CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_009795	Campylobacter concisus 13826 plasmid pCCON31, complete sequence	3 crisprs	NA	0	3	0	0
NC_009802	Campylobacter concisus 13826, complete genome	1 crisprs	DEDDh,cas6,cas8b1,cas7,cas5,cas3,cas4,cas2,cas1	0	2	0	0
NC_009796	Campylobacter concisus 13826 plasmid pCCON16, complete sequence	0 crisprs	NA	0	0	0	0

1. NC_009795

CRISPR-Cas detection and classification

Crispr_ID: NC_009795_1

• CRISPR_ID: NC_009795_1
• CRISPR_location: 7181-7269
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009795_1

Consensus_repeat	Method
ACTCTGGCAGTGATATAAATTTAAA	CRISPRCasFinder

spacers of NC_009795_1

>1.1|7206|38|NC_009795|CRISPRCasFinder
TGCTAAAAACACTCTTGTAGTCTCATCATCACATCTAA

CRISPR arrays and Neighbor proteins around NC_009795_1

CRISPR arrays

The CRISPR arrays of NC_009795_1

>merge|NC_009795|1|7181-7269|CRISPRCasFinder
ACGCTAATAGCGACATAAATTTAAATGCTAAAAACACTCTTGTAGTCTCATCATCACATCTAAACTCGCTAAAAGATATAAATTTAAAA

>NC_009795|1|1|7181-7269|CRISPRCasFinder
ACGCTAATAGCGACATAAATTTAAA	TGCTAAAAACACTCTTGTAGTCTCATCATCACATCTAA
ACTCGCTAAAAGATATAAATTTAAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009795.1|WP_012000847.1|13583_13859_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000846.1|12789_13164_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000864.1|0_1293_+|Cpp22	unknown	unknown	gnl|CDD|226990
NC_009795.1|WP_012000850.1|15546_18306_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl|CDD|225387
NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein	unknown	unknown	gnl|CDD|226868
NC_009795.1|WP_012000876.1|9806_10121_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|349760
NC_009795.1|WP_012000859.1|2279_2501_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_155759023.1|12117_12291_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000878.1|11436_12048_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000875.1|12290_12734_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000871.1|10510_11440_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein	unknown	unknown	gnl|CDD|197339

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl|CDD|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.40205e-96
NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein	gnl|CDD|197339	cd10312, Deadenylase_CCR4b, C-terminal deadenylase domain of CCR4b, also known as CCR4-NOT transcription complex subunit 6-like. This subfamily contains the C-terminal catalytic domain of the deadenylase, CCR4b, also known as CCR4-NOT transcription complex subunit 6-like (CNOT6L). CCR4 belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. CCR4 is the major deadenylase subunit of the CCR4-NOT transcription complex, which contains two deadenylase subunits and several noncatalytic subunits. The other deadenylase subunit, Caf1, is a DEDD-type protein and does not belong in this superfamily. There are two vertebrate CCR4 proteins, CCR4a (also called CCR4-NOT transcription complex subunit 6 or CNOT6) and CCR4b. CCR4b associates with other components, such as CNOT1-3 and Caf1, to form a CCR4-NOT multisubunit complex, which regulates transcription and mRNA degradation. The nuclease domain of CCR4b exhibits Mg2+-dependent deadenylase activity with strict specificity for poly (A) RNA as substrate. CCR4b is mainly localized in the cytoplasm. It regulates cell growth and influences cell cycle progression by regulating p27/Kip1 mRNA levels. It contributes to the prevention of cell death by regulating insulin-like growth factor-binding protein 5.	0.00368005
NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein	gnl|CDD|226868	COG4461, LprI, Uncharacterized protein conserved in bacteria, putative lipoprotein [Function unknown].	1.05785e-12
NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase	gnl|CDD|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.93658e-35
NC_009795.1|WP_012000864.1|0_1293_+|Cpp22	gnl|CDD|226990	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown].	7.68145e-25

Protein sequences

>NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRTLLSLSMVCAALLANETNLKNELNNEEIRANMASSFNESSNINLLNEKPTSEGKLNLNETPCFKIDKISLLSENEVASFNASSGADEAIIREAYNANYSKFNSILEASLNKLDFKAGSCLGKNSINLIINSFNNEIIKSGYITSSASLFTKSLKDAKLEFVINLGLIDDISINEVDNQRNRASLFSAFGEYSHKNKVANIRDIEQALESLQNVSKNDVSIKFLPSNRAGFSNIVITRVDSFPLKAAISIDNLGSKQSGKYQGMVNLSTLNLLGFNEIFSFSRGKDIFKKYEVTNKFNGATDHGASNNYYYGFTIPFGYFMLEYEKSKYDYAQIINAAYNLYTYKGRSESDSLNLAYTFYRDSNFKNSAYVKLFKRKNKNYLEDYELDNQARRNAGYEVGVKSSWSSYNQAFSAKLAYKKGTGIFRSQPDPLEDSGEATSRFALINLNLNYKYKFELPLSYDLNINARYGLNKLSLQDRFSIGGYHSVRGFDGESSLVGNHGVSVRNTLSYNYYKSNSVYAGLDAGMVRAANSGIKDKNTLAGYAIGLRGSIKAYNNLSYDISVSKPLYKPKSFESKSTNVNFIISYEF
>NC_009795.1|WP_012000859.1|2279_2501_+|hypothetical-protein
MGFKKVNTTPATSEENFINQARGETSEAKKPKNLKRDKSFLLYFTQDEFERVKIEAEKIGMGVNQYIRFKIFS
>NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase
MVISIVNEKGGSGKTTLAVNLAARLSEDGDNVLLIDADPQRSTEVFSDIRSQSNLKPLFSSVSKTGVSLGDEIKRMRANFDSIVVDTGGRDSKEMRKAMLSSNVLIIPTIPSQYDVSVLDRMLDLSSEAKELNEKLLTLILVNRVSPNPFLAKELESMREYIDDAKKERNLSDVFLLNSVIYERQAYRKTVSNGNSLSEFCKNGDRALEDFESFYAELLQVVKENIKD
>NC_009795.1|WP_012000864.1|0_1293_+|Cpp22
MPRKRKKIYIDVPYSLKNTAKTMGAMWDSDEKRWFIYDTFDFEALVKLLEENKKEGASKKIVLSDGITKFKVPYSQKYQIDITDVSLKFKAALNAAGLEVDTPIMDGILRRVRVDGDKGAQKSGAYVGYLDGTPAGFIQNFKSGFSSNWKYETLDILPYSGELIYSKKTQNLSNDNTVFIQKQLQRENELEDEYKKTARILLDEFLAANFAALDHAYFIRKRIYKNYGLKQDRFGNLLMPLFDINEKFWSLQRIFPNGNKMIGALLSNEQKKNGEKLLAKKRGNFFIISDDMDLYNKNSAKLNIEALLKYNKIYICEGFATAASVHEACKTPVIVGLDVGNLEFVVQNFFARFCNTHIIIAADNDVKKEKDSGFNIGKEKAMQIKNNFKNVSVCIPNFNDTEISSGYSDFNDLYNSRGIDEVGRQLEILL
>NC_009795.1|WP_012000876.1|9806_10121_+|hypothetical-protein
MKFRNFILFIITLIGCSGCYIGEPSYEVFKETLKANIGNPNILLAQNNKRVYSEDRYIYEFERPKGCRYGYLTNKDDKPERVLGWVILSGKEFCKERRAWALSF
>NC_009795.1|WP_012000871.1|10510_11440_+|hypothetical-protein
MSLTDKSFNETYRQSLSSNDLYNIELAINFIKQSSFYNTSLDNTNAFNPDKKQYEDRYIYLDSFTNNREFYDKNLKVDTKLSNDIANFATGFAKGGINLVKDTITGVYYLVSNPKEFVNALANIPNIPSEIKEGIDKGNLDVVLGDYESVTARDLEFIAGLTGPSAITNKAVKAAWDRFGKKSSGVTSDVTKIDNPAIEVVKDKDSAANVALYEKYKKELSNLEISSLFNKDGTLTKEAILKREQIIAGDNLGNIELIKELTKDGSNIKDWAKFKIDANKAEIHFYYNEKNNRAYYDMDYKTKFKVGKK
>NC_009795.1|WP_012000878.1|11436_12048_+|hypothetical-protein
MKVRLKAGVDNRLCPIVKCFDEKFNKYLRPSILYEIVQINVKDIQNKCSCTYMIISNDNKYGAYFSADLFDIVDDKIDNDWTIRHNNSEIIMAPRVINYQDFWNNYVDGCLKEEKIYCERFSHIVQNQFLKKWFRKIFNDYQDPSIKAIGVDTQEDGYVVCPHCYNAEQASAELGVIKCEKCNQEYNNPLAKICPSGIEVVDE
>NC_009795.1|WP_155759023.1|12117_12291_+|hypothetical-protein
MDTWNLQGVKHLKDILNSNIEFKKVTNSKDIAFLEKRLPDGRGVRLELNGKFKGFID
>NC_009795.1|WP_012000875.1|12290_12734_+|hypothetical-protein
MEILELLLDKVKLENCLNLTKVLIENSEEILNVNSTIYSNLSKENYKNFRFDETQNGYIYFQLKNSKIFDLKFEFFELYILIYNNENELTLSFDFNEVNKISLQNFIDFCKKMANALNTKFYYCGLEPAQDTSTQFFTYNGVGKINW
>NC_009795.1|WP_012000846.1|12789_13164_+|hypothetical-protein
MRKIRELLAKSLFRLASTDYQTQYIDNSTIYEYVVPEDLIEEVANFCREAQLDCFKNNFSERELEFANILRNKILNLPNGDIYGTNIWAELKIDAEKFLNILGYQIKDFDYSTIDNIDRNELGK
>NC_009795.1|WP_012000847.1|13583_13859_+|hypothetical-protein
MRELYKIYLKDNAQLGQTPKTIHYSGSTLLPKPFALSIVKYSDNEGYYLLYLDKFGEEQTDTYHETLEDAFGQAEFEFGVKKDEWFLVKNQ
>NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein
MNKKLKIVLQTEFACDSVFWIYDEFGENINGGTWVEQEDEISWDSKLPDELLSCPDIKRLSMEIMKEYNSLFINNEKEFSYKGFASPKSEAKYMQKINELRKILYEKCGDKYEIVGDLR
>NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein
MINKSHKRYNNKTLLSQKGILMKNLKLIFISTLLITSNLYSNDRIQPSFDCSKAKTRVEKLVCSDEDLSRVDRDMQKAYDLMMGKYDLAYMNEEAKEEIKPYLEKLKQSQIDWVKYRDKRCNAEKDEKEFRSCVFSRYINRIQSIVPSYNWRIGFSINDKNSTNDLCYNYFTQKFWMDSPKPVNKDNPPYGEDKEFYEKFLIDALDEDVAKRELNTTTNYYYTKLDFAPVGSFIMCVGIGGEEKDIYDLRSKTYKPYCTKSGIQFSDFLDGDYIGPGQKPVSGLKFKEVEETKEEFKKRGLDYKKYDIFSTEVYKKTIKNDTGGFRNEIYSTDKSYDANILSDGMVRILYASNLEWDKSEEKLGRYTHPDGYSSSPTSIVADKFFFRVFTGKHANNLICRMPIQSRFKDRNDTKLIREYLDQFKEF
>NC_009795.1|WP_012000850.1|15546_18306_+|hypothetical-protein
MPINERNASDFKNKLRDTLKDAEGFKYYLYYDTNKIATIGCGFNVTLKDILQKVCDEIYSKPKMDEKEFAGLLNTIKGVEIKTDDNLRSKVSDYLDSIKTEDKKSAKFGKFELNDKQIGDILPEVVEMFRDGLNKKLAYTSISPQESKIDENTIGSNEYIALMSMTYNNPSLVGNGLKAHLRARNRFGAWYEIRYKSNGDNEIGIAKRRFIESNEFGLFESNENNNAVEENRLTNISINAISFEECLDLFSLLNVAKIKDKDEPSVTYLQNAIAYETIKEFKGNKTIAGYSKGNDDFNTHYRKYNTILQFFADKINALLKNVTNKSFKLEDIYVITTKGDNSHNISRINKLLKIRAENGEFKPEAKRDILLIYPTASALPVMPIQPKNTTFTIVLADNTSLDCSNLNPNGNSNESEIVLMNYKQDVRVPNKNSRDEEISFIKPSTNGETIIYKNANDIFISQDERYAFNNGNVITLNFFEKMSFNLLNFAKENSYSIRSDKASSMFDIKLRLPDATDSISTKNEGNFNIVVTNLIIEDEEGKSCDIKEVYLHNGEDKRVYPSYYLKKNDDKDADSNSSSKNSYTAKFRININLDKNSSGYKKTSKFIIATFDLSKEYNTSEIHAKEDTAVVTLASKDKNNGGAEFNIKVSTVAYQKNITEIRLNTSESSDATNLSIKDTLNLEAVYLPNKGDDDYKEISWAYKVIREDEYNSEVRLDKPTGIVNLSEEKFKGKKITFTPKDDIKDKELLKTLNHGNHIIIFFAYLKSPEFSTKFGKTHIRVDMKAPIYLKYSNGKLCIYEFENTDNTMCFNTSFDKESKDKKVEHMPKGTYYISSNLSSGDIDIYEDDKLSAVCYQAIDGKDREPCKIYAINSNIQRVSSAKSGINLIDSENKNRFIQKFNEVKQRVGLDSKEVKLEVG

Crispr_ID: NC_009795_2

• CRISPR_ID: NC_009795_2
• CRISPR_location: 7403-7491
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009795_2

Consensus_repeat	Method
ACTCTGGCAGTGATATAAATTTAAA	CRISPRCasFinder

spacers of NC_009795_2

>2.1|7428|38|NC_009795|CRISPRCasFinder
CTCAGCTAACGATATCTATCTAGTATCATCTAAGCTAA

CRISPR arrays and Neighbor proteins around NC_009795_2

CRISPR arrays

The CRISPR arrays of NC_009795_2

>merge|NC_009795|2|7403-7491|CRISPRCasFinder
AATCAGGCAATAACATAAATTTAAACTCAGCTAACGATATCTATCTAGTATCATCTAAGCTAAAATCAGACAAAGATATAAATTTAAAC

>NC_009795|2|2|7403-7491|CRISPRCasFinder
AATCAGGCAATAACATAAATTTAAA	CTCAGCTAACGATATCTATCTAGTATCATCTAAGCTAA
AATCAGACAAAGATATAAATTTAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009795.1|WP_012000847.1|13583_13859_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000846.1|12789_13164_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000864.1|0_1293_+|Cpp22	unknown	unknown	gnl|CDD|226990
NC_009795.1|WP_012000850.1|15546_18306_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl|CDD|225387
NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein	unknown	unknown	gnl|CDD|226868
NC_009795.1|WP_012000876.1|9806_10121_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|349760
NC_009795.1|WP_012000859.1|2279_2501_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_155759023.1|12117_12291_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000878.1|11436_12048_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000875.1|12290_12734_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000871.1|10510_11440_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein	unknown	unknown	gnl|CDD|197339

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl|CDD|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.40205e-96
NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein	gnl|CDD|197339	cd10312, Deadenylase_CCR4b, C-terminal deadenylase domain of CCR4b, also known as CCR4-NOT transcription complex subunit 6-like. This subfamily contains the C-terminal catalytic domain of the deadenylase, CCR4b, also known as CCR4-NOT transcription complex subunit 6-like (CNOT6L). CCR4 belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. CCR4 is the major deadenylase subunit of the CCR4-NOT transcription complex, which contains two deadenylase subunits and several noncatalytic subunits. The other deadenylase subunit, Caf1, is a DEDD-type protein and does not belong in this superfamily. There are two vertebrate CCR4 proteins, CCR4a (also called CCR4-NOT transcription complex subunit 6 or CNOT6) and CCR4b. CCR4b associates with other components, such as CNOT1-3 and Caf1, to form a CCR4-NOT multisubunit complex, which regulates transcription and mRNA degradation. The nuclease domain of CCR4b exhibits Mg2+-dependent deadenylase activity with strict specificity for poly (A) RNA as substrate. CCR4b is mainly localized in the cytoplasm. It regulates cell growth and influences cell cycle progression by regulating p27/Kip1 mRNA levels. It contributes to the prevention of cell death by regulating insulin-like growth factor-binding protein 5.	0.00368005
NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein	gnl|CDD|226868	COG4461, LprI, Uncharacterized protein conserved in bacteria, putative lipoprotein [Function unknown].	1.05785e-12
NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase	gnl|CDD|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.93658e-35
NC_009795.1|WP_012000864.1|0_1293_+|Cpp22	gnl|CDD|226990	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown].	7.68145e-25

Protein sequences

>NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRTLLSLSMVCAALLANETNLKNELNNEEIRANMASSFNESSNINLLNEKPTSEGKLNLNETPCFKIDKISLLSENEVASFNASSGADEAIIREAYNANYSKFNSILEASLNKLDFKAGSCLGKNSINLIINSFNNEIIKSGYITSSASLFTKSLKDAKLEFVINLGLIDDISINEVDNQRNRASLFSAFGEYSHKNKVANIRDIEQALESLQNVSKNDVSIKFLPSNRAGFSNIVITRVDSFPLKAAISIDNLGSKQSGKYQGMVNLSTLNLLGFNEIFSFSRGKDIFKKYEVTNKFNGATDHGASNNYYYGFTIPFGYFMLEYEKSKYDYAQIINAAYNLYTYKGRSESDSLNLAYTFYRDSNFKNSAYVKLFKRKNKNYLEDYELDNQARRNAGYEVGVKSSWSSYNQAFSAKLAYKKGTGIFRSQPDPLEDSGEATSRFALINLNLNYKYKFELPLSYDLNINARYGLNKLSLQDRFSIGGYHSVRGFDGESSLVGNHGVSVRNTLSYNYYKSNSVYAGLDAGMVRAANSGIKDKNTLAGYAIGLRGSIKAYNNLSYDISVSKPLYKPKSFESKSTNVNFIISYEF
>NC_009795.1|WP_012000859.1|2279_2501_+|hypothetical-protein
MGFKKVNTTPATSEENFINQARGETSEAKKPKNLKRDKSFLLYFTQDEFERVKIEAEKIGMGVNQYIRFKIFS
>NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase
MVISIVNEKGGSGKTTLAVNLAARLSEDGDNVLLIDADPQRSTEVFSDIRSQSNLKPLFSSVSKTGVSLGDEIKRMRANFDSIVVDTGGRDSKEMRKAMLSSNVLIIPTIPSQYDVSVLDRMLDLSSEAKELNEKLLTLILVNRVSPNPFLAKELESMREYIDDAKKERNLSDVFLLNSVIYERQAYRKTVSNGNSLSEFCKNGDRALEDFESFYAELLQVVKENIKD
>NC_009795.1|WP_012000864.1|0_1293_+|Cpp22
MPRKRKKIYIDVPYSLKNTAKTMGAMWDSDEKRWFIYDTFDFEALVKLLEENKKEGASKKIVLSDGITKFKVPYSQKYQIDITDVSLKFKAALNAAGLEVDTPIMDGILRRVRVDGDKGAQKSGAYVGYLDGTPAGFIQNFKSGFSSNWKYETLDILPYSGELIYSKKTQNLSNDNTVFIQKQLQRENELEDEYKKTARILLDEFLAANFAALDHAYFIRKRIYKNYGLKQDRFGNLLMPLFDINEKFWSLQRIFPNGNKMIGALLSNEQKKNGEKLLAKKRGNFFIISDDMDLYNKNSAKLNIEALLKYNKIYICEGFATAASVHEACKTPVIVGLDVGNLEFVVQNFFARFCNTHIIIAADNDVKKEKDSGFNIGKEKAMQIKNNFKNVSVCIPNFNDTEISSGYSDFNDLYNSRGIDEVGRQLEILL
>NC_009795.1|WP_012000876.1|9806_10121_+|hypothetical-protein
MKFRNFILFIITLIGCSGCYIGEPSYEVFKETLKANIGNPNILLAQNNKRVYSEDRYIYEFERPKGCRYGYLTNKDDKPERVLGWVILSGKEFCKERRAWALSF
>NC_009795.1|WP_012000871.1|10510_11440_+|hypothetical-protein
MSLTDKSFNETYRQSLSSNDLYNIELAINFIKQSSFYNTSLDNTNAFNPDKKQYEDRYIYLDSFTNNREFYDKNLKVDTKLSNDIANFATGFAKGGINLVKDTITGVYYLVSNPKEFVNALANIPNIPSEIKEGIDKGNLDVVLGDYESVTARDLEFIAGLTGPSAITNKAVKAAWDRFGKKSSGVTSDVTKIDNPAIEVVKDKDSAANVALYEKYKKELSNLEISSLFNKDGTLTKEAILKREQIIAGDNLGNIELIKELTKDGSNIKDWAKFKIDANKAEIHFYYNEKNNRAYYDMDYKTKFKVGKK
>NC_009795.1|WP_012000878.1|11436_12048_+|hypothetical-protein
MKVRLKAGVDNRLCPIVKCFDEKFNKYLRPSILYEIVQINVKDIQNKCSCTYMIISNDNKYGAYFSADLFDIVDDKIDNDWTIRHNNSEIIMAPRVINYQDFWNNYVDGCLKEEKIYCERFSHIVQNQFLKKWFRKIFNDYQDPSIKAIGVDTQEDGYVVCPHCYNAEQASAELGVIKCEKCNQEYNNPLAKICPSGIEVVDE
>NC_009795.1|WP_155759023.1|12117_12291_+|hypothetical-protein
MDTWNLQGVKHLKDILNSNIEFKKVTNSKDIAFLEKRLPDGRGVRLELNGKFKGFID
>NC_009795.1|WP_012000875.1|12290_12734_+|hypothetical-protein
MEILELLLDKVKLENCLNLTKVLIENSEEILNVNSTIYSNLSKENYKNFRFDETQNGYIYFQLKNSKIFDLKFEFFELYILIYNNENELTLSFDFNEVNKISLQNFIDFCKKMANALNTKFYYCGLEPAQDTSTQFFTYNGVGKINW
>NC_009795.1|WP_012000846.1|12789_13164_+|hypothetical-protein
MRKIRELLAKSLFRLASTDYQTQYIDNSTIYEYVVPEDLIEEVANFCREAQLDCFKNNFSERELEFANILRNKILNLPNGDIYGTNIWAELKIDAEKFLNILGYQIKDFDYSTIDNIDRNELGK
>NC_009795.1|WP_012000847.1|13583_13859_+|hypothetical-protein
MRELYKIYLKDNAQLGQTPKTIHYSGSTLLPKPFALSIVKYSDNEGYYLLYLDKFGEEQTDTYHETLEDAFGQAEFEFGVKKDEWFLVKNQ
>NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein
MNKKLKIVLQTEFACDSVFWIYDEFGENINGGTWVEQEDEISWDSKLPDELLSCPDIKRLSMEIMKEYNSLFINNEKEFSYKGFASPKSEAKYMQKINELRKILYEKCGDKYEIVGDLR
>NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein
MINKSHKRYNNKTLLSQKGILMKNLKLIFISTLLITSNLYSNDRIQPSFDCSKAKTRVEKLVCSDEDLSRVDRDMQKAYDLMMGKYDLAYMNEEAKEEIKPYLEKLKQSQIDWVKYRDKRCNAEKDEKEFRSCVFSRYINRIQSIVPSYNWRIGFSINDKNSTNDLCYNYFTQKFWMDSPKPVNKDNPPYGEDKEFYEKFLIDALDEDVAKRELNTTTNYYYTKLDFAPVGSFIMCVGIGGEEKDIYDLRSKTYKPYCTKSGIQFSDFLDGDYIGPGQKPVSGLKFKEVEETKEEFKKRGLDYKKYDIFSTEVYKKTIKNDTGGFRNEIYSTDKSYDANILSDGMVRILYASNLEWDKSEEKLGRYTHPDGYSSSPTSIVADKFFFRVFTGKHANNLICRMPIQSRFKDRNDTKLIREYLDQFKEF
>NC_009795.1|WP_012000850.1|15546_18306_+|hypothetical-protein
MPINERNASDFKNKLRDTLKDAEGFKYYLYYDTNKIATIGCGFNVTLKDILQKVCDEIYSKPKMDEKEFAGLLNTIKGVEIKTDDNLRSKVSDYLDSIKTEDKKSAKFGKFELNDKQIGDILPEVVEMFRDGLNKKLAYTSISPQESKIDENTIGSNEYIALMSMTYNNPSLVGNGLKAHLRARNRFGAWYEIRYKSNGDNEIGIAKRRFIESNEFGLFESNENNNAVEENRLTNISINAISFEECLDLFSLLNVAKIKDKDEPSVTYLQNAIAYETIKEFKGNKTIAGYSKGNDDFNTHYRKYNTILQFFADKINALLKNVTNKSFKLEDIYVITTKGDNSHNISRINKLLKIRAENGEFKPEAKRDILLIYPTASALPVMPIQPKNTTFTIVLADNTSLDCSNLNPNGNSNESEIVLMNYKQDVRVPNKNSRDEEISFIKPSTNGETIIYKNANDIFISQDERYAFNNGNVITLNFFEKMSFNLLNFAKENSYSIRSDKASSMFDIKLRLPDATDSISTKNEGNFNIVVTNLIIEDEEGKSCDIKEVYLHNGEDKRVYPSYYLKKNDDKDADSNSSSKNSYTAKFRININLDKNSSGYKKTSKFIIATFDLSKEYNTSEIHAKEDTAVVTLASKDKNNGGAEFNIKVSTVAYQKNITEIRLNTSESSDATNLSIKDTLNLEAVYLPNKGDDDYKEISWAYKVIREDEYNSEVRLDKPTGIVNLSEEKFKGKKITFTPKDDIKDKELLKTLNHGNHIIIFFAYLKSPEFSTKFGKTHIRVDMKAPIYLKYSNGKLCIYEFENTDNTMCFNTSFDKESKDKKVEHMPKGTYYISSNLSSGDIDIYEDDKLSAVCYQAIDGKDREPCKIYAINSNIQRVSSAKSGINLIDSENKNRFIQKFNEVKQRVGLDSKEVKLEVG

Crispr_ID: NC_009795_3

• CRISPR_ID: NC_009795_3
• CRISPR_location: 7649-7736
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_009795_3

Consensus_repeat	Method
ACTCTGGCAGTGATATAAATTTAAA	CRISPRCasFinder

spacers of NC_009795_3

>3.1|7674|38|NC_009795|CRISPRCasFinder
TGCCAAAAGTGCTCTTAGCCTAAAAGGTGCAAACCTAA

CRISPR arrays and Neighbor proteins around NC_009795_3

CRISPR arrays

The CRISPR arrays of NC_009795_3

>merge|NC_009795|3|7649-7736|CRISPRCasFinder
ACTCTGGCAGTGATATAAATTTAAATGCCAAAAGTGCTCTTAGCCTAAAAGGTGCAAACCTAAACTCTGGCAATGATATAAATTTAAA

>NC_009795|3|3|7649-7736|CRISPRCasFinder
ACTCTGGCAGTGATATAAATTTAAA	TGCCAAAAGTGCTCTTAGCCTAAAAGGTGCAAACCTAA
ACTCTGGCAATGATATAAATTTAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009795.1|WP_012000847.1|13583_13859_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000846.1|12789_13164_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000864.1|0_1293_+|Cpp22	unknown	unknown	gnl|CDD|226990
NC_009795.1|WP_012000850.1|15546_18306_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl|CDD|225387
NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein	unknown	unknown	gnl|CDD|226868
NC_009795.1|WP_012000876.1|9806_10121_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|349760
NC_009795.1|WP_012000859.1|2279_2501_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_155759023.1|12117_12291_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000878.1|11436_12048_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000875.1|12290_12734_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_012000871.1|10510_11440_+|hypothetical-protein	unknown	unknown	unknown
NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein	unknown	unknown	gnl|CDD|197339

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl|CDD|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.40205e-96
NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein	gnl|CDD|197339	cd10312, Deadenylase_CCR4b, C-terminal deadenylase domain of CCR4b, also known as CCR4-NOT transcription complex subunit 6-like. This subfamily contains the C-terminal catalytic domain of the deadenylase, CCR4b, also known as CCR4-NOT transcription complex subunit 6-like (CNOT6L). CCR4 belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. CCR4 is the major deadenylase subunit of the CCR4-NOT transcription complex, which contains two deadenylase subunits and several noncatalytic subunits. The other deadenylase subunit, Caf1, is a DEDD-type protein and does not belong in this superfamily. There are two vertebrate CCR4 proteins, CCR4a (also called CCR4-NOT transcription complex subunit 6 or CNOT6) and CCR4b. CCR4b associates with other components, such as CNOT1-3 and Caf1, to form a CCR4-NOT multisubunit complex, which regulates transcription and mRNA degradation. The nuclease domain of CCR4b exhibits Mg2+-dependent deadenylase activity with strict specificity for poly (A) RNA as substrate. CCR4b is mainly localized in the cytoplasm. It regulates cell growth and influences cell cycle progression by regulating p27/Kip1 mRNA levels. It contributes to the prevention of cell death by regulating insulin-like growth factor-binding protein 5.	0.00368005
NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein	gnl|CDD|226868	COG4461, LprI, Uncharacterized protein conserved in bacteria, putative lipoprotein [Function unknown].	1.05785e-12
NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase	gnl|CDD|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.93658e-35
NC_009795.1|WP_012000864.1|0_1293_+|Cpp22	gnl|CDD|226990	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown].	7.68145e-25

Protein sequences

>NC_009795.1|WP_012000857.1|2868_4641_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRTLLSLSMVCAALLANETNLKNELNNEEIRANMASSFNESSNINLLNEKPTSEGKLNLNETPCFKIDKISLLSENEVASFNASSGADEAIIREAYNANYSKFNSILEASLNKLDFKAGSCLGKNSINLIINSFNNEIIKSGYITSSASLFTKSLKDAKLEFVINLGLIDDISINEVDNQRNRASLFSAFGEYSHKNKVANIRDIEQALESLQNVSKNDVSIKFLPSNRAGFSNIVITRVDSFPLKAAISIDNLGSKQSGKYQGMVNLSTLNLLGFNEIFSFSRGKDIFKKYEVTNKFNGATDHGASNNYYYGFTIPFGYFMLEYEKSKYDYAQIINAAYNLYTYKGRSESDSLNLAYTFYRDSNFKNSAYVKLFKRKNKNYLEDYELDNQARRNAGYEVGVKSSWSSYNQAFSAKLAYKKGTGIFRSQPDPLEDSGEATSRFALINLNLNYKYKFELPLSYDLNINARYGLNKLSLQDRFSIGGYHSVRGFDGESSLVGNHGVSVRNTLSYNYYKSNSVYAGLDAGMVRAANSGIKDKNTLAGYAIGLRGSIKAYNNLSYDISVSKPLYKPKSFESKSTNVNFIISYEF
>NC_009795.1|WP_012000859.1|2279_2501_+|hypothetical-protein
MGFKKVNTTPATSEENFINQARGETSEAKKPKNLKRDKSFLLYFTQDEFERVKIEAEKIGMGVNQYIRFKIFS
>NC_009795.1|WP_012000853.1|1590_2277_+|AAA-family-ATPase
MVISIVNEKGGSGKTTLAVNLAARLSEDGDNVLLIDADPQRSTEVFSDIRSQSNLKPLFSSVSKTGVSLGDEIKRMRANFDSIVVDTGGRDSKEMRKAMLSSNVLIIPTIPSQYDVSVLDRMLDLSSEAKELNEKLLTLILVNRVSPNPFLAKELESMREYIDDAKKERNLSDVFLLNSVIYERQAYRKTVSNGNSLSEFCKNGDRALEDFESFYAELLQVVKENIKD
>NC_009795.1|WP_012000864.1|0_1293_+|Cpp22
MPRKRKKIYIDVPYSLKNTAKTMGAMWDSDEKRWFIYDTFDFEALVKLLEENKKEGASKKIVLSDGITKFKVPYSQKYQIDITDVSLKFKAALNAAGLEVDTPIMDGILRRVRVDGDKGAQKSGAYVGYLDGTPAGFIQNFKSGFSSNWKYETLDILPYSGELIYSKKTQNLSNDNTVFIQKQLQRENELEDEYKKTARILLDEFLAANFAALDHAYFIRKRIYKNYGLKQDRFGNLLMPLFDINEKFWSLQRIFPNGNKMIGALLSNEQKKNGEKLLAKKRGNFFIISDDMDLYNKNSAKLNIEALLKYNKIYICEGFATAASVHEACKTPVIVGLDVGNLEFVVQNFFARFCNTHIIIAADNDVKKEKDSGFNIGKEKAMQIKNNFKNVSVCIPNFNDTEISSGYSDFNDLYNSRGIDEVGRQLEILL
>NC_009795.1|WP_012000876.1|9806_10121_+|hypothetical-protein
MKFRNFILFIITLIGCSGCYIGEPSYEVFKETLKANIGNPNILLAQNNKRVYSEDRYIYEFERPKGCRYGYLTNKDDKPERVLGWVILSGKEFCKERRAWALSF
>NC_009795.1|WP_012000871.1|10510_11440_+|hypothetical-protein
MSLTDKSFNETYRQSLSSNDLYNIELAINFIKQSSFYNTSLDNTNAFNPDKKQYEDRYIYLDSFTNNREFYDKNLKVDTKLSNDIANFATGFAKGGINLVKDTITGVYYLVSNPKEFVNALANIPNIPSEIKEGIDKGNLDVVLGDYESVTARDLEFIAGLTGPSAITNKAVKAAWDRFGKKSSGVTSDVTKIDNPAIEVVKDKDSAANVALYEKYKKELSNLEISSLFNKDGTLTKEAILKREQIIAGDNLGNIELIKELTKDGSNIKDWAKFKIDANKAEIHFYYNEKNNRAYYDMDYKTKFKVGKK
>NC_009795.1|WP_012000878.1|11436_12048_+|hypothetical-protein
MKVRLKAGVDNRLCPIVKCFDEKFNKYLRPSILYEIVQINVKDIQNKCSCTYMIISNDNKYGAYFSADLFDIVDDKIDNDWTIRHNNSEIIMAPRVINYQDFWNNYVDGCLKEEKIYCERFSHIVQNQFLKKWFRKIFNDYQDPSIKAIGVDTQEDGYVVCPHCYNAEQASAELGVIKCEKCNQEYNNPLAKICPSGIEVVDE
>NC_009795.1|WP_155759023.1|12117_12291_+|hypothetical-protein
MDTWNLQGVKHLKDILNSNIEFKKVTNSKDIAFLEKRLPDGRGVRLELNGKFKGFID
>NC_009795.1|WP_012000875.1|12290_12734_+|hypothetical-protein
MEILELLLDKVKLENCLNLTKVLIENSEEILNVNSTIYSNLSKENYKNFRFDETQNGYIYFQLKNSKIFDLKFEFFELYILIYNNENELTLSFDFNEVNKISLQNFIDFCKKMANALNTKFYYCGLEPAQDTSTQFFTYNGVGKINW
>NC_009795.1|WP_012000846.1|12789_13164_+|hypothetical-protein
MRKIRELLAKSLFRLASTDYQTQYIDNSTIYEYVVPEDLIEEVANFCREAQLDCFKNNFSERELEFANILRNKILNLPNGDIYGTNIWAELKIDAEKFLNILGYQIKDFDYSTIDNIDRNELGK
>NC_009795.1|WP_012000847.1|13583_13859_+|hypothetical-protein
MRELYKIYLKDNAQLGQTPKTIHYSGSTLLPKPFALSIVKYSDNEGYYLLYLDKFGEEQTDTYHETLEDAFGQAEFEFGVKKDEWFLVKNQ
>NC_009795.1|WP_048809964.1|13890_14250_+|hypothetical-protein
MNKKLKIVLQTEFACDSVFWIYDEFGENINGGTWVEQEDEISWDSKLPDELLSCPDIKRLSMEIMKEYNSLFINNEKEFSYKGFASPKSEAKYMQKINELRKILYEKCGDKYEIVGDLR
>NC_009795.1|WP_155759024.1|14266_15547_+|DUF1311-domain-containing-protein
MINKSHKRYNNKTLLSQKGILMKNLKLIFISTLLITSNLYSNDRIQPSFDCSKAKTRVEKLVCSDEDLSRVDRDMQKAYDLMMGKYDLAYMNEEAKEEIKPYLEKLKQSQIDWVKYRDKRCNAEKDEKEFRSCVFSRYINRIQSIVPSYNWRIGFSINDKNSTNDLCYNYFTQKFWMDSPKPVNKDNPPYGEDKEFYEKFLIDALDEDVAKRELNTTTNYYYTKLDFAPVGSFIMCVGIGGEEKDIYDLRSKTYKPYCTKSGIQFSDFLDGDYIGPGQKPVSGLKFKEVEETKEEFKKRGLDYKKYDIFSTEVYKKTIKNDTGGFRNEIYSTDKSYDANILSDGMVRILYASNLEWDKSEEKLGRYTHPDGYSSSPTSIVADKFFFRVFTGKHANNLICRMPIQSRFKDRNDTKLIREYLDQFKEF
>NC_009795.1|WP_012000850.1|15546_18306_+|hypothetical-protein
MPINERNASDFKNKLRDTLKDAEGFKYYLYYDTNKIATIGCGFNVTLKDILQKVCDEIYSKPKMDEKEFAGLLNTIKGVEIKTDDNLRSKVSDYLDSIKTEDKKSAKFGKFELNDKQIGDILPEVVEMFRDGLNKKLAYTSISPQESKIDENTIGSNEYIALMSMTYNNPSLVGNGLKAHLRARNRFGAWYEIRYKSNGDNEIGIAKRRFIESNEFGLFESNENNNAVEENRLTNISINAISFEECLDLFSLLNVAKIKDKDEPSVTYLQNAIAYETIKEFKGNKTIAGYSKGNDDFNTHYRKYNTILQFFADKINALLKNVTNKSFKLEDIYVITTKGDNSHNISRINKLLKIRAENGEFKPEAKRDILLIYPTASALPVMPIQPKNTTFTIVLADNTSLDCSNLNPNGNSNESEIVLMNYKQDVRVPNKNSRDEEISFIKPSTNGETIIYKNANDIFISQDERYAFNNGNVITLNFFEKMSFNLLNFAKENSYSIRSDKASSMFDIKLRLPDATDSISTKNEGNFNIVVTNLIIEDEEGKSCDIKEVYLHNGEDKRVYPSYYLKKNDDKDADSNSSSKNSYTAKFRININLDKNSSGYKKTSKFIIATFDLSKEYNTSEIHAKEDTAVVTLASKDKNNGGAEFNIKVSTVAYQKNITEIRLNTSESSDATNLSIKDTLNLEAVYLPNKGDDDYKEISWAYKVIREDEYNSEVRLDKPTGIVNLSEEKFKGKKITFTPKDDIKDKELLKTLNHGNHIIIFFAYLKSPEFSTKFGKTHIRVDMKAPIYLKYSNGKLCIYEFENTDNTMCFNTSFDKESKDKKVEHMPKGTYYISSNLSSGDIDIYEDDKLSAVCYQAIDGKDREPCKIYAINSNIQRVSSAKSGINLIDSENKNRFIQKFNEVKQRVGLDSKEVKLEVG

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_009795_1	1.1|7206|38|NC_009795|CRISPRCasFinder	7206-7243	38	NC_009795	Campylobacter concisus 13826 plasmid pCCON31, complete sequence	7206-7243	0	1.0
NC_009795_2	2.1|7428|38|NC_009795|CRISPRCasFinder	7428-7465	38	NC_009795	Campylobacter concisus 13826 plasmid pCCON31, complete sequence	7428-7465	0	1.0
NC_009795_3	3.1|7674|38|NC_009795|CRISPRCasFinder	7674-7711	38	NC_009795	Campylobacter concisus 13826 plasmid pCCON31, complete sequence	7674-7711	0	1.0

1. spacer 1.1|7206|38|NC_009795|CRISPRCasFinder matches to NC_009795 (Campylobacter concisus 13826 plasmid pCCON31, complete sequence) position: , mismatch: 0, identity: 1.0

tgctaaaaacactcttgtagtctcatcatcacatctaa	CRISPR spacer
tgctaaaaacactcttgtagtctcatcatcacatctaa	Protospacer
**************************************

2. spacer 2.1|7428|38|NC_009795|CRISPRCasFinder matches to NC_009795 (Campylobacter concisus 13826 plasmid pCCON31, complete sequence) position: , mismatch: 0, identity: 1.0

ctcagctaacgatatctatctagtatcatctaagctaa	CRISPR spacer
ctcagctaacgatatctatctagtatcatctaagctaa	Protospacer
**************************************

3. spacer 3.1|7674|38|NC_009795|CRISPRCasFinder matches to NC_009795 (Campylobacter concisus 13826 plasmid pCCON31, complete sequence) position: , mismatch: 0, identity: 1.0

tgccaaaagtgctcttagcctaaaaggtgcaaacctaa	CRISPR spacer
tgccaaaagtgctcttagcctaaaaggtgcaaacctaa	Protospacer
**************************************

2. NC_009802

CRISPR-Cas detection and classification

Crispr_ID: NC_009802_1

• CRISPR_ID: NC_009802_1
• CRISPR_location: 1971606-1971741
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_009802_1

Consensus_repeat	Method
GGTTCAGGCTGCGGAGTTGGATTTTCTGGTT	PILER-CR

spacers of NC_009802_1

>1.1|1971637|22|NC_009802|PILER-CR
TTCTGGAGTTGGCTCAGGTTTT
>1.2|1971690|32|NC_009802|PILER-CR
CTGGTTCTGGTTTTGGTTCAACTGGCTCAACC

CRISPR arrays and Neighbor proteins around NC_009802_1

CRISPR arrays

The CRISPR arrays of NC_009802_1

>merge|NC_009802|1|1971606-1971741|PILER-CR
GGTTCAGGCTGCGGAGTTGGTTCTGGAGTTGGCTCAGGTTTTGGTTCTGGTTGTGGGGTTGGATTTTCTGGTTCTGGTTCTGGTTTTGGTTCAACTGGCTCAACCGGTTTAGGCTGCGGAGTTGGATTTTCTGGTT

>NC_009802|1|1|1971606-1971741|PILER-CR
GGTTCAGGCTGCGGAGTTGGTTCTGGAGTTG	GCTCAGGTTTTGGTTCTGGTTG
TGGGGTTGGATTTTCTGGTTCTGGTTCTGGT	TTTGGTTCAACTGGCTCAACCGGTTTAGGCTG
CGGAGTTGGATTTTCTGGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_009802.2|WP_012140615.1|1948118_1949228_+|hypothetical-protein	unknown	unknown	gnl|CDD|199908
NC_009802.2|WP_012140610.1|1942486_1944121_-|CTP-synthase	unknown	unknown	gnl|CDD|235437
NC_009802.2|WP_012140612.1|1944464_1946000_+|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl|CDD|376587
NC_009802.2|WP_012140625.1|1980452_1981187_-|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|238574
NC_009802.2|WP_012140620.1|1972433_1973840_-|hypothetical-protein	unknown	unknown	unknown
NC_009802.2|WP_048809901.1|1978723_1980397_+|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|234861
NC_009802.2|WP_012140616.1|1949238_1949799_-|hypothetical-protein	unknown	unknown	unknown
NC_009802.2|WP_012140617.1|1950109_1951876_+|aryl-sulfate-sulfotransferase	unknown	unknown	gnl|CDD|368677
NC_009802.2|WP_012140621.1|1974012_1977234_-|retention-module-containing-protein	unknown	unknown	gnl|CDD|368502
NC_009802.2|WP_155759016.1|1952329_1967578_-|retention-module-containing-protein	unknown	unknown	gnl|CDD|375438
NC_009802.2|WP_012140628.1|1986225_1989171_-|retention-module-containing-protein	unknown	unknown	gnl|CDD|223021
NC_009802.2|WP_048809902.1|1981959_1986096_-|hypothetical-protein	unknown	unknown	gnl|CDD|380205
NC_009802.2|WP_155759015.1|1947224_1948073_-|hypothetical-protein	unknown	unknown	unknown
NC_009802.2|WP_012140613.1|1945992_1947117_+|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl|CDD|376764
NC_009802.2|WP_012140623.1|1977595_1978630_+|type-II-asparaginase	unknown	unknown	gnl|CDD|182958
NC_009802.2|WP_012140618.1|1951912_1952263_-|hypothetical-protein	unknown	unknown	unknown
NC_009802.2|WP_012140626.1|1981272_1981809_-|hypothetical-protein	unknown	unknown	unknown
NC_009802.2|WP_012140630.1|1989685_1990375_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|381085
NC_009802.2|WP_012140629.1|1989442_1989625_-|hypothetical-protein	unknown	unknown	unknown
NC_009802.2|WP_048809899.1|1944247_1944463_+|DUF4492-domain-containing-protein	unknown	unknown	gnl|CDD|373370

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_009802.2|WP_012140615.1|1948118_1949228_+|hypothetical-protein	gnl|CDD|199908	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40. Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding.	8.65377e-11
NC_009802.2|WP_012140610.1|1942486_1944121_-|CTP-synthase	gnl|CDD|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NC_009802.2|WP_012140612.1|1944464_1946000_+|cytochrome-ubiquinol-oxidase-subunit-I	gnl|CDD|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	3.54716e-157
NC_009802.2|WP_012140630.1|1989685_1990375_-|response-regulator-transcription-factor	gnl|CDD|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	3.40516e-25
NC_009802.2|WP_012140625.1|1980452_1981187_-|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	gnl|CDD|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	1.34434e-75
NC_009802.2|WP_048809901.1|1978723_1980397_+|dihydroxy-acid-dehydratase	gnl|CDD|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NC_009802.2|WP_012140617.1|1950109_1951876_+|aryl-sulfate-sulfotransferase	gnl|CDD|368677	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.	1.09063e-149
NC_009802.2|WP_012140621.1|1974012_1977234_-|retention-module-containing-protein	gnl|CDD|368502	pfam05564, Auxin_repressed, Dormancy/auxin associated protein. This family contains several plant dormancy-associated and auxin-repressed proteins the function of which are poorly understood.	0.000109016
NC_009802.2|WP_155759016.1|1952329_1967578_-|retention-module-containing-protein	gnl|CDD|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	4.95797e-06
NC_009802.2|WP_012140628.1|1986225_1989171_-|retention-module-containing-protein	gnl|CDD|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	5.10291e-08
NC_009802.2|WP_048809899.1|1944247_1944463_+|DUF4492-domain-containing-protein	gnl|CDD|373370	pfam14899, DUF4492, Domain of unknown function (DUF4492). This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length. The function of these proteins is unknown.	7.51849e-22
NC_009802.2|WP_012140613.1|1945992_1947117_+|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl|CDD|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	7.35153e-61
NC_009802.2|WP_012140623.1|1977595_1978630_+|type-II-asparaginase	gnl|CDD|182958	PRK11096, ansB, L-asparaginase II; Provisional.	7.43711e-154
NC_009802.2|WP_048809902.1|1981959_1986096_-|hypothetical-protein	gnl|CDD|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	1.2639e-05

Protein sequences

>NC_009802.2|WP_155759016.1|1952329_1967578_-|retention-module-containing-protein
MNMAKKLGTIKSISGSAEVIAVDKSGNQRVLKVGDSLYEGESVKTTSADSKVVIATNNGKELSMIGEDTLSLDPKATAGDAQVAALQKALLNGANLEDLEETAAGGNSGGRGDGMSLGETRFEHGGHYSNISASTSAINPLGAASFAGPAEGKSGGLDSGRDGSGDDTAGAGNTIDPETTRKPSNPEIKFPEDTNKDGKISDDENKANDNDAGKTTVEVTIPKDGSVKPGDKVVVTDDNGKKTEKPINQDDIDKGKIDIPVDLNPGKDNNVTAEIINPNNPNNPGKDSKVIGEDSENTKAPEAPVITEVIDDAKGYGEDTKVGNVLDVKGHLTNDKTPTIKGTAKAGSKVEIYDNGDRIGETTAKADGSWEFAAPELTKQGEHKFTATAENKFGKSTPSNEATIDLDSIAPKLDNVKITPIDTNSKADDTAELTMGTGHTDTPNAEILFRDVDNNIIGKGHANSAGDFLIQLDKAVQPGTPVFVQAIDKAGNAGTEMATAGNIEHPNDHTAPKVDIDTVTPVDETNPSDGTPDKGIVKGKSDEPNAPVVVTDENGKTIGTGTTDDKGNFEITTDPIKPGDKVKVEVTDKAGNKGSDTETAGDTEILHKDLPEAPVINEVIDDVKGYGEDTKVGNVLDVKGHLTNDKTPTIKGTAKAGSKVEIYDNGDRIGETTAKSDGSWEFTPELTKQGEHKFTATAENKFGKSTPSNEATIDLDSIAPKLDNVKITPIDTNSKADDTAELTMGTGHTDTPNAEILFRDVDNNIIGKGHANSAGDFLIQLDKAVQPGTPVFVQAIDKAGNAGTEMATAGNIEHPNDHTAPKVDIDTVTPVDETNPSDGTPDKGIVKGKSDEPNAPVVVTDENGKTIGTGTTDDKGNFEITTDPIKPGDKVKVEVTDKAGNKGSDTETAGDTEILHKDLPEAPVINEIIDDVKGYGEDTKVGNVLDVKGHLTNDKTPTIKGTAKAGSKVEIYDNGDRIGETTAKSDGSWEFTPELTKQGEHKFTATAENKFGKSTPSNEATIDLDSIAPKLDNVKITPIDTNSKADDTAELTMGTGHTDTPNAEILFRDVDNNIIGKGHANSAGDFLIQLDKAVQPGTPVFVQAIDKAGNAGTEMATAGNIEHPNDHTAPKVDIDTVTPVDETNPSDGTPDKGIVKGKSDEPNAPVVVTDENGKTIGTGTTDDKGNFEITTDPIKPGDKVKVEVTDKAGNKGSDTETAGDTEILHKDLPEAPVINEIIDDAKGYGEDTKVGNVLDVKGHLTNDKTPTIKGTAKAGSKVEIYDNGDRIGETTAKADGSWEFAAPELTKQGEHKFTATAENKFGKSTPSNEATIDLDSIAPKLDNVKITPIDTNSKADDTAELTMGTGHTDTPNAEILFRDVDNNIIGKGHANSAGDFLIQLDKAVQPGTPVFVQAIDKAGNAGTEMATAGNIEHPNDHTAPSEPTITFVEDTNPKDGKLNKAENGSDSDNANTTAKISIPTDAVVNDVIKYTVNGEEKSHPITDADKAKGHIEVKVPVVDGQTSTITAKIVDQAGNASKEVSGSVDVDLTIGNPKVRFLEDADNNGVLSVAEVAAIKDGKAHWVIDIPTDGSVKAGDVIQSIDGKGNWVKFVEITDEMIKDGRFEATFNVGINKLKDGKYETPEYRFADDAGNISDSSKATLTLDSELTRQPSNPSITFPEDTNKDGKISDDENKAGDKDAGKTTVEVTIPKDGSVKPGDKVVVTDDNGKKTEKPINQDDIDKGKIDIPVDLNPGKDNNVTAEIINPNNPNNPGKDSKVIGEASNTVKVTIDEIIDDVKGYGEDTKVGNVLDVKGHLTNDNLPTFKGSAAPGATVEIYESFYTTTEKTLVGKTVADANGKWSFTPTEAMGDGEHYFEAVATDKVGNKSTSDRVSLDVDTFADAPVIDAVNDNVDSQTGNVLDAKTKVALTNDSTPTLEGYAEPDSVITIYEISELNGEKTAIGTVTADNHGGWKFELPELGDGEYKYTTRAQDKAGNISDFSEVVVVNADLIAPSEPTITFVEDVNPKDGKLNKAENGKDGDSTSTKAQISVPGDAEENDVIHYTVNGEEKTHTITYNDRVTGYVEIKVPVVDGKASSVTAKIVDQAGNASKEVSSSIDSDFTAPNVKITGIIDNVEGGVYKGNVAGTNTNDNKPTIKGTADANQEVVLYDNNKEFGRVTADKDGNWEFKPSNYKEPLADLVGRVHVIKAVVTDAAGNTSEATSALEVDTTIGAPKVSIKEDADNNGVLSVEEAKNLKDSKIHWEVEIPKDGTVSAGDVLQVLGKDGKWKTEKVLSNDDLGKSFEYEATLSGKHFESPSYRIVDLVGNQSTAIHANVQLDSEFSRKPSNPSITFPEDTNKDGKISDDENKAGDKDAGKTTVEVTIPKDGSVKPGDKVVVTDDNGKKTEKPINQDDIDKGKIDIPVDLNPGKDNNVTAEIINPNNPNNPGKDSKVIGEASSTVKVTIDEIIDDVTGGVVNGDVKNGLTNDNLPTFKGSAAPGATVEIYESFYTTTEKTLVGKTVADANGKWSFTPTEAMGDGEHYFEAVATDKVGNKSTSDRVSLDVDTFADAPVIDAVNDNVDSQTGNVLDAKTKVALTNDSTPTLEGYAEPDSVITIYEISELNGEKTAIGTVTADNHGGWKFELPELGDGEYKYTTRAQDKAGNISDFSEVVVVNADLIAPSEPTITFVEDVNPKDGKLNKAENGKDGDSTSTKAQISVPGDAEENDVIHYTVNGEEKTHTITYNDRVTGYVEIKVPVVDGKASSVTAKIVDQAGNASKEVSSSIDSDFTAPNVKITGIIDNVEGGVYKGNVAGTNTNDNKPTIKGTADANQEVVLYDNNKEFGRVTADKDGNWEFKPSNYKEPLADLVGRVHVIKAVVTDAAGNTSEATSALEVDTTIGAPKVSIKEDADNNGVLSVEEAKNLKDSKIHWEVEIPKDGTVSAGDVLQVLGKDGKWKTEKVLSNDDLGKSFEYEATLSGKHFESPSYRIVDLVGNQSTAIHANVQLDSEFSRKPSNPSITFPEDTNKDGKISDDENKAGDKDAGKTTVEVTIPKDGSVKPGDKVVVTDDNGKKTEKPINQDDIDKGKIDIPVDLNPGKDNNVTAEIINPNNPNNPGKDSKVIGEASSTVKVTIDEIIDDVTGGVVNGDVKNGLTNDNLPTFKGSAAPGATVEIYESFYTTTEKTLVGKTVADANGKWSFTPTEAMGDGEHYFEAVATDKVGNKSTSDRVSLDVDTFADAPVIDAVNDNVDSQTGNVLDAKTKVALTNDSTPTLEGYAEPDSVITIYEISELNGEKTAIGTVTADNHGGWKFELPELGDGEYKYTTRAQDKAGNISDFSEVVVVNADLIAPSEPTITFVEDVNPKDGKLNKAENGKDGDSTSTKAQISVPGDAEENDVIHYTVNGEEKTHTITYNDRVTGYVEIKVPVVDGKASSVTAKIVDQAGNASKEVSSSIDSDFTAPNVKITGIIDNVEGGVYKGNVAGTNTNDNKPTIKGTADANQEVVLYDNNKEFGRVTADKDGNWEFKPSNYKEPLADLVGRVHVIKAVVTDAAGNTSEATSALEVDTTIGAPKVSIKEDADNNGVLSVEEAKNLKDSKIHWEVEIPKDGTVSAGDVLQVLGKDGKWKTEKVLSNDDLGKSFEYEATLSGKHFESPSYRIVDLVGNQSTAIHANVQLDSEFSRKPSNPSITFPEDTNKDGKISDDENKAGDKDAGKTTVEVTIPKDGSVKPGDKVVVTDDNGKKTEKPINQDDIDKGKIDIPVDLNPGKDNNVTAEIINPNNPNNPGKDSKVIGEDSENTKAPDAPVITEVIDNQRGGKFNEDVKGGLTNDSTPTFKGTAKPGTTITLKNGNDLIADNIPVKTNGSWEFTLKTPLAEGDYSITATAKNAAGKVSDPSDAATIKIDLHSDEPVITEIIDNVAGGVVNGDVKGGLTNDNTPTLKGTAEPFATVEIKIDGRGSYRFENGEVISNWTAVADKDGNWEFTTPKLSDGHHNFEAQATDVAGNNSQPSALVSIDVDTHIDAPVITAVTDNWWGGVENGGNILGVNDGFTNDTTPTFKGTAEAGSTIVLKNGNDIINKDIIVKADANGNWEFTPKSPLAEGEYNVVAIATDKAGNVSNPSNVATVNVDISTTQPVITEIIDDVAGGVVGNVKNALTNDNLPTLKGTAEAFSTVKIMVDDRLVFKDGKEVTVTADKDGNWEYTFEANLNWGGEVHAALEDGVHTLKVQTTDRAGNRSAVSEWSSVDVDTTIGAPTVKITTDINSDKKIDIADASALKDGKLKWVIDIPENTVKAGDRVQILGNDAKTWTDIFKVTAQDIAKGFIERDEFSIDMPKSRGFQTPSYRLVDDAGNVSEGSMDAVKIVGFAPKAPTIIAVLDNEYGIDPKNPTDINAGDTTGNVLEGAIAITNDKTPTLIGKAEAGTTITLKNGDTVIAEKIPVDANGNWHYEPEENSPWADGDYKITAIAKNVFGKESESSSPITVTVDTTGPEVTLTSIEDSVKTNDVVDFTGNVKGKVTNDNTPLLKGTAEAGSVIIIKYGEHHENVVTTKADKNGHWDYKITNPLSDGEHIISYQAVDKAGNTSLEYVANVTVDTKIADAKVEFIEDTDNDGKFSWKENIENPNIGRMAWKALIPNDGSIKAGDTFNYRWGASDSWHNRTITQADIDRGYIGEKVQNQYEQGQPNAGKPLAFGANANGRVYEAEAYFSDAAGNKGAKGSDKVVFDFSDSEGGAKIVNVKITSIDDNVPGWNSKTGNIITNEAAHIAGLTNDNTPTISGTTEAGAIVKVSIVNGKTHKVWEGDVKANENGEWSITTGNIADGKYSVVAVATDKSGVASSPYTVSGLEIDTTVAKPNIWVAEDRNHDGFYDNAEYHNPANGKGDITFVVEVPKDGSVKVGDTFHYTLNTDYKGWSSINGYGENITISQADIDSGSFSRVVTLCKDNQHFGLRHDGATISMKGQFKDLAGNALADETSVKFDLTKVHGGKVRSTRSLPDDILDNDSVDLSNAARINEPKAELNVLNNNKIGVSANDLLETPKDHIMSEGKSEAKPSYATASSHAGEENIATTHPIQIEEKVENHF
>NC_009802.2|WP_012140618.1|1951912_1952263_-|hypothetical-protein
MQSEKTKNLLDEVNETIDFIFRTCNRNGGTKKALEDKKLSREILKDKFKSIFLKFGQIDEASFKSAILANEEAKELNEIAMALEIDEDVSLLELERAINFDLTSVKEEIYKFQNNN
>NC_009802.2|WP_012140617.1|1950109_1951876_+|aryl-sulfate-sulfotransferase
MSKNFLGSVALAAVLVSGFGFSAPLNAGVLAHQVKVQGELGSVFINPYDVSPLTAIIDRAGKDIKDIHVKVKGKPDGGIDIDYNVSEHALLTHDGVPIWGLYPDYLNEVVLSYTFNGAKKVETYKIYAQPIVTYSRDFRFSHMQKTRVKKVDPAFKNRLYLINNTITSAYKPLDWKNGGAASWNDFTENYIVDTKGEVRWYLDYQKFYDRSERRVMDGGMMMGFHQLKNGDISFGMAQRYLRYDLMGKEIYNRPLPRGYIDLSHEVMPLKDDHALLRVAKYNYHHKNGKISHTIRDHIIEVDNTGKVVEEWDLNEIFGNNVYRSNLIKALDARAVCLNIDMDAKEIKISDDLPFGDVTSTGTGRNWAHVNSISYDESDDSIILSLRHQGIVKIGRDKKVKWILASPEGWSEDFKAKVLTPVDSKGNKIKCENSKCEGEFDWSWTQHTAWLTPRYENKGDIKHLSVFDNGDARGMEQPAFKEDKYSRAVEYKIDEKKGTVEQTWQFGKERGFDFYSAVTSNVEWQKDKSTYFISSSNVNLLRPDKTIKMVLVEIDPKTNDIKFEMDVDSASRDDVAYRAMVIDPEVFSY
>NC_009802.2|WP_012140616.1|1949238_1949799_-|hypothetical-protein
MKIVCPACLGVGEKDISEHCEICNGNTFVEKEIYDLKIKDIKNKEKEKKRKQAIEKEQIKRLYYSSEESYLKSKFLGPLKPLLLCLFLGYILKWLFDFNLDITFASLVVYILSFINFGFFPLSSLFMILGYTSLFVGYKLDYISYGFQYMNYILLGFAIFTTFYFYRIWCFVILVLYLLIKMLGYV
>NC_009802.2|WP_012140615.1|1948118_1949228_+|hypothetical-protein
MKIIRQYIIDNKVVFEKEYSYEQSHIAFNHEFVTLYIFDDIEIGYKLYLKCTGGTILSTYIYNLTDLYYILDVIHANMSGYTLQGRYDDKLENYNVLIIQQELRNGYIAYKNILVNFGEDEKEWNSKCVIGIKLTNGCYVEEYNRKQIKNKLEYYNFLFRIVIILFFSLKSCIKRCINIFSKRHKYFYLNVTLDEIYNAPLNIRFNAIVARINNVIEKKEKQQVYQKEFFYKKHSNSSSYGQSTYDNSSSYGQSTYDNSSSYGQSTYDNSSSYGQSTKETICSKCGGSGKIETTCSSCGGYGWQTCPNCNGNGTLIKFRPTYDGLGEQYTETCPKCQGSGKENCFKCNYSGKIEITCQHCNGSGYEKQY
>NC_009802.2|WP_155759015.1|1947224_1948073_-|hypothetical-protein
MKVSAKVATKQTSLEVLGYKVDKDGYFTDEFNKQAGIPSEYKIHSSTLESLVRIETQSDYMQRTFDSIDILKTVNNAYKILSQVVGEDTPTNISITKGGLLAAVINSNLDVKEGETTVFGKKQGFDKSVDSKEFSRAFELFEFMGEMKFGPGFINATDNDIAGMPKYMQDYIRSKRDFVYIDLQSGFVSTPEDRRRGYEEDELSFKKMMERNLKMLKLLFGEIDKDGKKSKDFMDSFLRFSMPPLNLVKELNENPAGKYLVDMLGIKRDVDIKNLGANAPKF
>NC_009802.2|WP_012140613.1|1945992_1947117_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MHSLSLENLQIYWWFIVSLLGGLLVFMMFVQGGQSLIFSLGKDELKKDMLINSIGRKWELTFTTLVMFGGACFAAFPLFYATSFGGAYWVWLAILFCFIIQAVSYEYRKKPDNFLGARTYEIFLFINGSLGVILIGMAVSTFFSGSDFVLNEHNFVEWKTPFRGLEALSNPYLYLLGIAMFFLSRIGGCLYLMNNIADGEFIQNARKQLIINTVLFLPFFLGFLAWVLTKDGFAYNVNGVVSLVAYKYAINLIEMPIAGILLLVGVLLVLVGIFQGAFTKSIRGIFAYGVGVTLAVTALFLITGLNGTAFYPSFSDLSSSLTIKNASSSHYTLGVMSYVSLLVPVVLAYIFIVWRAIDSKKITQDEIKNDHHAY
>NC_009802.2|WP_012140612.1|1944464_1946000_+|cytochrome-ubiquinol-oxidase-subunit-I
MSEMDFVDWSRAQFALTAIYHFLFVPLTLGLSFIIAIMETIYVKTGDKAWLEITKFWLKLFGINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAIEGLLAFFMESTFFAIMFFGWDKVSKKFHLLSTWLVAIGSNLSALWILIANGWMQYPIGMKFNPDTARMEMQNFFEVALNPLGITKFLHTVTSGYTISAIFVIGISAWFLIKKRHILLAKKSIVVASAFGLITSAFLLLSGDESAYLAAQKQPMKLAAMEGLYKGEKNAGLVAAGILNPAKKLGDDTEPFLLEIKVPYALGIMANRELDSFTPGINDLLYGNSERGIMGVEEKMAKGKVAIEALKNYKEAKKANDESLMKSSLSNLESNLNFLGYGYLKDAKDAVPPVALTFYSFHIMVALGTYFIALFAITLYLNLSKKYKFENIRAFLWICLFTIPLGYIAAEAGWIVAEVGRQPWAIQDLMTVGVGATNLSDSNVKISFILFAVLFTVLLIAEIKIMLKQIKIGFNDHA
>NC_009802.2|WP_048809899.1|1944247_1944463_+|DUF4492-domain-containing-protein
MIKNCLKNIASLYVDGFKNMKIGKKLWLLIAIKLIIMFGILKVFIFDETLNTKFQTDEEKSEFVIRNLIKE
>NC_009802.2|WP_012140610.1|1942486_1944121_-|CTP-synthase
MAKETKYIFITGGVLSSLGKGIAAASIATLLKNSGLKVSVLKADPYINVDPGTMSPLEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYSSVIEKERRGDYLGKTIQVIPHIVGEIVDRIKKAGEGKDVLIVEIGGTVGDIEGLPFLEAIRALRVEVGKKRALNIHLTLVPFIKVAGELKTKPTQHSVGELRRIGISPDIIICRSEMPLNRELKDKIAASCGVEKNCVIESLDSASIYQIPLSFLKQDILVPIAENLGFGELKPDMANWDSLVKRIIAPTNETTIAFVGKYIDLKESYKSLTEGIIHAGANLDARVNLRWIDSEKIEESNVNELLKDVDGILVAGGFGERGVLGKMQAIKFARENKIPYLGICLGMQLAMIEFARDVLGLEDANSMEFNKECKNPIIYLIDSFIDAHGKKQIRTHTSPLGGTMRLGAYNCDIKPKTLLAEIYGNAKSVKERHRHRYEANPKYKEVFEKAGLIVSGESDGLVEAIELKGHPWFVGVQCHPEFTSRLTRPNPVILGFIKSSLANHVK
>NC_009802.2|WP_012140620.1|1972433_1973840_-|hypothetical-protein
MSVEVADKEGLNLSGGVSQNGGQNDPHVTIVEEIKTLEILEPKNFLAELYGRRVADARPKAQDQILNIADATTSANDVRFDNGNDIVDMTRSIVNDAKIDAGDGDNKLRIHDNIEVRGLRFDAGAGNDEIEIRNNVGIKDHTLLYTNDGDDSVKIYGATMENAAIHTGLDNDVIDIQRCEIKNGADISLGGGNDTINTDWVGFFGDTKISLSSFTNPNEVDTLNMDNTIFNGHTTIEANDGEKTTMNIKVCGGDGEIDIKGSHANLDHTPLFDMNFLGPKFMGDVKFDGRNNKVNMHIDDSEFHGKNNEFYFSDNQNDTLNVTSAIIKNSKFYLGGGDDTVSLTMTRTDIDNNAQIFGGKGYDTLVLDNNIDFSKVSGFEELKVTSGAYVTLNGNDVAHLSDILDNGSNVVKFSEAHGTVKLNGFSETSGAENGYHRYESAYNTHLADGSEHQGTVYIDIKEDIHVDL
>NC_009802.2|WP_012140621.1|1974012_1977234_-|retention-module-containing-protein
MAAKLGSIKSISGQTEVIAVDKSGNERILKVGDSLYEGESIKTTSADAKVVIVANDGKEVSVVGEDTISLDPKEVANAQSANPEVAALQNALLNGVNITDLEETAAGGNAAAGGAGGDGVSLGAASFEEGGHYANINENFRNLTDANRAFASYDSPIGGYADNNDNGAGDNVVPQNPASPTNPTTPVTPATPVTPVTPATPATPVALSVSLDGSGEAREATPNEYLVYNLGLSAATSSTTPTDLTLNLSGASAGRDYSNAMEYSLDGGHSWTAIQNGSTISGVAPSDIANVKVRVQVIDDYGQTAGNQNEGTSSEDLGANIAPGIKDYGVYKEGVTLSVTTNNAAITSGTAEGKIIDNDDNINITENIDASTEGLNPALVNSDPDNGNTMKTIIDTKDGDDTITIKEEVYFSSGLYDLKENANDVIKMGDGDDVFNTEKDAVVENTRIDLGNAGGEKNQDTLNINGAVVTGTRFTSHDGNDVFTIKDDSGPSLGSTILDDVLFKTGSGNDTVNIEKSDNHQLIKNTKIDTGADNDTVNIKSDMYAYVTNNGTTDLTEYAGSRTDSFIKTGEGDDTINVTDASISRVDIDTGDSDTGDMLNFISAGIYNSEIKSGNGNDKIVLQDTKADVMDIYTGEGNDSLTIKGSTEIKNNSAVHNDPISSPAHVANPVANQAGIHSNYIEMGKGRDTLTIERGAEISNTKINTSSADAGVSDDRDSVDVTGAKFNNAAIETGYGDDVINLKDITMISNDGYSTYIGAGGGNDVINVSGNSSFDKAIIYTNGGDDHVNVDGDVSMVDSNIMLENGNVTLNVAKATGLVDTNIEGAGVGNAGVKTVTIDNAELRRVTINTADDGDSVTIGAGTHDNTDVKIFTQGGDDTININSDLTGTSNVNLSPAAGEAAHDHDASNINSGKGNDTINIADNVTLTNTYLSGGDGSDLVDLGKDVSLNGTAINGGDGIDTLKVHDASFNTTNAGKISGFEVLDMSDINADAKFIFHNASDIANFIKNVGGEGATSLIVKGVEGVGKFEEGSSEIASAGKEDSNGNHVYSVNDGGQTFTLTIENDITINPSM
>NC_009802.2|WP_012140623.1|1977595_1978630_+|type-II-asparaginase
MKKLVLLICILVASLYAKPNVVILATGGTIAGSASGATNAQYDAAQLGVDILIKAVPEIANLANVKGEQVANISSNNMTDEIWLKLAKRVNELLASKDVDGIVITHGTDTLEETAYFLNLVVKSDKPVVLVGAMRSATSMSADGPLNLYNAVSVAASKESFGNGVLVVLNDEINAAREVTKTNTSSVDTFKSRNTGAIGRVYYGKVVYSTKSLKKHTASSVFDVSKLETLPRVDIIYSHANDYGDIAKHLIDVGSKGIIHAGTGNGSIHNNVFTVLQEANAKGIKIVRSAIVGSGYIDSSKKMDDNGNFITASDLNPQKARILLMLALTKTSDTKEIQKFFDEY
>NC_009802.2|WP_048809901.1|1978723_1980397_+|dihydroxy-acid-dehydratase
MRSDIIKKGYTRAPHRSLLRATGLKDEDFAKPFIGVANSFIEIIPGHFFLNKYAQILKDEIRKNGCVPFEFNCIGVDDGIAMGHGGMLYSLPSREIIANSIETVMNAHALDALVCMPNCDKIVPGMVMGALRVNVPTIFVSGGPMKKGHTKDGRPIDLATAFEAVGKFETKEINEAELRDIECNACPSGGSCSGMFTANSMNTLCEAMGIALPGNGTILALTPEREELIRQAARRICQIALDEKFKIRNILNEKAIRNALVVDMAMGGSSNTVLHMLAISREAGVNLEIKELNKISQNIAHIAKISPSLPNVHMEDVGRAGGMNAVIKEISRRDNGMLNLDNLTVSGETLGERVKSSDIKDESVIHKVENAYSQVGGLAILFGNLAEQGCVIKTAGIVGEHKFSGKAVCFNSQDEAIAGISSGKVDKGDVVVIRYEGPRGGPGMQEMLSPTSLIMGRGLGADVALITDGRFSGATRGLSIGHVSPEAAEGGMIGLLQDGDIIDIDVDKYEINVRLSEAEIAKRRAEFKPVDKALTSRWLRQYQKLVTNASNGAILEA
>NC_009802.2|WP_012140625.1|1980452_1981187_-|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase
MKKILIIAGSCNSGTAGLQADIKTCARLNCYSATAVTSLVAETTDAIKSVVCLEPSFVKDQLSTLAEEFSFDAIKIGMLFSEEIMDVVREFLLTQKAKVVLDPVCVSKSGHKLIKDSAVEKLKELMKLATVATPNLDEANVLFGGNFKDLPCDIIVKKRVSEGNSIDTLYRKDGSLQNFKTPLANPLVMSGTGCTFSTALACYLAKGKSLEEAIGLSKEYICSIIKESIDTKLGKNRLLWHGAK
>NC_009802.2|WP_012140626.1|1981272_1981809_-|hypothetical-protein
MTAVAGKVKSVTSDVIAIDKNDRVRVLNVDDEVYIGESIKGESQSASVTITAVDGSDISLNGYDTIWLDSSVVSADTSAENSIDTDALFRALLGENYAEILDQMNEKVEDMFAKTQPNEAENSSNSLEDSENLADKHSANDEILSDSNELKVDNSYEHANFDVTTIYIEIDNDLNKLS
>NC_009802.2|WP_048809902.1|1981959_1986096_-|hypothetical-protein
MATRIGVIKSISQGSSVIATAKDGTQRVLKVGDEIFLGETIQTTDFDSKVVITANDGKDIAIIGKDTLNLDKSVAHNESFGDDSVADVSAIQKALLDGANITDLEETAAGGNAAAGAGGDGVSLGAASFEEGGHYSNITDDYRNLPDSSRAFQTPENSIGGYNDGNDAGNATPVAPVIPPISVDIKTLNDNFGTIQGDYSLDAPSVPRTNDATPTISGTVEPTAVRAVVSVLDKNGHEVFTKTLNPNDYADGKFKFTTNELSVDGNHDGNYEVKIVATGRDGNIATDTGNFVLDTVAKITINVETEMSLVKESEMSEGLKGNFWFNHIYEPGVSGTELRPYAFNNTEYAHNGKKQNDFVEYYMNNTKPWASFKAKELNFQQGKGGDRDNTDNDAGTVSGLDGAHNMVGKIDLDGNVVTPNSEWVAPNFKALEYFIDNAKGSDIHILRDAPNGKNTTAGAMVNLKGTMYLEPGDYKFDAKNTDDSVRFKVDGKTMVDYDTIHSENRATTTTLHVDKAGYYDFDMSYANYIFWGKLKLTVSKDGGPESILGSEASGIKLNSTDFDSYVDTVTRNVYKVTQKITGTVDNVEDGQIVTVTSSTGESHTAKVVDGKYEVEFKTSDPKATYTAKVSDLVGNEAQATSAKLNVATDLIDAIDNDASVVSANTSTGINDATKYYKYTTDDIAQTDKFSSNAPLPVLSDKTPTFTGSIDSSATKAIITVLDKNGHEVFTKELSQSEFSNGKFEVTSDNLEDGNYNIKATAIFANGDKSTIVSEFVVDKTPVTIENIKIIENDGEGLHHTLKFNLKNYEDGDKIESIKIVTADGTTNVISVGTTKPTNGVLSFEYDHKIKLGDKIEVEMTDKAGTKYTHVNEILVPTMTQFENGNDTTTNANNRSAEKLWGTMEMSESGTRADGSRIVSNDAIPYLRAVIPEDTTAGATSDNKTVSEFLNSGRGIRWSTGDVKFVSTNVDTGVTKVLLSEAIEKPIGNVTPDHYNRLTGFNNRLDGYGKMADGVYKISIDGKYQGGDELLYNSIQFTIDATAATIDNSNFNYDAATNKTTWSGNLSENGVGASYTLKQHFEEAVKGIALKDSITLRDANGHIIPANSVTLDDNGNFEAVFNGDVKANDVYLQISDIAKNTRVDAENNNNNNVITTSEGNDIITVGDGNNTINAGRGENEIRTGNGNNVIITGDNNDVITTGSGNDYIDAGRSGYTGINKGDLVNAGAGNDKVVFTFDDPRAALSQSLDGGAGTDTLIMRPMAKDGTIDFDKIDNKSLTNAIKNFEEIQLGMDEHGNDNQAVKLLNLKADNVFGITDDVNTILKISGDNKDSVSLKGFTEATSQNGVEAGYTRYEGQTSADTPKTIYIDVDNDINKQLV
>NC_009802.2|WP_012140628.1|1986225_1989171_-|retention-module-containing-protein
MQKLGVIKNILGGEIVAVDKSGNERVLKVGDSIFEGETIKANGSTKAVIAANDGKEVSLQNGESLSLDKEANALSDNPEIASIQKALLNGANITDLEETAAGGNQGGGNATGDGVSLGTASFAEGGHYSNINENYRNLTDANRAFQTPENSIGGYNDAGTDADTTTPISPVTPVTPSTPVTPPTPSTPSTPGVTVTPGTPSPANPPVITPRPGAVEITTSIDPAASEVRESGAGANGEGGHYLVYKLGLSGTPVSPSGETTDLGLNFLGGTRGEDYSSVVEYSTDNGATFQPLSGYTITGVNIEDISKVQVRIKVLDDNGQDTTKGPLHHNQNEGENTGPQGMTIDNVQKTDMVDNFAVFKEGVKLSVTPSSSYLLPTTNANMAEGKIIDNDDNIELNKDIKGNIANHTNLNTNDGDDTVSIKANLENLHLDTGSGNDVVNFDKEVTISGTKNSPSVGGVLGHYNSTTINLGSGDDVVNINADLSIFKAEIKLGAYTPSSSNSARDEAGNNTLNINANILGKETFKVIDPSIHNSWYNDNRIHTGDGDDVVNVKDGVRIERVNIQMDTGSNTFKANNVTMTDAWVDTSDRYSEARDVNTMEISNSTLTNVNLNRESQDAVLGYQSLKLDNNKGESVTAYAKDLLEVKGNNDGNSHYETGSFSSAHVIADGISIGQAGFSNKTGVDFTADISNLTAKTRVWVGSYGESNDTINFKGNNILNNLEDSSSADIDTRGGNDTINFEGKNVAGAININTDAGNDTINIGGETKFGGTHEKYVFKSVQFSSIRMGDGDDTINIDKGAELKSTTIRMGDGDDVVNLNGSLKHAGGTYWDGSSTIDLGSGNDIIHIGKDAEINADGMTSAGGEYKKEHGGIVIQGGAGTDTLDIAGNIDFSKVAGFEKVSLGGSANNVTLNLTLDDVLNITRGNLNNTLRIDGEAGDQVDMSAFSKGGVNSEGYTEYSATHNNGTTFTIEIKDEIVLHS
>NC_009802.2|WP_012140629.1|1989442_1989625_-|hypothetical-protein
MSLLAKIYRKRDENLQNLIDKLKKIYVTSGYKFMIVINKKHFDIKRLNLAVIRLNKGFLN
>NC_009802.2|WP_012140630.1|1989685_1990375_-|response-regulator-transcription-factor
MQEALEILKKVSILVAEDDEMARELIITGLKPYCDQVVGAKDGQDGLEKFKKQGFDIVMSDIHMPVLNGFEMMNEIKKLKPHQKFIVFTSYDSDENLIKSYEQGATLFLKKPIDIKDLRSMLISLSFDRDEKLVRLSDEVSINLKREKIYKNGNELYLSFLQNKIFWLFAYNLNKLVTYEMIEEFVYESTEVSKAAIQNVVLRLKRELGVKFKNISESGYILVAECKKA

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_009802_1	1.1|1971637|22|NC_009802|PILER-CR	1971637-1971658	22	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	713256-713277	2	0.909
NC_009802_1	1.1|1971637|22|NC_009802|PILER-CR	1971637-1971658	22	AP014014	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C103A-MedDCM-OCT-S38-C6, *** SEQUENCING IN PROGRESS ***	7718-7739	2	0.909
NC_009802_1	1.1|1971637|22|NC_009802|PILER-CR	1971637-1971658	22	AP014015	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C103A-MedDCM-OCT-S41-C32, *** SEQUENCING IN PROGRESS ***	7652-7673	2	0.909
NC_009802_1	1.1|1971637|22|NC_009802|PILER-CR	1971637-1971658	22	MN584918	Vibrio phage phi50-12, complete genome	11373-11394	2	0.909
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	NZ_CP027853	Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-1, complete sequence	149462-149493	7	0.781
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LR134129	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 9	829-860	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LN881734	Escherichia phage slur11, complete genome	104546-104577	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MN895437	Escherichia phage teqskov, complete genome	68246-68277	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MH837626	Escherichia phage vB_vPM_PD112, complete genome	22909-22940	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MN716856	Yersinia phage vB_YepM_ZN18, complete genome	3524-3555	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MH051915	Enterobacteria phage vB_EcoM_IME339, complete genome	53349-53380	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LR215722	Yersinia phage fPS-2 genome assembly, chromosome: I	118497-118528	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK327937	Escherichia phage vB_EcoM_G10400, complete genome	117545-117576	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MH751506	Escherichia phage T2, complete genome	114032-114063	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LN881732	Escherichia phage slur07, complete genome	46800-46831	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MN508618	UNVERIFIED: Escherichia phage ES26, complete genome	55835-55866	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MF327009	Shigella phage Sf25, complete genome	41743-41774	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	AP018813	Enterobacteria phage T2 DNA, complete genome	114025-114056	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MN580668	Salmonella phage pSe_SNUABM_01, complete genome	120968-120999	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK373781	Escherichia phage vB_EcoM_KAW1E185, complete genome	115793-115824	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	NC_025829	Shigella phage pSs-1, complete genome	120248-120279	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LN881737	Escherichia phage slur13, complete genome	126368-126399	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LR597657	Escherichia phage T4_ev240 genome assembly, chromosome: 1	115692-115723	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MN508614	UNVERIFIED: Escherichia phage ES12, complete genome	55484-55515	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KJ668714	Escherichia phage e11/2, complete genome	117357-117388	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MG010123	Staphylococcus phage SAJK-IND, partial genome	28166-28197	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MF001359	Escherichia phage EC121, partial genome	116808-116839	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MT682710	Escherichia phage vB_EcoM_FT, complete genome	57929-57960	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MG775043	Citrobacter phage vB_CroM_CrRp10, complete genome	92830-92861	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MN781580	Shigella virus KRT47, complete genome	115883-115914	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LN881726	Escherichia phage slur02, complete genome	19316-19347	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	NC_042078	Shigella phage Sf24, complete genome	41558-41589	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MH992121	UNVERIFIED: Escherichia phage MLF4, partial genome	41563-41594	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK373779	Escherichia phage vB_EcoM_G9062, complete genome	117024-117055	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KR269718	Escherichia phage HY03, complete genome	50556-50587	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MT446387	UNVERIFIED: Escherichia virus TH09, complete genome	40735-40766	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK327944	Escherichia phage vB_EcoM_G2540-3, complete genome	117212-117243	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KX452694	UNVERIFIED: Escherichia phage KPN1 genomic sequence	107159-107190	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK327936	Escherichia phage vB_EcoM_G2540, complete genome	116175-116206	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MN994497	Phage NBEco003, complete genome	51281-51312	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MH243439	Escherichia phage vB_EcoM_NBG2, complete genome	113790-113821	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK886800	Escherichia phage EcNP1, complete genome	94632-94663	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK373786	Escherichia phage vB_EcoM_R5505, complete genome	116985-117016	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LC348380	Escherichia phage T2 DNA, complete sequence	114035-114066	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MT176424	Citrobacter phage PhiZZ6, complete genome	115608-115639	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	NC_027404	Yersinia phage PST, complete genome	117268-117299	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KT184312	Enterobacteria phage Kha5h, complete genome	140911-140942	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KF925357	Escherichia phage HY01, complete genome	115103-115134	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KR233165	Escherichia phage PEC04, complete genome	121713-121744	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK327942	Escherichia phage vB_EcoM_G50, complete genome	115575-115606	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MK327928	Escherichia phage vB_EcoM_G2133, complete genome	118279-118310	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	MT176426	Serratia phage PhiZZ30, complete genome	117339-117370	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KX452698	UNVERIFIED: Shigella phage KPN5 genomic sequence	119483-119514	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KT184308	Enterobacteria phage Aplg8, complete genome	61449-61480	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	LN881729	Escherichia phage slur04, complete genome	101000-101031	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	JN202312	Enterobacteria phage ime09, complete genome	115079-115110	9	0.719
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	KP054477	Lactobacillus phage LfeInf, complete genome	37089-37120	10	0.688
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	AJ131519	Lactobacillus bacteriophage phi adh complete genome	27799-27830	10	0.688
NC_009802_1	1.2|1971690|32|NC_009802|PILER-CR	1971690-1971721	32	NC_000896	Lactobacillus prophage phiadh, complete genome	27799-27830	10	0.688

1. spacer 1.1|1971637|22|NC_009802|PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 2, identity: 0.909

ttctggagttggctcaggtttt	CRISPR spacer
ttctggagttggttcaggttta	Protospacer
************.******** 

2. spacer 1.1|1971637|22|NC_009802|PILER-CR matches to AP014014 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C103A-MedDCM-OCT-S38-C6, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 2, identity: 0.909

ttctggagttggctcaggtttt	CRISPR spacer
ttctggagttagctcaggttta	Protospacer
**********.********** 

3. spacer 1.1|1971637|22|NC_009802|PILER-CR matches to AP014015 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C103A-MedDCM-OCT-S41-C32, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 2, identity: 0.909

ttctggagttggctcaggtttt	CRISPR spacer
ttctggagttagctcaggttta	Protospacer
**********.********** 

4. spacer 1.1|1971637|22|NC_009802|PILER-CR matches to MN584918 (Vibrio phage phi50-12, complete genome) position: , mismatch: 2, identity: 0.909

ttctggagttggctcaggtttt	CRISPR spacer
ttctggagttggttcaggttta	Protospacer
************.******** 

5. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to NZ_CP027853 (Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-1, complete sequence) position: , mismatch: 7, identity: 0.781

---ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gatctg---ccggttttggttcatctggcttaact	Protospacer
   ***   *.************ ******.***.

6. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LR134129 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 9) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
aagattctggatttggttcaattggcttcaga	Protospacer
  *.****** **********.*****. *  

7. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LN881734 (Escherichia phage slur11, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgagga	Protospacer
 .*.**** **** ************* *.  

8. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MN895437 (Escherichia phage teqskov, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

9. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MH837626 (Escherichia phage vB_vPM_PD112, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

10. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MN716856 (Yersinia phage vB_YepM_ZN18, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

11. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MH051915 (Enterobacteria phage vB_EcoM_IME339, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

12. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LR215722 (Yersinia phage fPS-2 genome assembly, chromosome: I) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

13. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK327937 (Escherichia phage vB_EcoM_G10400, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

14. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MH751506 (Escherichia phage T2, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

15. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LN881732 (Escherichia phage slur07, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

16. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MN508618 (UNVERIFIED: Escherichia phage ES26, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

17. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MF327009 (Shigella phage Sf25, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgagga	Protospacer
 .*.**** **** ************* *.  

18. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to AP018813 (Enterobacteria phage T2 DNA, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

19. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MN580668 (Salmonella phage pSe_SNUABM_01, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

20. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK373781 (Escherichia phage vB_EcoM_KAW1E185, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

21. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to NC_025829 (Shigella phage pSs-1, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

22. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LN881737 (Escherichia phage slur13, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgagga	Protospacer
 .*.**** **** ************* *.  

23. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LR597657 (Escherichia phage T4_ev240 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

24. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MN508614 (UNVERIFIED: Escherichia phage ES12, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

25. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KJ668714 (Escherichia phage e11/2, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgagga	Protospacer
 .*.**** **** ************* *.  

26. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MG010123 (Staphylococcus phage SAJK-IND, partial genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

27. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MF001359 (Escherichia phage EC121, partial genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

28. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MT682710 (Escherichia phage vB_EcoM_FT, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

29. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MG775043 (Citrobacter phage vB_CroM_CrRp10, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

30. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MN781580 (Shigella virus KRT47, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

31. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LN881726 (Escherichia phage slur02, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgagga	Protospacer
 .*.**** **** ************* *.  

32. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to NC_042078 (Shigella phage Sf24, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

33. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MH992121 (UNVERIFIED: Escherichia phage MLF4, partial genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

34. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK373779 (Escherichia phage vB_EcoM_G9062, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

35. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KR269718 (Escherichia phage HY03, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

36. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MT446387 (UNVERIFIED: Escherichia virus TH09, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

37. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK327944 (Escherichia phage vB_EcoM_G2540-3, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

38. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KX452694 (UNVERIFIED: Escherichia phage KPN1 genomic sequence) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

39. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK327936 (Escherichia phage vB_EcoM_G2540, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

40. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MN994497 (Phage NBEco003, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

41. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MH243439 (Escherichia phage vB_EcoM_NBG2, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

42. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK886800 (Escherichia phage EcNP1, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

43. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK373786 (Escherichia phage vB_EcoM_R5505, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

44. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LC348380 (Escherichia phage T2 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

45. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MT176424 (Citrobacter phage PhiZZ6, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

46. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to NC_027404 (Yersinia phage PST, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

47. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KT184312 (Enterobacteria phage Kha5h, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

48. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KF925357 (Escherichia phage HY01, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

49. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KR233165 (Escherichia phage PEC04, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

50. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK327942 (Escherichia phage vB_EcoM_G50, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

51. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MK327928 (Escherichia phage vB_EcoM_G2133, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

52. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to MT176426 (Serratia phage PhiZZ30, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

53. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KX452698 (UNVERIFIED: Shigella phage KPN5 genomic sequence) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

54. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KT184308 (Enterobacteria phage Aplg8, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

55. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to LN881729 (Escherichia phage slur04, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttgggttcaactggctgagga	Protospacer
 .*.**** **** ************* *.  

56. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to JN202312 (Enterobacteria phage ime09, complete genome) position: , mismatch: 9, identity: 0.719

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
gcgattcttgtttaggttcaactggctgaggg	Protospacer
 .*.**** **** ************* *.  

57. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 10, identity: 0.688

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
caacttctggctttggttcaaccggcttcttg	Protospacer
* . ******.***********.****.  . 

58. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to AJ131519 (Lactobacillus bacteriophage phi adh complete genome) position: , mismatch: 10, identity: 0.688

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
atggaactggttttggttcaactgatccggat	Protospacer
 ***  ******************...*.. .

59. spacer 1.2|1971690|32|NC_009802|PILER-CR matches to NC_000896 (Lactobacillus prophage phiadh, complete genome) position: , mismatch: 10, identity: 0.688

ctggttctggttttggttcaactggctcaacc	CRISPR spacer
atggaactggttttggttcaactgatccggat	Protospacer
 ***  ******************...*.. .