CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NC_009636	Sinorhizobium medicae WSM419, complete sequence	1 crisprs	csa3,WYL,RT,cas3,DEDDh	7
NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	0 crisprs	csa3,RT	2
NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	0 crisprs	csa3,DEDDh,WYL,RT	1
NC_009622	Sinorhizobium medicae WSM419 plasmid pSMED03, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_009636_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_009636_1

795307-795401

Orphan

Consensus_repeat	Method
GCGCGGACGGTCGTCGCGGTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_009636_1

>merge|NC_009636|1|795307-795401|CRISPRCasFinder
GCGCGGACGGTCGTCGCGGTCGCCACGGTCCGGACGCGGACCACGATCGTCACGCGGGCCACGGCCTTCGCCGCGAGGACGGTCGTCGCGGTCGC

>NC_009636|1|1|795307-795401|CRISPRCasFinder
GCGCGGACGGTCGTCGCGGTCGC	CACGGTCCGGACGCGGACCACGATCGTCACGCGGGCCACGGCCTTCGCC
GCGAGGACGGTCGTCGCGGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_009636.1\|WP_024311239.1\|787142_787844_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NC_009636.1\|WP_011974944.1\|798788_799526_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|171820
NC_009636.1\|WP_011974949.1\|805782_807510_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|224490
NC_009636.1\|WP_011974947.1\|803184_804825_-\|5-guanidino-2-oxopentanoate-decarboxylase	unknown	unknown	gnl\|CDD\|236041
NC_009636.1\|WP_003531693.1\|795008_795257_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NC_009636.1\|WP_011974942.1\|796424_797468_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|381320
NC_009636.1\|WP_011974933.1\|787840_788143_+\|membrane-protein	unknown	unknown	gnl\|CDD\|226916
NC_009636.1\|WP_011974946.1\|801943_803143_+\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|224475
NC_009636.1\|WP_011974931.1\|786213_787071_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NC_009636.1\|WP_011974943.1\|797819_798764_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NC_009636.1\|WP_011974948.1\|804826_805789_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|349766
NC_009636.1\|WP_011974934.1\|788167_789667_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181676
NC_009636.1\|WP_011974937.1\|792064_793132_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NC_009636.1\|WP_011974936.1\|790437_792048_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NC_009636.1\|WP_011974941.1\|796065_796398_+\|four-helix-bundle-copper-binding-protein	unknown	unknown	gnl\|CDD\|153434
NC_009636.1\|WP_011974945.1\|800390_801656_+\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|235987
NC_009636.1\|WP_011974939.1\|793865_794819_-\|hypothetical-protein	unknown	unknown	unknown
NC_009636.1\|WP_011974938.1\|793255_793831_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NC_009636.1\|WP_003531676.1\|799845_800082_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NC_009636.1\|WP_011974935.1\|789988_790441_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670

Protein	Function_ID	Function_description	E-value
NC_009636.1\|WP_024311239.1\|787142_787844_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	2.87993e-60
NC_009636.1\|WP_011974944.1\|798788_799526_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|171820	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed.	1.74628e-169
NC_009636.1\|WP_011974949.1\|805782_807510_-\|amidohydrolase	gnl\|CDD\|224490	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].	1.436e-107
NC_009636.1\|WP_011974947.1\|803184_804825_-\|5-guanidino-2-oxopentanoate-decarboxylase	gnl\|CDD\|236041	PRK07524, PRK07524, 5-guanidino-2-oxopentanoate decarboxylase.	0
NC_009636.1\|WP_003531693.1\|795008_795257_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	3.95249e-37
NC_009636.1\|WP_011974931.1\|786213_787071_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.52128e-28
NC_009636.1\|WP_011974933.1\|787840_788143_+\|membrane-protein	gnl\|CDD\|226916	COG4541, COG4541, Predicted membrane protein [Function unknown].	1.86209e-19
NC_009636.1\|WP_011974946.1\|801943_803143_+\|endolytic-transglycosylase-MltG	gnl\|CDD\|224475	COG1559, COG1559, Aminodeoxychorismate lyase [Coenzyme transport and metabolism].	9.0983e-153
NC_009636.1\|WP_011974942.1\|796424_797468_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	1.93064e-167
NC_009636.1\|WP_011974943.1\|797819_798764_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	2.31286e-138
NC_009636.1\|WP_011974948.1\|804826_805789_-\|GTP-binding-protein	gnl\|CDD\|349766	cd03112, CobW-like, cobalamin synthesis protein CobW. The function of this protein family is unknown. The amino acid sequence of YjiA protein in E. coli contains several conserved motifs that characterize it as a P-loop GTPase. YijA gene is among the genes significantly induced in response to DNA-damage caused by mitomycin. YijA gene is a homologue of the CobW gene which encodes the cobalamin synthesis protein/P47K.	1.64306e-70
NC_009636.1\|WP_011974934.1\|788167_789667_-\|replicative-DNA-helicase	gnl\|CDD\|181676	PRK09165, PRK09165, replicative DNA helicase; Provisional.	0
NC_009636.1\|WP_011974937.1\|792064_793132_+\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	8.5749e-105
NC_009636.1\|WP_011974936.1\|790437_792048_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	8.92545e-16
NC_009636.1\|WP_011974941.1\|796065_796398_+\|four-helix-bundle-copper-binding-protein	gnl\|CDD\|153434	cd08026, DUF326, Cysteine-rich 4 helical bundle widely conserved in bacteria. This functionally uncharacterized protein forms a 4-helical bundle with a bromodomain-like topology. It is present in major bacterial lineages and contains highly conserved cysteines in a repeated pattern, whose sidechains appear buried. Some family members have been (mis)annotated as putative ferredoxins.	4.59932e-23
NC_009636.1\|WP_011974945.1\|800390_801656_+\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|235987	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II.	0
NC_009636.1\|WP_011974938.1\|793255_793831_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	2.27333e-64
NC_009636.1\|WP_003531676.1\|799845_800082_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	3.25258e-33
NC_009636.1\|WP_011974935.1\|789988_790441_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.97884e-18

>NC_009636.1|WP_003531693.1|795008_795257_-|30S-ribosomal-protein-S18
MAEVSSAPVRRPFHRRRKTCPFSGANAPRIDYKDVRLLQRYISERGKIVPSRITAVSQKKQRELAQAIKRARFLGLLPYIVS
>NC_009636.1|WP_011974939.1|793865_794819_-|hypothetical-protein
MQNWNRTSLLTGALAGITAALLSMGANTQSSLAIVLYAASALPILIAGLGWGNAAAFGGIVVAGGAAVALVSPYFALLIVVVTLVPAGWLSHLSNLARPADELGGPEGSLAWYPLSDILVHLAGLVTAGMIIVGYIVGYDSSVSGIMVDMVIDAVKAQEPLYNPDAAAIAQLKSIFTLALPLVQGAIWVLMLFSAYYLATRIVQLSGKALRPREDIPSSLRMNRNAIFVFLAGLTLTFFGGAPAVVGALVCGTFGAGFLLSGFASFHFRTRGKSWRLPVLWIAYLSVFIFTIPAFFFLLTGLTDTRRAIALTPTGKN
>NC_009636.1|WP_011974938.1|793255_793831_-|50S-ribosomal-protein-L9
MEVILLERIAKLGQMGETVKVRDGFARNYLLPLGKALRANASNKARFEAERSTLEARNLERKSEAQKVAESLDGKSFIIVRSAGETGQLYGSVAARDIVETLAAEGFNINRNQVDLNQPIKAIGLHTVTLHLHGEVDVAIEINVARSAEEAERQAKGESLTSADAIYGVDEDALKPEDFFNPEAEIESEEE
>NC_009636.1|WP_011974937.1|792064_793132_+|HlyD-family-secretion-protein
MLKHFRSPSTLVVLVAGLAGLSLVLYAWRLPPFASSVETTENAYVRGYVTTISPQLAGYVAEVPVRDYEEVKAGQLLARIDDRIFVQKLAQAKAMLATQRAALANSFEQELSAKAGITASEAQLDGAKAALATARATWDRIRPLADKGVATRSDADQARAAFQQAEAGVKQAIANLEVSRQSLATTLGARAGLQGSVSGAEAAVELAQIDLDNTRIVAPRAGRLGEIGARVGQYVTAGTQLVSVVPHDVWIVANFKETQLDGMRVGQPVTIWVDALKRQELKGHIERFSPAAGSEFSIIRPDNATGNFTKVAQRLGVRIAVDPEQPLAERLAPGLSVVVKVDKAAEPQASIASAG
>NC_009636.1|WP_011974936.1|790437_792048_+|MFS-transporter
MTSNAAPQPSLPAQMAPGKSALYIAGSAFLFLTQGLGLNLASANLAQVQGSLSATSVEAAWLAAAYMAPNVSLSAALVKIRAQYGLRRFAELGIAGFVIASLMNVFVSDLHSAIVVRFISGIAAAPLSSLGFLYMLEAFSPERKLTIGLALALTCTTLAAPVTRLISPQLIEIGQWHGLYTLEMALSLLALPIIYLLPLTPVPHGKVIQRTDISSYLLLAVGFGCLAVVLAMGRLYWWFEAPWLGVLLALSVVTLTTVILIELNREQPLIDVRWLASREIVHFAVVLLIFRLVASEQSAIATSFYQLLGLQYDQLATLYWIILAASVGGGLLCAALMDPARADVVHVLALSMITVGAYMDSHATSLTRPEQMYVSQALVSAGSALFLPPAMARGFRSALAKGPNYILSFIVVFLFTQSIGGLMGSAAFGTFVTLREKFHANVLAEQIVLTNPFVAQRIGQLSGGYASAIGDKALLHGEGVALLGRSITRESNILAYNDAFLLIAIIAVFALAVLLVQVGVKRLARPGLNAASAALH
>NC_009636.1|WP_011974935.1|789988_790441_+|MarR-family-transcriptional-regulator
MSETKVSRELFDALATVNRKLRSVFDARVKERGLTLPRARMLFALARKEGLNQRELAEELDIETPTIVRLLDGMENQGFIERRVELSDRRAKQIYMTVSGRALAEEIQKLASDIREEVLGGLRPEEIAGALKVVNTIATNIQSIGRSGGR
>NC_009636.1|WP_011974934.1|788167_789667_-|replicative-DNA-helicase
MNDAARKLAPLAKDQAEQHYREAPNNLEAEQALLGAILVNNDAYYRVSDFLKPVHLYEPLHRRIFEIAGEIIRMGKTANPVTVKTFLKADDKVGDLTVAQYLARLAAEAVSIINAEDYGRAIYDLALRRSLITIGEDMVNIAYDAPLDMPPQNQIEDAERRLFELAETGRYDGGFQSFNDAVALAIDMAGQAFERDGHLSGISTGIHSLDSKMGGLQRSDLIILAGRPGMGKTSLATNIAYNIAASYDPEVQPDGSFKAKNGGVVGFYSLEMSSEQLATRIISEQTEVSSSKIRRGEISEADFEKLVACSQMMQKVPLYIDQTGGISIAQLAARARRLKRQRGLDVLVVDYIQLMTGSKKSGENRVQEITEITTGLKALGKELNVPIIALSQLSRAVESREDKRPQLSDLRESGSIEQDADVVLFVFREEYYVKNVEPRDEFDPKYEEWKMQMEKVKGTADVIIAKQRHGPTGTVKLAFQSEFTRFSDLADPSFTQYEH
>NC_009636.1|WP_011974933.1|787840_788143_+|membrane-protein
MTLDPHTLLAIVTMAAATILTRLGGLVLIRFVTIGPKQKRALEAIPPAVLMAVIAPTALVTGPAETLAALATALVAMRLPLLAAVATGVMVVALARMFGA
>NC_009636.1|WP_024311239.1|787142_787844_+|branched-chain-amino-acid-ABC-transporter-permease
MKKTRAVEEFCGGFRAMAPLIVAVMPIGLVFGAIAATKGLSSLETFLMSALVFAGGSQFVALDIWAHPASWAALGFSALLVNIRHLLMSASIGTKMPAFSGPAKYAAMLLLADEIWAMAEVRAGETRLTPAWYAGLALPFYLVWVMAGLAGSLAGAFLGGPKALGLDFAFPAVFIVLLIGFWKGRGTGAVLAASAAAAVLAHQFLPGVWYIAAGAAAGVIAALFTGERQEACA
>NC_009636.1|WP_011974931.1|786213_787071_+|AraC-family-transcriptional-regulator
METISQEKAIEAMPLEGVERTRFWRDARFKGMECLSATFITHEFAPHAHDTFSIGAIEAGSQISTIKGERSQTGPGDLYLINPDEIHDGHPGHDGYRYRMIYPSSELLVETIEDVTGRSFKGTPSFSRLLLTDRELAVGFHRAHRALEGKVGTLEADESMFGFLARLFERHGSAIIVPLQTRESSAVHRARDYLVGNYRFDVGLEELAKVAGLSRAHLIRAFRKEFHITPHAFLTDKRVREAKALLRKGWSAADTAYYCGFADQAHFSRHFKARTGVTPRAYRSA
>NC_009636.1|WP_011974941.1|796065_796398_+|four-helix-bundle-copper-binding-protein
MAHFDPKMQECIENCLACYRVCLSTAMSHCLEAGGEHTKPPHFRLMMACAEICRDAAHFMLLGTPHHKHLCGECAEICAECAQDCERIGDMADCVDACRRCAESCRQMAA
>NC_009636.1|WP_011974942.1|796424_797468_-|NADP-dependent-oxidoreductase
