CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_009726	Coxiella burnetii Dugway 5J108-111 plasmid pQpDG, complete sequence	0 crisprs	NA	0	0	0	0
NC_009727	Coxiella burnetii Dugway 5J108-111, complete sequence	0 crisprs	cas1,cas8f,cas5f,cas7f,cas6f,DEDDh,cas3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1779961 : 1788917

uncultured_Mediterranean_phage(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011997270.1\|1779961_1780741_-	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	2.1e-32	32.9
WP_010957485.1\|1780768_1781416_+	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	3.4e-23	31.0
WP_011997271.1\|1781412_1782882_+	CBU_0295 family Dot/Icm type IV secretion system effector	NA	NA	NA	NA
WP_005771434.1\|1782878_1784294_-	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.5e-52	29.9
WP_011997272.1\|1784271_1784757_-	dUTP diphosphatase	Q2NP83	Xanthomonas_phage	1.5e-47	58.0
WP_005771440.1\|1785060_1785735_+	DNA repair protein RadC	NA	NA	NA	NA
WP_005771445.1\|1785828_1786068_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_005771448.1\|1786078_1786291_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_005771450.1\|1786304_1786550_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	3.3e-16	51.1
WP_005771452.1\|1786564_1787044_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	3.1e-26	42.6
WP_005771454.1\|1787040_1787601_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_011997273.1\|1787597_1788917_-	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	1.5e-25	32.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage