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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_009483 Geobacter uraniireducens Rf4, complete genome 6 crisprs RT,csa3,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,WYL,PD-DExK,DinG,cas4,cas3HD,Cas9_archaeal,PrimPol,cas6 3 31 4 1

Results visualization

1. NC_009483
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_009483_1 902948-903527 Orphan NA
10 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_009483_2 995047-996844 TypeI-E I-E
29 spacers
cas2,cas1,cas5,cas7,cas6e,cse2gr11

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_009483_3 2279989-2280068 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_009483_4 2778013-2778155 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_009483_5 3158747-3158985 Unclear I-C,III-B:NA
3 spacers
cas2,cas4,cas3HD

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_009483_6 4052331-4052408 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_009483_4 4.2|2778091|42|NC_009483|CRISPRCasFinder 2778091-2778132 42 NC_009483.1 3331385-3331426 0 1.0
NC_009483_5 5.4|3158843|34|NC_009483|PILER-CR 3158843-3158876 34 NC_009483.1 93251-93284 0 1.0
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 NC_009483.1 3331330-3331361 1 0.969

1. spacer 4.2|2778091|42|NC_009483|CRISPRCasFinder matches to position: 3331385-3331426, mismatch: 0, identity: 1.0

ttacaggcatataatactagatgctggcatatagtattataa	CRISPR spacer
ttacaggcatataatactagatgctggcatatagtattataa	Protospacer
******************************************

2. spacer 5.4|3158843|34|NC_009483|PILER-CR matches to position: 93251-93284, mismatch: 0, identity: 1.0

cgtccagtttacgttcgtagtcatggtagccgag	CRISPR spacer
cgtccagtttacgttcgtagtcatggtagccgag	Protospacer
**********************************

3. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to position: 3331330-3331361, mismatch: 1, identity: 0.969

aattggataatagaataaatgaaaaaacaggc	CRISPR spacer
aattggataatggaataaatgaaaaaacaggc	Protospacer
***********.********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_009483_1 1.1|902967|26|NC_009483|CRT 902967-902992 26 NZ_CP017574 Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence 269956-269981 4 0.846
NC_009483_1 1.1|902967|26|NC_009483|CRT 902967-902992 26 CP013001 Bacillus thuringiensis strain XL6 plasmid, complete sequence 214651-214676 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP017721 Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence 37839-37864 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP017721 Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence 40935-40960 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP017721 Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence 41067-41092 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP017721 Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence 41331-41356 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP017721 Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence 41463-41488 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP054616 Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence 308527-308552 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NC_019849 Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence 1361296-1361321 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NC_017326 Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence 1322062-1322087 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NC_017323 Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence 912923-912948 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NC_018701 Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence 1341515-1341540 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021820 Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence 18450-18475 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021831 Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence 1532389-1532414 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021814 Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence 1249678-1249703 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021810 Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence 465412-465437 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021218 Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence 1515272-1515297 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP026527 Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence 1349961-1349986 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NC_003078 Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence 385229-385254 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP019586 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence 386945-386970 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021799 Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence 452767-452792 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021828 Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence 12778-12803 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021823 Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence 68165-68190 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021795 Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence 1286319-1286344 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021806 Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence 1339072-1339097 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP019484 Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence 594953-594978 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP019487 Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence 382494-382519 4 0.846
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NC_020560 Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence 385230-385255 4 0.846
NC_009483_2 2.19|996173|33|NC_009483|PILER-CR 996173-996205 33 NZ_CP050089 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence 205139-205171 4 0.879
NC_009483_2 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT 996174-996205 32 NZ_CP050089 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence 205140-205171 4 0.875
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP009146 Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence 1287036-1287061 5 0.808
NC_009483_1 1.10|903483|26|NC_009483|CRT 903483-903508 26 NZ_CP021802 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence 1955051-1955076 5 0.808
NC_009483_1 1.1|902967|26|NC_009483|CRT 902967-902992 26 NZ_CP022417 Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-2, complete sequence 188831-188856 6 0.769
NC_009483_1 1.8|903393|26|NC_009483|CRT 903393-903418 26 NZ_CP054032 Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence 478513-478538 6 0.769
NC_009483_2 2.22|996356|33|NC_009483|PILER-CR 996356-996388 33 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 296713-296745 6 0.818
NC_009483_2 2.22|996356|33|NC_009483|PILER-CR 996356-996388 33 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 293887-293919 6 0.818
NC_009483_2 2.35|995381|32|NC_009483|CRISPRCasFinder,CRT 995381-995412 32 NZ_CP038146 Streptomyces sp. S501 plasmid unnamed, complete sequence 244361-244392 6 0.812
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 296714-296745 6 0.812
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 293888-293919 6 0.812
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 NZ_CP014857 Lysinibacillus sphaericus III(3)7 plasmid, complete sequence 153993-154024 6 0.812
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 NC_010381 Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequence 20610-20641 6 0.812
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 NZ_CP014644 Lysinibacillus sphaericus strain OT4b.25 plasmid unnamed, complete sequence 102971-103002 6 0.812
NC_009483_2 2.6|995380|33|NC_009483|PILER-CR 995380-995412 33 NZ_CP038146 Streptomyces sp. S501 plasmid unnamed, complete sequence 244361-244393 7 0.788
NC_009483_2 2.8|995502|33|NC_009483|PILER-CR 995502-995534 33 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 62888-62920 7 0.788
NC_009483_2 2.29|996783|33|NC_009483|PILER-CR 996783-996815 33 AP021850 Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome 350363-350395 7 0.788
NC_009483_2 2.37|995503|32|NC_009483|CRISPRCasFinder,CRT 995503-995534 32 AP018320 Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome 62888-62919 7 0.781
NC_009483_2 2.50|996296|32|NC_009483|CRISPRCasFinder,CRT 996296-996327 32 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 395867-395898 7 0.781
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP032344 Azospirillum brasilense strain MTCC4038 plasmid p5, complete sequence 122474-122505 7 0.781
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP033323 Azospirillum brasilense strain Cd plasmid p5, complete sequence 22177-22208 7 0.781
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP033317 Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence 46048-46079 7 0.781
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP012919 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p5, complete sequence 60966-60997 7 0.781
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP018229 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence 836769-836800 7 0.781
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP016287 Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence 64202-64233 7 0.781
NC_009483_2 2.58|996784|32|NC_009483|CRISPRCasFinder,CRT 996784-996815 32 AP021850 Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome 350364-350395 7 0.781
NC_009483_2 2.22|996356|33|NC_009483|PILER-CR 996356-996388 33 NZ_CP032344 Azospirillum brasilense strain MTCC4038 plasmid p5, complete sequence 122474-122506 8 0.758
NC_009483_2 2.22|996356|33|NC_009483|PILER-CR 996356-996388 33 NZ_CP033323 Azospirillum brasilense strain Cd plasmid p5, complete sequence 22176-22208 8 0.758
NC_009483_2 2.22|996356|33|NC_009483|PILER-CR 996356-996388 33 NZ_CP033317 Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence 46048-46080 8 0.758
NC_009483_2 2.22|996356|33|NC_009483|PILER-CR 996356-996388 33 NZ_CP012919 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p5, complete sequence 60965-60997 8 0.758
NC_009483_2 2.31|995137|32|NC_009483|CRISPRCasFinder,CRT 995137-995168 32 NZ_CP032325 Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence 401524-401555 8 0.75
NC_009483_2 2.31|995137|32|NC_009483|CRISPRCasFinder,CRT 995137-995168 32 NZ_CP007796 Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence 279605-279636 8 0.75
NC_009483_2 2.32|995198|32|NC_009483|CRISPRCasFinder,CRT 995198-995229 32 NZ_CP022306 Thalassococcus sp. S3 plasmid pS3C, complete sequence 3941-3972 8 0.75
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP040803 Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence 76832-76863 8 0.75
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP020429 Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence 104778-104809 8 0.75
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP020439 Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence 129816-129847 8 0.75
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP018188 Streptococcus salivarius strain ICDC2 plasmid, complete sequence 112862-112893 8 0.75
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 MN480762 Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence 15041-15072 8 0.75
NC_009483_2 2.37|995503|32|NC_009483|CRISPRCasFinder,CRT 995503-995534 32 NZ_CP025980 Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence 75883-75914 8 0.75
NC_009483_2 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT 995625-995656 32 NZ_AF135182 Serratia entomophila strain A1MO2 plasmid pADAP, complete sequence 145443-145474 8 0.75
NC_009483_2 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT 995625-995656 32 NC_002523 Serratia entomophila plasmid pADAP, complete sequence 145005-145036 8 0.75
NC_009483_2 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT 995625-995656 32 NZ_CP015597 Mycobacterium sp. YC-RL4 plasmid pMYC1, complete sequence 155893-155924 8 0.75
NC_009483_2 2.44|995930|32|NC_009483|CRISPRCasFinder,CRT 995930-995961 32 NZ_CP049116 Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence 8670-8701 8 0.75
NC_009483_2 2.45|995991|32|NC_009483|CRISPRCasFinder,CRT 995991-996022 32 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 65286-65317 8 0.75
NC_009483_2 2.47|996113|32|NC_009483|CRISPRCasFinder,CRT 996113-996144 32 MN694260 Marine virus AFVG_250M1009, complete genome 20527-20558 8 0.75
NC_009483_2 2.47|996113|32|NC_009483|CRISPRCasFinder,CRT 996113-996144 32 MN694525 Marine virus AFVG_250M794, complete genome 20408-20439 8 0.75
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP022365 Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence 172836-172867 8 0.75
NC_009483_2 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT 996357-996388 32 NZ_CP029359 Azospirillum sp. CFH 70021 plasmid unnamed4 20726-20757 8 0.75
NC_009483_2 2.52|996418|32|NC_009483|CRISPRCasFinder,CRT 996418-996449 32 NZ_CP012399 Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence 785213-785244 8 0.75
NC_009483_2 2.53|996479|32|NC_009483|CRISPRCasFinder,CRT 996479-996510 32 MN693941 Marine virus AFVG_250M763, complete genome 25890-25921 8 0.75
NC_009483_2 2.53|996479|32|NC_009483|CRISPRCasFinder,CRT 996479-996510 32 MN694248 Marine virus AFVG_250M764, complete genome 15259-15290 8 0.75
NC_009483_2 2.58|996784|32|NC_009483|CRISPRCasFinder,CRT 996784-996815 32 NZ_CP038235 Leisingera sp. NJS201 plasmid unnamed1, complete sequence 40930-40961 8 0.75
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 MN694049 Marine virus AFVG_250M506, complete genome 29689-29720 8 0.75
NC_009483_2 2.15|995929|33|NC_009483|PILER-CR 995929-995961 33 NZ_CP049116 Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence 8669-8701 9 0.727
NC_009483_2 2.16|995990|33|NC_009483|PILER-CR 995990-996022 33 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 65286-65318 9 0.727
NC_009483_2 2.23|996417|33|NC_009483|PILER-CR 996417-996449 33 NZ_CP012399 Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence 785213-785245 9 0.727
NC_009483_2 2.24|996478|33|NC_009483|PILER-CR 996478-996510 33 MN694248 Marine virus AFVG_250M764, complete genome 15259-15291 9 0.727
NC_009483_2 2.24|996478|33|NC_009483|PILER-CR 996478-996510 33 MN693941 Marine virus AFVG_250M763, complete genome 25889-25921 9 0.727
NC_009483_2 2.29|996783|33|NC_009483|PILER-CR 996783-996815 33 NZ_CP029777 Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence 98942-98974 9 0.727
NC_009483_2 2.34|995320|32|NC_009483|CRISPRCasFinder,CRT 995320-995351 32 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 712076-712107 9 0.719
NC_009483_2 2.37|995503|32|NC_009483|CRISPRCasFinder,CRT 995503-995534 32 CP036360 Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence 164082-164113 9 0.719
NC_009483_2 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT 995625-995656 32 NC_014155 Thiomonas intermedia K12 plasmid pTINT02, complete sequence 3764-3795 9 0.719
NC_009483_2 2.53|996479|32|NC_009483|CRISPRCasFinder,CRT 996479-996510 32 MG962374 Mycobacterium phage Paola, complete genome 58868-58899 9 0.719
NC_009483_2 2.53|996479|32|NC_009483|CRISPRCasFinder,CRT 996479-996510 32 MF185720 Mycobacterium phage Guillsminger, complete genome 58868-58899 9 0.719
NC_009483_2 2.55|996601|32|NC_009483|CRISPRCasFinder,CRT 996601-996632 32 NZ_CP041156 Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence 166083-166114 9 0.719
NC_009483_2 2.58|996784|32|NC_009483|CRISPRCasFinder,CRT 996784-996815 32 NZ_CP029777 Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence 98943-98974 9 0.719
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 MT075580 Lysinibacillus sphaericus strain SSII-1 plasmid pSSII-1, complete sequence 70049-70080 9 0.719
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 NZ_LR215038 Mycoplasma maculosum strain NCTC10168 plasmid 2 2484-2515 9 0.719
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 123519-123550 9 0.719
NC_009483_4 4.1|2778036|32|NC_009483|CRISPRCasFinder 2778036-2778067 32 KU517658 Clostridium phage HM T, complete genome 6762-6793 9 0.719
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP047429 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence 121120-121151 10 0.688
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 20196-20227 10 0.688
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP046373 Spiroplasma citri strain LB 319 plasmid pScpLB319-2, complete sequence 1876-1907 10 0.688
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP047438 Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-1, complete sequence 35780-35811 10 0.688
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP047444 Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-7 37145-37176 10 0.688
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 AP014075 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C25-MedDCM-OCT-S27-C255, *** SEQUENCING IN PROGRESS *** 3250-3281 10 0.688
NC_009483_2 2.50|996296|32|NC_009483|CRISPRCasFinder,CRT 996296-996327 32 NZ_CP035092 Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence 42013-42044 10 0.688
NC_009483_2 2.50|996296|32|NC_009483|CRISPRCasFinder,CRT 996296-996327 32 NC_008688 Paracoccus denitrificans PD1222 plasmid 1, complete sequence 289360-289391 10 0.688
NC_009483_2 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT 996540-996571 32 NZ_CP031445 Acinetobacter baumannii strain MDR-UNC plasmid unnamed1, complete sequence 30618-30649 10 0.688
NC_009483_2 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT 996540-996571 32 NZ_CP040426 Acinetobacter baumannii strain PB364 plasmid pPB364_1, complete sequence 91425-91456 10 0.688
NC_009483_2 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT 996540-996571 32 NZ_CP029570 Acinetobacter baumannii strain DA33098 plasmid pDA33098-108, complete sequence 91699-91730 10 0.688
NC_009483_2 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT 996540-996571 32 NZ_CP027122 Acinetobacter baumannii strain AR_0056 plasmid unnamed1, complete sequence 81701-81732 10 0.688
NC_009483_2 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT 996540-996571 32 NZ_CP027608 Acinetobacter baumannii strain AR_0102 plasmid unnamed1, complete sequence 75106-75137 10 0.688
NC_009483_2 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT 996540-996571 32 NZ_CP026705 Acinetobacter baumannii strain AR_0056 plasmid tig00000058_pilon, complete sequence 61900-61931 10 0.688
NC_009483_2 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT 996540-996571 32 NZ_CP035046 Acinetobacter baumannii strain ABUH793 plasmid p107.0Kbp, complete sequence 76058-76089 10 0.688
NC_009483_2 2.55|996601|32|NC_009483|CRISPRCasFinder,CRT 996601-996632 32 NZ_CP021031 Rhizobium sp. NXC14 plasmid pRspNXC14a, complete sequence 372005-372036 10 0.688
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP054567 Bacillus thuringiensis strain FDAARGOS_791 plasmid unnamed, complete sequence 55212-55243 11 0.656
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 113012-113043 11 0.656
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NC_016794 Bacillus cereus F837/76 plasmid pF837_55, complete sequence 49898-49929 11 0.656
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NC_008598 Bacillus thuringiensis str. Al Hakam plasmid pALH1, complete sequence 53261-53292 11 0.656
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP009599 Bacillus thuringiensis strain HD571 plasmid pBFQ, complete sequence 54190-54221 11 0.656
NC_009483_2 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT 995442-995473 32 NZ_CP053982 Bacillus thuringiensis strain FDAARGOS_793 plasmid unnamed1, complete sequence 21300-21331 11 0.656
NC_009483_2 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT 995625-995656 32 NZ_CP014677 Kozakia baliensis strain DSM 14400 plasmid pKB14400_3, complete sequence 47195-47226 11 0.656
NC_009483_2 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT 996174-996205 32 AGRM01000007 Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A2, complete sequence, whole genome shotgun sequence 62547-62578 11 0.656
NC_009483_2 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT 996174-996205 32 NZ_CP030218 Salmonella enterica strain SA20075157 plasmid pSA20075157.1, complete sequence 73923-73954 11 0.656
NC_009483_2 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT 996174-996205 32 NZ_CP025255 Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence 93578-93609 11 0.656
NC_009483_2 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT 996174-996205 32 CP053415 Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence 38790-38821 11 0.656
NC_009483_2 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT 996174-996205 32 CP053327 Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence 47113-47144 11 0.656
NC_009483_2 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT 996174-996205 32 NZ_CP030289 Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence 113503-113534 11 0.656
NC_009483_2 2.52|996418|32|NC_009483|CRISPRCasFinder,CRT 996418-996449 32 NZ_LR134470 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence 4641-4672 11 0.656
NC_009483_2 2.52|996418|32|NC_009483|CRISPRCasFinder,CRT 996418-996449 32 NZ_CP034156 Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence 474871-474902 11 0.656

1. spacer 1.1|902967|26|NC_009483|CRT matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 4, identity: 0.846

ttttgatttttcggggctgaacctga	CRISPR spacer
ttttgttttttcggggctgaatgtaa	Protospacer
***** ***************. *.*

2. spacer 1.1|902967|26|NC_009483|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 4, identity: 0.846

ttttgatttttcggggctgaacctga	CRISPR spacer
ttttgttttttcggggctgaatgtaa	Protospacer
***** ***************. *.*

3. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP017721 (Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ggcagacctgaccaacgccaccctga	Protospacer
 .*..*********************

4. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP017721 (Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ggctgacctgaccaacgccaccctga	Protospacer
 .* .*********************

5. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP017721 (Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ggctgacctgaccaacgccaccctga	Protospacer
 .* .*********************

6. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP017721 (Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ggctgacctgaccaacgccaccctga	Protospacer
 .* .*********************

7. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP017721 (Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ggctgacctgaccaacgccaccctga	Protospacer
 .* .*********************

8. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
tgcgaacctgacgaccgccaccctga	Protospacer
..********** * ***********

9. spacer 1.10|903483|26|NC_009483|CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

10. spacer 1.10|903483|26|NC_009483|CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

11. spacer 1.10|903483|26|NC_009483|CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

12. spacer 1.10|903483|26|NC_009483|CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

13. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

14. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

15. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

16. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

17. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

18. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

19. spacer 1.10|903483|26|NC_009483|CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

20. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

21. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

22. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

23. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

24. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

25. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

26. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

27. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

28. spacer 1.10|903483|26|NC_009483|CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 4, identity: 0.846

cacgaacctgaccaacgccaccctga	CRISPR spacer
ccggaacctgaccaacgccacgccga	Protospacer
*  ****************** *.**

29. spacer 2.19|996173|33|NC_009483|PILER-CR matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 4, identity: 0.879

aggagacaaaccatgaacgca-aaaaatcaaatc	CRISPR spacer
aggagacaaaccatgaatgcacaaacatcaaaa-	Protospacer
*****************.*** *** ******  

30. spacer 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 4, identity: 0.875

ggagacaaaccatgaacgca-aaaaatcaaatc	CRISPR spacer
ggagacaaaccatgaatgcacaaacatcaaaa-	Protospacer
****************.*** *** ******  

31. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 5, identity: 0.808

cacgaacctgaccaacgccaccctga	CRISPR spacer
acggaacctgaccaacgccacgccga	Protospacer
   ****************** *.**

32. spacer 1.10|903483|26|NC_009483|CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 5, identity: 0.808

cacgaacctgaccaacgccaccctga	CRISPR spacer
acggaacctgaccaacgccacgccga	Protospacer
   ****************** *.**

33. spacer 1.1|902967|26|NC_009483|CRT matches to NZ_CP022417 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-2, complete sequence) position: , mismatch: 6, identity: 0.769

ttttgatttttcggggctgaacctga	CRISPR spacer
gcgggatttttcggggctgaaccagc	Protospacer
 .  ******************* * 

34. spacer 1.8|903393|26|NC_009483|CRT matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 6, identity: 0.769

gttgagctttgccggcggcactcttg	CRISPR spacer
cgccggctttgccggcggcacgcttg	Protospacer
  . .**************** ****

35. spacer 2.22|996356|33|NC_009483|PILER-CR matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 6, identity: 0.818

gagtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
gcgtctgcggccgcggatcgtgctgttgctgga	Protospacer
* ********* **************   **.*

36. spacer 2.22|996356|33|NC_009483|PILER-CR matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 6, identity: 0.818

gagtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
gcgtctgcggccgcggatcgtgctgttgctgga	Protospacer
* ********* **************   **.*

37. spacer 2.35|995381|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP038146 (Streptomyces sp. S501 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gcatggagtcgttgcggacagccgccgacagg-	CRISPR spacer
tcatggagtggttgccgacagccg-cgatacgc	Protospacer
 ******** ***** ******** ***.* * 

38. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 6, identity: 0.812

agtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
cgtctgcggccgcggatcgtgctgttgctgga	Protospacer
 ********* **************   **.*

39. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 6, identity: 0.812

agtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
cgtctgcggccgcggatcgtgctgttgctgga	Protospacer
 ********* **************   **.*

40. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to NZ_CP014857 (Lysinibacillus sphaericus III(3)7 plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

aattggataatagaataaatgaaaaaacaggc-	CRISPR spacer
agtttgatactagaataaatgaaaaag-agtca	Protospacer
*.** **** ****************. ** * 

41. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to NC_010381 (Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequence) position: , mismatch: 6, identity: 0.812

aattggataatagaataaatgaaaaaacaggc-	CRISPR spacer
agtttgatactagaataaatgaaaaag-agtca	Protospacer
*.** **** ****************. ** * 

42. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to NZ_CP014644 (Lysinibacillus sphaericus strain OT4b.25 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

aattggataatagaataaatgaaaaaacaggc-	CRISPR spacer
agtttgatactagaataaatgaaaaag-agtca	Protospacer
*.** **** ****************. ** * 

43. spacer 2.6|995380|33|NC_009483|PILER-CR matches to NZ_CP038146 (Streptomyces sp. S501 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

ggcatggagtcgttgcggacagccgccgacagg-	CRISPR spacer
ttcatggagtggttgccgacagccg-cgatacgc	Protospacer
  ******** ***** ******** ***.* * 

44. spacer 2.8|995502|33|NC_009483|PILER-CR matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 7, identity: 0.788

gatgatctgtctgatgcggaaatcccgcaggaa----	CRISPR spacer
gatgatgtgtctgatgcggaa----ctcaagaaattg	Protospacer
****** **************    * **.***    

45. spacer 2.29|996783|33|NC_009483|PILER-CR matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 7, identity: 0.788

gcgcgcccgctggccgtggaacgcggatcgttg	CRISPR spacer
gcgcaccagctggccgtggaacgcgccaccctg	Protospacer
****.** *****************   * .**

46. spacer 2.37|995503|32|NC_009483|CRISPRCasFinder,CRT matches to AP018320 (Nostoc sp. HK-01 plasmid plasmid2 DNA, complete genome) position: , mismatch: 7, identity: 0.781

atgatctgtctgatgcggaaatcccgcaggaa----	CRISPR spacer
atgatgtgtctgatgcggaa----ctcaagaaattg	Protospacer
***** **************    * **.***    

47. spacer 2.50|996296|32|NC_009483|CRISPRCasFinder,CRT matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 7, identity: 0.781

ggaccgcggcgagccgattaccccggatgagc	CRISPR spacer
ggatgcaggcgagccgatttcaccggatgaac	Protospacer
***.   ************ * ********.*

48. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP032344 (Azospirillum brasilense strain MTCC4038 plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.781

agtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
tggctgcgccggcggatcgagctgtaccagga	Protospacer
 * ***** ********** *******  *.*

49. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP033323 (Azospirillum brasilense strain Cd plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.781

agtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
tggctgcgccggcggatcgagctgtaccagga	Protospacer
 * ***** ********** *******  *.*

50. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP033317 (Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.781

agtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
tggctgcgccggcggatcgagctgtaccagga	Protospacer
 * ***** ********** *******  *.*

51. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP012919 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p5, complete sequence) position: , mismatch: 7, identity: 0.781

agtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
tggctgcgccggcggatcgagctgtaccagga	Protospacer
 * ***** ********** *******  *.*

52. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agtctgcggcggcggatcg---tgctgtacgtgaa	CRISPR spacer
cgtctgccgcggcggatcgtgatgctctacct---	Protospacer
 ****** ***********   **** *** *   

53. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

agtctgcggcggcggatcg---tgctgtacgtgaa	CRISPR spacer
cgtctgccgcggcggatcgtgatgctctacct---	Protospacer
 ****** ***********   **** *** *   

54. spacer 2.58|996784|32|NC_009483|CRISPRCasFinder,CRT matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 7, identity: 0.781

cgcgcccgctggccgtggaacgcggatcgttg	CRISPR spacer
cgcaccagctggccgtggaacgcgccaccctg	Protospacer
***.** *****************   * .**

55. spacer 2.22|996356|33|NC_009483|PILER-CR matches to NZ_CP032344 (Azospirillum brasilense strain MTCC4038 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.758

gagtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
atggctgcgccggcggatcgagctgtaccagga	Protospacer
. * ***** ********** *******  *.*

56. spacer 2.22|996356|33|NC_009483|PILER-CR matches to NZ_CP033323 (Azospirillum brasilense strain Cd plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.758

gagtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
atggctgcgccggcggatcgagctgtaccagga	Protospacer
. * ***** ********** *******  *.*

57. spacer 2.22|996356|33|NC_009483|PILER-CR matches to NZ_CP033317 (Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.758

gagtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
atggctgcgccggcggatcgagctgtaccagga	Protospacer
. * ***** ********** *******  *.*

58. spacer 2.22|996356|33|NC_009483|PILER-CR matches to NZ_CP012919 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p5, complete sequence) position: , mismatch: 8, identity: 0.758

gagtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
atggctgcgccggcggatcgagctgtaccagga	Protospacer
. * ***** ********** *******  *.*

59. spacer 2.31|995137|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.75

gtgca-agtggtgaagaacatctggaaatggaa	CRISPR spacer
-tatataaccgtgaagaaaatatggaaatggaa	Protospacer
 *..* *.. ******** ** ***********

60. spacer 2.31|995137|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 8, identity: 0.75

gtgca-agtggtgaagaacatctggaaatggaa	CRISPR spacer
-tatataaccgtgaagaaaatatggaaatggaa	Protospacer
 *..* *.. ******** ** ***********

61. spacer 2.32|995198|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP022306 (Thalassococcus sp. S3 plasmid pS3C, complete sequence) position: , mismatch: 8, identity: 0.75

acctgtg-cgggatgcagtggcctgtgccttgt	CRISPR spacer
-tttacgacgggatgcagtggcatgtgcattat	Protospacer
 ..*..* ************** ***** **.*

62. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP040803 (Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence) position: , mismatch: 8, identity: 0.75

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tatttcccattctttttctcctttcctagaaa	Protospacer
 * * *.  ********.******** *****

63. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tatttcccattctttttctcctttcctagaaa	Protospacer
 * * *.  ********.******** *****

64. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP020439 (Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence) position: , mismatch: 8, identity: 0.75

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tatttcccattctttttctcctttcctagaaa	Protospacer
 * * *.  ********.******** *****

65. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP018188 (Streptococcus salivarius strain ICDC2 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tatttcccattctttttctcctttcctagaaa	Protospacer
 * * *.  ********.******** *****

66. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 8, identity: 0.75

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tatttcccattctttttctcctttcctagaaa	Protospacer
 * * *.  ********.******** *****

67. spacer 2.37|995503|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP025980 (Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence) position: , mismatch: 8, identity: 0.75

atgatctgtctgatgcggaaatcccgcaggaa	CRISPR spacer
atgatctttctaatgcggaaatcagtgcggta	Protospacer
******* ***.***********     ** *

68. spacer 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_AF135182 (Serratia entomophila strain A1MO2 plasmid pADAP, complete sequence) position: , mismatch: 8, identity: 0.75

acgcgcccgcccgacatgactgagaaaaacgt	CRISPR spacer
caggagcggcccgtcatgactgagaaaaacga	Protospacer
  * . * ***** ***************** 

69. spacer 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT matches to NC_002523 (Serratia entomophila plasmid pADAP, complete sequence) position: , mismatch: 8, identity: 0.75

acgcgcccgcccgacatgactgagaaaaacgt	CRISPR spacer
caggagcggcccgtcatgactgagaaaaacga	Protospacer
  * . * ***** ***************** 

70. spacer 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP015597 (Mycobacterium sp. YC-RL4 plasmid pMYC1, complete sequence) position: , mismatch: 8, identity: 0.75

acgcgcccgcccgacatgactgagaaaaacgt	CRISPR spacer
ttccgaacccccgacatgactgagaactacgt	Protospacer
 . **  * *****************  ****

71. spacer 2.44|995930|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP049116 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccacacattgttttcgacatagcgggcatgag	CRISPR spacer
tcagcagttgtctccgacatagcgggcatgat	Protospacer
.**   .****.*.***************** 

72. spacer 2.45|995991|32|NC_009483|CRISPRCasFinder,CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 8, identity: 0.75

aacccggtcgtcatgataggcatggaggacat	CRISPR spacer
cacccggtcgtcgagataggcatggtaggcgc	Protospacer
 ***********. *********** .*.*..

73. spacer 2.47|996113|32|NC_009483|CRISPRCasFinder,CRT matches to MN694260 (Marine virus AFVG_250M1009, complete genome) position: , mismatch: 8, identity: 0.75

---tttgattatatcttgttctgccatgcactgat	CRISPR spacer
ggatctg---atatcttgttcttccttgcactggc	Protospacer
   *.**   ************ ** *******..

74. spacer 2.47|996113|32|NC_009483|CRISPRCasFinder,CRT matches to MN694525 (Marine virus AFVG_250M794, complete genome) position: , mismatch: 8, identity: 0.75

---tttgattatatcttgttctgccatgcactgat	CRISPR spacer
ggatctg---atatcttgttcttccttgcactggc	Protospacer
   *.**   ************ ** *******..

75. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP022365 (Azospirillum sp. TSH58 plasmid TSH58_p06, complete sequence) position: , mismatch: 8, identity: 0.75

agtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
tggctgcgccggcggatcgagctgtatcagga	Protospacer
 * ***** ********** ******.  *.*

76. spacer 2.51|996357|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP029359 (Azospirillum sp. CFH 70021 plasmid unnamed4) position: , mismatch: 8, identity: 0.75

agtctgcggcggcggatcgtgctgtacgtgaa	CRISPR spacer
tggctgcgccggcggatcgagctgtatcagga	Protospacer
 * ***** ********** ******.  *.*

77. spacer 2.52|996418|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 8, identity: 0.75

tcggatcgccgtacgctccggtgccggttaat	CRISPR spacer
gccgctcgccgtgagctccggtgccggttcgg	Protospacer
 * * *******. *************** . 

78. spacer 2.53|996479|32|NC_009483|CRISPRCasFinder,CRT matches to MN693941 (Marine virus AFVG_250M763, complete genome) position: , mismatch: 8, identity: 0.75

gctgacgggcggggtttcgtccccgtccagcc	CRISPR spacer
gcaagagggcgaggtttcgtcaccgtccagtg	Protospacer
** .. *****.********* ********. 

79. spacer 2.53|996479|32|NC_009483|CRISPRCasFinder,CRT matches to MN694248 (Marine virus AFVG_250M764, complete genome) position: , mismatch: 8, identity: 0.75

gctgacgggcggggtttcgtccccgtccagcc	CRISPR spacer
gcaagagggcgaggtttcgtcaccgtccagtg	Protospacer
** .. *****.********* ********. 

80. spacer 2.58|996784|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP038235 (Leisingera sp. NJS201 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgcccgctggccgtggaacgcggatcgttg	CRISPR spacer
cctggctgctggccgtggaacccggatggtct	Protospacer
* .* *.************** ***** **. 

81. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to MN694049 (Marine virus AFVG_250M506, complete genome) position: , mismatch: 8, identity: 0.75

aattggataatagaataaatgaaaaaacaggc	CRISPR spacer
aattggattatagaattaatgaaatactaact	Protospacer
******** ******* ******* * .*. .

82. spacer 2.15|995929|33|NC_009483|PILER-CR matches to NZ_CP049116 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

gccacacattgttttcgacatagcgggcatgag	CRISPR spacer
ttcagcagttgtctccgacatagcgggcatgat	Protospacer
 .**   .****.*.***************** 

83. spacer 2.16|995990|33|NC_009483|PILER-CR matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 9, identity: 0.727

gaacccggtcgtcatgataggcatggaggacat	CRISPR spacer
ccacccggtcgtcgagataggcatggtaggcgc	Protospacer
  ***********. *********** .*.*..

84. spacer 2.23|996417|33|NC_009483|PILER-CR matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.727

gtcggatcgccgtacgctccggtgccggttaat	CRISPR spacer
tgccgctcgccgtgagctccggtgccggttcgg	Protospacer
  * * *******. *************** . 

85. spacer 2.24|996478|33|NC_009483|PILER-CR matches to MN694248 (Marine virus AFVG_250M764, complete genome) position: , mismatch: 9, identity: 0.727

ggctgacgggcggggtttcgtccccgtccagcc	CRISPR spacer
tgcaagagggcgaggtttcgtcaccgtccagtg	Protospacer
 ** .. *****.********* ********. 

86. spacer 2.24|996478|33|NC_009483|PILER-CR matches to MN693941 (Marine virus AFVG_250M763, complete genome) position: , mismatch: 9, identity: 0.727

ggctgacgggcggggtttcgtccccgtccagcc	CRISPR spacer
tgcaagagggcgaggtttcgtcaccgtccagtg	Protospacer
 ** .. *****.********* ********. 

87. spacer 2.29|996783|33|NC_009483|PILER-CR matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

gcgcgcccgctggccgtggaacgcggatcgttg	CRISPR spacer
gcgcgcgcgctggccgtggaacccgagatcctc	Protospacer
****** *************** **.. . .* 

88. spacer 2.34|995320|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gccggccgtcttctgggtgacgagaaaatact----	CRISPR spacer
tccgtccgtcttctgggcgacgag----ttccgcga	Protospacer
 *** ************.******    * *.    

89. spacer 2.37|995503|32|NC_009483|CRISPRCasFinder,CRT matches to CP036360 (Agrobacterium sp. 33MFTa1.1 plasmid p_JBx_073812, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctgtctgatgcggaaatc-----ccgcaggaa	CRISPR spacer
gtgatctgcctgatgctgaaatccacatcctc-----	Protospacer
.*******.******* ******     ** *     

90. spacer 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT matches to NC_014155 (Thiomonas intermedia K12 plasmid pTINT02, complete sequence) position: , mismatch: 9, identity: 0.719

acgcgcccgcccgacatgactgagaaaaacgt	CRISPR spacer
gcccaatggcccgacatgacggagaaaaccgg	Protospacer
.* *. . ************ ******* ** 

91. spacer 2.53|996479|32|NC_009483|CRISPRCasFinder,CRT matches to MG962374 (Mycobacterium phage Paola, complete genome) position: , mismatch: 9, identity: 0.719

gctgacgggcggggtttcgtccccgtccagcc	CRISPR spacer
gtgctcctgcgggctttcgtccccgtgcagct	Protospacer
*.   *  ***** ************ ****.

92. spacer 2.53|996479|32|NC_009483|CRISPRCasFinder,CRT matches to MF185720 (Mycobacterium phage Guillsminger, complete genome) position: , mismatch: 9, identity: 0.719

gctgacgggcggggtttcgtccccgtccagcc	CRISPR spacer
gtgctcctgcgggctttcgtccccgtgcagct	Protospacer
*.   *  ***** ************ ****.

93. spacer 2.55|996601|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP041156 (Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

agttctcctccagcgatttgctggcggaggca	CRISPR spacer
gctcctcctccagcgttttgatggcggcgctg	Protospacer
. *.*********** **** ****** * ..

94. spacer 2.58|996784|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgcccgctggccgtggaacgcggatcgttg	CRISPR spacer
cgcgcgcgctggccgtggaacccgagatcctc	Protospacer
***** *************** **.. . .* 

95. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to MT075580 (Lysinibacillus sphaericus strain SSII-1 plasmid pSSII-1, complete sequence) position: , mismatch: 9, identity: 0.719

aattggataatagaataaatgaaaaaacaggc	CRISPR spacer
agtttgatactagaataaatgaaaaagagtct	Protospacer
*.** **** ****************. .  .

96. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to NZ_LR215038 (Mycoplasma maculosum strain NCTC10168 plasmid 2) position: , mismatch: 9, identity: 0.719

aattggataatagaataaatgaaaaaacaggc	CRISPR spacer
aaaattataatagaattaattaaaaaacacta	Protospacer
**    ********** *** ********   

97. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 9, identity: 0.719

aattggataatagaataaatgaaaaaacaggc	CRISPR spacer
aatttgaaaatagaataaatgaacttgtagaa	Protospacer
**** ** ***************   ..**. 

98. spacer 4.1|2778036|32|NC_009483|CRISPRCasFinder matches to KU517658 (Clostridium phage HM T, complete genome) position: , mismatch: 9, identity: 0.719

aattggataatagaataaatgaaaaaacaggc	CRISPR spacer
aaaaggagaatagaatgaatgaaaaaattaaa	Protospacer
**  *** ********.**********. .. 

99. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 10, identity: 0.688

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
aaatggtatttctttgtttcctttttttgttt	Protospacer
.**** ********* ********..  *   

100. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 10, identity: 0.688

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
aaatggtatttctttgtttcctttttttgttt	Protospacer
.**** ********* ********..  *   

101. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP046373 (Spiroplasma citri strain LB 319 plasmid pScpLB319-2, complete sequence) position: , mismatch: 10, identity: 0.688

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
aaatggtatttctttgtttcctttttttgttt	Protospacer
.**** ********* ********..  *   

102. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP047438 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-1, complete sequence) position: , mismatch: 10, identity: 0.688

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
aaatggtatttctttgtttcctttttttgttt	Protospacer
.**** ********* ********..  *   

103. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP047444 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-7) position: , mismatch: 10, identity: 0.688

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
aaatggtatttctttgtttcctttttttgttt	Protospacer
.**** ********* ********..  *   

104. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to AP014075 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C25-MedDCM-OCT-S27-C255, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tgttgccatttgtttttttcctttcctgggtt	Protospacer
 . ***.**** ************** .*.  

105. spacer 2.50|996296|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggaccgcggcgagccgattaccccggatgagc	CRISPR spacer
cttccgcggcgagccgctgaccccggtgccgg	Protospacer
   ************* * *******    * 

106. spacer 2.50|996296|32|NC_009483|CRISPRCasFinder,CRT matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

ggaccgcggcgagccgattaccccggatgagc	CRISPR spacer
cttccgcggcgagccgctgaccccggtgccgg	Protospacer
   ************* * *******    * 

107. spacer 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP031445 (Acinetobacter baumannii strain MDR-UNC plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcggggtaattgattggcaagatgaagagct	CRISPR spacer
tcggcagtaattgatttgcaagctgaagaagc	Protospacer
   * .********** ***** ******. .

108. spacer 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP040426 (Acinetobacter baumannii strain PB364 plasmid pPB364_1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcggggtaattgattggcaagatgaagagct	CRISPR spacer
tcggcagtaattgatttgcaagctgaagaagc	Protospacer
   * .********** ***** ******. .

109. spacer 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP029570 (Acinetobacter baumannii strain DA33098 plasmid pDA33098-108, complete sequence) position: , mismatch: 10, identity: 0.688

ggcggggtaattgattggcaagatgaagagct	CRISPR spacer
tcggcagtaattgatttgcaagctgaagaagc	Protospacer
   * .********** ***** ******. .

110. spacer 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP027122 (Acinetobacter baumannii strain AR_0056 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcggggtaattgattggcaagatgaagagct	CRISPR spacer
tcggcagtaattgatttgcaagctgaagaagc	Protospacer
   * .********** ***** ******. .

111. spacer 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP027608 (Acinetobacter baumannii strain AR_0102 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ggcggggtaattgattggcaagatgaagagct	CRISPR spacer
tcggcagtaattgatttgcaagctgaagaagc	Protospacer
   * .********** ***** ******. .

112. spacer 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP026705 (Acinetobacter baumannii strain AR_0056 plasmid tig00000058_pilon, complete sequence) position: , mismatch: 10, identity: 0.688

ggcggggtaattgattggcaagatgaagagct	CRISPR spacer
tcggcagtaattgatttgcaagctgaagaagc	Protospacer
   * .********** ***** ******. .

113. spacer 2.54|996540|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP035046 (Acinetobacter baumannii strain ABUH793 plasmid p107.0Kbp, complete sequence) position: , mismatch: 10, identity: 0.688

ggcggggtaattgattggcaagatgaagagct	CRISPR spacer
tcggcagtaattgatttgcaagctgaagaagc	Protospacer
   * .********** ***** ******. .

114. spacer 2.55|996601|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP021031 (Rhizobium sp. NXC14 plasmid pRspNXC14a, complete sequence) position: , mismatch: 10, identity: 0.688

agttctcctccagcgatttgctggcggaggca	CRISPR spacer
atccttccaccggcgatttgctggcggatctg	Protospacer
* ...*** **.****************  ..

115. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP054567 (Bacillus thuringiensis strain FDAARGOS_791 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tcttgctatttcttttatacctttcccctttt	Protospacer
   ************* * *******      

116. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 11, identity: 0.656

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
aaatggtatttctttgtttccttttttgtttt	Protospacer
.**** ********* ********.. .    

117. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NC_016794 (Bacillus cereus F837/76 plasmid pF837_55, complete sequence) position: , mismatch: 11, identity: 0.656

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tcttgctatttcttttatacctttcccctttt	Protospacer
   ************* * *******      

118. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NC_008598 (Bacillus thuringiensis str. Al Hakam plasmid pALH1, complete sequence) position: , mismatch: 11, identity: 0.656

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tcttgctatttcttttatacctttcccctttt	Protospacer
   ************* * *******      

119. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP009599 (Bacillus thuringiensis strain HD571 plasmid pBFQ, complete sequence) position: , mismatch: 11, identity: 0.656

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tcttgctatttcttttatacctttcccctttt	Protospacer
   ************* * *******      

120. spacer 2.36|995442|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP053982 (Bacillus thuringiensis strain FDAARGOS_793 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

gaatgctatttctttttttcctttccgagaaa	CRISPR spacer
tcttgctatttcttttatacctttcccctttt	Protospacer
   ************* * *******      

121. spacer 2.39|995625|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP014677 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_3, complete sequence) position: , mismatch: 11, identity: 0.656

acgcgcccgcccgacatgactgagaaaaacgt	CRISPR spacer
tgtaacccgcaccacatgactgagaaaattcc	Protospacer
    .***** * *************** . .

122. spacer 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT matches to AGRM01000007 (Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A2, complete sequence, whole genome shotgun sequence) position: , mismatch: 11, identity: 0.656

ggagacaaaccatgaacgcaaaaaatcaaatc	CRISPR spacer
ctgagaaaaccatgagcgcagaaaatcaatct	Protospacer
  ... *********.****.******** ..

123. spacer 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP030218 (Salmonella enterica strain SA20075157 plasmid pSA20075157.1, complete sequence) position: , mismatch: 11, identity: 0.656

ggagacaaaccatgaacgcaaaaaatcaaatc	CRISPR spacer
ctgagaaaaccatgagcgcagaaaatcaatct	Protospacer
  ... *********.****.******** ..

124. spacer 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP025255 (Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence) position: , mismatch: 11, identity: 0.656

ggagacaaaccatgaacgcaaaaaatcaaatc	CRISPR spacer
ctgagaaaaccatgagcgcagaaaatcaatct	Protospacer
  ... *********.****.******** ..

125. spacer 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT matches to CP053415 (Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ggagacaaaccatgaacgcaaaaaatcaaatc	CRISPR spacer
ctgagaaaaccatgagcgcagaaaatcaatct	Protospacer
  ... *********.****.******** ..

126. spacer 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT matches to CP053327 (Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ggagacaaaccatgaacgcaaaaaatcaaatc	CRISPR spacer
ctgagaaaaccatgagcgcagaaaatcaatct	Protospacer
  ... *********.****.******** ..

127. spacer 2.48|996174|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP030289 (Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence) position: , mismatch: 11, identity: 0.656

ggagacaaaccatgaacgcaaaaaatcaaatc	CRISPR spacer
ctgagaaaaccatgagcgcagaaaatcaatct	Protospacer
  ... *********.****.******** ..

128. spacer 2.52|996418|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_LR134470 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence) position: , mismatch: 11, identity: 0.656

tcggatcgccgtacgctccggtgccggttaat	CRISPR spacer
ctcccgcgccgtccgcttcggtgccggttcgg	Protospacer
..    ****** ****.*********** . 

129. spacer 2.52|996418|32|NC_009483|CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 11, identity: 0.656

tcggatcgccgtacgctccggtgccggttaat	CRISPR spacer
cgaactcgtcgcacgctccggtgccggtctca	Protospacer
. .. ***.**.****************.   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 65147 : 146431 52 Staphylococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_2 1989380 : 1997947 8 uncultured_Mediterranean_phage(66.67%) tRNA NA
DBSCAN-SWA_3 3329454 : 3340489 12 Virus_Rctr41k(50.0%) transposase,integrase attL 3325479:3325491|attR 3335645:3335657
DBSCAN-SWA_4 3601871 : 3684577 36 Paenibacillus_phage(42.86%) transposase,integrase attL 3618060:3618078|attR 3682785:3682803
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NC_009483.1|WP_011939723.1|3337937_3338558_+|hypothetical-protein 3337937_3338558_+ 206 aa aa NA NA NA 3329454-3340489 yes