MRYNTLGRTGIKVSSICLGTMTWGSQNTPVEAHEQLDYAFDRGVNFIDTAELYPTTPLSAETYGNTERIIGDWLTSRGRRDDVVVATKVAGSGRSYIRNGEPITPEGIGEAVDASLKRLRTDYIDLYQLHWPNRGHYHFRNAWSYDPSRQEKEEVAADLKAILDKLGDVVKAGKIRAVGLSNDTAWGAMKMLDLSNRYGFPRVATIQNEYNLLYRSYDLDLAEVSHHEDIGLLAYSPLAAGLLTGKYLGGARPAGSRLSINGDLGGRFTPHQEPAVAAYTALARENGLDPAQMAIAFCITRPFMASAIIGATSMEQLKNDIGAADVELSQDVMNGIRRLHRLYPAPI
>NC_009636.1|WP_011974943.1|797819_798764_+|ACP-S-malonyltransferase
MSIAFTFPGQGSQAVGMGKDLAEAFPEAAAVFAEVDEALGEKLSHIMWDGPEETLTLTANAQPALMAVSMAVIRVLESRGLDIGSKVSFVAGHSLGEYSALCAAGTFSLADTARLLRIRGNAMQAAVPVGKGAMAAIIGLEHADVEAICRESSSLGSCQIANDNGGGQLVISGEKPAVEKAAALATEKGAKRALMLPVSAPFHSALMTPAAEAMREALATVGKHDPVVPVVANVLAAPVRDAVEIARLLVEQVTGPVRWRETVEWFAANDVTTLYEIGSGKVLTGLARRIDKSVTGIAVNSPADIDAVLAVLLA
>NC_009636.1|WP_011974944.1|798788_799526_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MFDLSGRKALVTGASGGIGEEIARLLHAQGAVVGLHGTRVEKLEALADTLGERVHIFPANLSDRAEVKALGEKAEADLGGVDILVNNAGITKDGLFVRMSDEDWDNVIEVNLTAVFRLTRELTHPMMRRRFGRIVNITSIVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEGIMSAIPMRRMGNGAEVASAVAYLASNEAGYVTGQTIHVNGGMAMI
>NC_009636.1|WP_003531676.1|799845_800082_+|acyl-carrier-protein
MSDIAERVKKIVIDHLGVDAEKVSEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAADSILTVGDAVKFIEKAQA
>NC_009636.1|WP_011974945.1|800390_801656_+|beta-ketoacyl-ACP-synthase-II
MRRVVITGTGMVSPLGCGTEVSWSRLLAGDNAARRVTEFEVEDLPAKIACRIPFGDGSDGTFNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWNPETDEDQISTGVLIGSGIGGLEGIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGDASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPQKASRPYDADRDGFVMGEGAGIVILEELEHAKARGAKIYAEVIGYGLSGDAFHITAPSENGEGAYRCMQMAMKRAGISAADIDYINAHGTSTMADTIELGAVERLVGDSGSKISMSSTKSAIGHLLGAAGAVEAIFSALAIRDNIAPPTLNLDNPSVETKIDLVPHSARKREINVALSNSFGFGGTNASLILRRYAGH
>NC_009636.1|WP_011974946.1|801943_803143_+|endolytic-transglycosylase-MltG
MSDSNDNSAVQFGRNETGSNGPIIPKSANEALRPERVPHPPKRSRKARSQVVIFLNFVMTAVVFVALAAAGAVYYAMHEYEKAGPLQANKNFIVRSGAGISEIASNLERNEIITDSRVFRFVSEAYLSNDTLKAGEYEIKAHASMQEIMQLLKSGKSILYSVSLPEGLTVKQMFRKLSDDPVLVGDLPAELPPEGSLKPDTYKFTRGTDRNEIVKQMIAAQKALVQQIWEKRDPDLPVSTIEEFVTLASIVEKETGRADERPRVASVFINRLEKGMRLQSDPTIIYGIFGGEGKPADRAILRSDLDKQTPYNTYLIKGLPPTPIANPGRAALEAVANPSRTPELYFVADGTGGHVFAETLDEHNANVRRWRKLEAERAAEAAKATEAAEDAVTQTGTQQ
>NC_009636.1|WP_011974947.1|803184_804825_-|5-guanidino-2-oxopentanoate-decarboxylase
MKTVGLYLVELLAAYGVDTVFGIPGVHTVEMYRGLPRSGIRHFTPRHEQGAGFMADGYARATGKPGVCFIISGPGLTNIATAMAQAYGDSVPMLVITSVNPPGRMGSGEGHLHELPDQRQLGRQFTAFSHTILRADELAQVVARAFAVFASARPRPVHIELPVDLLTADASALPPARKRPVPSRPAAEPQAVAAAAALCTAALRPIILAGGGAADAAVPMRRLAEALDAPVIMTVNGRGVLPAGHPLGVPCSPAMEATRALIETADLVIAAGTEFGPTDYDFYETGGARIGGKLIRIDIDAEQAMRGRPADQALISDAALALEALAAAVSPRPPGDGAARAKLARSGVRKALNPILRAGAHLMEVVRDTLPGVVIVGDSAQPVYAGCIDYAATRPRSWFCSATGYGTLGYALPAATGALIGTRRPTVCLIGDGGIQFTLPELGSAREAELPLIVLLWNNNGYGEIKSYMETRGIEPIGVDIFTPDFLTISRGFGCEAHRMKDHRELPALLEAALLRRCPTVIEIVEADYIAAINGQEEPALPAVAE
>NC_009636.1|WP_011974948.1|804826_805789_-|GTP-binding-protein
MVTSAGPLPVTVIGGFLGAGKTTLVNHILGGDHGLKIAVLVNDFGAINIDTALITSMEGGLYNLSNGCVCCGLNQGLVEQLEALLTERPDVDHILIEASGVADPGRIMDTVLYARFSGRLRGDAVLVLADAAGFDDAIAIAPGLAEAQVGSADLLILNKTDLATRDALDAWRKRWSFADSRIVETENARVPFSILFAGETLARDPASAFAATSVHEQAESVTWRHHEPIDAKRLHAVLATLPTGIYRAKGFVTASDGRCFTVHVVGTRVTFQPLARLPEGLGVENLLVLIGFGQGLEFERILAQLDGCAGRPRSIENGEA
>NC_009636.1|WP_011974949.1|805782_807510_-|amidohydrolase
MRSLYDHRPSHAARSAQADLVLTNGQIYTGDPGLPWCRALAVAGGRIVARGERADMEHLIGAQTEVTDLGGRFAMPGLYDMHTHPDLALAPRYAEDLDIGLVDPTPDQVRNAVLAYAARYPDREWIYGQYFVRYTFRQAGLVPGRDWLDAVMPDRPVALLDRMWGTMMVNSEALLRAGINADTPDPLNGYFERDPVSGEPTGLLIDGAYALIHAAMPATPVAVLRAAYRDGIRYQSARGVVATKYVHVCENRLNALQSLDQSGELTLRVEAAISWQDDIFPVRRRWELLAGERHYYRSARLDASAVKFHFDGTVEPRSSYLMTPWDGANSAWRGKLNLTPEHLADMIWDMDRQGIRVIAHCTGDAASDTFLDAVEAARRRPGGLGVRHQCAHSTILHGSNLKRFRDLNVTAEFSPVAWYPSKFVSGARSGYGPERLSRAYNIKGVLEAGGVAVVGTDWPVSPLDPWIALETMVTRANPWDEAEGRFGEPISLTQAIDVMTKNGAWSMGIEHEAGTLEIGKSADIIVLDRNLFEVEPQGNIHSTRVDLTFVQGQLVHDRLNGASNAVWHGEAPKLW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1237754 : 1249156

uncultured_Mediterranean_phage(80.0%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011975330.1\|1237754_1238789_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	1.6e-22	42.7
WP_011975331.1\|1238890_1239709_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.2e-32	34.7
WP_011975332.1\|1239701_1240430_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.4e-38	44.0
WP_020487294.1\|1240506_1241616_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.3e-11	34.4
WP_011975334.1\|1241854_1242061_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	3.7e-08	69.8
WP_011975335.1\|1242133_1242802_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_011975336.1\|1242798_1243641_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	5.0e-43	41.9
WP_011975337.1\|1243772_1245056_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.2e-102	47.2
WP_011975338.1\|1245157_1245928_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.8e-22	30.1
WP_011975339.1\|1245924_1246578_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.5e-15	34.9
WP_011975340.1\|1246740_1247391_+	biotin biosynthesis protein BioC	NA	NA	NA	NA
WP_011975341.1\|1247626_1249156_+	peptidoglycan DD-metalloendopeptidase family protein	I3PV24	Clostridium_phage	6.7e-14	31.2

DBSCAN-SWA_2

1381533 : 1425267

Rhizobium_phage(28.0%)

protease,tail,tRNA,transposase,head,portal,terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011975447.1\|1381533_1382907_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_011971073.1\|1383032_1384034_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	3.3e-25	29.5
WP_011975448.1\|1384193_1385048_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_011975449.1\|1385051_1385831_-	TatD family hydrolase	NA	NA	NA	NA
WP_011975450.1\|1385845_1387396_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.3e-102	38.6
WP_011975451.1\|1387599_1388631_-	DNA polymerase III subunit delta'	S5WKH4	Pseudomonas_phage	3.4e-09	28.4
WP_011975452.1\|1388627_1389332_-	dTMP kinase	M1PSC7	Streptococcus_phage	5.1e-33	39.3
WP_011975453.1\|1389389_1390544_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	8.6e-46	33.2
WP_011975454.1\|1390600_1391641_-	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	4.4e-17	50.0
WP_164923087.1\|1392363_1392552_+	hypothetical protein	NA	NA	NA	NA
WP_011975456.1\|1392609_1392855_+	hypothetical protein	NA	NA	NA	NA
WP_011975457.1\|1393029_1393356_-	hypothetical protein	NA	NA	NA	NA
WP_164923088.1\|1393447_1393711_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_164923106.1\|1394079_1395969_+	hypothetical protein	NA	NA	NA	NA
WP_011975460.1\|1395968_1396283_+	hypothetical protein	NA	NA	NA	NA
WP_011975461.1\|1396279_1396540_+	hypothetical protein	A0A141GEZ4	Brucella_phage	7.4e-14	50.8
WP_011975462.1\|1396639_1396972_+	hypothetical protein	NA	NA	NA	NA
WP_011975463.1\|1397014_1397209_+	hypothetical protein	NA	NA	NA	NA
WP_011975464.1\|1397299_1397743_+	hypothetical protein	NA	NA	NA	NA
WP_164923089.1\|1397751_1398723_-	ATP-dependent DNA ligase	A0A076GD42	Sinorhizobium_phage	1.3e-124	66.9
WP_011975466.1\|1398854_1399307_+	hypothetical protein	NA	NA	NA	NA
WP_164923090.1\|1399585_1399933_+	hypothetical protein	NA	NA	NA	NA
WP_164923091.1\|1400013_1400643_-	hypothetical protein	NA	NA	NA	NA
WP_011975469.1\|1400800_1401037_+	DUF2188 domain-containing protein	NA	NA	NA	NA
WP_164923092.1\|1401167_1401638_+	hypothetical protein	NA	NA	NA	NA
WP_011975470.1\|1401716_1402007_-	hypothetical protein	NA	NA	NA	NA
WP_011975471.1\|1402003_1402408_-	hypothetical protein	A0A1X9HVL7	Ruegeria_phage	5.3e-19	41.3
WP_011975472.1\|1402404_1403328_-	glycoside hydrolase family protein	NA	NA	NA	NA
WP_164923093.1\|1403500_1404370_-	hypothetical protein	NA	NA	NA	NA
WP_011975475.1\|1407084_1409193_-	hypothetical protein	B4UTR1	Rhizobium_phage	0.0e+00	86.9
WP_164923107.1\|1409193_1409607_-	hypothetical protein	B4UTR0	Rhizobium_phage	1.3e-52	73.6
WP_164923094.1\|1409761_1410268_+	hypothetical protein	S5MMK8	Bacillus_phage	8.5e-14	40.5
WP_011975479.1\|1410719_1410899_-	hypothetical protein	B4UTQ8	Rhizobium_phage	3.2e-16	81.2
WP_011975480.1\|1410908_1411613_-	hypothetical protein	B4UTQ7	Rhizobium_phage	1.9e-125	93.2
WP_011975481.1\|1411609_1413892_-	tape measure protein	B4UTQ6	Rhizobium_phage	2.3e-50	59.4
WP_164923095.1\|1413935_1414256_+	hypothetical protein	NA	NA	NA	NA
WP_164923079.1\|1414252_1414411_-	hypothetical protein	NA	NA	NA	NA
WP_011975483.1\|1414467_1414824_-	gene transfer agent family protein	B4UTQ4	Rhizobium_phage	2.1e-11	40.9
WP_011975484.1\|1414823_1415261_-	hypothetical protein	NA	NA	NA	NA
WP_011975485.1\|1415301_1415718_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_011975486.1\|1415717_1416200_-	HK97 gp10 family phage protein	A0A141GEW6	Brucella_phage	5.8e-20	42.6
WP_011975487.1\|1416196_1416547_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_011975488.1\|1416697_1417108_-	hypothetical protein	B4UTP8	Rhizobium_phage	5.4e-35	61.9
WP_164923096.1\|1417109_1417391_-	hypothetical protein	NA	NA	NA	NA
WP_011975490.1\|1417412_1418750_-	hypothetical protein	A0A0F6SJ03	Sinorhizobium_phage	8.7e-34	44.3
WP_011975491.1\|1418753_1419116_-	hypothetical protein	NA	NA	NA	NA
WP_011975492.1\|1419134_1419707_-\|head,tail	phage gp6-like head-tail connector protein	A0A286S294	Klebsiella_phage	4.3e-06	44.6
WP_011975493.1\|1419922_1420312_-	hypothetical protein	A0A142K633	Streptomyces_phage	6.5e-14	41.1
WP_011975494.1\|1420374_1421649_-\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	1.2e-51	39.3
WP_164923108.1\|1421694_1422399_-\|head,protease	HK97 family phage prohead protease	A0A2D1GNL2	Pseudomonas_phage	3.9e-25	38.6
WP_011975496.1\|1422412_1423666_-\|portal	phage portal protein	B0VK31	Azospirillum_phage	1.3e-95	43.9
WP_164923109.1\|1423683_1425267_-\|terminase	terminase large subunit	K7P7T5	Enterobacteria_phage	3.4e-101	44.4

DBSCAN-SWA_3

1697548 : 1767762

Sinorhizobium_phage(70.73%)

protease,tail,tRNA,transposase,integrase,head,portal,terminase,capsid

attL 1712657:1712674|attR 1749558:1749575

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011974580.1\|1697548_1698481_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_024312153.1\|1698533_1698947_-	diacylglycerol kinase	NA	NA	NA	NA
WP_011975751.1\|1699082_1700099_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_011975752.1\|1700236_1701025_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_011975753.1\|1701070_1701292_+	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_011975754.1\|1701288_1701990_+\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA
WP_011975755.1\|1701997_1702759_-	ABC transporter permease	NA	NA	NA	NA
WP_011975756.1\|1702755_1703682_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	9.7e-24	34.7
WP_011975757.1\|1703854_1704187_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011975758.1\|1704196_1705087_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_033043220.1\|1705250_1706405_-	extensin family protein	NA	NA	NA	NA
WP_011975760.1\|1706705_1707257_-	membrane protein	NA	NA	NA	NA
WP_011975761.1\|1707482_1709294_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	9.8e-12	50.5
WP_011975762.1\|1709503_1709893_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_011975763.1\|1709904_1710495_+	hypothetical protein	NA	NA	NA	NA
WP_011975764.1\|1710532_1710886_-	DMT family protein	NA	NA	NA	NA
WP_011975765.1\|1711061_1713998_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
1712657:1712674	attL	NA	NA	NA	NA
WP_011975766.1\|1714213_1714861_+	membrane protein	NA	NA	NA	NA
WP_033051278.1\|1714948_1715536_-	J domain-containing protein	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	6.6e-10	48.3
WP_003535347.1\|1716065_1716278_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	5.6e-12	54.5
WP_011975768.1\|1716357_1717515_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_011975769.1\|1717607_1718693_+\|integrase	site-specific integrase	I6NSG1	Burkholderia_phage	9.1e-114	58.2
WP_011975770.1\|1719115_1720348_-	hypothetical protein	NA	NA	NA	NA
WP_167313272.1\|1721370_1721541_+	hypothetical protein	NA	NA	NA	NA
WP_011975773.1\|1721976_1722486_-	nucleoside kinase	NA	NA	NA	NA
WP_162304779.1\|1723188_1723803_-	S8 family serine peptidase	NA	NA	NA	NA
WP_011975775.1\|1724201_1724864_-	hypothetical protein	NA	NA	NA	NA
WP_011975776.1\|1725868_1726573_+	thiol reductase thioredoxin	NA	NA	NA	NA
WP_011975777.1\|1727567_1728284_+	necrosis-inducing protein	NA	NA	NA	NA
WP_011975778.1\|1728564_1728891_-	hypothetical protein	A0A291AUN9	Sinorhizobium_phage	3.2e-46	84.0
WP_011975779.1\|1729257_1730073_-	membrane protein	NA	NA	NA	NA
WP_011975780.1\|1730334_1730673_-	hypothetical protein	A0A291AUN7	Sinorhizobium_phage	4.9e-26	69.7
WP_011975781.1\|1730659_1731007_-	hypothetical protein	A0A2H4J9Z7	uncultured_Caudovirales_phage	5.8e-22	48.2
WP_011975782.1\|1731006_1732131_-	hypothetical protein	A0A291AUN5	Sinorhizobium_phage	1.5e-31	55.8
WP_011975783.1\|1732142_1733657_-	hypothetical protein	A0A2D2W219	Sinorhizobium_phage	1.4e-266	88.2
WP_011975784.1\|1733656_1736314_-	DUF1983 domain-containing protein	A0A291AUN1	Sinorhizobium_phage	2.6e-263	64.7
WP_011975785.1\|1736320_1736725_-	hypothetical protein	A0A291AUN0	Sinorhizobium_phage	6.5e-49	73.9
WP_164923110.1\|1737214_1738156_+\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_011975787.1\|1738417_1739008_-	DUF2163 domain-containing protein	A0A291AUM8	Sinorhizobium_phage	1.2e-75	72.1
WP_011975788.1\|1739004_1739655_-	hypothetical protein	A0A291AUM9	Sinorhizobium_phage	2.8e-78	69.6
WP_011975789.1\|1739654_1741526_-	hypothetical protein	A0A291AUM6	Sinorhizobium_phage	9.9e-177	57.5
WP_018208952.1\|1741619_1741784_+	hypothetical protein	NA	NA	NA	NA
WP_018208953.1\|1741799_1741991_-	hypothetical protein	A0A291AUN4	Sinorhizobium_phage	1.9e-19	74.2
WP_011975791.1\|1742059_1742440_-	hypothetical protein	A0A291AUM7	Sinorhizobium_phage	2.8e-46	77.2
WP_011975792.1\|1742452_1742863_-\|tail	tail protein	A0A291AUM5	Sinorhizobium_phage	3.7e-52	76.5
WP_011975793.1\|1742956_1743421_-	hypothetical protein	A0A291AUM4	Sinorhizobium_phage	4.6e-51	66.9
WP_011975794.1\|1743422_1743719_-	hypothetical protein	A0A291AUM3	Sinorhizobium_phage	1.5e-26	62.9
WP_011975795.1\|1743721_1744048_-	hypothetical protein	A0A291AUL9	Sinorhizobium_phage	7.3e-35	70.8
WP_011975796.1\|1744044_1744449_-	hypothetical protein	NA	NA	NA	NA
WP_011975797.1\|1744523_1745555_-\|capsid	major capsid protein	A0A291AUL7	Sinorhizobium_phage	9.3e-177	85.9
WP_011975798.1\|1745582_1745939_-\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	2.6e-46	83.9
WP_011975799.1\|1745941_1746484_-	hypothetical protein	A0A291AUL6	Sinorhizobium_phage	1.4e-38	77.5
WP_011975800.1\|1746509_1747415_-	S49 family peptidase	A0A291AUM2	Sinorhizobium_phage	3.7e-145	86.1
WP_011975801.1\|1747411_1749136_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	7.5e-288	83.5
WP_011975802.1\|1749132_1749369_-	hypothetical protein	A0A291AUL5	Sinorhizobium_phage	5.8e-26	79.5
WP_011975803.1\|1749379_1751422_-\|terminase	terminase	A0A291AUK9	Sinorhizobium_phage	0.0e+00	89.4
1749558:1749575	attR	NA	NA	NA	NA
WP_011975804.1\|1751418_1752060_-	hypothetical protein	A0A291AUL0	Sinorhizobium_phage	2.8e-54	58.9
WP_011975805.1\|1752209_1752956_-	hypothetical protein	A0A291AUL1	Sinorhizobium_phage	2.5e-115	84.3
WP_011975806.1\|1753184_1753844_-	antitermination factor NusG	NA	NA	NA	NA
WP_011975807.1\|1753827_1755081_-	hypothetical protein	A0A291AUS5	Sinorhizobium_phage	1.8e-153	71.3
WP_011975808.1\|1755191_1755440_+	DUF982 domain-containing protein	NA	NA	NA	NA
WP_011975809.1\|1755445_1755751_-	hypothetical protein	A0A291AUK8	Sinorhizobium_phage	7.3e-21	55.0
WP_011975810.1\|1755747_1757271_-	S-adenosylmethionine-binding protein	A0A2I7QIB9	Vibrio_phage	9.7e-13	27.7
WP_011975811.1\|1757267_1757474_-	hypothetical protein	NA	NA	NA	NA
WP_011975812.1\|1757470_1757719_-	hypothetical protein	NA	NA	NA	NA
WP_011975813.1\|1757718_1757940_-	hypothetical protein	NA	NA	NA	NA
WP_011975814.1\|1757939_1758395_-	hypothetical protein	NA	NA	NA	NA
WP_011975815.1\|1758614_1758866_-	hypothetical protein	R9TNB3	Rhizobium_phage	8.7e-12	52.0
WP_011975816.1\|1758954_1759656_+	LexA family transcriptional regulator	R9TRS6	Rhizobium_phage	7.3e-56	47.6
WP_014526901.1\|1759875_1760061_+	hypothetical protein	NA	NA	NA	NA
WP_011975818.1\|1760183_1760357_+	hypothetical protein	NA	NA	NA	NA
WP_018208236.1\|1760716_1760899_+	hypothetical protein	A0A291AUC9	Sinorhizobium_phage	2.6e-10	56.4
WP_011975820.1\|1760895_1761267_+	DUF4326 domain-containing protein	A0A0A8IN79	Aurantimonas_phage	1.3e-19	47.0
WP_011975821.1\|1761266_1761806_+	hypothetical protein	A0A291AUJ2	Sinorhizobium_phage	2.7e-26	45.2
WP_011975822.1\|1761802_1762168_+	HNH endonuclease	A0A291AUJ4	Sinorhizobium_phage	4.6e-46	68.9
WP_011975823.1\|1762170_1762464_+	hypothetical protein	I6NSR8	Burkholderia_phage	2.6e-23	62.4
WP_011975824.1\|1762666_1763488_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_011975826.1\|1764393_1767762_+	AAA family ATPase	A0A218MLZ2	uncultured_virus	2.2e-09	32.4

DBSCAN-SWA_4

1893864 : 1904650

Sinorhizobium_phage(33.33%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_164923111.1\|1893864_1894554_+	mannosyltransferase	A0A0U3TLF2	Cucumis_melo_alphaendornavirus	1.9e-08	29.9
WP_011975951.1\|1894542_1895058_-	hypothetical protein	A0A1Y0SVH3	Sinorhizobium_phage	8.2e-49	57.6
WP_162303353.1\|1895058_1896474_-	hypothetical protein	A0A1Y0SVH2	Sinorhizobium_phage	4.7e-38	42.7
WP_011975953.1\|1896638_1897745_-	hypothetical protein	A0A076G7H2	Sinorhizobium_phage	6.8e-24	50.8
WP_011975954.1\|1897744_1898098_-	hypothetical protein	NA	NA	NA	NA
WP_011975955.1\|1898094_1899693_-\|tail	tail fiber domain-containing protein	A0A088FAP6	Sulfitobacter_phage	6.6e-20	33.6
WP_011975956.1\|1899696_1900158_-	hypothetical protein	NA	NA	NA	NA
WP_011975957.1\|1900157_1901774_-	hypothetical protein	A0A088F6U1	Sulfitobacter_phage	1.2e-80	38.2
WP_011975958.1\|1901770_1902373_-	hypothetical protein	A0A088FAT4	Sulfitobacter_phage	1.3e-16	32.8
WP_011975959.1\|1902369_1903731_-	hypothetical protein	NA	NA	NA	NA
WP_011975960.1\|1903727_1904330_-	hypothetical protein	A0A2K9VHC9	Pseudomonas_phage	1.8e-10	26.1
WP_011975961.1\|1904326_1904650_-	hypothetical protein	F8TUS1	EBPR_podovirus	1.4e-25	50.0

DBSCAN-SWA_5

1939189 : 1964243

Sinorhizobium_phage(57.14%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011975998.1\|1939189_1939555_-	hypothetical protein	A0A076GD39	Sinorhizobium_phage	9.6e-44	73.3
WP_011975999.1\|1939780_1940044_-	hypothetical protein	A0A076G8H8	Sinorhizobium_phage	8.8e-23	60.9
WP_011976000.1\|1940043_1941012_-	chitinase	A0A076G6J8	Sinorhizobium_phage	2.2e-164	87.0
WP_011976002.1\|1941626_1941818_+	hypothetical protein	NA	NA	NA	NA
WP_011976003.1\|1942097_1942451_-	hypothetical protein	A0A291AUN7	Sinorhizobium_phage	2.1e-27	71.9
WP_011976004.1\|1942437_1942785_-	hypothetical protein	A0A2H4J9Z7	uncultured_Caudovirales_phage	2.0e-22	49.1
WP_011976005.1\|1942784_1943909_-	hypothetical protein	A0A291AUN5	Sinorhizobium_phage	8.1e-33	56.5
WP_011976006.1\|1943920_1945435_-	hypothetical protein	A0A2D2W219	Sinorhizobium_phage	1.4e-266	88.2
WP_011976007.1\|1945434_1948092_-\|tail	phage tail protein	A0A291AUN1	Sinorhizobium_phage	1.5e-263	64.3
WP_011976008.1\|1948098_1948503_-	hypothetical protein	A0A291AUN0	Sinorhizobium_phage	3.5e-47	73.1
WP_011976009.1\|1948571_1948844_+	hypothetical protein	NA	NA	NA	NA
WP_011976010.1\|1948990_1949581_-	hypothetical protein	A0A291AUM8	Sinorhizobium_phage	3.2e-73	68.5
WP_011976011.1\|1949577_1950231_-	hypothetical protein	A0A291AUM9	Sinorhizobium_phage	2.0e-55	55.0
WP_024312133.1\|1950294_1950687_+	hypothetical protein	NA	NA	NA	NA
WP_011976013.1\|1950683_1952780_-	hypothetical protein	A0A076G7H2	Sinorhizobium_phage	2.4e-17	64.4
WP_011976014.1\|1952801_1953236_+	hypothetical protein	NA	NA	NA	NA
WP_050574891.1\|1953322_1953580_-	hypothetical protein	NA	NA	NA	NA
WP_011976016.1\|1953654_1954056_-	hypothetical protein	NA	NA	NA	NA
WP_011976017.1\|1954070_1954556_-	hypothetical protein	A0A2D1GNF2	Pseudomonas_phage	2.4e-10	30.9
WP_011976018.1\|1954557_1954983_-	hypothetical protein	NA	NA	NA	NA
WP_011976019.1\|1955189_1955636_-	hypothetical protein	W6E8K5	Rhizobium_phage	2.0e-14	41.0
WP_011976020.1\|1955635_1956673_-	hypothetical protein	W6EC05	Rhizobium_phage	1.8e-58	37.0
WP_011976021.1\|1956973_1957339_-	hypothetical protein	A0A076G8G5	Sinorhizobium_phage	8.2e-43	71.7
WP_011976022.1\|1957418_1957580_+	hypothetical protein	NA	NA	NA	NA
WP_011976023.1\|1957589_1958084_-	hypothetical protein	A0A059VG19	Pseudomonas_phage	2.5e-18	42.8
WP_011976024.1\|1958114_1958570_-	hypothetical protein	NA	NA	NA	NA
WP_011976025.1\|1958583_1959537_-	DUF2184 domain-containing protein	L7TMZ5	Rhizobium_phage	9.5e-75	50.2
WP_011976026.1\|1959551_1959989_-	DUF2190 family protein	NA	NA	NA	NA
WP_011976027.1\|1959988_1961131_-	DUF2213 domain-containing protein	A0A2R3UA67	Siphoviridae_environmental_samples	2.5e-77	48.2
WP_011976028.1\|1961526_1962903_-	DUF1073 domain-containing protein	L7TRA1	Rhizobium_phage	4.8e-128	51.1
WP_011976029.1\|1962911_1964243_-	DNA-packaging protein	Q1WDG8	Streptomyces_phage	2.9e-37	31.1

DBSCAN-SWA_6

1968905 : 1975880

Sinorhizobium_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011976037.1\|1968905_1969523_-	hypothetical protein	A0A076G6H3	Sinorhizobium_phage	4.2e-31	39.8
WP_011976038.1\|1969519_1969954_-	GcrA cell cycle regulator	NA	NA	NA	NA
WP_024312129.1\|1969950_1970487_-	hypothetical protein	NA	NA	NA	NA
WP_024312128.1\|1970536_1970932_-	hypothetical protein	M9Q2G6	Clostridium_phage	8.3e-09	41.9
WP_011976041.1\|1971288_1971669_-	DUF1064 domain-containing protein	A0A0R6PIZ9	Moraxella_phage	5.9e-12	36.7
WP_011976042.1\|1971665_1971866_-	hypothetical protein	A0A076G6Y4	Sinorhizobium_phage	2.1e-21	74.6
WP_011976043.1\|1971862_1972129_-	hypothetical protein	NA	NA	NA	NA
WP_011976044.1\|1972125_1972773_-	hypothetical protein	A0A076GD02	Sinorhizobium_phage	4.3e-95	79.3
WP_011976045.1\|1972865_1973111_+	DUF982 domain-containing protein	NA	NA	NA	NA
WP_011976046.1\|1973113_1973296_-	hypothetical protein	NA	NA	NA	NA
WP_011976047.1\|1973292_1974060_-	hypothetical protein	A0A291AUT5	Sinorhizobium_phage	3.7e-85	67.5
WP_024312126.1\|1974056_1974410_-	hypothetical protein	A0A076G6G6	Sinorhizobium_phage	1.3e-42	79.5
WP_018010769.1\|1974504_1974756_+	hypothetical protein	NA	NA	NA	NA
WP_011976049.1\|1975070_1975880_-	DUF2312 domain-containing protein	A0A0F6R615	Sinorhizobium_phage	9.1e-10	50.7

DBSCAN-SWA_7

2299715 : 2309314

Vibrio_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011976352.1\|2299715_2301770_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-35	33.6
WP_162142224.1\|2301859_2302108_-	hypothetical protein	NA	NA	NA	NA
WP_011976353.1\|2302217_2303252_-	L-threonine 3-dehydrogenase	R9TPW0	Vibrio_phage	5.0e-13	64.7
WP_011976354.1\|2303292_2304480_-	glycine C-acetyltransferase	D2TEZ5	Emiliania_huxleyi_virus	1.1e-35	27.6
WP_024324107.1\|2304701_2306552_-	DNA helicase RecQ	A0A1V0SBK0	Catovirus	4.0e-77	35.4
WP_011976356.1\|2306654_2308670_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	6.2e-92	42.6
WP_011976357.1\|2308864_2309314_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	4.0e-15	38.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_009620

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

816885 : 825679

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012061258.1\|816885_818166_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.8e-74	42.7
WP_012061259.1\|818169_818946_-	hydroxypyruvate isomerase family protein	NA	NA	NA	NA
WP_012061260.1\|818957_819878_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	6.8e-70	49.0
WP_012061261.1\|820011_821016_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	7.1e-12	25.5
WP_012061262.1\|821031_821709_+	aldolase	A0A077SK32	Escherichia_phage	7.5e-50	49.8
WP_012061263.1\|821949_822732_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_012061264.1\|822766_823750_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_012061265.1\|823751_824528_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	5.3e-07	27.8
WP_012061266.1\|824611_825679_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G3M9Y6	Bacillus_virus	3.5e-25	33.0

DBSCAN-SWA_2

1327358 : 1334512

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012061733.1\|1327358_1328333_+	NAD-dependent epimerase/dehydratase family protein	A0A2H4UUK0	Bodo_saltans_virus	1.2e-40	35.1
WP_012061734.1\|1328329_1329523_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L470	Tupanvirus	3.0e-41	33.7
WP_012061735.1\|1329560_1331069_-	O-antigen translocase	NA	NA	NA	NA
WP_012061736.1\|1331074_1331995_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.6e-31	36.9
WP_012061737.1\|1331991_1333059_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.9e-93	51.2
WP_012061738.1\|1333055_1333637_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.2e-33	44.5
WP_012061739.1\|1333633_1334512_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-92	57.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NC_009621

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

975393 : 1136371

117

Paenibacillus_phage(12.9%)

transposase,integrase

attL 1028497:1028528|attR 1129918:1129949

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011970797.1\|975393_976340_-\|transposase	IS630-like element ISRm2011-2 family transposase	S5VXX4	Leptospira_phage	1.0e-12	24.7
WP_011970798.1\|976968_977415_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.0e-18	47.2
WP_018210666.1\|978190_979411_-	sulfite oxidase	NA	NA	NA	NA
WP_011970800.1\|979681_981034_-	two-component sensor histidine kinase	NA	NA	NA	NA
WP_011970801.1\|981023_981692_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.8e-24	30.3
WP_011970802.1\|981843_982068_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_011970803.1\|982933_984676_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_011970804.1\|984965_986168_-\|transposase	IS256-like element ISRm3 family transposase	A0A218MNI5	uncultured_virus	1.0e-41	43.3
WP_011970805.1\|986611_986878_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_011970806.1\|986881_987427_+	cytochrome b561	NA	NA	NA	NA
WP_011970807.1\|988034_988247_+	hypothetical protein	NA	NA	NA	NA
WP_018210669.1\|988214_988415_-	hypothetical protein	B4UTS3	Rhizobium_phage	2.9e-10	72.3
WP_018210670.1\|988492_988816_-	hypothetical protein	NA	NA	NA	NA
WP_011970808.1\|989618_991520_+	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	2.2e-67	30.4
WP_011970737.1\|993015_993696_-	flavin reductase family protein	NA	NA	NA	NA
WP_011970766.1\|995544_995835_-	hypothetical protein	NA	NA	NA	NA
WP_127615197.1\|998952_999069_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_024325697.1\|999065_999260_+	hypothetical protein	NA	NA	NA	NA
WP_011970812.1\|1000736_1001462_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011970813.1\|1002098_1002554_-	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.1e-17	47.5
WP_011970777.1\|1002865_1003111_+	hypothetical protein	NA	NA	NA	NA
WP_011970779.1\|1003561_1004980_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_011970781.1\|1005563_1006091_-	NUDIX hydrolase	A0A2H4IB87	Erwinia_phage	6.5e-09	34.2
WP_011970815.1\|1006606_1006810_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.2e-08	51.7
WP_011970816.1\|1007458_1007977_+	hypothetical protein	NA	NA	NA	NA
WP_011970817.1\|1008031_1008361_-	hypothetical protein	A0A291AUN9	Sinorhizobium_phage	6.2e-42	75.7
WP_011970819.1\|1009720_1009942_+	hypothetical protein	NA	NA	NA	NA
WP_011970821.1\|1010425_1010602_+	hypothetical protein	NA	NA	NA	NA
WP_011970822.1\|1010844_1011291_+	helix-turn-helix transcriptional regulator	A0A223W054	Agrobacterium_phage	4.2e-09	52.6
WP_081612529.1\|1011792_1012245_-	hypothetical protein	A0A1S5R1F8	Pseudomonas_phage	3.5e-19	38.0
WP_011970823.1\|1012474_1012765_-	hypothetical protein	NA	NA	NA	NA
WP_011970826.1\|1015251_1015503_+	acyl carrier protein	NA	NA	NA	NA
WP_011970827.1\|1016690_1016987_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	2.9e-22	59.8
WP_011970828.1\|1017062_1018700_+	chaperonin GroEL	A0A219YK78	uncultured_virus	6.7e-177	63.3
WP_024312629.1\|1022630_1023806_-	C1 family peptidase	NA	NA	NA	NA
WP_011970831.1\|1023922_1026844_+	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA
1028497:1028528	attL	NA	NA	NA	NA
WP_011970372.1\|1028825_1029389_-	UPF0149 family protein	NA	NA	NA	NA
WP_011970374.1\|1030311_1031571_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.2e-28	28.7
WP_011970376.1\|1032893_1033250_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_017274615.1\|1034184_1034805_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011970838.1\|1034825_1035968_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_024312633.1\|1035972_1036272_-	thiamine biosynthesis protein ThiS	NA	NA	NA	NA
WP_164821094.1\|1036288_1036837_-	hypothetical protein	NA	NA	NA	NA
WP_011970841.1\|1037144_1038107_-	hypothetical protein	NA	NA	NA	NA
WP_011970842.1\|1038166_1039384_-	YcaO-like family protein	NA	NA	NA	NA
WP_011970843.1\|1039380_1040751_-	hypothetical protein	NA	NA	NA	NA
WP_153414131.1\|1040750_1041872_-	hypothetical protein	NA	NA	NA	NA
WP_011970845.1\|1042011_1042245_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_011970846.1\|1042394_1042628_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_011970847.1\|1042936_1043170_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_011970846.1\|1043319_1043553_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_011969941.1\|1043880_1044826_+\|transposase	IS630-like element ISRm10 family transposase	A0A2P0VP61	Tetraselmis_virus	2.3e-12	23.3
WP_011970847.1\|1044912_1045146_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_101777239.1\|1046195_1046959_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	9.4e-25	42.5
WP_011970849.1\|1047441_1048218_+	hypothetical protein	NA	NA	NA	NA
WP_024312670.1\|1048377_1049106_+	hypothetical protein	NA	NA	NA	NA
WP_011970851.1\|1049870_1050131_+\|transposase	transposase	NA	NA	NA	NA
WP_164923146.1\|1050401_1050836_+\|transposase	transposase	NA	NA	NA	NA
WP_081612492.1\|1050832_1051744_+\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	5.4e-27	37.1
WP_011970855.1\|1053349_1053682_-	hypothetical protein	NA	NA	NA	NA
WP_011970856.1\|1053804_1055415_-	tyrosinase family protein	NA	NA	NA	NA
WP_011970857.1\|1055479_1055872_-	hypothetical protein	NA	NA	NA	NA
WP_011970858.1\|1055899_1057840_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_011970860.1\|1059356_1059776_+	helix-turn-helix transcriptional regulator	A0A1V0EEW3	Caulobacter_phage	1.4e-09	40.4
WP_101777239.1\|1060531_1061295_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	9.4e-25	42.5
WP_164923156.1\|1062589_1064209_+	EAL domain-containing protein	NA	NA	NA	NA
WP_164923157.1\|1064473_1065418_+	pectate lyase	A0A076FMJ8	Aureococcus_anophage	8.4e-15	32.0
WP_011970863.1\|1065774_1066524_+	carbonic anhydrase	NA	NA	NA	NA
WP_127578254.1\|1066624_1066831_-	hypothetical protein	NA	NA	NA	NA
WP_127575017.1\|1067100_1068525_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_011970865.1\|1068649_1069537_+	hypothetical protein	NA	NA	NA	NA
WP_024312635.1\|1070137_1071829_+	type IV secretion system ATPase VirD4	NA	NA	NA	NA
WP_011970867.1\|1072620_1073346_-	response regulator	W8CYM9	Bacillus_phage	8.1e-18	30.7
WP_024312637.1\|1073658_1073877_-	hypothetical protein	NA	NA	NA	NA
WP_011970871.1\|1077565_1078606_-	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA
WP_011970872.1\|1078645_1079764_-	type IV secretion system protein VirB10	NA	NA	NA	NA
WP_011970873.1\|1079760_1080642_-	P-type conjugative transfer protein VirB9	NA	NA	NA	NA
WP_011970874.1\|1080638_1081352_-	type IV secretion system protein VirB8	NA	NA	NA	NA
WP_011970875.1\|1081338_1081506_-	type IV secretion system lipoprotein VirB7	NA	NA	NA	NA
WP_011970876.1\|1081538_1082426_-	type IV secretion system protein	NA	NA	NA	NA
WP_011970877.1\|1082507_1083191_-	pilin minor subunit VirB5	NA	NA	NA	NA
WP_011970878.1\|1083204_1085574_-	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_011970879.1\|1085573_1085900_-	type IV secretion system protein VirB3	NA	NA	NA	NA
WP_011970880.1\|1085896_1086259_-	pilin major subunit VirB2	NA	NA	NA	NA
WP_011970881.1\|1086272_1086980_-	type IV secretion system lytic transglycosylase VirB1	NA	NA	NA	NA
WP_024325706.1\|1088196_1088814_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_024312685.1\|1088890_1089133_+	hypothetical protein	NA	NA	NA	NA
WP_011970739.1\|1089506_1090595_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_101777239.1\|1090630_1091394_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	9.4e-25	42.5
WP_101777239.1\|1091481_1092245_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	9.4e-25	42.5
WP_011970816.1\|1092996_1093515_+	hypothetical protein	NA	NA	NA	NA
WP_164923129.1\|1093784_1093994_+	hypothetical protein	NA	NA	NA	NA
WP_011970883.1\|1095834_1096131_+	hypothetical protein	NA	NA	NA	NA
WP_011970884.1\|1096823_1098650_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1HPF5	Paramecium_bursaria_Chlorella_virus	1.6e-110	40.3
WP_011970885.1\|1098733_1099837_+	nodulation protein NolF	NA	NA	NA	NA
WP_011970886.1\|1099840_1103038_+	nodulation protein NolG	S5VTK5	Leptospira_phage	5.1e-96	26.4
WP_011970887.1\|1103588_1104914_-	nitrogenase iron-molybdenum cofactor biosynthesis protein NifN	NA	NA	NA	NA
WP_024312567.1\|1105935_1106862_-	transcriptional regulator NodD1	NA	NA	NA	NA
WP_011970890.1\|1107125_1107716_+	nodulation N-acyltransferase NodA	NA	NA	NA	NA
WP_011970891.1\|1107712_1108366_+	chitooligosaccharide deacetylase NodB	NA	NA	NA	NA
WP_011970892.1\|1108380_1109661_+	chitooligosaccharide synthase NodC	M1GYM3	Paramecium_bursaria_Chlorella_virus	3.4e-11	26.6
WP_011970893.1\|1109668_1110736_+	nodulation factor ABC transporter ATP-binding protein NodI	W6JKT0	Anomala_cuprea_entomopoxvirus	3.1e-26	29.9
WP_011970894.1\|1110739_1111528_+	ABC transporter permease	NA	NA	NA	NA
WP_011970895.1\|1113108_1115010_-	bifunctional sulfate adenylyltransferase/adenylyl-sulfate kinase NodQ	A0A2K9L0F0	Tupanvirus	3.0e-27	45.5
WP_011970896.1\|1115009_1115909_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_011970897.1\|1116324_1117062_-	host-specificity nodulation protein HsnC	A0A0K0KVL6	Prochlorococcus_phage	3.1e-09	29.6
WP_018210180.1\|1117066_1117333_-	hypothetical protein	NA	NA	NA	NA
WP_011970898.1\|1117552_1118761_-	host-specificity nodulation protein HsnB	NA	NA	NA	NA
WP_011970899.1\|1118763_1119045_-	host-specificity nodulation protein HsnA	NA	NA	NA	NA
WP_164923130.1\|1119193_1119532_+	hypothetical protein	NA	NA	NA	NA
WP_011970900.1\|1119738_1120482_+	nodulation protein NodH	NA	NA	NA	NA
WP_011970901.1\|1121280_1121667_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_018210181.1\|1121663_1122008_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_011970904.1\|1124661_1125585_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_011970905.1\|1126437_1127418_-	nod/exo genes transcriptional regulator SyrM	NA	NA	NA	NA
WP_024312554.1\|1132986_1133928_+	transcriptional regulator NodD3	NA	NA	NA	NA
1129918:1129949	attR	NA	NA	NA	NA
WP_011970910.1\|1135225_1136371_-\|transposase	IS110 family transposase	A0A1X9I5Z0	Streptococcus_phage	1.5e-05	24.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NC_009622

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

77570 : 109065

Staphylococcus_prophage(25.0%)

transposase,integrase

attL 101527:101586|attR 174062:174124

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011971073.1\|77570_78572_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.7e-42	34.7
WP_011971072.1\|78911_79649_+	hypothetical protein	NA	NA	NA	NA
WP_011971071.1\|79635_81045_-\|transposase	ISNCY family transposase	Q4VFZ2	Porcine_endogenous_retrovirus	1.1e-05	27.7
WP_011971069.1\|83689_84022_-	hypothetical protein	NA	NA	NA	NA
WP_011971068.1\|84144_85755_-	tyrosinase family protein	NA	NA	NA	NA
WP_011971067.1\|85818_86211_-	hypothetical protein	NA	NA	NA	NA
WP_011971066.1\|86238_88188_-	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_164830353.1\|88943_89099_-	hypothetical protein	NA	NA	NA	NA
WP_011971065.1\|91436_92630_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_011971064.1\|92634_93789_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_011971063.1\|93805_94582_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-32	40.1
WP_011971061.1\|95959_96244_+	hypothetical protein	NA	NA	NA	NA
WP_011971060.1\|96363_96504_+	hypothetical protein	NA	NA	NA	NA
WP_011971059.1\|96911_98021_+	ionic transporter y4hA	NA	NA	NA	NA
WP_011971058.1\|98084_98309_-	hypothetical protein	NA	NA	NA	NA
WP_086017937.1\|98377_98635_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_017266772.1\|98634_98895_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_011971054.1\|100151_101174_+\|transposase	IS110 family transposase	NA	NA	NA	NA
101527:101586	attL	NA	NA	NA	NA
WP_011971052.1\|103877_104897_-	1-aminocyclopropane-1-carboxylate deaminase	NA	NA	NA	NA
WP_011971051.1\|105040_105517_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_162142262.1\|106273_106837_+\|transposase	transposase	NA	NA	NA	NA
WP_011971049.1\|106897_108136_+\|integrase	site-specific integrase	A0A1B1P7C7	Bacillus_phage	7.1e-06	31.0
WP_011971048.1\|108132_109065_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
174062:174124	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_009636

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_009620

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NC_009621

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NC_009622

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection