YSP8-1 plasmid pYSP8-1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

48. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046717 (Escherichia coli strain T16R plasmid pT16R-1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

49. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026208 (Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

50. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

51. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026391 (Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

52. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

53. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

54. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN256759 (Escherichia coli strain 4M9F plasmid p4M9F, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

55. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046007 (Escherichia coli strain 1919D62 plasmid p1919D62-1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

56. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

57. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046004 (Escherichia coli strain 1919D3 plasmid p1919D3-1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

58. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

59. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

60. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

61. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033094 (Escherichia coli strain CP53 plasmid pCP53-mcr, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

62. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

63. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

64. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

65. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

66. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

67. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044968 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS014881.1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

68. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044958 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

69. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

70. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

71. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

72. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022495 (Salmonella enterica subsp. enterica serovar Derby strain SA20035215 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

73. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016184 (Escherichia coli strain EC2 plasmid pEC2-4, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

74. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016183 (Escherichia coli strain EC2_1 plasmid pEC2_1-4, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

75. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

76. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

77. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

78. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_013365 (Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

79. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041449 (Escherichia coli strain YPE10 plasmid pYPE10-190k-tetX4, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

80. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

81. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_019360 (Citrobacter freundii plasmid pNDM-CIT, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

82. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

83. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

84. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

85. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to KY320277 (Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

86. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

87. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

88. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

89. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

90. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044111 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

91. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

92. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

93. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

94. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

95. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT985296 (Escherichia coli strain 1454 plasmid RCS78_p, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

96. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN101858 (Escherichia coli strain 2019XSD11-TC2 plasmid p2019XSD11-TC2-284, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

97. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MN101856 (Escherichia coli strain 2019XSD11 plasmid p2019XSD11-190, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

98. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH733010 (Klebsiella pneumoniae strain KP14812 plasmid pKP14812-MCR-1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

99. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

100. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG904992 (Escherichia coli strain 14OD0056 plasmid p14ODMR, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

101. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG948335 (Escherichia coli strain 3498 plasmid p3498, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

102. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_023277 (Escherichia coli strain 63743 plasmid pEQ2, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

103. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_023289 (Escherichia coli strain T23 plasmid pEQ1, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

104. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

105. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF072964 (Citrobacter freundii strain P10159 plasmid pP10159-4, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

106. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MG874042 (Salmonella sp. strain Sa4 plasmid pSa4-CIP, complete sequence) position: , mismatch: 5, identity: 0.844

-ctaactgttttagatttttgatttcattgata	CRISPR spacer
gctgact-ttttcgatttttgatgtcattgatg	Protospacer
 **.*** **** ********** ********.

107. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013227 (Staphylococcus aureus strain UTSW MRSA 55 plasmid UTSW55_1, complete sequence) position: , mismatch: 5, identity: 0.844

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttcgattaatttcttgtatttcttgtttatct	Protospacer
*   *********** *****.**********

108. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_008193 (Pasteurella phage F108, complete genome) position: , mismatch: 5, identity: 0.844

tgatatta-atttcttctattttttgtttatct	CRISPR spacer
-gatttaacatttctcttattttttgtttatct	Protospacer
 *** * * ******..****************

109. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to DQ114220 (Bacteriophage F108, complete genome) position: , mismatch: 5, identity: 0.844

tgatatta-atttcttctattttttgtttatct	CRISPR spacer
-gatttaacatttctcttattttttgtttatct	Protospacer
 *** * * ******..****************

110. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 6, identity: 0.812

ctaactgtt--ttagatttttgatttcattgata	CRISPR spacer
--tactatcaattagatttttgatttcatttata	Protospacer
   ***.*.  ******************* ***

111. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009062 (Borreliella afzelii K78 plasmid lp28-1, complete sequence) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttttaattttttctattttttctttatct	Protospacer
   * *******.*********** *******

112. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_017412 (Borreliella burgdorferi JD1 plasmid JD1 lp28-7, complete sequence) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttttaattttttctattttttctttatct	Protospacer
   * *******.*********** *******

113. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_017420 (Borreliella burgdorferi N40 plasmid N40_lp25, complete sequence) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttttaattttttctattttttctttatct	Protospacer
   * *******.*********** *******

114. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028879 (Borreliella bavariensis PBi plasmid lp28-9, complete sequence) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttttaattttttctattttttctttatct	Protospacer
   * *******.*********** *******

115. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015804 (Borrelia mayonii strain MN14-1539 plasmid lp25) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttttaattttttctattttttctttatct	Protospacer
   * *******.*********** *******

116. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017212 (Borreliella burgdorferi strain B331 plasmid B331_lp25, complete sequence) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttttaattttttctattttttctttatct	Protospacer
   * *******.*********** *******

117. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017215 (Borreliella burgdorferi strain B331 plasmid B331_lp28_6, complete sequence) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttttaattttttctattttttctttatct	Protospacer
   * *******.*********** *******

118. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015789 (Borrelia mayonii strain MN14-1420 plasmid lp25, complete sequence) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttttaattttttctattttttctttatct	Protospacer
   * *******.*********** *******

119. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN692977 (Marine virus AFVG_117M37, complete genome) position: , mismatch: 6, identity: 0.812

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttttattaattacttttattttttgtttacgt	Protospacer
*  ******** ***.*************. *

120. spacer 1.26|238485|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044536 (Borrelia sp. CA690 plasmid lp54, complete sequence) position: , mismatch: 6, identity: 0.812

acgaagtttttaaccatttgctttttttaact	CRISPR spacer
tagtagtttttaaccactagctttttttaatt	Protospacer
  * ************.* ***********.*

121. spacer 1.3|237102|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035190 (Bacillus licheniformis strain SRCM103914 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

gcttgagatttcattttctcctttttctcaaa	CRISPR spacer
agctggaatttcattttctcctatttctgaaa	Protospacer
. .**..*************** ***** ***

122. spacer 1.6|237282|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_048639 (Pseudomonas phage ZC08, complete genome) position: , mismatch: 7, identity: 0.781

atgaggtaataaatggaaaacgactacatagc--	CRISPR spacer
atgaggtaagacatggaaaacga--agatgactt	Protospacer
********* * ***********  * **..*

123. spacer 1.6|237282|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_048638 (Pseudomonas phage ZC03, complete genome) position: , mismatch: 7, identity: 0.781

atgaggtaataaatggaaaacgactacatagc--	CRISPR spacer
atgaggtaagacatggaaaacga--agatgactt	Protospacer
********* * ***********  * **..*

124. spacer 1.7|237342|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_015511 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY01, complete sequence) position: , mismatch: 7, identity: 0.781

acgataatgaaatcaggcaaacataaaaaaat	CRISPR spacer
aagaggaagaaatcaggcaaaaatgaaaaaac	Protospacer
* ** .* ************* **.******.

125. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024406 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-13) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

126. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024329 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-10) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

127. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009064 (Borreliella afzelii K78 plasmid lp28-3, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
cttttctaattttttctattttttctttatct	Protospacer
.  * .******.*********** *******

128. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024213 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-6) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

129. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024344 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-9) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

130. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018746 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed1) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

131. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_011783 (Borreliella burgdorferi ZS7 plasmid ZS7_lp25, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

132. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_018989 (Borrelia burgdorferi 297 plasmid 297_lp28-5, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttttttatct	Protospacer
   * .******.*********** *******

133. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_018991 (Borrelia burgdorferi 297 plasmid 297_lp38, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

134. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_017406 (Borreliella burgdorferi JD1 plasmid JD1 lp28-5, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

135. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_015916 (Borreliella bissettii DN127 plasmid lp28-3, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

136. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_017413 (Borreliella burgdorferi JD1 plasmid JD1 lp38, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

137. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_015920 (Borreliella bissettii DN127 plasmid lp56, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

138. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024401 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp64, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

139. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031409 (Borreliella burgdorferi strain MM1 plasmid plsm_lp28-8, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

140. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024367 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-12) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

141. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028865 (Borreliella garinii strain 20047 plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

142. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_001850 (Borreliella burgdorferi B31 plasmid lp25, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

143. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015803 (Borrelia mayonii strain MN14-1539 plasmid lp17) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
atttcctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

144. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015807 (Borrelia mayonii strain MN14-1539 plasmid lp28-4) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

145. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015808 (Borrelia mayonii strain MN14-1539 plasmid lp36) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

146. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017213 (Borreliella burgdorferi strain B331 plasmid B331_lp28_3, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttttttatct	Protospacer
   * .******.*********** *******

147. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015788 (Borrelia mayonii strain MN14-1420 plasmid lp17, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
atttcctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

148. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015792 (Borrelia mayonii strain MN14-1420 plasmid lp28-4, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

149. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015793 (Borrelia mayonii strain MN14-1420 plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

150. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024387 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-12) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

151. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_017235 (Borreliella afzelii PKo plasmid lp28-7, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttatct	Protospacer
   * .******.*********** *******

152. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttcttttaagttcttctattctttgtttacgt	Protospacer
*  * **** **********.********. *

153. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
taatattaatttctactagtttttgtaaacat	Protospacer
*.************ *** *******  *. *

154. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015730 (Bacillus cereus strain A1 plasmid pBCA1, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tcatattaatttctactagtttttgtaaacat	Protospacer
* ************ *** *******  *. *

155. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019924 (Borreliella burgdorferi strain PAbe plasmid p_lp36, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttttctaatttttttctattttttctttatct	Protospacer
*  * * * ***.*********** *******

156. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_011778 (Borreliella burgdorferi ZS7 plasmid ZS7_lp36, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttttctaatttttttctattttttctttatct	Protospacer
*  * * * ***.*********** *******

157. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_001855 (Borreliella burgdorferi B31 plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttttctaatttttttctattttttctttatct	Protospacer
*  * * * ***.*********** *******

158. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019852 (Borreliella burgdorferi plasmid lp36, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttttctaatttttttctattttttctttatct	Protospacer
*  * * * ***.*********** *******

159. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019763 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp36, complete sequence) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttttctaatttttttctattttttctttatct	Protospacer
*  * * * ***.*********** *******

160. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to LC215275 (Legionella pneumophila plasmid pOfk55 DNA, complete sequence, strain: Ofk308) position: , mismatch: 7, identity: 0.781

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tttttttaatttcatttattttttgtttcttt	Protospacer
*  * ******** *.************ *.*

161. spacer 1.21|238184|33|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 7, identity: 0.788

agttcgccccctgatcctgttccttttccaaag	CRISPR spacer
agaagtactcctgatcctgttcctattccaaag	Protospacer
**     *.*************** ********

162. spacer 1.25|238425|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_007206 (Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence) position: , mismatch: 7, identity: 0.781

gttatagttaagtcgtcatctcgtccttaact	CRISPR spacer
tggttggttaagtcgtcttttcgtccttaact	Protospacer
    *.*********** *.************

163. spacer 1.25|238425|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_007206 (Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence) position: , mismatch: 7, identity: 0.781

gttatagttaagtcgtcatctcgtccttaact	CRISPR spacer
tggttggttaagtcgtcttttcgtccttaact	Protospacer
    *.*********** *.************

164. spacer 1.25|238425|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_007206 (Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence) position: , mismatch: 7, identity: 0.781

gttatagttaagtcgtcatctcgtccttaact	CRISPR spacer
tggttggttaagtcgtcttttcgtccttaact	Protospacer
    *.*********** *.************

165. spacer 1.27|238545|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040085 (Acinetobacter baumannii strain VB33071 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

aattgc-aacaatttattttatgagaatgtata	CRISPR spacer
-cttgcgaacactttattttatgagagtgtggg	Protospacer
  **** **** **************.***. .

166. spacer 1.27|238545|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016590 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-02, complete sequence) position: , mismatch: 7, identity: 0.781

---aattgcaacaatttattttatgagaatgtata	CRISPR spacer
acaaatt---actatttattttatgataatgtacc	Protospacer
   ****   ** ************* ******.

167. spacer 1.3|237102|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to U88974 (Streptococcus thermophilus temperate bacteriophage O1205, complete genome) position: , mismatch: 8, identity: 0.75

gcttgagatttcattttctcctttttctcaaa	CRISPR spacer
attttcattttcattttctccttttttttaaa	Protospacer
..**  . ******************.*.***

168. spacer 1.3|237102|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_004303 (Streptococcus phage O1205, complete genome) position: , mismatch: 8, identity: 0.75

gcttgagatttcattttctcctttttctcaaa	CRISPR spacer
attttcattttcattttctccttttttttaaa	Protospacer
..**  . ******************.*.***

169. spacer 1.3|237102|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014308 (Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcttgagatttcattttctcctttttctcaaa------	CRISPR spacer
gcttgagatttcattttttcatt------aaaggagca	Protospacer
*****************.** **      ***

170. spacer 1.3|237102|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014309 (Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gcttgagatttcattttctcctttttctcaaa------	CRISPR spacer
gcttgagatttcattttttcatt------aaaggagca	Protospacer
*****************.** **      ***

171. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_016748 (Marinitoga piezophila KA3 plasmid pMARPI01, complete sequence) position: , mismatch: 8, identity: 0.75

ctaactgttttagatttttgatttcattgata	CRISPR spacer
gttcttgttttagttttttgatttcatggaat	Protospacer
 *  .******** ************* **

172. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_011775 (Bacillus cereus G9842 plasmid pG9842_209, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
agatataaatttcttcaattttttgttggatg	Protospacer
 ***** ********* ********** . .

173. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tactattaaattcttctattttttcttttata	Protospacer
*. ****** ************** ***  .

174. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT604075 (Lactobacillus salivarius isolate LPM01 plasmid II) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tactattaaattcttctattttttcttttata	Protospacer
*. ****** ************** ***  .

175. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018750 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tttcttttatttgttctattttttgtttaatt	Protospacer
*  . ** **** **************** .*

176. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tttgattaatttcttttactttttgttttgca	Protospacer
*   ***********.**.*********  *

177. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028867 (Borreliella garinii strain 20047 plasmid cp26, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tttcttttatttgttctattttttgtttaatt	Protospacer
*  . ** **** **************** .*

178. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_017725 (Borreliella garinii BgVir plasmid cp26, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tttcttttatttgttctattttttgtttaatt	Protospacer
*  . ** **** **************** .*

179. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_017233 (Borreliella afzelii PKo plasmid lp28-3, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
attttctaattttttctattttttctttattt	Protospacer
   * .******.*********** *****.*

180. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to AP014444 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S32-C76, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttgttataattttttctatttcttgtttatta	Protospacer
* .*  ******.********.********.

181. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to AP013490 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C30B-MedDCM-OCT-S46-C80) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttgttataattttttctatttcttgtttatta	Protospacer
* .*  ******.********.********.

182. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to AP013767 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S31-C145, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttgttataattttttctatttcttgtttatta	Protospacer
* .*  ******.********.********.

183. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to AP013770 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S41-C83, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttgttataattttttctatttcttgtttatta	Protospacer
* .*  ******.********.********.

184. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to AP013769 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S39-C146, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttgttataattttttctatttcttgtttatta	Protospacer
* .*  ******.********.********.

185. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MT774382 (CrAssphage cr10_1, complete genome) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
gttttttaatttcttcaattttttctttagcg	Protospacer
   * *********** ******* **** *

186. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN694427 (Marine virus AFVG_250M959, complete genome) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ctatattaagtgcttctattttttgtgtgtgg	Protospacer
. ******* * ************** *.*

187. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN694358 (Marine virus AFVG_250M310, complete genome) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ctatattaagtgcttctattttttgtgtgtga	Protospacer
. ******* * ************** *.*

188. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK448993 (Streptococcus phage Javan616, complete genome) position: , mismatch: 8, identity: 0.75

tgata-ttaatttcttctattttttgtttatct	CRISPR spacer
-gttgcttagtttcttctattttttctttaagc	Protospacer
 * *. ***.*************** ****  .

189. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN693923 (Marine virus AFVG_250M958, complete genome) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ctatattaagtgcttctattttttgtgtgtgg	Protospacer
. ******* * ************** *.*

190. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to AP013766 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C30B-MedDCM-OCT-S30-C97, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttgttataattttttctatttcttgtttatta	Protospacer
* .*  ******.********.********.

191. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012498 (Escherichia coli strain 06-00048 plasmid pCFSAN004178P_02, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tgtggttattttcttctgttttttgtttgtgg	Protospacer
**  .*** ********.**********.*

192. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012500 (Escherichia coli strain 09-00049 plasmid pCFSAN004180G, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tgtggttattttcttctgttttttgtttgtgg	Protospacer
**  .*** ********.**********.*

193. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012501 (Escherichia coli strain 08-00022 plasmid pCFSAN004179G, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tgtggttattttcttctgttttttgtttgtgg	Protospacer
**  .*** ********.**********.*

194. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tttctttagtttcttctattttttcttttttt	Protospacer
*  . ***.*************** *** *.*

195. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042296 (Escherichia coli strain RM9088 plasmid p1RM9088, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tgtggttattttcttctgttttttgtttgtgg	Protospacer
**  .*** ********.**********.*

196. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012499 (Escherichia coli strain GB089 plasmid pCFSAN004181P, complete sequence) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tgtggttattttcttctgttttttgtttgtgg	Protospacer
**  .*** ********.**********.*

197. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
atatttatattttttatattttttgtttatca	Protospacer
  ** *  ****.** ***************

198. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MH107028 (Campylobacter phage CP39, partial genome) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
atatttatattttttatattttttgtttatca	Protospacer
  ** *  ****.** ***************

199. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_015464 (Campylobacter phage NCTC12673, complete genome) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
atatttatattttttatattttttgtttatca	Protospacer
  ** *  ****.** ***************

200. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to KX236333 (Campylobacter phage PC14, complete genome) position: , mismatch: 8, identity: 0.75

tgatattaatttcttctattttttgtttatct	CRISPR spacer
atatttatattttttatattttttgtttatca	Protospacer
  ** *  ****.** ***************

201. spacer 1.23|238305|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019532 (Serratia symbiotica strain IS plasmid pSsyis1, complete sequence) position: , mismatch: 8, identity: 0.75

aataacattcaacgggctttagttttaccaca	CRISPR spacer
agcgacgcacaacgggcattagtcttaccaca	Protospacer
*...**.. ******** *****.********

202. spacer 1.25|238425|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_004846 (Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence) position: , mismatch: 8, identity: 0.75

gttatagttaagtcgtcatctcgtccttaact	CRISPR spacer
tggttggttaagtcgtcttttcgtccttaatt	Protospacer
    *.*********** *.**********.*

203. spacer 1.25|238425|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_004846 (Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence) position: , mismatch: 8, identity: 0.75

gttatagttaagtcgtcatctcgtccttaact	CRISPR spacer
tggttggttaagtcgtcttttcgtccttaatt	Protospacer
    *.*********** *.**********.*

204. spacer 1.25|238425|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_004058 (Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence) position: , mismatch: 8, identity: 0.75

gttatagttaagtcgtcatctcgtccttaact	CRISPR spacer
tggttggttaagtcgtcttttcgtccttaatt	Protospacer
    *.*********** *.**********.*

205. spacer 1.25|238425|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_004058 (Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence) position: , mismatch: 8, identity: 0.75

gttatagttaagtcgtcatctcgtccttaact	CRISPR spacer
tggttggttaagtcgtcttttcgtccttaatt	Protospacer
    *.*********** *.**********.*

206. spacer 1.26|238485|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to CP009912 (Borreliella chilensis strain VA1 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.75

acgaagtttttaaccatttgctttttttaact	CRISPR spacer
tagtggtttttaaccactagctttttttcaat	Protospacer
  * .***********.* ********* * *

207. spacer 1.26|238485|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032535 (Bacillus megaterium NCT-2 plasmid pNCT2_7, complete sequence) position: , mismatch: 8, identity: 0.75

acgaagtttttaaccatttgctttttttaact	CRISPR spacer
acttcgcctttaaacttttgctttttttaacg	Protospacer
**   *..***** * ***************

208. spacer 1.26|238485|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MH572298 (Microviridae sp. isolate SD_SC_87, complete genome) position: , mismatch: 8, identity: 0.75

-acgaagtttttaaccatttgctttttttaact	CRISPR spacer
tgtggcgttttt-accatttactttttttaata	Protospacer
 ..*. ****** *******.**********.

209. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017081 (Bacillus muralis strain G25-68 plasmid pG25-68, complete sequence) position: , mismatch: 8, identity: 0.75

gaaatcggggaaattttaaaacgtattttaga---	CRISPR spacer
aaaatgggggaaattttaaaaggtg---tggagtt	Protospacer
.**** *************** **.   *.**

210. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_014249 ('Nostoc azollae' 0708 plasmid pAzo01, complete sequence) position: , mismatch: 8, identity: 0.75

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
acaaaaggtgaaattttaaaaagtatttttgc	Protospacer
. **  ** ************ ******* *

211. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_018486 (Bacillus thuringiensis HD-771 plasmid p01, complete sequence) position: , mismatch: 8, identity: 0.75

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
aagagaagtgaaattttaaaaccttttttaga	Protospacer
.*.*  .* ************* * *******

212. spacer 1.33|238906|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN856077 (Bacteriophage sp. isolate 40, complete genome) position: , mismatch: 8, identity: 0.75

aaatacaaaaaatgggagcattggcaaaatta	CRISPR spacer
ggataggcgaaacgagagcattggcaaaatta	Protospacer
..*** . .***.*.*****************

213. spacer 1.3|237102|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012031 (Leptospira borgpetersenii serovar Ballum strain 56604 plasmid lbp1, complete sequence) position: , mismatch: 9, identity: 0.719

gcttgagatttcattttctcctttttctcaaa	CRISPR spacer
aaaagagatttaattttttcctttttcttatc	Protospacer
.   ******* *****.**********.*

214. spacer 1.3|237102|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK448980 (Streptococcus phage Javan536, complete genome) position: , mismatch: 9, identity: 0.719

gcttgagatttcattttctcctttttctcaaa	CRISPR spacer
attttcattttcattttctcctttttttaaat	Protospacer
..**  . ******************.* **

215. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_019774 (Anabaena cylindrica PCC 7122 plasmid pANACY.04, complete sequence) position: , mismatch: 9, identity: 0.719

ctaactgttttagatttttgatttcattgata	CRISPR spacer
taataagttttagatttttgtttccattgcca	Protospacer
. *   ************** **.***** .*

216. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ctaactgttttagatttttgatttcattgata	CRISPR spacer
aatccttttttagatttttaatttcatctatt	Protospacer
    ** ************.*******. **

217. spacer 1.12|237642|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048880 (Oceanospirillales bacterium S2-4-1H plasmid pB, complete sequence) position: , mismatch: 9, identity: 0.719

actaatttcggcatttgaccaagccacgcata-----	CRISPR spacer
tctaatttccgcatttgatcaa-----gcgtaagcgg	Protospacer
 ******** ********.***     **.**

218. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024377 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp23, complete sequence) position: , mismatch: 9, identity: 0.719

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tctccttaatttcttcttttttttctttaaga	Protospacer
*  . ************ ****** ****

219. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN692979 (Marine virus AFVG_117M14, complete genome) position: , mismatch: 9, identity: 0.719

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ggatattcatttcttctattttctgaaacttg	Protospacer
 ****** **************.**    *.

220. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN693448 (Marine virus AFVG_25M325, complete genome) position: , mismatch: 9, identity: 0.719

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ggatattcatttcttctattttctgaaacttg	Protospacer
 ****** **************.**    *.

221. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035135 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed4) position: , mismatch: 9, identity: 0.719

tgatattaatttcttctattttttgtttatct	CRISPR spacer
caatattagtttcttatattttttgcgcgttt	Protospacer
..******.****** *********. ..*.*

222. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG205643 (Paeniclostridium sordellii strain S0804018 plasmid pCS1-5, complete sequence) position: , mismatch: 9, identity: 0.719

tgatattaatttcttctattttttgtttatct	CRISPR spacer
ttgagtctctttcttctattatttttttatct	Protospacer
* . .*.  *********** *** *******

223. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to KY744230 (Sulfolobus islandicus rod-shaped virus 10, partial genome) position: , mismatch: 9, identity: 0.719

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tatcttctatttcttcaattttttgtttttca	Protospacer
*. . *. ******** *********** **

224. spacer 1.24|238365|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 9, identity: 0.719

gattgccattgcaacacgggcaatttggcata	CRISPR spacer
accattcattgcagcacgggcaatttggcttt	Protospacer
. .  .*******.*************** *

225. spacer 1.24|238365|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 9, identity: 0.719

gattgccattgcaacacgggcaatttggcata	CRISPR spacer
accattcattgcagcacgggcaatttggcttt	Protospacer
. .  .*******.*************** *

226. spacer 1.24|238365|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 9, identity: 0.719

gattgccattgcaacacgggcaatttggcata	CRISPR spacer
accattcattgcagcacgggcaatttggcttt	Protospacer
. .  .*******.*************** *

227. spacer 1.24|238365|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049202 (Escherichia coli strain PapRG-04-4 plasmid pIncFIB, complete sequence) position: , mismatch: 9, identity: 0.719

gattgccattgcaacacgggcaatttggcata	CRISPR spacer
attcgccattgcaacacaggcaatatgccgat	Protospacer
. *.*************.****** ** *.

228. spacer 1.26|238485|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MG869626 (Polaromonas sp. W5N plasmid pW5NP1, complete sequence) position: , mismatch: 9, identity: 0.719

acgaagtttttaaccatttgctttttttaact	CRISPR spacer
attggctttctaaccatttgctttttctaaag	Protospacer
*. .. ***.****************.***

229. spacer 1.26|238485|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134432 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 23) position: , mismatch: 9, identity: 0.719

acgaagtttttaaccatttgctttttttaact	CRISPR spacer
ctgaggtttttaaccatttgcctttagtcaaa	Protospacer
 .**.****************.***  * *

230. spacer 1.27|238545|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020945 (Pantoea ananatis strain PNA 97-1R plasmid unamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aattgcaacaatttattttatgagaatgtata	CRISPR spacer
cgactcataaattttttttatgataatgtata	Protospacer
 . . **  ***** ******** ********

231. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 9, identity: 0.719

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
gagcggttagatatttttaaacgtattttaga	Protospacer
**.     .** ***** **************

232. spacer 1.33|238906|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MT774380 (CrAssphage cr1_1, complete genome) position: , mismatch: 9, identity: 0.719

aaatacaaaaaatgggagcattggcaaaatta	CRISPR spacer
ctatttcccaaatggcagcattggcataatta	Protospacer
  ** .   ****** ********** *****

233. spacer 1.2|237042|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019039 (Bacillus velezensis strain GH1-13 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ttttcccccaccaaccgagtgttttcaacatt	CRISPR spacer
aataaaataaccaacccagttttttcaacatt	Protospacer
  *    . ******* *** ***********

234. spacer 1.3|237102|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MG516909 (Escherichia coli plasmid pEc1675, complete sequence) position: , mismatch: 10, identity: 0.688

gcttgagatttcattttctcctttttctcaaa	CRISPR spacer
tgtggagatttcattttctgcttgttcgacgt	Protospacer
  * *************** *** ***   .

235. spacer 1.4|237162|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031066 (Bacillus sp. SH8-8 plasmid pl193, complete sequence) position: , mismatch: 10, identity: 0.688

attgtcagaaagaggacttttttccatttaaa	CRISPR spacer
attggcagaaagaggtctttttttatcctcgg	Protospacer
**** ********** *******.  ..* ..

236. spacer 1.4|237162|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031063 (Bacillus sp. AR4-2 plasmid pl192, complete sequence) position: , mismatch: 10, identity: 0.688

attgtcagaaagaggacttttttccatttaaa	CRISPR spacer
attggcagaaagaggtctttttttatcctcgg	Protospacer
**** ********** *******.  ..* ..

237. spacer 1.7|237342|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 10, identity: 0.688

acgataatgaaatcaggcaaacataaaaaaat	CRISPR spacer
gaagaaatgaaatcaggacaacataaaactac	Protospacer
. .. ************  *********  *.

238. spacer 1.7|237342|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 10, identity: 0.688

acgataatgaaatcaggcaaacataaaaaaat	CRISPR spacer
gaagaaatgaaatcaggacaacataaaactac	Protospacer
. .. ************  *********  *.

239. spacer 1.7|237342|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 10, identity: 0.688

acgataatgaaatcaggcaaacataaaaaaat	CRISPR spacer
gaagaaatgaaatcaggacaacataaaactac	Protospacer
. .. ************  *********  *.

240. spacer 1.7|237342|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 10, identity: 0.688

acgataatgaaatcaggcaaacataaaaaaat	CRISPR spacer
gaagaaatgaaatcaggacaacataaaactac	Protospacer
. .. ************  *********  *.

241. spacer 1.7|237342|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 10, identity: 0.688

acgataatgaaatcaggcaaacataaaaaaat	CRISPR spacer
gaagaaatgaaatcaggacaacataaaactac	Protospacer
. .. ************  *********  *.

242. spacer 1.7|237342|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 10, identity: 0.688

acgataatgaaatcaggcaaacataaaaaaat	CRISPR spacer
gaagaaatgaaatcaggacaacataaaactac	Protospacer
. .. ************  *********  *.

243. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043635 (Empedobacter brevis strain SE1-3 plasmid pSE1-3-9kb, complete sequence) position: , mismatch: 10, identity: 0.688

ctaactgttttagatttttgatttcattgata	CRISPR spacer
ggtatgcttttagatttttaatttcatagact	Protospacer
   *.  ************.******* **.

244. spacer 1.8|237402|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041287 (Acinetobacter indicus strain 94-2 plasmid p94-2-p4, complete sequence) position: , mismatch: 10, identity: 0.688

ctaactgttttagatttttgatttcattgata	CRISPR spacer
agcgacgttttagattttgtatttcattgttg	Protospacer
   . .************  ********* *.

245. spacer 1.11|237582|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN693765 (Marine virus AFVG_250M576, complete genome) position: , mismatch: 10, identity: 0.688

cccggacagcttggaatttttcaatatcgcaa	CRISPR spacer
ctaatgcagcttggactttttctatatcgttc	Protospacer
*. . .********* ****** ******.

246. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 10, identity: 0.688

tgatattaatttcttctattttttgtttatct-------	CRISPR spacer
cgatattaatttcatctattattt-------tgaagaaa	Protospacer
.************ ****** ***       *

247. spacer 1.18|238004|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019368 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpT39, complete sequence) position: , mismatch: 10, identity: 0.688

tgatattaatttcttctattttttgtttatct	CRISPR spacer
tgttatcaatttcttctatttttgtaaaaaga	Protospacer
** ***.****************     *

248. spacer 1.24|238365|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_015579 (Novosphingobium sp. PP1Y plasmid Lpl, complete sequence) position: , mismatch: 10, identity: 0.688

gattgccattgcaacacgggcaatttggcata	CRISPR spacer
ttgcgcctttgcagcacgggcaatttgcccgg	Protospacer
   .*** *****.************* *  .

249. spacer 1.26|238485|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MN693029 (Marine virus AFVG_117M56, complete genome) position: , mismatch: 10, identity: 0.688

acgaagtttttaaccatttgctttttttaact	CRISPR spacer
taaagattttaaatcatttgctttttttatta	Protospacer
  .*..**** **.*************** .

250. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
cggacgatggaaattttaaaaggtatttcagc	Protospacer
 ..*. . ************* ******.**

251. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
cggacgatggaaattttaaaaggtatttcagc	Protospacer
 ..*. . ************* ******.**

252. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
cggacgatggaaattttaaaaggtatttcagc	Protospacer
 ..*. . ************* ******.**

253. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
cggacgatggaaattttaaaaggtatttcagc	Protospacer
 ..*. . ************* ******.**

254. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
agcaaaaaagaaattttaaaacttgttttaga	Protospacer
.. *  ...************* *.*******

255. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
agcaaaaaagaaattttaaaacttgttttaga	Protospacer
.. *  ...************* *.*******

256. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MG592671 (Vibrio phage 2.275.O._10N.286.54.E11, partial genome) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
ggtcgttttgaaattatacaacgtattttaga	Protospacer
*.   .   ****** ** *************

257. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to MK408758 (Campylobacter phage CP20, complete genome) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
agcaaaaaagaaattttaaaacttgttttaga	Protospacer
.. *  ...************* *.*******

258. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
agcaaaaaagaaattttaaaacttgttttaga	Protospacer
.. *  ...************* *.*******

259. spacer 1.28|238605|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to FN667789 (Campylobacter phage CPt10, complete genome) position: , mismatch: 10, identity: 0.688

gaaatcggggaaattttaaaacgtattttaga	CRISPR spacer
agcaaaaaagaaattttaaaacttgttttaga	Protospacer
.. *  ...************* *.*******

260. spacer 1.33|238906|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017407 (Lactobacillus plantarum strain RI-113 plasmid pRI113_1, complete sequence) position: , mismatch: 10, identity: 0.688

aaatacaaaaaatgggagcattggcaaaatta	CRISPR spacer
aaataaaaaaaatgtgagcattgcgctggtag	Protospacer
***** ******** ********    ..* .

261. spacer 1.33|238906|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028279 (Lactobacillus plantarum strain SRCM100995 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

aaatacaaaaaatgggagcattggcaaaatta	CRISPR spacer
aaataaaaaaaatgtgagcattgcgctggtag	Protospacer
***** ******** ********    ..* .

262. spacer 1.20|238124|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to CP031730 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

attagagttggcgatattgtgatacgcaataa	CRISPR spacer
ggcgaggttggcgatattgcgatacacaaatc	Protospacer
. ....*************.*****.***

263. spacer 1.26|238485|32|NC_010278|CRISPRCasFinder,CRT,PILER-CR matches to NC_009726 (Coxiella burnetii Dugway 5J108-111 plasmid pQpDG, complete sequence) position: , mismatch: 11, identity: 0.656

acgaagtttttaaccatttgctttttttaact	CRISPR spacer
ttagcgtttttaacaatttcctttttttgctc	Protospacer
 ... ********* **** ********. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

440465 : 448201

Staphylococcus_phage(50.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012262803.1\|440465_441560_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.8e-48	33.9
WP_005596391.1\|441684_442332_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.1e-45	43.7
WP_005596392.1\|442392_443598_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.5e-96	46.7
WP_005611553.1\|443708_444170_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.3e-42	58.8
WP_005599960.1\|444439_445228_+\|transposase	transposase	NA	NA	NA	NA
WP_005611555.1\|445356_445845_-	transcription elongation factor GreB	NA	NA	NA	NA
WP_005596397.1\|445854_446790_-	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	2.7e-37	34.2
WP_042655142.1\|446917_448201_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	1.1e-30	32.9

DBSCAN-SWA_2

1250942 : 1260053

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005608326.1\|1250942_1251575_+	repressor LexA	A0A2H4JG58	uncultured_Caudovirales_phage	1.2e-09	48.5
WP_005610420.1\|1251634_1252315_+	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA
WP_012263103.1\|1252400_1253132_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	4.8e-42	46.9
WP_012263104.1\|1253246_1254284_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	6.8e-18	42.9
WP_012263105.1\|1254364_1255540_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2P1ELP3	Moumouvirus	3.0e-14	32.1
WP_005604850.1\|1255746_1257057_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	8.9e-132	59.4
WP_005597993.1\|1257132_1257762_+	NUDIX hydrolase	NA	NA	NA	NA
WP_005597994.1\|1257775_1258186_+	DUF2251 domain-containing protein	NA	NA	NA	NA
WP_012263107.1\|1258244_1260053_-	ATP-dependent DNA helicase RecQ	A0A1V0SBK0	Catovirus	2.1e-86	37.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage